Probe	Grade	Type	Best Gene Model	All Gene Models	Design Target	UniProt	UniProtName	TAIR10	AtName	Rice	OsName	Medicago	MtName	biological_process	molecular_function	cellular_component
pt2_00001	A	A1S	Potri.016G098500	Potri.016G098500(AS)	POPTR_0001s00200	sp|Q9SR77|HBPL1_ARATH	Heme-binding-like protein At3g10130, chloroplastic OS=Arabidopsis thaliana GN=At3g10130 PE=1 SV=1	AT3G10130.1	| Symbols: | SOUL heme-binding family protein | chr3:3131122-3133158 REVERSE LENGTH=309	LOC_Os02g33020.1	protein|SOUL heme-binding protein, putative, expressed	NA	NA	GO:0008150|biological_process	NA	GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0010287|plastoglobule
pt2_00002	B	B1S	Potri.016G098400	Potri.016G098400(BS)	POPTR_0001s00210	sp|O04376|2A5B_ARATH	Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform OS=Arabidopsis thaliana GN=B'BETA PE=1 SV=1	AT3G09880.1	| Symbols: ATB' BETA | Protein phosphatase 2A regulatory B subunit family protein | chr3:3029902-3031931 FORWARD LENGTH=499	LOC_Os03g47790.1	protein|transposon protein, putative, unclassified, expressed	IMGA|Medtr1g011460.1	Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform chr1 2355347-2358219 E EGN_Mt100125 20111014	GO:0007165|signal transduction	GO:0008601|protein phosphatase type 2A regulator activity	GO:0000159|protein phosphatase type 2A complex GO:0005634|nucleus
pt2_00003	A	A1S	Potri.001G120000	Potri.001G120000(AS)	POPTR_0001s00220	sp|Q9FWX2|NAC7_ARATH	NAC domain-containing protein 7 OS=Arabidopsis thaliana GN=NAC007 PE=2 SV=2	AT1G12260.1	| Symbols: VND4, EMB2749, ANAC007, NAC007 | NAC 007 | chr1:4163058-4164486 REVERSE LENGTH=395	LOC_Os02g42970.1	protein|NAC domain containing protein, putative, expressed	IMGA|Medtr5g012080.1	NAC domain protein chr5 3331754-3333571 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009793|embryo development ending in seed dormancy GO:0044036|cell wall macromolecule metabolic process	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00004	A	A2S	Potri.001G120100	Potri.001G120100(AS) Potri.003G112900(DS)	POPTR_0001s00230	sp|Q8H1Q1|TL225_ARATH	Thylakoid lumenal protein At1g12250, chloroplastic OS=Arabidopsis thaliana GN=At1g12250 PE=1 SV=1	AT1G12250.2	| Symbols: | Pentapeptide repeat-containing protein | chr1:4159623-4161269 FORWARD LENGTH=206	LOC_Os02g42960.1	protein|thylakoid lumenal protein, putative, expressed	IMGA|Medtr5g012110.2	Thylakoid lumenal protein chr5 3342177-3340499 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005576|extracellular region GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009543|chloroplast thylakoid lumen GO:0009579|thylakoid
pt2_00005	A	A1S	Potri.001G120200	Potri.001G120200(AS)	POPTR_0001s00240	sp|O22152|YAB1_ARATH	Axial regulator YABBY 1 OS=Arabidopsis thaliana GN=YAB1 PE=1 SV=1	AT2G45190.1	| Symbols: AFO, FIL, YAB1 | Plant-specific transcription factor YABBY family protein | chr2:18628450-18630552 REVERSE LENGTH=229	LOC_Os04g45330.1	protein|YABBY domain containing protein, putative, expressed	IMGA|Medtr5g034030.1	Axial regulator YABBY chr5 14275693-14277568 H EGN_Mt100125 20111014	GO:0006333|chromatin assembly or disassembly GO:0009737|response to abscisic acid stimulus GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009909|regulation of flower development GO:0009933|meristem structural organization GO:0009944|polarity specification of adaxial/abaxial axis GO:0010027|thylakoid membrane organization GO:0010093|specification of floral organ identity GO:0010103|stomatal complex morphogenesis GO:0010154|fruit development GO:0010158|abaxial cell fate specification GO:0010159|specification of organ position GO:0010162|seed dormancy process GO:0010228|vegetative to reproductive phase transition of meristem GO:0010450|inflorescence meristem growth GO:0016226|iron-sulfur cluster assembly GO:0045165|cell fate commitment GO:0048481|ovule development	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_00006	A	A2S	Potri.001G120300	Potri.001G120300(AS) Potri.003G112700(DS)	POPTR_0001s00250	sp|Q9SU40|SKU5_ARATH	Monocopper oxidase-like protein SKU5 OS=Arabidopsis thaliana GN=SKU5 PE=1 SV=1	AT4G12420.2	| Symbols: SKU5 | Cupredoxin superfamily protein | chr4:7349941-7352868 REVERSE LENGTH=587	LOC_Os06g01490.1	protein|monocopper oxidase, putative, expressed	IMGA|Medtr5g018270.1	L-ascorbate oxidase-like protein chr5 6538701-6543083 F EGN_Mt100125 20111014	GO:0000271|polysaccharide biosynthetic process GO:0009825|multidimensional cell growth GO:0009932|cell tip growth GO:0010817|regulation of hormone levels GO:0016051|carbohydrate biosynthetic process GO:0030243|cellulose metabolic process GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0048765|root hair cell differentiation GO:0048767|root hair elongation GO:0055114|oxidation-reduction process GO:0071555|cell wall organization	GO:0005507|copper ion binding GO:0016491|oxidoreductase activity	GO:0005576|extracellular region GO:0005618|cell wall GO:0005774|vacuolar membrane GO:0005886|plasma membrane GO:0009505|plant-type cell wall GO:0009506|plasmodesma GO:0016020|membrane GO:0031225|anchored to membrane GO:0046658|anchored to plasma membrane GO:0048046|apoplast
pt2_00007	A	A1S	Potri.001G120400	Potri.001G120400(AS)	POPTR_0001s00260	sp|B0UV30|TAL_HAES2	Transaldolase OS=Haemophilus somnus (strain 2336) GN=tal PE=3 SV=1	AT1G12230.1	| Symbols: | Aldolase superfamily protein | chr1:4148050-4150708 FORWARD LENGTH=405	LOC_Os08g05830.1	protein|transaldolase, putative, expressed	NA	NA	GO:0005975|carbohydrate metabolic process GO:0006015|5-phosphoribose 1-diphosphate biosynthetic process GO:0006084|acetyl-CoA metabolic process GO:0009052|pentose-phosphate shunt, non-oxidative branch GO:0016126|sterol biosynthetic process GO:0016132|brassinosteroid biosynthetic process GO:0019344|cysteine biosynthetic process GO:0019658|glucose catabolic process to lactate and acetate	GO:0003824|catalytic activity GO:0004801|sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity GO:0008270|zinc ion binding	GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope
pt2_00008	A	A1S	Potri.001G120500	Potri.001G120500(AS)	POPTR_0001s00270	sp|Q9SUW0|TPPG_ARATH	Probable trehalose-phosphate phosphatase G OS=Arabidopsis thaliana GN=TPPG PE=2 SV=1	AT4G22590.1	| Symbols: TPPG | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr4:11893707-11895371 REVERSE LENGTH=377	LOC_Os10g40550.2	protein|CPuORF23 - conserved peptide uORF-containing transcript, expressed	IMGA|contig_64638_1.1	Trehalose 6-phosphate phosphatase contig_64638 1166-3461 E PREDN 20111014	GO:0005992|trehalose biosynthetic process GO:0008152|metabolic process	GO:0003824|catalytic activity GO:0004805|trehalose-phosphatase activity	GO:0005737|cytoplasm
pt2_00009	A	A1S	Potri.001G120600	Potri.001G120600(AS)	POPTR_0001s00280	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00010	A	A1S	Potri.005G139000	Potri.005G139000(AS)	POPTR_0001s00285	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00011	A	A1S	Potri.001G120700	Potri.001G120700(AS)	POPTR_0001s00290	NA	NA	AT4G22600.1	| Symbols: | unknown protein; Has 26 Blast hits to 26 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:11900211-11901032 REVERSE LENGTH=273	LOC_Os02g44250.1	protein|expressed protein	IMGA|contig_50934_1.1	Unknown protein contig_50934 1579-713 H PREDN 20111014	GO:0010584|pollen exine formation	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00012	B	B2S	Potri.001G120800	Potri.001G120800(BS) Potri.003G112200(DS)	POPTR_0001s00300	sp|Q8H038|KATAM_ORYSJ	Xyloglucan galactosyltransferase KATAMARI1 homolog OS=Oryza sativa subsp. japonica GN=Os03g0144800 PE=2 SV=1	AT4G22580.1	| Symbols: | Exostosin family protein | chr4:11889382-11890689 REVERSE LENGTH=435	LOC_Os10g40559.1	protein|exostosin family domain containing protein, expressed	IMGA|Medtr5g055350.1	Xyloglucan galactosyltransferase KATAMARI1 chr5 22252119-22253462 H EGN_Mt100125 20111014	NA	GO:0003824|catalytic activity	GO:0016020|membrane
pt2_00013	A	A1S	Potri.001G120900	Potri.001G120900(AS)	POPTR_0001s00310	sp|P49244|FABH1_CUPWR	3-oxoacyl-[acyl-carrier-protein] synthase 3 A, chloroplastic OS=Cuphea wrightii GN=KAS3A PE=2 SV=2	AT1G62640.2	| Symbols: KAS III | 3-ketoacyl-acyl carrier protein synthase III | chr1:23192502-23194737 FORWARD LENGTH=404	LOC_Os04g55060.1	protein|3-oxoacyl-synthase III, chloroplast precursor, putative, expressed	IMGA|Medtr5g009640.1	"beta-ketoacyl-acyl carrier protein synthase III, putative" chr5 2143615-2145784 H EGN_Mt100125 20111014	GO:0000038|very long-chain fatty acid metabolic process GO:0006084|acetyl-CoA metabolic process GO:0006633|fatty acid biosynthetic process GO:0008152|metabolic process GO:0008610|lipid biosynthetic process GO:0009409|response to cold GO:0016126|sterol biosynthetic process GO:0016132|brassinosteroid biosynthetic process GO:0042335|cuticle development	GO:0003824|catalytic activity GO:0004315|3-oxoacyl-[acyl-carrier-protein] synthase activity GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_00014	A	A1S	Potri.001G121000	Potri.001G121000(AS)	POPTR_0001s00320	sp|Q9FWW9|GSXL2_ARATH	Flavin-containing monooxygenase FMO GS-OX-like 2 OS=Arabidopsis thaliana GN=At1g12200 PE=2 SV=1	AT1G12200.1	| Symbols: | Flavin-binding monooxygenase family protein | chr1:4137627-4139835 FORWARD LENGTH=465	LOC_Os10g40570.1	protein|flavin-containing monooxygenase family protein, putative, expressed	IMGA|Medtr5g012130.1	Flavin-containing monooxygenase FMO GS-OX5 chr5 3350965-3347805 H EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0004497|monooxygenase activity GO:0004499|N,N-dimethylaniline monooxygenase activity GO:0050660|flavin adenine dinucleotide binding GO:0050661|NADP binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00015	A	A1S	Potri.001G121100	Potri.001G121100(AS)	POPTR_0001s00330	sp|Q94BV5|GSXL4_ARATH	Flavin-containing monooxygenase FMO GS-OX-like 4 OS=Arabidopsis thaliana GN=At1g62600 PE=2 SV=1	AT1G62600.1	| Symbols: | Flavin-binding monooxygenase family protein | chr1:23179542-23181411 FORWARD LENGTH=452	LOC_Os10g40570.1	protein|flavin-containing monooxygenase family protein, putative, expressed	IMGA|Medtr5g012130.1	Flavin-containing monooxygenase FMO GS-OX5 chr5 3350965-3347805 H EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0004497|monooxygenase activity GO:0004499|N,N-dimethylaniline monooxygenase activity GO:0050660|flavin adenine dinucleotide binding GO:0050661|NADP binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00016	A	A1S	Potri.001G121200	Potri.001G121200(AS)	POPTR_0001s00340	NA	NA	AT1G62530.2	| Symbols: | Plant protein of unknown function (DUF863) | chr1:23146332-23147386 REVERSE LENGTH=312	LOC_Os10g40580.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_00017	A	A2S	Potri.001G121300	Potri.001G121300(AS) Potri.003G111900(DS)	POPTR_0001s00350	sp|Q9SV15|WRK11_ARATH	Probable WRKY transcription factor 11 OS=Arabidopsis thaliana GN=WRKY11 PE=2 SV=2	AT4G31550.1	| Symbols: WRKY11, ATWRKY11 | WRKY DNA-binding protein 11 | chr4:15290065-15291458 REVERSE LENGTH=325	LOC_Os12g40570.2	protein|WRKY94, expressed	IMGA|Medtr1g009380.1	WRKY transcription factor chr1 1920992-1923320 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005516|calmodulin binding GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_00018	A	A1S	Potri.001G121400	Potri.001G121400(AS)	POPTR_0001s00360	sp|Q43199|APT1_WHEAT	Adenine phosphoribosyltransferase 1 OS=Triticum aestivum GN=APT1 PE=2 SV=1	AT4G22570.1	| Symbols: APT3 | adenine phosphoribosyl transferase 3 | chr4:11882310-11885250 REVERSE LENGTH=183	LOC_Os07g30150.1	protein|phosphoribosyl transferase, putative, expressed	IMGA|Medtr5g012210.1	Adenine phosphoribosyltransferase-like protein chr5 3374171-3378560 F EGN_Mt100125 20111014	GO:0006168|adenine salvage GO:0009116|nucleoside metabolic process	GO:0003999|adenine phosphoribosyltransferase activity	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_00019	A	A1S	Potri.001G121400	Potri.001G121400(AS)	POPTR_0001s00360	sp|Q43199|APT1_WHEAT	Adenine phosphoribosyltransferase 1 OS=Triticum aestivum GN=APT1 PE=2 SV=1	AT4G22570.1	| Symbols: APT3 | adenine phosphoribosyl transferase 3 | chr4:11882310-11885250 REVERSE LENGTH=183	LOC_Os07g30150.1	protein|phosphoribosyl transferase, putative, expressed	IMGA|Medtr5g012210.1	Adenine phosphoribosyltransferase-like protein chr5 3374171-3378560 F EGN_Mt100125 20111014	GO:0006168|adenine salvage GO:0009116|nucleoside metabolic process	GO:0003999|adenine phosphoribosyltransferase activity	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_00020	G	G1	NA	NA	POPTR_0001s00370	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00021	A	A1S	Potri.001G121600	Potri.001G121600(AS)	POPTR_0001s00380	NA	NA	AT4G22560.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G12450.1); Has 380 Blast hits to 380 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 6; Plants - 374; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:11880178-11880972 FORWARD LENGTH=264	LOC_Os02g44280.1	protein|zinc finger protein, putative, expressed	IMGA|Medtr5g012220.1	hypothetical protein chr5 3383612-3382740 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00022	A	A1S	Potri.001G121700	Potri.001G121700(AS)	POPTR_0001s00390	sp|Q940Y1|ORP2A_ARATH	Oxysterol-binding protein-related protein 2A OS=Arabidopsis thaliana GN=ORP2A PE=2 SV=1	AT4G22540.1	| Symbols: ORP2A | OSBP(oxysterol binding protein)-related protein 2A | chr4:11860969-11866108 REVERSE LENGTH=721	LOC_Os10g40590.1	protein|oxysterol-binding protein, putative, expressed	NA	NA	GO:0007165|signal transduction GO:0008202|steroid metabolic process	GO:0005543|phospholipid binding GO:0008142|oxysterol binding GO:0035091|phosphatidylinositol binding	GO:0005634|nucleus
pt2_00023	A	A1S	Potri.001G121700	Potri.001G121700(AS)	POPTR_0001s00390	sp|Q940Y1|ORP2A_ARATH	Oxysterol-binding protein-related protein 2A OS=Arabidopsis thaliana GN=ORP2A PE=2 SV=1	AT4G22540.1	| Symbols: ORP2A | OSBP(oxysterol binding protein)-related protein 2A | chr4:11860969-11866108 REVERSE LENGTH=721	LOC_Os10g40590.1	protein|oxysterol-binding protein, putative, expressed	NA	NA	GO:0007165|signal transduction GO:0008202|steroid metabolic process	GO:0005543|phospholipid binding GO:0008142|oxysterol binding GO:0035091|phosphatidylinositol binding	GO:0005634|nucleus
pt2_00024	A	A1S	Potri.001G121800	Potri.001G121800(AS)	POPTR_0001s00400	sp|P14009|14KD_DAUCA	14 kDa proline-rich protein DC2.15 OS=Daucus carota PE=2 SV=1	AT1G12100.1	| Symbols: | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr1:4095246-4095845 FORWARD LENGTH=132	LOC_Os03g01320.1	protein|LTPL116 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	IMGA|Medtr1g012700.1	14 kDa proline-rich protein DC2.15 chr1 3041200-3040682 E EGN_Mt100125 20111014	GO:0006869|lipid transport	GO:0008289|lipid binding	GO:0005576|extracellular region
pt2_00025	A	A3S	Potri.001G121900	Potri.001G121900(AS) Potri.T145400(AS) Potri.003G111400(DS)	POPTR_0001s00410	sp|P14009|14KD_DAUCA	14 kDa proline-rich protein DC2.15 OS=Daucus carota PE=2 SV=1	AT1G62510.1	| Symbols: | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr1:23136632-23137081 REVERSE LENGTH=149	LOC_Os03g01320.1	protein|LTPL116 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	IMGA|Medtr1g012630.1	14 kDa proline-rich protein DC2.15 chr1 3021443-3020811 I EGN_Mt100125 20111014	GO:0006869|lipid transport	GO:0008289|lipid binding	GO:0005576|extracellular region
pt2_00026	A	A1S	Potri.001G122000	Potri.001G122000(AS)	POPTR_0001s00415	NA	NA	AT4G12550.1	| Symbols: AIR1 | Auxin-Induced in Root cultures 1 | chr4:7439176-7439511 FORWARD LENGTH=111	NA	NA	NA	NA	GO:0006869|lipid transport GO:0009653|anatomical structure morphogenesis GO:0009733|response to auxin stimulus GO:0010102|lateral root morphogenesis GO:0048364|root development GO:0048527|lateral root development GO:0048589|developmental growth GO:0048765|root hair cell differentiation GO:0048767|root hair elongation GO:0048869|cellular developmental process	GO:0008289|lipid binding	GO:0005576|extracellular region
pt2_00027	A	A1S	Potri.001G122100	Potri.001G122100(AS)	POPTR_0001s00420	sp|Q8RW93|LBP65_ARATH	Putative lipid-binding protein At4g00165 OS=Arabidopsis thaliana GN=At4g00165 PE=2 SV=1	AT4G12480.1	| Symbols: pEARLI 1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr4:7406371-7406877 REVERSE LENGTH=168	LOC_Os10g40520.1	protein|LTPL145 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	IMGA|Medtr1g012700.1	14 kDa proline-rich protein DC2.15 chr1 3041200-3040682 E EGN_Mt100125 20111014	GO:0006869|lipid transport	NA	GO:0005575|cellular_component
pt2_00028	A	A1S	Potri.001G122200	Potri.001G122200(AS)	POPTR_0001s00430	sp|Q9FGK0|NDUB8_ARATH	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Arabidopsis thaliana GN=At5g47570 PE=2 SV=1	AT5G47570.1	| Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:19292869-19294666 REVERSE LENGTH=125	LOC_Os10g40410.2	protein|expressed protein	NA	NA	GO:0006511|ubiquitin-dependent protein catabolic process GO:0008150|biological_process GO:0009853|photorespiration GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	GO:0003674|molecular_function	GO:0005747|mitochondrial respiratory chain complex I
pt2_00029	A	A1S	Potri.001G122400	Potri.001G122400(AS)	POPTR_0001s00440	sp|P22989|LDHB_HORVU	L-lactate dehydrogenase B (Fragment) OS=Hordeum vulgare PE=1 SV=1	AT4G17260.1	| Symbols: | Lactate/malate dehydrogenase family protein | chr4:9674057-9675309 FORWARD LENGTH=353	LOC_Os02g01510.1	protein|lactate/malate dehydrogenase, putative, expressed	IMGA|Medtr5g012390.1	L-lactate dehydrogenase chr5 3463249-3461953 E EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0006096|glycolysis GO:0009651|response to salt stress GO:0009737|response to abscisic acid stimulus GO:0044262|cellular carbohydrate metabolic process GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0004457|lactate dehydrogenase activity GO:0004459|L-lactate dehydrogenase activity GO:0016491|oxidoreductase activity GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane
pt2_00030	A	A2S	Potri.T145300	Potri.T145300(AS) Potri.001G122500(BS)	POPTR_0001s00450	NA	NA	AT4G16510.1	| Symbols: | YbaK/aminoacyl-tRNA synthetase-associated domain | chr4:9302816-9304869 FORWARD LENGTH=232	LOC_Os02g44330.1	protein|rho guanine nucleotide exchange factor, putative, expressed	NA	NA	NA	GO:0003674|molecular_function	NA
pt2_00031	A	A1S	Potri.001G122600	Potri.001G122600(AS)	POPTR_0001s00460	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00032	A	A2S	Potri.001G122700	Potri.001G122700(AS) Potri.003G110900(DS)	POPTR_0001s00470	sp|Q8VYK7|ATG8F_ARATH	Autophagy-related protein 8f OS=Arabidopsis thaliana GN=ATG8F PE=2 SV=1	AT4G16520.2	| Symbols: ATG8F | Ubiquitin-like superfamily protein | chr4:9306882-9308113 REVERSE LENGTH=121	LOC_Os08g09240.2	protein|autophagy-related protein, putative, expressed	NA	NA	GO:0006914|autophagy	GO:0008017|microtubule binding	NA
pt2_00033	A	A1S	Potri.001G122800	Potri.001G122800(AS)	POPTR_0001s00480	sp|O81316|SCL6_ARATH	Scarecrow-like protein 6 OS=Arabidopsis thaliana GN=SCL6 PE=1 SV=1	AT4G00150.1	| Symbols: HAM3, ATHAM3, LOM3 | GRAS family transcription factor | chr4:57429-59105 REVERSE LENGTH=558	LOC_Os04g46860.1	protein|scarecrow, putative, expressed	IMGA|Medtr5g019750.1	GRAS family transcription factor chr5 7232386-7230690 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0007623|circadian rhythm GO:0010492|maintenance of shoot apical meristem identity GO:0030154|cell differentiation GO:0048768|root hair cell tip growth	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_00034	A	A1S	Potri.001G122900	Potri.001G122900(AS)	POPTR_0001s00490	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00035	A	A1S	Potri.001G123000	Potri.001G123000(AS)	POPTR_0001s00500	NA	NA	AT2G35736.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G25225.1). | chr2:15023084-15023254 REVERSE LENGTH=56	LOC_Os07g13534.1	protein|expressed protein	IMGA|Medtr5g012410.1	hypothetical protein chr5 3473142-3473339 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_00036	A	A1S	Potri.001G123100	Potri.001G123100(AS)	POPTR_0001s00510	NA	NA	AT5G47580.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:19294948-19297194 REVERSE LENGTH=748	NA	NA	NA	NA	GO:0006487|protein N-linked glycosylation GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_00037	B	B1S	Potri.003G110700	Potri.003G110700(BS)	POPTR_0001s00520	NA	NA	AT5G47580.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:19294948-19297194 REVERSE LENGTH=748	NA	NA	NA	NA	GO:0006914|autophagy GO:0010286|heat acclimation	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_00038	A	A1S	Potri.001G123200	Potri.001G123200(AS)	POPTR_0001s00530	NA	NA	AT4G16530.1	| Symbols: | Family of unknown function (DUF577) | chr4:9311355-9315554 FORWARD LENGTH=803	LOC_Os10g36340.2	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_00039	A	A1S	Potri.001G123300	Potri.001G123300(AS)	POPTR_0001s00540	NA	NA	AT4G19980.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: root, pedicel; EXPRESSED DURING: 4 anthesis; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:10828153-10828536 REVERSE LENGTH=127	NA	NA	IMGA|contig_74967_1.1	Unknown protein contig_74967 838-485 H PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_00040	A	A1S	Potri.001G123400	Potri.001G123400(AS)	POPTR_0001s00550	sp|Q9S775|PKL_ARATH	CHD3-type chromatin-remodeling factor PICKLE OS=Arabidopsis thaliana GN=PKL PE=1 SV=1	AT5G44800.1	| Symbols: CHR4, PKR1 | chromatin remodeling 4 | chr5:18083659-18092162 REVERSE LENGTH=2223	LOC_Os07g31450.1	protein|CHR4/MI-2-LIKE, putative, expressed	IMGA|Medtr5g090090.1	Chromodomain-helicase-DNA-binding protein chr5 38180814-38157967 E EGN_Mt100125 20111014	GO:0006333|chromatin assembly or disassembly	GO:0003676|nucleic acid binding GO:0003677|DNA binding GO:0003682|chromatin binding GO:0004386|helicase activity GO:0005524|ATP binding GO:0008270|zinc ion binding	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_00041	A	A1S	Potri.001G123500	Potri.001G123500(AS)	POPTR_0001s00560	sp|Q05609|CTR1_ARATH	Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana GN=CTR1 PE=1 SV=1	AT2G35050.1	| Symbols: | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain | chr2:14769708-14774796 FORWARD LENGTH=1257	LOC_Os07g25680.1	protein|protein kinase domain containing protein, expressed	IMGA|Medtr5g010730.1	Tyrosine-protein kinase Lyn chr5 2690961-2684872 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006486|protein glycosylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004712|protein serine/threonine/tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005575|cellular_component GO:0005634|nucleus GO:0005829|cytosol
pt2_00042	A	A1S	Potri.001G123600	Potri.001G123600(AS)	POPTR_0001s00570	sp|Q9C641|EFGM_ARATH	Elongation factor G, mitochondrial OS=Arabidopsis thaliana GN=At1g45332 PE=1 SV=1	AT1G45332.1	| Symbols: | Translation elongation factor EFG/EF2 protein | chr1:17172507-17176683 REVERSE LENGTH=754	LOC_Os03g36780.1	protein|elongation factor, putative, expressed	IMGA|Medtr5g083100.1	Elongation factor G chr5 34841961-34845519 I EGN_Mt100125 20111014	GO:0006414|translational elongation	GO:0003746|translation elongation factor activity GO:0003924|GTPase activity GO:0005524|ATP binding GO:0005525|GTP binding GO:0008135|translation factor activity, nucleic acid binding	GO:0005622|intracellular GO:0005739|mitochondrion
pt2_00043	A	A1S	Potri.001G123700	Potri.001G123700(AS)	POPTR_0001s00580	sp|O64769|POT11_ARATH	Potassium transporter 11 OS=Arabidopsis thaliana GN=POT11 PE=1 SV=1	AT2G35060.1	| Symbols: KUP11 | K+ uptake permease 11 | chr2:14775184-14778184 REVERSE LENGTH=792	LOC_Os04g52390.1	protein|potassium transporter, putative, expressed	IMGA|Medtr5g034500.1	Potassium transporter chr5 14551180-14556499 E EGN_Mt100125 20111014	GO:0006813|potassium ion transport GO:0009555|pollen development GO:0071805|potassium ion transmembrane transport	GO:0015079|potassium ion transmembrane transporter activity	GO:0005737|cytoplasm GO:0005886|plasma membrane GO:0016020|membrane
pt2_00044	A	A1S	Potri.001G123800	Potri.001G123800(AS)	POPTR_0001s00590	sp|O64769|POT11_ARATH	Potassium transporter 11 OS=Arabidopsis thaliana GN=POT11 PE=1 SV=1	AT2G35060.1	| Symbols: KUP11 | K+ uptake permease 11 | chr2:14775184-14778184 REVERSE LENGTH=792	LOC_Os04g52390.1	protein|potassium transporter, putative, expressed	IMGA|Medtr5g034500.1	Potassium transporter chr5 14551180-14556499 E EGN_Mt100125 20111014	GO:0006813|potassium ion transport GO:0009555|pollen development GO:0071805|potassium ion transmembrane transport	GO:0015079|potassium ion transmembrane transporter activity	GO:0005737|cytoplasm GO:0005886|plasma membrane GO:0016020|membrane
pt2_00045	A	A1S	Potri.001G123900	Potri.001G123900(AS)	POPTR_0001s00600	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00046	A	A2S	Potri.001G124000	Potri.001G124000(AS) Potri.003G109400(DS)	POPTR_0001s00610	sp|Q8VYC8|RIN2_ARATH	E3 ubiquitin protein ligase RIN2 OS=Arabidopsis thaliana GN=RIN2 PE=1 SV=1	AT4G25230.2	| Symbols: RIN2 | RPM1 interacting protein 2 | chr4:12924446-12928671 FORWARD LENGTH=578	LOC_Os07g30100.1	protein|RIN3, putative, expressed	IMGA|Medtr5g007710.1	E3 ubiquitin-protein ligase synoviolin chr5 1233249-1237930 E EGN_Mt100125 20111014	GO:0034052|positive regulation of plant-type hypersensitive response	GO:0004842|ubiquitin-protein ligase activity GO:0005515|protein binding GO:0008270|zinc ion binding	GO:0005886|plasma membrane
pt2_00047	A	A1S	Potri.001G124100	Potri.001G124100(AS)	POPTR_0001s00620	NA	NA	AT4G25225.1	| Symbols: | unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35736.2); Has 78 Blast hits to 78 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:12923086-12923256 REVERSE LENGTH=56	LOC_Os07g13534.1	protein|expressed protein	IMGA|Medtr5g012410.1	hypothetical protein chr5 3473142-3473339 H EGN_Mt100125 20111014	NA	NA	NA
pt2_00048	A	A1S	Potri.001G124200	Potri.001G124200(AS)	POPTR_0001s00630	sp|Q9C5L3|GLPT1_ARATH	Putative glycerol-3-phosphate transporter 1 OS=Arabidopsis thaliana GN=At3g47420 PE=2 SV=1	AT3G47420.1	| Symbols: ATPS3, PS3 | phosphate starvation-induced gene 3 | chr3:17472541-17474209 REVERSE LENGTH=523	LOC_Os04g46880.2	protein|transporter, major facilitator family, putative, expressed	NA	NA	GO:0008643|carbohydrate transport GO:0055062|phosphate ion homeostasis GO:0055085|transmembrane transport	GO:0005351|sugar:hydrogen symporter activity	GO:0016021|integral to membrane
pt2_00049	A	A1S	Potri.001G124300	Potri.001G124300(AS)	POPTR_0001s00640	sp|Q3SX41|LC7L3_BOVIN	Luc7-like protein 3 OS=Bos taurus GN=LUC7L3 PE=2 SV=1	AT5G51410.3	| Symbols: | LUC7 N_terminus domain-containing protein | chr5:20881821-20883577 REVERSE LENGTH=334	LOC_Os07g27300.2	protein|RNA-binding protein Luc7-like, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003723|RNA binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00050	A	A1S	Potri.001G124400	Potri.001G124400(AS)	POPTR_0001s00650	sp|Q7XU74|PX114_ORYSJ	Peroxisomal membrane protein 11-4 OS=Oryza sativa subsp. japonica GN=PEX11-4 PE=2 SV=2	AT3G47430.1	| Symbols: PEX11B | peroxin 11B | chr3:17480798-17481692 FORWARD LENGTH=227	LOC_Os04g45210.1	protein|peroxisomal biogenesis factor 11, putative, expressed	NA	NA	GO:0006098|pentose-phosphate shunt GO:0007031|peroxisome organization GO:0016559|peroxisome fission	GO:0003674|molecular_function GO:0005515|protein binding GO:0042802|identical protein binding	GO:0005777|peroxisome GO:0005778|peroxisomal membrane GO:0005779|integral to peroxisomal membrane
pt2_00051	A	A1S	Potri.001G124500	Potri.001G124500(AS)	POPTR_0001s00660	sp|B6SGC5|CNR6_MAIZE	Cell number regulator 6 OS=Zea mays GN=CNR6 PE=2 SV=1	AT5G51400.1	| Symbols: | PLAC8 family protein | chr5:20878784-20880036 REVERSE LENGTH=241	LOC_Os03g01210.2	protein|uncharacterized Cys-rich domain containing protein, putative, expressed	IMGA|Medtr5g065810.1	hypothetical protein chr5 26714435-26712911 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005886|plasma membrane
pt2_00052	A	A1S	Potri.001G124600	Potri.001G124600(AS)	POPTR_0001s00670	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00053	A	A2S	Potri.001G124700	Potri.001G124700(AS) Potri.003G108700(DS)	POPTR_0001s00680	NA	NA	NA	NA	NA	NA	NA	NA	NA	GO:0003777|microtubule motor activity	GO:0005737|cytoplasm GO:0005875|microtubule associated complex
pt2_00054	B	B1S	Potri.001G124800	Potri.001G124800(BS)	POPTR_0001s00690	sp|Q9STX9|TIP51_ARATH	Probable aquaporin TIP5-1 OS=Arabidopsis thaliana GN=TIP5-1 PE=2 SV=1	AT3G47440.1	| Symbols: TIP5;1 | tonoplast intrinsic protein 5;1 | chr3:17482054-17482987 FORWARD LENGTH=256	LOC_Os04g46490.1	protein|aquaporin protein, putative, expressed	IMGA|Medtr5g012810.1	Aquaporin TIP2-3 chr5 3671983-3673705 F EGN_Mt100125 20111014	GO:0006810|transport GO:0015840|urea transport GO:0048235|pollen sperm cell differentiation	GO:0005215|transporter activity GO:0015204|urea transmembrane transporter activity GO:0015250|water channel activity	GO:0005576|extracellular region GO:0005739|mitochondrion GO:0016020|membrane GO:0090406|pollen tube
pt2_00055	A	A1S	Potri.001G124900	Potri.001G124900(AS)	POPTR_0001s00700	sp|Q66GP9|NOS1_ARATH	Nitric oxide synthase 1 OS=Arabidopsis thaliana GN=NOS1 PE=1 SV=1	AT3G47450.2	| Symbols: ATNOS1, NOS1, ATNOA1, NOA1, RIF1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr3:17483195-17486249 REVERSE LENGTH=561	LOC_Os02g01440.1	protein|nitric oxide synthase 1, putative, expressed	NA	NA	GO:0006364|rRNA processing GO:0006399|tRNA metabolic process GO:0006655|phosphatidylglycerol biosynthetic process GO:0006809|nitric oxide biosynthetic process GO:0006897|endocytosis GO:0006979|response to oxidative stress GO:0009651|response to salt stress GO:0009657|plastid organization GO:0009658|chloroplast organization GO:0009793|embryo development ending in seed dormancy GO:0009902|chloroplast relocation GO:0009965|leaf morphogenesis GO:0010027|thylakoid membrane organization GO:0010193|response to ozone GO:0010228|vegetative to reproductive phase transition of meristem GO:0010322|regulation of isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0016226|iron-sulfur cluster assembly GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0030154|cell differentiation GO:0034660|ncRNA metabolic process GO:0042793|transcription from plastid promoter GO:0045893|positive regulation of transcription, DNA-dependent GO:0048366|leaf development GO:0048481|ovule development GO:0051246|regulation of protein metabolic process	GO:0003924|GTPase activity GO:0005525|GTP binding	GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_00056	A	A1S	Potri.001G125000	Potri.001G125000(AS)	POPTR_0001s00710	sp|Q9C5Y4|SMC21_ARATH	Structural maintenance of chromosomes protein 2-1 OS=Arabidopsis thaliana GN=SMC2-1 PE=2 SV=2	AT5G62410.1	| Symbols: SMC2, TTN3, ATCAP-E1, ATSMC4 | structural maintenance of chromosomes 2 | chr5:25056308-25062436 FORWARD LENGTH=1175	LOC_Os01g67740.1	protein|chromosome segregation protein, putative, expressed	IMGA|contig_11477_1.1	Structural maintenance of chromosomes contig_11477 340-2276 E PREDN 20111014	GO:0006260|DNA replication GO:0006261|DNA-dependent DNA replication GO:0006270|DNA replication initiation GO:0006275|regulation of DNA replication GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0006346|methylation-dependent chromatin silencing GO:0008283|cell proliferation GO:0009909|regulation of flower development GO:0010267|production of ta-siRNAs involved in RNA interference GO:0010389|regulation of G2/M transition of mitotic cell cycle GO:0016458|gene silencing GO:0016570|histone modification GO:0031047|gene silencing by RNA GO:0031048|chromatin silencing by small RNA GO:0034968|histone lysine methylation GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0048449|floral organ formation GO:0051276|chromosome organization GO:0051567|histone H3-K9 methylation GO:0051607|defense response to virus GO:0051726|regulation of cell cycle	GO:0005215|transporter activity GO:0005524|ATP binding	GO:0000796|condensin complex GO:0005634|nucleus GO:0005694|chromosome
pt2_00057	A	A1S	Potri.001G125200	Potri.001G125200(AS)	POPTR_0001s00720	NA	NA	AT3G24080.2	| Symbols: | KRR1 family protein | chr3:8695191-8697107 REVERSE LENGTH=630	LOC_Os05g41100.1	protein|protein kri1, putative, expressed	NA	NA	NA	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005829|cytosol
pt2_00058	A	A1S	Potri.001G125300	Potri.001G125300(AS)	POPTR_0001s00730	sp|A0JP85|CNOT1_XENTR	CCR4-NOT transcription complex subunit 1 OS=Xenopus tropicalis GN=cnot1 PE=2 SV=1	AT1G02080.2	| Symbols: | transcription regulators | chr1:373694-386682 FORWARD LENGTH=2377	LOC_Os10g40780.3	protein|CCR4-Not complex component, Not1domain containing protein, expressed	NA	NA	GO:0000226|microtubule cytoskeleton organization GO:0007155|cell adhesion GO:0010090|trichome morphogenesis GO:0045010|actin nucleation	NA	GO:0005829|cytosol GO:0016020|membrane
pt2_00059	A	A1S	Potri.001G125400	Potri.001G125400(AS)	POPTR_0001s00750	sp|Q0PGJ6|AKRC9_ARATH	Aldo-keto reductase family 4 member C9 OS=Arabidopsis thaliana GN=AKR4C9 PE=1 SV=1	AT5G62420.1	| Symbols: | NAD(P)-linked oxidoreductase superfamily protein | chr5:25064835-25066111 FORWARD LENGTH=316	LOC_Os03g13390.2	protein|oxidoreductase, aldo/keto reductase family protein, putative, expressed	IMGA|Medtr5g097940.1	Reductase chr5 41850889-41852347 F EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity	GO:0005737|cytoplasm
pt2_00060	B	B1S	Potri.001G125500	Potri.001G125500(BS)	POPTR_0001s00760	NA	NA	AT1G76520.2	| Symbols: | Auxin efflux carrier family protein | chr1:28715384-28717289 FORWARD LENGTH=390	LOC_Os09g31478.1	protein|auxin efflux carrier component, putative, expressed	IMGA|Medtr5g024970.1	Auxin efflux carrier protein chr5 9837511-9840517 F EGN_Mt100125 20111014	GO:0009926|auxin polar transport GO:0055085|transmembrane transport	GO:0009672|auxin:hydrogen symporter activity	GO:0016021|integral to membrane
pt2_00061	A	A1S	Potri.001G125600	Potri.001G125600(AS)	POPTR_0001s00770	sp|P42654|1433B_VICFA	14-3-3-like protein B OS=Vicia faba PE=2 SV=1	AT2G42590.2	| Symbols: GRF9, GF14 MU | general regulatory factor 9 | chr2:17732118-17733775 REVERSE LENGTH=262	LOC_Os08g33370.1	protein|14-3-3 protein, putative, expressed	IMGA|Medtr5g044160.1	14-3-3-like protein GF14 iota chr5 18998222-19001446 F EGN_Mt100125 20111014	GO:0006096|glycolysis GO:0006833|water transport GO:0006972|hyperosmotic response GO:0007030|Golgi organization GO:0009266|response to temperature stimulus GO:0009651|response to salt stress GO:0009750|response to fructose stimulus GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019344|cysteine biosynthetic process GO:0032880|regulation of protein localization GO:0042744|hydrogen peroxide catabolic process GO:0046686|response to cadmium ion GO:0048528|post-embryonic root development	GO:0005509|calcium ion binding GO:0019904|protein domain specific binding GO:0045309|protein phosphorylated amino acid binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane GO:0009570|chloroplast stroma
pt2_00062	A	A2S	Potri.001G125700	Potri.001G125700(AS) Potri.003G108000(DS)	POPTR_0001s00780	sp|Q8U4K7|PGK2_PYRFU	2-phosphoglycerate kinase OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=pgk2 PE=3 SV=1	AT5G61450.1	| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:24710240-24712882 REVERSE LENGTH=447	LOC_Os07g28260.6	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00063	A	A1S	Potri.001G125800	Potri.001G125800(AS)	POPTR_0001s00790	sp|Q8VYT5|FB254_ARATH	F-box protein At5g07670 OS=Arabidopsis thaliana GN=At5g07670 PE=2 SV=1	AT5G07670.1	| Symbols: | RNI-like superfamily protein | chr5:2430421-2432065 FORWARD LENGTH=476	LOC_Os02g44104.1	protein|F-box family protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00064	C	C1S	Potri.001G125900	Potri.001G125900(CS)	sp|Q9M202|ZAT9_ARATH	Zinc finger protein ZAT9 OS=Arabidopsis thaliana GN=ZAT9 PE=2 SV=1	AT3G60580.1	| Symbols: | C2H2-like zinc finger protein | chr3:22394007-22394873 FORWARD LENGTH=288	LOC_Os10g40660.1	protein|ZOS10-07 - C2H2 zinc finger protein, expressed	IMGA|Medtr1g106730.1	Zinc finger protein chr1 31397508-31398593 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003676|nucleic acid binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_00065	A	A1S	Potri.001G126000	Potri.001G126000(AS)	POPTR_0001s00810	NA	NA	AT4G25190.1	| Symbols: QWRF7 | Family of unknown function (DUF566) | chr4:12914400-12916001 REVERSE LENGTH=394	LOC_Os10g40620.1	protein|expressed protein	IMGA|Medtr1g018440.1	hypothetical protein chr1 5485437-5481464 H EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005634|nucleus
pt2_00066	A	A1S	Potri.001G126100	Potri.001G126100(AS)	POPTR_0001s00820	sp|Q9FII5|TDR_ARATH	Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana GN=TDR PE=1 SV=1	AT5G61480.1	| Symbols: PXY | Leucine-rich repeat protein kinase family protein | chr5:24724541-24727842 REVERSE LENGTH=1041	LOC_Os08g05290.1	protein|receptor-like protein kinase 5 precursor, putative, expressed	IMGA|contig_53710_1.1	Receptor-like protein kinase contig_53710 698-4054 H PREDN 20111014	GO:0006468|protein phosphorylation GO:0009855|determination of bilateral symmetry GO:0009887|organ morphogenesis GO:0009944|polarity specification of adaxial/abaxial axis GO:0010014|meristem initiation GO:0010051|xylem and phloem pattern formation GO:0010067|procambium histogenesis GO:0010073|meristem maintenance GO:0010075|regulation of meristem growth GO:0010089|xylem development GO:0010223|secondary shoot formation GO:0048439|flower morphogenesis GO:0048519|negative regulation of biological process	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005515|protein binding GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_00067	A	A1S	Potri.001G126200	Potri.001G126200(AS)	POPTR_0001s00830	sp|Q54IV7|RFT1_DICDI	Protein RFT1 homolog OS=Dictyostelium discoideum GN=rft1 PE=3 SV=1	AT5G07630.1	| Symbols: | lipid transporters | chr5:2410703-2414523 FORWARD LENGTH=611	LOC_Os07g30250.1	protein|RFT1, putative, expressed	IMGA|contig_63354_3.1	Nuclear division RFT1-like protein contig_63354 5648-6260 F PREDN 20111014	GO:0000280|nuclear division GO:0006869|lipid transport	GO:0005319|lipid transporter activity	GO:0016020|membrane GO:0016021|integral to membrane
pt2_00068	A	A1S	Potri.001G126300	Potri.001G126300(AS)	POPTR_0001s00840	NA	NA	AT4G25170.1	| Symbols: | Uncharacterised conserved protein (UCP012943) | chr4:12909740-12911389 FORWARD LENGTH=344	LOC_Os02g44010.2	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_00069	A	A1S	Potri.001G126400	Potri.001G126400(AS)	POPTR_0001s00850	sp|P0CO44|BBP_CRYNJ	Branchpoint-bridging protein OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=BBP PE=3 SV=1	AT5G51300.3	| Symbols: | splicing factor-related | chr5:20849881-20852295 REVERSE LENGTH=804	LOC_Os04g31620.1	protein|retrotransposon protein, putative, unclassified, expressed	IMGA|Medtr5g075710.3	KH domain-containing protein chr5 31223217-31220331 F EGN_Mt100125 20111014	GO:0000398|mRNA splicing, via spliceosome GO:0008380|RNA splicing	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_00070	A	A2S	Potri.T173300	Potri.T173300(AS) Potri.001G126500(AS)	POPTR_0001s00860	sp|Q0WWQ1|ATG3_ARATH	Autophagy-related protein 3 OS=Arabidopsis thaliana GN=ATG3 PE=2 SV=2	AT5G61500.1	| Symbols: ATATG3, ATG3 | autophagy 3 (APG3) | chr5:24734216-24736711 REVERSE LENGTH=313	LOC_Os01g10290.2	protein|autophagy-related protein 3, putative, expressed	IMGA|contig_60121_1.1	Autophagy-related protein contig_60121 880-2716 E PREDN 20111014	GO:0000902|cell morphogenesis GO:0006623|protein targeting to vacuole GO:0006914|autophagy GO:0016049|cell growth GO:0016192|vesicle-mediated transport GO:0048193|Golgi vesicle transport	GO:0003674|molecular_function	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_00071	C	C1S	Potri.001G126600	Potri.001G126600(CS)	NA	NA	AT4G23340.1	| Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr4:12195719-12196793 REVERSE LENGTH=324	NA	NA	NA	NA	GO:0009686|gibberellin biosynthetic process GO:0048767|root hair elongation GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	NA
pt2_00072	A	A1S	Potri.001G126700	Potri.001G126700(AS)	POPTR_0001s00880	sp|Q0A5W2|BIOF_ALHEH	8-amino-7-oxononanoate synthase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=bioF PE=3 SV=1	AT5G04620.2	| Symbols: ATBIOF, BIOF | biotin F | chr5:1327292-1329934 FORWARD LENGTH=476	LOC_Os01g53450.1	protein|aminotransferase, classes I and II, domain containing protein, expressed	NA	NA	GO:0009058|biosynthetic process GO:0009102|biotin biosynthetic process	GO:0003824|catalytic activity GO:0008483|transaminase activity GO:0008710|8-amino-7-oxononanoate synthase activity GO:0016740|transferase activity GO:0030170|pyridoxal phosphate binding	GO:0005739|mitochondrion GO:0005829|cytosol
pt2_00073	G	G1	NA	NA	POPTR_0001s00890	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00074	A	A1S	Potri.001G126900	Potri.001G126900(AS)	POPTR_0001s00900	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00075	A	A1S	Potri.001G127000	Potri.001G127000(AS)	POPTR_0001s00910	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00076	A	A1S	Potri.001G127100	Potri.001G127100(AS)	POPTR_0001s00920	sp|Q9SJJ7|ATL57_ARATH	RING-H2 finger protein ATL57 OS=Arabidopsis thaliana GN=ATL57 PE=2 SV=1	AT5G45290.1	| Symbols: | RING/U-box superfamily protein | chr5:18350011-18352092 REVERSE LENGTH=545	LOC_Os05g32350.1	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr5g026260.1	RING finger protein chr5 10530462-10526071 E EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_00077	C	C1S	Potri.001G127200	Potri.001G127200(CS)	NA	NA	NA	NA	NA	NA	NA	NA	GO:0042545|cell wall modification	GO:0004857|enzyme inhibitor activity GO:0030599|pectinesterase activity	GO:0005576|extracellular region GO:0005618|cell wall GO:0009505|plant-type cell wall GO:0016020|membrane
pt2_00078	A	A1S	Potri.001G127300	Potri.001G127300(AS)	POPTR_0001s00940	sp|Q93ZY2|ROGF1_ARATH	Rop guanine nucleotide exchange factor 1 OS=Arabidopsis thaliana GN=ROPGEF1 PE=1 SV=2	AT1G31650.1	| Symbols: ATROPGEF14, ROPGEF14 | RHO guanyl-nucleotide exchange factor 14 | chr1:11326474-11329767 REVERSE LENGTH=576	LOC_Os02g47420.3	protein|ATROPGEF7/ROPGEF7, putative, expressed	IMGA|Medtr5g025960.1	Rop guanine nucleotide exchange factor chr5 10363379-10356920 F EGN_Mt100125 20111014	GO:0019344|cysteine biosynthetic process	GO:0005089|Rho guanyl-nucleotide exchange factor activity	GO:0005739|mitochondrion
pt2_00079	A	A1S	Potri.001G127400	Potri.001G127400(AS)	POPTR_0001s00950	sp|Q8GT20|BEBT_TOBAC	Benzyl alcohol O-benzoyltransferase OS=Nicotiana tabacum GN=HSR201 PE=1 SV=1	AT5G17540.1	| Symbols: | HXXXD-type acyl-transferase family protein | chr5:5782061-5783682 REVERSE LENGTH=461	LOC_Os10g35950.1	protein|transferase family protein, putative, expressed	IMGA|Medtr5g076700.1	Benzoyl coenzyme A benzyl alcohol benzoyl transferase chr5 31729976-31732699 H EGN_Mt100125 20111014	NA	GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_00080	A	A1S	Potri.001G127500	Potri.001G127500(AS)	POPTR_0001s00960	sp|P83326|PMEI_ACTDE	Pectinesterase inhibitor OS=Actinidia deliciosa GN=PMEI PE=1 SV=2	AT4G02250.1	| Symbols: | Plant invertase/pectin methylesterase inhibitor superfamily protein | chr4:983970-984523 FORWARD LENGTH=160	LOC_Os01g20970.1	protein|invertase/pectin methylesterase inhibitor family protein, putative, expressed	NA	NA	NA	GO:0004857|enzyme inhibitor activity GO:0030599|pectinesterase activity GO:0046910|pectinesterase inhibitor activity	NA
pt2_00081	A	A1S	Potri.001G127600	Potri.001G127600(AS)	POPTR_0001s00970	sp|Q8GT20|BEBT_TOBAC	Benzyl alcohol O-benzoyltransferase OS=Nicotiana tabacum GN=HSR201 PE=1 SV=1	AT5G17540.1	| Symbols: | HXXXD-type acyl-transferase family protein | chr5:5782061-5783682 REVERSE LENGTH=461	LOC_Os10g35950.1	protein|transferase family protein, putative, expressed	IMGA|Medtr5g076700.1	Benzoyl coenzyme A benzyl alcohol benzoyl transferase chr5 31729976-31732699 H EGN_Mt100125 20111014	NA	GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_00082	A	A1S	Potri.001G127700	Potri.001G127700(AS)	POPTR_0001s00990	sp|Q94B74|NUDT2_ARATH	Nudix hydrolase 2 OS=Arabidopsis thaliana GN=NUDT2 PE=1 SV=1	AT5G47650.1	| Symbols: ATNUDT2, ATNUDX2, NUDT2 | nudix hydrolase homolog 2 | chr5:19310391-19312084 REVERSE LENGTH=278	LOC_Os06g42790.2	protein|hydrolase, NUDIX family, domain containing protein, expressed	NA	NA	GO:0000165|MAPK cascade GO:0002679|respiratory burst involved in defense response GO:0002831|regulation of response to biotic stimulus GO:0006612|protein targeting to membrane GO:0006944|cellular membrane fusion GO:0006950|response to stress GO:0006979|response to oxidative stress GO:0009409|response to cold GO:0009595|detection of biotic stimulus GO:0009611|response to wounding GO:0009626|plant-type hypersensitive response GO:0009627|systemic acquired resistance GO:0009651|response to salt stress GO:0009697|salicylic acid biosynthetic process GO:0009738|abscisic acid mediated signaling pathway GO:0009814|defense response, incompatible interaction GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009870|defense response signaling pathway, resistance gene-dependent GO:0010193|response to ozone GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0010581|regulation of starch biosynthetic process GO:0019684|photosynthesis, light reaction GO:0030968|endoplasmic reticulum unfolded protein response GO:0031348|negative regulation of defense response GO:0035556|intracellular signal transduction GO:0042742|defense response to bacterium GO:0043069|negative regulation of programmed cell death GO:0043900|regulation of multi-organism process GO:0045087|innate immune response GO:0050832|defense response to fungus GO:0051707|response to other organism GO:0070212|protein poly-ADP-ribosylation	GO:0000210|NAD+ diphosphatase activity GO:0005515|protein binding GO:0016787|hydrolase activity GO:0017110|nucleoside-diphosphatase activity GO:0047631|ADP-ribose diphosphatase activity GO:0051287|NAD binding GO:0080041|ADP-ribose pyrophosphohydrolase activity GO:0080042|ADP-glucose pyrophosphohydrolase activity	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane
pt2_00083	A	A1S	Potri.001G127800	Potri.001G127800(AS)	POPTR_0001s01000	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00084	A	A1S	Potri.001G127900	Potri.001G127900(AS)	POPTR_0001s01010	NA	NA	AT4G27870.1	| Symbols: | Vacuolar iron transporter (VIT) family protein | chr4:13878983-13882679 FORWARD LENGTH=761	LOC_Os06g01440.1	protein|integral membrane protein, putative, expressed	IMGA|Medtr5g068580.1	Integral membrane protein-like protein chr5 28055302-28049489 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0016020|membrane GO:0016021|integral to membrane
pt2_00085	A	A1S	Potri.001G128100	Potri.001G128100(AS)	POPTR_0001s01020	sp|Q8GSM7|HCT_TOBAC	Hydroxycinnamoyl-Coenzyme A shikimate/quinate hydroxycinnamoyltransferase OS=Nicotiana tabacum GN=HCT PE=1 SV=1	AT1G31490.1	| Symbols: | HXXXD-type acyl-transferase family protein | chr1:11271744-11273078 REVERSE LENGTH=444	LOC_Os01g15709.1	protein|transferase family protein, putative, expressed	IMGA|Medtr5g026320.1	Omega-hydroxypalmitate O-feruloyl transferase chr5 10563439-10564838 E EGN_Mt100125 20111014	GO:0009308|amine metabolic process GO:0055114|oxidation-reduction process	GO:0005507|copper ion binding GO:0008131|primary amine oxidase activity GO:0016740|transferase activity GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups GO:0048038|quinone binding	GO:0005737|cytoplasm GO:0009507|chloroplast
pt2_00086	A	A1S	Potri.001G128200	Potri.001G128200(AS)	POPTR_0001s01040	NA	NA	AT4G19450.1	| Symbols: | Major facilitator superfamily protein | chr4:10606538-10609218 FORWARD LENGTH=572	LOC_Os12g01570.1	protein|nodulin, putative, expressed	IMGA|Medtr5g026350.1	hypothetical protein chr5 10578687-10583023 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_00087	A	A1S	Potri.001G128300	Potri.001G128300(AS)	POPTR_0001s01050	sp|D1BZ82|MSHA_XYLCX	D-inositol 3-phosphate glycosyltransferase OS=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) GN=mshA PE=3 SV=1	AT4G19460.1	| Symbols: | UDP-Glycosyltransferase superfamily protein | chr4:10610422-10611972 REVERSE LENGTH=516	LOC_Os01g46430.1	protein|glycosyl transferase, group 1 domain containing protein, expressed	IMGA|Medtr5g026360.1	Capsular polysaccharide biosynthesis glycosyltransferase capM chr5 10585028-10583568 H EGN_Mt100125 20111014	GO:0001666|response to hypoxia GO:0009058|biosynthetic process GO:0019375|galactolipid biosynthetic process	GO:0016757|transferase activity, transferring glycosyl groups	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00088	A	A1S	Potri.001G128400	Potri.001G128400(AS)	POPTR_0001s01060	sp|Q9C9H7|RLP12_ARATH	Receptor-like protein 12 OS=Arabidopsis thaliana GN=RLP12 PE=2 SV=2	AT1G45616.1	| Symbols: AtRLP6, RLP6 | receptor like protein 6 | chr1:17183550-17186534 REVERSE LENGTH=994	LOC_Os04g40440.1	protein|expressed protein	IMGA|Medtr5g046350.1	Receptor-like protein kinase chr5 19911154-19914497 H EGN_Mt100125 20111014	GO:0002237|response to molecule of bacterial origin GO:0006952|defense response GO:0007165|signal transduction GO:0010103|stomatal complex morphogenesis GO:0048443|stamen development	NA	GO:0016020|membrane
pt2_00089	A	A1S	Potri.001G128500	Potri.001G128500(AS)	POPTR_0001s01070	sp|Q8GXZ3|Y5102_ARATH	Serine/threonine-protein kinase At5g01020 OS=Arabidopsis thaliana GN=At5g01020 PE=1 SV=1	AT1G61590.1	| Symbols: | Protein kinase superfamily protein | chr1:22723691-22726022 REVERSE LENGTH=424	LOC_Os03g24930.1	protein|tyrosine protein kinase domain containing protein, putative, expressed	IMGA|Medtr5g026370.1	Protein kinase 2B chr5 10589195-10586952 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	NA
pt2_00090	A	A1S	Potri.001G128600	Potri.001G128600(AS)	POPTR_0001s01080	NA	NA	AT1G31460.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23270.1); Has 1251 Blast hits to 756 proteins in 185 species: Archae - 0; Bacteria - 295; Metazoa - 374; Fungi - 176; Plants - 58; Viruses - 17; Other Eukaryotes - 331 (source: NCBI BLink). | chr1:11261705-11262610 REVERSE LENGTH=301	NA	NA	IMGA|Medtr5g026390.1	hypothetical protein chr5 10595425-10596544 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_00091	A	A1S	Potri.001G128700	Potri.001G128700(AS)	POPTR_0001s01090	sp|Q9ZPR1|CD48B_ARATH	Cell division control protein 48 homolog B OS=Arabidopsis thaliana GN=CDC48B PE=2 SV=1	AT2G03670.1	| Symbols: CDC48B | cell division cycle 48B | chr2:1117595-1120361 FORWARD LENGTH=603	LOC_Os04g42110.1	protein|cell division control protein 48 homolog B, putative, expressed	IMGA|Medtr1g083330.1	26S protease regulatory subunit 6A-like protein chr1 21592984-21597408 F EGN_Mt100125 20111014	GO:0009560|embryo sac egg cell differentiation	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity	GO:0005886|plasma membrane
pt2_00092	A	A1S	Potri.001G128800	Potri.001G128800(AS)	POPTR_0001s01100	NA	NA	AT4G34660.1	| Symbols: | SH3 domain-containing protein | chr4:16545595-16548294 REVERSE LENGTH=368	LOC_Os03g16000.1	protein|src homology-3 domain protein 3, putative, expressed	IMGA|Medtr5g026400.1	Rho guanine nucleotide exchange factor chr5 10603873-10598440 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0030276|clathrin binding	GO:0005829|cytosol
pt2_00093	A	A1S	Potri.001G128900	Potri.001G128900(AS)	POPTR_0001s01110	NA	NA	AT1G31410.1	| Symbols: | putrescine-binding periplasmic protein-related | chr1:11247094-11249345 REVERSE LENGTH=524	LOC_Os04g51310.1	protein|putrescine-binding periplasmic protein-related, putative, expressed	NA	NA	GO:0006810|transport	GO:0005215|transporter activity	GO:0005634|nucleus GO:0009941|chloroplast envelope
pt2_00094	A	A1S	Potri.001G129000	Potri.001G129000(AS)	POPTR_0001s01120	sp|C0LGF4|FEI1_ARATH	LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1	AT1G31420.2	| Symbols: FEI1 | Leucine-rich repeat protein kinase family protein | chr1:11250360-11253516 FORWARD LENGTH=591	LOC_Os03g16010.1	protein|BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	IMGA|Medtr5g026510.1	LRR receptor-like serine/threonine-protein kinase FEI chr5 10652878-10642878 E EGN_Mt100125 20111014	GO:0000271|polysaccharide biosynthetic process GO:0000272|polysaccharide catabolic process GO:0005982|starch metabolic process GO:0006468|protein phosphorylation GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway GO:0009664|plant-type cell wall organization GO:0009825|multidimensional cell growth GO:0009826|unidimensional cell growth GO:0009932|cell tip growth GO:0010817|regulation of hormone levels GO:0016049|cell growth GO:0019761|glucosinolate biosynthetic process GO:0030243|cellulose metabolic process GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0046777|protein autophosphorylation GO:0048767|root hair elongation GO:0071555|cell wall organization	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_00095	C	C1S	Potri.001G129000	Potri.001G129000(CS)	sp|C0LGF4|FEI1_ARATH	LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1	AT1G31420.2	| Symbols: FEI1 | Leucine-rich repeat protein kinase family protein | chr1:11250360-11253516 FORWARD LENGTH=591	LOC_Os03g16010.1	protein|BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	IMGA|Medtr5g026510.1	LRR receptor-like serine/threonine-protein kinase FEI chr5 10652878-10642878 E EGN_Mt100125 20111014	GO:0000271|polysaccharide biosynthetic process GO:0000272|polysaccharide catabolic process GO:0005982|starch metabolic process GO:0006468|protein phosphorylation GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway GO:0009664|plant-type cell wall organization GO:0009825|multidimensional cell growth GO:0009826|unidimensional cell growth GO:0009932|cell tip growth GO:0010817|regulation of hormone levels GO:0016049|cell growth GO:0019761|glucosinolate biosynthetic process GO:0030243|cellulose metabolic process GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0046777|protein autophosphorylation GO:0048767|root hair elongation GO:0071555|cell wall organization	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_00096	A	A1S	Potri.001G129100	Potri.001G129100(AS)	POPTR_0001s01130	sp|P41091|IF2G_HUMAN	Eukaryotic translation initiation factor 2 subunit 3 OS=Homo sapiens GN=EIF2S3 PE=1 SV=3	AT1G04170.1	| Symbols: EIF2 GAMMA | eukaryotic translation initiation factor 2 gamma subunit | chr1:1097423-1099702 FORWARD LENGTH=465	LOC_Os12g41400.1	protein|eukaryotic translation initiation factor 2 subunit gamma, putative, expressed	NA	NA	GO:0009220|pyrimidine ribonucleotide biosynthetic process	GO:0003743|translation initiation factor activity GO:0003924|GTPase activity GO:0005525|GTP binding GO:0008135|translation factor activity, nucleic acid binding	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_00097	A	A1S	Potri.001G129200	Potri.001G129200(AS)	POPTR_0001s01140	sp|Q9SFC7|FB135_ARATH	F-box protein At3g07870 OS=Arabidopsis thaliana GN=At3g07870 PE=2 SV=1	AT3G07870.1	| Symbols: | F-box and associated interaction domains-containing protein | chr3:2510871-2512124 FORWARD LENGTH=417	NA	NA	IMGA|Medtr5g027370.1	F-box family protein chr5 11126676-11125166 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_00098	A	A1S	Potri.001G129300	Potri.001G129300(AS)	POPTR_0001s01150	NA	NA	AT4G28050.1	| Symbols: TET7 | tetraspanin7 | chr4:13942566-13943621 REVERSE LENGTH=263	LOC_Os08g34460.1	protein|tetraspanin family protein, putative, expressed	IMGA|Medtr5g030070.1	hypothetical protein chr5 12391997-12393827 F EGN_Mt100125 20111014	GO:0007020|microtubule nucleation GO:0007568|aging	GO:0003674|molecular_function	GO:0005576|extracellular region GO:0009506|plasmodesma GO:0016021|integral to membrane
pt2_00099	A	A1S	Potri.001G129400	Potri.001G129400(AS)	POPTR_0001s01160	sp|Q9SU30|CPR30_ARATH	F-box protein CPR30 OS=Arabidopsis thaliana GN=CPR30 PE=1 SV=2	AT4G12560.2	| Symbols: CPR30 | F-box and associated interaction domains-containing protein | chr4:7441815-7443157 FORWARD LENGTH=413	LOC_Os01g24810.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g027370.1	F-box family protein chr5 11126676-11125166 E EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	NA
pt2_00100	A	A1S	Potri.001G129500	Potri.001G129500(AS)	POPTR_0001s01165	NA	NA	NA	NA	LOC_Os02g39580.1	protein|ZOS2-12 - C2H2 zinc finger protein, expressed	IMGA|Medtr5g026530.1	Zinc finger protein chr5 10658596-10662318 F EGN_Mt100125 20111014	NA	NA	NA
pt2_00101	A	A1S	Potri.001G129600	Potri.001G129600(AS)	POPTR_0001s01170	sp|Q9F234|AGL2_BACTQ	Alpha-glucosidase 2 OS=Bacillus thermoamyloliquefaciens PE=3 SV=1	AT3G23640.2	| Symbols: HGL1 | heteroglycan glucosidase 1 | chr3:8502355-8509358 FORWARD LENGTH=991	LOC_Os07g23880.1	protein|glycosyl hydrolase, family 31, putative, expressed	IMGA|Medtr5g026610.1	Alpha glucosidase-like protein chr5 10709549-10721864 E EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0005634|nucleus GO:0009507|chloroplast
pt2_00102	A	A1S	Potri.001G129700	Potri.001G129700(AS)	POPTR_0001s01180	sp|Q9C801|MOS2_ARATH	Protein MOS2 OS=Arabidopsis thaliana GN=MOS2 PE=2 SV=1	AT1G33520.1	| Symbols: MOS2 | D111/G-patch domain-containing protein | chr1:12157488-12158876 REVERSE LENGTH=462	LOC_Os03g14860.1	protein|G-patch domain containing protein, expressed	NA	NA	GO:0009870|defense response signaling pathway, resistance gene-dependent GO:0042742|defense response to bacterium	GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005634|nucleus
pt2_00103	A	A1S	Potri.001G129800	Potri.001G129800(AS)	POPTR_0001s01190	NA	NA	AT5G07840.1	| Symbols: | Ankyrin repeat family protein | chr5:2506764-2507291 REVERSE LENGTH=175	LOC_Os02g01245.1	protein|expressed protein	IMGA|Medtr5g026550.1	Ankyrin repeat domain-containing protein chr5 10672257-10674639 F EGN_Mt100125 20111014	GO:0009553|embryo sac development GO:0009567|double fertilization forming a zygote and endosperm GO:0080173|male-female gamete recognition during double fertilization	NA	GO:0005634|nucleus GO:0005739|mitochondrion
pt2_00104	A	A1S	Potri.001G129900	Potri.001G129900(AS)	POPTR_0001s01210	sp|O80450|TGT3B_ARATH	Trihelix transcription factor GT-3b OS=Arabidopsis thaliana GN=GT-3B PE=1 SV=1	AT2G38250.1	| Symbols: | Homeodomain-like superfamily protein | chr2:16018384-16019500 FORWARD LENGTH=289	LOC_Os04g51320.1	protein|transcription factor TF2, putative, expressed	IMGA|Medtr5g026540.1	Zinc finger and SCAN domain-containing protein chr5 10669389-10667294 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0010200|response to chitin	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus GO:0005730|nucleolus GO:0016592|mediator complex
pt2_00105	A	A1S	Potri.001G130100	Potri.001G130100(AS)	POPTR_0001s01220	NA	NA	AT3G45900.1	| Symbols: | Ribonuclease P protein subunit P38-related | chr3:16874566-16875984 REVERSE LENGTH=389	LOC_Os03g63660.1	protein|expressed protein	IMGA|Medtr5g026680.1	hypothetical protein chr5 10775154-10778700 E EGN_Mt100125 20111014	GO:0008150|biological_process GO:0015996|chlorophyll catabolic process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00106	A	A1S	Potri.001G130100	Potri.001G130100(AS)	POPTR_0001s01220	NA	NA	AT3G45900.1	| Symbols: | Ribonuclease P protein subunit P38-related | chr3:16874566-16875984 REVERSE LENGTH=389	LOC_Os03g63660.1	protein|expressed protein	IMGA|Medtr5g026680.1	hypothetical protein chr5 10775154-10778700 E EGN_Mt100125 20111014	GO:0008150|biological_process GO:0015996|chlorophyll catabolic process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00107	A	A1S	Potri.001G130100	Potri.001G130100(AS)	POPTR_0001s01220	NA	NA	AT3G45900.1	| Symbols: | Ribonuclease P protein subunit P38-related | chr3:16874566-16875984 REVERSE LENGTH=389	LOC_Os03g63660.1	protein|expressed protein	IMGA|Medtr5g026680.1	hypothetical protein chr5 10775154-10778700 E EGN_Mt100125 20111014	GO:0008150|biological_process GO:0015996|chlorophyll catabolic process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00108	A	A2S	Potri.001G130200	Potri.001G130200(AS) Potri.003G103700(BS)	POPTR_0001s01230	sp|O04066|ACBP_RICCO	Acyl-CoA-binding protein OS=Ricinus communis PE=3 SV=1	AT1G31812.1	| Symbols: ACBP6, ACBP | acyl-CoA-binding protein 6 | chr1:11411132-11412099 REVERSE LENGTH=92	LOC_Os08g06550.1	protein|acyl CoA binding protein, putative, expressed	IMGA|Medtr5g026740.1	Acyl-CoA-binding protein chr5 10795231-10792987 F EGN_Mt100125 20111014	GO:0006816|calcium ion transport GO:0006869|lipid transport GO:0007030|Golgi organization GO:0009409|response to cold GO:0009646|response to absence of light GO:0009651|response to salt stress GO:0010264|myo-inositol hexakisphosphate biosynthetic process GO:0019344|cysteine biosynthetic process GO:0050826|response to freezing	GO:0000062|fatty-acyl-CoA binding GO:0031210|phosphatidylcholine binding	GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane
pt2_00109	A	A5S	Potri.011G084800	Potri.011G084800(AS) Potri.001G130300(AS) Potri.013G043800(BS) Potri.004G071500(BS) Potri.016G093900(BS)	POPTR_0001s01240	NA	NA	NA	NA	NA	NA	NA	NA	GO:0000165|MAPK cascade GO:0006995|cellular response to nitrogen starvation GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process GO:0009814|defense response, incompatible interaction GO:0009816|defense response to bacterium, incompatible interaction GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0010310|regulation of hydrogen peroxide metabolic process GO:0031347|regulation of defense response GO:0031348|negative regulation of defense response GO:0042742|defense response to bacterium GO:0045088|regulation of innate immune response GO:0050832|defense response to fungus GO:0071482|cellular response to light stimulus	GO:0005515|protein binding	GO:0005634|nucleus GO:0009507|chloroplast
pt2_00110	A	A1S	Potri.001G130400	Potri.001G130400(AS)	POPTR_0001s01250	sp|Q9M2C8|PP291_ARATH	Pentatricopeptide repeat-containing protein At3g61360 OS=Arabidopsis thaliana GN=At3g61360 PE=2 SV=1	AT3G61360.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:22704630-22706126 REVERSE LENGTH=498	LOC_Os06g47950.1	protein|tetratricopeptide-like helical, putative, expressed	IMGA|Medtr1g108270.1	Pentatricopeptide repeat-containing protein chr1 31811104-31809581 H EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005739|mitochondrion
pt2_00111	B	B1S	Potri.001G130400	Potri.001G130400(BS)	POPTR_0001s01260	sp|Q9M2C8|PP291_ARATH	Pentatricopeptide repeat-containing protein At3g61360 OS=Arabidopsis thaliana GN=At3g61360 PE=2 SV=1	AT3G61360.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:22704630-22706126 REVERSE LENGTH=498	LOC_Os06g47950.1	protein|tetratricopeptide-like helical, putative, expressed	IMGA|Medtr1g108270.1	Pentatricopeptide repeat-containing protein chr1 31811104-31809581 H EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005739|mitochondrion
pt2_00112	A	A1S	Potri.001G130500	Potri.001G130500(AS)	POPTR_0001s01270	sp|Q12955|ANK3_HUMAN	Ankyrin-3 OS=Homo sapiens GN=ANK3 PE=1 SV=3	AT4G19150.1	| Symbols: | Ankyrin repeat family protein | chr4:10471578-10472677 REVERSE LENGTH=243	LOC_Os10g43040.1	protein|ankyrin repeat domain-containing protein 28, putative, expressed	IMGA|Medtr5g026800.1	Ankyrin repeat domain-containing protein chr5 10816790-10819302 F EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005737|cytoplasm
pt2_00113	A	A2S	Potri.001G130600	Potri.001G130600(AS) Potri.003G103300(DS)	POPTR_0001s01280	sp|Q94B60|CLPP4_ARATH	ATP-dependent Clp protease proteolytic subunit 4, chloroplastic OS=Arabidopsis thaliana GN=CLPP4 PE=1 SV=1	AT5G45390.1	| Symbols: CLPP4, NCLPP4 | CLP protease P4 | chr5:18396351-18397586 FORWARD LENGTH=292	LOC_Os10g43050.1	protein|OsClp11 - Putative Clp protease homologue, expressed	IMGA|Medtr5g026840.1	ATP-dependent Clp protease proteolytic subunit chr5 10835719-10840526 F EGN_Mt100125 20111014	GO:0006364|rRNA processing GO:0006508|proteolysis GO:0009658|chloroplast organization GO:0009902|chloroplast relocation GO:0010027|thylakoid membrane organization GO:0010207|photosystem II assembly GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0034660|ncRNA metabolic process GO:0035304|regulation of protein dephosphorylation GO:0042793|transcription from plastid promoter GO:0045893|positive regulation of transcription, DNA-dependent GO:0048510|regulation of timing of transition from vegetative to reproductive phase	GO:0004252|serine-type endopeptidase activity	GO:0009507|chloroplast GO:0009532|plastid stroma GO:0009535|chloroplast thylakoid membrane GO:0009570|chloroplast stroma GO:0009579|thylakoid GO:0009840|chloroplastic endopeptidase Clp complex GO:0009941|chloroplast envelope
pt2_00114	G	G1	NA	NA	POPTR_0001s01290	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00115	A	A1S	Potri.001G130700	Potri.001G130700(AS)	POPTR_0001s01300	sp|Q9FPT1|UBP12_ARATH	Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana GN=UBP12 PE=1 SV=2	AT3G17380.1	| Symbols: | TRAF-like family protein | chr3:5950240-5952124 FORWARD LENGTH=309	LOC_Os01g56490.1	protein|ubiquitin carboxyl-terminal hydrolase, putative, expressed	IMGA|Medtr5g086700.1	Ubiquitin carboxyl-terminal hydrolase chr5 36467904-36445584 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00116	B	B1S	Potri.001G130800	Potri.001G130800(BS)	POPTR_0001s01310	NA	NA	NA	NA	LOC_Os06g02520.1	protein|interacting protein of DMI3, putative, expressed	IMGA|Medtr5g026850.1	CYCLOPS chr5 10846747-10850578 F EGN_Mt100125 20111014	NA	NA	NA
pt2_00117	A	A1S	Potri.001G130900	Potri.001G130900(AS)	POPTR_0001s01320	NA	NA	AT4G19140.1	| Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:10469830-10471275 FORWARD LENGTH=303	LOC_Os04g51166.1	protein|expressed protein	IMGA|Medtr5g026860.1	hypothetical protein chr5 10858303-10851763 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_00118	C	C1S	Potri.001G131000	Potri.001G131000(CS)	sp|P41127|RL131_ARATH	60S ribosomal protein L13-1 OS=Arabidopsis thaliana GN=RPL13B PE=1 SV=1	AT3G49010.3	| Symbols: ATBBC1, BBC1, RSU2 | breast basic conserved 1 | chr3:18166971-18168047 REVERSE LENGTH=206	LOC_Os06g02510.2	protein|ribosomal protein L13, putative, expressed	IMGA|Medtr5g026750.1	60S ribosomal protein L13 chr5 10799760-10796813 E EGN_Mt100125 20111014	GO:0001510|RNA methylation GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005618|cell wall GO:0005622|intracellular GO:0005730|nucleolus GO:0005737|cytoplasm GO:0005774|vacuolar membrane GO:0005829|cytosol GO:0005840|ribosome GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane GO:0022625|cytosolic large ribosomal subunit GO:0022626|cytosolic ribosome
pt2_00119	A	A3S	Potri.001G131000	Potri.001G131000(AS) Potri.016G082300(DS) Potri.013G027600(DS)	POPTR_0001s01350	sp|P41127|RL131_ARATH	60S ribosomal protein L13-1 OS=Arabidopsis thaliana GN=RPL13B PE=1 SV=1	AT3G49010.3	| Symbols: ATBBC1, BBC1, RSU2 | breast basic conserved 1 | chr3:18166971-18168047 REVERSE LENGTH=206	LOC_Os06g02510.2	protein|ribosomal protein L13, putative, expressed	IMGA|Medtr5g026750.1	60S ribosomal protein L13 chr5 10799760-10796813 E EGN_Mt100125 20111014	GO:0001510|RNA methylation GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005618|cell wall GO:0005622|intracellular GO:0005730|nucleolus GO:0005737|cytoplasm GO:0005774|vacuolar membrane GO:0005829|cytosol GO:0005840|ribosome GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane GO:0022625|cytosolic large ribosomal subunit GO:0022626|cytosolic ribosome
pt2_00120	A	A2S	Potri.001G131100	Potri.001G131100(AS) Potri.003G102700(BS)	POPTR_0001s01360	sp|Q6NY74|RFA1_DANRE	Replication protein A 70 kDa DNA-binding subunit OS=Danio rerio GN=rpa1 PE=1 SV=1	AT2G06510.2	| Symbols: ATRPA1A, RPA1A, RPA70A, ATRPA70A | replication protein A 1A | chr2:2585215-2587601 FORWARD LENGTH=617	LOC_Os02g53680.1	protein|RPA1A - Putative single-stranded DNA binding complex subunit 1, expressed	IMGA|Medtr5g026890.1	Replication protein A 70 kDa DNA-binding subunit chr5 10868938-10877058 E EGN_Mt100125 20111014	GO:0006260|DNA replication GO:0006302|double-strand break repair GO:0010332|response to gamma radiation	GO:0003676|nucleic acid binding GO:0003677|DNA binding GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_00121	A	A1S	Potri.001G131300	Potri.001G131300(AS)	POPTR_0001s01370	NA	NA	AT5G45410.3	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G25030.2); Has 124 Blast hits to 124 proteins in 34 species: Archae - 2; Bacteria - 31; Metazoa - 0; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:18402071-18403282 REVERSE LENGTH=342	LOC_Os10g43060.1	protein|expressed protein	IMGA|Medtr5g026910.1	hypothetical protein chr5 10886125-10888055 H EGN_Mt100125 20111014	GO:0006612|protein targeting to membrane GO:0006944|cellular membrane fusion GO:0007165|signal transduction GO:0008150|biological_process GO:0009414|response to water deprivation GO:0009611|response to wounding GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009753|response to jasmonic acid stimulus GO:0009805|coumarin biosynthetic process GO:0010363|regulation of plant-type hypersensitive response GO:0030968|endoplasmic reticulum unfolded protein response GO:0035556|intracellular signal transduction GO:0042538|hyperosmotic salinity response GO:0043069|negative regulation of programmed cell death	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00122	A	A1S	Potri.001G131400	Potri.001G131400(AS)	POPTR_0001s01380	sp|Q9C6S7|PMTK_ARATH	Probable methyltransferase PMT20 OS=Arabidopsis thaliana GN=At1g31850 PE=1 SV=1	AT1G31850.2	| Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr1:11431165-11433443 FORWARD LENGTH=603	LOC_Os04g48230.2	protein|dehydration response related protein, putative, expressed	IMGA|Medtr5g026930.1	hypothetical protein chr5 10903456-10906651 F EGN_Mt100125 20111014	GO:0009269|response to desiccation GO:0009409|response to cold GO:0009651|response to salt stress GO:0009737|response to abscisic acid stimulus	GO:0008168|methyltransferase activity	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_00123	A	A1S	Potri.001G131400	Potri.001G131400(AS)	POPTR_0001s01380	sp|Q9C6S7|PMTK_ARATH	Probable methyltransferase PMT20 OS=Arabidopsis thaliana GN=At1g31850 PE=1 SV=1	AT1G31850.2	| Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr1:11431165-11433443 FORWARD LENGTH=603	LOC_Os04g48230.2	protein|dehydration response related protein, putative, expressed	IMGA|Medtr5g026930.1	hypothetical protein chr5 10903456-10906651 F EGN_Mt100125 20111014	GO:0009269|response to desiccation GO:0009409|response to cold GO:0009651|response to salt stress GO:0009737|response to abscisic acid stimulus	GO:0008168|methyltransferase activity	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_00124	A	A1S	Potri.001G131500	Potri.001G131500(AS)	POPTR_0001s01390	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00125	A	A1S	Potri.001G131500	Potri.001G131500(AS)	POPTR_0001s01390	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00126	A	A1S	Potri.001G131500	Potri.001G131500(AS)	POPTR_0001s01390	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00127	A	A1S	Potri.001G131600	Potri.001G131600(AS)	POPTR_0001s01400	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00128	A	A1S	Potri.001G131600	Potri.001G131600(AS)	POPTR_0001s01400	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00129	A	A1S	Potri.001G131800	Potri.001G131800(AS)	POPTR_0001s01410	sp|Q17TI5|BRX_ARATH	Protein BREVIS RADIX OS=Arabidopsis thaliana GN=BRX PE=1 SV=2	AT1G31880.1	| Symbols: NLM9, BRX | DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein | chr1:11447804-11450053 FORWARD LENGTH=344	LOC_Os08g36020.1	protein|Disease resistance/zinc finger/chromosome condensation-like region protein, putative, expressed	IMGA|Medtr5g026970.1	Protein BREVIS RADIX chr5 10930283-10925938 H EGN_Mt100125 20111014	GO:0009734|auxin mediated signaling pathway GO:0009736|cytokinin mediated signaling pathway GO:0009737|response to abscisic acid stimulus GO:0048364|root development GO:0048527|lateral root development	GO:0015250|water channel activity GO:0042802|identical protein binding	GO:0005634|nucleus
pt2_00130	A	A1S	Potri.001G132000	Potri.001G132000(AS)	POPTR_0001s01420	sp|O49668|PAM68_ARATH	Protein PAM68, chloroplastic OS=Arabidopsis thaliana GN=PAM68 PE=1 SV=1	AT4G19100.1	| Symbols: PAM68 | Protein of unknown function (DUF3464) | chr4:10453453-10454359 FORWARD LENGTH=214	LOC_Os06g21530.1	protein|expressed protein	IMGA|Medtr5g027010.1	hypothetical protein chr5 10943818-10942971 E EGN_Mt100125 20111014	GO:0008150|biological_process GO:0010207|photosystem II assembly GO:0015979|photosynthesis GO:0016556|mRNA modification	GO:0003674|molecular_function	GO:0005634|nucleus GO:0009507|chloroplast GO:0016020|membrane
pt2_00131	A	A1S	Potri.001G132100	Potri.001G132100(AS)	POPTR_0001s01430	NA	NA	AT3G01430.1	| Symbols: | BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT5G14890.1); Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:165595-166137 REVERSE LENGTH=180	LOC_Os02g50940.1	protein|NHL repeat-containing protein, putative, expressed	IMGA|AC233671_8.1	Potassium transporter AC233671.1 28492-41898 I EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00132	A	A2S	Potri.T172200	Potri.T172200(AS) Potri.001G132200(AS)	POPTR_0001s01440	NA	NA	NA	NA	LOC_Os08g08230.1	protein|kinesin-like protein, identical, putative, expressed	IMGA|Medtr5g026790.1	hypothetical protein chr5 10811564-10813909 F EGN_Mt100125 20111014	NA	NA	NA
pt2_00133	A	A1S	Potri.001G132300	Potri.001G132300(AS)	POPTR_0001s01450	sp|Q39255|SKP1A_ARATH	SKP1-like protein 1A OS=Arabidopsis thaliana GN=SKP1A PE=1 SV=1	AT1G75950.1	| Symbols: SKP1, ASK1, ATSKP1, SKP1A, UIP1 | S phase kinase-associated protein 1 | chr1:28516715-28517454 FORWARD LENGTH=160	LOC_Os09g36830.1	protein|Skp1 family, dimerisation domain containing protein, expressed	IMGA|Medtr5g022730.1	SKP1-like protein chr5 8734075-8735890 F EGN_Mt100125 20111014	GO:0000226|microtubule cytoskeleton organization GO:0006511|ubiquitin-dependent protein catabolic process GO:0007067|mitosis GO:0007140|male meiosis GO:0042023|DNA endoreduplication GO:0042752|regulation of circadian rhythm GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0043248|proteasome assembly GO:0045910|negative regulation of DNA recombination GO:0046686|response to cadmium ion GO:0051510|regulation of unidimensional cell growth GO:0051788|response to misfolded protein	GO:0004842|ubiquitin-protein ligase activity GO:0005515|protein binding	GO:0000151|ubiquitin ligase complex GO:0005634|nucleus GO:0005737|cytoplasm GO:0005819|spindle GO:0005829|cytosol GO:0005886|plasma membrane GO:0009524|phragmoplast GO:0019005|SCF ubiquitin ligase complex
pt2_00134	A	A1S	Potri.001G132400	Potri.001G132400(AS)	POPTR_0001s01460	sp|P42735|CDI8_ARATH	Cadmium-induced protein AS8 OS=Arabidopsis thaliana GN=At4g19070 PE=2 SV=1	AT4G19070.1	| Symbols: | Putative membrane lipoprotein | chr4:10446770-10448079 REVERSE LENGTH=171	LOC_Os07g05040.1	protein|cadmium-induced protein, putative, expressed	IMGA|contig_49646_2.1	Cadmium-induced protein AS8 contig_49646 3909-1914 F PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_00135	A	A1S	Potri.001G132500	Potri.001G132500(AS)	POPTR_0001s01470	sp|Q5ZIN1|NUDC_CHICK	Nuclear migration protein nudC OS=Gallus gallus GN=NUDC PE=2 SV=1	AT5G53400.1	| Symbols: BOB1 | HSP20-like chaperones superfamily protein | chr5:21661588-21663383 FORWARD LENGTH=304	LOC_Os06g12530.1	protein|CS domain containing protein, putative, expressed	IMGA|Medtr1g008170.1	Nuclear migration protein nudC chr1 1342714-1339933 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005737|cytoplasm
pt2_00136	A	A1S	Potri.001G132600	Potri.001G132600(AS)	POPTR_0001s01480	NA	NA	AT4G37740.1	| Symbols: AtGRF2, GRF2 | growth-regulating factor 2 | chr4:17725533-17727609 REVERSE LENGTH=535	LOC_Os02g47280.2	protein|growth-regulating factor, putative, expressed	IMGA|Medtr5g027030.1	hypothetical protein chr5 10949245-10952049 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009737|response to abscisic acid stimulus GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009965|leaf morphogenesis GO:0010162|seed dormancy process GO:0048366|leaf development	GO:0005524|ATP binding GO:0016818|hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	GO:0005634|nucleus
pt2_00137	A	A1S	Potri.001G132700	Potri.001G132700(AS)	POPTR_0001s01490	sp|Q8GYX0|MOB1_ARATH	MOB kinase activator-like 1 OS=Arabidopsis thaliana GN=At4g19045 PE=2 SV=1	AT4G19045.1	| Symbols: | Mob1/phocein family protein | chr4:10438213-10439788 REVERSE LENGTH=215	LOC_Os03g38020.1	protein|mps one binder kinase activator-like 1A, putative, expressed	IMGA|Medtr5g027160.1	Mps one binder kinase activator-like 1A chr5 11008648-11014415 F EGN_Mt100125 20111014	NA	NA	GO:0009507|chloroplast
pt2_00138	A	A1S	Potri.001G132700	Potri.001G132700(AS)	POPTR_0001s01490	sp|Q8GYX0|MOB1_ARATH	MOB kinase activator-like 1 OS=Arabidopsis thaliana GN=At4g19045 PE=2 SV=1	AT4G19045.1	| Symbols: | Mob1/phocein family protein | chr4:10438213-10439788 REVERSE LENGTH=215	LOC_Os03g38020.1	protein|mps one binder kinase activator-like 1A, putative, expressed	IMGA|Medtr5g027160.1	Mps one binder kinase activator-like 1A chr5 11008648-11014415 F EGN_Mt100125 20111014	NA	NA	GO:0009507|chloroplast
pt2_00139	A	A1S	Potri.001G132700	Potri.001G132700(AS)	POPTR_0001s01490	sp|Q8GYX0|MOB1_ARATH	MOB kinase activator-like 1 OS=Arabidopsis thaliana GN=At4g19045 PE=2 SV=1	AT4G19045.1	| Symbols: | Mob1/phocein family protein | chr4:10438213-10439788 REVERSE LENGTH=215	LOC_Os03g38020.1	protein|mps one binder kinase activator-like 1A, putative, expressed	IMGA|Medtr5g027160.1	Mps one binder kinase activator-like 1A chr5 11008648-11014415 F EGN_Mt100125 20111014	NA	NA	GO:0009507|chloroplast
pt2_00140	A	A1S	Potri.001G132800	Potri.001G132800(AS)	POPTR_0001s01500	NA	NA	AT1G32120.1	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Aminotransferase-like, plant mobile domain (InterPro:IPR019557), Protein of unknown function DUF716 (InterPro:IPR006904); BEST Arabidopsis thaliana protein match is: Aminotransferase-like, plant mobile domain family protein (TAIR:AT1G51538.1); Has 16736 Blast hits to 9656 proteins in 576 species: Archae - 4; Bacteria - 1182; Metazoa - 7098; Fungi - 2631; Plants - 1178; Viruses - 174; Other Eukaryotes - 4469 (source: NCBI BLink). | chr1:11552926-11558608 FORWARD LENGTH=1206	LOC_Os11g40570.2	protein|plant viral response family protein, putative, expressed	IMGA|Medtr5g027180.1	Transmembrane protein 45B chr5 11024450-11020755 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0016020|membrane
pt2_00141	A	A1S	Potri.001G132900	Potri.001G132900(AS)	POPTR_0001s01510	NA	NA	AT4G19040.1	| Symbols: EDR2 | ENHANCED DISEASE RESISTANCE 2 | chr4:10431799-10437171 REVERSE LENGTH=718	LOC_Os10g31770.1	protein|START domain containing protein, expressed	IMGA|Medtr5g027200.1	Kinase-START chr5 11031013-11044252 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0005543|phospholipid binding GO:0008289|lipid binding	GO:0005739|mitochondrion GO:0005886|plasma membrane
pt2_00142	A	A1S	Potri.001G133000	Potri.001G133000(AS)	POPTR_0001s01520	sp|Q7Y232|U73B4_ARATH	UDP-glycosyltransferase 73B4 OS=Arabidopsis thaliana GN=UGT73B4 PE=2 SV=1	AT2G15490.1	| Symbols: UGT73B4 | UDP-glycosyltransferase 73B4 | chr2:6761750-6763398 FORWARD LENGTH=484	LOC_Os01g08100.1	 protein|flavonol-3-O-glycoside-7-O-glucosyltransferase 1, putative, expressed	IMGA|Medtr5g027210.1	Cis-zeatin O-glucosyltransferase chr5 11046271-11044811 H EGN_Mt100125 20111014	GO:0008152|metabolic process GO:0051555|flavonol biosynthetic process GO:0051707|response to other organism	GO:0008194|UDP-glycosyltransferase activity GO:0016758|transferase activity, transferring hexosyl groups GO:0035251|UDP-glucosyltransferase activity GO:0047893|flavonol 3-O-glucosyltransferase activity GO:0080044|quercetin 7-O-glucosyltransferase activity	NA
pt2_00143	B	B1S	Potri.001G133100	Potri.001G133100(BS)	POPTR_0001s01530	sp|Q9SCP5|U73C7_ARATH	UDP-glycosyltransferase 73C7 OS=Arabidopsis thaliana GN=UGT73C7 PE=2 SV=1	AT3G53160.1	| Symbols: UGT73C7 | UDP-glucosyl transferase 73C7 | chr3:19702485-19703957 REVERSE LENGTH=490	LOC_Os05g08510.1	protein|glucosyltransferase, putative	IMGA|Medtr5g027210.1	Cis-zeatin O-glucosyltransferase chr5 11046271-11044811 H EGN_Mt100125 20111014	GO:0008152|metabolic process	GO:0008194|UDP-glycosyltransferase activity GO:0015020|glucuronosyltransferase activity GO:0016758|transferase activity, transferring hexosyl groups	GO:0005575|cellular_component
pt2_00144	A	A1S	Potri.001G133200	Potri.001G133200(AS)	POPTR_0001s01540	sp|P52581|IFRH_LUPAL	Isoflavone reductase homolog OS=Lupinus albus PE=2 SV=1	AT1G32100.1	| Symbols: ATPRR1, PRR1 | pinoresinol reductase 1 | chr1:11546472-11547953 REVERSE LENGTH=317	LOC_Os12g16220.2	protein|nmrA-like family domain containing protein, expressed	IMGA|Medtr5g027240.1	Isoflavone reductase-like protein chr5 11063979-11060644 F EGN_Mt100125 20111014	GO:0009807|lignan biosynthetic process GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process	GO:0000166|nucleotide binding GO:0010283|pinoresinol reductase activity	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_00145	A	A2S	Potri.001G133300	Potri.001G133300(AS) Potri.003G100200(DS)	POPTR_0001s01550	sp|P52581|IFRH_LUPAL	Isoflavone reductase homolog OS=Lupinus albus PE=2 SV=1	AT1G32100.1	| Symbols: ATPRR1, PRR1 | pinoresinol reductase 1 | chr1:11546472-11547953 REVERSE LENGTH=317	LOC_Os12g16410.1	protein|isoflavone reductase, putative, expressed	IMGA|Medtr5g027240.1	Isoflavone reductase-like protein chr5 11063979-11060644 F EGN_Mt100125 20111014	GO:0009807|lignan biosynthetic process GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process	GO:0000166|nucleotide binding GO:0010283|pinoresinol reductase activity	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_00146	A	A1S	Potri.001G133400	Potri.001G133400(AS)	POPTR_0001s01560	sp|Q9SAK5|APL_ARATH	Myb family transcription factor APL OS=Arabidopsis thaliana GN=APL PE=2 SV=2	AT5G45580.1	| Symbols: | Homeodomain-like superfamily protein | chr5:18481092-18482598 REVERSE LENGTH=264	LOC_Os02g47190.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr5g027440.1	Myb family transcription factor-related protein chr5 11161185-11157775 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00147	A	A1S	Potri.001G133500	Potri.001G133500(AS)	POPTR_0001s01580	sp|Q8IUF1|CBWD2_HUMAN	COBW domain-containing protein 2 OS=Homo sapiens GN=CBWD2 PE=1 SV=1	AT1G80480.1	| Symbols: PTAC17 | plastid transcriptionally active 17 | chr1:30258272-30260570 REVERSE LENGTH=444	LOC_Os04g51100.1	protein|COBW domain containing protein, putative, expressed	IMGA|Medtr5g044050.1	COBW domain-containing protein chr5 18952585-18958233 E EGN_Mt100125 20111014	NA	NA	GO:0009295|nucleoid GO:0009507|chloroplast GO:0009508|plastid chromosome GO:0009570|chloroplast stroma
pt2_00148	A	A1S	Potri.001G133500	Potri.001G133500(AS)	POPTR_0001s01580	sp|Q8IUF1|CBWD2_HUMAN	COBW domain-containing protein 2 OS=Homo sapiens GN=CBWD2 PE=1 SV=1	AT1G80480.1	| Symbols: PTAC17 | plastid transcriptionally active 17 | chr1:30258272-30260570 REVERSE LENGTH=444	LOC_Os04g51100.1	protein|COBW domain containing protein, putative, expressed	IMGA|Medtr5g044050.1	COBW domain-containing protein chr5 18952585-18958233 E EGN_Mt100125 20111014	NA	NA	GO:0009295|nucleoid GO:0009507|chloroplast GO:0009508|plastid chromosome GO:0009570|chloroplast stroma
pt2_00149	A	A1S	Potri.001G133500	Potri.001G133500(AS)	POPTR_0001s01580	sp|Q8IUF1|CBWD2_HUMAN	COBW domain-containing protein 2 OS=Homo sapiens GN=CBWD2 PE=1 SV=1	AT1G80480.1	| Symbols: PTAC17 | plastid transcriptionally active 17 | chr1:30258272-30260570 REVERSE LENGTH=444	LOC_Os04g51100.1	protein|COBW domain containing protein, putative, expressed	IMGA|Medtr5g044050.1	COBW domain-containing protein chr5 18952585-18958233 E EGN_Mt100125 20111014	NA	NA	GO:0009295|nucleoid GO:0009507|chloroplast GO:0009508|plastid chromosome GO:0009570|chloroplast stroma
pt2_00150	A	A1S	Potri.001G133600	Potri.001G133600(AS)	POPTR_0001s01590	NA	NA	AT5G45590.1	| Symbols: | Ribosomal protein L35 | chr5:18484643-18486227 REVERSE LENGTH=173	LOC_Os10g42860.1	protein|ribosomal protein L35, putative, expressed	IMGA|Medtr5g027470.1	50S ribosomal protein L35 chr5 11186617-11190600 F EGN_Mt100125 20111014	GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005739|mitochondrion GO:0005840|ribosome
pt2_00151	D	D1S	Potri.001G133600	Potri.001G133600(DS)	POPTR_0001s01590	NA	NA	AT5G45590.1	| Symbols: | Ribosomal protein L35 | chr5:18484643-18486227 REVERSE LENGTH=173	LOC_Os10g42860.1	protein|ribosomal protein L35, putative, expressed	IMGA|Medtr5g027470.1	50S ribosomal protein L35 chr5 11186617-11190600 F EGN_Mt100125 20111014	GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005739|mitochondrion GO:0005840|ribosome
pt2_00152	A	A1S	Potri.001G133600	Potri.001G133600(AS)	POPTR_0001s01590	NA	NA	AT5G45590.1	| Symbols: | Ribosomal protein L35 | chr5:18484643-18486227 REVERSE LENGTH=173	LOC_Os10g42860.1	protein|ribosomal protein L35, putative, expressed	IMGA|Medtr5g027470.1	50S ribosomal protein L35 chr5 11186617-11190600 F EGN_Mt100125 20111014	GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005739|mitochondrion GO:0005840|ribosome
pt2_00153	A	A1S	Potri.001G133700	Potri.001G133700(AS)	POPTR_0001s01600	NA	NA	NA	NA	LOC_Os06g02370.1	protein|expressed protein	IMGA|Medtr5g027460.1	hypothetical protein chr5 11177545-11181738 E EGN_Mt100125 20111014	NA	NA	NA
pt2_00154	A	A1S	Potri.001G133800	Potri.001G133800(AS)	POPTR_0001s01610	sp|Q03516|RSN1_YEAST	Uncharacterized protein RSN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RSN1 PE=1 SV=1	AT1G32090.1	| Symbols: | early-responsive to dehydration stress protein (ERD4) | chr1:11540244-11544041 REVERSE LENGTH=806	LOC_Os10g42820.1	protein|early-responsive to dehydration protein-related, putative, expressed	IMGA|Medtr5g027510.1	"Membrane protein, putative" chr5 11212999-11207479 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0009507|chloroplast GO:0016020|membrane
pt2_00155	A	A1S	Potri.001G133900	Potri.001G133900(AS)	POPTR_0001s01620	sp|O82286|BPC7_ARATH	Protein BASIC PENTACYSTEINE7 OS=Arabidopsis thaliana GN=BPC7 PE=1 SV=1	AT2G35550.4	| Symbols: BPC7, BBR, ATBPC7 | basic pentacysteine 7 | chr2:14929938-14930618 FORWARD LENGTH=226	LOC_Os10g02584.3	protein|GAGA-binding protein, putative, expressed	NA	NA	GO:0000398|mRNA splicing, via spliceosome GO:0006355|regulation of transcription, DNA-dependent GO:0009410|response to xenobiotic stimulus GO:0009688|abscisic acid biosynthetic process GO:0030422|production of siRNA involved in RNA interference GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0043687|post-translational protein modification GO:0045893|positive regulation of transcription, DNA-dependent GO:0048522|positive regulation of cellular process	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00156	A	A1S	Potri.001G134000	Potri.001G134000(AS)	POPTR_0001s01630	sp|P26302|KPPR_WHEAT	Phosphoribulokinase, chloroplastic OS=Triticum aestivum PE=2 SV=1	AT1G32060.1	| Symbols: PRK | phosphoribulokinase | chr1:11532668-11534406 FORWARD LENGTH=395	LOC_Os02g47020.1	protein|phosphoribulokinase/Uridine kinase family protein, expressed	IMGA|Medtr5g027530.1	Phosphoribulokinase chr5 11227544-11224060 F EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0002831|regulation of response to biotic stimulus GO:0005975|carbohydrate metabolic process GO:0006098|pentose-phosphate shunt GO:0006364|rRNA processing GO:0006612|protein targeting to membrane GO:0008152|metabolic process GO:0009058|biosynthetic process GO:0009409|response to cold GO:0009595|detection of biotic stimulus GO:0009637|response to blue light GO:0009657|plastid organization GO:0009697|salicylic acid biosynthetic process GO:0009773|photosynthetic electron transport in photosystem I GO:0009814|defense response, incompatible interaction GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009902|chloroplast relocation GO:0010103|stomatal complex morphogenesis GO:0010114|response to red light GO:0010200|response to chitin GO:0010207|photosystem II assembly GO:0010218|response to far red light GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0015979|photosynthesis GO:0018119|peptidyl-cysteine S-nitrosylation GO:0019344|cysteine biosynthetic process GO:0019684|photosynthesis, light reaction GO:0031348|negative regulation of defense response GO:0035304|regulation of protein dephosphorylation GO:0042742|defense response to bacterium GO:0043900|regulation of multi-organism process GO:0050832|defense response to fungus	GO:0005515|protein binding GO:0005524|ATP binding GO:0008974|phosphoribulokinase activity GO:0016301|kinase activity	GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009570|chloroplast stroma GO:0009579|thylakoid GO:0009941|chloroplast envelope GO:0010319|stromule GO:0016020|membrane GO:0048046|apoplast
pt2_00157	A	A1S	Potri.001G134100	Potri.001G134100(AS)	POPTR_0001s01640	sp|Q9C6X2|SCAM4_ARATH	Secretory carrier-associated membrane protein 4 OS=Arabidopsis thaliana GN=SCAMP4 PE=2 SV=1	AT1G32050.1	| Symbols: | SCAMP family protein | chr1:11528616-11530974 FORWARD LENGTH=264	LOC_Os04g50890.1	protein|secretory carrier-associated membrane protein, putative, expressed	IMGA|Medtr5g027790.1	Secretory carrier-associated membrane protein chr5 11353024-11346920 E EGN_Mt100125 20111014	GO:0006944|cellular membrane fusion GO:0015031|protein transport GO:0016192|vesicle-mediated transport	GO:0022857|transmembrane transporter activity	GO:0005739|mitochondrion GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0016021|integral to membrane
pt2_00158	A	A2S	Potri.001G134200	Potri.001G134200(AS) Potri.001G134600(DS)	POPTR_0001s01650	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00159	A	A4S	Potri.T129700	Potri.T129700(AS) Potri.001G134300(AS) Potri.T129600(BS) Potri.001G134700(BS)	POPTR_0001s01660	sp|Q39214|RPM1_ARATH	Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1 PE=1 SV=1	AT3G07040.1	| Symbols: RPM1, RPS3 | NB-ARC domain-containing disease resistance protein | chr3:2226244-2229024 REVERSE LENGTH=926	LOC_Os08g32880.1	protein|disease resistance protein RPM1, putative, expressed	IMGA|Medtr5g027900.1	Disease resistance protein RPP8 chr5 11392567-11395939 H EGN_Mt100125 20111014	GO:0006952|defense response GO:0009626|plant-type hypersensitive response	GO:0000166|nucleotide binding GO:0005515|protein binding GO:0043531|ADP binding	GO:0005886|plasma membrane
pt2_00160	G	G1	NA	NA	POPTR_0001s01670	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00161	C	C1S	Potri.001G134600	Potri.001G134600(CS)	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006974|response to DNA damage stimulus GO:0007050|cell cycle arrest	GO:0046983|protein dimerization activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00162	A	A4S	Potri.T129600	Potri.T129600(AS) Potri.T129700(AS) Potri.001G134700(AS) Potri.001G134300(AS)	POPTR_0001s01700	sp|Q39214|RPM1_ARATH	Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1 PE=1 SV=1	AT3G07040.1	| Symbols: RPM1, RPS3 | NB-ARC domain-containing disease resistance protein | chr3:2226244-2229024 REVERSE LENGTH=926	LOC_Os08g32880.1	protein|disease resistance protein RPM1, putative, expressed	IMGA|Medtr5g027900.1	Disease resistance protein RPP8 chr5 11392567-11395939 H EGN_Mt100125 20111014	GO:0006952|defense response GO:0009626|plant-type hypersensitive response	GO:0000166|nucleotide binding GO:0005515|protein binding GO:0043531|ADP binding	GO:0005886|plasma membrane
pt2_00163	A	A2S	Potri.001G134800	Potri.001G134800(AS) Potri.T129500(AS)	POPTR_0001s01720	NA	NA	AT5G45610.1	| Symbols: SUV2 | protein dimerizations | chr5:18496397-18499673 REVERSE LENGTH=646	LOC_Os02g03590.1	protein|expressed protein	IMGA|Medtr5g027920.1	hypothetical protein chr5 11415894-11407915 E EGN_Mt100125 20111014	GO:0006974|response to DNA damage stimulus GO:0007050|cell cycle arrest	GO:0046983|protein dimerization activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00164	A	A2S	Potri.001G134800	Potri.001G134800(AS) Potri.T129500(AS)	POPTR_0001s01720	NA	NA	AT5G45610.1	| Symbols: SUV2 | protein dimerizations | chr5:18496397-18499673 REVERSE LENGTH=646	LOC_Os02g03590.1	protein|expressed protein	IMGA|Medtr5g027920.1	hypothetical protein chr5 11415894-11407915 E EGN_Mt100125 20111014	GO:0006974|response to DNA damage stimulus GO:0007050|cell cycle arrest	GO:0046983|protein dimerization activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00165	A	A1S	Potri.001G134800	Potri.001G134800(AS)	POPTR_0001s01720	NA	NA	AT5G45610.1	| Symbols: SUV2 | protein dimerizations | chr5:18496397-18499673 REVERSE LENGTH=646	LOC_Os02g03590.1	protein|expressed protein	IMGA|Medtr5g027920.1	hypothetical protein chr5 11415894-11407915 E EGN_Mt100125 20111014	GO:0006974|response to DNA damage stimulus GO:0007050|cell cycle arrest	GO:0046983|protein dimerization activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00166	A	A1S	Potri.001G134900	Potri.001G134900(AS)	POPTR_0001s01730	sp|O81906|B120_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase B120 OS=Arabidopsis thaliana GN=B120 PE=1 SV=1	AT4G21390.1	| Symbols: B120 | S-locus lectin protein kinase family protein | chr4:11394458-11397474 REVERSE LENGTH=849	LOC_Os01g57480.1	protein|serine/threonine-protein kinase receptor precursor, putative, expressed	IMGA|contig_58312_1.1	Receptor-like protein kinase contig_58312 4100-921 H PREDN 20111014	GO:0002679|respiratory burst involved in defense response GO:0006468|protein phosphorylation GO:0006612|protein targeting to membrane GO:0006944|cellular membrane fusion GO:0006979|response to oxidative stress GO:0009611|response to wounding GO:0009863|salicylic acid mediated signaling pathway GO:0010200|response to chitin GO:0010363|regulation of plant-type hypersensitive response GO:0043069|negative regulation of programmed cell death GO:0048544|recognition of pollen GO:0050832|defense response to fungus	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_00167	A	A1S	Potri.001G135000	Potri.001G135000(AS)	POPTR_0001s01740	NA	NA	AT1G31940.1	| Symbols: | unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35585.1); Has 67 Blast hits to 67 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:11470293-11471154 REVERSE LENGTH=158	LOC_Os02g47000.1	protein|expressed protein	IMGA|Medtr5g027940.1	hypothetical protein chr5 11419250-11422033 F EGN_Mt100125 20111014	NA	NA	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_00168	A	A1S	Potri.001G135100	Potri.001G135100(AS)	POPTR_0001s01750	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00169	A	A1S	Potri.001G135200	Potri.001G135200(AS)	POPTR_0001s01760	sp|Q54NQ0|PSD13_DICDI	26S proteasome non-ATPase regulatory subunit 13 OS=Dictyostelium discoideum GN=psmD13 PE=2 SV=1	AT5G45620.1	| Symbols: | Proteasome component (PCI) domain protein | chr5:18501590-18503868 FORWARD LENGTH=386	LOC_Os01g32800.2	protein|proteasome subunit, putative, expressed	IMGA|Medtr5g027960.1	26S proteasome non-ATPase regulatory subunit chr5 11427346-11432484 F EGN_Mt100125 20111014	GO:0006094|gluconeogenesis GO:0006096|glycolysis GO:0006511|ubiquitin-dependent protein catabolic process GO:0007010|cytoskeleton organization GO:0009651|response to salt stress GO:0009853|photorespiration GO:0010498|proteasomal protein catabolic process GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0043248|proteasome assembly GO:0046686|response to cadmium ion GO:0051604|protein maturation GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	GO:0003674|molecular_function	GO:0000502|proteasome complex GO:0005737|cytoplasm GO:0005829|cytosol GO:0008541|proteasome regulatory particle, lid subcomplex
pt2_00170	A	A1S	Potri.001G135300	Potri.001G135300(AS)	POPTR_0001s01770	sp|P93163|GPA2_SOYBN	Guanine nucleotide-binding protein alpha-2 subunit OS=Glycine max GN=GPA2 PE=2 SV=1	AT1G31930.3	| Symbols: XLG3 | extra-large GTP-binding protein 3 | chr1:11465832-11468961 FORWARD LENGTH=848	LOC_Os11g10050.1	protein|G-protein alpha subunit, putative, expressed	IMGA|Medtr5g027970.1	Guanine nucleotide-binding protein alpha-2 subunit chr5 11441668-11436072 E EGN_Mt100125 20111014	GO:0006184|GTP catabolic process GO:0007165|signal transduction GO:0007186|G-protein coupled receptor signaling pathway GO:0007188|adenylate cyclase-modulating G-protein coupled receptor signaling pathway GO:0009630|gravitropism GO:0009652|thigmotropism GO:0009723|response to ethylene stimulus GO:0009737|response to abscisic acid stimulus GO:0009744|response to sucrose stimulus GO:0009749|response to glucose stimulus GO:0009750|response to fructose stimulus GO:0010555|response to mannitol stimulus GO:0048364|root development GO:2000067|regulation of root morphogenesis	GO:0001664|G-protein coupled receptor binding GO:0003924|GTPase activity GO:0004871|signal transducer activity GO:0019001|guanyl nucleotide binding GO:0031683|G-protein beta/gamma-subunit complex binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005834|heterotrimeric G-protein complex GO:0031234|extrinsic to internal side of plasma membrane
pt2_00171	A	A1S	Potri.001G135400	Potri.001G135400(AS)	POPTR_0001s01780	sp|Q9C6T2|PPR68_ARATH	Pentatricopeptide repeat-containing protein At1g31920 OS=Arabidopsis thaliana GN=PCMP-H11 PE=2 SV=1	AT1G31920.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:11461864-11463684 REVERSE LENGTH=606	LOC_Os02g46980.1	protein|pentatricopeptide, putative, expressed	IMGA|Medtr5g027980.1	Pentatricopeptide repeat-containing protein chr5 11448477-11450534 E EGN_Mt100125 20111014	GO:0008150|biological_process GO:0010075|regulation of meristem growth GO:0016556|mRNA modification	NA	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_00172	A	A1S	Potri.001G135500	Potri.001G135500(AS)	POPTR_0001s01790	sp|P24521|ERG8_YEAST	Phosphomevalonate kinase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERG8 PE=1 SV=2	AT1G31910.1	| Symbols: | GHMP kinase family protein | chr1:11459050-11461649 FORWARD LENGTH=505	LOC_Os03g48160.1	protein|phosphomevalonate kinase, putative, expressed	NA	NA	GO:0016126|sterol biosynthetic process GO:0019745|pentacyclic triterpenoid biosynthetic process	GO:0005524|ATP binding	GO:0005737|cytoplasm
pt2_00173	A	A1S	Potri.001G135600	Potri.001G135600(AS)	POPTR_0001s01800	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00174	A	A1S	Potri.001G135700	Potri.001G135700(AS)	POPTR_0001s01810	sp|Q8VZC9|VPS25_ARATH	Vacuolar protein sorting-associated protein 25 OS=Arabidopsis thaliana GN=VPS25 PE=1 SV=1	AT4G19003.1	| Symbols: VPS25 | E2F/DP family winged-helix DNA-binding domain | chr4:10407571-10408582 REVERSE LENGTH=179	LOC_Os01g46932.1	protein|vacuolar protein-sorting-associated protein 25, putative, expressed	IMGA|Medtr5g028000.1	Vacuolar protein sorting-associated protein chr5 11452163-11456084 F EGN_Mt100125 20111014	GO:0016192|vesicle-mediated transport	GO:0005515|protein binding	GO:0000814|ESCRT II complex GO:0005737|cytoplasm
pt2_00175	A	A2S	Potri.001G135800	Potri.001G135800(AS) Potri.003G098000(DS)	POPTR_0001s01820	sp|Q9C9G6|U195A_ARATH	MIP18 family protein At1g68310 OS=Arabidopsis thaliana GN=At1g68310 PE=2 SV=2	AT1G68310.2	| Symbols: AE7 | Protein of unknown function (DUF59) | chr1:25599812-25601239 FORWARD LENGTH=157	LOC_Os04g50864.1	protein|expressed protein	IMGA|Medtr5g028010.1	Protein FAM96B chr5 11460243-11457272 E EGN_Mt100125 20111014	GO:0009944|polarity specification of adaxial/abaxial axis GO:0042127|regulation of cell proliferation GO:0051726|regulation of cell cycle	GO:0010209|vacuolar sorting signal binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00176	A	A2S	Potri.001G135900	Potri.001G135900(AS) Potri.014G062000(AS)	POPTR_0001s01830	sp|Q96ST2|IWS1_HUMAN	Protein IWS1 homolog OS=Homo sapiens GN=IWS1 PE=1 SV=2	AT1G32130.1	| Symbols: IWS1, ATIWS1 | Transcription elongation factor (TFIIS) family protein | chr1:11559146-11561786 REVERSE LENGTH=502	LOC_Os01g05420.1	protein|IWS1 C-terminus family protein, putative, expressed	IMGA|Medtr5g028030.1	IWS1-like protein chr5 11466638-11471506 F EGN_Mt100125 20111014	GO:0006351|transcription, DNA-dependent GO:0006487|protein N-linked glycosylation GO:0006623|protein targeting to vacuole GO:0006944|cellular membrane fusion GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process GO:0009742|brassinosteroid mediated signaling pathway GO:0016192|vesicle-mediated transport GO:0032784|regulation of DNA-dependent transcription, elongation GO:0048193|Golgi vesicle transport	GO:0003674|molecular_function GO:0003677|DNA binding	GO:0005634|nucleus
pt2_00177	A	A2S	Potri.014G062400	Potri.014G062400(AS) Potri.001G136000(BS)	POPTR_0001s01840	sp|P23922|HBP1A_WHEAT	Transcription factor HBP-1a OS=Triticum aestivum PE=2 SV=1	AT2G35530.1	| Symbols: bZIP16, AtbZIP16 | basic region/leucine zipper transcription factor 16 | chr2:14923280-14926025 REVERSE LENGTH=409	LOC_Os12g13170.2	protein|transcription factor, putative, expressed	IMGA|Medtr5g028850.1	G-box-binding factor chr5 11821253-11827602 E EGN_Mt100125 20111014	GO:0006351|transcription, DNA-dependent GO:0006355|regulation of transcription, DNA-dependent GO:0006473|protein acetylation GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_00178	C	C2A	Potri.001G136000	Potri.001G136000(CA) Potri.014G062400(CA)	sp|P23922|HBP1A_WHEAT	Transcription factor HBP-1a OS=Triticum aestivum PE=2 SV=1	AT2G35530.1	| Symbols: bZIP16, AtbZIP16 | basic region/leucine zipper transcription factor 16 | chr2:14923280-14926025 REVERSE LENGTH=409	LOC_Os12g13170.2	protein|transcription factor, putative, expressed	IMGA|Medtr5g028850.1	G-box-binding factor chr5 11821253-11827602 E EGN_Mt100125 20111014	GO:0006351|transcription, DNA-dependent GO:0006355|regulation of transcription, DNA-dependent GO:0006473|protein acetylation GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_00179	A	A1S	Potri.014G062500	Potri.014G062500(AS)	POPTR_0001s01860	NA	NA	AT1G32160.1	| Symbols: | Protein of unknown function (DUF760) | chr1:11568701-11570241 FORWARD LENGTH=406	LOC_Os04g50860.1	protein|expressed protein	IMGA|Medtr5g028020.1	hypothetical protein chr5 11461564-11465157 F EGN_Mt100125 20111014	GO:0008150|biological_process GO:0009965|leaf morphogenesis GO:0010155|regulation of proton transport GO:0030154|cell differentiation GO:0046777|protein autophosphorylation	GO:0003674|molecular_function	GO:0005634|nucleus GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_00180	A	A1S	Potri.001G136100	Potri.001G136100(AS)	POPTR_0001s01870	sp|Q38908|XTH30_ARATH	Probable xyloglucan endotransglucosylase/hydrolase protein 30 OS=Arabidopsis thaliana GN=XTH30 PE=2 SV=2	AT1G32170.1	| Symbols: XTR4, XTH30 | xyloglucan endotransglucosylase/hydrolase 30 | chr1:11575434-11577776 FORWARD LENGTH=343	LOC_Os02g03550.1	protein|glycosyl hydrolases family 16, putative, expressed	IMGA|Medtr5g029100.1	Xyloglucan endotransglucosylase/hydrolase chr5 11910441-11914089 F EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0006073|cellular glucan metabolic process	GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0016762|xyloglucan:xyloglucosyl transferase activity GO:0016798|hydrolase activity, acting on glycosyl bonds	GO:0005618|cell wall GO:0048046|apoplast
pt2_00181	A	A1S	Potri.001G136200	Potri.001G136200(AS)	POPTR_0001s01880	sp|Q9M9M4|CSLD3_ARATH	Cellulose synthase-like protein D3 OS=Arabidopsis thaliana GN=CSLD3 PE=1 SV=1	AT3G03050.1	| Symbols: CSLD3, KJK, ATCSLD3 | cellulose synthase-like D3 | chr3:687873-691629 FORWARD LENGTH=1145	LOC_Os06g02180.1	protein|CSLD2 - cellulose synthase-like family D, expressed	IMGA|Medtr5g029190.1	Cellulose synthase-like protein chr5 11949044-11944517 E EGN_Mt100125 20111014	GO:0000271|polysaccharide biosynthetic process GO:0009409|response to cold GO:0010583|response to cyclopentenone GO:0030244|cellulose biosynthetic process	GO:0016757|transferase activity, transferring glycosyl groups GO:0016759|cellulose synthase activity GO:0016760|cellulose synthase (UDP-forming) activity GO:0051753|mannan synthase activity	GO:0005768|endosome GO:0005783|endoplasmic reticulum GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0005886|plasma membrane GO:0016020|membrane
pt2_00182	A	A1S	Potri.001G136300	Potri.001G136300(AS)	POPTR_0001s01890	sp|P37707|B2_DAUCA	B2 protein OS=Daucus carota PE=2 SV=1	AT5G61910.3	| Symbols: | DCD (Development and Cell Death) domain protein | chr5:24861091-24863741 REVERSE LENGTH=742	LOC_Os02g51140.1	protein|N-rich protein, putative, expressed	IMGA|Medtr1g018690.1	hypothetical protein chr1 5599102-5595506 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_00183	A	A1S	Potri.001G136400	Potri.001G136400(AS)	POPTR_0001s01920	sp|Q2HJ19|F108A_BOVIN	Abhydrolase domain-containing protein FAM108A OS=Bos taurus GN=FAM108A PE=2 SV=1	AT1G32190.1	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr1:11593059-11595731 REVERSE LENGTH=422	LOC_Os08g06420.2	protein|abhydrolase domain-containing protein FAM108C1, putative, expressed	IMGA|Medtr5g029210.1	Abhydrolase domain-containing protein FAM108C1 chr5 11963126-11958092 E EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0009855|determination of bilateral symmetry GO:0009944|polarity specification of adaxial/abaxial axis GO:0010014|meristem initiation GO:0010075|regulation of meristem growth	GO:0016787|hydrolase activity	GO:0005576|extracellular region GO:0005886|plasma membrane
pt2_00184	A	A1S	Potri.001G136600	Potri.001G136600(AS)	POPTR_0001s01930	sp|Q39639|PLSB_CUCSA	Glycerol-3-phosphate acyltransferase, chloroplastic OS=Cucumis sativus PE=2 SV=1	AT1G32200.2	| Symbols: ATS1, ACT1 | phospholipid/glycerol acyltransferase family protein | chr1:11602223-11605001 REVERSE LENGTH=459	LOC_Os10g42720.1	protein|acyltransferase, putative, expressed	IMGA|Medtr5g029230.1	Glycerol-3-phosphate acyltransferase chr5 11985051-11977783 F EGN_Mt100125 20111014	GO:0006636|unsaturated fatty acid biosynthetic process GO:0006655|phosphatidylglycerol biosynthetic process GO:0008152|metabolic process GO:0015995|chlorophyll biosynthetic process GO:0016117|carotenoid biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway	GO:0004366|glycerol-3-phosphate O-acyltransferase activity GO:0016746|transferase activity, transferring acyl groups	GO:0009507|chloroplast GO:0009536|plastid GO:0009570|chloroplast stroma
pt2_00185	A	A1S	Potri.001G136700	Potri.001G136700(AS)	POPTR_0001s01940	NA	NA	AT3G12890.1	| Symbols: ASML2 | activator of spomin::LUC2 | chr3:4099223-4100277 FORWARD LENGTH=251	LOC_Os03g04620.1	protein|CCT motif family protein, expressed	IMGA|Medtr5g010120.1	Zinc finger protein CONSTANS-like protein chr5 2398574-2400307 H EGN_Mt100125 20111014	GO:0010182|sugar mediated signaling pathway GO:0045893|positive regulation of transcription, DNA-dependent	NA	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_00186	A	A1S	Potri.001G136800	Potri.001G136800(AS)	POPTR_0001s01950	sp|Q9ZWQ7|DAD1_CITUN	Defender against cell death 1 OS=Citrus unshiu GN=DAD1 PE=3 SV=1	AT2G35520.1	| Symbols: DAD2 | Defender against death (DAD family) protein | chr2:14921587-14922657 FORWARD LENGTH=115	LOC_Os04g32550.1	protein|defender against cell death 1, putative, expressed	IMGA|Medtr5g029240.1	Defender against cell death chr5 11989257-11987085 F EGN_Mt100125 20111014	NA	GO:0003674|molecular_function	GO:0016021|integral to membrane
pt2_00187	A	A1S	Potri.001G136900	Potri.001G136900(AS)	POPTR_0001s01960	sp|Q9FVR6|Y1222_ARATH	Uncharacterized protein At1g32220, chloroplastic OS=Arabidopsis thaliana GN=At1g32220 PE=1 SV=1	AT1G32220.1	| Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr1:11608038-11609591 FORWARD LENGTH=296	LOC_Os04g33060.1	protein|NAD dependent epimerase/dehydratase family protein, putative, expressed	IMGA|Medtr5g029260.1	hypothetical protein chr5 11991767-11996132 E EGN_Mt100125 20111014	GO:0006979|response to oxidative stress GO:0042631|cellular response to water deprivation GO:0044237|cellular metabolic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0050662|coenzyme binding	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009579|thylakoid GO:0010287|plastoglobule
pt2_00188	A	A1S	Potri.001G137000	Potri.001G137000(AS)	POPTR_0001s01970	NA	NA	NA	NA	LOC_Os02g46956.2	protein|expressed protein	IMGA|Medtr5g029310.1	hypothetical protein chr5 12015456-12011283 F EGN_Mt100125 20111014	NA	NA	NA
pt2_00189	C	C1S	Potri.001G137200	Potri.001G137200(CS)	sp|Q8RY59|RCD1_ARATH	Inactive poly [ADP-ribose] polymerase RCD1 OS=Arabidopsis thaliana GN=RCD1 PE=1 SV=1	AT1G32230.3	| Symbols: AtRCD1 | WWE protein-protein interaction domain protein family | chr1:11613427-11615748 FORWARD LENGTH=570	LOC_Os10g42710.1	protein|RCD1, putative, expressed	IMGA|Medtr5g032190.1	hypothetical protein chr5 13403190-13409591 E EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0000303|response to superoxide GO:0006096|glycolysis GO:0006486|protein glycosylation GO:0006612|protein targeting to membrane GO:0006623|protein targeting to vacuole GO:0006809|nitric oxide biosynthetic process GO:0006833|water transport GO:0006944|cellular membrane fusion GO:0006970|response to osmotic stress GO:0006972|hyperosmotic response GO:0006979|response to oxidative stress GO:0007030|Golgi organization GO:0008219|cell death GO:0009266|response to temperature stimulus GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009605|response to external stimulus GO:0009651|response to salt stress GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009743|response to carbohydrate stimulus GO:0009751|response to salicylic acid stimulus GO:0009790|embryo development GO:0009816|defense response to bacterium, incompatible interaction GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009873|ethylene mediated signaling pathway GO:0010102|lateral root morphogenesis GO:0010193|response to ozone GO:0010363|regulation of plant-type hypersensitive response GO:0012501|programmed cell death GO:0016192|vesicle-mediated transport GO:0030968|endoplasmic reticulum unfolded protein response GO:0031348|negative regulation of defense response GO:0043069|negative regulation of programmed cell death GO:0046686|response to cadmium ion GO:0048193|Golgi vesicle transport GO:0050832|defense response to fungus GO:2000377|regulation of reactive oxygen species metabolic process	GO:0003950|NAD+ ADP-ribosyltransferase activity GO:0005515|protein binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_00190	A	A1S	Potri.001G137300	Potri.001G137300(AS)	POPTR_0001s01990	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00191	A	A1S	Potri.001G137500	Potri.001G137500(AS)	POPTR_0001s02000	sp|B8G6R5|RL14_CHLAD	50S ribosomal protein L14 OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=rplN PE=3 SV=1	AT5G46160.2	| Symbols: | Ribosomal protein L14p/L23e family protein | chr5:18711456-18712341 REVERSE LENGTH=172	LOC_Os12g42180.1	protein|ribosomal protein, putative, expressed	IMGA|Medtr5g096490.1	50S ribosomal protein L14 chr5 41154166-41149355 F EGN_Mt100125 20111014	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0006354|DNA-dependent transcription, elongation GO:0006412|translation GO:0009086|methionine biosynthetic process	GO:0003735|structural constituent of ribosome	GO:0005840|ribosome GO:0009507|chloroplast GO:0015934|large ribosomal subunit
pt2_00192	A	A1S	Potri.001G137600	Potri.001G137600(AS)	POPTR_0001s02010	sp|Q9C616|KAN2_ARATH	Probable transcription factor KAN2 OS=Arabidopsis thaliana GN=KAN2 PE=2 SV=1	AT1G32240.1	| Symbols: KAN2 | Homeodomain-like superfamily protein | chr1:11625882-11630355 REVERSE LENGTH=388	LOC_Os02g46940.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr5g029470.1	Two-component response regulator EHD1 chr5 12096263-12101771 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009737|response to abscisic acid stimulus GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009944|polarity specification of adaxial/abaxial axis GO:0010162|seed dormancy process GO:0048440|carpel development GO:0048481|ovule development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00193	A	A1S	Potri.001G137700	Potri.001G137700(AS)	POPTR_0001s02020	sp|Q9STM3|REF6_ARATH	Lysine-specific demethylase REF6 OS=Arabidopsis thaliana GN=REF6 PE=1 SV=1	AT5G46910.1	| Symbols: | Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein | chr5:19046888-19050880 FORWARD LENGTH=787	LOC_Os10g42690.1	protein|jmjC domain containing protein, expressed	IMGA|Medtr5g029370.1	Lysine-specific demethylase 5B chr5 12053845-12060460 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0010200|response to chitin	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00194	A	A1S	Potri.001G137800	Potri.001G137800(AS)	POPTR_0001s02030	sp|Q9FJS2|HDG5_ARATH	Homeobox-leucine zipper protein HDG5 OS=Arabidopsis thaliana GN=HDG5 PE=2 SV=3	AT5G46880.1	| Symbols: HB-7, HDG5 | homeobox-7 | chr5:19031540-19035388 FORWARD LENGTH=826	LOC_Os10g42490.1	protein|homeobox and START domains containing protein, putative, expressed	IMGA|Medtr5g029320.1	Homeobox-leucine zipper protein ROC3 chr5 12022721-12028684 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006944|cellular membrane fusion	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_00195	A	A1S	Potri.001G137900	Potri.001G137900(AS)	POPTR_0001s02040	sp|Q94KU5|PAP3_BRACM	Plastid lipid-associated protein 3, chloroplastic OS=Brassica campestris GN=PAP3 PE=2 SV=1	AT2G35490.1	| Symbols: | Plastid-lipid associated protein PAP / fibrillin family protein | chr2:14912309-14913797 REVERSE LENGTH=376	LOC_Os10g42500.1	protein|PAP fibrillin family domain containing protein, expressed	IMGA|Medtr5g029590.1	Plastoglobulin-1 chr5 12177092-12181470 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0005198|structural molecule activity	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009536|plastid GO:0009579|thylakoid GO:0010287|plastoglobule
pt2_00196	B	B2S	Potri.001G138000	Potri.001G138000(BS) Potri.003G095700(DS)	POPTR_0001s02050	sp|Q9AWK2|CML11_ORYSJ	Probable calcium-binding protein CML11 OS=Oryza sativa subsp. japonica GN=CML11 PE=2 SV=1	AT3G03000.1	| Symbols: | EF hand calcium-binding protein family | chr3:677388-677885 FORWARD LENGTH=165	LOC_Os01g32120.1	protein|OsCML11 - Calmodulin-related calcium sensor protein, expressed	IMGA|Medtr5g088320.1	Calmodulin chr5 37281091-37277966 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0005509|calcium ion binding	GO:0005575|cellular_component
pt2_00197	A	A1S	Potri.001G138100	Potri.001G138100(AS)	POPTR_0001s02060	sp|Q2KIN1|DPM2_BOVIN	Dolichol phosphate-mannose biosynthesis regulatory protein OS=Bos taurus GN=DPM2 PE=3 SV=3	AT1G74340.1	| Symbols: | dolichol phosphate-mannose biosynthesis regulatory protein-related | chr1:27948288-27948654 REVERSE LENGTH=80	LOC_Os02g04725.2	protein|dolichol phosphate-mannose biosynthesis regulatory protein, putative, expressed	NA	NA	GO:0009059|macromolecule biosynthetic process	GO:0004582|dolichyl-phosphate beta-D-mannosyltransferase activity	GO:0005783|endoplasmic reticulum GO:0009507|chloroplast GO:0033185|dolichol-phosphate-mannose synthase complex
pt2_00198	A	A1S	Potri.001G138200	Potri.001G138200(AS)	POPTR_0001s02070	NA	NA	AT1G32260.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35480.1); Has 48 Blast hits to 48 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:11640760-11641784 REVERSE LENGTH=202	LOC_Os02g03560.1	protein|expressed protein	IMGA|Medtr5g029600.1	hypothetical protein chr5 12186921-12184071 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_00199	A	A1S	Potri.001G138300	Potri.001G138300(AS)	POPTR_0001s02080	NA	NA	AT2G35470.1	| Symbols: | unknown protein; Has 25 Blast hits to 25 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:14909014-14909720 REVERSE LENGTH=167	NA	NA	IMGA|Medtr5g029620.1	hypothetical protein chr5 12190623-12191666 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_00200	A	A2S	Potri.001G138300	Potri.001G138300(AS) Potri.003G095500(DS)	POPTR_0001s02080	NA	NA	AT2G35470.1	| Symbols: | unknown protein; Has 25 Blast hits to 25 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:14909014-14909720 REVERSE LENGTH=167	NA	NA	IMGA|Medtr5g029620.1	hypothetical protein chr5 12190623-12191666 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_00201	A	A1S	Potri.001G138300	Potri.001G138300(AS)	POPTR_0001s02080	NA	NA	AT2G35470.1	| Symbols: | unknown protein; Has 25 Blast hits to 25 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:14909014-14909720 REVERSE LENGTH=167	NA	NA	IMGA|Medtr5g029620.1	hypothetical protein chr5 12190623-12191666 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_00202	A	A1S	Potri.001G138400	Potri.001G138400(AS)	POPTR_0001s02090	NA	NA	AT4G17720.1	| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr4:9862660-9864498 REVERSE LENGTH=313	LOC_Os04g50790.1	protein|RNA recognition motif, putative, expressed	IMGA|Medtr5g029640.1	Protein vip1 chr5 12209131-12201991 E EGN_Mt100125 20111014	GO:0009627|systemic acquired resistance GO:0034976|response to endoplasmic reticulum stress	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding	GO:0005634|nucleus GO:0005829|cytosol
pt2_00203	A	A2S	Potri.001G138500	Potri.001G138500(AS) Potri.003G095300(DS)	POPTR_0001s02100	sp|P93654|SYP22_ARATH	Syntaxin-22 OS=Arabidopsis thaliana GN=SYP22 PE=1 SV=1	AT5G46860.1	| Symbols: VAM3, ATVAM3, SYP22, ATSYP22, SGR3 | Syntaxin/t-SNARE family protein | chr5:19012342-19013795 REVERSE LENGTH=268	LOC_Os01g15110.1	protein|syntaxin, putative, expressed	IMGA|Medtr5g029650.1	Syntaxin chr5 12211653-12214686 F EGN_Mt100125 20111014	GO:0000902|cell morphogenesis GO:0006623|protein targeting to vacuole GO:0006886|intracellular protein transport GO:0006944|cellular membrane fusion GO:0007030|Golgi organization GO:0007033|vacuole organization GO:0009556|microsporogenesis GO:0009660|amyloplast organization GO:0009959|negative gravitropism GO:0016049|cell growth GO:0016192|vesicle-mediated transport GO:0016197|endosomal transport GO:0048193|Golgi vesicle transport GO:0052543|callose deposition in cell wall	GO:0005484|SNAP receptor activity GO:0005515|protein binding	GO:0000325|plant-type vacuole GO:0005770|late endosome GO:0005773|vacuole GO:0005794|Golgi apparatus GO:0009705|plant-type vacuole membrane GO:0030140|trans-Golgi network transport vesicle
pt2_00204	A	A1S	Potri.001G138600	Potri.001G138600(AS)	POPTR_0001s02110	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006506|GPI anchor biosynthetic process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005789|endoplasmic reticulum membrane
pt2_00205	A	A1S	Potri.001G138700	Potri.001G138700(AS)	POPTR_0001s02120	NA	NA	AT1G32310.1	| Symbols: | unknown protein; Has 28 Blast hits to 28 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:11653619-11654538 FORWARD LENGTH=100	NA	NA	IMGA|Medtr5g029660.1	hypothetical protein chr5 12219482-12222589 F EGN_Mt100125 20111014	GO:0007276|gamete generation GO:0009555|pollen development GO:0009556|microsporogenesis GO:0032875|regulation of DNA endoreduplication GO:0045732|positive regulation of protein catabolic process GO:0046621|negative regulation of organ growth GO:0051302|regulation of cell division GO:0051510|regulation of unidimensional cell growth	GO:0005515|protein binding GO:0010997|anaphase-promoting complex binding	NA
pt2_00206	A	A1S	Potri.001G138800	Potri.001G138800(AS)	POPTR_0001s02130	sp|Q8RXG3|M2K5_ARATH	Mitogen-activated protein kinase kinase 5 OS=Arabidopsis thaliana GN=MKK5 PE=1 SV=2	AT1G32320.1	| Symbols: ATMKK10, MKK10 | MAP kinase kinase 10 | chr1:11655156-11656073 FORWARD LENGTH=305	LOC_Os03g12390.1	protein|STE_MEK_ste7_MAP2K.6 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	IMGA|Medtr5g029670.1	Mitogen-activated protein kinase chr5 12225943-12223724 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004708|MAP kinase kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	NA
pt2_00207	A	A1S	Potri.001G138900	Potri.001G138900(AS)	POPTR_0001s02140	sp|Q40152|HSF8_SOLLC	Heat shock factor protein HSF8 OS=Solanum lycopersicum GN=HSF8 PE=3 SV=1	AT1G32330.1	| Symbols: ATHSFA1D, HSFA1D | heat shock transcription factor A1D | chr1:11657265-11660234 REVERSE LENGTH=485	LOC_Os03g63750.1	protein|HSF-type DNA-binding domain containing protein, expressed	IMGA|Medtr5g029680.1	Heat stress transcription factor A-1d chr5 12231861-12227178 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009407|toxin catabolic process GO:0009408|response to heat	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_00208	A	A1S	Potri.001G139100	Potri.001G139100(AS)	POPTR_0001s02150	sp|Q9QWZ1|RAD1_MOUSE	Cell cycle checkpoint protein RAD1 OS=Mus musculus GN=Rad1 PE=1 SV=1	AT4G17760.1	| Symbols: | damaged DNA binding;exodeoxyribonuclease IIIs | chr4:9871820-9873257 FORWARD LENGTH=300	LOC_Os06g04190.1	protein|rad1, putative, expressed	NA	NA	GO:0006261|DNA-dependent DNA replication GO:0006281|DNA repair	GO:0003684|damaged DNA binding GO:0008853|exodeoxyribonuclease III activity	GO:0005634|nucleus
pt2_00209	A	A1S	Potri.001G139200	Potri.001G139200(AS)	POPTR_0001s02160	sp|Q9SSR4|PPR77_ARATH	Pentatricopeptide repeat-containing protein At1g52620 OS=Arabidopsis thaliana GN=At1g52620 PE=2 SV=1	AT1G52620.1	| Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:19603828-19606287 FORWARD LENGTH=819	LOC_Os11g04295.1	protein|pentatricopeptide repeat domain containing protein, putative, expressed	IMGA|Medtr5g090210.1	Pentatricopeptide repeat-containing protein chr5 38260030-38262180 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_00210	A	A1S	Potri.001G139300	Potri.001G139300(AS)	POPTR_0001s02170	sp|Q9LFC5|PP360_ARATH	Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1	AT5G01110.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:42114-44303 REVERSE LENGTH=729	LOC_Os07g42354.1	protein|PPR repeat domain containing protein, putative, expressed	IMGA|Medtr5g029690.1	Pentatricopeptide repeat-containing protein chr5 12239519-12233813 H EGN_Mt100125 20111014	NA	NA	GO:0005739|mitochondrion
pt2_00211	A	A1S	Potri.001G139400	Potri.001G139400(AS)	POPTR_0001s02180	sp|Q9JI90|RNF14_MOUSE	E3 ubiquitin-protein ligase RNF14 OS=Mus musculus GN=Rnf14 PE=2 SV=2	AT1G32340.1	| Symbols: NHL8 | NDR1/HIN1-like 8 | chr1:11663462-11666037 REVERSE LENGTH=688	LOC_Os04g50720.1	protein|ara54-like RING finger protein, putative, expressed	IMGA|Medtr5g029700.1	E3 ubiquitin-protein ligase RNF14 chr5 12248171-12241203 E EGN_Mt100125 20111014	GO:0006487|protein N-linked glycosylation GO:0006499|N-terminal protein myristoylation GO:0008150|biological_process GO:0009610|response to symbiotic fungus	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_00212	A	A1S	Potri.001G139500	Potri.001G139500(AS)	POPTR_0001s02190	sp|O23617|TPS5_ARATH	Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5 OS=Arabidopsis thaliana GN=TPS5 PE=1 SV=2	AT4G17770.1	| Symbols: ATTPS5, TPS5 | trehalose phosphatase/synthase 5 | chr4:9877055-9880084 FORWARD LENGTH=862	LOC_Os09g23350.1	protein|trehalose synthase, putative, expressed	IMGA|contig_56897_1.1	Trehalose 6-phosphate synthase contig_56897 3087-717 H PREDN 20111014	GO:0000023|maltose metabolic process GO:0005992|trehalose biosynthetic process GO:0008152|metabolic process GO:0019252|starch biosynthetic process GO:0043085|positive regulation of catalytic activity	GO:0003824|catalytic activity GO:0004805|trehalose-phosphatase activity GO:0016757|transferase activity, transferring glycosyl groups	NA
pt2_00213	A	A1S	Potri.001G139600	Potri.001G139600(AS)	POPTR_0001s02200	sp|Q8LPK2|AB2B_ARATH	ABC transporter B family member 2 OS=Arabidopsis thaliana GN=ABCB2 PE=1 SV=3	AT4G25960.1	| Symbols: PGP2 | P-glycoprotein 2 | chr4:13177438-13183425 FORWARD LENGTH=1273	LOC_Os02g46680.1	protein|multidrug resistance protein, putative, expressed	IMGA|Medtr5g029750.1	ABC transporter B family member chr5 12267596-12276446 E EGN_Mt100125 20111014	GO:0006200|ATP catabolic process GO:0006810|transport GO:0010048|vernalization response GO:0010315|auxin efflux GO:0010540|basipetal auxin transport GO:0010541|acropetal auxin transport GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0048440|carpel development GO:0055085|transmembrane transport	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0005886|plasma membrane GO:0009507|chloroplast GO:0016020|membrane GO:0016021|integral to membrane
pt2_00214	A	A1S	Potri.001G139700	Potri.001G139700(AS)	POPTR_0001s02220	sp|Q8LPK2|AB2B_ARATH	ABC transporter B family member 2 OS=Arabidopsis thaliana GN=ABCB2 PE=1 SV=3	AT4G25960.1	| Symbols: PGP2 | P-glycoprotein 2 | chr4:13177438-13183425 FORWARD LENGTH=1273	LOC_Os02g46680.1	protein|multidrug resistance protein, putative, expressed	IMGA|Medtr5g029750.1	ABC transporter B family member chr5 12267596-12276446 E EGN_Mt100125 20111014	GO:0006200|ATP catabolic process GO:0006810|transport GO:0010048|vernalization response GO:0010315|auxin efflux GO:0010540|basipetal auxin transport GO:0010541|acropetal auxin transport GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0048440|carpel development GO:0055085|transmembrane transport	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0005886|plasma membrane GO:0009507|chloroplast GO:0016020|membrane GO:0016021|integral to membrane
pt2_00215	A	A2S	Potri.001G139800	Potri.001G139800(AS) Potri.003G094300(DS)	POPTR_0001s02230	NA	NA	AT3G57280.1	| Symbols: | Transmembrane proteins 14C | chr3:21193960-21195547 FORWARD LENGTH=226	LOC_Os04g39450.2	protein|expressed protein	NA	NA	GO:0008150|biological_process GO:0009627|systemic acquired resistance GO:0034976|response to endoplasmic reticulum stress	NA	GO:0009507|chloroplast GO:0009536|plastid GO:0009706|chloroplast inner membrane GO:0009941|chloroplast envelope GO:0016020|membrane
pt2_00216	A	A1S	Potri.001G139900	Potri.001G139900(AS)	POPTR_0001s02240	sp|Q8GWP0|MYB39_ARATH	Transcription factor MYB39 OS=Arabidopsis thaliana GN=MYB39 PE=2 SV=1	AT5G16770.2	| Symbols: AtMYB9, MYB9 | myb domain protein 9 | chr5:5515209-5516734 FORWARD LENGTH=336	LOC_Os06g11780.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr5g029840.1	Myb-like transcription factor chr5 12304553-12305846 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009737|response to abscisic acid stimulus	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00217	A	A1S	Potri.001G140000	Potri.001G140000(AS)	POPTR_0001s02250	sp|Q84Y01|ITPK1_MAIZE	Inositol-tetrakisphosphate 1-kinase 1 OS=Zea mays GN=ITPK1 PE=2 SV=1	AT5G16760.1	| Symbols: | Inositol 1,3,4-trisphosphate 5/6-kinase family protein | chr5:5509890-5510849 FORWARD LENGTH=319	LOC_Os10g42550.1	protein|Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed	IMGA|Medtr5g005370.1	Inositol-tetrakisphosphate 1-kinase chr5 145991-152030 E EGN_Mt100125 20111014	GO:0010264|myo-inositol hexakisphosphate biosynthetic process GO:0052746|inositol phosphorylation	GO:0000287|magnesium ion binding GO:0003824|catalytic activity GO:0005524|ATP binding GO:0046872|metal ion binding GO:0047325|inositol tetrakisphosphate 1-kinase activity GO:0052725|inositol-1,3,4-trisphosphate 6-kinase activity GO:0052726|inositol-1,3,4-trisphosphate 5-kinase activity	GO:0005622|intracellular GO:0005829|cytosol
pt2_00218	A	A1S	Potri.001G140200	Potri.001G140200(AS)	POPTR_0001s02260	sp|Q8L586|Y4958_ARATH	Uncharacterized membrane protein At4g09580 OS=Arabidopsis thaliana GN=At4g09580 PE=1 SV=1	AT4G17790.1	| Symbols: | SNARE associated Golgi protein family | chr4:9891425-9892675 FORWARD LENGTH=264	LOC_Os02g46660.1	protein|SNARE associated Golgi protein, putative, expressed	IMGA|Medtr5g029890.1	"Membrane protein, putative" chr5 12321066-12324419 F EGN_Mt100125 20111014	GO:0006661|phosphatidylinositol biosynthetic process GO:0008150|biological_process	NA	NA
pt2_00219	A	A2S	Potri.001G140300	Potri.001G140300(AS) Potri.003G093900(DS)	POPTR_0001s02270	sp|Q8C5L7|RBM34_MOUSE	RNA-binding protein 34 OS=Mus musculus GN=Rbm34 PE=1 SV=1	AT5G46840.1	| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr5:19005651-19007609 FORWARD LENGTH=501	LOC_Os03g63730.1	protein|RNA recognition motif containing protein, putative, expressed	IMGA|Medtr5g029900.1	RNA-binding protein chr5 12331050-12325463 F EGN_Mt100125 20111014	GO:0006312|mitotic recombination GO:0009560|embryo sac egg cell differentiation	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005737|cytoplasm
pt2_00220	A	A1S	Potri.001G140400	Potri.001G140400(AS)	POPTR_0001s02280	NA	NA	NA	NA	NA	NA	NA	NA	GO:0016126|sterol biosynthetic process GO:0052541|plant-type cell wall cellulose metabolic process GO:0052546|cell wall pectin metabolic process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00221	A	A1S	Potri.001G140500	Potri.001G140500(AS)	POPTR_0001s02290	NA	NA	AT4G17940.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:9965787-9966778 FORWARD LENGTH=274	LOC_Os10g42610.1	protein|expressed protein	IMGA|Medtr5g029910.1	TPR domain protein chr5 12337535-12336140 E EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0009507|chloroplast
pt2_00222	A	A1S	Potri.001G140600	Potri.001G140600(AS)	POPTR_0001s02300	sp|P43903|QOR_PSEAE	Quinone oxidoreductase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=qor PE=3 SV=2	AT5G61510.1	| Symbols: | GroES-like zinc-binding alcohol dehydrogenase family protein | chr5:24737084-24738975 REVERSE LENGTH=406	LOC_Os03g01190.1	protein|dehydrogenase, putative, expressed	IMGA|contig_75559_1.1	Alcohol dehydrogenase zinc-binding contig_75559 202-4045 E PREDN 20111014	GO:0009644|response to high light intensity GO:0030154|cell differentiation GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0008270|zinc ion binding GO:0016491|oxidoreductase activity	GO:0005829|cytosol GO:0009507|chloroplast
pt2_00223	A	A1S	Potri.001G140700	Potri.001G140700(AS)	POPTR_0001s02320	sp|Q500U8|TKPR1_ARATH	Tetraketide alpha-pyrone reductase 1 OS=Arabidopsis thaliana GN=TKPR1 PE=2 SV=1	AT2G23910.1	| Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr2:10177902-10179789 FORWARD LENGTH=304	LOC_Os10g42620.1	protein|dihydroflavonol-4-reductase, putative, expressed	IMGA|Medtr5g029990.1	Dihydroflavonol-4-reductase chr5 12359202-12361970 F EGN_Mt100125 20111014	GO:0009744|response to sucrose stimulus GO:0009809|lignin biosynthetic process GO:0009813|flavonoid biosynthetic process GO:0010224|response to UV-B GO:0044237|cellular metabolic process GO:0080167|response to karrikin	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0016621|cinnamoyl-CoA reductase activity GO:0050662|coenzyme binding	GO:0005575|cellular_component
pt2_00224	A	A1S	Potri.001G140800	Potri.001G140800(AS)	POPTR_0001s02330	sp|Q84UQ3|C3H56_ORYSJ	Zinc finger CCCH domain-containing protein 56 OS=Oryza sativa subsp. japonica GN=Os08g0159800 PE=2 SV=1	AT1G32360.1	| Symbols: | Zinc finger (CCCH-type) family protein | chr1:11673325-11675162 FORWARD LENGTH=384	LOC_Os08g06330.1	protein|zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent	GO:0003676|nucleic acid binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_00225	A	A2S	Potri.001G140900	Potri.001G140900(AS) Potri.003G093500(DS)	POPTR_0001s02340	sp|O49691|ATL29_ARATH	RING-H2 finger protein ATL29 OS=Arabidopsis thaliana GN=ATL29 PE=2 SV=1	AT4G17920.1	| Symbols: | RING/U-box superfamily protein | chr4:9963221-9964090 REVERSE LENGTH=289	LOC_Os02g52210.2	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr5g076990.1	RING finger-like protein chr5 31845406-31846326 H EGN_Mt100125 20111014	NA	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_00226	A	A1S	Potri.001G141100	Potri.001G141100(AS)	POPTR_0001s02350	sp|Q56XR0|BH071_ARATH	Transcription factor bHLH71 OS=Arabidopsis thaliana GN=BHLH71 PE=1 SV=1	AT5G46690.1	| Symbols: bHLH071 | beta HLH protein 71 | chr5:18945639-18947434 FORWARD LENGTH=327	LOC_Os02g46560.1	protein|helix-loop-helix DNA-binding protein, putative, expressed	IMGA|Medtr1g082480.1	Transcription factor bHLH94 chr1 21189984-21188661 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00227	A	A2S	Potri.001G141200	Potri.001G141200(AS) Potri.003G093100(DS)	POPTR_0001s02360	sp|Q7XLY8|ATL41_ORYSJ	E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica GN=Os04g0590900 PE=2 SV=2	AT5G17600.1	| Symbols: | RING/U-box superfamily protein | chr5:5800029-5801117 REVERSE LENGTH=362	LOC_Os02g46600.1	protein|RING-H2 finger protein ATL5G, putative, expressed	IMGA|Medtr5g030010.1	RING-H2 finger protein ATL3A chr5 12371490-12365294 E EGN_Mt100125 20111014	GO:0080167|response to karrikin	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_00228	A	A1S	Potri.001G141300	Potri.001G141300(AS)	POPTR_0001s02370	sp|P19684|ROC5_NICSY	33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1	AT2G35410.1	| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr2:14898341-14899590 FORWARD LENGTH=308	LOC_Os04g50110.1	protein|RNA recognition motif containing protein, putative, expressed	IMGA|Medtr5g030020.1	31 kDa ribonucleoprotein chr5 12380552-12375117 F EGN_Mt100125 20111014	GO:0006364|rRNA processing GO:0009902|chloroplast relocation GO:0010027|thylakoid membrane organization GO:0015979|photosynthesis GO:0015995|chlorophyll biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0034660|ncRNA metabolic process GO:0042793|transcription from plastid promoter	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009579|thylakoid
pt2_00229	A	A1S	Potri.001G141400	Potri.001G141400(AS)	POPTR_0001s02380	NA	NA	AT5G46700.1	| Symbols: TET1, TRN2 | Tetraspanin family protein | chr5:18951035-18952439 FORWARD LENGTH=269	LOC_Os03g01012.1	protein|tetraspanin family protein, putative, expressed	IMGA|Medtr5g030070.1	hypothetical protein chr5 12391997-12393827 F EGN_Mt100125 20111014	GO:0007389|pattern specification process GO:0007568|aging GO:0008361|regulation of cell size GO:0009855|determination of bilateral symmetry GO:0009926|auxin polar transport GO:0009933|meristem structural organization GO:0009944|polarity specification of adaxial/abaxial axis GO:0009956|radial pattern formation GO:0010014|meristem initiation GO:0010015|root morphogenesis GO:0010051|xylem and phloem pattern formation GO:0010073|meristem maintenance GO:0010075|regulation of meristem growth GO:0010305|leaf vascular tissue pattern formation GO:0019344|cysteine biosynthetic process GO:0040007|growth	GO:0003674|molecular_function	GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016021|integral to membrane
pt2_00230	A	A1S	Potri.001G141500	Potri.001G141500(AS)	POPTR_0001s02390	NA	NA	AT4G17900.1	| Symbols: | PLATZ transcription factor family protein | chr4:9946046-9947697 FORWARD LENGTH=227	LOC_Os02g46610.1	protein|zinc-binding protein, putative, expressed	IMGA|Medtr5g030130.1	hypothetical protein chr5 12420913-12419244 F EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005739|mitochondrion
pt2_00231	A	A1S	Potri.001G141600	Potri.001G141600(AS)	POPTR_0001s02400	NA	NA	AT1G32690.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35200.1); Has 45 Blast hits to 45 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:11821079-11821681 REVERSE LENGTH=200	NA	NA	IMGA|Medtr5g030210.1	hypothetical protein chr5 12462695-12463511 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_00232	A	A1S	Potri.001G141900	Potri.001G141900(AS)	POPTR_0001s02410	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00233	A	A1S	Potri.001G142000	Potri.001G142000(AS)	POPTR_0001s02420	sp|Q9FIQ1|UBP21_ARATH	Ubiquitin carboxyl-terminal hydrolase 21 OS=Arabidopsis thaliana GN=UBP21 PE=2 SV=1	AT5G46740.1	| Symbols: UBP21 | ubiquitin-specific protease 21 | chr5:18965410-18968492 REVERSE LENGTH=732	LOC_Os02g55180.2	protein|ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed	IMGA|Medtr5g030360.2	Ubiquitin carboxyl-terminal hydrolase chr5 12508488-12504846 E EGN_Mt100125 20111014	GO:0006511|ubiquitin-dependent protein catabolic process GO:0009165|nucleotide biosynthetic process	GO:0004221|ubiquitin thiolesterase activity GO:0004843|ubiquitin-specific protease activity	GO:0005634|nucleus
pt2_00234	A	A1S	Potri.001G142100	Potri.001G142100(AS)	POPTR_0001s02430	sp|Q8H100|AGD8_ARATH	Probable ADP-ribosylation factor GTPase-activating protein AGD8 OS=Arabidopsis thaliana GN=AGD8 PE=1 SV=1	AT4G17890.1	| Symbols: AGD8 | ARF-GAP domain 8 | chr4:9937121-9939146 FORWARD LENGTH=413	LOC_Os03g63710.1	protein|GTPase-activating protein, putative, expressed	NA	NA	GO:0032312|regulation of ARF GTPase activity	GO:0003677|DNA binding GO:0008060|ARF GTPase activator activity GO:0008270|zinc ion binding	GO:0005634|nucleus GO:0005829|cytosol
pt2_00235	G	G1	NA	NA	POPTR_0001s02440	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00236	B	B1S	Potri.001G142200	Potri.001G142200(BS)	POPTR_0001s02450	sp|Q39204|RAP1_ARATH	Transcription factor MYC2 OS=Arabidopsis thaliana GN=RAP1 PE=1 SV=2	AT1G32640.1	| Symbols: ATMYC2, RD22BP1, JAI1, JIN1, MYC2, ZBF1 | Basic helix-loop-helix (bHLH) DNA-binding family protein | chr1:11799042-11800913 REVERSE LENGTH=623	LOC_Os10g42430.1	protein|transcription factor MYC7E, putative, expressed	IMGA|Medtr5g030430.1	BHLH transcription factor chr5 12542132-12544882 E EGN_Mt100125 20111014	GO:0006568|tryptophan metabolic process GO:0006612|protein targeting to membrane GO:0009269|response to desiccation GO:0009611|response to wounding GO:0009620|response to fungus GO:0009694|jasmonic acid metabolic process GO:0009695|jasmonic acid biosynthetic process GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009753|response to jasmonic acid stimulus GO:0009759|indole glucosinolate biosynthetic process GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010200|response to chitin GO:0010363|regulation of plant-type hypersensitive response GO:0043069|negative regulation of programmed cell death GO:0043619|regulation of transcription from RNA polymerase II promoter in response to oxidative stress GO:0045893|positive regulation of transcription, DNA-dependent GO:0048364|root development GO:0051090|regulation of sequence-specific DNA binding transcription factor activity GO:2000068|regulation of defense response to insect	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_00237	G	G1	NA	NA	POPTR_0001s02460	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00238	A	A1S	Potri.001G142300	Potri.001G142300(AS)	POPTR_0001s02470	NA	NA	NA	NA	NA	NA	IMGA|Medtr5g030480.1	hypothetical protein chr5 12560916-12557499 E EGN_Mt100125 20111014	NA	NA	NA
pt2_00239	A	A1S	Potri.001G142400	Potri.001G142400(AS)	POPTR_0001s02480	NA	NA	AT2G35230.1	| Symbols: IKU1 | VQ motif-containing protein | chr2:14842871-14844079 FORWARD LENGTH=402	NA	NA	IMGA|Medtr5g030570.1	hypothetical protein chr5 12599543-12600590 E EGN_Mt100125 20111014	GO:0009960|endosperm development GO:0051645|Golgi localization GO:0051646|mitochondrion localization GO:0060151|peroxisome localization GO:0080113|regulation of seed growth	GO:0003674|molecular_function	GO:0005634|nucleus GO:0043078|polar nucleus
pt2_00240	A	A1S	Potri.001G142500	Potri.001G142500(AS)	POPTR_0001s02490	sp|O49686|PYR1_ARATH	Abscisic acid receptor PYR1 OS=Arabidopsis thaliana GN=PYR1 PE=1 SV=1	AT4G17870.1	| Symbols: PYR1, RCAR11 | Polyketide cyclase/dehydrase and lipid transport superfamily protein | chr4:9928792-9929367 FORWARD LENGTH=191	LOC_Os10g42280.1	protein|cyclase/dehydrase family protein, putative, expressed	IMGA|Medtr5g030500.1	Abscisic acid receptor PYR1 chr5 12575005-12572839 E EGN_Mt100125 20111014	GO:0009738|abscisic acid mediated signaling pathway GO:0010029|regulation of seed germination GO:0080163|regulation of protein serine/threonine phosphatase activity	GO:0004872|receptor activity GO:0005515|protein binding GO:0010427|abscisic acid binding GO:0042803|protein homodimerization activity	GO:0005634|nucleus
pt2_00241	A	A1S	Potri.001G142600	Potri.001G142600(AS)	POPTR_0001s02500	sp|Q93XM7|MCAT_ARATH	Mitochondrial carnitine/acylcarnitine carrier-like protein OS=Arabidopsis thaliana GN=BOU PE=1 SV=1	AT5G46800.1	| Symbols: BOU | Mitochondrial substrate carrier family protein | chr5:18988779-18989810 REVERSE LENGTH=300	LOC_Os10g42299.3	protein|mitochondrial carrier protein, putative, expressed	IMGA|Medtr5g030530.1	Mitochondrial carnitine/acylcarnitine carrier-like protein chr5 12590466-12586303 E EGN_Mt100125 20111014	GO:0006810|transport GO:0006839|mitochondrial transport GO:0015822|ornithine transport GO:0055085|transmembrane transport	GO:0005215|transporter activity	GO:0005739|mitochondrion GO:0005743|mitochondrial inner membrane GO:0009507|chloroplast GO:0009536|plastid
pt2_00242	A	A1S	Potri.001G142700	Potri.001G142700(AS)	POPTR_0001s02510	NA	NA	AT2G35290.1	| Symbols: | unknown protein; Has 39 Blast hits to 39 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:14861635-14862000 REVERSE LENGTH=121	LOC_Os03g07400.1	protein|expressed protein	IMGA|Medtr5g014370.1	hypothetical protein chr5 4566664-4567372 F EGN_Mt100125 20111014	GO:0008150|biological_process GO:0009741|response to brassinosteroid stimulus	GO:0003674|molecular_function	NA
pt2_00243	A	A1S	Potri.001G142800	Potri.001G142800(AS)	POPTR_0001s02520	sp|Q9S7C9|ESCA_ARATH	Putative DNA-binding protein ESCAROLA OS=Arabidopsis thaliana GN=ESC PE=2 SV=1	AT4G17800.1	| Symbols: | Predicted AT-hook DNA-binding family protein | chr4:9895549-9896427 REVERSE LENGTH=292	LOC_Os04g50030.1	protein|DNA binding protein, putative, expressed	IMGA|Medtr5g091630.1	hypothetical protein chr5 38920717-38921481 H EGN_Mt100125 20111014	GO:0000041|transition metal ion transport GO:0008150|biological_process GO:0009407|toxin catabolic process GO:0010359|regulation of anion channel activity GO:0010583|response to cyclopentenone	NA	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_00244	A	A1S	Potri.001G142900	Potri.001G142900(AS)	POPTR_0001s02530	sp|Q9LHS9|RBE_ARATH	Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana GN=RBE PE=2 SV=2	AT4G17810.1	| Symbols: | C2H2 and C2HC zinc fingers superfamily protein | chr4:9906918-9907532 FORWARD LENGTH=204	LOC_Os05g20930.1	protein|ZOS5-07 - C2H2 zinc finger protein, expressed	IMGA|Medtr5g014400.1	Zinc finger (C2H2 type) containing protein chr5 4573945-4574700 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006417|regulation of translation GO:0009657|plastid organization GO:0009965|leaf morphogenesis GO:0030154|cell differentiation GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003676|nucleic acid binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_00245	A	A3S	Potri.001G143000	Potri.001G143000(AS) Potri.003G144900(BS) Potri.001G086000(DS)	POPTR_0001s02540	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00246	A	A1S	Potri.001G143100	Potri.001G143100(AS)	POPTR_0001s02550	sp|Q8LPQ8|MSSP2_ARATH	Monosaccharide-sensing protein 2 OS=Arabidopsis thaliana GN=MSSP2 PE=2 SV=2	AT4G35300.3	| Symbols: | tonoplast monosaccharide transporter2 | chr4:16796432-16799071 REVERSE LENGTH=729	LOC_Os10g39440.2	protein|transporter family protein, putative, expressed	IMGA|Medtr5g024740.1	Monosaccharide-sensing protein chr5 9697538-9692309 E EGN_Mt100125 20111014	GO:0006810|transport GO:0055085|transmembrane transport	GO:0005215|transporter activity GO:0005337|nucleoside transmembrane transporter activity GO:0005351|sugar:hydrogen symporter activity GO:0015144|carbohydrate transmembrane transporter activity GO:0022857|transmembrane transporter activity GO:0022891|substrate-specific transmembrane transporter activity	GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0016020|membrane GO:0016021|integral to membrane
pt2_00247	A	A2S	Potri.001G143200	Potri.001G143200(AS) Potri.003G091100(DS)	POPTR_0001s02560	sp|P54638|ARGE_DICDI	Acetylornithine deacetylase OS=Dictyostelium discoideum GN=argE PE=1 SV=2	AT4G17830.1	| Symbols: | Peptidase M20/M25/M40 family protein | chr4:9915916-9918049 FORWARD LENGTH=440	LOC_Os02g46520.1	protein|hydrolase, putative, expressed	IMGA|Medtr5g014410.1	N-acetylornithine deacetylase-like protein chr5 4590351-4594830 E EGN_Mt100125 20111014	GO:0006508|proteolysis GO:0008152|metabolic process	GO:0008237|metallopeptidase activity GO:0016787|hydrolase activity	GO:0005829|cytosol
pt2_00248	A	A1S	Potri.001G143400	Potri.001G143400(AS)	POPTR_0001s02570	NA	NA	AT2G35260.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17840.1); Has 42 Blast hits to 42 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:14849642-14851601 FORWARD LENGTH=382	ChrSy.fgenesh.mRNA.82	protein|expressed protein	IMGA|Medtr5g014430.1	hypothetical protein chr5 4599998-4596922 F EGN_Mt100125 20111014	GO:0008150|biological_process GO:0010155|regulation of proton transport GO:0019761|glucosinolate biosynthetic process GO:0046777|protein autophosphorylation	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0016020|membrane
pt2_00249	A	A1S	Potri.001G143400	Potri.001G143400(AS)	POPTR_0001s02570	NA	NA	AT2G35260.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17840.1); Has 42 Blast hits to 42 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:14849642-14851601 FORWARD LENGTH=382	ChrSy.fgenesh.mRNA.82	protein|expressed protein	IMGA|Medtr5g014430.1	hypothetical protein chr5 4599998-4596922 F EGN_Mt100125 20111014	GO:0008150|biological_process GO:0010155|regulation of proton transport GO:0019761|glucosinolate biosynthetic process GO:0046777|protein autophosphorylation	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0016020|membrane
pt2_00250	C	C1S	Potri.001G143400	Potri.001G143400(CS)	NA	NA	AT2G35260.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17840.1); Has 42 Blast hits to 42 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:14849642-14851601 FORWARD LENGTH=382	ChrSy.fgenesh.mRNA.82	protein|expressed protein	IMGA|Medtr5g014430.1	hypothetical protein chr5 4599998-4596922 F EGN_Mt100125 20111014	GO:0008150|biological_process GO:0010155|regulation of proton transport GO:0019761|glucosinolate biosynthetic process GO:0046777|protein autophosphorylation	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0016020|membrane
pt2_00251	A	A1A	Potri.001G143400	Potri.001G143400(AA)	POPTR_0001s02580	NA	NA	AT2G35260.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17840.1); Has 42 Blast hits to 42 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:14849642-14851601 FORWARD LENGTH=382	ChrSy.fgenesh.mRNA.82	protein|expressed protein	IMGA|Medtr5g014430.1	hypothetical protein chr5 4599998-4596922 F EGN_Mt100125 20111014	GO:0008150|biological_process GO:0010155|regulation of proton transport GO:0019761|glucosinolate biosynthetic process GO:0046777|protein autophosphorylation	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0016020|membrane
pt2_00252	A	A1S	Potri.001G143500	Potri.001G143500(AS)	POPTR_0001s02600	sp|Q9S7C9|ESCA_ARATH	Putative DNA-binding protein ESCAROLA OS=Arabidopsis thaliana GN=ESC PE=2 SV=1	AT4G17950.1	| Symbols: | AT hook motif DNA-binding family protein | chr4:9967295-9969007 REVERSE LENGTH=439	LOC_Os10g42230.1	protein|AT hook motif domain containing protein, expressed	IMGA|contig_62590_1.1	AT-hook motif nuclear localized protein contig_62590 587-3109 E PREDN 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding	GO:0005634|nucleus GO:0005829|cytosol
pt2_00253	A	A2S	Potri.001G143600	Potri.001G143600(AS) Potri.003G090600(DS)	POPTR_0001s02620	NA	NA	AT4G17960.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G46620.1); Has 46 Blast hits to 45 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:9971154-9972227 FORWARD LENGTH=154	LOC_Os02g03575.1	protein|expressed protein	IMGA|Medtr5g014320.1	hypothetical protein chr5 4531997-4529088 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_00254	A	A1S	Potri.001G143700	Potri.001G143700(AS)	POPTR_0001s02630	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006970|response to osmotic stress GO:0009414|response to water deprivation GO:0009790|embryo development GO:0009793|embryo development ending in seed dormancy GO:0048316|seed development	GO:0003674|molecular_function	GO:0009506|plasmodesma
pt2_00255	A	A1S	Potri.001G143800	Potri.001G143800(AS)	POPTR_0001s02640	sp|P54672|AP2M_DICDI	AP-2 complex subunit mu OS=Dictyostelium discoideum GN=apm2 PE=2 SV=2	AT5G46630.1	| Symbols: | Clathrin adaptor complexes medium subunit family protein | chr5:18920580-18923252 FORWARD LENGTH=438	LOC_Os02g46510.1	protein|adaptor complexes medium subunit family domain containing protein, expressed	IMGA|Medtr5g014330.1	AP-2 complex subunit mu chr5 4542498-4534547 F EGN_Mt100125 20111014	GO:0006810|transport GO:0006886|intracellular protein transport GO:0016192|vesicle-mediated transport	NA	GO:0005829|cytosol GO:0005886|plasma membrane GO:0030125|clathrin vesicle coat GO:0030131|clathrin adaptor complex GO:0030132|clathrin coat of coated pit
pt2_00256	A	A1S	Potri.001G143900	Potri.001G143900(AS)	POPTR_0001s02650	sp|Q0J7V9|LSD1_ORYSJ	Protein LSD1 OS=Oryza sativa subsp. japonica GN=LSD1 PE=2 SV=1	AT1G32540.3	| Symbols: LOL1 | lsd one like 1 | chr1:11768043-11769591 FORWARD LENGTH=154	LOC_Os08g06280.7	protein|LSD1 zinc finger domain containing protein, expressed	NA	NA	GO:0009814|defense response, incompatible interaction GO:0034052|positive regulation of plant-type hypersensitive response GO:0043068|positive regulation of programmed cell death GO:2000121|regulation of removal of superoxide radicals	GO:0003677|DNA binding	GO:0005576|extracellular region
pt2_00257	B	B1S	Potri.001G144000	Potri.001G144000(BS)	POPTR_0001s02660	sp|Q58DB6|EYA2_BOVIN	Eyes absent homolog 2 OS=Bos taurus GN=EYA2 PE=2 SV=1	AT2G35320.1	| Symbols: ATEYA, EYA | EYES ABSENT homolog | chr2:14867074-14868387 REVERSE LENGTH=307	LOC_Os06g02028.1	protein|eyes absent homolog 4, putative, expressed	NA	NA	GO:0006470|protein dephosphorylation GO:0007275|multicellular organismal development	GO:0030946|protein tyrosine phosphatase activity, metal-dependent	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00258	A	A1S	Potri.001G144100	Potri.001G144100(AS)	POPTR_0001s02670	sp|P70587|LRRC7_RAT	Leucine-rich repeat-containing protein 7 OS=Rattus norvegicus GN=Lrrc7 PE=1 SV=2	AT4G35470.1	| Symbols: PIRL4 | plant intracellular ras group-related LRR 4 | chr4:16846531-16848448 FORWARD LENGTH=549	LOC_Os10g42190.2	protein|leucine rich repeat containing protein, expressed	IMGA|Medtr5g024780.1	Leucine-rich repeat-containing protein chr5 9726976-9724870 H EGN_Mt100125 20111014	GO:0008150|biological_process GO:0009740|gibberellic acid mediated signaling pathway GO:0010162|seed dormancy process	NA	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_00259	A	A2S	Potri.001G144200	Potri.001G144200(AS) Potri.003G090000(DS)	POPTR_0001s02680	sp|Q8RX22|MIP1_ARATH	MND1-interacting protein 1 OS=Arabidopsis thaliana GN=MIP1 PE=1 SV=1	AT2G35330.2	| Symbols: | RING/U-box superfamily protein | chr2:14869260-14871673 FORWARD LENGTH=711	LOC_Os09g20550.1	protein|zinc finger protein-related, putative, expressed	NA	NA	NA	GO:0008270|zinc ion binding	GO:0005737|cytoplasm
pt2_00260	A	A1S	Potri.001G144300	Potri.001G144300(AS)	POPTR_0001s02700	sp|O49696|ALMTC_ARATH	Aluminum-activated malate transporter 12 OS=Arabidopsis thaliana GN=ALMT12 PE=2 SV=1	AT4G17970.1	| Symbols: ALMT12, ATALMT12 | aluminum-activated, malate transporter 12 | chr4:9975482-9977722 FORWARD LENGTH=560	LOC_Os10g42180.1	protein|aluminum-activated malate transporter, putative, expressed	IMGA|Medtr5g014310.1	hypothetical protein chr5 4526352-4523171 H EGN_Mt100125 20111014	GO:0010044|response to aluminum ion	GO:0008509|anion transmembrane transporter activity	GO:0012505|endomembrane system
pt2_00261	A	A1S	Potri.001G144400	Potri.001G144400(AS)	POPTR_0001s02710	sp|Q7GCL7|NAC74_ORYSJ	NAC domain-containing protein 74 OS=Oryza sativa subsp. japonica GN=NAC74 PE=2 SV=1	AT4G17980.1	| Symbols: anac071, NAC071 | NAC domain containing protein 71 | chr4:9978850-9980038 REVERSE LENGTH=262	LOC_Os10g42130.1	protein|no apical meristem protein, putative, expressed	IMGA|Medtr5g014300.1	NAC domain protein chr5 4518895-4522641 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0007275|multicellular organismal development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00262	A	A1S	Potri.001G144500	Potri.001G144500(AS)	POPTR_0001s02730	sp|Q9LQK7|AB7I_ARATH	Protein ABCI7, chloroplastic OS=Arabidopsis thaliana GN=ABCI7 PE=1 SV=1	AT1G32500.1	| Symbols: ATNAP6, NAP6 | non-intrinsic ABC protein 6 | chr1:11750091-11751994 REVERSE LENGTH=475	LOC_Os01g03650.1	protein|sufB/sufD domain containing protein, putative, expressed	IMGA|Medtr5g014290.1	Protein ABCI7 chr5 4513363-4510073 F EGN_Mt100125 20111014	GO:0006364|rRNA processing GO:0006569|tryptophan catabolic process GO:0006810|transport GO:0009684|indoleacetic acid biosynthetic process GO:0009793|embryo development ending in seed dormancy GO:0009902|chloroplast relocation GO:0010027|thylakoid membrane organization GO:0010207|photosystem II assembly GO:0010228|vegetative to reproductive phase transition of meristem GO:0016226|iron-sulfur cluster assembly GO:0034660|ncRNA metabolic process GO:0035304|regulation of protein dephosphorylation GO:0042793|transcription from plastid promoter GO:0045893|positive regulation of transcription, DNA-dependent GO:0048481|ovule development	GO:0005215|transporter activity GO:0005515|protein binding	GO:0009507|chloroplast GO:0009536|plastid GO:0009570|chloroplast stroma
pt2_00263	A	A2S	Potri.001G144600	Potri.001G144600(AS) Potri.003G089600(DS)	POPTR_0001s02740	sp|Q9LS25|PP420_ARATH	Pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Arabidopsis thaliana GN=At5g46580 PE=2 SV=1	AT5G46580.1	| Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr5:18897510-18899645 REVERSE LENGTH=711	LOC_Os03g63910.1	protein|PPR repeat domain containing protein, putative, expressed	NA	NA	GO:0008150|biological_process GO:0009073|aromatic amino acid family biosynthetic process GO:0009793|embryo development ending in seed dormancy GO:0010103|stomatal complex morphogenesis GO:0016226|iron-sulfur cluster assembly GO:0045036|protein targeting to chloroplast	NA	GO:0009507|chloroplast
pt2_00264	A	A1S	Potri.001G144700	Potri.001G144700(AS)	POPTR_0001s02750	sp|O82302|P2C29_ARATH	Protein phosphatase 2C 29 OS=Arabidopsis thaliana GN=PLL1 PE=1 SV=2	AT2G35350.1	| Symbols: PLL1 | poltergeist like 1 | chr2:14881360-14884116 REVERSE LENGTH=783	LOC_Os02g46490.1	protein|protein phosphatase 2C, putative, expressed	IMGA|contig_113959_1.1	Protein phosphatase 2C contig_113959 455-2236 E PREDN 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006499|N-terminal protein myristoylation GO:0009826|unidimensional cell growth GO:0009933|meristem structural organization GO:0010074|maintenance of meristem identity GO:0018345|protein palmitoylation GO:0018377|protein myristoylation	GO:0003824|catalytic activity GO:0004722|protein serine/threonine phosphatase activity GO:0005543|phospholipid binding	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_00265	A	A1S	Potri.001G144800	Potri.001G144800(AS)	POPTR_0001s02770	sp|Q39732|GCSH_FLAAN	Glycine cleavage system H protein, mitochondrial OS=Flaveria anomala GN=GDCSH PE=2 SV=1	AT1G32470.1	| Symbols: | Single hybrid motif superfamily protein | chr1:11739479-11740246 REVERSE LENGTH=166	LOC_Os10g37180.1	protein|glycine cleavage system H protein, putative, expressed	IMGA|Medtr5g014260.1	Glycine cleavage system H protein chr5 4504957-4503621 F EGN_Mt100125 20111014	GO:0006098|pentose-phosphate shunt GO:0006364|rRNA processing GO:0006546|glycine catabolic process GO:0009657|plastid organization GO:0010103|stomatal complex morphogenesis GO:0010207|photosystem II assembly GO:0015979|photosynthesis GO:0019344|cysteine biosynthetic process GO:0019464|glycine decarboxylation via glycine cleavage system GO:0019684|photosynthesis, light reaction	GO:0004375|glycine dehydrogenase (decarboxylating) activity	GO:0005739|mitochondrion GO:0005960|glycine cleavage complex GO:0009507|chloroplast
pt2_00266	A	A1S	Potri.001G145000	Potri.001G145000(AS)	POPTR_0001s02780	NA	NA	NA	NA	NA	NA	NA	NA	GO:0009686|gibberellin biosynthetic process GO:0055114|oxidation-reduction process	GO:0004497|monooxygenase activity GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding GO:0051777|ent-kaurenoate oxidase activity	GO:0005739|mitochondrion GO:0005783|endoplasmic reticulum
pt2_00267	B	B1S	Potri.001G145100	Potri.001G145100(BS)	POPTR_0001s02790	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00268	A	A1S	Potri.001G145100	Potri.001G145100(AS)	POPTR_0001s02790	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00269	C	C1S	Potri.001G145200	Potri.001G145200(CS)	sp|Q9LQL2|PTR14_ARATH	Nitrate transporter 1.5 OS=Arabidopsis thaliana GN=NRT1.5 PE=1 SV=2	AT1G32450.1	| Symbols: NRT1.5 | nitrate transporter 1.5 | chr1:11715337-11719807 REVERSE LENGTH=614	LOC_Os02g48570.1	protein|peptide transporter PTR2, putative, expressed	IMGA|Medtr5g014150.1	Peptide transporter PTR1 chr5 4456453-4450964 E EGN_Mt100125 20111014	GO:0006598|polyamine catabolic process GO:0006826|iron ion transport GO:0006857|oligopeptide transport GO:0009698|phenylpropanoid metabolic process GO:0009734|auxin mediated signaling pathway GO:0010106|cellular response to iron ion starvation GO:0010167|response to nitrate GO:0015698|inorganic anion transport GO:0015706|nitrate transport GO:0042398|cellular modified amino acid biosynthetic process	GO:0005215|transporter activity GO:0015112|nitrate transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_00270	A	A1S	Potri.001G145200	Potri.001G145200(AS)	POPTR_0001s02810	sp|Q9LQL2|PTR14_ARATH	Nitrate transporter 1.5 OS=Arabidopsis thaliana GN=NRT1.5 PE=1 SV=2	AT1G32450.1	| Symbols: NRT1.5 | nitrate transporter 1.5 | chr1:11715337-11719807 REVERSE LENGTH=614	LOC_Os02g48570.1	protein|peptide transporter PTR2, putative, expressed	IMGA|Medtr5g014150.1	Peptide transporter PTR1 chr5 4456453-4450964 E EGN_Mt100125 20111014	GO:0006598|polyamine catabolic process GO:0006826|iron ion transport GO:0006857|oligopeptide transport GO:0009698|phenylpropanoid metabolic process GO:0009734|auxin mediated signaling pathway GO:0010106|cellular response to iron ion starvation GO:0010167|response to nitrate GO:0015698|inorganic anion transport GO:0015706|nitrate transport GO:0042398|cellular modified amino acid biosynthetic process	GO:0005215|transporter activity GO:0015112|nitrate transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_00271	A	A1S	Potri.001G145300	Potri.001G145300(AS)	POPTR_0001s02820	sp|Q40546|KPYG_TOBAC	Pyruvate kinase isozyme G, chloroplastic OS=Nicotiana tabacum PE=2 SV=1	AT1G32440.1	| Symbols: PKp3 | plastidial pyruvate kinase 3 | chr1:11712205-11714963 FORWARD LENGTH=571	LOC_Os10g42100.1	protein|pyruvate kinase, putative, expressed	IMGA|Medtr5g014140.1	Pyruvate kinase chr5 4444843-4450264 H EGN_Mt100125 20111014	GO:0006096|glycolysis GO:0006633|fatty acid biosynthetic process	GO:0000287|magnesium ion binding GO:0003824|catalytic activity GO:0004743|pyruvate kinase activity GO:0030955|potassium ion binding	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_00272	A	A1S	Potri.001G145400	Potri.001G145400(AS)	POPTR_0001s02830	NA	NA	AT3G57990.1	| Symbols: | unknown protein; Has 1497 Blast hits to 1323 proteins in 52 species: Archae - 0; Bacteria - 4; Metazoa - 23; Fungi - 34; Plants - 61; Viruses - 0; Other Eukaryotes - 1375 (source: NCBI BLink). | chr3:21470244-21471347 REVERSE LENGTH=367	NA	NA	IMGA|Medtr5g014110.1	hypothetical protein chr5 4431866-4427268 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_00273	A	A1S	Potri.001G145500	Potri.001G145500(AS)	POPTR_0001s02840	NA	NA	AT1G32370.1	| Symbols: TOM2B, TTM1 | tobamovirus multiplication 2B | chr1:11677005-11677929 FORWARD LENGTH=122	LOC_Os02g17850.1	protein|TOM2B, putative, expressed	NA	NA	GO:0046786|viral replication complex formation and maintenance	GO:0003674|molecular_function	NA
pt2_00274	A	A2S	Potri.001G145600	Potri.001G145600(AS) Potri.001G145500(AA)	POPTR_0001s02850	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00275	A	A1S	Potri.001G145700	Potri.001G145700(AS)	POPTR_0001s02860	sp|Q42581|KPRS1_ARATH	Ribose-phosphate pyrophosphokinase 1, chloroplastic OS=Arabidopsis thaliana GN=PRS1 PE=2 SV=2	AT2G35390.2	| Symbols: | Phosphoribosyltransferase family protein | chr2:14895528-14897581 REVERSE LENGTH=403	LOC_Os02g03540.1	protein|phosphoribosyl transferase, putative, expressed	IMGA|Medtr5g033300.1	Ribose-phosphate pyrophosphokinase chr5 13937016-13941484 F EGN_Mt100125 20111014	GO:0006783|heme biosynthetic process GO:0009116|nucleoside metabolic process GO:0009156|ribonucleoside monophosphate biosynthetic process GO:0009165|nucleotide biosynthetic process GO:0044249|cellular biosynthetic process	GO:0000287|magnesium ion binding GO:0004749|ribose phosphate diphosphokinase activity	GO:0009507|chloroplast
pt2_00276	A	A1S	Potri.001G145800	Potri.001G145800(AS)	POPTR_0001s02870	sp|Q9SLH7|PER20_ARATH	Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=2 SV=1	AT2G35380.1	| Symbols: | Peroxidase superfamily protein | chr2:14892636-14893958 FORWARD LENGTH=336	LOC_Os01g15830.1	protein|peroxidase precursor, putative, expressed	IMGA|Medtr5g014100.1	Peroxidase chr5 4425066-4426777 E EGN_Mt100125 20111014	GO:0000041|transition metal ion transport GO:0006979|response to oxidative stress GO:0055114|oxidation-reduction process	GO:0004601|peroxidase activity GO:0020037|heme binding	GO:0005576|extracellular region
pt2_00277	A	A1S	Potri.001G145900	Potri.001G145900(AS)	POPTR_0001s02880	sp|Q9FUR2|IP5P2_ARATH	Type I inositol 1,4,5-trisphosphate 5-phosphatase 2 OS=Arabidopsis thaliana GN=IP5P2 PE=1 SV=2	AT4G18010.2	| Symbols: IP5PII | myo-inositol polyphosphate 5-phosphatase 2 | chr4:9991194-9994099 REVERSE LENGTH=613	LOC_Os01g51890.1	protein|endonuclease/exonuclease/phosphatase family domain containing protein, expressed	IMGA|Medtr5g014090.1	"Type I inositol-1,4,5-trisphosphate 5-phosphatase" chr5 4419701-4423653 F EGN_Mt100125 20111014	GO:0007165|signal transduction GO:0009414|response to water deprivation GO:0009611|response to wounding GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009753|response to jasmonic acid stimulus GO:0009845|seed germination GO:0032957|inositol trisphosphate metabolic process GO:0042538|hyperosmotic salinity response GO:0046854|phosphatidylinositol phosphorylation GO:0046855|inositol phosphate dephosphorylation GO:0052542|defense response by callose deposition	GO:0004445|inositol-polyphosphate 5-phosphatase activity	GO:0005737|cytoplasm
pt2_00278	A	A1S	Potri.001G146000	Potri.001G146000(AS)	POPTR_0001s02890	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00279	A	A2S	Potri.001G146100	Potri.001G146100(AS) Potri.003G087800(BS)	POPTR_0001s02900	NA	NA	AT1G32400.3	| Symbols: TOM2A | tobamovirus multiplication 2A | chr1:11689393-11690873 REVERSE LENGTH=280	LOC_Os08g18044.2	protein|tetraspanin family protein, putative, expressed	IMGA|Medtr5g014080.2	GMFP4 chr5 4402853-4408473 F EGN_Mt100125 20111014	GO:0046786|viral replication complex formation and maintenance	GO:0005515|protein binding	GO:0005576|extracellular region GO:0005773|vacuole GO:0005794|Golgi apparatus GO:0009506|plasmodesma GO:0016020|membrane GO:0016021|integral to membrane
pt2_00280	A	A1S	Potri.001G146200	Potri.001G146200(AS)	POPTR_0001s02910	sp|Q6LA43|APRR2_ARATH	Two-component response regulator-like APRR2 OS=Arabidopsis thaliana GN=APRR2 PE=2 SV=2	AT4G18020.6	| Symbols: APRR2 | CheY-like two-component responsive regulator family protein | chr4:10003738-10006682 REVERSE LENGTH=535	LOC_Os06g24070.1	protein|myb-like DNA-binding domain containing protein, expressed	IMGA|Medtr5g014040.2	Two-component response regulator-like protein chr5 4383956-4388762 F EGN_Mt100125 20111014	GO:0000160|two-component signal transduction system (phosphorelay) GO:0006355|regulation of transcription, DNA-dependent GO:0007623|circadian rhythm GO:0009736|cytokinin mediated signaling pathway	GO:0000156|two-component response regulator activity GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_00281	A	A1S	Potri.001G146200	Potri.001G146200(AS)	POPTR_0001s02910	sp|Q6LA43|APRR2_ARATH	Two-component response regulator-like APRR2 OS=Arabidopsis thaliana GN=APRR2 PE=2 SV=2	AT4G18020.6	| Symbols: APRR2 | CheY-like two-component responsive regulator family protein | chr4:10003738-10006682 REVERSE LENGTH=535	LOC_Os06g24070.1	protein|myb-like DNA-binding domain containing protein, expressed	IMGA|Medtr5g014040.2	Two-component response regulator-like protein chr5 4383956-4388762 F EGN_Mt100125 20111014	GO:0000160|two-component signal transduction system (phosphorelay) GO:0006355|regulation of transcription, DNA-dependent GO:0007623|circadian rhythm GO:0009736|cytokinin mediated signaling pathway	GO:0000156|two-component response regulator activity GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_00282	A	A1S	Potri.001G146300	Potri.001G146300(AS)	POPTR_0001s02920	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00283	A	A1S	Potri.001G146400	Potri.001G146400(AS)	POPTR_0001s02930	sp|Q94EJ6|PMTE_ARATH	Probable methyltransferase PMT14 OS=Arabidopsis thaliana GN=At4g18030 PE=1 SV=1	AT4G18030.1	| Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr4:10012850-10015267 REVERSE LENGTH=621	LOC_Os09g24900.2	protein|methyltransferase, putative, expressed	IMGA|Medtr5g040360.1	hypothetical protein chr5 17341792-17337231 F EGN_Mt100125 20111014	GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway	GO:0008168|methyltransferase activity	GO:0005768|endosome GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0009505|plant-type cell wall
pt2_00284	A	A1S	Potri.001G146500	Potri.001G146500(AS)	POPTR_0001s02940	NA	NA	AT5G46560.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Inner nuclear membrane protein MAN1 (InterPro:IPR018996); Has 58 Blast hits to 58 proteins in 29 species: Archae - 0; Bacteria - 4; Metazoa - 11; Fungi - 15; Plants - 20; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). | chr5:18888061-18890090 FORWARD LENGTH=387	LOC_Os03g01016.2	protein|expressed protein	IMGA|Medtr5g014010.1	hypothetical protein chr5 4368613-4372258 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005639|integral to nuclear inner membrane GO:0005783|endoplasmic reticulum GO:0009543|chloroplast thylakoid lumen
pt2_00285	A	A1S	Potri.001G146600	Potri.001G146600(AS)	POPTR_0001s02950	sp|Q9AST6|VSP55_ARATH	Vacuolar protein sorting-associated protein 55 homolog OS=Arabidopsis thaliana GN=At1g32410 PE=2 SV=1	AT1G32410.5	| Symbols: | Vacuolar protein sorting 55 (VPS55) family protein | chr1:11694398-11695297 FORWARD LENGTH=140	LOC_Os02g55980.1	protein|vacuolar protein sorting 55 family protein, putative, expressed	IMGA|Medtr5g013980.1	Vacuolar protein sorting-associated protein-like protein chr5 4363901-4361432 F EGN_Mt100125 20111014	GO:0006810|transport	GO:0005215|transporter activity	GO:0005773|vacuole
pt2_00286	A	A1S	Potri.001G146700	Potri.001G146700(AS)	POPTR_0001s02960	NA	NA	AT3G59840.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 72 Blast hits to 72 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:22105853-22106146 REVERSE LENGTH=97	LOC_Os05g42110.1	protein|allyl alcohol dehydrogenase, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009536|plastid GO:0009941|chloroplast envelope
pt2_00287	A	A1S	Potri.001G146800	Potri.001G146800(AS)	POPTR_0001s02970	NA	NA	AT5G45540.1	| Symbols: | Protein of unknown function (DUF594) | chr5:18458294-18460705 REVERSE LENGTH=803	LOC_Os11g42080.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005886|plasma membrane
pt2_00288	A	A1S	Potri.001G146900	Potri.001G146900(AS)	POPTR_0001s02980	sp|P57750|AGM1_ARATH	Phosphoacetylglucosamine mutase OS=Arabidopsis thaliana GN=DRT101 PE=1 SV=1	AT5G18070.1	| Symbols: DRT101 | phosphoglucosamine mutase-related | chr5:5981117-5982787 FORWARD LENGTH=556	LOC_Os07g09720.1	protein|phosphoacetylglucosamine mutase, putative, expressed	IMGA|Medtr5g013970.1	Phosphoacetylglucosamine mutase chr5 4358530-4352887 E EGN_Mt100125 20111014	GO:0000719|photoreactive repair GO:0005975|carbohydrate metabolic process GO:0006048|UDP-N-acetylglucosamine biosynthetic process GO:0009411|response to UV GO:0019255|glucose 1-phosphate metabolic process	GO:0004610|phosphoacetylglucosamine mutase activity GO:0004614|phosphoglucomutase activity GO:0016868|intramolecular transferase activity, phosphotransferases	GO:0005739|mitochondrion GO:0005829|cytosol GO:0009506|plasmodesma GO:0009507|chloroplast
pt2_00289	A	A1S	Potri.001G147000	Potri.001G147000(AS)	POPTR_0001s02990	sp|Q6NWJ4|DNJC2_DANRE	DnaJ homolog subfamily C member 2 OS=Danio rerio GN=dnajc2 PE=2 SV=1	AT5G45420.1	| Symbols: | Duplicated homeodomain-like superfamily protein | chr5:18405668-18406597 REVERSE LENGTH=309	LOC_Os08g06240.1	protein|MYB family transcription factor, putative, expressed	NA	NA	GO:0048767|root hair elongation	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus GO:0005783|endoplasmic reticulum GO:0005886|plasma membrane
pt2_00290	A	A1S	Potri.001G147100	Potri.001G147100(AS)	POPTR_0001s03000	NA	NA	AT1G31870.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2050, pre-mRNA-splicing factor (InterPro:IPR018609); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr1:11437269-11439821 FORWARD LENGTH=561	LOC_Os08g08080.2	protein|BUD13, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005829|cytosol
pt2_00291	A	A1S	Potri.001G147200	Potri.001G147200(AS)	POPTR_0001s03010	sp|Q850K7|EXLB1_ORYSJ	Expansin-like B1 OS=Oryza sativa subsp. japonica GN=EXLB1 PE=2 SV=2	AT4G17030.1	| Symbols: ATEXLB1, EXPR, AT-EXPR, ATEXPR1, ATHEXP BETA 3.1, EXLB1 | expansin-like B1 | chr4:9581817-9583181 REVERSE LENGTH=250	LOC_Os07g31390.1	protein|beta-expansin precursor, putative, expressed	IMGA|Medtr5g013440.1	Expansin-like protein chr5 4008030-4006305 F EGN_Mt100125 20111014	GO:0009826|unidimensional cell growth GO:0009828|plant-type cell wall loosening GO:0019953|sexual reproduction	NA	GO:0005576|extracellular region
pt2_00292	A	A1S	Potri.001G147300	Potri.001G147300(AS)	POPTR_0001s03020	sp|Q9X0Y1|P1254_THEMA	Phosphorylated carbohydrates phosphatase TM_1254 OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=TM_1254 PE=1 SV=1	AT2G38740.1	| Symbols: | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr2:16194639-16195995 REVERSE LENGTH=244	LOC_Os09g24230.1	protein|haloacid dehalogenase-like hydrolase family protein, putative, expressed	IMGA|Medtr5g013910.1	Pyrophosphatase ppaX chr5 4329631-4331624 F EGN_Mt100125 20111014	GO:0008152|metabolic process	GO:0003824|catalytic activity GO:0016787|hydrolase activity	GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane
pt2_00293	A	A1S	Potri.001G147400	Potri.001G147400(AS)	POPTR_0001s03030	sp|Q9X0Y1|P1254_THEMA	Phosphorylated carbohydrates phosphatase TM_1254 OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=TM_1254 PE=1 SV=1	AT2G38740.1	| Symbols: | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr2:16194639-16195995 REVERSE LENGTH=244	LOC_Os10g41930.2	protein|haloacid dehalogenase-like hydrolase family protein, putative, expressed	IMGA|Medtr5g013910.1	Pyrophosphatase ppaX chr5 4329631-4331624 F EGN_Mt100125 20111014	GO:0008152|metabolic process	GO:0003824|catalytic activity GO:0016787|hydrolase activity	GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane
pt2_00294	A	A1S	Potri.001G147500	Potri.001G147500(AS)	POPTR_0001s03040	sp|Q9FNX5|DRP1E_ARATH	Dynamin-related protein 1E OS=Arabidopsis thaliana GN=DRP1E PE=1 SV=1	AT3G60190.1	| Symbols: ADL4, ADLP2, EDR3, DRP1E, ADL1E, DL1E | DYNAMIN-like 1E | chr3:22244367-22247651 REVERSE LENGTH=624	LOC_Os10g41820.1	protein|dynamin family protein, putative, expressed	IMGA|Medtr5g009150.1	Dynamin-related protein 1A chr5 1886432-1881144 H EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0002831|regulation of response to biotic stimulus GO:0006612|protein targeting to membrane GO:0009595|detection of biotic stimulus GO:0009697|salicylic acid biosynthetic process GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0016192|vesicle-mediated transport GO:0031348|negative regulation of defense response GO:0042742|defense response to bacterium GO:0043900|regulation of multi-organism process GO:0046686|response to cadmium ion GO:0050832|defense response to fungus	GO:0003924|GTPase activity GO:0005525|GTP binding	GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_00295	A	A1S	Potri.001G147600	Potri.001G147600(AS)	POPTR_0001s03050	sp|O49726|PUP9_ARATH	Probable purine permease 9 OS=Arabidopsis thaliana GN=PUP9 PE=2 SV=2	AT4G18210.1	| Symbols: ATPUP10, PUP10 | purine permease 10 | chr4:10076175-10077495 FORWARD LENGTH=390	LOC_Os02g46380.2	protein|purine permease, putative, expressed	IMGA|Medtr5g065080.1	Purine permease chr5 26371801-26373742 H EGN_Mt100125 20111014	GO:0006863|purine nucleobase transport GO:0009624|response to nematode GO:0015931|nucleobase-containing compound transport	GO:0005345|purine nucleobase transmembrane transporter activity	GO:0005737|cytoplasm GO:0016020|membrane
pt2_00296	A	A1S	Potri.001G147700	Potri.001G147700(AS)	POPTR_0001s03060	sp|Q9M9S4|Y1143_ARATH	Probable LRR receptor-like serine/threonine-protein kinase At1g14390 OS=Arabidopsis thaliana GN=At1g14390 PE=2 SV=1	AT1G14390.1	| Symbols: | Leucine-rich repeat protein kinase family protein | chr1:4924277-4926794 FORWARD LENGTH=747	LOC_Os07g07230.1	protein|protein kinase, putative, expressed	IMGA|Medtr5g038600.1	LRR receptor-like serine/threonine-protein kinase EFR chr5 16538056-16535057 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_00297	A	A1S	Potri.001G147700	Potri.001G147700(AS)	POPTR_0001s03060	sp|Q9M9S4|Y1143_ARATH	Probable LRR receptor-like serine/threonine-protein kinase At1g14390 OS=Arabidopsis thaliana GN=At1g14390 PE=2 SV=1	AT1G14390.1	| Symbols: | Leucine-rich repeat protein kinase family protein | chr1:4924277-4926794 FORWARD LENGTH=747	LOC_Os07g07230.1	protein|protein kinase, putative, expressed	IMGA|Medtr5g038600.1	LRR receptor-like serine/threonine-protein kinase EFR chr5 16538056-16535057 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_00298	A	A1S	Potri.001G147800	Potri.001G147800(AS)	POPTR_0001s03070	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00299	G	G1	NA	NA	POPTR_0001s03080	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00300	A	A2S	Potri.001G147900	Potri.001G147900(AS) Potri.003G086700(DS)	POPTR_0001s03090	sp|O80501|RAH1B_ARATH	Ras-related protein RABH1b OS=Arabidopsis thaliana GN=RABH1B PE=1 SV=1	AT2G44610.1	| Symbols: RAB6, ATRABH1B, ATRAB6A, RAB6A | Ras-related small GTP-binding family protein | chr2:18411778-18413883 REVERSE LENGTH=208	LOC_Os07g31370.1	protein|ras-related protein, putative, expressed	IMGA|Medtr5g013900.1	Ras-related protein Rab-6 chr5 4324275-4328602 E EGN_Mt100125 20111014	GO:0006891|intra-Golgi vesicle-mediated transport GO:0006944|cellular membrane fusion GO:0007264|small GTPase mediated signal transduction GO:0015031|protein transport GO:0032940|secretion by cell	GO:0005515|protein binding GO:0005525|GTP binding	GO:0000139|Golgi membrane GO:0005768|endosome GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0005829|cytosol GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane
pt2_00301	A	A1S	Potri.001G148000	Potri.001G148000(AS)	POPTR_0001s03100	sp|Q84Y18|CXIP4_ARATH	CAX-interacting protein 4 OS=Arabidopsis thaliana GN=CXIP4 PE=1 SV=2	AT2G28910.1	| Symbols: CXIP4 | CAX interacting protein 4 | chr2:12415992-12416990 REVERSE LENGTH=332	LOC_Os09g01640.1	protein|CAX-interacting protein 4, putative, expressed	IMGA|Medtr1g044570.1	CAX-interacting protein chr1 13154580-13151432 F EGN_Mt100125 20111014	GO:0006816|calcium ion transport GO:0006869|lipid transport GO:0006891|intra-Golgi vesicle-mediated transport GO:0010043|response to zinc ion GO:0010351|lithium ion transport GO:0016558|protein import into peroxisome matrix GO:0048573|photoperiodism, flowering GO:0051928|positive regulation of calcium ion transport	GO:0003676|nucleic acid binding GO:0008270|zinc ion binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_00302	A	A1S	Potri.001G148100	Potri.001G148100(AS)	POPTR_0001s03110	sp|Q9FJR0|RENT1_ARATH	Regulator of nonsense transcripts 1 homolog OS=Arabidopsis thaliana GN=UPF1 PE=1 SV=2	AT5G47010.1	| Symbols: UPF1, LBA1, ATUPF1 | RNA helicase, putative | chr5:19072009-19078856 FORWARD LENGTH=1254	LOC_Os07g31340.1	protein|regulator of nonsense transcripts 1, putative, expressed	IMGA|Medtr5g013820.1	Regulator of nonsense transcripts-like protein chr5 4291220-4278449 E EGN_Mt100125 20111014	GO:0000184|nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:0009744|response to sucrose stimulus GO:0009755|hormone-mediated signaling pathway GO:0010182|sugar mediated signaling pathway GO:0016246|RNA interference GO:0048585|negative regulation of response to stimulus GO:0048825|cotyledon development	GO:0003677|DNA binding GO:0003724|RNA helicase activity GO:0004386|helicase activity GO:0005524|ATP binding GO:0008270|zinc ion binding GO:0016787|hydrolase activity	GO:0000932|cytoplasmic mRNA processing body GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_00303	B	B1S	Potri.001G148200	Potri.001G148200(BS)	POPTR_0001s03120	NA	NA	NA	NA	LOC_Os04g55250.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_00304	C	C1S	Potri.001G148300	Potri.001G148300(CS)	NA	NA	AT5G47020.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G11700.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:19082005-19089800 FORWARD LENGTH=1421	LOC_Os04g10380.1	protein|glycine-rich protein, putative, expressed	IMGA|Medtr5g013800.1	hypothetical protein chr5 4269926-4257143 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_00305	B	B2S	Potri.001G148300	Potri.001G148300(BS) Potri.003G086200(DS)	POPTR_0001s03140	NA	NA	AT5G47020.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G11700.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:19082005-19089800 FORWARD LENGTH=1421	LOC_Os04g10380.1	protein|glycine-rich protein, putative, expressed	IMGA|Medtr5g013800.1	hypothetical protein chr5 4269926-4257143 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_00306	A	A1S	Potri.001G148400	Potri.001G148400(AS)	POPTR_0001s03160	sp|O04979|LONP2_SPIOL	Lon protease homolog 2, peroxisomal OS=Spinacia oleracea PE=2 SV=2	AT5G47040.1	| Symbols: LON2 | lon protease 2 | chr5:19093356-19098678 REVERSE LENGTH=888	LOC_Os09g36300.1	protein|OsLonP4 - Putative Lon protease homologue, expressed	IMGA|Medtr5g013790.1	Lon protease-like protein chr5 4244709-4253659 F EGN_Mt100125 20111014	GO:0006200|ATP catabolic process GO:0006508|proteolysis GO:0006515|misfolded or incompletely synthesized protein catabolic process GO:0016485|protein processing GO:0016560|protein import into peroxisome matrix, docking GO:0038032|termination of G-protein coupled receptor signaling pathway GO:0040007|growth GO:0048527|lateral root development	GO:0000166|nucleotide binding GO:0004176|ATP-dependent peptidase activity GO:0004252|serine-type endopeptidase activity GO:0005524|ATP binding GO:0008236|serine-type peptidase activity GO:0017111|nucleoside-triphosphatase activity GO:0043565|sequence-specific DNA binding	GO:0005777|peroxisome GO:0005782|peroxisomal matrix GO:0009295|nucleoid GO:0043233|organelle lumen
pt2_00307	A	A1S	Potri.001G148500	Potri.001G148500(AS)	POPTR_0001s03180	NA	NA	AT1G32730.1	| Symbols: | unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF702 (InterPro:IPR007818); Has 120 Blast hits to 118 proteins in 39 species: Archae - 0; Bacteria - 8; Metazoa - 63; Fungi - 4; Plants - 33; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). | chr1:11841077-11842956 FORWARD LENGTH=327	LOC_Os08g03550.1	protein|expressed protein	NA	NA	GO:0016571|histone methylation GO:0048451|petal formation GO:0048453|sepal formation	NA	GO:0009507|chloroplast
pt2_00308	A	A5S	Potri.001G040500	Potri.001G040500(AS) Potri.T132900(DS) Potri.001G039200(DS) Potri.001G040800(DS) Potri.001G038300(DS)	POPTR_0001s03190	sp|Q9SA25|WAKLG_ARATH	Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1	AT1G16260.2	| Symbols: | Wall-associated kinase family protein | chr1:5559708-5562018 REVERSE LENGTH=720	LOC_Os02g02120.1	protein|OsWAK11 - OsWAK receptor-like protein kinase, expressed	IMGA|Medtr5g033690.1	Cysteine-rich receptor-like protein kinase chr5 14100663-14103784 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0010200|response to chitin GO:0046777|protein autophosphorylation GO:0050832|defense response to fungus	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005509|calcium ion binding GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0016021|integral to membrane
pt2_00309	A	A8S	Potri.T132900	Potri.T132900(AS) Potri.T132800(AS) Potri.T166600(BS) Potri.001G040500(BS) Potri.001G039200(BS) Potri.001G040800(BS) Potri.001G038300(BS) Potri.001G039900(DS)	POPTR_0001s03210	sp|Q9SA25|WAKLG_ARATH	Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1	AT1G16260.2	| Symbols: | Wall-associated kinase family protein | chr1:5559708-5562018 REVERSE LENGTH=720	LOC_Os04g55760.1	protein|OsWAK55 - OsWAK receptor-like protein kinase, expressed	IMGA|Medtr5g018570.1	Kinase-like protein chr5 6674294-6679204 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0010200|response to chitin GO:0046777|protein autophosphorylation GO:0050832|defense response to fungus	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005509|calcium ion binding GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0016021|integral to membrane
pt2_00310	G	G1	NA	NA	POPTR_0001s03220	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00311	G	G1	NA	NA	POPTR_0001s03225	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00312	A	A7S	Potri.T132900	Potri.T132900(AS) Potri.T132800(AS) Potri.T166600(BS) Potri.001G038300(BS) Potri.001G039900(BS) Potri.001G039200(DS) Potri.001G040800(DS)	POPTR_0001s03230	sp|Q9SA25|WAKLG_ARATH	Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1	AT1G16260.2	| Symbols: | Wall-associated kinase family protein | chr1:5559708-5562018 REVERSE LENGTH=720	LOC_Os04g55760.1	protein|OsWAK55 - OsWAK receptor-like protein kinase, expressed	IMGA|Medtr5g018570.1	Kinase-like protein chr5 6674294-6679204 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0010200|response to chitin GO:0046777|protein autophosphorylation GO:0050832|defense response to fungus	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005509|calcium ion binding GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0016021|integral to membrane
pt2_00313	A	A1S	Potri.001G040000	Potri.001G040000(AS)	POPTR_0001s03240	sp|Q8RY17|WAKLI_ARATH	Wall-associated receptor kinase-like 22 OS=Arabidopsis thaliana GN=WAKL22 PE=2 SV=1	AT1G79670.1	| Symbols: RFO1, WAKL22 | Wall-associated kinase family protein | chr1:29976887-29979337 REVERSE LENGTH=751	LOC_Os04g55760.1	protein|OsWAK55 - OsWAK receptor-like protein kinase, expressed	IMGA|Medtr5g018570.1	Kinase-like protein chr5 6674294-6679204 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005509|calcium ion binding GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005576|extracellular region GO:0016021|integral to membrane
pt2_00314	B	B1S	Potri.001G040100	Potri.001G040100(BS)	POPTR_0001s03250	NA	NA	AT1G16080.1	| Symbols: | unknown protein; LOCATED IN: apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 81 Blast hits to 81 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). | chr1:5514394-5515761 FORWARD LENGTH=313	LOC_Os08g16570.1	protein|expressed protein	NA	NA	GO:0006098|pentose-phosphate shunt GO:0009965|leaf morphogenesis GO:0010027|thylakoid membrane organization GO:0016117|carotenoid biosynthetic process GO:0030154|cell differentiation	NA	GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope GO:0048046|apoplast
pt2_00315	A	A4S	Potri.T132500	Potri.T132500(AS) Potri.001G040200(AS) Potri.001G041300(BS) Potri.019G100000(DS)	POPTR_0001s03260	sp|P43390|MT2_ACTDE	Metallothionein-like protein type 2 OS=Actinidia deliciosa GN=pKIWI504 PE=2 SV=1	NA	NA	NA	NA	NA	NA	GO:0006878|cellular copper ion homeostasis	GO:0005507|copper ion binding GO:0046872|metal ion binding	NA
pt2_00316	C	C1S	Potri.001G041400	Potri.001G041400(CS)	sp|Q9S9M8|TLP8_ARATH	Tubby-like protein 8 OS=Arabidopsis thaliana GN=TULP8 PE=2 SV=1	AT1G16070.1	| Symbols: AtTLP8, TLP8 | tubby like protein 8 | chr1:5511899-5513779 REVERSE LENGTH=397	LOC_Os02g08310.1	protein|tubby, putative, expressed	IMGA|contig_17208_1.1	Tubby-like F-box protein contig_17208 351-1023 E PREDN 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009620|response to fungus GO:0048443|stamen development	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus GO:0005829|cytosol
pt2_00317	A	A1S	Potri.001G041400	Potri.001G041400(AS)	POPTR_0001s03290	sp|Q9S9M8|TLP8_ARATH	Tubby-like protein 8 OS=Arabidopsis thaliana GN=TULP8 PE=2 SV=1	AT1G16070.1	| Symbols: AtTLP8, TLP8 | tubby like protein 8 | chr1:5511899-5513779 REVERSE LENGTH=397	LOC_Os02g08310.1	protein|tubby, putative, expressed	IMGA|contig_17208_1.1	Tubby-like F-box protein contig_17208 351-1023 E PREDN 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009620|response to fungus GO:0048443|stamen development	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus GO:0005829|cytosol
pt2_00318	A	A1S	Potri.001G041500	Potri.001G041500(AS)	POPTR_0001s03300	sp|Q94AN4|AP2L1_ARATH	AP2-like ethylene-responsive transcription factor At1g16060 OS=Arabidopsis thaliana GN=At1g16060 PE=2 SV=1	AT1G16060.1	| Symbols: ADAP | ARIA-interacting double AP2 domain protein | chr1:5508563-5511609 FORWARD LENGTH=345	LOC_Os06g05340.1	protein|AP2 domain containing protein, expressed	IMGA|Medtr5g031880.1	AP2-like ethylene-responsive transcription factor BBM chr5 13258840-13254528 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009414|response to water deprivation GO:0009651|response to salt stress GO:0009737|response to abscisic acid stimulus GO:0009887|organ morphogenesis GO:0010187|negative regulation of seed germination GO:0040008|regulation of growth	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00319	B	B1S	Potri.001G041600	Potri.001G041600(BS)	POPTR_0001s03310	NA	NA	AT1G79710.1	| Symbols: | Major facilitator superfamily protein | chr1:29995137-29996988 FORWARD LENGTH=497	LOC_Os06g08750.1	protein|integral membrane transporter family protein, putative, expressed	IMGA|Medtr1g014250.1	hypothetical protein chr1 3730042-3725308 E EGN_Mt100125 20111014	GO:0006810|transport	GO:0005215|transporter activity	GO:0005634|nucleus GO:0016020|membrane
pt2_00320	A	A1S	Potri.001G041700	Potri.001G041700(AS)	POPTR_0001s03320	sp|Q9LS40|ASPG1_ARATH	Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1	AT1G79720.1	| Symbols: | Eukaryotic aspartyl protease family protein | chr1:29997259-29998951 REVERSE LENGTH=484	LOC_Os09g25570.1	protein|aspartic proteinase, putative, expressed	IMGA|contig_51649_1.1	Aspartic proteinase nepenthesin-1 contig_51649 769-2767 E PREDN 20111014	GO:0006508|proteolysis	GO:0004190|aspartic-type endopeptidase activity	GO:0005576|extracellular region GO:0048046|apoplast
pt2_00321	A	A1S	Potri.001G041800	Potri.001G041800(AS)	POPTR_0001s03330	NA	NA	AT2G24100.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G30780.1); Has 101 Blast hits to 101 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). | chr2:10244921-10246715 FORWARD LENGTH=466	LOC_Os06g08740.1	protein|expressed protein	IMGA|Medtr1g084010.1	hypothetical protein chr1 21959221-21957297 H EGN_Mt100125 20111014	NA	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00322	A	A1S	Potri.001G041900	Potri.001G041900(AS)	POPTR_0001s03340	NA	NA	AT1G80940.1	| Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr1:30410959-30411943 FORWARD LENGTH=213	LOC_Os02g55080.1	protein|snf1-related kinase interactor 2, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00323	A	A1S	Potri.001G042000	Potri.001G042000(AS)	POPTR_0001s03350	NA	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_00324	A	A1S	Potri.001G042100	Potri.001G042100(AS)	POPTR_0001s03360	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00325	A	A1S	Potri.001G042200	Potri.001G042200(AS)	POPTR_0001s03370	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00326	A	A1S	Potri.001G042300	Potri.001G042300(AS)	POPTR_0001s03380	NA	NA	AT1G63700.1	| Symbols: EMB71, YDA, MAPKKK4 | Protein kinase superfamily protein | chr1:23625208-23629031 REVERSE LENGTH=883	LOC_Os02g44642.1	protein|STE_MEKK_ste11_MAP3K.10 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	IMGA|Medtr5g017110.1	Protein kinase-like protein chr5 5965464-5964403 H EGN_Mt100125 20111014	GO:0000302|response to reactive oxygen species GO:0006468|protein phosphorylation GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009651|response to salt stress GO:0048235|pollen sperm cell differentiation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005515|protein binding GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	NA
pt2_00327	A	A1S	Potri.001G042400	Potri.001G042400(AS)	POPTR_0001s03390	sp|Q9FZ36|M3K2_ARATH	Mitogen-activated protein kinase kinase kinase 2 OS=Arabidopsis thaliana GN=ANP2 PE=2 SV=1	AT3G50310.1	| Symbols: MAPKKK20 | mitogen-activated protein kinase kinase kinase 20 | chr3:18648296-18649324 REVERSE LENGTH=342	LOC_Os02g21700.1	protein|STE_MEKK_ste11_MAP3K.8 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	IMGA|Medtr5g017140.1	Mitogen-activated protein kinase kinase kinase A chr5 5976237-5975296 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0009414|response to water deprivation GO:0009723|response to ethylene stimulus GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0035556|intracellular signal transduction GO:0042538|hyperosmotic salinity response	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_00328	A	A2S	Potri.001G042500	Potri.001G042500(AS) Potri.003G184100(DS)	POPTR_0001s03400	sp|Q9ZUI0|Y2241_ARATH	Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130 OS=Arabidopsis thaliana GN=At2g24130 PE=2 SV=1	AT2G24130.1	| Symbols: | Leucine-rich receptor-like protein kinase family protein | chr2:10258148-10261220 FORWARD LENGTH=980	LOC_Os09g25540.1	protein|receptor-like protein kinase 2 precursor, putative, expressed	IMGA|Medtr5g026150.1	Receptor kinase-like protein chr5 10486068-10481801 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_00329	A	A1S	Potri.001G042600	Potri.001G042600(AS)	POPTR_0001s03410	sp|P09189|HSP7C_PETHY	Heat shock cognate 70 kDa protein OS=Petunia hybrida GN=HSP70 PE=2 SV=1	AT3G12580.1	| Symbols: HSP70, ATHSP70 | heat shock protein 70 | chr3:3991487-3993689 REVERSE LENGTH=650	LOC_Os05g38530.1	protein|DnaK family protein, putative, expressed	IMGA|Medtr5g066800.1	Heat shock protein chr5 27240729-27238467 H EGN_Mt100125 20111014	GO:0006457|protein folding GO:0009266|response to temperature stimulus GO:0009408|response to heat GO:0009615|response to virus GO:0009617|response to bacterium GO:0009644|response to high light intensity GO:0016567|protein ubiquitination GO:0034976|response to endoplasmic reticulum stress GO:0042542|response to hydrogen peroxide GO:0046686|response to cadmium ion	GO:0005524|ATP binding GO:0031625|ubiquitin protein ligase binding	GO:0005618|cell wall GO:0005739|mitochondrion GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0005829|cytosol GO:0005886|plasma membrane GO:0048046|apoplast
pt2_00330	A	A1S	Potri.001G042700	Potri.001G042700(AS)	POPTR_0001s03420	sp|P26413|HSP70_SOYBN	Heat shock 70 kDa protein OS=Glycine max GN=HSP70 PE=3 SV=1	AT3G12580.1	| Symbols: HSP70, ATHSP70 | heat shock protein 70 | chr3:3991487-3993689 REVERSE LENGTH=650	LOC_Os05g38530.1	protein|DnaK family protein, putative, expressed	IMGA|Medtr5g066800.1	Heat shock protein chr5 27240729-27238467 H EGN_Mt100125 20111014	GO:0006457|protein folding GO:0009408|response to heat GO:0009615|response to virus GO:0009644|response to high light intensity GO:0010286|heat acclimation GO:0034976|response to endoplasmic reticulum stress GO:0042542|response to hydrogen peroxide	GO:0005524|ATP binding	GO:0005618|cell wall GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane GO:0009507|chloroplast GO:0016020|membrane
pt2_00331	B	B2A	Potri.001G042900	Potri.001G042900(BA) Potri.001G042800(DS)	POPTR_0001s03430	sp|Q8GSM7|HCT_TOBAC	Hydroxycinnamoyl-Coenzyme A shikimate/quinate hydroxycinnamoyltransferase OS=Nicotiana tabacum GN=HCT PE=1 SV=1	AT5G48930.1	| Symbols: HCT | hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase | chr5:19836654-19838092 REVERSE LENGTH=433	LOC_Os02g39850.1	protein|transferase family protein, putative, expressed	IMGA|Medtr5g076700.1	Benzoyl coenzyme A benzyl alcohol benzoyl transferase chr5 31729976-31732699 H EGN_Mt100125 20111014	GO:0006612|protein targeting to membrane GO:0009611|response to wounding GO:0009805|coumarin biosynthetic process GO:0009809|lignin biosynthetic process GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010252|auxin homeostasis GO:0010363|regulation of plant-type hypersensitive response	GO:0016740|transferase activity GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups GO:0047172|shikimate O-hydroxycinnamoyltransferase activity GO:0047205|quinate O-hydroxycinnamoyltransferase activity	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_00332	A	A1S	Potri.001G042900	Potri.001G042900(AS)	POPTR_0001s03440	sp|Q8GSM7|HCT_TOBAC	Hydroxycinnamoyl-Coenzyme A shikimate/quinate hydroxycinnamoyltransferase OS=Nicotiana tabacum GN=HCT PE=1 SV=1	AT5G48930.1	| Symbols: HCT | hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase | chr5:19836654-19838092 REVERSE LENGTH=433	LOC_Os02g39850.1	protein|transferase family protein, putative, expressed	IMGA|Medtr5g076700.1	Benzoyl coenzyme A benzyl alcohol benzoyl transferase chr5 31729976-31732699 H EGN_Mt100125 20111014	GO:0006612|protein targeting to membrane GO:0009611|response to wounding GO:0009805|coumarin biosynthetic process GO:0009809|lignin biosynthetic process GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010252|auxin homeostasis GO:0010363|regulation of plant-type hypersensitive response	GO:0016740|transferase activity GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups GO:0047172|shikimate O-hydroxycinnamoyltransferase activity GO:0047205|quinate O-hydroxycinnamoyltransferase activity	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_00333	G	G1	NA	NA	POPTR_0001s03450	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00334	A	A1S	Potri.001G043000	Potri.001G043000(AS)	POPTR_0001s03460	sp|Q9SZ53|P2C60_ARATH	Probable protein phosphatase 2C 60 OS=Arabidopsis thaliana GN=At4g31860 PE=2 SV=1	AT4G31860.1	| Symbols: | Protein phosphatase 2C family protein | chr4:15406685-15408589 REVERSE LENGTH=357	LOC_Os06g44210.1	protein|protein phosphatase 2C, putative, expressed	IMGA|Medtr1g014190.2	Protein phosphatase chr1 3701434-3696890 F EGN_Mt100125 20111014	GO:0006470|protein dephosphorylation GO:0006499|N-terminal protein myristoylation GO:0009610|response to symbiotic fungus GO:0016036|cellular response to phosphate starvation GO:0019375|galactolipid biosynthetic process GO:0042631|cellular response to water deprivation	GO:0003824|catalytic activity GO:0004722|protein serine/threonine phosphatase activity	GO:0005634|nucleus GO:0005886|plasma membrane GO:0008287|protein serine/threonine phosphatase complex
pt2_00335	A	A1S	Potri.001G043100	Potri.001G043100(AS)	POPTR_0001s03470	sp|Q9SAG8|DNAJ8_ARATH	Chaperone protein dnaJ 8, chloroplastic OS=Arabidopsis thaliana GN=ATJ8 PE=2 SV=1	AT1G80920.1	| Symbols: J8 | Chaperone DnaJ-domain superfamily protein | chr1:30403863-30404549 REVERSE LENGTH=163	LOC_Os06g44160.1	protein|heat shock protein DnaJ, putative, expressed	NA	NA	GO:0006457|protein folding GO:0006950|response to stress GO:0009416|response to light stimulus	GO:0031072|heat shock protein binding GO:0051082|unfolded protein binding	GO:0005634|nucleus GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_00336	A	A1S	Potri.001G043200	Potri.001G043200(AS)	POPTR_0001s03480	sp|Q9S9N4|MRS21_ARATH	Magnesium transporter MRS2-1 OS=Arabidopsis thaliana GN=MRS2-1 PE=2 SV=1	AT1G16010.3	| Symbols: MGT2 | magnesium transporter 2 | chr1:5495462-5497082 REVERSE LENGTH=442	LOC_Os06g44150.1	protein|CorA-like magnesium transporter protein, putative, expressed	IMGA|Medtr5g045590.1	Magnesium transporter chr5 19583832-19586313 E EGN_Mt100125 20111014	GO:0030001|metal ion transport GO:0055085|transmembrane transport	GO:0015095|magnesium ion transmembrane transporter activity GO:0046873|metal ion transmembrane transporter activity	GO:0005773|vacuole GO:0005886|plasma membrane GO:0016020|membrane
pt2_00337	A	A1S	Potri.001G043200	Potri.001G043200(AS)	POPTR_0001s03480	sp|Q9S9N4|MRS21_ARATH	Magnesium transporter MRS2-1 OS=Arabidopsis thaliana GN=MRS2-1 PE=2 SV=1	AT1G16010.3	| Symbols: MGT2 | magnesium transporter 2 | chr1:5495462-5497082 REVERSE LENGTH=442	LOC_Os06g44150.1	protein|CorA-like magnesium transporter protein, putative, expressed	IMGA|Medtr5g045590.1	Magnesium transporter chr5 19583832-19586313 E EGN_Mt100125 20111014	GO:0030001|metal ion transport GO:0055085|transmembrane transport	GO:0015095|magnesium ion transmembrane transporter activity GO:0046873|metal ion transmembrane transporter activity	GO:0005773|vacuole GO:0005886|plasma membrane GO:0016020|membrane
pt2_00338	C	C1S	Potri.001G043200	Potri.001G043200(CS)	sp|Q9S9N4|MRS21_ARATH	Magnesium transporter MRS2-1 OS=Arabidopsis thaliana GN=MRS2-1 PE=2 SV=1	AT1G16010.3	| Symbols: MGT2 | magnesium transporter 2 | chr1:5495462-5497082 REVERSE LENGTH=442	LOC_Os06g44150.1	protein|CorA-like magnesium transporter protein, putative, expressed	IMGA|Medtr5g045590.1	Magnesium transporter chr5 19583832-19586313 E EGN_Mt100125 20111014	GO:0030001|metal ion transport GO:0055085|transmembrane transport	GO:0015095|magnesium ion transmembrane transporter activity GO:0046873|metal ion transmembrane transporter activity	GO:0005773|vacuole GO:0005886|plasma membrane GO:0016020|membrane
pt2_00339	R	R	NA	NA	POPTR_0001s03490	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00340	A	A2S	Potri.001G043400	Potri.001G043400(AS) Potri.003G183400(BS)	POPTR_0001s03500	sp|F1SRI0|TPPC2_PIG	Trafficking protein particle complex subunit 2 OS=Sus scrofa GN=TRAPPC2 PE=2 SV=2	AT1G80500.1	| Symbols: | SNARE-like superfamily protein | chr1:30271195-30272431 FORWARD LENGTH=135	LOC_Os02g40000.1	protein|trafficking protein particle complex subunit, putative, expressed	NA	NA	GO:0006810|transport GO:0006888|ER to Golgi vesicle-mediated transport	GO:0003674|molecular_function	GO:0005622|intracellular GO:0005737|cytoplasm
pt2_00341	B	B1S	Potri.001G043500	Potri.001G043500(BS)	POPTR_0001s03510	sp|Q9SAH2|PP137_ARATH	Pentatricopeptide repeat-containing protein At1g80880, mitochondrial OS=Arabidopsis thaliana GN=At1g80880 PE=2 SV=1	AT1G80880.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:30395194-30396921 REVERSE LENGTH=540	LOC_Os08g17080.1	protein|PPR repeat domain containing protein, putative, expressed	IMGA|Medtr5g006640.1	Pentatricopeptide repeat-containing protein chr5 779349-781747 H EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005739|mitochondrion
pt2_00342	A	A1S	Potri.001G043600	Potri.001G043600(AS)	POPTR_0001s03520	sp|Q39131|LAML_ARATH	Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=1	AT5G15350.1	| Symbols: ENODL17, AtENODL17 | early nodulin-like protein 17 | chr5:4985184-4986154 REVERSE LENGTH=172	LOC_Os09g38540.1	protein|plastocyanin-like domain containing protein, putative, expressed	IMGA|Medtr5g088000.1	Early nodulin-like protein chr5 37151788-37147251 I EGN_Mt100125 20111014	GO:0006084|acetyl-CoA metabolic process GO:0016126|sterol biosynthetic process GO:0016132|brassinosteroid biosynthetic process GO:0052541|plant-type cell wall cellulose metabolic process GO:0052546|cell wall pectin metabolic process	GO:0005507|copper ion binding GO:0009055|electron carrier activity	GO:0005773|vacuole GO:0005886|plasma membrane GO:0031225|anchored to membrane GO:0046658|anchored to plasma membrane
pt2_00343	A	A1S	Potri.001G043700	Potri.001G043700(AS)	POPTR_0001s03530	sp|Q9SAH3|Y1887_ARATH	Putative receptor-like protein kinase At1g80870 OS=Arabidopsis thaliana GN=At1g80870 PE=2 SV=1	AT1G80870.1	| Symbols: | Protein kinase superfamily protein | chr1:30392133-30394211 FORWARD LENGTH=692	LOC_Os03g14710.1	protein|protein kinase, putative, expressed	IMGA|Medtr1g025070.1	Cysteine-rich receptor-like protein kinase chr1 8092872-8088742 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_00344	C	C1S	Potri.001G043800	Potri.001G043800(CS)	sp|Q9C9H7|RLP12_ARATH	Receptor-like protein 12 OS=Arabidopsis thaliana GN=RLP12 PE=2 SV=2	AT2G34930.1	| Symbols: | disease resistance family protein / LRR family protein | chr2:14737169-14739886 REVERSE LENGTH=905	LOC_Os02g17400.1	protein|leucine rich repeat protein, putative, expressed	IMGA|Medtr5g069580.1	Receptor protein kinase-like protein chr5 28520745-28517219 H EGN_Mt100125 20111014	GO:0006952|defense response GO:0007165|signal transduction GO:0050832|defense response to fungus	NA	GO:0005618|cell wall
pt2_00345	A	A2S	Potri.001G043900	Potri.001G043900(AS) Potri.003G183000(DS)	POPTR_0001s03550	sp|Q9FXH6|CNGC8_ARATH	Putative cyclic nucleotide-gated ion channel 8 OS=Arabidopsis thaliana GN=CNGC8 PE=2 SV=2	AT1G19780.1	| Symbols: ATCNGC8, CNGC8 | cyclic nucleotide gated channel 8 | chr1:6833885-6836578 REVERSE LENGTH=753	LOC_Os03g44440.1	protein|cyclic nucleotide-gated ion channel, putative, expressed	IMGA|Medtr1g064240.1	CNGC5-like protein chr1 16479213-16483284 H EGN_Mt100125 20111014	GO:0006811|ion transport GO:0009827|plant-type cell wall modification GO:0009860|pollen tube growth GO:0048610|cellular process involved in reproduction GO:0048868|pollen tube development GO:0055085|transmembrane transport	GO:0005216|ion channel activity GO:0005516|calmodulin binding GO:0030551|cyclic nucleotide binding	GO:0005886|plasma membrane GO:0016020|membrane
pt2_00346	A	A1S	Potri.001G044000	Potri.001G044000(AS)	POPTR_0001s03560	NA	NA	AT1G73060.1	| Symbols: LPA3 | Low PSII Accumulation 3 | chr1:27479027-27481258 FORWARD LENGTH=358	LOC_Os02g02520.1	protein|expressed protein	NA	NA	GO:0009073|aromatic amino acid family biosynthetic process GO:0010207|photosystem II assembly GO:0016226|iron-sulfur cluster assembly	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009571|proplastid stroma
pt2_00347	A	A1S	Potri.001G044000	Potri.001G044000(AS)	POPTR_0001s03560	NA	NA	AT1G73060.1	| Symbols: LPA3 | Low PSII Accumulation 3 | chr1:27479027-27481258 FORWARD LENGTH=358	LOC_Os02g02520.1	protein|expressed protein	NA	NA	GO:0009073|aromatic amino acid family biosynthetic process GO:0010207|photosystem II assembly GO:0016226|iron-sulfur cluster assembly	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009571|proplastid stroma
pt2_00348	A	A1S	Potri.001G044000	Potri.001G044000(AS)	POPTR_0001s03560	NA	NA	AT1G73060.1	| Symbols: LPA3 | Low PSII Accumulation 3 | chr1:27479027-27481258 FORWARD LENGTH=358	LOC_Os02g02520.1	protein|expressed protein	NA	NA	GO:0009073|aromatic amino acid family biosynthetic process GO:0010207|photosystem II assembly GO:0016226|iron-sulfur cluster assembly	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009571|proplastid stroma
pt2_00349	A	A1S	Potri.001G044000	Potri.001G044000(AS)	POPTR_0001s03560	NA	NA	AT1G73060.1	| Symbols: LPA3 | Low PSII Accumulation 3 | chr1:27479027-27481258 FORWARD LENGTH=358	LOC_Os02g02520.1	protein|expressed protein	NA	NA	GO:0009073|aromatic amino acid family biosynthetic process GO:0010207|photosystem II assembly GO:0016226|iron-sulfur cluster assembly	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009571|proplastid stroma
pt2_00350	A	A1S	Potri.001G044100	Potri.001G044100(AS)	POPTR_0001s03570	NA	NA	AT4G37580.1	| Symbols: HLS1, COP3, UNS2 | Acyl-CoA N-acyltransferases (NAT) superfamily protein | chr4:17658932-17660564 FORWARD LENGTH=403	LOC_Os03g55530.1	protein|HLS, putative, expressed	IMGA|Medtr5g015810.1	hypothetical protein chr5 5289463-5287969 H EGN_Mt100125 20111014	GO:0008152|metabolic process GO:0009640|photomorphogenesis GO:0009723|response to ethylene stimulus GO:0009734|auxin mediated signaling pathway GO:0009826|unidimensional cell growth	GO:0008080|N-acetyltransferase activity	GO:0005575|cellular_component
pt2_00351	A	A1S	Potri.001G044200	Potri.001G044200(AS)	POPTR_0001s03580	NA	NA	AT1G80860.1	| Symbols: ATPLMT, PLMT | phospholipid N-methyltransferase | chr1:30388432-30389284 REVERSE LENGTH=164	LOC_Os02g39880.1	protein|expressed protein	NA	NA	GO:0008654|phospholipid biosynthetic process	GO:0000773|phosphatidyl-N-methylethanolamine N-methyltransferase activity GO:0080101|phosphatidyl-N-dimethylethanolamine N-methyltransferase activity	GO:0009507|chloroplast GO:0043231|intracellular membrane-bounded organelle
pt2_00352	A	A1S	Potri.001G044200	Potri.001G044200(AS)	POPTR_0001s03590	NA	NA	AT1G80860.1	| Symbols: ATPLMT, PLMT | phospholipid N-methyltransferase | chr1:30388432-30389284 REVERSE LENGTH=164	LOC_Os02g39880.1	protein|expressed protein	NA	NA	GO:0008654|phospholipid biosynthetic process	GO:0000773|phosphatidyl-N-methylethanolamine N-methyltransferase activity GO:0080101|phosphatidyl-N-dimethylethanolamine N-methyltransferase activity	GO:0009507|chloroplast GO:0043231|intracellular membrane-bounded organelle
pt2_00353	A	A1S	Potri.001G044300	Potri.001G044300(AS)	POPTR_0001s03600	NA	NA	AT1G15980.1	| Symbols: NDF1, NDH48 | NDH-dependent cyclic electron flow 1 | chr1:5489314-5491199 FORWARD LENGTH=461	LOC_Os08g17390.1	protein|expressed protein	NA	NA	GO:0006098|pentose-phosphate shunt GO:0009773|photosynthetic electron transport in photosystem I GO:0010207|photosystem II assembly GO:0015979|photosynthesis GO:0016117|carotenoid biosynthetic process	NA	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0010598|NAD(P)H dehydrogenase complex (plastoquinone)
pt2_00354	C	C1S	Potri.001G044400	Potri.001G044400(CS)	sp|Q7VG78|GUAA_HELHP	Probable GMP synthase [glutamine-hydrolyzing] OS=Helicobacter hepaticus (strain ATCC 51449 / 3B1) GN=guaA PE=3 SV=1	AT1G15970.1	| Symbols: | DNA glycosylase superfamily protein | chr1:5486544-5488494 REVERSE LENGTH=352	LOC_Os06g44050.1	protein|methyladenine glycosylase, putative, expressed	IMGA|contig_87360_1.1	DNA-3-methyladenine glycosylase I contig_87360 1893-326 F PREDN 20111014	GO:0006281|DNA repair GO:0006284|base-excision repair	GO:0003824|catalytic activity GO:0008725|DNA-3-methyladenine glycosylase activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00355	A	A1S	Potri.001G044500	Potri.001G044500(AS)	POPTR_0001s03620	sp|Q9SAH7|WRK40_ARATH	Probable WRKY transcription factor 40 OS=Arabidopsis thaliana GN=WRKY40 PE=1 SV=1	AT1G80840.1	| Symbols: WRKY40, ATWRKY40 | WRKY DNA-binding protein 40 | chr1:30383834-30385356 FORWARD LENGTH=302	LOC_Os09g25060.1	protein|WRKY76, expressed	IMGA|Medtr1g086790.1	WRKY transcription factor chr1 23203731-23201879 F EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0002237|response to molecule of bacterial origin GO:0002679|respiratory burst involved in defense response GO:0002831|regulation of response to biotic stimulus GO:0006355|regulation of transcription, DNA-dependent GO:0006612|protein targeting to membrane GO:0006944|cellular membrane fusion GO:0009595|detection of biotic stimulus GO:0009611|response to wounding GO:0009612|response to mechanical stimulus GO:0009620|response to fungus GO:0009646|response to absence of light GO:0009695|jasmonic acid biosynthetic process GO:0009697|salicylic acid biosynthetic process GO:0009723|response to ethylene stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009751|response to salicylic acid stimulus GO:0009753|response to jasmonic acid stimulus GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009873|ethylene mediated signaling pathway GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0016045|detection of bacterium GO:0030968|endoplasmic reticulum unfolded protein response GO:0031347|regulation of defense response GO:0031348|negative regulation of defense response GO:0035556|intracellular signal transduction GO:0042742|defense response to bacterium GO:0043069|negative regulation of programmed cell death GO:0043900|regulation of multi-organism process GO:0050691|regulation of defense response to virus by host GO:0050776|regulation of immune response GO:0050832|defense response to fungus	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_00356	B	B1S	Potri.001G044600	Potri.001G044600(BS)	POPTR_0001s03630	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00357	A	A1S	Potri.001G044700	Potri.001G044700(AS)	POPTR_0001s03640	sp|Q9AKH1|FER2_RICRI	2Fe-2S ferredoxin OS=Rickettsia rickettsii GN=fdxB PE=3 SV=1	AT4G21090.3	| Symbols: ATMFDX2, MFDX2 | MITOCHONDRIAL FERREDOXIN 2 | chr4:11256663-11258269 REVERSE LENGTH=197	LOC_Os07g01930.1	protein|2Fe-2S iron-sulfur cluster binding domain containing protein, expressed	NA	NA	GO:0019243|methylglyoxal catabolic process to D-lactate	GO:0009055|electron carrier activity GO:0051536|iron-sulfur cluster binding GO:0051537|2 iron, 2 sulfur cluster binding	GO:0005739|mitochondrion
pt2_00358	A	A1S	Potri.001G044900	Potri.001G044900(AS)	POPTR_0001s03650	sp|Q9S9N8|NRAM6_ARATH	Metal transporter Nramp6 OS=Arabidopsis thaliana GN=NRAMP6 PE=2 SV=2	AT1G15960.1	| Symbols: NRAMP6, ATNRAMP6 | NRAMP metal ion transporter 6 | chr1:5482202-5485066 REVERSE LENGTH=527	LOC_Os06g46310.1	protein|metal transporter Nramp6, putative, expressed	IMGA|AC232874_1019.1	Natural resistance-associated macrophage protein AC232874.5 76731-72335 E EGN_Mt100125 20111014	GO:0006810|transport GO:0006828|manganese ion transport GO:0006875|cellular metal ion homeostasis GO:0015691|cadmium ion transport GO:0030001|metal ion transport GO:0070574|cadmium ion transmembrane transport	GO:0005215|transporter activity GO:0015086|cadmium ion transmembrane transporter activity GO:0015103|inorganic anion transmembrane transporter activity GO:0046873|metal ion transmembrane transporter activity	GO:0009507|chloroplast GO:0016020|membrane
pt2_00359	A	A7S	Potri.001G045900	Potri.001G045900(AS) Potri.001G045000(AS) Potri.001G045100(AS) Potri.001G045500(BS) Potri.001G046400(DS) Potri.001G045400(DS) Potri.001G046100(DS)	POPTR_0001s03660	sp|Q9S9N9|CCR1_ARATH	Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1	AT1G15950.1	| Symbols: CCR1, IRX4, ATCCR1 | cinnamoyl coa reductase 1 | chr1:5478855-5481915 FORWARD LENGTH=344	LOC_Os08g34280.1	protein|cinnamoyl-CoA reductase, putative, expressed	IMGA|Medtr5g072620.1	Dihydroflavonol 4-reductase-like protein chr5 29922618-29926018 E EGN_Mt100125 20111014	GO:0006623|protein targeting to vacuole GO:0009409|response to cold GO:0009809|lignin biosynthetic process GO:0044237|cellular metabolic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0016621|cinnamoyl-CoA reductase activity GO:0050662|coenzyme binding	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_00360	D	D2S	Potri.T134000	Potri.T134000(DS) Potri.001G045200(DS)	POPTR_0001s03680	sp|Q9M7K4|POT5_ARATH	Potassium transporter 5 OS=Arabidopsis thaliana GN=POT5 PE=1 SV=1	AT4G13420.1	| Symbols: HAK5, ATHAK5 | high affinity K+ transporter 5 | chr4:7797038-7802174 REVERSE LENGTH=785	LOC_Os01g70490.1	protein|potassium transporter, putative, expressed	IMGA|Medtr5g070670.1	Potassium transporter chr5 28933662-28942483 E EGN_Mt100125 20111014	GO:0006813|potassium ion transport GO:0071805|potassium ion transmembrane transport	GO:0009674|potassium:sodium symporter activity GO:0015079|potassium ion transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_00361	A	A2S	Potri.T130200	Potri.T130200(AS) Potri.001G134400(BS)	POPTR_0001s03690	sp|Q39214|RPM1_ARATH	Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1 PE=1 SV=1	AT3G07040.1	| Symbols: RPM1, RPS3 | NB-ARC domain-containing disease resistance protein | chr3:2226244-2229024 REVERSE LENGTH=926	LOC_Os08g32880.1	protein|disease resistance protein RPM1, putative, expressed	IMGA|Medtr5g027900.1	Disease resistance protein RPP8 chr5 11392567-11395939 H EGN_Mt100125 20111014	GO:0006952|defense response GO:0009626|plant-type hypersensitive response	GO:0000166|nucleotide binding GO:0005515|protein binding GO:0043531|ADP binding	GO:0005886|plasma membrane
pt2_00362	A	A1S	Potri.T130100	Potri.T130100(AS)	POPTR_0001s03700	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00363	A	A2S	Potri.T129800	Potri.T129800(AS) Potri.001G134500(BS)	POPTR_0001s03710	sp|Q39214|RPM1_ARATH	Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1 PE=1 SV=1	AT3G07040.1	| Symbols: RPM1, RPS3 | NB-ARC domain-containing disease resistance protein | chr3:2226244-2229024 REVERSE LENGTH=926	LOC_Os07g40810.1	protein|NBS-LRR type disease resistance protein, putative, expressed	IMGA|Medtr5g027910.1	Nbs-lrr resistance protein chr5 11402195-11405966 E EGN_Mt100125 20111014	GO:0006952|defense response GO:0009626|plant-type hypersensitive response	GO:0000166|nucleotide binding GO:0005515|protein binding GO:0043531|ADP binding	GO:0005886|plasma membrane
pt2_00364	C	C3S	Potri.T129700	Potri.T129700(CS) Potri.T129800(CS) Potri.T129900(CA)	sp|Q39214|RPM1_ARATH	Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1 PE=1 SV=1	AT3G07040.1	| Symbols: RPM1, RPS3 | NB-ARC domain-containing disease resistance protein | chr3:2226244-2229024 REVERSE LENGTH=926	LOC_Os08g32880.1	protein|disease resistance protein RPM1, putative, expressed	IMGA|Medtr5g027900.1	Disease resistance protein RPP8 chr5 11392567-11395939 H EGN_Mt100125 20111014	GO:0006952|defense response GO:0009626|plant-type hypersensitive response	GO:0000166|nucleotide binding GO:0005515|protein binding GO:0043531|ADP binding	GO:0005886|plasma membrane
pt2_00365	C	C1S	Potri.T129700	Potri.T129700(CS)	sp|Q39214|RPM1_ARATH	Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1 PE=1 SV=1	AT3G07040.1	| Symbols: RPM1, RPS3 | NB-ARC domain-containing disease resistance protein | chr3:2226244-2229024 REVERSE LENGTH=926	LOC_Os08g32880.1	protein|disease resistance protein RPM1, putative, expressed	IMGA|Medtr5g027900.1	Disease resistance protein RPP8 chr5 11392567-11395939 H EGN_Mt100125 20111014	GO:0006952|defense response GO:0009626|plant-type hypersensitive response	GO:0000166|nucleotide binding GO:0005515|protein binding GO:0043531|ADP binding	GO:0005886|plasma membrane
pt2_00366	A	A2S	Potri.001G000200	Potri.001G000200(AS) Potri.003G000200(DS)	POPTR_0001s03740	NA	NA	AT2G01050.1	| Symbols: | zinc ion binding;nucleic acid binding | chr2:68337-69884 REVERSE LENGTH=515	NA	NA	IMGA|Medtr5g062140.1	hypothetical protein chr5 25005759-25007108 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003676|nucleic acid binding GO:0008270|zinc ion binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00367	A	A2S	Potri.001G000300	Potri.001G000300(AS) Potri.001G000400(AA)	POPTR_0001s03750	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00368	A	A1S	Potri.001G000500	Potri.001G000500(AS)	POPTR_0001s03760	sp|Q00624|ASOL_BRANA	L-ascorbate oxidase homolog OS=Brassica napus GN=Bp10 PE=2 SV=1	AT1G55570.1	| Symbols: sks12 | SKU5 similar 12 | chr1:20757882-20759771 FORWARD LENGTH=555	LOC_Os05g40740.3	protein|monocopper oxidase, putative, expressed	IMGA|Medtr5g018270.1	L-ascorbate oxidase-like protein chr5 6538701-6543083 F EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005507|copper ion binding GO:0016491|oxidoreductase activity	GO:0005576|extracellular region
pt2_00369	A	A1S	Potri.001G000600	Potri.001G000600(AS)	POPTR_0001s03770	sp|Q00624|ASOL_BRANA	L-ascorbate oxidase homolog OS=Brassica napus GN=Bp10 PE=2 SV=1	AT1G55570.1	| Symbols: sks12 | SKU5 similar 12 | chr1:20757882-20759771 FORWARD LENGTH=555	LOC_Os05g40740.3	protein|monocopper oxidase, putative, expressed	IMGA|Medtr5g018270.1	L-ascorbate oxidase-like protein chr5 6538701-6543083 F EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005507|copper ion binding GO:0016491|oxidoreductase activity	GO:0005576|extracellular region
pt2_00370	A	A2S	Potri.001G000700	Potri.001G000700(AS) Potri.003G224000(DS)	POPTR_0001s03780	sp|Q9SKZ1|PUR_ARATH	Transcription factor Pur-alpha 1 OS=Arabidopsis thaliana GN=PURA1 PE=1 SV=2	AT2G32080.1	| Symbols: PUR ALPHA-1 | purin-rich alpha 1 | chr2:13642716-13644036 REVERSE LENGTH=296	LOC_Os01g15600.1	protein|PUR ALPHA-1, putative, expressed	NA	NA	GO:0006816|calcium ion transport GO:0006833|water transport GO:0006970|response to osmotic stress GO:0007030|Golgi organization GO:0007033|vacuole organization GO:0009651|response to salt stress GO:0009750|response to fructose stimulus GO:0046686|response to cadmium ion GO:0048767|root hair elongation	GO:0003676|nucleic acid binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_00371	A	A1S	Potri.001G000700	Potri.001G000700(AS)	POPTR_0001s03780	sp|Q9SKZ1|PUR_ARATH	Transcription factor Pur-alpha 1 OS=Arabidopsis thaliana GN=PURA1 PE=1 SV=2	AT2G32080.1	| Symbols: PUR ALPHA-1 | purin-rich alpha 1 | chr2:13642716-13644036 REVERSE LENGTH=296	LOC_Os01g15600.1	protein|PUR ALPHA-1, putative, expressed	NA	NA	GO:0006816|calcium ion transport GO:0006833|water transport GO:0006970|response to osmotic stress GO:0007030|Golgi organization GO:0007033|vacuole organization GO:0009651|response to salt stress GO:0009750|response to fructose stimulus GO:0046686|response to cadmium ion GO:0048767|root hair elongation	GO:0003676|nucleic acid binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_00372	A	A1S	Potri.001G000800	Potri.001G000800(AS)	POPTR_0001s03800	sp|O81635|ATK4_ARATH	Kinesin-4 OS=Arabidopsis thaliana GN=ATK4 PE=1 SV=2	AT1G55550.1	| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:20748915-20752862 FORWARD LENGTH=859	LOC_Os01g15540.1	protein|kinesin motor domain containing protein, putative, expressed	IMGA|Medtr5g031470.1	Kinesin-4 chr5 13075037-13067334 E EGN_Mt100125 20111014	NA	GO:0003777|microtubule motor activity GO:0005524|ATP binding	GO:0005739|mitochondrion
pt2_00373	A	A1S	Potri.001G000900	Potri.001G000900(AS)	POPTR_0001s03810	NA	NA	AT3G13410.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55546.1); Has 49 Blast hits to 49 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | chr3:4362149-4364032 REVERSE LENGTH=321	LOC_Os11g03380.1	protein|expressed protein	NA	NA	GO:0000902|cell morphogenesis GO:0006816|calcium ion transport GO:0007030|Golgi organization GO:0007033|vacuole organization GO:0008150|biological_process GO:0009651|response to salt stress GO:0016049|cell growth GO:0048193|Golgi vesicle transport	GO:0003674|molecular_function	GO:0005783|endoplasmic reticulum
pt2_00374	A	A1S	Potri.001G001000	Potri.001G001000(AS)	POPTR_0001s03820	NA	NA	NA	NA	LOC_Os01g15550.1	protein|expressed protein	NA	NA	NA	NA	NA
pt2_00375	A	A2S	Potri.001G001100	Potri.001G001100(AS) Potri.003G223500(DS)	POPTR_0001s03830	sp|O80622|EXP15_ARATH	Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=2 SV=2	AT2G03090.1	| Symbols: ATEXPA15, EXP15, ATEXP15, ATHEXP ALPHA 1.3, EXPA15 | expansin A15 | chr2:917361-918554 REVERSE LENGTH=253	LOC_Os02g51040.1	protein|expansin precursor, putative, expressed	IMGA|Medtr5g041700.1	Expansin chr5 17886520-17884348 F EGN_Mt100125 20111014	GO:0006949|syncytium formation GO:0009664|plant-type cell wall organization GO:0009826|unidimensional cell growth GO:0009828|plant-type cell wall loosening GO:0009831|plant-type cell wall modification involved in multidimensional cell growth GO:0010089|xylem development GO:0044036|cell wall macromolecule metabolic process	NA	GO:0005576|extracellular region
pt2_00376	A	A1S	Potri.001G001200	Potri.001G001200(AS)	POPTR_0001s03840	NA	NA	AT1G55540.1	| Symbols: emb1011 | Nuclear pore complex protein | chr1:20734759-20743049 REVERSE LENGTH=1816	NA	NA	NA	NA	GO:0007062|sister chromatid cohesion GO:0007131|reciprocal meiotic recombination GO:0008150|biological_process GO:0009790|embryo development GO:0009793|embryo development ending in seed dormancy GO:0033044|regulation of chromosome organization GO:0042138|meiotic DNA double-strand break formation GO:0045132|meiotic chromosome segregation	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005739|mitochondrion
pt2_00377	C	C1A	Potri.001G001200	Potri.001G001200(CA)	NA	NA	AT1G55540.1	| Symbols: emb1011 | Nuclear pore complex protein | chr1:20734759-20743049 REVERSE LENGTH=1816	NA	NA	NA	NA	GO:0007062|sister chromatid cohesion GO:0007131|reciprocal meiotic recombination GO:0008150|biological_process GO:0009790|embryo development GO:0009793|embryo development ending in seed dormancy GO:0033044|regulation of chromosome organization GO:0042138|meiotic DNA double-strand break formation GO:0045132|meiotic chromosome segregation	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005739|mitochondrion
pt2_00378	A	A1S	Potri.001G001300	Potri.001G001300(AS)	POPTR_0001s03860	NA	NA	AT4G26410.1	| Symbols: | Uncharacterised conserved protein UCP022280 | chr4:13346760-13348791 FORWARD LENGTH=263	LOC_Os03g20860.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005739|mitochondrion
pt2_00379	C	C1S	Potri.001G001400	Potri.001G001400(CS)	NA	NA	AT1G55535.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13420.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr1:20732081-20733802 REVERSE LENGTH=260	LOC_Os07g12220.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_00380	A	A1S	Potri.001G001500	Potri.001G001500(AS)	POPTR_0001s03880	sp|Q8LPN7|RNG1L_ARATH	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=2 SV=1	AT5G56340.1	| Symbols: ATCRT1 | RING/U-box superfamily protein | chr5:22818254-22819444 FORWARD LENGTH=396	LOC_Os05g40980.1	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr1g114320.1	RING finger protein chr1 33124623-33126845 F EGN_Mt100125 20111014	NA	GO:0008270|zinc ion binding	NA
pt2_00381	A	A1S	Potri.001G001600	Potri.001G001600(AS)	POPTR_0001s03890	sp|Q42954|KPYC_TOBAC	Pyruvate kinase, cytosolic isozyme OS=Nicotiana tabacum PE=2 SV=1	AT5G56350.1	| Symbols: | Pyruvate kinase family protein | chr5:22820254-22822529 REVERSE LENGTH=498	LOC_Os01g16960.1	protein|pyruvate kinase, putative, expressed	IMGA|Medtr5g014140.1	Pyruvate kinase chr5 4444843-4450264 H EGN_Mt100125 20111014	GO:0006094|gluconeogenesis GO:0006096|glycolysis GO:0006865|amino acid transport GO:0007010|cytoskeleton organization GO:0010498|proteasomal protein catabolic process	GO:0000287|magnesium ion binding GO:0003824|catalytic activity GO:0004743|pyruvate kinase activity GO:0030955|potassium ion binding	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_00382	A	A1S	Potri.001G001700	Potri.001G001700(AS)	POPTR_0001s03900	sp|O08795|GLU2B_MOUSE	Glucosidase 2 subunit beta OS=Mus musculus GN=Prkcsh PE=1 SV=1	AT5G56360.1	| Symbols: PSL4 | calmodulin-binding protein | chr5:22823586-22827950 REVERSE LENGTH=647	LOC_Os01g16970.1	protein|glucosidase II beta subunit-like domain containing protein, expressed	NA	NA	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0009086|methionine biosynthetic process GO:0030244|cellulose biosynthetic process GO:0042742|defense response to bacterium GO:0048193|Golgi vesicle transport	GO:0005516|calmodulin binding	GO:0005783|endoplasmic reticulum GO:0009507|chloroplast
pt2_00383	C	C1S	Potri.001G001800	Potri.001G001800(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00384	A	A1S	Potri.001G001800	Potri.001G001800(AS)	POPTR_0001s03920	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00385	A	A2S	Potri.001G001900	Potri.001G001900(AS) Potri.001G001800(AA)	POPTR_0001s03930	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00386	A	A1S	Potri.001G002000	Potri.001G002000(AS)	POPTR_0001s03940	sp|Q4R5D9|YTHD2_MACFA	YTH domain family protein 2 OS=Macaca fascicularis GN=YTHDF2 PE=2 SV=1	AT3G13460.1	| Symbols: ECT2 | evolutionarily conserved C-terminal region 2 | chr3:4385274-4388220 REVERSE LENGTH=667	LOC_Os03g06240.2	protein|YT521-B-like family domain containing protein, expressed	NA	NA	NA	GO:0005515|protein binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol
pt2_00387	A	A1S	Potri.001G002200	Potri.001G002200(AS)	POPTR_0001s03950	sp|O65351|SUBL_ARATH	Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1	AT4G26330.1	| Symbols: UNE17, ATSBT3.18 | Subtilisin-like serine endopeptidase family protein | chr4:13320408-13323461 FORWARD LENGTH=746	LOC_Os03g06290.1	protein|OsSub27 - Putative Subtilisin homologue, expressed	IMGA|Medtr5g025010.1	Subtilisin-like protease chr5 9863093-9866617 E EGN_Mt100125 20111014	GO:0006508|proteolysis GO:0008152|metabolic process GO:0009567|double fertilization forming a zygote and endosperm GO:0043086|negative regulation of catalytic activity	GO:0004252|serine-type endopeptidase activity GO:0042802|identical protein binding	GO:0005618|cell wall GO:0005737|cytoplasm GO:0005777|peroxisome
pt2_00388	A	A1S	Potri.001G002300	Potri.001G002300(AS)	POPTR_0001s03960	sp|Q9FM85|Y5564_ARATH	Probable receptor-like protein kinase At5g56460 OS=Arabidopsis thaliana GN=At5g56460 PE=1 SV=1	AT5G56460.1	| Symbols: | Protein kinase superfamily protein | chr5:22865509-22867866 FORWARD LENGTH=408	LOC_Os03g06330.1	protein|tyrosine protein kinase domain containing protein, putative, expressed	IMGA|Medtr1g015020.1	Protein kinase 2B chr1 4061824-4059575 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006499|N-terminal protein myristoylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_00389	A	A1S	Potri.001G002400	Potri.001G002400(AS)	POPTR_0001s03970	NA	NA	NA	NA	LOC_Os03g45450.1	protein|WRKY60, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0009867|jasmonic acid mediated signaling pathway GO:0042742|defense response to bacterium GO:0050832|defense response to fungus	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_00390	A	A2S	Potri.001G002500	Potri.001G002500(AS) Potri.003G222400(DS)	POPTR_0001s03980	sp|Q9LJE4|CPNB2_ARATH	Chaperonin 60 subunit beta 2, chloroplastic OS=Arabidopsis thaliana GN=CPN60B2 PE=1 SV=1	AT3G13470.1	| Symbols: | TCP-1/cpn60 chaperonin family protein | chr3:4389685-4392624 FORWARD LENGTH=596	LOC_Os06g02380.2	protein|T-complex protein, putative, expressed	IMGA|Medtr1g090130.1	Chaperonin CPN60-2 chr1 24825922-24820135 F EGN_Mt100125 20111014	GO:0006457|protein folding GO:0009658|chloroplast organization GO:0042026|protein refolding GO:0044267|cellular protein metabolic process GO:0048481|ovule development	GO:0005524|ATP binding	GO:0005634|nucleus GO:0005730|nucleolus GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope GO:0022626|cytosolic ribosome
pt2_00391	A	A2S	Potri.001G002600	Potri.001G002600(AS) Potri.003G222300(DS)	POPTR_0001s03990	sp|Q9LVC3|PUM12_ARATH	Pumilio homolog 12 OS=Arabidopsis thaliana GN=APUM12 PE=2 SV=2	AT5G56510.1	| Symbols: APUM12, PUM12 | pumilio 12 | chr5:22881721-22883842 FORWARD LENGTH=596	LOC_Os11g37090.1	protein|pumilio-family RNA binding repeat domain containing protein, expressed	IMGA|Medtr5g063650.1	Pumilio domain-containing protein chr5 25669388-25673667 I EGN_Mt100125 20111014	NA	GO:0003723|RNA binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_00392	A	A1S	Potri.001G002700	Potri.001G002700(AS)	POPTR_0001s04000	NA	NA	AT1G55480.1	| Symbols: ZKT | protein containing PDZ domain, a K-box domain, and a TPR region | chr1:20713822-20715351 FORWARD LENGTH=335	LOC_Os07g07540.1	protein|SHOOT1 protein, putative, expressed	NA	NA	GO:0009611|response to wounding GO:0010264|myo-inositol hexakisphosphate biosynthetic process GO:0015979|photosynthesis GO:0016117|carotenoid biosynthetic process	NA	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope
pt2_00393	A	A1S	Potri.001G002800	Potri.001G002800(AS)	POPTR_0001s04010	sp|Q50EK0|C16B2_PICSI	Cytochrome P450 716B2 OS=Picea sitchensis GN=CYP716B2 PE=2 SV=1	AT5G36110.1	| Symbols: CYP716A1 | cytochrome P450, family 716, subfamily A, polypeptide 1 | chr5:14195377-14197613 FORWARD LENGTH=477	LOC_Os07g33580.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g091760.1	Taxane 13-alpha-hydroxylase chr5 39004461-39002697 H EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005576|extracellular region
pt2_00394	A	A1S	Potri.001G003000	Potri.001G003000(AS)	POPTR_0001s04020	sp|Q50EK0|C16B2_PICSI	Cytochrome P450 716B2 OS=Picea sitchensis GN=CYP716B2 PE=2 SV=1	AT5G36110.1	| Symbols: CYP716A1 | cytochrome P450, family 716, subfamily A, polypeptide 1 | chr5:14195377-14197613 FORWARD LENGTH=477	LOC_Os07g33620.1	protein|cytochrome P450 domain containing protein, expressed	IMGA|Medtr5g092150.1	Taxane 13-alpha-hydroxylase chr5 39206359-39203675 E EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005576|extracellular region
pt2_00395	A	A1S	Potri.001G003100	Potri.001G003100(AS)	POPTR_0001s04030	sp|Q50EK0|C16B2_PICSI	Cytochrome P450 716B2 OS=Picea sitchensis GN=CYP716B2 PE=2 SV=1	AT5G36110.1	| Symbols: CYP716A1 | cytochrome P450, family 716, subfamily A, polypeptide 1 | chr5:14195377-14197613 FORWARD LENGTH=477	LOC_Os07g33620.1	protein|cytochrome P450 domain containing protein, expressed	IMGA|Medtr5g092150.1	Taxane 13-alpha-hydroxylase chr5 39206359-39203675 E EGN_Mt100125 20111014	GO:0006569|tryptophan catabolic process GO:0009684|indoleacetic acid biosynthetic process GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005576|extracellular region
pt2_00396	A	A1S	Potri.001G003200	Potri.001G003200(AS)	POPTR_0001s04040	sp|Q8VZG8|Y4885_ARATH	Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=1 SV=3	AT4G04220.1	| Symbols: AtRLP46, RLP46 | receptor like protein 46 | chr4:2033427-2035946 FORWARD LENGTH=811	LOC_Os02g06600.1	protein|receptor-like protein kinase 2 precursor, putative, expressed	IMGA|Medtr1g039220.1	Receptor protein kinase-like protein chr1 10530698-10534277 H EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0006355|regulation of transcription, DNA-dependent GO:0006612|protein targeting to membrane GO:0006952|defense response GO:0007165|signal transduction GO:0009617|response to bacterium GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0031348|negative regulation of defense response GO:0035304|regulation of protein dephosphorylation	GO:0016301|kinase activity	GO:0005886|plasma membrane
pt2_00397	A	A1S	Potri.001G003300	Potri.001G003300(AS)	POPTR_0001s04050	NA	NA	AT3G13480.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55475.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr3:4393184-4393848 REVERSE LENGTH=172	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00398	A	A1S	Potri.001G003400	Potri.001G003400(AS)	POPTR_0001s04060	NA	NA	AT4G09830.1	| Symbols: | Uncharacterised conserved protein UCP009193 | chr4:6188866-6190591 FORWARD LENGTH=191	LOC_Os09g19640.1	protein|holocarboxylase synthetase, putative, expressed	IMGA|Medtr1g106890.1	hypothetical protein chr1 31497001-31491671 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00399	A	A1S	Potri.001G003500	Potri.001G003500(AS)	POPTR_0001s04070	NA	NA	AT5G56520.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55365.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:22885226-22885531 FORWARD LENGTH=101	NA	NA	NA	NA	GO:0006661|phosphatidylinositol biosynthetic process GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00400	A	A2S	Potri.001G003600	Potri.001G003600(AS) Potri.003G221400(DS)	POPTR_0001s04080	sp|P74003|PRMC_SYNY3	Release factor glutamine methyltransferase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=prmC PE=3 SV=1	AT5G64150.1	| Symbols: | RNA methyltransferase family protein | chr5:25668997-25670731 REVERSE LENGTH=377	LOC_Os12g41830.1	protein|Methyltransferase small domain containing protein, expressed	NA	NA	GO:0006479|protein methylation GO:0006783|heme biosynthetic process GO:0032259|methylation	GO:0003676|nucleic acid binding GO:0003824|catalytic activity GO:0008168|methyltransferase activity GO:0008276|protein methyltransferase activity	GO:0009507|chloroplast
pt2_00401	A	A1S	Potri.001G003700	Potri.001G003700(AS)	POPTR_0001s04090	sp|Q2T9S3|RPC6_BOVIN	DNA-directed RNA polymerase III subunit RPC6 OS=Bos taurus GN=POLR3F PE=2 SV=1	AT5G23710.1	| Symbols: | DNA binding;DNA-directed RNA polymerases | chr5:7996528-7997220 REVERSE LENGTH=230	LOC_Os06g40110.1	protein|RNA polymerase Rpc34 subunit family protein, expressed	NA	NA	GO:0006351|transcription, DNA-dependent	GO:0003677|DNA binding GO:0003899|DNA-directed RNA polymerase activity	GO:0005634|nucleus GO:0009507|chloroplast
pt2_00402	A	A1S	Potri.001G003800	Potri.001G003800(AS)	POPTR_0001s04100	NA	NA	AT1G55360.1	| Symbols: | Protein of Unknown Function (DUF239) | chr1:20666526-20668502 REVERSE LENGTH=422	LOC_Os07g38590.1	protein|carboxyl-terminal peptidase, putative, expressed	IMGA|Medtr1g079730.1	hypothetical protein chr1 19938198-19941909 E EGN_Mt100125 20111014	GO:0008150|biological_process GO:0019344|cysteine biosynthetic process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005576|extracellular region
pt2_00403	A	A2S	Potri.001G003900	Potri.001G003900(AS) Potri.003G221100(BS)	POPTR_0001s04110	sp|O35920|CAN9_RAT	Calpain-9 (Fragment) OS=Rattus norvegicus GN=Capn9 PE=2 SV=1	AT1G55350.4	| Symbols: DEK1, ATDEK1 | calpain-type cysteine protease family | chr1:20654463-20664501 REVERSE LENGTH=2151	LOC_Os02g47970.1	protein|calpain, putative, expressed	NA	NA	GO:0001708|cell fate specification GO:0007062|sister chromatid cohesion GO:0007155|cell adhesion GO:0009793|embryo development ending in seed dormancy GO:0009880|embryonic pattern specification GO:0010072|primary shoot apical meristem specification GO:0010090|trichome morphogenesis GO:0010228|vegetative to reproductive phase transition of meristem GO:0010431|seed maturation GO:0040014|regulation of multicellular organism growth GO:0045010|actin nucleation GO:0045595|regulation of cell differentiation GO:0048765|root hair cell differentiation GO:0071555|cell wall organization	GO:0004197|cysteine-type endopeptidase activity	GO:0005737|cytoplasm GO:0005783|endoplasmic reticulum GO:0005886|plasma membrane
pt2_00404	A	A1S	Potri.001G004000	Potri.001G004000(AS)	POPTR_0001s04120	NA	NA	AT1G55340.1	| Symbols: | Protein of unknown function (DUF1639) | chr1:20652605-20653469 FORWARD LENGTH=205	LOC_Os03g59250.1	protein|expressed protein	IMGA|Medtr5g056110.1	hypothetical protein chr5 22586762-22585938 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00405	A	A1S	Potri.001G004100	Potri.001G004100(AS)	POPTR_0001s04130	NA	NA	NA	NA	NA	NA	NA	NA	GO:0048767|root hair elongation	GO:0005515|protein binding	GO:0005886|plasma membrane GO:0031225|anchored to membrane
pt2_00406	A	A1S	Potri.001G004200	Potri.001G004200(AS)	POPTR_0001s04140	sp|F4I096|MED13_ARATH	Mediator of RNA polymerase II transcription subunit 13 OS=Arabidopsis thaliana GN=MED13 PE=1 SV=1	AT1G55325.2	| Symbols: GCT | RNA polymerase II transcription mediators | chr1:20637594-20647714 FORWARD LENGTH=2001	LOC_Os05g37500.1	protein|expressed protein	NA	NA	GO:0006357|regulation of transcription from RNA polymerase II promoter GO:0040034|regulation of development, heterochronic GO:0090213|regulation of radial pattern formation	GO:0001104|RNA polymerase II transcription cofactor activity	GO:0005634|nucleus GO:0016592|mediator complex
pt2_00407	A	A1S	Potri.001G004300	Potri.001G004300(AS)	POPTR_0001s04150	sp|Q2G6X5|EFP_NOVAD	Elongation factor P OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=efp PE=3 SV=1	AT4G26310.1	| Symbols: | elongation factor P (EF-P) family protein | chr4:13314006-13316066 REVERSE LENGTH=258	LOC_Os03g59160.1	protein|elongation factor P, putative, expressed	NA	NA	GO:0006414|translational elongation GO:0043043|peptide biosynthetic process	GO:0003746|translation elongation factor activity	GO:0005737|cytoplasm GO:0009507|chloroplast
pt2_00408	A	A1S	Potri.001G004400	Potri.001G004400(AS)	POPTR_0001s04160	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00409	A	A1S	Potri.001G004500	Potri.001G004500(AS)	POPTR_0001s04170	sp|Q9CR62|M2OM_MOUSE	Mitochondrial 2-oxoglutarate/malate carrier protein OS=Mus musculus GN=Slc25a11 PE=1 SV=3	AT5G19760.1	| Symbols: | Mitochondrial substrate carrier family protein | chr5:6679591-6681845 REVERSE LENGTH=298	LOC_Os05g11780.1	protein|mitochondrial carrier protein, putative, expressed	IMGA|Medtr5g032420.1	Mitochondrial 2-oxoglutarate/malate carrier protein chr5 13491772-13493235 F EGN_Mt100125 20111014	GO:0006007|glucose catabolic process GO:0006096|glycolysis GO:0006810|transport GO:0006835|dicarboxylic acid transport GO:0006839|mitochondrial transport GO:0009060|aerobic respiration GO:0035674|tricarboxylic acid transmembrane transport GO:0046686|response to cadmium ion GO:0055085|transmembrane transport	GO:0005310|dicarboxylic acid transmembrane transporter activity GO:0015142|tricarboxylic acid transmembrane transporter activity GO:0017077|oxidative phosphorylation uncoupler activity	GO:0005618|cell wall GO:0005739|mitochondrion GO:0005743|mitochondrial inner membrane GO:0005774|vacuolar membrane GO:0009506|plasmodesma GO:0009507|chloroplast GO:0009941|chloroplast envelope
pt2_00410	A	A1S	Potri.001G004600	Potri.001G004600(AS)	POPTR_0001s04180	sp|P33627|TBA6_MAIZE	Tubulin alpha-6 chain OS=Zea mays GN=TUBA6 PE=2 SV=1	AT5G19780.1	| Symbols: TUA5 | tubulin alpha-5 | chr5:6687212-6688926 FORWARD LENGTH=450	LOC_Os07g38730.1	protein|tubulin/FtsZ domain containing protein, putative, expressed	IMGA|contig_76569_1.1	Tubulin alpha-7 chain contig_76569 5816-1428 H PREDN 20111014	GO:0006184|GTP catabolic process GO:0051258|protein polymerization GO:0071258|cellular response to gravity	GO:0003924|GTPase activity GO:0005198|structural molecule activity GO:0005200|structural constituent of cytoskeleton GO:0005525|GTP binding	GO:0005618|cell wall GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0045298|tubulin complex GO:0048046|apoplast
pt2_00411	A	A1S	Potri.001G004700	Potri.001G004700(AS)	POPTR_0001s04190	sp|Q6J9S1|RA211_ARATH	Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana GN=RAP2-11 PE=2 SV=1	AT5G19790.1	| Symbols: RAP2.11 | related to AP2 11 | chr5:6689271-6690032 REVERSE LENGTH=253	LOC_Os07g10410.1	protein|AP2 domain containing protein, expressed	IMGA|contig_81134_1.1	Ethylene responsive transcription factor 2b contig_81134 2959-3876 H PREDN 20111014	GO:0000302|response to reactive oxygen species GO:0009723|response to ethylene stimulus GO:0035865|cellular response to potassium ion GO:0048528|post-embryonic root development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_00412	A	A2S	Potri.001G004800	Potri.001G004800(AS) Potri.003G220100(DS)	POPTR_0001s04200	sp|Q8BKC5|IPO5_MOUSE	Importin-5 OS=Mus musculus GN=Ipo5 PE=1 SV=3	AT5G19820.1	| Symbols: emb2734 | ARM repeat superfamily protein | chr5:6695731-6701247 REVERSE LENGTH=1116	LOC_Os07g38760.1	protein|HEAT repeat family protein, putative, expressed	NA	NA	GO:0009165|nucleotide biosynthetic process GO:0009793|embryo development ending in seed dormancy GO:0052541|plant-type cell wall cellulose metabolic process GO:0052546|cell wall pectin metabolic process	GO:0016829|lyase activity	GO:0005618|cell wall GO:0005829|cytosol GO:0030089|phycobilisome
pt2_00413	A	A1S	Potri.001G004900	Potri.001G004900(AS)	POPTR_0001s04210	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00414	G	G1	NA	NA	POPTR_0001s04220	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00415	A	A1S	Potri.001G005000	Potri.001G005000(AS)	POPTR_0001s04230	sp|Q6NLS8|PTHM_ARATH	Peptidyl-tRNA hydrolase, mitochondrial OS=Arabidopsis thaliana GN=At5g19830 PE=2 SV=1	AT5G19830.1	| Symbols: | Peptidyl-tRNA hydrolase family protein | chr5:6703383-6705125 FORWARD LENGTH=219	LOC_Os03g22610.2	protein|peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed	NA	NA	GO:0006412|translation GO:0006783|heme biosynthetic process	GO:0004045|aminoacyl-tRNA hydrolase activity	GO:0005739|mitochondrion
pt2_00416	A	A1S	Potri.001G005000	Potri.001G005000(AS)	POPTR_0001s04230	sp|Q6NLS8|PTHM_ARATH	Peptidyl-tRNA hydrolase, mitochondrial OS=Arabidopsis thaliana GN=At5g19830 PE=2 SV=1	AT5G19830.1	| Symbols: | Peptidyl-tRNA hydrolase family protein | chr5:6703383-6705125 FORWARD LENGTH=219	LOC_Os03g22610.2	protein|peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed	NA	NA	GO:0006412|translation GO:0006783|heme biosynthetic process	GO:0004045|aminoacyl-tRNA hydrolase activity	GO:0005739|mitochondrion
pt2_00417	A	A1S	Potri.001G005000	Potri.001G005000(AS)	POPTR_0001s04230	sp|Q6NLS8|PTHM_ARATH	Peptidyl-tRNA hydrolase, mitochondrial OS=Arabidopsis thaliana GN=At5g19830 PE=2 SV=1	AT5G19830.1	| Symbols: | Peptidyl-tRNA hydrolase family protein | chr5:6703383-6705125 FORWARD LENGTH=219	LOC_Os03g22610.2	protein|peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed	NA	NA	GO:0006412|translation GO:0006783|heme biosynthetic process	GO:0004045|aminoacyl-tRNA hydrolase activity	GO:0005739|mitochondrion
pt2_00418	A	A1S	Potri.001G005100	Potri.001G005100(AS)	POPTR_0001s04240	sp|Q38850|MYB5_ARATH	Transcription repressor MYB5 OS=Arabidopsis thaliana GN=MYB5 PE=1 SV=1	AT3G13540.1	| Symbols: ATMYB5, MYB5 | myb domain protein 5 | chr3:4420239-4421443 FORWARD LENGTH=249	LOC_Os01g50110.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr5g078140.1	P-type R2R3 Myb protein chr5 32379000-32381283 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009845|seed germination GO:0010026|trichome differentiation GO:0010090|trichome morphogenesis GO:0010214|seed coat development GO:0010468|regulation of gene expression GO:0048354|mucilage biosynthetic process involved in seed coat development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00419	A	A1S	Potri.001G005300	Potri.001G005300(AS)	POPTR_0001s04250	NA	NA	NA	NA	NA	NA	NA	NA	NA	GO:0016787|hydrolase activity	GO:0005737|cytoplasm
pt2_00420	A	A1S	Potri.001G005400	Potri.001G005400(AS)	POPTR_0001s04260	sp|Q84MC2|LOG8_ARATH	Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8 OS=Arabidopsis thaliana GN=LOG8 PE=1 SV=1	AT5G11950.2	| Symbols: | Putative lysine decarboxylase family protein | chr5:3855072-3856815 FORWARD LENGTH=216	LOC_Os01g51210.1	protein|uncharacterized protein PA4923, putative, expressed	NA	NA	GO:0009089|lysine biosynthetic process via diaminopimelate	GO:0042803|protein homodimerization activity	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol
pt2_00421	A	A1S	Potri.001G005500	Potri.001G005500(AS)	POPTR_0001s04270	NA	NA	AT4G08810.1	| Symbols: SUB1 | calcium ion binding | chr4:5616204-5617862 REVERSE LENGTH=552	LOC_Os07g43990.1	protein|expressed protein	IMGA|Medtr5g069410.1	hypothetical protein chr5 28434207-28436398 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0005509|calcium ion binding GO:0016757|transferase activity, transferring glycosyl groups	GO:0005794|Golgi apparatus GO:0042175|nuclear outer membrane-endoplasmic reticulum membrane network
pt2_00422	A	A1S	Potri.001G005600	Potri.001G005600(AS)	POPTR_0001s04280	NA	NA	AT3G13600.1	| Symbols: | calmodulin-binding family protein | chr3:4445102-4447383 FORWARD LENGTH=605	LOC_Os10g27170.1	protein|calmodulin-binding protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0005516|calmodulin binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00423	G	G2	NA	NA	POPTR_0001s04290	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00424	A	A1S	Potri.001G005700	Potri.001G005700(AS)	POPTR_0001s04290	sp|Q8W496|PTC52_ARATH	Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidopsis thaliana GN=PTC52 PE=2 SV=1	AT4G25650.1	| Symbols: ACD1-LIKE, PTC52, TIC55-IV | ACD1-like | chr4:13081021-13083153 REVERSE LENGTH=536	LOC_Os03g59110.1	protein|pheophorbide a oxygenase, chloroplast precursor, putative, expressed	NA	NA	GO:0055114|oxidation-reduction process	GO:0009055|electron carrier activity GO:0010277|chlorophyllide a oxygenase [overall] activity GO:0016491|oxidoreductase activity GO:0051537|2 iron, 2 sulfur cluster binding	GO:0009507|chloroplast GO:0009536|plastid GO:0009941|chloroplast envelope
pt2_00425	A	A2S	Potri.001G005700	Potri.001G005700(AS) Potri.001G005900(DS)	POPTR_0001s04290	sp|Q8W496|PTC52_ARATH	Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidopsis thaliana GN=PTC52 PE=2 SV=1	AT4G25650.1	| Symbols: ACD1-LIKE, PTC52, TIC55-IV | ACD1-like | chr4:13081021-13083153 REVERSE LENGTH=536	LOC_Os03g59110.1	protein|pheophorbide a oxygenase, chloroplast precursor, putative, expressed	NA	NA	GO:0055114|oxidation-reduction process	GO:0009055|electron carrier activity GO:0010277|chlorophyllide a oxygenase [overall] activity GO:0016491|oxidoreductase activity GO:0051537|2 iron, 2 sulfur cluster binding	GO:0009507|chloroplast GO:0009536|plastid GO:0009941|chloroplast envelope
pt2_00426	A	A1S	Potri.001G005800	Potri.001G005800(AS)	POPTR_0001s04300	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00427	A	A1S	Potri.001G005900	Potri.001G005900(AS)	POPTR_0001s04310	sp|Q8W496|PTC52_ARATH	Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidopsis thaliana GN=PTC52 PE=2 SV=1	AT4G25650.1	| Symbols: ACD1-LIKE, PTC52, TIC55-IV | ACD1-like | chr4:13081021-13083153 REVERSE LENGTH=536	LOC_Os03g59110.1	protein|pheophorbide a oxygenase, chloroplast precursor, putative, expressed	NA	NA	GO:0055114|oxidation-reduction process	GO:0009055|electron carrier activity GO:0010277|chlorophyllide a oxygenase [overall] activity GO:0016491|oxidoreductase activity GO:0051537|2 iron, 2 sulfur cluster binding	GO:0009507|chloroplast GO:0009536|plastid GO:0009941|chloroplast envelope
pt2_00428	C	C1S	Potri.001G006000	Potri.001G006000(CS)	sp|Q682H0|HA22F_ARATH	HVA22-like protein f OS=Arabidopsis thaliana GN=HVA22F PE=2 SV=1	AT2G42820.1	| Symbols: HVA22F | HVA22-like protein F | chr2:17817460-17818301 REVERSE LENGTH=158	LOC_Os01g52780.1	protein|HVA22, putative, expressed	IMGA|Medtr5g091800.1	HVA22-like protein f chr5 39023425-39024753 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_00429	A	A1S	Potri.001G006200	Potri.001G006200(AS)	POPTR_0001s04330	NA	NA	AT3G13600.1	| Symbols: | calmodulin-binding family protein | chr3:4445102-4447383 FORWARD LENGTH=605	LOC_Os07g43970.1	protein|calmodulin-binding protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0005516|calmodulin binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00430	A	A2S	Potri.001G006300	Potri.001G006300(AS) Potri.003G218700(DS)	POPTR_0001s04340	sp|Q9R1C0|TAF7_MOUSE	Transcription initiation factor TFIID subunit 7 OS=Mus musculus GN=Taf7 PE=1 SV=1	AT1G55300.1	| Symbols: TAF7 | TBP-associated factor 7 | chr1:20628170-20629490 REVERSE LENGTH=203	LOC_Os05g28010.1	protein|TATA-binding protein-associated factor TAFII55 family protein, putative, expressed	NA	NA	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0006366|transcription from RNA polymerase II promoter GO:0006367|transcription initiation from RNA polymerase II promoter	NA	GO:0005634|nucleus GO:0005669|transcription factor TFIID complex
pt2_00431	A	A1S	Potri.001G006400	Potri.001G006400(AS)	POPTR_0001s04350	NA	NA	AT3G13570.1	| Symbols: SCL30A, At-SCL30A | SC35-like splicing factor 30A | chr3:4429564-4431602 REVERSE LENGTH=262	LOC_Os07g43950.1	protein|RNA recognition motif containing protein, putative, expressed	IMGA|Medtr5g079870.1	"Splicing factor, arginine/serine-rich 13A" chr5 33148550-33152544 E EGN_Mt100125 20111014	GO:0000398|mRNA splicing, via spliceosome GO:0006355|regulation of transcription, DNA-dependent GO:0006396|RNA processing GO:0008380|RNA splicing GO:0030422|production of siRNA involved in RNA interference GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0043687|post-translational protein modification GO:0045893|positive regulation of transcription, DNA-dependent	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding GO:0005515|protein binding GO:0042802|identical protein binding	GO:0005634|nucleus GO:0005730|nucleolus GO:0005829|cytosol GO:0005886|plasma membrane GO:0016607|nuclear speck GO:0035061|interchromatin granule
pt2_00432	A	A1S	Potri.001G006500	Potri.001G006500(AS)	POPTR_0001s04360	sp|Q94CD8|E134_ARATH	Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana GN=At3g13560 PE=1 SV=1	AT3G13560.2	| Symbols: | O-Glycosyl hydrolases family 17 protein | chr3:4425484-4427284 REVERSE LENGTH=505	LOC_Os07g38930.2	protein|glucan endo-1,3-beta-glucosidase precursor, putative, expressed	IMGA|Medtr5g078200.1	"Glucan endo-1,3-beta-glucosidase" chr5 32414043-32418084 E EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0043169|cation binding	GO:0005886|plasma membrane GO:0031225|anchored to membrane GO:0046658|anchored to plasma membrane
pt2_00433	A	A1S	Potri.001G006600	Potri.001G006600(AS)	POPTR_0001s04370	sp|Q84P17|AEE18_ARATH	Probable acyl-activating enzyme 18, peroxisomal OS=Arabidopsis thaliana GN=AAE18 PE=2 SV=1	AT1G55320.1	| Symbols: AAE18 | acyl-activating enzyme 18 | chr1:20633371-20636659 FORWARD LENGTH=727	LOC_Os03g59080.1	protein|AMP-binding enzyme, putative, expressed	NA	NA	GO:0008152|metabolic process GO:0009850|auxin metabolic process	GO:0003824|catalytic activity GO:0016874|ligase activity	GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0005777|peroxisome
pt2_00434	A	A1S	Potri.001G006700	Potri.001G006700(AS)	POPTR_0001s04380	sp|Q84P17|AEE18_ARATH	Probable acyl-activating enzyme 18, peroxisomal OS=Arabidopsis thaliana GN=AAE18 PE=2 SV=1	AT1G55320.1	| Symbols: AAE18 | acyl-activating enzyme 18 | chr1:20633371-20636659 FORWARD LENGTH=727	LOC_Os03g59080.1	protein|AMP-binding enzyme, putative, expressed	NA	NA	GO:0008152|metabolic process GO:0009850|auxin metabolic process	GO:0003824|catalytic activity GO:0016874|ligase activity	GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0005777|peroxisome
pt2_00435	A	A3S	Potri.001G006800	Potri.001G006800(AS) Potri.001G006900(BS) Potri.T170500(BS)	POPTR_0001s04390	sp|Q84MB3|ACCH1_ARATH	1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1	AT3G13610.1	| Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr3:4449448-4450616 FORWARD LENGTH=361	LOC_Os04g49194.1	protein|naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed	IMGA|Medtr5g055680.1	Protein SRG1 chr5 22384306-22387839 F EGN_Mt100125 20111014	GO:0009407|toxin catabolic process GO:0009611|response to wounding GO:0009805|coumarin biosynthetic process GO:0010421|hydrogen peroxide-mediated programmed cell death GO:0010583|response to cyclopentenone GO:0019748|secondary metabolic process GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors GO:0051213|dioxygenase activity	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_00436	B	B2S	Potri.001G006900	Potri.001G006900(BS) Potri.T170500(BS)	POPTR_0001s04410	sp|Q84MB3|ACCH1_ARATH	1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1	AT3G13610.1	| Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr3:4449448-4450616 FORWARD LENGTH=361	LOC_Os01g61610.3	protein|flavonol synthase/flavanone 3-hydroxylase, putative, expressed	IMGA|Medtr5g055680.1	Protein SRG1 chr5 22384306-22387839 F EGN_Mt100125 20111014	GO:0009407|toxin catabolic process GO:0009611|response to wounding GO:0009805|coumarin biosynthetic process GO:0010421|hydrogen peroxide-mediated programmed cell death GO:0010583|response to cyclopentenone GO:0019748|secondary metabolic process GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors GO:0051213|dioxygenase activity	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_00437	A	A1S	Potri.001G007000	Potri.001G007000(AS)	POPTR_0001s04420	sp|Q9LMR5|FK126_ARATH	F-box/kelch-repeat protein At1g15670 OS=Arabidopsis thaliana GN=At1g15670 PE=2 SV=1	AT1G15670.1	| Symbols: | Galactose oxidase/kelch repeat superfamily protein | chr1:5390119-5391198 FORWARD LENGTH=359	LOC_Os06g39370.1	protein|OsFBK16 - F-box domain and kelch repeat containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00438	A	A1S	Potri.001G007100	Potri.001G007100(AS)	POPTR_0001s04430	sp|Q84MB3|ACCH1_ARATH	1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1	AT1G55290.1	| Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr1:20626208-20627397 REVERSE LENGTH=361	LOC_Os01g61610.3	protein|flavonol synthase/flavanone 3-hydroxylase, putative, expressed	IMGA|Medtr5g055680.1	Protein SRG1 chr5 22384306-22387839 F EGN_Mt100125 20111014	GO:0008150|biological_process GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_00439	A	A1S	Potri.001G007200	Potri.001G007200(AS)	POPTR_0001s04440	NA	NA	AT3G13620.1	| Symbols: | Amino acid permease family protein | chr3:4450904-4452556 REVERSE LENGTH=478	LOC_Os03g25920.1	protein|amino acid permease family protein, putative, expressed	IMGA|Medtr5g064750.1	Neutral amino acid transport protein chr5 26211480-26209932 F EGN_Mt100125 20111014	GO:0015846|polyamine transport GO:0016126|sterol biosynthetic process GO:0046520|sphingoid biosynthetic process	GO:0015203|polyamine transmembrane transporter activity GO:0015326|cationic amino acid transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_00440	A	A1S	Potri.001G007300	Potri.001G007300(AS)	POPTR_0001s04450	NA	NA	AT3G13620.1	| Symbols: | Amino acid permease family protein | chr3:4450904-4452556 REVERSE LENGTH=478	LOC_Os03g25920.1	protein|amino acid permease family protein, putative, expressed	IMGA|Medtr5g064750.1	Neutral amino acid transport protein chr5 26211480-26209932 F EGN_Mt100125 20111014	GO:0015846|polyamine transport GO:0016126|sterol biosynthetic process GO:0046520|sphingoid biosynthetic process	GO:0015203|polyamine transmembrane transporter activity GO:0015326|cationic amino acid transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_00441	A	A1S	Potri.001G007400	Potri.001G007400(AS)	POPTR_0001s04460	sp|Q9C8G4|PLY4_ARATH	Probable pectate lyase 4 OS=Arabidopsis thaliana GN=At1g30350 PE=2 SV=1	AT5G09280.1	| Symbols: | Pectin lyase-like superfamily protein | chr5:2880423-2881597 REVERSE LENGTH=297	LOC_Os08g18970.1	protein|pectate lyase family protein, expressed	IMGA|Medtr5g019160.1	Major pollen allergen-like protein chr5 6982688-6984373 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0016829|lyase activity GO:0030570|pectate lyase activity	GO:0005886|plasma membrane
pt2_00442	G	G1	NA	NA	POPTR_0001s04470	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00443	A	A1S	Potri.001G007600	Potri.001G007600(AS)	POPTR_0001s04480	sp|P37273|PSY2_SOLLC	Phytoene synthase 2, chloroplastic (Fragment) OS=Solanum lycopersicum GN=PSY2 PE=2 SV=1	AT5G17230.2	| Symbols: PSY | PHYTOENE SYNTHASE | chr5:5659839-5662087 REVERSE LENGTH=422	LOC_Os12g43130.1	protein|phytoene synthase, chloroplast precursor, putative, expressed	IMGA|contig_85152_1.1	Phytoene synthase protein contig_85152 2290-1403 E PREDN 20111014	GO:0006636|unsaturated fatty acid biosynthetic process GO:0006655|phosphatidylglycerol biosynthetic process GO:0009058|biosynthetic process GO:0015995|chlorophyll biosynthetic process GO:0016117|carotenoid biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway	GO:0016740|transferase activity GO:0016765|transferase activity, transferring alkyl or aryl (other than methyl) groups GO:0016767|geranylgeranyl-diphosphate geranylgeranyltransferase activity GO:0046905|phytoene synthase activity	GO:0009507|chloroplast GO:0010287|plastoglobule
pt2_00444	B	B1S	Potri.001G007700	Potri.001G007700(BS)	POPTR_0001s04490	sp|P53797|PSY_NARPS	Phytoene synthase, chloroplastic OS=Narcissus pseudonarcissus GN=PSY PE=2 SV=1	AT5G17230.2	| Symbols: PSY | PHYTOENE SYNTHASE | chr5:5659839-5662087 REVERSE LENGTH=422	LOC_Os06g51290.2	protein|phytoene synthase, chloroplast precursor, putative, expressed	IMGA|Medtr5g076620.1	Phytoene synthase chr5 31690087-31686764 F EGN_Mt100125 20111014	GO:0006636|unsaturated fatty acid biosynthetic process GO:0006655|phosphatidylglycerol biosynthetic process GO:0009058|biosynthetic process GO:0015995|chlorophyll biosynthetic process GO:0016117|carotenoid biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway	GO:0016740|transferase activity GO:0016765|transferase activity, transferring alkyl or aryl (other than methyl) groups GO:0016767|geranylgeranyl-diphosphate geranylgeranyltransferase activity GO:0046905|phytoene synthase activity	GO:0009507|chloroplast GO:0010287|plastoglobule
pt2_00445	A	A1S	Potri.001G007800	Potri.001G007800(AS)	POPTR_0001s04500	sp|Q07100|PP2A4_ARATH	Serine/threonine-protein phosphatase PP2A-4 catalytic subunit OS=Arabidopsis thaliana GN=PP2A4 PE=2 SV=2	AT2G42500.1	| Symbols: PP2A-3 | protein phosphatase 2A-3 | chr2:17698099-17701226 REVERSE LENGTH=313	LOC_Os03g59060.2	protein|OsPP2Ac-2 - Phosphatase 2A isoform 2 belonging to family 2, expressed	IMGA|Medtr5g037200.1	Serine/threonine protein phosphatase chr5 15803326-15807834 F EGN_Mt100125 20111014	NA	GO:0004722|protein serine/threonine phosphatase activity GO:0016787|hydrolase activity	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane
pt2_00446	A	A1S	Potri.001G007900	Potri.001G007900(AS)	POPTR_0001s04510	sp|Q84W89|RH37_ARATH	DEAD-box ATP-dependent RNA helicase 37 OS=Arabidopsis thaliana GN=RH37 PE=2 SV=2	AT2G42520.1	| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr2:17705382-17708744 FORWARD LENGTH=633	LOC_Os03g59050.1	protein|DEAD-box ATP-dependent RNA helicase, putative, expressed	IMGA|contig_74166_1.1	ATP dependent RNA helicase contig_74166 1-4555 F PREDN 20111014	NA	GO:0003676|nucleic acid binding GO:0004386|helicase activity GO:0005524|ATP binding GO:0008026|ATP-dependent helicase activity	GO:0005777|peroxisome
pt2_00447	A	A2S	Potri.001G008000	Potri.001G008000(AS) Potri.003G217700(DS)	POPTR_0001s04520	sp|Q93W93|FBK22_ARATH	F-box/kelch-repeat protein At1g55270 OS=Arabidopsis thaliana GN=At1g55270 PE=2 SV=1	AT1G55270.1	| Symbols: | Galactose oxidase/kelch repeat superfamily protein | chr1:20618333-20619925 REVERSE LENGTH=434	LOC_Os10g26990.1	protein|OsFBK23 - F-box domain and kelch repeat containing protein, expressed	IMGA|Medtr5g039390.1	F-box/kelch-repeat protein SKIP11 chr5 16927948-16931013 F EGN_Mt100125 20111014	NA	GO:0003674|molecular_function	GO:0005737|cytoplasm
pt2_00448	A	A2S	Potri.001G008000	Potri.001G008000(AS) Potri.T156800(AS)	POPTR_0001s04530	sp|Q93W93|FBK22_ARATH	F-box/kelch-repeat protein At1g55270 OS=Arabidopsis thaliana GN=At1g55270 PE=2 SV=1	AT1G55270.1	| Symbols: | Galactose oxidase/kelch repeat superfamily protein | chr1:20618333-20619925 REVERSE LENGTH=434	LOC_Os10g26990.1	protein|OsFBK23 - F-box domain and kelch repeat containing protein, expressed	IMGA|Medtr5g039390.1	F-box/kelch-repeat protein SKIP11 chr5 16927948-16931013 F EGN_Mt100125 20111014	NA	GO:0003674|molecular_function	GO:0005737|cytoplasm
pt2_00449	A	A2S	Potri.001G008100	Potri.001G008100(AS) Potri.T156900(AS)	POPTR_0001s04540	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process GO:0030003|cellular cation homeostasis GO:0070838|divalent metal ion transport	GO:0003674|molecular_function	NA
pt2_00450	A	A2S	Potri.001G008200	Potri.001G008200(AS) Potri.T157000(BS)	POPTR_0001s04550	NA	NA	NA	NA	NA	NA	NA	NA	GO:0009737|response to abscisic acid stimulus	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_00451	A	A3S	Potri.T157100	Potri.T157100(AS) Potri.001G008300(AS) Potri.003G217300(DS)	POPTR_0001s04560	NA	NA	AT1G55265.1	| Symbols: | Protein of unknown function, DUF538 | chr1:20617326-20617853 FORWARD LENGTH=175	LOC_Os03g48626.1	protein|expressed protein	IMGA|contig_24614_1.1	Unknown protein contig_24614 653-186 H PREDN 20111014	GO:0008150|biological_process	NA	GO:0005576|extracellular region GO:0005773|vacuole
pt2_00452	A	A1S	Potri.T157400	Potri.T157400(AS)	POPTR_0001s04570	NA	NA	AT1G55265.1	| Symbols: | Protein of unknown function, DUF538 | chr1:20617326-20617853 FORWARD LENGTH=175	LOC_Os03g48626.1	protein|expressed protein	IMGA|contig_24614_1.1	Unknown protein contig_24614 653-186 H PREDN 20111014	GO:0008150|biological_process	NA	GO:0005576|extracellular region GO:0005773|vacuole
pt2_00453	A	A1S	Potri.001G008400	Potri.001G008400(AS)	POPTR_0001s04580	NA	NA	AT5G19860.1	| Symbols: | Protein of unknown function, DUF538 | chr5:6714533-6715837 REVERSE LENGTH=181	LOC_Os03g48710.1	protein|expressed protein	IMGA|contig_24614_1.1	Unknown protein contig_24614 653-186 H PREDN 20111014	GO:0008150|biological_process	NA	GO:0005773|vacuole GO:0009507|chloroplast
pt2_00454	A	A1S	Potri.001G008400	Potri.001G008400(AS)	POPTR_0001s04580	NA	NA	AT5G19860.1	| Symbols: | Protein of unknown function, DUF538 | chr5:6714533-6715837 REVERSE LENGTH=181	LOC_Os03g48710.1	protein|expressed protein	IMGA|contig_24614_1.1	Unknown protein contig_24614 653-186 H PREDN 20111014	GO:0008150|biological_process	NA	GO:0005773|vacuole GO:0009507|chloroplast
pt2_00455	A	A2S	Potri.001G008400	Potri.001G008400(AS) Potri.003G217200(DS)	POPTR_0001s04580	NA	NA	AT5G19860.1	| Symbols: | Protein of unknown function, DUF538 | chr5:6714533-6715837 REVERSE LENGTH=181	LOC_Os03g48710.1	protein|expressed protein	IMGA|contig_24614_1.1	Unknown protein contig_24614 653-186 H PREDN 20111014	GO:0008150|biological_process	NA	GO:0005773|vacuole GO:0009507|chloroplast
pt2_00456	A	A1S	Potri.001G008500	Potri.001G008500(AS)	POPTR_0001s04590	NA	NA	AT2G44290.1	| Symbols: | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr2:18305418-18306202 REVERSE LENGTH=205	LOC_Os03g07100.1	protein|LTPL82 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	IMGA|contig_179832_1.1	Non-specific lipid-transfer protein contig_179832 1008-250 H PREDN 20111014	GO:0000038|very long-chain fatty acid metabolic process GO:0006869|lipid transport GO:0009664|plant-type cell wall organization GO:0019344|cysteine biosynthetic process GO:0042335|cuticle development	GO:0008289|lipid binding	GO:0005634|nucleus GO:0005886|plasma membrane GO:0031225|anchored to membrane
pt2_00457	A	A1S	Potri.001G008600	Potri.001G008600(AS)	POPTR_0001s04600	NA	NA	AT1G11880.1	| Symbols: | transferases, transferring hexosyl groups | chr1:4007909-4010327 REVERSE LENGTH=489	LOC_Os12g31480.1	protein|GPI mannosyltransferase 2, putative, expressed	NA	NA	GO:0006506|GPI anchor biosynthetic process	GO:0016758|transferase activity, transferring hexosyl groups	GO:0005789|endoplasmic reticulum membrane GO:0016021|integral to membrane
pt2_00458	A	A2S	Potri.001G008700	Potri.001G008700(AS) Potri.001G008800(AA)	POPTR_0001s04610	sp|Q54BM5|BBP_DICDI	Branchpoint-bridging protein OS=Dictyostelium discoideum GN=sf1 PE=3 SV=1	AT3G32940.1	| Symbols: | RNA-binding KH domain-containing protein | chr3:13491089-13493630 REVERSE LENGTH=607	LOC_Os08g01070.2	protein|retrotransposon protein, putative, unclassified, expressed	NA	NA	NA	GO:0003723|RNA binding	GO:0005634|nucleus
pt2_00459	A	A1S	Potri.001G008800	Potri.001G008800(AS)	POPTR_0001s04620	sp|Q9C895|BRE1B_ARATH	E3 ubiquitin-protein ligase BRE1-like 2 OS=Arabidopsis thaliana GN=HUB2 PE=1 SV=2	AT1G55250.3	| Symbols: HUB2 | histone mono-ubiquitination 2 | chr1:20607214-20612302 FORWARD LENGTH=899	LOC_Os10g41590.1	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr5g084990.1	E3 ubiquitin-protein ligase BRE1-like protein chr5 35650986-35646385 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0007346|regulation of mitotic cell cycle GO:0009965|leaf morphogenesis GO:0010162|seed dormancy process GO:0010228|vegetative to reproductive phase transition of meristem GO:0010390|histone monoubiquitination GO:0033523|histone H2B ubiquitination GO:0043687|post-translational protein modification GO:0045893|positive regulation of transcription, DNA-dependent	GO:0008270|zinc ion binding GO:0042803|protein homodimerization activity	GO:0005634|nucleus
pt2_00460	A	A1S	Potri.001G008900	Potri.001G008900(AS)	POPTR_0001s04630	NA	NA	AT1G55230.1	| Symbols: | Family of unknown function (DUF716) | chr1:20602895-20603797 FORWARD LENGTH=300	LOC_Os09g27260.1	protein|plant viral response family protein, putative, expressed	IMGA|Medtr5g027180.1	Transmembrane protein 45B chr5 11024450-11020755 E EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0009507|chloroplast
pt2_00461	B	B1S	Potri.001G009000	Potri.001G009000(BS)	POPTR_0001s04640	NA	NA	AT1G55230.1	| Symbols: | Family of unknown function (DUF716) | chr1:20602895-20603797 FORWARD LENGTH=300	LOC_Os09g27260.1	protein|plant viral response family protein, putative, expressed	IMGA|Medtr5g027180.1	Transmembrane protein 45B chr5 11024450-11020755 E EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0009507|chloroplast
pt2_00462	A	A1S	Potri.001G009100	Potri.001G009100(AS)	POPTR_0001s04650	NA	NA	AT1G58170.1	| Symbols: | Disease resistance-responsive (dirigent-like protein) family protein | chr1:21536188-21536745 FORWARD LENGTH=185	LOC_Os12g07580.1	protein|dirigent, putative, expressed	IMGA|Medtr5g096120.1	Disease resistance response protein chr5 40986916-40987485 H EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0006952|defense response GO:0009807|lignan biosynthetic process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_00463	A	A1S	Potri.001G009200	Potri.001G009200(AS)	POPTR_0001s04660	NA	NA	AT5G19875.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G31940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:6718412-6718783 FORWARD LENGTH=123	NA	NA	IMGA|Medtr5g084240.1	hypothetical protein chr5 35343399-35342214 F EGN_Mt100125 20111014	GO:0006979|response to oxidative stress	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_00464	A	A1S	Potri.001G009300	Potri.001G009300(AS)	POPTR_0001s04670	NA	NA	NA	NA	NA	NA	IMGA|Medtr5g084250.1	hypothetical protein chr5 35344101-35343476 F EGN_Mt100125 20111014	GO:0006979|response to oxidative stress	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_00465	A	A1S	Potri.001G009400	Potri.001G009400(AS)	POPTR_0001s04680	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00466	A	A1S	Potri.001G009500	Potri.001G009500(AS)	POPTR_0001s04690	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00467	A	A1S	Potri.001G009600	Potri.001G009600(AS)	POPTR_0001s04700	sp|Q94F88|CMT3_ARATH	DNA (cytosine-5)-methyltransferase CMT3 OS=Arabidopsis thaliana GN=CMT3 PE=1 SV=2	AT1G69770.1	| Symbols: CMT3 | chromomethylase 3 | chr1:26248496-26253519 REVERSE LENGTH=839	LOC_Os03g12570.1	protein|expressed protein	IMGA|Medtr5g023660.1	DNA (cytosine-5)-methyltransferase chr5 9137935-9132120 E EGN_Mt100125 20111014	GO:0006260|DNA replication GO:0006261|DNA-dependent DNA replication GO:0006270|DNA replication initiation GO:0006275|regulation of DNA replication GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0006346|methylation-dependent chromatin silencing GO:0008283|cell proliferation GO:0009909|regulation of flower development GO:0010069|zygote asymmetric cytokinesis in embryo sac GO:0010425|DNA methylation on cytosine within a CNG sequence GO:0016458|gene silencing GO:0016572|histone phosphorylation GO:0031047|gene silencing by RNA GO:0031048|chromatin silencing by small RNA GO:0034968|histone lysine methylation GO:0045814|negative regulation of gene expression, epigenetic GO:0051567|histone H3-K9 methylation GO:0051726|regulation of cell cycle	GO:0003677|DNA binding GO:0003886|DNA (cytosine-5-)-methyltransferase activity	GO:0005634|nucleus
pt2_00468	A	A1S	Potri.001G009700	Potri.001G009700(AS)	POPTR_0001s04710	sp|Q6QNM1|KC1_TOXGO	Casein kinase I OS=Toxoplasma gondii PE=2 SV=1	AT3G13670.1	| Symbols: | Protein kinase family protein | chr3:4469434-4473234 FORWARD LENGTH=703	LOC_Os05g11140.2	protein|CK1_CaseinKinase_1a.5 - CK1 includes the casein kinase 1 kinases, expressed	IMGA|Medtr1g042430.1	Casein kinase chr1 12130628-12134366 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006487|protein N-linked glycosylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus
pt2_00469	A	A1S	Potri.001G009800	Potri.001G009800(AS)	POPTR_0001s04720	NA	NA	AT2G34860.2	| Symbols: EDA3 | DnaJ/Hsp40 cysteine-rich domain superfamily protein | chr2:14708380-14709804 FORWARD LENGTH=186	LOC_Os08g36140.1	protein|expressed protein	IMGA|Medtr1g116170.2	DnaJ-like zinc-finger protein chr1 33730130-33728687 F EGN_Mt100125 20111014	GO:0006098|pentose-phosphate shunt GO:0009561|megagametogenesis GO:0009902|chloroplast relocation GO:0010027|thylakoid membrane organization GO:0010304|PSII associated light-harvesting complex II catabolic process GO:0015995|chlorophyll biosynthetic process GO:0016117|carotenoid biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019684|photosynthesis, light reaction GO:0034660|ncRNA metabolic process GO:0035304|regulation of protein dephosphorylation GO:0042793|transcription from plastid promoter	GO:0031072|heat shock protein binding GO:0051082|unfolded protein binding	GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane
pt2_00470	A	A1S	Potri.001G009800	Potri.001G009800(AS)	POPTR_0001s04720	NA	NA	AT2G34860.2	| Symbols: EDA3 | DnaJ/Hsp40 cysteine-rich domain superfamily protein | chr2:14708380-14709804 FORWARD LENGTH=186	LOC_Os08g36140.1	protein|expressed protein	IMGA|Medtr1g116170.2	DnaJ-like zinc-finger protein chr1 33730130-33728687 F EGN_Mt100125 20111014	GO:0006098|pentose-phosphate shunt GO:0009561|megagametogenesis GO:0009902|chloroplast relocation GO:0010027|thylakoid membrane organization GO:0010304|PSII associated light-harvesting complex II catabolic process GO:0015995|chlorophyll biosynthetic process GO:0016117|carotenoid biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019684|photosynthesis, light reaction GO:0034660|ncRNA metabolic process GO:0035304|regulation of protein dephosphorylation GO:0042793|transcription from plastid promoter	GO:0031072|heat shock protein binding GO:0051082|unfolded protein binding	GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane
pt2_00471	A	A1S	Potri.001G009900	Potri.001G009900(AS)	POPTR_0001s04730	sp|Q10PP8|MTP4_ORYSJ	Metal tolerance protein 4 OS=Oryza sativa subsp. japonica GN=MTP4 PE=2 SV=1	AT3G58060.1	| Symbols: | Cation efflux family protein | chr3:21497778-21499676 REVERSE LENGTH=411	LOC_Os03g12530.1	protein|cation efflux family protein, putative, expressed	IMGA|Medtr5g075680.1	Metal tolerance protein chr5 31209167-31206642 E EGN_Mt100125 20111014	GO:0006812|cation transport GO:0055085|transmembrane transport	GO:0008324|cation transmembrane transporter activity GO:0015562|efflux transmembrane transporter activity	GO:0005634|nucleus GO:0016020|membrane GO:0016021|integral to membrane
pt2_00472	A	A3S	Potri.001G010000	Potri.001G010000(AS) Potri.001G010100(BS) Potri.001G010200(BS)	POPTR_0001s04740	sp|Q10PP8|MTP4_ORYSJ	Metal tolerance protein 4 OS=Oryza sativa subsp. japonica GN=MTP4 PE=2 SV=1	AT3G58060.1	| Symbols: | Cation efflux family protein | chr3:21497778-21499676 REVERSE LENGTH=411	LOC_Os03g12530.1	protein|cation efflux family protein, putative, expressed	IMGA|Medtr5g075680.1	Metal tolerance protein chr5 31209167-31206642 E EGN_Mt100125 20111014	GO:0006812|cation transport GO:0055085|transmembrane transport	GO:0008324|cation transmembrane transporter activity GO:0015562|efflux transmembrane transporter activity	GO:0005634|nucleus GO:0016020|membrane GO:0016021|integral to membrane
pt2_00473	B	B1S	Potri.001G010300	Potri.001G010300(BS)	POPTR_0001s04750	sp|Q10PP8|MTP4_ORYSJ	Metal tolerance protein 4 OS=Oryza sativa subsp. japonica GN=MTP4 PE=2 SV=1	AT3G58060.1	| Symbols: | Cation efflux family protein | chr3:21497778-21499676 REVERSE LENGTH=411	LOC_Os03g12530.1	protein|cation efflux family protein, putative, expressed	IMGA|Medtr5g075680.1	Metal tolerance protein chr5 31209167-31206642 E EGN_Mt100125 20111014	GO:0006812|cation transport GO:0055085|transmembrane transport	GO:0008324|cation transmembrane transporter activity GO:0015562|efflux transmembrane transporter activity	GO:0005634|nucleus GO:0016020|membrane GO:0016021|integral to membrane
pt2_00474	A	A1S	Potri.001G010400	Potri.001G010400(AS)	POPTR_0001s04760	sp|P54453|YQEH_BACSU	Uncharacterized protein yqeH OS=Bacillus subtilis (strain 168) GN=yqeH PE=1 SV=1	AT4G10620.1	| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr4:6564297-6566402 FORWARD LENGTH=597	LOC_Os09g19980.1	protein|GTP binding protein, putative, expressed	NA	NA	GO:0008150|biological_process GO:0042991|transcription factor import into nucleus	GO:0005525|GTP binding	GO:0005634|nucleus
pt2_00475	A	A1S	Potri.001G010500	Potri.001G010500(AS)	POPTR_0001s04770	sp|Q9M2P4|SINA2_ARATH	E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana GN=SINAT2 PE=2 SV=1	AT3G58040.1	| Symbols: SINAT2 | seven in absentia of Arabidopsis 2 | chr3:21489612-21491085 FORWARD LENGTH=308	LOC_Os02g03620.1	protein|seven in absentia protein family domain containing protein, expressed	IMGA|Medtr5g067400.1	Ubiquitin chr5 27493316-27494987 H EGN_Mt100125 20111014	GO:0006511|ubiquitin-dependent protein catabolic process GO:0007275|multicellular organismal development GO:0016567|protein ubiquitination	GO:0004842|ubiquitin-protein ligase activity GO:0005515|protein binding GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_00476	A	A1S	Potri.001G010600	Potri.001G010600(AS)	POPTR_0001s04780	NA	NA	AT2G31945.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G05575.1); Has 61 Blast hits to 61 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:13581691-13581978 FORWARD LENGTH=95	NA	NA	NA	NA	GO:0008150|biological_process GO:0009407|toxin catabolic process GO:0009693|ethylene biosynthetic process GO:0010583|response to cyclopentenone	GO:0003674|molecular_function	NA
pt2_00477	A	A1S	Potri.001G010700	Potri.001G010700(AS)	POPTR_0001s04790	sp|Q54WW7|Y0010_DICDI	Probable serine/threonine-protein kinase DDB_G0279405 OS=Dictyostelium discoideum GN=DDB_G0279405 PE=3 SV=1	AT3G45240.2	| Symbols: GRIK1 | geminivirus rep interacting kinase 1 | chr3:16570774-16572902 REVERSE LENGTH=396	LOC_Os03g50330.1	protein|CAMK_KIN1/SNF1/Nim1_like.18 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	IMGA|Medtr5g075100.1	CBL-interacting protein kinase chr5 30905699-30903734 F EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus
pt2_00478	A	A2S	Potri.001G010800	Potri.001G010800(AS) Potri.003G215100(DS)	POPTR_0001s04800	sp|Q9SPK5|FTHS_ARATH	Formate--tetrahydrofolate ligase OS=Arabidopsis thaliana GN=THFS PE=1 SV=1	AT1G50480.1	| Symbols: THFS | 10-formyltetrahydrofolate synthetase | chr1:18702064-18704687 FORWARD LENGTH=634	LOC_Os09g27420.1	protein|formate--tetrahydrofolate ligase, putative, expressed	IMGA|Medtr5g059390.1	Formate-tetrahydrofolate ligase chr5 23881433-23885633 H EGN_Mt100125 20111014	GO:0009396|folic acid-containing compound biosynthetic process GO:0046686|response to cadmium ion	GO:0004329|formate-tetrahydrofolate ligase activity GO:0005507|copper ion binding GO:0005524|ATP binding	GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane GO:0009507|chloroplast GO:0048046|apoplast
pt2_00479	B	B2S	Potri.001G010800	Potri.001G010800(BS) Potri.003G215100(DS)	POPTR_0001s04800	sp|Q9SPK5|FTHS_ARATH	Formate--tetrahydrofolate ligase OS=Arabidopsis thaliana GN=THFS PE=1 SV=1	AT1G50480.1	| Symbols: THFS | 10-formyltetrahydrofolate synthetase | chr1:18702064-18704687 FORWARD LENGTH=634	LOC_Os09g27420.1	protein|formate--tetrahydrofolate ligase, putative, expressed	IMGA|Medtr5g059390.1	Formate-tetrahydrofolate ligase chr5 23881433-23885633 H EGN_Mt100125 20111014	GO:0009396|folic acid-containing compound biosynthetic process GO:0046686|response to cadmium ion	GO:0004329|formate-tetrahydrofolate ligase activity GO:0005507|copper ion binding GO:0005524|ATP binding	GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane GO:0009507|chloroplast GO:0048046|apoplast
pt2_00480	A	A2S	Potri.001G010800	Potri.001G010800(AS) Potri.003G215100(DS)	POPTR_0001s04800	sp|Q9SPK5|FTHS_ARATH	Formate--tetrahydrofolate ligase OS=Arabidopsis thaliana GN=THFS PE=1 SV=1	AT1G50480.1	| Symbols: THFS | 10-formyltetrahydrofolate synthetase | chr1:18702064-18704687 FORWARD LENGTH=634	LOC_Os09g27420.1	protein|formate--tetrahydrofolate ligase, putative, expressed	IMGA|Medtr5g059390.1	Formate-tetrahydrofolate ligase chr5 23881433-23885633 H EGN_Mt100125 20111014	GO:0009396|folic acid-containing compound biosynthetic process GO:0046686|response to cadmium ion	GO:0004329|formate-tetrahydrofolate ligase activity GO:0005507|copper ion binding GO:0005524|ATP binding	GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane GO:0009507|chloroplast GO:0048046|apoplast
pt2_00481	A	A1S	Potri.001G010900	Potri.001G010900(AS)	POPTR_0001s04810	NA	NA	AT5G06700.1	| Symbols: TBR | Plant protein of unknown function (DUF828) | chr5:2063638-2065810 FORWARD LENGTH=608	LOC_Os06g10560.1	protein|leaf senescence related protein, putative, expressed	IMGA|Medtr5g059400.1	hypothetical protein chr5 23887742-23890576 H EGN_Mt100125 20111014	GO:0009827|plant-type cell wall modification GO:0030244|cellulose biosynthetic process GO:0045489|pectin biosynthetic process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_00482	A	A2S	Potri.001G011000	Potri.001G011000(AS) Potri.001G011300(DS)	POPTR_0001s04820	sp|P00433|PER1A_ARMRU	Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE=1 SV=2	AT3G49120.1	| Symbols: ATPERX34, PERX34, PRXCB, ATPCB, PRX34 | peroxidase CB | chr3:18207819-18210041 FORWARD LENGTH=353	LOC_Os03g13200.1	protein|peroxidase precursor, putative, expressed	IMGA|Medtr5g017850.1	Peroxidase chr5 6345400-6343739 E EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0006952|defense response GO:0006979|response to oxidative stress GO:0009416|response to light stimulus GO:0009615|response to virus GO:0009723|response to ethylene stimulus GO:0009826|unidimensional cell growth GO:0042742|defense response to bacterium GO:0050832|defense response to fungus GO:0052033|pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response GO:0055114|oxidation-reduction process GO:0072593|reactive oxygen species metabolic process	GO:0004601|peroxidase activity GO:0020037|heme binding	GO:0005576|extracellular region GO:0005618|cell wall GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0009505|plant-type cell wall GO:0048046|apoplast
pt2_00483	A	A1S	Potri.001G011100	Potri.001G011100(AS)	POPTR_0001s04830	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00484	A	A3S	Potri.001G011200	Potri.001G011200(AS) Potri.001G011000(DS) Potri.001G011300(DS)	POPTR_0001s04840	sp|P00433|PER1A_ARMRU	Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE=1 SV=2	AT3G49120.1	| Symbols: ATPERX34, PERX34, PRXCB, ATPCB, PRX34 | peroxidase CB | chr3:18207819-18210041 FORWARD LENGTH=353	LOC_Os03g13200.1	protein|peroxidase precursor, putative, expressed	IMGA|Medtr5g021060.2	Peroxidase chr5 7821272-7822903 F EGN_Mt100125 20111014	GO:0006952|defense response GO:0009416|response to light stimulus GO:0009826|unidimensional cell growth GO:0042742|defense response to bacterium GO:0050832|defense response to fungus GO:0052033|pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response GO:0072593|reactive oxygen species metabolic process	GO:0004601|peroxidase activity GO:0020037|heme binding	GO:0005576|extracellular region GO:0005618|cell wall GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0009505|plant-type cell wall GO:0048046|apoplast
pt2_00485	A	A3S	Potri.001G011300	Potri.001G011300(AS) Potri.001G011000(BS) Potri.001G011200(DS)	POPTR_0001s04850	sp|P00433|PER1A_ARMRU	Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE=1 SV=2	AT3G49120.1	| Symbols: ATPERX34, PERX34, PRXCB, ATPCB, PRX34 | peroxidase CB | chr3:18207819-18210041 FORWARD LENGTH=353	LOC_Os03g13200.1	protein|peroxidase precursor, putative, expressed	IMGA|Medtr5g017850.1	Peroxidase chr5 6345400-6343739 E EGN_Mt100125 20111014	GO:0006952|defense response GO:0009416|response to light stimulus GO:0009826|unidimensional cell growth GO:0042742|defense response to bacterium GO:0050832|defense response to fungus GO:0052033|pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response GO:0072593|reactive oxygen species metabolic process	GO:0004601|peroxidase activity GO:0020037|heme binding	GO:0005576|extracellular region GO:0005618|cell wall GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0009505|plant-type cell wall GO:0048046|apoplast
pt2_00486	C	C1S	Potri.001G011400	Potri.001G011400(CS)	sp|O80912|PER23_ARATH	Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=2 SV=1	AT2G38390.1	| Symbols: | Peroxidase superfamily protein | chr2:16079726-16081381 FORWARD LENGTH=349	LOC_Os11g02100.1	protein|peroxidase precursor, putative, expressed	IMGA|Medtr5g017850.1	Peroxidase chr5 6345400-6343739 E EGN_Mt100125 20111014	GO:0006979|response to oxidative stress GO:0055114|oxidation-reduction process	GO:0004601|peroxidase activity GO:0020037|heme binding	GO:0005576|extracellular region GO:0005774|vacuolar membrane
pt2_00487	A	A1S	Potri.001G011500	Potri.001G011500(AS)	POPTR_0001s04870	sp|Q9LEH3|PER15_IPOBA	Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1	AT5G06720.1	| Symbols: ATPA2, PA2 | peroxidase 2 | chr5:2077567-2078857 REVERSE LENGTH=335	LOC_Os03g13200.1	protein|peroxidase precursor, putative, expressed	IMGA|Medtr5g074970.1	Peroxidase chr5 30853893-30857597 F EGN_Mt100125 20111014	GO:0002215|defense response to nematode GO:0006979|response to oxidative stress GO:0009908|flower development GO:0055114|oxidation-reduction process	GO:0004601|peroxidase activity GO:0020037|heme binding	GO:0005576|extracellular region GO:0005794|Golgi apparatus
pt2_00488	R	R	NA	NA	POPTR_0001s04875	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00489	C	C1S	Potri.001G011600	Potri.001G011600(CS)	sp|Q42517|PERN_ARMRU	Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 SV=1	AT5G19890.1	| Symbols: | Peroxidase superfamily protein | chr5:6724372-6725877 REVERSE LENGTH=328	NA	NA	NA	NA	GO:0006979|response to oxidative stress GO:0055114|oxidation-reduction process	GO:0004601|peroxidase activity GO:0020037|heme binding	GO:0005576|extracellular region GO:0005634|nucleus GO:0005737|cytoplasm
pt2_00490	B	B1S	Potri.001G011700	Potri.001G011700(BS)	POPTR_0001s04900	sp|Q8LAP6|PAP12_ARATH	Probable plastid-lipid-associated protein 12, chloroplastic OS=Arabidopsis thaliana GN=PAP12 PE=2 SV=1	AT1G51110.1	| Symbols: | Plastid-lipid associated protein PAP / fibrillin family protein | chr1:18935380-18937484 FORWARD LENGTH=409	LOC_Os07g28790.1	protein|PAP fibrillin family domain containing protein, expressed	IMGA|Medtr1g116320.1	hypothetical protein chr1 33794029-33790925 F EGN_Mt100125 20111014	GO:0000162|tryptophan biosynthetic process GO:0006098|pentose-phosphate shunt GO:0010027|thylakoid membrane organization	GO:0005198|structural molecule activity	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009941|chloroplast envelope GO:0016020|membrane
pt2_00491	A	A1A	Potri.001G011800	Potri.001G011800(AA)	POPTR_0001s04910	NA	NA	AT5G19900.1	| Symbols: | PRLI-interacting factor, putative | chr5:6728561-6730045 REVERSE LENGTH=494	LOC_Os02g58570.1	protein|PRLI-interacting factor A, putative, expressed	IMGA|Medtr1g116330.1	PRLI-interacting factor A chr1 33798868-33796852 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00492	A	A1S	Potri.001G011800	Potri.001G011800(AS)	POPTR_0001s04920	NA	NA	AT5G19900.1	| Symbols: | PRLI-interacting factor, putative | chr5:6728561-6730045 REVERSE LENGTH=494	LOC_Os02g58570.1	protein|PRLI-interacting factor A, putative, expressed	IMGA|Medtr1g116330.1	PRLI-interacting factor A chr1 33798868-33796852 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00493	A	A1S	Potri.001G011900	Potri.001G011900(AS)	POPTR_0001s04940	sp|Q9SFU6|CALS9_ARATH	Callose synthase 9 OS=Arabidopsis thaliana GN=CALS9 PE=2 SV=2	AT3G07160.1	| Symbols: ATGSL10, gsl10, CALS9 | glucan synthase-like 10 | chr3:2265142-2279383 REVERSE LENGTH=1890	LOC_Os06g08380.1	protein|1,3-beta-glucan synthase component domain containing protein, expressed	IMGA|AC235753_1023.1	Callose synthase AC235753.2 124305-113042 E EGN_Mt100125 20111014	GO:0006075|(1->3)-beta-D-glucan biosynthetic process GO:0006606|protein import into nucleus GO:0006944|cellular membrane fusion GO:0009555|pollen development GO:0009556|microsporogenesis GO:0009846|pollen germination GO:0048589|developmental growth GO:0052543|callose deposition in cell wall GO:0055047|generative cell mitosis GO:0080092|regulation of pollen tube growth	GO:0003843|1,3-beta-D-glucan synthase activity	GO:0000148|1,3-beta-D-glucan synthase complex GO:0005794|Golgi apparatus GO:0005886|plasma membrane
pt2_00494	A	A1S	Potri.001G012000	Potri.001G012000(AS)	POPTR_0001s04950	sp|Q9SFU6|CALS9_ARATH	Callose synthase 9 OS=Arabidopsis thaliana GN=CALS9 PE=2 SV=2	AT3G07160.1	| Symbols: ATGSL10, gsl10, CALS9 | glucan synthase-like 10 | chr3:2265142-2279383 REVERSE LENGTH=1890	LOC_Os06g51270.1	protein|1,3-beta-glucan synthase component domain containing protein, expressed	IMGA|Medtr1g116450.1	Callose synthase chr1 33858802-33875517 E EGN_Mt100125 20111014	GO:0006075|(1->3)-beta-D-glucan biosynthetic process GO:0006606|protein import into nucleus GO:0006944|cellular membrane fusion GO:0009555|pollen development GO:0009556|microsporogenesis GO:0009846|pollen germination GO:0048589|developmental growth GO:0052543|callose deposition in cell wall GO:0055047|generative cell mitosis GO:0080092|regulation of pollen tube growth	GO:0003843|1,3-beta-D-glucan synthase activity	GO:0000148|1,3-beta-D-glucan synthase complex GO:0005794|Golgi apparatus GO:0005886|plasma membrane
pt2_00495	A	A1S	Potri.001G012100	Potri.001G012100(AS)	POPTR_0001s04960	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00496	A	A1S	Potri.001G012200	Potri.001G012200(AS)	POPTR_0001s04970	sp|Q9LXT9|CALS3_ARATH	Callose synthase 3 OS=Arabidopsis thaliana GN=CALS3 PE=2 SV=3	AT5G13000.1	| Symbols: ATGSL12, gsl12 | glucan synthase-like 12 | chr5:4110445-4121202 REVERSE LENGTH=1955	LOC_Os03g03610.1	protein|1,3-beta-glucan synthase component domain containing protein, expressed	IMGA|AC235753_1023.1	Callose synthase AC235753.2 124305-113042 E EGN_Mt100125 20111014	GO:0000226|microtubule cytoskeleton organization GO:0006075|(1->3)-beta-D-glucan biosynthetic process GO:0006346|methylation-dependent chromatin silencing GO:0006944|cellular membrane fusion GO:0007267|cell-cell signaling GO:0009556|microsporogenesis GO:0009616|virus induced gene silencing GO:0010267|production of ta-siRNAs involved in RNA interference GO:0016246|RNA interference GO:0031048|chromatin silencing by small RNA GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0051567|histone H3-K9 methylation GO:0052543|callose deposition in cell wall	GO:0003843|1,3-beta-D-glucan synthase activity GO:0016757|transferase activity, transferring glycosyl groups	GO:0000148|1,3-beta-D-glucan synthase complex GO:0005886|plasma membrane GO:0016020|membrane
pt2_00497	A	A1S	Potri.001G012300	Potri.001G012300(AS)	POPTR_0001s04980	sp|D1FP53|LIN_MEDTR	Putative E3 ubiquitin-protein ligase LIN OS=Medicago truncatula GN=LIN PE=2 SV=1	AT5G42340.1	| Symbols: PUB15 | Plant U-Box 15 | chr5:16928086-16930367 REVERSE LENGTH=660	LOC_Os04g49500.1	protein|U-box domain-containing protein, putative, expressed	IMGA|Medtr1g090320.1	U-box domain-containing protein chr1 24918857-24926483 H EGN_Mt100125 20111014	GO:0006944|cellular membrane fusion GO:0016567|protein ubiquitination GO:0048610|cellular process involved in reproduction GO:0048868|pollen tube development	GO:0004842|ubiquitin-protein ligase activity	GO:0000151|ubiquitin ligase complex GO:0005634|nucleus
pt2_00498	A	A1S	Potri.T180100	Potri.T180100(AS)	POPTR_0001s04990	sp|P48630|FD6E1_SOYBN	Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1 OS=Glycine max GN=FAD2-1 PE=2 SV=1	AT3G12120.2	| Symbols: FAD2 | fatty acid desaturase 2 | chr3:3860592-3861743 REVERSE LENGTH=383	LOC_Os02g48560.6	protein|fatty acid desaturase, putative, expressed	IMGA|Medtr5g071170.1	Omega-3 fatty acid desaturase chr5 29225742-29223460 H EGN_Mt100125 20111014	GO:0006629|lipid metabolic process GO:0055114|oxidation-reduction process	GO:0016717|oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water GO:0016720|delta12-fatty acid dehydrogenase activity GO:0045485|omega-6 fatty acid desaturase activity	GO:0005634|nucleus GO:0005783|endoplasmic reticulum
pt2_00499	C	C1S	Potri.001G012500	Potri.001G012500(CS)	sp|P48630|FD6E1_SOYBN	Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1 OS=Glycine max GN=FAD2-1 PE=2 SV=1	AT3G12120.2	| Symbols: FAD2 | fatty acid desaturase 2 | chr3:3860592-3861743 REVERSE LENGTH=383	LOC_Os02g48560.1	protein|fatty acid desaturase, putative, expressed	IMGA|Medtr5g071170.1	Omega-3 fatty acid desaturase chr5 29225742-29223460 H EGN_Mt100125 20111014	GO:0006629|lipid metabolic process GO:0055114|oxidation-reduction process	GO:0016717|oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water GO:0016720|delta12-fatty acid dehydrogenase activity GO:0045485|omega-6 fatty acid desaturase activity	GO:0005634|nucleus GO:0005783|endoplasmic reticulum
pt2_00500	A	A1S	Potri.001G012600	Potri.001G012600(AS)	POPTR_0001s05010	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00501	A	A1S	Potri.001G012700	Potri.001G012700(AS)	POPTR_0001s05020	sp|P48630|FD6E1_SOYBN	Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1 OS=Glycine max GN=FAD2-1 PE=2 SV=1	AT3G12120.2	| Symbols: FAD2 | fatty acid desaturase 2 | chr3:3860592-3861743 REVERSE LENGTH=383	LOC_Os02g48560.2	protein|fatty acid desaturase, putative, expressed	IMGA|Medtr5g071170.1	Omega-3 fatty acid desaturase chr5 29225742-29223460 H EGN_Mt100125 20111014	GO:0006629|lipid metabolic process GO:0055114|oxidation-reduction process	GO:0016717|oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water GO:0016720|delta12-fatty acid dehydrogenase activity GO:0045485|omega-6 fatty acid desaturase activity	GO:0005634|nucleus GO:0005783|endoplasmic reticulum
pt2_00502	A	A1S	Potri.001G012800	Potri.001G012800(AS)	POPTR_0001s05030	sp|Q9ZPV5|NOC2L_ARATH	Nucleolar complex protein 2 homolog OS=Arabidopsis thaliana GN=At2g18220 PE=2 SV=2	AT2G18220.1	| Symbols: | Noc2p family | chr2:7928254-7931851 FORWARD LENGTH=764	LOC_Os10g35280.1	protein|nucleolar complex protein 2, putative, expressed	IMGA|Medtr1g110560.1	Nucleolar complex protein-like protein chr1 32623544-32617867 E EGN_Mt100125 20111014	GO:0008150|biological_process GO:0009220|pyrimidine ribonucleotide biosynthetic process GO:0042991|transcription factor import into nucleus	NA	GO:0005634|nucleus GO:0005829|cytosol
pt2_00503	A	A1S	Potri.001G012900	Potri.001G012900(AS)	POPTR_0001s05040	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00504	A	A1S	Potri.001G013000	Potri.001G013000(AS)	POPTR_0001s05050	sp|P00433|PER1A_ARMRU	Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE=1 SV=2	AT3G49110.1	| Symbols: PRX33, PRXCA, ATPRX33, ATPCA | peroxidase CA | chr3:18200713-18202891 FORWARD LENGTH=354	LOC_Os03g13200.1	protein|peroxidase precursor, putative, expressed	IMGA|Medtr5g017850.1	Peroxidase chr5 6345400-6343739 E EGN_Mt100125 20111014	GO:0006952|defense response GO:0009416|response to light stimulus GO:0009826|unidimensional cell growth GO:0042742|defense response to bacterium GO:0050832|defense response to fungus GO:0052033|pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response GO:0072593|reactive oxygen species metabolic process	GO:0004601|peroxidase activity GO:0020037|heme binding	GO:0005576|extracellular region GO:0005773|vacuole GO:0009505|plant-type cell wall
pt2_00505	C	C1S	Potri.001G011400	Potri.001G011400(CS)	sp|O80912|PER23_ARATH	Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=2 SV=1	AT2G38390.1	| Symbols: | Peroxidase superfamily protein | chr2:16079726-16081381 FORWARD LENGTH=349	LOC_Os11g02100.1	protein|peroxidase precursor, putative, expressed	IMGA|Medtr5g017850.1	Peroxidase chr5 6345400-6343739 E EGN_Mt100125 20111014	GO:0006979|response to oxidative stress GO:0055114|oxidation-reduction process	GO:0004601|peroxidase activity GO:0020037|heme binding	GO:0005576|extracellular region GO:0005774|vacuolar membrane
pt2_00506	B	B1S	Potri.001G013200	Potri.001G013200(BS)	POPTR_0001s05070	sp|Q7F8R0|C3H14_ORYSJ	Zinc finger CCCH domain-containing protein 14 OS=Oryza sativa subsp. japonica GN=Os02g0194200 PE=2 SV=1	AT5G06770.1	| Symbols: | KH domain-containing protein / zinc finger (CCCH type) family protein | chr5:2090937-2092787 REVERSE LENGTH=240	LOC_Os02g10080.1	protein|zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	IMGA|Medtr1g116940.1	Zinc finger CCCH domain-containing protein chr1 34111516-34106513 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003676|nucleic acid binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0003723|RNA binding GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_00507	A	A1S	Potri.001G013300	Potri.001G013300(AS)	POPTR_0001s05080	NA	NA	AT1G73240.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Nucleoporin protein Ndc1-Nup (InterPro:IPR019049); Has 36 Blast hits to 36 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:27542397-27544668 REVERSE LENGTH=519	LOC_Os02g45920.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_00508	G	G1	NA	NA	POPTR_0001s05090	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00509	A	A1S	Potri.001G013500	Potri.001G013500(AS)	POPTR_0001s05100	sp|P80030|FABI_BRANA	Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic OS=Brassica napus PE=1 SV=2	AT2G05990.2	| Symbols: MOD1, ENR1 | NAD(P)-binding Rossmann-fold superfamily protein | chr2:2322876-2324867 FORWARD LENGTH=390	LOC_Os08g23810.1	protein|enoyl-acyl-carrier-protein reductase NADH, chloroplast precursor, expressed	NA	NA	GO:0006084|acetyl-CoA metabolic process GO:0006633|fatty acid biosynthetic process GO:0006816|calcium ion transport GO:0007030|Golgi organization GO:0008152|metabolic process GO:0009651|response to salt stress GO:0016126|sterol biosynthetic process GO:0016132|brassinosteroid biosynthetic process GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0004318|enoyl-[acyl-carrier-protein] reductase (NADH) activity GO:0005507|copper ion binding GO:0016491|oxidoreductase activity GO:0016631|enoyl-[acyl-carrier-protein] reductase activity	GO:0005835|fatty acid synthase complex GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009579|thylakoid GO:0009941|chloroplast envelope
pt2_00510	A	A2S	Potri.001G013500	Potri.001G013500(AS) Potri.003G212700(DS)	POPTR_0001s05100	sp|P80030|FABI_BRANA	Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic OS=Brassica napus PE=1 SV=2	AT2G05990.2	| Symbols: MOD1, ENR1 | NAD(P)-binding Rossmann-fold superfamily protein | chr2:2322876-2324867 FORWARD LENGTH=390	LOC_Os08g23810.1	protein|enoyl-acyl-carrier-protein reductase NADH, chloroplast precursor, expressed	NA	NA	GO:0006084|acetyl-CoA metabolic process GO:0006633|fatty acid biosynthetic process GO:0006816|calcium ion transport GO:0007030|Golgi organization GO:0008152|metabolic process GO:0009651|response to salt stress GO:0016126|sterol biosynthetic process GO:0016132|brassinosteroid biosynthetic process GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0004318|enoyl-[acyl-carrier-protein] reductase (NADH) activity GO:0005507|copper ion binding GO:0016491|oxidoreductase activity GO:0016631|enoyl-[acyl-carrier-protein] reductase activity	GO:0005835|fatty acid synthase complex GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009579|thylakoid GO:0009941|chloroplast envelope
pt2_00511	A	A1S	Potri.001G013600	Potri.001G013600(AS)	POPTR_0001s05110	NA	NA	AT3G57980.1	| Symbols: | DNA-binding bromodomain-containing protein | chr3:21466919-21469148 REVERSE LENGTH=632	LOC_Os08g39980.1	protein|DNA-binding bromodomain-containing protein, putative, expressed	NA	NA	NA	GO:0003677|DNA binding	GO:0005634|nucleus
pt2_00512	A	A1S	Potri.001G013600	Potri.001G013600(AS)	POPTR_0001s05120	NA	NA	AT3G57980.1	| Symbols: | DNA-binding bromodomain-containing protein | chr3:21466919-21469148 REVERSE LENGTH=632	LOC_Os08g39980.1	protein|DNA-binding bromodomain-containing protein, putative, expressed	NA	NA	NA	GO:0003677|DNA binding	GO:0005634|nucleus
pt2_00513	A	A2S	Potri.T166500	Potri.T166500(AS) Potri.012G049800(BS)	POPTR_0001s05130	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00514	A	A1S	Potri.001G013700	Potri.001G013700(AS)	POPTR_0001s05140	NA	NA	AT5G19630.1	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr5:6628147-6629937 REVERSE LENGTH=228	LOC_Os02g48590.1	protein|expressed protein	NA	NA	GO:0006508|proteolysis GO:0008150|biological_process	GO:0004177|aminopeptidase activity	GO:0005575|cellular_component
pt2_00515	A	A1S	Potri.001G013800	Potri.001G013800(AS)	POPTR_0001s05150	NA	NA	AT5G13020.1	| Symbols: | Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein | chr5:4129691-4132089 REVERSE LENGTH=397	LOC_Os08g23930.2	protein|ENT domain containing protein, expressed	NA	NA	GO:0008150|biological_process GO:0008284|positive regulation of cell proliferation GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00516	A	A1S	Potri.001G013900	Potri.001G013900(AS)	POPTR_0001s05160	sp|A1K5T6|Y1574_AZOSB	UPF0061 protein azo1574 OS=Azoarcus sp. (strain BH72) GN=azo1574 PE=3 SV=1	AT5G13030.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0061 (InterPro:IPR003846); Has 5046 Blast hits to 4997 proteins in 1211 species: Archae - 8; Bacteria - 2327; Metazoa - 120; Fungi - 134; Plants - 48; Viruses - 0; Other Eukaryotes - 2409 (source: NCBI BLink). | chr5:4133216-4136461 FORWARD LENGTH=633	LOC_Os06g21600.1	protein|selenoprotein O, putative, expressed	IMGA|Medtr1g116880.1	hypothetical protein chr1 34086876-34078092 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_00517	A	A1S	Potri.001G014000	Potri.001G014000(AS)	POPTR_0001s05170	sp|Q9SXP7|LIPB_ARATH	Octanoyltransferase OS=Arabidopsis thaliana GN=LIP2 PE=1 SV=1	AT1G04640.2	| Symbols: LIP2 | lipoyltransferase 2 | chr1:1292541-1293248 FORWARD LENGTH=235	LOC_Os03g20560.1	protein|biotin--protein ligase, putative, expressed	NA	NA	GO:0000096|sulfur amino acid metabolic process GO:0006098|pentose-phosphate shunt GO:0006364|rRNA processing GO:0006464|cellular protein modification process GO:0006546|glycine catabolic process GO:0006636|unsaturated fatty acid biosynthetic process GO:0006733|oxidoreduction coenzyme metabolic process GO:0006766|vitamin metabolic process GO:0008652|cellular amino acid biosynthetic process GO:0009072|aromatic amino acid family metabolic process GO:0009106|lipoate metabolic process GO:0009107|lipoate biosynthetic process GO:0009108|coenzyme biosynthetic process GO:0009117|nucleotide metabolic process GO:0009249|protein lipoylation GO:0009695|jasmonic acid biosynthetic process GO:0015995|chlorophyll biosynthetic process GO:0019243|methylglyoxal catabolic process to D-lactate GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019748|secondary metabolic process GO:0044272|sulfur compound biosynthetic process	GO:0003824|catalytic activity GO:0016415|octanoyltransferase activity GO:0017118|lipoyltransferase activity GO:0033819|lipoyl(octanoyl) transferase activity	GO:0005737|cytoplasm GO:0005739|mitochondrion
pt2_00518	C	C1S	Potri.001G014000	Potri.001G014000(CS)	sp|Q9SXP7|LIPB_ARATH	Octanoyltransferase OS=Arabidopsis thaliana GN=LIP2 PE=1 SV=1	AT1G04640.2	| Symbols: LIP2 | lipoyltransferase 2 | chr1:1292541-1293248 FORWARD LENGTH=235	LOC_Os03g20560.1	protein|biotin--protein ligase, putative, expressed	NA	NA	GO:0000096|sulfur amino acid metabolic process GO:0006098|pentose-phosphate shunt GO:0006364|rRNA processing GO:0006464|cellular protein modification process GO:0006546|glycine catabolic process GO:0006636|unsaturated fatty acid biosynthetic process GO:0006733|oxidoreduction coenzyme metabolic process GO:0006766|vitamin metabolic process GO:0008652|cellular amino acid biosynthetic process GO:0009072|aromatic amino acid family metabolic process GO:0009106|lipoate metabolic process GO:0009107|lipoate biosynthetic process GO:0009108|coenzyme biosynthetic process GO:0009117|nucleotide metabolic process GO:0009249|protein lipoylation GO:0009695|jasmonic acid biosynthetic process GO:0015995|chlorophyll biosynthetic process GO:0019243|methylglyoxal catabolic process to D-lactate GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019748|secondary metabolic process GO:0044272|sulfur compound biosynthetic process	GO:0003824|catalytic activity GO:0016415|octanoyltransferase activity GO:0017118|lipoyltransferase activity GO:0033819|lipoyl(octanoyl) transferase activity	GO:0005737|cytoplasm GO:0005739|mitochondrion
pt2_00519	A	A1S	Potri.001G014000	Potri.001G014000(AS)	POPTR_0001s05180	sp|Q9SXP7|LIPB_ARATH	Octanoyltransferase OS=Arabidopsis thaliana GN=LIP2 PE=1 SV=1	AT1G04640.2	| Symbols: LIP2 | lipoyltransferase 2 | chr1:1292541-1293248 FORWARD LENGTH=235	LOC_Os03g20560.1	protein|biotin--protein ligase, putative, expressed	NA	NA	GO:0000096|sulfur amino acid metabolic process GO:0006098|pentose-phosphate shunt GO:0006364|rRNA processing GO:0006464|cellular protein modification process GO:0006546|glycine catabolic process GO:0006636|unsaturated fatty acid biosynthetic process GO:0006733|oxidoreduction coenzyme metabolic process GO:0006766|vitamin metabolic process GO:0008652|cellular amino acid biosynthetic process GO:0009072|aromatic amino acid family metabolic process GO:0009106|lipoate metabolic process GO:0009107|lipoate biosynthetic process GO:0009108|coenzyme biosynthetic process GO:0009117|nucleotide metabolic process GO:0009249|protein lipoylation GO:0009695|jasmonic acid biosynthetic process GO:0015995|chlorophyll biosynthetic process GO:0019243|methylglyoxal catabolic process to D-lactate GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019748|secondary metabolic process GO:0044272|sulfur compound biosynthetic process	GO:0003824|catalytic activity GO:0016415|octanoyltransferase activity GO:0017118|lipoyltransferase activity GO:0033819|lipoyl(octanoyl) transferase activity	GO:0005737|cytoplasm GO:0005739|mitochondrion
pt2_00520	A	A2S	Potri.001G014100	Potri.001G014100(AS) Potri.001G014600(AS)	POPTR_0001s05190	sp|Q39202|RLK1_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 OS=Arabidopsis thaliana GN=RLK1 PE=2 SV=2	AT5G60900.1	| Symbols: RLK1 | receptor-like protein kinase 1 | chr5:24498467-24501494 REVERSE LENGTH=748	LOC_Os04g12600.1	protein|receptor-like protein kinase, putative, expressed	IMGA|Medtr5g013130.1	Kinase-like protein chr5 3871934-3874336 H EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0006355|regulation of transcription, DNA-dependent GO:0006468|protein phosphorylation GO:0006612|protein targeting to membrane GO:0009617|response to bacterium GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0031348|negative regulation of defense response GO:0035304|regulation of protein dephosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_00521	A	A2S	Potri.001G014300	Potri.001G014300(AS) Potri.001G014400(DS)	POPTR_0001s05200	sp|Q39202|RLK1_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 OS=Arabidopsis thaliana GN=RLK1 PE=2 SV=2	AT5G60900.1	| Symbols: RLK1 | receptor-like protein kinase 1 | chr5:24498467-24501494 REVERSE LENGTH=748	LOC_Os04g12580.1	protein|receptor-like protein kinase, putative, expressed	IMGA|Medtr5g013130.1	Kinase-like protein chr5 3871934-3874336 H EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0006355|regulation of transcription, DNA-dependent GO:0006468|protein phosphorylation GO:0006612|protein targeting to membrane GO:0009617|response to bacterium GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0031348|negative regulation of defense response GO:0035304|regulation of protein dephosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_00522	A	A1S	Potri.001G014400	Potri.001G014400(AS)	POPTR_0001s05210	sp|Q39202|RLK1_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 OS=Arabidopsis thaliana GN=RLK1 PE=2 SV=2	AT5G60900.1	| Symbols: RLK1 | receptor-like protein kinase 1 | chr5:24498467-24501494 REVERSE LENGTH=748	LOC_Os04g12600.1	protein|receptor-like protein kinase, putative, expressed	IMGA|Medtr5g013130.1	Kinase-like protein chr5 3871934-3874336 H EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0006355|regulation of transcription, DNA-dependent GO:0006468|protein phosphorylation GO:0006612|protein targeting to membrane GO:0009617|response to bacterium GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0031348|negative regulation of defense response GO:0035304|regulation of protein dephosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_00523	A	A1S	Potri.001G014400	Potri.001G014400(AS)	POPTR_0001s05220	sp|Q39202|RLK1_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 OS=Arabidopsis thaliana GN=RLK1 PE=2 SV=2	AT5G60900.1	| Symbols: RLK1 | receptor-like protein kinase 1 | chr5:24498467-24501494 REVERSE LENGTH=748	LOC_Os04g12600.1	protein|receptor-like protein kinase, putative, expressed	IMGA|Medtr5g013130.1	Kinase-like protein chr5 3871934-3874336 H EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0006355|regulation of transcription, DNA-dependent GO:0006468|protein phosphorylation GO:0006612|protein targeting to membrane GO:0009617|response to bacterium GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0031348|negative regulation of defense response GO:0035304|regulation of protein dephosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_00524	A	A2S	Potri.001G014500	Potri.001G014500(AS) Potri.001G014700(DS)	POPTR_0001s05230	sp|Q39202|RLK1_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 OS=Arabidopsis thaliana GN=RLK1 PE=2 SV=2	AT5G60900.1	| Symbols: RLK1 | receptor-like protein kinase 1 | chr5:24498467-24501494 REVERSE LENGTH=748	LOC_Os04g12560.1	protein|receptor-like protein kinase, putative, expressed	IMGA|Medtr5g013130.1	Kinase-like protein chr5 3871934-3874336 H EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0006355|regulation of transcription, DNA-dependent GO:0006468|protein phosphorylation GO:0006612|protein targeting to membrane GO:0009617|response to bacterium GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0031348|negative regulation of defense response GO:0035304|regulation of protein dephosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_00525	C	C2S	Potri.001G014600	Potri.001G014600(CS) Potri.001G014100(CS)	sp|Q39202|RLK1_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 OS=Arabidopsis thaliana GN=RLK1 PE=2 SV=2	AT5G60900.1	| Symbols: RLK1 | receptor-like protein kinase 1 | chr5:24498467-24501494 REVERSE LENGTH=748	LOC_Os04g39930.1	protein|receptor-like protein kinase, putative, expressed	IMGA|Medtr5g013130.1	Kinase-like protein chr5 3871934-3874336 H EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0006355|regulation of transcription, DNA-dependent GO:0006468|protein phosphorylation GO:0006612|protein targeting to membrane GO:0009617|response to bacterium GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0031348|negative regulation of defense response GO:0035304|regulation of protein dephosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_00526	A	A1S	Potri.001G014700	Potri.001G014700(AS)	POPTR_0001s05250	sp|Q39202|RLK1_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 OS=Arabidopsis thaliana GN=RLK1 PE=2 SV=2	AT5G60900.1	| Symbols: RLK1 | receptor-like protein kinase 1 | chr5:24498467-24501494 REVERSE LENGTH=748	LOC_Os04g12560.1	protein|receptor-like protein kinase, putative, expressed	IMGA|Medtr5g013130.1	Kinase-like protein chr5 3871934-3874336 H EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0006355|regulation of transcription, DNA-dependent GO:0006468|protein phosphorylation GO:0006612|protein targeting to membrane GO:0009617|response to bacterium GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0031348|negative regulation of defense response GO:0035304|regulation of protein dephosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_00527	A	A10S	Potri.001G014800	Potri.001G014800(AS) Potri.T084800(DS) Potri.003G211900(DS) Potri.003G211700(DS) Potri.003G211500(DS) Potri.003G211400(DS) Potri.003G211300(DS) Potri.T085100(DS) Potri.T085000(DS) Potri.T084900(DS)	POPTR_0001s05255	sp|Q39202|RLK1_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 OS=Arabidopsis thaliana GN=RLK1 PE=2 SV=2	AT5G60900.1	| Symbols: RLK1 | receptor-like protein kinase 1 | chr5:24498467-24501494 REVERSE LENGTH=748	LOC_Os04g12600.1	protein|receptor-like protein kinase, putative, expressed	IMGA|Medtr5g013070.1	Kinase-like protein chr5 3848744-3851155 H EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0006355|regulation of transcription, DNA-dependent GO:0006468|protein phosphorylation GO:0006612|protein targeting to membrane GO:0009617|response to bacterium GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0031348|negative regulation of defense response GO:0035304|regulation of protein dephosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_00528	A	A1S	Potri.001G014900	Potri.001G014900(AS)	POPTR_0001s05260	sp|Q9FGR2|PP436_ARATH	Pentatricopeptide repeat-containing protein At5g59600 OS=Arabidopsis thaliana GN=PCMP-E1 PE=2 SV=1	AT5G59600.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:24011315-24012919 REVERSE LENGTH=534	LOC_Os12g36620.1	protein|pentatricopeptide, putative, expressed	IMGA|contig_53197_3.1	Pentatricopeptide repeat protein contig_53197 10365-8485 H PREDN 20111014	GO:0007062|sister chromatid cohesion GO:0007131|reciprocal meiotic recombination GO:0008150|biological_process GO:0033044|regulation of chromosome organization GO:0042138|meiotic DNA double-strand break formation GO:0045132|meiotic chromosome segregation	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_00529	A	A3S	Potri.001G015000	Potri.001G015000(AS) Potri.003G211200(DS) Potri.T085200(DS)	POPTR_0001s05270	NA	NA	AT3G57930.2	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42190.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr3:21447250-21447675 REVERSE LENGTH=141	LOC_Os02g48600.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00530	A	A1S	Potri.001G015100	Potri.001G015100(AS)	POPTR_0001s05280	sp|Q5Z9Z0|BGL24_ORYSJ	Beta-glucosidase 24 OS=Oryza sativa subsp. japonica GN=BGLU24 PE=2 SV=1	AT5G44640.1	| Symbols: BGLU13 | beta glucosidase 13 | chr5:18011146-18012669 FORWARD LENGTH=507	LOC_Os06g21570.1	protein|Os6bglu24 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed	IMGA|Medtr5g071520.1	Beta-glucosidase D7 chr5 29396807-29401668 H EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0043169|cation binding	GO:0005576|extracellular region GO:0005794|Golgi apparatus
pt2_00531	A	A1S	Potri.001G015200	Potri.001G015200(AS)	POPTR_0001s05290	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00532	A	A2S	Potri.001G015300	Potri.001G015300(AS) Potri.001G015400(DS)	POPTR_0001s05310	sp|O24370|LOX21_SOLTU	Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum GN=LOX2.1 PE=1 SV=1	AT3G45140.1	| Symbols: LOX2, ATLOX2 | lipoxygenase 2 | chr3:16525437-16529233 FORWARD LENGTH=896	LOC_Os02g10120.1	protein|lipoxygenase, putative, expressed	IMGA|Medtr1g104650.1	Lipoxygenase chr1 30761068-30754677 F EGN_Mt100125 20111014	GO:0000023|maltose metabolic process GO:0000096|sulfur amino acid metabolic process GO:0006546|glycine catabolic process GO:0006636|unsaturated fatty acid biosynthetic process GO:0006733|oxidoreduction coenzyme metabolic process GO:0006766|vitamin metabolic process GO:0006816|calcium ion transport GO:0007030|Golgi organization GO:0008652|cellular amino acid biosynthetic process GO:0009072|aromatic amino acid family metabolic process GO:0009106|lipoate metabolic process GO:0009108|coenzyme biosynthetic process GO:0009117|nucleotide metabolic process GO:0009269|response to desiccation GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009416|response to light stimulus GO:0009611|response to wounding GO:0009617|response to bacterium GO:0009620|response to fungus GO:0009651|response to salt stress GO:0009695|jasmonic acid biosynthetic process GO:0009737|response to abscisic acid stimulus GO:0009753|response to jasmonic acid stimulus GO:0015994|chlorophyll metabolic process GO:0015995|chlorophyll biosynthetic process GO:0016117|carotenoid biosynthetic process GO:0019216|regulation of lipid metabolic process GO:0019252|starch biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019748|secondary metabolic process GO:0030003|cellular cation homeostasis GO:0031408|oxylipin biosynthetic process GO:0034440|lipid oxidation GO:0044272|sulfur compound biosynthetic process GO:0051707|response to other organism GO:0070838|divalent metal ion transport GO:0080027|response to herbivore	GO:0005515|protein binding GO:0016165|lipoxygenase activity	GO:0005737|cytoplasm GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope
pt2_00533	A	A2S	Potri.001G015400	Potri.001G015400(AS) Potri.001G015300(DS)	POPTR_0001s05320	sp|O24370|LOX21_SOLTU	Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum GN=LOX2.1 PE=1 SV=1	AT3G45140.1	| Symbols: LOX2, ATLOX2 | lipoxygenase 2 | chr3:16525437-16529233 FORWARD LENGTH=896	LOC_Os02g10120.1	protein|lipoxygenase, putative, expressed	IMGA|Medtr1g083020.1	Lipoxygenase chr1 21433844-21440226 E EGN_Mt100125 20111014	GO:0000023|maltose metabolic process GO:0000096|sulfur amino acid metabolic process GO:0006546|glycine catabolic process GO:0006636|unsaturated fatty acid biosynthetic process GO:0006733|oxidoreduction coenzyme metabolic process GO:0006766|vitamin metabolic process GO:0006816|calcium ion transport GO:0007030|Golgi organization GO:0008652|cellular amino acid biosynthetic process GO:0009072|aromatic amino acid family metabolic process GO:0009106|lipoate metabolic process GO:0009108|coenzyme biosynthetic process GO:0009117|nucleotide metabolic process GO:0009269|response to desiccation GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009416|response to light stimulus GO:0009611|response to wounding GO:0009617|response to bacterium GO:0009620|response to fungus GO:0009651|response to salt stress GO:0009695|jasmonic acid biosynthetic process GO:0009737|response to abscisic acid stimulus GO:0009753|response to jasmonic acid stimulus GO:0015994|chlorophyll metabolic process GO:0015995|chlorophyll biosynthetic process GO:0016117|carotenoid biosynthetic process GO:0019216|regulation of lipid metabolic process GO:0019252|starch biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019748|secondary metabolic process GO:0030003|cellular cation homeostasis GO:0031408|oxylipin biosynthetic process GO:0034440|lipid oxidation GO:0044272|sulfur compound biosynthetic process GO:0051707|response to other organism GO:0070838|divalent metal ion transport GO:0080027|response to herbivore	GO:0005515|protein binding GO:0016165|lipoxygenase activity	GO:0005737|cytoplasm GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope
pt2_00534	A	A3S	Potri.001G015600	Potri.001G015600(AS) Potri.001G015500(AS) Potri.017G046200(BS)	POPTR_0001s05330	sp|O24370|LOX21_SOLTU	Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum GN=LOX2.1 PE=1 SV=1	AT3G45140.1	| Symbols: LOX2, ATLOX2 | lipoxygenase 2 | chr3:16525437-16529233 FORWARD LENGTH=896	LOC_Os02g10120.1	protein|lipoxygenase, putative, expressed	IMGA|Medtr1g104650.1	Lipoxygenase chr1 30761068-30754677 F EGN_Mt100125 20111014	GO:0000023|maltose metabolic process GO:0000096|sulfur amino acid metabolic process GO:0006546|glycine catabolic process GO:0006636|unsaturated fatty acid biosynthetic process GO:0006733|oxidoreduction coenzyme metabolic process GO:0006766|vitamin metabolic process GO:0006816|calcium ion transport GO:0007030|Golgi organization GO:0008652|cellular amino acid biosynthetic process GO:0009072|aromatic amino acid family metabolic process GO:0009106|lipoate metabolic process GO:0009108|coenzyme biosynthetic process GO:0009117|nucleotide metabolic process GO:0009269|response to desiccation GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009416|response to light stimulus GO:0009611|response to wounding GO:0009617|response to bacterium GO:0009620|response to fungus GO:0009651|response to salt stress GO:0009695|jasmonic acid biosynthetic process GO:0009737|response to abscisic acid stimulus GO:0009753|response to jasmonic acid stimulus GO:0015994|chlorophyll metabolic process GO:0015995|chlorophyll biosynthetic process GO:0016117|carotenoid biosynthetic process GO:0019216|regulation of lipid metabolic process GO:0019252|starch biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019748|secondary metabolic process GO:0030003|cellular cation homeostasis GO:0031408|oxylipin biosynthetic process GO:0034440|lipid oxidation GO:0044272|sulfur compound biosynthetic process GO:0051707|response to other organism GO:0070838|divalent metal ion transport GO:0080027|response to herbivore	GO:0005515|protein binding GO:0016165|lipoxygenase activity	GO:0005737|cytoplasm GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope
pt2_00535	A	A3S	Potri.001G015600	Potri.001G015600(AS) Potri.001G015500(AS) Potri.017G046200(BS)	POPTR_0001s05330	sp|O24370|LOX21_SOLTU	Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum GN=LOX2.1 PE=1 SV=1	AT3G45140.1	| Symbols: LOX2, ATLOX2 | lipoxygenase 2 | chr3:16525437-16529233 FORWARD LENGTH=896	LOC_Os02g10120.1	protein|lipoxygenase, putative, expressed	IMGA|Medtr1g104650.1	Lipoxygenase chr1 30761068-30754677 F EGN_Mt100125 20111014	GO:0000023|maltose metabolic process GO:0000096|sulfur amino acid metabolic process GO:0006546|glycine catabolic process GO:0006636|unsaturated fatty acid biosynthetic process GO:0006733|oxidoreduction coenzyme metabolic process GO:0006766|vitamin metabolic process GO:0006816|calcium ion transport GO:0007030|Golgi organization GO:0008652|cellular amino acid biosynthetic process GO:0009072|aromatic amino acid family metabolic process GO:0009106|lipoate metabolic process GO:0009108|coenzyme biosynthetic process GO:0009117|nucleotide metabolic process GO:0009269|response to desiccation GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009416|response to light stimulus GO:0009611|response to wounding GO:0009617|response to bacterium GO:0009620|response to fungus GO:0009651|response to salt stress GO:0009695|jasmonic acid biosynthetic process GO:0009737|response to abscisic acid stimulus GO:0009753|response to jasmonic acid stimulus GO:0015994|chlorophyll metabolic process GO:0015995|chlorophyll biosynthetic process GO:0016117|carotenoid biosynthetic process GO:0019216|regulation of lipid metabolic process GO:0019252|starch biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019748|secondary metabolic process GO:0030003|cellular cation homeostasis GO:0031408|oxylipin biosynthetic process GO:0034440|lipid oxidation GO:0044272|sulfur compound biosynthetic process GO:0051707|response to other organism GO:0070838|divalent metal ion transport GO:0080027|response to herbivore	GO:0005515|protein binding GO:0016165|lipoxygenase activity	GO:0005737|cytoplasm GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope
pt2_00536	A	A1S	Potri.001G015700	Potri.001G015700(AS)	POPTR_0001s05340	sp|Q6DN14|MCTP1_HUMAN	Multiple C2 and transmembrane domain-containing protein 1 OS=Homo sapiens GN=MCTP1 PE=2 SV=2	AT5G12970.1	| Symbols: | Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein | chr5:4102992-4105301 FORWARD LENGTH=769	LOC_Os05g30750.4	protein|anthranilate phosphoribosyltransferase, putative, expressed	IMGA|Medtr5g010390.1	Glutathione peroxidase chr5 2530505-2527317 E EGN_Mt100125 20111014	GO:0000162|tryptophan biosynthetic process	GO:0003674|molecular_function	GO:0005618|cell wall GO:0005739|mitochondrion GO:0005783|endoplasmic reticulum GO:0009506|plasmodesma
pt2_00537	A	A1S	Potri.001G015800	Potri.001G015800(AS)	POPTR_0001s05350	NA	NA	AT5G04690.1	| Symbols: | Ankyrin repeat family protein | chr5:1349781-1352525 REVERSE LENGTH=625	NA	NA	IMGA|Medtr5g028190.1	Ankyrin repeat-containing protein chr5 11544808-11542938 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_00538	A	A1S	Potri.001G015900	Potri.001G015900(AS)	POPTR_0001s05360	sp|O23116|EIL3_ARATH	ETHYLENE INSENSITIVE 3-like 3 protein OS=Arabidopsis thaliana GN=EIL3 PE=1 SV=1	AT1G73730.1	| Symbols: EIL3, SLIM1, ATSLIM, AtEIL3 | ETHYLENE-INSENSITIVE3-like 3 | chr1:27730434-27732363 REVERSE LENGTH=567	LOC_Os09g31400.1	protein|ethylene-insensitive 3, putative, expressed	IMGA|Medtr5g087790.1	Ethylene insensitive 3-like protein chr5 37070497-37067220 F EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0000303|response to superoxide GO:0006355|regulation of transcription, DNA-dependent GO:0006612|protein targeting to membrane GO:0007165|signal transduction GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009605|response to external stimulus GO:0009651|response to salt stress GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009743|response to carbohydrate stimulus GO:0009753|response to jasmonic acid stimulus GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009873|ethylene mediated signaling pathway GO:0009970|cellular response to sulfate starvation GO:0010363|regulation of plant-type hypersensitive response GO:0030968|endoplasmic reticulum unfolded protein response GO:0031348|negative regulation of defense response GO:0035556|intracellular signal transduction GO:0042538|hyperosmotic salinity response GO:0042762|regulation of sulfur metabolic process GO:0043069|negative regulation of programmed cell death GO:0050832|defense response to fungus GO:0071281|cellular response to iron ion	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00539	A	A1S	Potri.001G016000	Potri.001G016000(AS)	POPTR_0001s05370	sp|O23116|EIL3_ARATH	ETHYLENE INSENSITIVE 3-like 3 protein OS=Arabidopsis thaliana GN=EIL3 PE=1 SV=1	AT1G73730.1	| Symbols: EIL3, SLIM1, ATSLIM, AtEIL3 | ETHYLENE-INSENSITIVE3-like 3 | chr1:27730434-27732363 REVERSE LENGTH=567	LOC_Os09g31400.1	protein|ethylene-insensitive 3, putative, expressed	IMGA|Medtr5g087790.1	Ethylene insensitive 3-like protein chr5 37070497-37067220 F EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0000303|response to superoxide GO:0006355|regulation of transcription, DNA-dependent GO:0006612|protein targeting to membrane GO:0007165|signal transduction GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009605|response to external stimulus GO:0009651|response to salt stress GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009743|response to carbohydrate stimulus GO:0009753|response to jasmonic acid stimulus GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009873|ethylene mediated signaling pathway GO:0009970|cellular response to sulfate starvation GO:0010363|regulation of plant-type hypersensitive response GO:0030968|endoplasmic reticulum unfolded protein response GO:0031348|negative regulation of defense response GO:0035556|intracellular signal transduction GO:0042538|hyperosmotic salinity response GO:0042762|regulation of sulfur metabolic process GO:0043069|negative regulation of programmed cell death GO:0050832|defense response to fungus GO:0071281|cellular response to iron ion	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00540	A	A1S	Potri.001G016100	Potri.001G016100(AS)	POPTR_0001s05380	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00541	B	B1S	Potri.001G016200	Potri.001G016200(BS)	POPTR_0001s05390	sp|Q9CXT6|KDM8_MOUSE	Lysine-specific demethylase 8 OS=Mus musculus GN=Kdm8 PE=2 SV=1	AT3G20810.1	| Symbols: JMJD5 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr3:7275814-7278144 FORWARD LENGTH=418	LOC_Os09g31380.1	protein|jmjC domain-containing protein 5, putative, expressed	IMGA|Medtr5g025190.1	JmjC domain-containing protein chr5 9962182-9965347 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0007623|circadian rhythm GO:0042752|regulation of circadian rhythm	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00542	A	A1S	Potri.001G016300	Potri.001G016300(AS)	POPTR_0001s05400	sp|Q9LXV0|U92A1_ARATH	UDP-glycosyltransferase 92A1 OS=Arabidopsis thaliana GN=UGT92A1 PE=2 SV=1	AT5G12890.1	| Symbols: | UDP-Glycosyltransferase superfamily protein | chr5:4069658-4071124 REVERSE LENGTH=488	LOC_Os04g42690.1	protein|UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed	IMGA|Medtr5g087620.1	UDP-glucuronosyltransferase 1-7C chr5 36976756-36978339 E EGN_Mt100125 20111014	GO:0008152|metabolic process	GO:0008194|UDP-glycosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups	NA
pt2_00543	A	A1A	Potri.001G016400	Potri.001G016400(AA)	POPTR_0001s05410	sp|Q9LXV0|U92A1_ARATH	UDP-glycosyltransferase 92A1 OS=Arabidopsis thaliana GN=UGT92A1 PE=2 SV=1	AT5G12890.1	| Symbols: | UDP-Glycosyltransferase superfamily protein | chr5:4069658-4071124 REVERSE LENGTH=488	LOC_Os04g20474.3	protein|UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed	IMGA|Medtr5g087620.1	UDP-glucuronosyltransferase 1-7C chr5 36976756-36978339 E EGN_Mt100125 20111014	GO:0008152|metabolic process	GO:0008194|UDP-glycosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups	NA
pt2_00544	A	A1S	Potri.001G016500	Potri.001G016500(AS)	POPTR_0001s05420	sp|Q9LXV0|U92A1_ARATH	UDP-glycosyltransferase 92A1 OS=Arabidopsis thaliana GN=UGT92A1 PE=2 SV=1	AT5G12890.1	| Symbols: | UDP-Glycosyltransferase superfamily protein | chr5:4069658-4071124 REVERSE LENGTH=488	LOC_Os04g42690.1	protein|UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed	IMGA|Medtr5g087620.1	UDP-glucuronosyltransferase 1-7C chr5 36976756-36978339 E EGN_Mt100125 20111014	GO:0008152|metabolic process	GO:0008194|UDP-glycosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups	NA
pt2_00545	G	G1	NA	NA	POPTR_0001s05430	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00546	A	A1S	Potri.001G016600	Potri.001G016600(AS)	POPTR_0001s05440	NA	NA	AT5G12900.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:4072151-4074445 REVERSE LENGTH=562	LOC_Os08g39740.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function GO:0005515|protein binding	GO:0005634|nucleus
pt2_00547	A	A2S	Potri.001G016700	Potri.001G016700(AS) Potri.001G016900(DS)	POPTR_0001s05450	sp|P68428|H32_WHEAT	Histone H3.2 OS=Triticum aestivum PE=1 SV=2	AT5G65360.1	| Symbols: | Histone superfamily protein | chr5:26120099-26120509 REVERSE LENGTH=136	LOC_Os04g34240.1	protein|histone H3, putative, expressed	IMGA|Medtr1g105310.1	Histone H3 chr1 31130267-31130862 F EGN_Mt100125 20111014	GO:0006334|nucleosome assembly	GO:0003677|DNA binding	GO:0000786|nucleosome GO:0005634|nucleus
pt2_00548	A	A1S	Potri.001G016800	Potri.001G016800(AS)	POPTR_0001s05460	NA	NA	AT5G12920.1	| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr5:4077917-4082585 REVERSE LENGTH=537	LOC_Os02g37856.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_00549	A	A2S	Potri.001G016900	Potri.001G016900(AS) Potri.001G016700(BS)	POPTR_0001s05470	sp|P68428|H32_WHEAT	Histone H3.2 OS=Triticum aestivum PE=1 SV=2	AT5G65360.1	| Symbols: | Histone superfamily protein | chr5:26120099-26120509 REVERSE LENGTH=136	LOC_Os11g05730.1	protein|histone H3, putative, expressed	IMGA|Medtr1g105310.1	Histone H3 chr1 31130267-31130862 F EGN_Mt100125 20111014	GO:0006334|nucleosome assembly	GO:0003677|DNA binding	GO:0000786|nucleosome GO:0005634|nucleus
pt2_00550	A	A1S	Potri.001G017000	Potri.001G017000(AS)	POPTR_0001s05480	NA	NA	AT4G12070.1	| Symbols: | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:7231941-7234272 FORWARD LENGTH=483	LOC_Os02g48640.1	protein|expressed protein	IMGA|Medtr1g105390.1	hypothetical protein chr1 31160925-31163500 E EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_00551	A	A1S	Potri.001G017100	Potri.001G017100(AS)	POPTR_0001s05490	NA	NA	AT5G12930.1	| Symbols: | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:4083155-4085222 REVERSE LENGTH=439	LOC_Os09g31350.1	protein|expressed protein	NA	NA	GO:0008150|biological_process GO:0009723|response to ethylene stimulus	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00552	A	A1S	Potri.001G017300	Potri.001G017300(AS)	POPTR_0001s05500	sp|Q9C690|BH122_ARATH	Transcription factor bHLH122 OS=Arabidopsis thaliana GN=BHLH122 PE=1 SV=1	AT1G51140.1	| Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr1:18943802-18945613 REVERSE LENGTH=379	NA	NA	IMGA|Medtr1g105280.1	Transcription factor bHLH130 chr1 31113232-31108907 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0048573|photoperiodism, flowering	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00553	G	G1	NA	NA	POPTR_0001s05510	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00554	A	A1S	Potri.001G017500	Potri.001G017500(AS)	POPTR_0001s05520	sp|Q00874|DR100_ARATH	DNA-damage-repair/toleration protein DRT100 OS=Arabidopsis thaliana GN=DRT100 PE=2 SV=2	AT3G20820.1	| Symbols: | Leucine-rich repeat (LRR) family protein | chr3:7280930-7282027 FORWARD LENGTH=365	LOC_Os08g39550.1	protein|polygalacturonase inhibitor 2 precursor, putative, expressed	IMGA|Medtr5g069580.1	Receptor protein kinase-like protein chr5 28520745-28517219 H EGN_Mt100125 20111014	GO:0006952|defense response GO:0007165|signal transduction	NA	GO:0005618|cell wall GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0009507|chloroplast GO:0016020|membrane GO:0048046|apoplast
pt2_00555	A	A2S	Potri.001G017600	Potri.001G017600(AS) Potri.T158600(DS)	POPTR_0001s05530	sp|Q9SD53|Y3720_ARATH	UPF0481 protein At3g47200 OS=Arabidopsis thaliana GN=At3g47200 PE=1 SV=1	AT4G31980.1	| Symbols: | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158), Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT5G11290.1); Has 1967 Blast hits to 1844 proteins in 183 species: Archae - 0; Bacteria - 6; Metazoa - 223; Fungi - 83; Plants - 1477; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). | chr4:15464905-15469204 FORWARD LENGTH=680	LOC_Os11g33394.2	protein|plant protein of unknown function domain containing protein, expressed	IMGA|Medtr5g016570.1	hypothetical protein chr5 5698968-5697224 E EGN_Mt100125 20111014	GO:0006865|amino acid transport GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005886|plasma membrane
pt2_00556	B	B1S	Potri.001G017900	Potri.001G017900(BS)	POPTR_0001s05540	sp|Q9SD53|Y3720_ARATH	UPF0481 protein At3g47200 OS=Arabidopsis thaliana GN=At3g47200 PE=1 SV=1	AT4G31980.1	| Symbols: | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158), Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT5G11290.1); Has 1967 Blast hits to 1844 proteins in 183 species: Archae - 0; Bacteria - 6; Metazoa - 223; Fungi - 83; Plants - 1477; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). | chr4:15464905-15469204 FORWARD LENGTH=680	LOC_Os01g21710.1	protein|plant protein of unknown function domain containing protein, expressed	IMGA|Medtr5g086340.1	hypothetical protein chr5 36305986-36307922 H EGN_Mt100125 20111014	GO:0006865|amino acid transport GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005886|plasma membrane
pt2_00557	A	A1A	Potri.001G018100	Potri.001G018100(AA)	POPTR_0001s05550	NA	NA	AT2G39725.2	| Symbols: | LYR family of Fe/S cluster biogenesis protein | chr2:16570070-16570342 FORWARD LENGTH=90	LOC_Os08g17650.1	protein|LYR motif containing protein, putative, expressed	IMGA|Medtr5g008340.1	Succinate dehydrogenase assembly factor-like protein chr5 1516073-1516441 H EGN_Mt100125 20111014	GO:0006626|protein targeting to mitochondrion	GO:0003824|catalytic activity	GO:0005739|mitochondrion
pt2_00558	A	A1S	Potri.001G018200	Potri.001G018200(AS)	POPTR_0001s05560	NA	NA	AT5G12950.1	| Symbols: | Putative glycosyl hydrolase of unknown function (DUF1680) | chr5:4093117-4096806 FORWARD LENGTH=861	LOC_Os02g10190.1	protein|DUF1680 domain containing protein, putative, expressed	IMGA|contig_56688_1.1	Unknown protein contig_56688 639-1789 H PREDN 20111014	NA	GO:0003824|catalytic activity	GO:0005576|extracellular region GO:0005773|vacuole GO:0009505|plant-type cell wall
pt2_00559	A	A1S	Potri.001G018300	Potri.001G018300(AS)	POPTR_0001s05570	sp|Q9LSF1|OXI1_ARATH	Serine/threonine-protein kinase OXI1 OS=Arabidopsis thaliana GN=OXI1 PE=1 SV=1	AT3G20830.1	| Symbols: | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein | chr3:7285024-7286250 REVERSE LENGTH=408	LOC_Os08g39460.1	protein|AGC_PVPK_like_CDK8.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed	IMGA|Medtr5g069000.1	Microtubule-associated serine/threonine-protein kinase chr5 28211794-28220768 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0009733|response to auxin stimulus GO:0009741|response to brassinosteroid stimulus	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus
pt2_00560	A	A1S	Potri.001G018400	Potri.001G018400(AS)	POPTR_0001s05580	sp|Q5YGP7|PLET2_ARATH	AP2-like ethylene-responsive transcription factor PLT2 OS=Arabidopsis thaliana GN=PLT2 PE=2 SV=1	AT1G51190.1	| Symbols: PLT2 | Integrase-type DNA-binding superfamily protein | chr1:18977517-18980305 FORWARD LENGTH=568	LOC_Os04g42570.1	protein|AP2/EREBP transcription factor BABY BOOM, putative, expressed	IMGA|Medtr5g031880.1	AP2-like ethylene-responsive transcription factor BBM chr5 13258840-13254528 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0007389|pattern specification process GO:0019827|stem cell maintenance GO:0048364|root development GO:0051302|regulation of cell division	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00561	A	A1S	Potri.001G018500	Potri.001G018500(AS)	POPTR_0001s05590	sp|Q54G07|SLMO_DICDI	Protein slowmo homolog OS=Dictyostelium discoideum GN=slmo PE=3 SV=1	AT5G13070.1	| Symbols: | MSF1-like family protein | chr5:4148216-4149062 FORWARD LENGTH=183	LOC_Os02g48670.1	protein|slowmo homolog, putative, expressed	NA	NA	NA	NA	GO:0005739|mitochondrion
pt2_00562	A	A1S	Potri.001G018600	Potri.001G018600(AS)	POPTR_0001s05600	sp|A3BDI8|SAP8_ORYSJ	Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. japonica GN=SAP8 PE=2 SV=1	AT1G51200.4	| Symbols: | A20/AN1-like zinc finger family protein | chr1:18985690-18986211 FORWARD LENGTH=173	LOC_Os06g41010.3	protein|zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed	NA	NA	GO:0007067|mitosis GO:0008150|biological_process GO:0048573|photoperiodism, flowering	GO:0003677|DNA binding GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_00563	A	A1S	Potri.001G018700	Potri.001G018700(AS)	POPTR_0001s05610	sp|Q9LT35|NEK6_ARATH	Serine/threonine-protein kinase Nek6 OS=Arabidopsis thaliana GN=NEK6 PE=2 SV=1	AT3G20860.1	| Symbols: ATNEK5, NEK5 | NIMA-related kinase 5 | chr3:7306147-7308434 FORWARD LENGTH=427	LOC_Os02g37830.1	protein|protein kinase domain containing protein, expressed	IMGA|Medtr1g071480.1	Serine/threonine protein kinase Nek2 chr1 17648833-17644700 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_00564	A	A1S	Potri.001G018800	Potri.001G018800(AS)	POPTR_0001s05620	sp|Q940Q3|ZTP29_ARATH	Zinc transporter ZTP29 OS=Arabidopsis thaliana GN=ZTP29 PE=2 SV=1	AT3G20870.1	| Symbols: ZTP29 | ZIP metal ion transporter family | chr3:7309499-7312476 REVERSE LENGTH=276	LOC_Os02g10230.1	protein|metal cation transporter, putative, expressed	NA	NA	GO:0030001|metal ion transport GO:0055085|transmembrane transport	GO:0046873|metal ion transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_00565	A	A1S	Potri.001G018900	Potri.001G018900(AS)	POPTR_0001s05630	sp|Q8VWG3|TT1_ARATH	Protein TRANSPARENT TESTA 1 OS=Arabidopsis thaliana GN=TT1 PE=2 SV=1	AT1G51220.1	| Symbols: WIP5 | WIP domain protein 5 | chr1:18989925-18992034 REVERSE LENGTH=337	LOC_Os08g39390.1	protein|ZOS8-10 - C2H2 zinc finger protein, expressed	IMGA|Medtr5g054090.1	Zinc finger-like protein chr5 21755121-21752391 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003676|nucleic acid binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_00566	A	A1S	Potri.001G019000	Potri.001G019000(AS)	POPTR_0001s05640	sp|Q9C5J8|OEP80_ARATH	Outer envelope protein 80, chloroplastic OS=Arabidopsis thaliana GN=OEP80 PE=1 SV=1	AT5G19620.1	| Symbols: EMB213, OEP80, ATOEP80, TOC75 | outer envelope protein of 80 kDa | chr5:6623323-6627641 FORWARD LENGTH=732	LOC_Os02g10260.1	protein|outer membrane protein, OMP85 family protein, expressed	NA	NA	GO:0009658|chloroplast organization GO:0009793|embryo development ending in seed dormancy GO:0010207|photosystem II assembly	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009536|plastid GO:0009941|chloroplast envelope GO:0016020|membrane GO:0019867|outer membrane
pt2_00567	A	A1S	Potri.001G019100	Potri.001G019100(AS)	POPTR_0001s05650	sp|Q9SH30|HMA5_ARATH	Putative copper-transporting ATPase HMA5 OS=Arabidopsis thaliana GN=HMA5 PE=2 SV=2	AT1G63440.1	| Symbols: HMA5 | heavy metal atpase 5 | chr1:23527655-23531109 FORWARD LENGTH=995	LOC_Os02g10290.1	protein|copper-transporting ATPase, putative, expressed	IMGA|contig_52028_1.1	Copper transporting ATPase contig_52028 7242-460 E PREDN 20111014	GO:0006754|ATP biosynthetic process GO:0006812|cation transport GO:0008152|metabolic process GO:0010043|response to zinc ion GO:0010273|detoxification of copper ion GO:0030001|metal ion transport GO:0046034|ATP metabolic process GO:0046688|response to copper ion	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0005524|ATP binding GO:0015662|ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism GO:0043682|copper-transporting ATPase activity GO:0046872|metal ion binding	GO:0005886|plasma membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_00568	D	D1S	Potri.017G070100	Potri.017G070100(DS)	POPTR_0001s05660	sp|Q8LF36|2A5T_ARATH	Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform OS=Arabidopsis thaliana GN=B'THETA PE=2 SV=2	AT1G13460.2	| Symbols: | Protein phosphatase 2A regulatory B subunit family protein | chr1:4616504-4618180 FORWARD LENGTH=492	LOC_Os03g62730.1	protein|transposon protein, putative, unclassified, expressed	IMGA|Medtr1g011460.1	Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform chr1 2355347-2358219 E EGN_Mt100125 20111014	GO:0007165|signal transduction	GO:0008601|protein phosphatase type 2A regulator activity	GO:0000159|protein phosphatase type 2A complex GO:0005634|nucleus GO:0005829|cytosol
pt2_00569	A	A1S	Potri.001G019200	Potri.001G019200(AS)	POPTR_0001s05670	NA	NA	AT1G21200.1	| Symbols: | sequence-specific DNA binding transcription factors | chr1:7421483-7422814 FORWARD LENGTH=443	LOC_Os12g06640.1	protein|homeodomain, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00570	A	A1S	Potri.001G019300	Potri.001G019300(AS)	POPTR_0001s05680	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00571	A	A1S	Potri.001G019400	Potri.001G019400(AS)	POPTR_0001s05690	sp|P25083|ADT1_SOLTU	ADP,ATP carrier protein, mitochondrial OS=Solanum tuberosum GN=ANT PE=2 SV=1	AT5G13490.2	| Symbols: AAC2 | ADP/ATP carrier 2 | chr5:4336034-4337379 FORWARD LENGTH=385	LOC_Os02g48720.2	protein|mitochondrial carrier protein, putative, expressed	IMGA|Medtr1g012030.1	Brittle 1 protein-like protein chr1 2768338-2765042 H EGN_Mt100125 20111014	GO:0006094|gluconeogenesis GO:0006612|protein targeting to membrane GO:0006810|transport GO:0006820|anion transport GO:0006862|nucleotide transport GO:0006865|amino acid transport GO:0006888|ER to Golgi vesicle-mediated transport GO:0006944|cellular membrane fusion GO:0007010|cytoskeleton organization GO:0010363|regulation of plant-type hypersensitive response GO:0010498|proteasomal protein catabolic process GO:0015696|ammonium transport GO:0015802|basic amino acid transport GO:0015865|purine nucleotide transport GO:0043069|negative regulation of programmed cell death GO:0043090|amino acid import GO:0043269|regulation of ion transport GO:0055085|transmembrane transport	GO:0005215|transporter activity GO:0005471|ATP:ADP antiporter activity GO:0005507|copper ion binding GO:0005515|protein binding	GO:0005739|mitochondrion GO:0005740|mitochondrial envelope GO:0005743|mitochondrial inner membrane GO:0005774|vacuolar membrane GO:0009507|chloroplast GO:0009941|chloroplast envelope GO:0016020|membrane
pt2_00572	A	A1S	Potri.001G019500	Potri.001G019500(AS)	POPTR_0001s05700	sp|Q9SJZ3|PP169_ARATH	Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2 SV=1	AT2G22410.1	| Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080 FORWARD LENGTH=681	LOC_Os10g26070.1	protein|pentatricopeptide, putative, expressed	IMGA|Medtr5g018690.1	Pentatricopeptide repeat-containing protein chr5 6711674-6714567 E EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005739|mitochondrion
pt2_00573	A	A1S	Potri.001G019600	Potri.001G019600(AS)	POPTR_0001s05710	sp|Q8L649|BB_ARATH	E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana GN=BB PE=1 SV=1	AT3G63530.2	| Symbols: BB, BB2 | RING/U-box superfamily protein | chr3:23456407-23457787 REVERSE LENGTH=248	LOC_Os03g07790.1	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr1g114240.2	RING finger protein chr1 33086901-33092916 F EGN_Mt100125 20111014	GO:0016567|protein ubiquitination GO:0046621|negative regulation of organ growth GO:0048437|floral organ development GO:0051865|protein autoubiquitination	GO:0004842|ubiquitin-protein ligase activity GO:0008270|zinc ion binding GO:0031624|ubiquitin conjugating enzyme binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00574	A	A1S	Potri.001G019700	Potri.001G019700(AS)	POPTR_0001s05720	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00575	B	B1S	Potri.001G019800	Potri.001G019800(BS)	POPTR_0001s05730	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00576	B	B4S	Potri.001G020100	Potri.001G020100(BS) Potri.001G020000(BS) Potri.001G019700(DS) Potri.001G019900(DS)	POPTR_0001s05740	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00577	A	A1S	Potri.001G020200	Potri.001G020200(AS)	POPTR_0001s05750	NA	NA	AT2G16770.1	| Symbols: bZIP23 | Basic-leucine zipper (bZIP) transcription factor family protein | chr2:7279859-7280817 FORWARD LENGTH=249	LOC_Os01g58760.1	protein|bZIP transcription factor domain containing protein, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0009410|response to xenobiotic stimulus GO:0010043|response to zinc ion GO:0030968|endoplasmic reticulum unfolded protein response GO:0071294|cellular response to zinc ion	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0043565|sequence-specific DNA binding GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_00578	A	A1S	Potri.001G020200	Potri.001G020200(AS)	POPTR_0001s05750	NA	NA	AT2G16770.1	| Symbols: bZIP23 | Basic-leucine zipper (bZIP) transcription factor family protein | chr2:7279859-7280817 FORWARD LENGTH=249	LOC_Os01g58760.1	protein|bZIP transcription factor domain containing protein, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0009410|response to xenobiotic stimulus GO:0010043|response to zinc ion GO:0030968|endoplasmic reticulum unfolded protein response GO:0071294|cellular response to zinc ion	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0043565|sequence-specific DNA binding GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_00579	A	A1S	Potri.001G020200	Potri.001G020200(AS)	POPTR_0001s05750	NA	NA	AT2G16770.1	| Symbols: bZIP23 | Basic-leucine zipper (bZIP) transcription factor family protein | chr2:7279859-7280817 FORWARD LENGTH=249	LOC_Os01g58760.1	protein|bZIP transcription factor domain containing protein, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0009410|response to xenobiotic stimulus GO:0010043|response to zinc ion GO:0030968|endoplasmic reticulum unfolded protein response GO:0071294|cellular response to zinc ion	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0043565|sequence-specific DNA binding GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_00580	A	A1S	Potri.001G020300	Potri.001G020300(AS)	POPTR_0001s05760	sp|Q10M00|C3H22_ORYSJ	Zinc finger CCCH domain-containing protein 22 OS=Oryza sativa subsp. japonica GN=Os03g0328900 PE=2 SV=2	AT3G51950.2	| Symbols: | Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein | chr3:19278244-19280407 REVERSE LENGTH=540	LOC_Os03g21140.2	protein|RNA-binding zinc finger protein, putative, expressed	IMGA|Medtr5g008900.1	Zinc finger CCCH domain-containing protein chr5 1751944-1756293 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0008150|biological_process	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding GO:0008270|zinc ion binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00581	A	A1S	Potri.001G020400	Potri.001G020400(AS)	POPTR_0001s05770	sp|Q766C2|NEP2_NEPGR	Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1	AT2G03200.1	| Symbols: | Eukaryotic aspartyl protease family protein | chr2:966506-967891 REVERSE LENGTH=461	LOC_Os07g34920.1	protein|aspartic proteinase nepenthesin precursor, putative, expressed	IMGA|Medtr5g044770.1	Aspartic proteinase nepenthesin-1 chr5 19234515-19233220 H EGN_Mt100125 20111014	GO:0000041|transition metal ion transport GO:0006508|proteolysis GO:0010228|vegetative to reproductive phase transition of meristem GO:0010413|glucuronoxylan metabolic process GO:0016926|protein desumoylation GO:0045492|xylan biosynthetic process GO:0050665|hydrogen peroxide biosynthetic process	GO:0004190|aspartic-type endopeptidase activity	GO:0005576|extracellular region
pt2_00582	A	A1S	Potri.001G020500	Potri.001G020500(AS)	POPTR_0001s05780	sp|Q9LQQ1|PPR20_ARATH	Pentatricopeptide repeat-containing protein At1g07740, mitochondrial OS=Arabidopsis thaliana GN=At1g07740 PE=2 SV=1	AT1G07740.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:2399117-2400496 REVERSE LENGTH=459	LOC_Os05g47510.1	protein|pentatricopeptide, putative, expressed	IMGA|Medtr5g007250.1	Pentatricopeptide repeat-containing protein chr5 1020898-1025108 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_00583	A	A1S	Potri.001G020600	Potri.001G020600(AS)	POPTR_0001s05790	sp|O22218|ACA4_ARATH	Calcium-transporting ATPase 4, plasma membrane-type OS=Arabidopsis thaliana GN=ACA4 PE=1 SV=1	AT2G41560.1	| Symbols: ACA4 | autoinhibited Ca(2+)-ATPase, isoform 4 | chr2:17332256-17337179 REVERSE LENGTH=1030	LOC_Os12g04220.1	protein|calcium-transporting ATPase, plasma membrane-type, putative, expressed	IMGA|Medtr5g015590.1	"Calcium-transporting ATPase 2, plasma membrane-type" chr5 5159662-5165001 E EGN_Mt100125 20111014	GO:0006754|ATP biosynthetic process GO:0006812|cation transport GO:0006816|calcium ion transport GO:0006882|cellular zinc ion homeostasis GO:0006970|response to osmotic stress GO:0008152|metabolic process GO:0009624|response to nematode GO:0009651|response to salt stress GO:0042742|defense response to bacterium GO:0043069|negative regulation of programmed cell death GO:0055081|anion homeostasis GO:0070588|calcium ion transmembrane transport	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0005388|calcium-transporting ATPase activity GO:0005516|calmodulin binding GO:0005524|ATP binding GO:0015662|ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism GO:0046872|metal ion binding	GO:0000325|plant-type vacuole GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0009507|chloroplast GO:0009705|plant-type vacuole membrane GO:0016020|membrane
pt2_00584	A	A1S	Potri.001G020700	Potri.001G020700(AS)	POPTR_0001s05810	NA	NA	AT5G13470.1	| Symbols: | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:4318562-4319720 FORWARD LENGTH=159	NA	NA	NA	NA	GO:0006661|phosphatidylinositol biosynthetic process GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00585	A	A1S	Potri.001G020800	Potri.001G020800(AS)	POPTR_0001s05820	sp|Q8KG76|GPDA_CHLTE	Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Chlorobium tepidum (strain ATCC 49652 / DSM 12025 / TLS) GN=gpsA PE=3 SV=1	AT2G41540.3	| Symbols: GPDHC1 | 6-phosphogluconate dehydrogenase family protein | chr2:17326801-17328654 FORWARD LENGTH=462	LOC_Os01g71280.1	protein|glycerol-3-phosphate dehydrogenase, putative, expressed	NA	NA	GO:0005975|carbohydrate metabolic process GO:0006072|glycerol-3-phosphate metabolic process GO:0009413|response to flooding GO:0046168|glycerol-3-phosphate catabolic process GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0004367|glycerol-3-phosphate dehydrogenase [NAD+] activity GO:0016491|oxidoreductase activity GO:0016614|oxidoreductase activity, acting on CH-OH group of donors GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0050662|coenzyme binding GO:0051287|NAD binding	GO:0005737|cytoplasm GO:0005829|cytosol GO:0009331|glycerol-3-phosphate dehydrogenase complex
pt2_00586	A	A1S	Potri.001G020900	Potri.001G020900(AS)	POPTR_0001s05830	sp|Q9LY71|CKX6_ARATH	Cytokinin dehydrogenase 6 OS=Arabidopsis thaliana GN=CKX6 PE=2 SV=2	AT3G63440.1	| Symbols: ATCKX6, CKX6, ATCKX7 | cytokinin oxidase/dehydrogenase 6 | chr3:23424291-23426265 FORWARD LENGTH=533	LOC_Os05g31040.1	protein|cytokinin dehydrogenase precursor, putative, expressed	IMGA|Medtr1g015410.1	Cytokinin dehydrogenase chr1 4243565-4248963 F EGN_Mt100125 20111014	GO:0009690|cytokinin metabolic process GO:0009823|cytokinin catabolic process GO:0010103|stomatal complex morphogenesis GO:0055114|oxidation-reduction process	GO:0003824|catalytic activity GO:0008762|UDP-N-acetylmuramate dehydrogenase activity GO:0016491|oxidoreductase activity GO:0016614|oxidoreductase activity, acting on CH-OH group of donors GO:0019139|cytokinin dehydrogenase activity GO:0050660|flavin adenine dinucleotide binding	GO:0005576|extracellular region
pt2_00587	A	A1S	Potri.001G021000	Potri.001G021000(AS)	POPTR_0001s05840	sp|Q8LPG9|IQD14_ARATH	Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana GN=IQD14 PE=1 SV=1	AT5G13460.1	| Symbols: IQD11 | IQ-domain 11 | chr5:4316323-4318247 FORWARD LENGTH=443	LOC_Os03g23960.1	protein|IQ calmodulin-binding motif family protein, putative, expressed	IMGA|AC225481_1.1	IQ domain-containing protein AC225481.15 5962-2486 E EGN_Mt100125 20111014	GO:0000271|polysaccharide biosynthetic process GO:0008150|biological_process	GO:0005516|calmodulin binding	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_00588	A	A1S	Potri.001G021100	Potri.001G021100(AS)	POPTR_0001s05850	NA	NA	AT3G51940.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G03990.1); Has 215 Blast hits to 164 proteins in 38 species: Archae - 0; Bacteria - 35; Metazoa - 16; Fungi - 18; Plants - 121; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). | chr3:19273708-19275157 REVERSE LENGTH=453	LOC_Os01g58700.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00589	C	C1S	Potri.001G021400	Potri.001G021400(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00590	A	A1S	Potri.001G021500	Potri.001G021500(AS)	POPTR_0001s05870	NA	NA	NA	NA	NA	NA	NA	NA	GO:0009733|response to auxin stimulus GO:0009736|cytokinin mediated signaling pathway GO:0009741|response to brassinosteroid stimulus GO:0010540|basipetal auxin transport GO:0010541|acropetal auxin transport	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00591	A	A1S	Potri.001G021600	Potri.001G021600(AS)	POPTR_0001s05880	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_00592	C	C1S	Potri.001G021700	Potri.001G021700(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00593	A	A2S	Potri.001G021800	Potri.001G021800(AS) Potri.001G022000(DS)	POPTR_0001s05900	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00594	G	G4	NA	NA	POPTR_0001s05910	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00595	A	A2S	Potri.001G021900	Potri.001G021900(AS) Potri.001G022100(BS)	POPTR_0001s05915	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00596	A	A1S	Potri.001G022000	Potri.001G022000(AS)	POPTR_0001s05930	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00597	A	A2S	Potri.001G022100	Potri.001G022100(AS) Potri.001G021900(BS)	POPTR_0001s05940	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00598	A	A1S	Potri.001G022200	Potri.001G022200(AS)	POPTR_0001s05950	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00599	A	A1S	Potri.001G022300	Potri.001G022300(AS)	POPTR_0001s05960	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00600	A	A1S	Potri.001G022400	Potri.001G022400(AS)	POPTR_0001s05970	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_00601	A	A1S	Potri.001G022500	Potri.001G022500(AS)	POPTR_0001s05980	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006661|phosphatidylinositol biosynthetic process GO:0010190|cytochrome b6f complex assembly	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0042651|thylakoid membrane
pt2_00602	G	G1	NA	NA	POPTR_0001s05990	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00603	A	A1S	Potri.001G022700	Potri.001G022700(AS)	POPTR_0001s06000	NA	NA	AT3G08550.1	| Symbols: ELD1, ABI8, KOB1 | elongation defective 1 protein / ELD1 protein | chr3:2596513-2599515 FORWARD LENGTH=533	LOC_Os01g13200.1	protein|abscisic acid insensitive 8, putative, expressed	NA	NA	GO:0006084|acetyl-CoA metabolic process GO:0009663|plasmodesma organization GO:0009737|response to abscisic acid stimulus GO:0009744|response to sucrose stimulus GO:0009749|response to glucose stimulus GO:0009750|response to fructose stimulus GO:0009826|unidimensional cell growth GO:0009831|plant-type cell wall modification involved in multidimensional cell growth GO:0016126|sterol biosynthetic process GO:0016132|brassinosteroid biosynthetic process GO:0030244|cellulose biosynthetic process GO:0048193|Golgi vesicle transport	GO:0016757|transferase activity, transferring glycosyl groups	GO:0005737|cytoplasm GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009543|chloroplast thylakoid lumen
pt2_00604	A	A2S	Potri.001G022800	Potri.001G022800(AS) Potri.009G091500(AS)	POPTR_0001s06010	sp|Q9LRR4|R13L1_ARATH	Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana GN=RPPL1 PE=2 SV=1	AT3G14470.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr3:4857940-4861104 FORWARD LENGTH=1054	LOC_Os05g41290.1	protein|disease resistance RPP13-like protein 1, putative, expressed	IMGA|Medtr5g095910.1	NB-LRR type disease resistance protein Rps1-k-2 chr5 40893619-40897389 H EGN_Mt100125 20111014	GO:0006952|defense response	GO:0043531|ADP binding	GO:0005634|nucleus
pt2_00605	A	A1S	Potri.001G022900	Potri.001G022900(AS)	POPTR_0001s06020	sp|Q8MY12|MHCKC_DICDI	Myosin heavy chain kinase C OS=Dictyostelium discoideum GN=mhkC PE=1 SV=1	AT3G51930.1	| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr3:19271672-19272919 FORWARD LENGTH=415	LOC_Os01g71780.1	protein|WD domain, G-beta repeat domain containing protein, expressed	IMGA|Medtr5g018520.1	Guanine nucleotide-binding protein subunit beta-like protein chr5 6660942-6659569 H EGN_Mt100125 20111014	NA	GO:0000166|nucleotide binding	GO:0005634|nucleus GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_00606	A	A1S	Potri.001G023000	Potri.001G023000(AS)	POPTR_0001s06030	NA	NA	AT5G18250.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:6033797-6035216 FORWARD LENGTH=133	LOC_Os01g15979.1	protein|gb protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_00607	A	A1S	Potri.001G023100	Potri.001G023100(AS)	POPTR_0001s06040	sp|Q94AR4|CID2_ARATH	Polyadenylate-binding protein-interacting protein 2 OS=Arabidopsis thaliana GN=CID2 PE=1 SV=1	AT4G14270.2	| Symbols: | Protein containing PAM2 motif which mediates interaction with the PABC domain of polyadenyl binding proteins. | chr4:8218517-8219037 FORWARD LENGTH=141	LOC_Os03g23010.4	protein|expressed protein	IMGA|Medtr5g083690.1	Polyadenylate-binding protein-interacting protein chr5 35093982-35095007 F EGN_Mt100125 20111014	GO:0006096|glycolysis GO:0006833|water transport GO:0006972|hyperosmotic response GO:0007030|Golgi organization GO:0009266|response to temperature stimulus GO:0009414|response to water deprivation GO:0009617|response to bacterium GO:0009644|response to high light intensity GO:0009646|response to absence of light GO:0009651|response to salt stress GO:0032880|regulation of protein localization GO:0042744|hydrogen peroxide catabolic process GO:0046686|response to cadmium ion	GO:0005515|protein binding	GO:0005737|cytoplasm
pt2_00608	A	A1S	Potri.001G023200	Potri.001G023200(AS)	POPTR_0001s06050	NA	NA	AT4G30880.1	| Symbols: | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr4:15035229-15035750 FORWARD LENGTH=109	LOC_Os01g58660.1	protein|LTPL29 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	IMGA|Medtr5g093780.1	hypothetical protein chr5 39906390-39907105 F EGN_Mt100125 20111014	GO:0006869|lipid transport	GO:0008289|lipid binding	GO:0005576|extracellular region
pt2_00609	A	A1S	Potri.001G023300	Potri.001G023300(AS)	POPTR_0001s06060	NA	NA	AT4G30880.1	| Symbols: | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr4:15035229-15035750 FORWARD LENGTH=109	LOC_Os01g58660.1	protein|LTPL29 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	IMGA|Medtr5g093780.1	hypothetical protein chr5 39906390-39907105 F EGN_Mt100125 20111014	GO:0006869|lipid transport	GO:0008289|lipid binding	GO:0005576|extracellular region
pt2_00610	A	A1S	Potri.001G023400	Potri.001G023400(AS)	POPTR_0001s06070	sp|Q5MAU8|PPA27_ARATH	Probable inactive purple acid phosphatase 27 OS=Arabidopsis thaliana GN=PAP27 PE=2 SV=1	AT5G50400.1	| Symbols: ATPAP27, PAP27 | purple acid phosphatase 27 | chr5:20523575-20526231 REVERSE LENGTH=611	LOC_Os01g58640.1	protein|nucleotide pyrophosphatase/phosphodiesterase, putative, expressed	IMGA|Medtr5g045600.1	U-box domain-containing protein chr5 19595084-19586387 E EGN_Mt100125 20111014	NA	GO:0003993|acid phosphatase activity GO:0004722|protein serine/threonine phosphatase activity GO:0016787|hydrolase activity GO:0046872|metal ion binding	GO:0005576|extracellular region
pt2_00611	A	A1S	Potri.001G023500	Potri.001G023500(AS)	POPTR_0001s06090	sp|Q9LPR8|SCL3_ARATH	Scarecrow-like protein 3 OS=Arabidopsis thaliana GN=SCL3 PE=2 SV=1	AT1G50420.1	| Symbols: SCL3, SCL-3 | scarecrow-like 3 | chr1:18678177-18679625 REVERSE LENGTH=482	LOC_Os01g71970.1	protein|GRAS family transcription factor containing protein, expressed	IMGA|Medtr5g009080.1	GRAS family transcription factor chr5 1849786-1848061 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009739|response to gibberellin stimulus	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00612	A	A1S	Potri.001G023600	Potri.001G023600(AS)	POPTR_0001s06100	NA	NA	AT5G49040.1	| Symbols: | Disease resistance-responsive (dirigent-like protein) family protein | chr5:19882676-19883251 REVERSE LENGTH=191	LOC_Os11g07670.1	protein|dirigent, putative, expressed	IMGA|Medtr5g096120.1	Disease resistance response protein chr5 40986916-40987485 H EGN_Mt100125 20111014	GO:0006598|polyamine catabolic process GO:0006952|defense response GO:0009698|phenylpropanoid metabolic process GO:0009807|lignan biosynthetic process GO:0042398|cellular modified amino acid biosynthetic process	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_00613	A	A1S	Potri.001G023700	Potri.001G023700(AS)	POPTR_0001s06110	NA	NA	AT5G42510.1	| Symbols: | Disease resistance-responsive (dirigent-like protein) family protein | chr5:16998268-16998816 REVERSE LENGTH=182	NA	NA	NA	NA	GO:0006952|defense response GO:0009807|lignan biosynthetic process	GO:0003674|molecular_function	GO:0005576|extracellular region GO:0005618|cell wall
pt2_00614	A	A1S	Potri.001G023800	Potri.001G023800(AS)	POPTR_0001s06120	sp|P13240|DR206_PEA	Disease resistance response protein 206 OS=Pisum sativum GN=PI206 PE=2 SV=2	AT3G13650.1	| Symbols: | Disease resistance-responsive (dirigent-like protein) family protein | chr3:4463056-4463616 FORWARD LENGTH=186	LOC_Os11g07830.1	protein|dirigent, putative, expressed	IMGA|Medtr5g096120.1	Disease resistance response protein chr5 40986916-40987485 H EGN_Mt100125 20111014	GO:0006598|polyamine catabolic process GO:0006952|defense response GO:0009698|phenylpropanoid metabolic process GO:0009807|lignan biosynthetic process GO:0042398|cellular modified amino acid biosynthetic process	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_00615	A	A1S	Potri.001G023900	Potri.001G023900(AS)	POPTR_0001s06130	NA	NA	AT1G29050.1	| Symbols: TBL38 | TRICHOME BIREFRINGENCE-LIKE 38 | chr1:10136376-10139082 REVERSE LENGTH=380	LOC_Os01g46350.1	protein| proteins of unknown function domain containing protein, expressed	IMGA|Medtr5g034810.1	hypothetical protein chr5 14683254-14687305 H EGN_Mt100125 20111014	GO:0008150|biological_process	NA	NA
pt2_00616	A	A1S	Potri.001G024000	Potri.001G024000(AS)	POPTR_0001s06140	NA	NA	AT1G34570.1	| Symbols: | Essential protein Yae1, N-terminal | chr1:12655297-12656444 REVERSE LENGTH=208	LOC_Os01g72200.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_00617	A	A2S	Potri.001G024100	Potri.001G024100(AS) Potri.003G201400(DS)	POPTR_0001s06150	NA	NA	AT2G38800.1	| Symbols: | Plant calmodulin-binding protein-related | chr2:16216999-16218837 FORWARD LENGTH=612	LOC_Os05g31690.1	protein|expressed protein	NA	NA	GO:0015996|chlorophyll catabolic process	GO:0005516|calmodulin binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00618	A	A1S	Potri.001G024200	Potri.001G024200(AS)	POPTR_0001s06160	NA	NA	AT2G38780.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 58 Blast hits to 58 proteins in 23 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). | chr2:16210864-16214110 FORWARD LENGTH=465	LOC_Os05g31680.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_00619	A	A1S	Potri.001G024300	Potri.001G024300(AS)	POPTR_0001s06170	sp|Q9C826|ABA2_ARATH	Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN=ABA2 PE=1 SV=1	AT1G52340.1	| Symbols: ABA2, SIS4, GIN1, SDR1, ISI4, SRE1, ATABA2, ATSDR1 | NAD(P)-binding Rossmann-fold superfamily protein | chr1:19489997-19491527 REVERSE LENGTH=285	LOC_Os03g59610.1	protein|oxidoreductase, short chain dehydrogenase/reductase family protein, putative, expressed	IMGA|Medtr1g007800.1	Alcohol dehydrogenase chr1 1138955-1134820 F EGN_Mt100125 20111014	GO:0006561|proline biosynthetic process GO:0008152|metabolic process GO:0009408|response to heat GO:0009414|response to water deprivation GO:0009688|abscisic acid biosynthetic process GO:0009750|response to fructose stimulus GO:0010115|regulation of abscisic acid biosynthetic process GO:0010182|sugar mediated signaling pathway	GO:0000166|nucleotide binding GO:0004022|alcohol dehydrogenase (NAD) activity GO:0010301|xanthoxin dehydrogenase activity GO:0016491|oxidoreductase activity	GO:0005829|cytosol
pt2_00620	B	B1S	Potri.001G024400	Potri.001G024400(BS)	POPTR_0001s06180	sp|O60306|AQR_HUMAN	Intron-binding protein aquarius OS=Homo sapiens GN=AQR PE=1 SV=4	AT2G38770.1	| Symbols: EMB2765 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr2:16203185-16210253 REVERSE LENGTH=1509	LOC_Os03g26960.1	protein|intron-binding protein aquarius, putative, expressed	NA	NA	NA	NA	GO:0005634|nucleus GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_00621	A	A1S	Potri.001G024500	Potri.001G024500(AS)	POPTR_0001s06190	sp|Q5PQR5|IMP4_RAT	U3 small nucleolar ribonucleoprotein protein IMP4 OS=Rattus norvegicus GN=Imp4 PE=2 SV=1	AT1G63780.1	| Symbols: IMP4 | Ribosomal RNA processing Brix domain protein | chr1:23665045-23667243 REVERSE LENGTH=294	LOC_Os08g05880.1	protein|Brix domain containing protein, putative, expressed	NA	NA	GO:0000478|endonucleolytic cleavage involved in rRNA processing GO:0001510|RNA methylation GO:0006364|rRNA processing	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005730|nucleolus GO:0005732|small nucleolar ribonucleoprotein complex GO:0015030|Cajal body GO:0016363|nuclear matrix
pt2_00622	A	A1S	Potri.001G024600	Potri.001G024600(AS)	POPTR_0001s06200	sp|Q9LM76|PUB44_ARATH	U-box domain-containing protein 44 OS=Arabidopsis thaliana GN=PUB44 PE=1 SV=1	AT1G20780.1	| Symbols: PUB44, ATPUB44, SAUL1 | senescence-associated E3 ubiquitin ligase 1 | chr1:7217812-7220609 FORWARD LENGTH=801	LOC_Os01g72000.1	protein|armadillo repeat-containing protein, putative, expressed	IMGA|contig_56658_1.1	U-box domain-containing protein contig_56658 130-4641 F PREDN 20111014	GO:0016567|protein ubiquitination	GO:0004842|ubiquitin-protein ligase activity	GO:0000151|ubiquitin ligase complex GO:0005737|cytoplasm GO:0005886|plasma membrane
pt2_00623	A	A1S	Potri.001G024800	Potri.001G024800(AS)	POPTR_0001s06210	sp|Q9SE45|ANXD3_ARATH	Annexin D3 OS=Arabidopsis thaliana GN=ANN3 PE=2 SV=2	AT2G38760.1	| Symbols: ANNAT3, ANN3 | annexin 3 | chr2:16201086-16202490 FORWARD LENGTH=321	LOC_Os05g31760.1	protein|annexin, putative, expressed	IMGA|Medtr5g063670.1	Annexin chr5 25680904-25678394 F EGN_Mt100125 20111014	GO:0009408|response to heat GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009651|response to salt stress	GO:0005509|calcium ion binding GO:0005544|calcium-dependent phospholipid binding	GO:0005773|vacuole GO:0009507|chloroplast GO:0009986|cell surface
pt2_00624	A	A1S	Potri.001G024900	Potri.001G024900(AS)	POPTR_0001s06220	sp|Q9ZVJ6|ANXD4_ARATH	Annexin D4 OS=Arabidopsis thaliana GN=ANN4 PE=2 SV=1	AT2G38750.1	| Symbols: ANNAT4 | annexin 4 | chr2:16196582-16198431 REVERSE LENGTH=319	LOC_Os05g31750.1	protein|annexin, putative, expressed	IMGA|Medtr5g063670.1	Annexin chr5 25680904-25678394 F EGN_Mt100125 20111014	GO:0006970|response to osmotic stress GO:0009408|response to heat GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009651|response to salt stress GO:0009737|response to abscisic acid stimulus	GO:0005509|calcium ion binding GO:0005544|calcium-dependent phospholipid binding	GO:0009506|plasmodesma GO:0009507|chloroplast GO:0009986|cell surface
pt2_00625	B	B1S	Potri.003G200700	Potri.003G200700(BS)	POPTR_0001s06230	sp|P51074|ANX4_FRAAN	Annexin-like protein RJ4 OS=Fragaria ananassa PE=2 SV=2	AT5G12380.1	| Symbols: ANNAT8 | annexin 8 | chr5:4009223-4010687 FORWARD LENGTH=316	LOC_Os06g11800.1	protein|annexin, putative, expressed	IMGA|Medtr5g063670.1	Annexin chr5 25680904-25678394 F EGN_Mt100125 20111014	GO:0009408|response to heat GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009651|response to salt stress	GO:0005509|calcium ion binding GO:0005544|calcium-dependent phospholipid binding	GO:0005634|nucleus
pt2_00626	B	B1S	Potri.001G025100	Potri.001G025100(BS)	POPTR_0001s06240	NA	NA	AT3G54500.1	| Symbols: | BEST Arabidopsis thaliana protein match is: dentin sialophosphoprotein-related (TAIR:AT5G64170.1); Has 183 Blast hits to 175 proteins in 44 species: Archae - 0; Bacteria - 4; Metazoa - 38; Fungi - 11; Plants - 120; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). | chr3:20175792-20178737 REVERSE LENGTH=648	LOC_Os01g31360.6	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00627	A	A1S	Potri.001G025100	Potri.001G025100(AS)	POPTR_0001s06240	NA	NA	AT3G54500.1	| Symbols: | BEST Arabidopsis thaliana protein match is: dentin sialophosphoprotein-related (TAIR:AT5G64170.1); Has 183 Blast hits to 175 proteins in 44 species: Archae - 0; Bacteria - 4; Metazoa - 38; Fungi - 11; Plants - 120; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). | chr3:20175792-20178737 REVERSE LENGTH=648	LOC_Os01g31360.6	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00628	A	A2S	Potri.001G025100	Potri.001G025100(AS) Potri.003G200600(DS)	POPTR_0001s06240	NA	NA	AT3G54500.1	| Symbols: | BEST Arabidopsis thaliana protein match is: dentin sialophosphoprotein-related (TAIR:AT5G64170.1); Has 183 Blast hits to 175 proteins in 44 species: Archae - 0; Bacteria - 4; Metazoa - 38; Fungi - 11; Plants - 120; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). | chr3:20175792-20178737 REVERSE LENGTH=648	LOC_Os01g31360.6	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00629	A	A1S	Potri.001G025100	Potri.001G025100(AS)	POPTR_0001s06240	NA	NA	AT3G54500.1	| Symbols: | BEST Arabidopsis thaliana protein match is: dentin sialophosphoprotein-related (TAIR:AT5G64170.1); Has 183 Blast hits to 175 proteins in 44 species: Archae - 0; Bacteria - 4; Metazoa - 38; Fungi - 11; Plants - 120; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). | chr3:20175792-20178737 REVERSE LENGTH=648	LOC_Os01g31360.6	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00630	A	A1S	Potri.001G025200	Potri.001G025200(AS)	POPTR_0001s06250	sp|Q9FXW4|C80B2_COPJA	Probable (S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Coptis japonica GN=CYP80B2 PE=2 SV=1	AT1G33720.1	| Symbols: CYP76C6 | cytochrome P450, family 76, subfamily C, polypeptide 6 | chr1:12220957-12223981 REVERSE LENGTH=511	LOC_Os03g14400.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g007460.1	Cytochrome P450 monooxygenase chr5 1131766-1133659 E EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005783|endoplasmic reticulum
pt2_00631	A	A1S	Potri.001G025300	Potri.001G025300(AS)	POPTR_0001s06260	sp|P62981|RS27A_SOLTU	Ubiquitin-40S ribosomal protein S27a OS=Solanum tuberosum GN=UBI3 PE=2 SV=2	AT2G47110.2	| Symbols: UBQ6 | ubiquitin 6 | chr2:19344701-19345174 FORWARD LENGTH=157	LOC_Os01g22490.1	protein|40S ribosomal protein S27a, putative, expressed	IMGA|Medtr5g033960.1	Ubiquitin chr5 14250866-14251520 F EGN_Mt100125 20111014	GO:0006412|translation GO:0006511|ubiquitin-dependent protein catabolic process GO:0042787|protein ubiquitination involved in ubiquitin-dependent protein catabolic process	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005794|Golgi apparatus GO:0005840|ribosome GO:0022627|cytosolic small ribosomal subunit
pt2_00632	A	A1S	Potri.001G025400	Potri.001G025400(AS)	POPTR_0001s06270	sp|Q7XA40|RGA3_SOLBU	Putative disease resistance protein RGA3 OS=Solanum bulbocastanum GN=RGA3 PE=2 SV=2	AT3G14470.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr3:4857940-4861104 FORWARD LENGTH=1054	LOC_Os05g41290.1	protein|disease resistance RPP13-like protein 1, putative, expressed	IMGA|Medtr5g035280.1	NBS-LRR disease resistance-like protein chr5 14922475-14918159 E EGN_Mt100125 20111014	GO:0006952|defense response GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process	GO:0005515|protein binding GO:0043531|ADP binding	GO:0005576|extracellular region
pt2_00633	A	A1S	Potri.001G025500	Potri.001G025500(AS)	POPTR_0001s06280	sp|A8XGH1|RPAB1_CAEBR	DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Caenorhabditis briggsae GN=rpb-5 PE=3 SV=1	AT3G54490.1	| Symbols: RPB5E | RNA polymerase II fifth largest subunit, E | chr3:20173673-20175297 FORWARD LENGTH=233	LOC_Os12g04510.1	protein|DNA-directed RNA polymerases I, II, and III subunit RPABC1, putative, expressed	IMGA|Medtr5g005470.1	"DNA-directed RNA polymerases I, II, and III subunit RPABC1" chr5 226625-231507 E EGN_Mt100125 20111014	GO:0006351|transcription, DNA-dependent	GO:0003677|DNA binding GO:0003899|DNA-directed RNA polymerase activity	GO:0005634|nucleus
pt2_00634	A	A2S	Potri.001G025600	Potri.001G025600(AS) Potri.T153900(BS)	POPTR_0001s06290	sp|Q94FT2|SKIP5_ARATH	F-box protein SKIP5 OS=Arabidopsis thaliana GN=SKIP5 PE=1 SV=1	AT3G54480.1	| Symbols: SKIP5, SKP5 | SKP1/ASK-interacting protein 5 | chr3:20170883-20173325 REVERSE LENGTH=274	LOC_Os07g46555.1	protein|F-box domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_00635	A	A2S	Potri.001G025700	Potri.001G025700(AS) Potri.T154000(BS)	POPTR_0001s06300	sp|Q9SCV5|BGAL7_ARATH	Beta-galactosidase 7 OS=Arabidopsis thaliana GN=BGAL7 PE=2 SV=2	AT5G20710.1	| Symbols: BGAL7 | beta-galactosidase 7 | chr5:7010536-7013994 FORWARD LENGTH=826	LOC_Os01g34920.1	protein|beta-galactosidase precursor, putative, expressed	IMGA|Medtr5g024080.1	Beta-galactosidase chr5 9385294-9387714 H EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0005990|lactose catabolic process GO:0019513|lactose catabolic process, using glucoside 3-dehydrogenase GO:0019515|lactose catabolic process via UDP-galactose	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0004565|beta-galactosidase activity GO:0030246|carbohydrate binding GO:0043169|cation binding	GO:0005576|extracellular region
pt2_00636	A	A1S	Potri.001G025800	Potri.001G025800(AS)	POPTR_0001s06310	sp|Q9C6W4|BGA15_ARATH	Beta-galactosidase 15 OS=Arabidopsis thaliana GN=BGAL15 PE=2 SV=1	AT5G20710.1	| Symbols: BGAL7 | beta-galactosidase 7 | chr5:7010536-7013994 FORWARD LENGTH=826	LOC_Os01g34920.1	protein|beta-galactosidase precursor, putative, expressed	IMGA|Medtr5g024080.1	Beta-galactosidase chr5 9385294-9387714 H EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0005990|lactose catabolic process GO:0019513|lactose catabolic process, using glucoside 3-dehydrogenase GO:0019515|lactose catabolic process via UDP-galactose	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0004565|beta-galactosidase activity GO:0030246|carbohydrate binding GO:0043169|cation binding	GO:0005576|extracellular region
pt2_00637	A	A1S	Potri.001G025900	Potri.001G025900(AS)	POPTR_0001s06320	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00638	A	A1S	Potri.001G026000	Potri.001G026000(AS)	POPTR_0001s06330	NA	NA	AT3G14180.1	| Symbols: | sequence-specific DNA binding transcription factors | chr3:4707290-4708621 REVERSE LENGTH=443	LOC_Os04g36790.1	protein|transcription factor like protein, putative, expressed	IMGA|contig_83346_1.1	Transcription regulation protein contig_83346 3217-606 E PREDN 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009793|embryo development ending in seed dormancy GO:0010431|seed maturation GO:0043687|post-translational protein modification GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00639	A	A1S	Potri.001G026100	Potri.001G026100(AS)	POPTR_0001s06340	sp|Q54EY2|EI2BB_DICDI	Translation initiation factor eIF-2B subunit beta OS=Dictyostelium discoideum GN=eif2b2 PE=3 SV=1	AT3G07300.3	| Symbols: | NagB/RpiA/CoA transferase-like superfamily protein | chr3:2324967-2327380 REVERSE LENGTH=409	LOC_Os10g25320.1	protein|initiation factor 2 subunit family domain containing protein, expressed	IMGA|Medtr5g031790.1	Translation initiation factor eIF-2B subunit beta chr5 13213079-13204458 E EGN_Mt100125 20111014	GO:0006413|translational initiation GO:0006446|regulation of translational initiation GO:0044237|cellular metabolic process GO:0050790|regulation of catalytic activity	GO:0003743|translation initiation factor activity GO:0005085|guanyl-nucleotide exchange factor activity GO:0005525|GTP binding	GO:0005634|nucleus GO:0005851|eukaryotic translation initiation factor 2B complex
pt2_00640	A	A1S	Potri.001G026200	Potri.001G026200(AS)	POPTR_0001s06350	sp|Q8S3N1|SINA5_ARATH	E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana GN=SINAT5 PE=1 SV=2	AT3G61790.1	| Symbols: | Protein with RING/U-box and TRAF-like domains | chr3:22871974-22873543 REVERSE LENGTH=326	LOC_Os07g46560.1	protein|seven in absentia protein family domain containing protein, expressed	IMGA|Medtr5g076720.1	Ubiquitin chr5 31737740-31741388 H EGN_Mt100125 20111014	GO:0006511|ubiquitin-dependent protein catabolic process GO:0007275|multicellular organismal development GO:0016567|protein ubiquitination	GO:0004842|ubiquitin-protein ligase activity GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_00641	A	A2S	Potri.001G026300	Potri.001G026300(AS) Potri.003G198500(DS)	POPTR_0001s06360	sp|Q42586|UMPS_ARATH	Uridine 5'-monophosphate synthase OS=Arabidopsis thaliana GN=PYRE-F PE=2 SV=2	AT3G54470.1	| Symbols: | uridine 5'-monophosphate synthase / UMP synthase (PYRE-F) (UMPS) | chr3:20168285-20170245 REVERSE LENGTH=476	LOC_Os01g72240.1	protein|uridine 5-monophosphate synthase, putative, expressed	IMGA|AC225458_1.1	Orotidine 5'-phosphate decarboxylase AC225458.11 5300-3126 H EGN_Mt100125 20111014	GO:0006207|'de novo' pyrimidine nucleobase biosynthetic process GO:0006221|pyrimidine nucleotide biosynthetic process GO:0008152|metabolic process GO:0009116|nucleoside metabolic process GO:0009220|pyrimidine ribonucleotide biosynthetic process GO:0016036|cellular response to phosphate starvation GO:0044205|'de novo' UMP biosynthetic process GO:0046686|response to cadmium ion	GO:0003824|catalytic activity GO:0004588|orotate phosphoribosyltransferase activity GO:0004590|orotidine-5'-phosphate decarboxylase activity	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_00642	A	A1S	Potri.001G026400	Potri.001G026400(AS)	POPTR_0001s06370	sp|Q8L7A4|AGD11_ARATH	Probable ADP-ribosylation factor GTPase-activating protein AGD11 OS=Arabidopsis thaliana GN=AGD11 PE=2 SV=1	AT3G07940.1	| Symbols: | Calcium-dependent ARF-type GTPase activating protein family | chr3:2529542-2531368 FORWARD LENGTH=385	LOC_Os01g72230.1	protein|stromal membrane-associated protein, putative, expressed	IMGA|contig_14696_1.1	C2 domain-containing protein-like protein contig_14696 1703-414 E PREDN 20111014	GO:0032312|regulation of ARF GTPase activity	GO:0008060|ARF GTPase activator activity GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_00643	A	A2S	Potri.001G026500	Potri.001G026500(AS) Potri.003G198200(DS)	POPTR_0001s06380	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006796|phosphate-containing compound metabolic process	NA	NA
pt2_00644	A	A2S	Potri.001G026600	Potri.001G026600(AS) Potri.003G198100(DS)	POPTR_0001s06390	sp|Q9FLE8|Y5986_ARATH	Uncharacterized protein At5g39865 OS=Arabidopsis thaliana GN=At5g39865 PE=1 SV=1	AT5G13810.1	| Symbols: | Glutaredoxin family protein | chr5:4455769-4456593 FORWARD LENGTH=274	LOC_Os03g24030.1	protein|glutaredoxin, putative, expressed	IMGA|Medtr5g083110.1	hypothetical protein chr5 34849068-34848285 E EGN_Mt100125 20111014	GO:0045454|cell redox homeostasis	GO:0009055|electron carrier activity GO:0015035|protein disulfide oxidoreductase activity	GO:0005634|nucleus
pt2_00645	A	A1S	Potri.001G026700	Potri.001G026700(AS)	POPTR_0001s06400	sp|Q8GWZ6|SRR1_ARATH	Protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Arabidopsis thaliana GN=SRR1 PE=2 SV=2	AT5G59560.2	| Symbols: SRR1 | sensitivity to red light reduced protein (SRR1) | chr5:24000747-24001574 REVERSE LENGTH=275	LOC_Os05g02690.1	protein|sensitivity to red light reduced protein 1, putative, expressed	NA	NA	GO:0007623|circadian rhythm GO:0009585|red, far-red light phototransduction GO:0010017|red or far-red light signaling pathway GO:0042752|regulation of circadian rhythm	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_00646	A	A1S	Potri.001G026800	Potri.001G026800(AS)	POPTR_0001s06410	sp|Q6NLV4|FY_ARATH	Flowering time control protein FY OS=Arabidopsis thaliana GN=FY PE=1 SV=1	AT5G13480.1	| Symbols: FY | Transducin/WD40 repeat-like superfamily protein | chr5:4326638-4331557 REVERSE LENGTH=647	LOC_Os01g72220.1	protein|WD domain, G-beta repeat domain containing protein, expressed	IMGA|contig_53197_1.1	Wd-repeat protein contig_53197 137-4865 E PREDN 20111014	GO:0000398|mRNA splicing, via spliceosome GO:0006355|regulation of transcription, DNA-dependent GO:0006396|RNA processing GO:0006397|mRNA processing GO:0006406|mRNA export from nucleus GO:0006470|protein dephosphorylation GO:0007062|sister chromatid cohesion GO:0009640|photomorphogenesis GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009880|embryonic pattern specification GO:0009909|regulation of flower development GO:0009933|meristem structural organization GO:0010072|primary shoot apical meristem specification GO:0010074|maintenance of meristem identity GO:0010162|seed dormancy process GO:0010182|sugar mediated signaling pathway GO:0010228|vegetative to reproductive phase transition of meristem GO:0010431|seed maturation GO:0010564|regulation of cell cycle process GO:0016567|protein ubiquitination GO:0016570|histone modification GO:0019915|lipid storage GO:0030422|production of siRNA involved in RNA interference GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0043687|post-translational protein modification GO:0045595|regulation of cell differentiation GO:0045893|positive regulation of transcription, DNA-dependent GO:0048366|leaf development GO:0048449|floral organ formation GO:0048825|cotyledon development GO:0050826|response to freezing	GO:0005515|protein binding	GO:0005634|nucleus GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_00647	A	A1S	Potri.001G026900	Potri.001G026900(AS)	POPTR_0001s06420	sp|Q15751|HERC1_HUMAN	Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1 PE=1 SV=2	AT5G19420.2	| Symbols: | Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain | chr5:6547945-6552981 REVERSE LENGTH=1139	LOC_Os05g31920.1	protein|FYVE zinc finger domain containing protein, expressed	IMGA|Medtr5g089900.1	Lateral signaling target protein-like protein chr5 38066312-38075364 E EGN_Mt100125 20111014	GO:0000956|nuclear-transcribed mRNA catabolic process	GO:0003682|chromatin binding GO:0005543|phospholipid binding GO:0008270|zinc ion binding GO:0008536|Ran GTPase binding GO:0046872|metal ion binding	GO:0005737|cytoplasm
pt2_00648	D	D1S	Potri.001G027000	Potri.001G027000(DS)	POPTR_0001s06430	sp|O80365|ARR8_ARATH	Two-component response regulator ARR8 OS=Arabidopsis thaliana GN=ARR8 PE=1 SV=1	AT2G41310.1	| Symbols: ATRR3, ARR8, RR3 | response regulator 3 | chr2:17222280-17223536 FORWARD LENGTH=225	LOC_Os11g04720.2	protein|OsRR10 type-A response regulator, expressed	IMGA|Medtr5g036480.1	Two-component response regulator ARR3 chr5 15492273-15493675 F EGN_Mt100125 20111014	GO:0000160|two-component signal transduction system (phosphorelay) GO:0006355|regulation of transcription, DNA-dependent GO:0007623|circadian rhythm GO:0009735|response to cytokinin stimulus GO:0009736|cytokinin mediated signaling pathway GO:0009740|gibberellic acid mediated signaling pathway GO:0010162|seed dormancy process	GO:0000156|two-component response regulator activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_00649	A	A1S	Potri.001G027100	Potri.001G027100(AS)	POPTR_0001s06440	sp|Q9M1I2|PTR46_ARATH	Probable peptide/nitrate transporter At3g54450 OS=Arabidopsis thaliana GN=At3g54450 PE=2 SV=1	AT3G54450.1	| Symbols: | Major facilitator superfamily protein | chr3:20158534-20161937 FORWARD LENGTH=555	LOC_Os01g04950.2	protein|peptide transporter PTR2, putative, expressed	IMGA|Medtr1g042310.1	Peptide transporter PTR3-A chr1 12093187-12087948 E EGN_Mt100125 20111014	GO:0006857|oligopeptide transport	GO:0005215|transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_00650	A	A1S	Potri.T148900	Potri.T148900(AS)	POPTR_0001s06450	sp|Q5D869|NRPE1_ARATH	DNA-directed RNA polymerase E subunit 1 OS=Arabidopsis thaliana GN=NRPE1 PE=1 SV=1	AT2G40030.1	| Symbols: NRPD1B, DRD3, ATNRPD1B, DMS5, NRPE1 | nuclear RNA polymerase D1B | chr2:16715089-16723406 FORWARD LENGTH=1976	LOC_Os02g05880.1	protein|RNA polymerase Rpb1, domain 2 family protein, expressed	IMGA|Medtr5g011000.1	DNA-directed RNA polymerase subunit beta chr5 2818055-2831436 E EGN_Mt100125 20111014	GO:0000724|double-strand break repair via homologous recombination GO:0006261|DNA-dependent DNA replication GO:0006275|regulation of DNA replication GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0006351|transcription, DNA-dependent GO:0006354|DNA-dependent transcription, elongation GO:0009555|pollen development GO:0016444|somatic cell DNA recombination GO:0016568|chromatin modification GO:0030422|production of siRNA involved in RNA interference GO:0031047|gene silencing by RNA GO:0035194|posttranscriptional gene silencing by RNA GO:0048451|petal formation GO:0048453|sepal formation GO:0051567|histone H3-K9 methylation GO:0051726|regulation of cell cycle	GO:0003677|DNA binding GO:0003899|DNA-directed RNA polymerase activity GO:0005515|protein binding	GO:0000418|DNA-directed RNA polymerase IV complex GO:0000419|DNA-directed RNA polymerase V complex GO:0005634|nucleus GO:0005730|nucleolus GO:0016604|nuclear body GO:0030880|RNA polymerase complex
pt2_00651	A	A1S	Potri.001G027200	Potri.001G027200(AS)	POPTR_0001s06460	sp|Q5D869|NRPE1_ARATH	DNA-directed RNA polymerase E subunit 1 OS=Arabidopsis thaliana GN=NRPE1 PE=1 SV=1	AT2G40030.1	| Symbols: NRPD1B, DRD3, ATNRPD1B, DMS5, NRPE1 | nuclear RNA polymerase D1B | chr2:16715089-16723406 FORWARD LENGTH=1976	LOC_Os02g05880.1	protein|RNA polymerase Rpb1, domain 2 family protein, expressed	NA	NA	GO:0000724|double-strand break repair via homologous recombination GO:0006261|DNA-dependent DNA replication GO:0006275|regulation of DNA replication GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0006351|transcription, DNA-dependent GO:0006354|DNA-dependent transcription, elongation GO:0009555|pollen development GO:0016444|somatic cell DNA recombination GO:0016568|chromatin modification GO:0030422|production of siRNA involved in RNA interference GO:0031047|gene silencing by RNA GO:0035194|posttranscriptional gene silencing by RNA GO:0048451|petal formation GO:0048453|sepal formation GO:0051567|histone H3-K9 methylation GO:0051726|regulation of cell cycle	GO:0003677|DNA binding GO:0003899|DNA-directed RNA polymerase activity GO:0005515|protein binding	GO:0000418|DNA-directed RNA polymerase IV complex GO:0000419|DNA-directed RNA polymerase V complex GO:0005634|nucleus GO:0005730|nucleolus GO:0016604|nuclear body GO:0030880|RNA polymerase complex
pt2_00652	A	A1S	Potri.001G027400	Potri.001G027400(AS)	POPTR_0001s06470	sp|A5F5U6|BGAL_VIBC3	Beta-galactosidase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=lacZ PE=3 SV=2	AT3G54440.1	| Symbols: | glycoside hydrolase family 2 protein | chr3:20148494-20157019 REVERSE LENGTH=1107	LOC_Os01g72340.1	protein|beta-galactosidase, putative, expressed	NA	NA	GO:0005975|carbohydrate metabolic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0004565|beta-galactosidase activity GO:0030246|carbohydrate binding GO:0043169|cation binding	GO:0009341|beta-galactosidase complex GO:0009507|chloroplast
pt2_00653	C	C1S	Potri.001G027500	Potri.001G027500(CS)	sp|Q9FRS6|PXL1_ARATH	Leucine-rich repeat receptor-like protein kinase PXL1 OS=Arabidopsis thaliana GN=PXL1 PE=2 SV=1	AT2G34930.1	| Symbols: | disease resistance family protein / LRR family protein | chr2:14737169-14739886 REVERSE LENGTH=905	LOC_Os10g03100.1	protein|Cf2/Cf5 disease resistance protein, putative, expressed	IMGA|Medtr5g069580.1	Receptor protein kinase-like protein chr5 28520745-28517219 H EGN_Mt100125 20111014	GO:0002237|response to molecule of bacterial origin GO:0006468|protein phosphorylation GO:0007165|signal transduction GO:0010067|procambium histogenesis GO:0010103|stomatal complex morphogenesis GO:0048443|stamen development	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_00654	A	A1S	Potri.001G027600	Potri.001G027600(AS)	POPTR_0001s06490	NA	NA	NA	NA	LOC_Os01g16620.5	protein|expressed protein	NA	NA	NA	NA	NA
pt2_00655	A	A1S	Potri.001G027700	Potri.001G027700(AS)	POPTR_0001s06500	NA	NA	AT5G12330.1	| Symbols: LRP1 | Lateral root primordium (LRP) protein-related | chr5:3987677-3989074 REVERSE LENGTH=320	LOC_Os01g72490.1	protein|LRP1, putative, expressed	IMGA|Medtr5g089750.1	Short internode related sequence chr5 37981788-37979155 E EGN_Mt100125 20111014	GO:0007155|cell adhesion GO:0009733|response to auxin stimulus GO:0010090|trichome morphogenesis GO:0045010|actin nucleation GO:0048364|root development GO:0048765|root hair cell differentiation GO:0071555|cell wall organization	GO:0042803|protein homodimerization activity	GO:0005575|cellular_component
pt2_00656	A	A1S	Potri.001G027800	Potri.001G027800(AS)	POPTR_0001s06510	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00657	A	A1S	Potri.001G027900	Potri.001G027900(AS)	POPTR_0001s06520	sp|Q9SFB8|PI5K6_ARATH	Phosphatidylinositol 4-phosphate 5-kinase 6 OS=Arabidopsis thaliana GN=PIP5K6 PE=2 SV=1	AT3G07960.1	| Symbols: | Phosphatidylinositol-4-phosphate 5-kinase family protein | chr3:2535274-2538090 FORWARD LENGTH=715	LOC_Os07g46490.1	protein|phosphatidylinositol-4-phosphate 5-kinase, putative, expressed	IMGA|contig_81106_1.1	Phosphatidylinositol-4-phosphate 5-kinase contig_81106 300-836 H PREDN 20111014	GO:0006499|N-terminal protein myristoylation GO:0009827|plant-type cell wall modification GO:0009860|pollen tube growth GO:0046488|phosphatidylinositol metabolic process GO:0048610|cellular process involved in reproduction GO:0048868|pollen tube development GO:0072583|clathrin-mediated endocytosis	GO:0005524|ATP binding GO:0016307|phosphatidylinositol phosphate kinase activity GO:0016308|1-phosphatidylinositol-4-phosphate 5-kinase activity	GO:0005634|nucleus GO:0016324|apical plasma membrane GO:0090406|pollen tube
pt2_00658	A	A2S	Potri.001G028000	Potri.001G028000(AS) Potri.003G195700(DS)	POPTR_0001s06530	sp|Q9LK88|NQR_ARATH	NADPH:quinone oxidoreductase OS=Arabidopsis thaliana GN=NQR PE=1 SV=1	AT3G27890.1	| Symbols: NQR | NADPH:quinone oxidoreductase | chr3:10350807-10351938 REVERSE LENGTH=196	LOC_Os01g72430.1	protein|NADPH quinone oxidoreductase, putative, expressed	NA	NA	GO:0000165|MAPK cascade GO:0002831|regulation of response to biotic stimulus GO:0006096|glycolysis GO:0006612|protein targeting to membrane GO:0006833|water transport GO:0006970|response to osmotic stress GO:0006972|hyperosmotic response GO:0007030|Golgi organization GO:0009266|response to temperature stimulus GO:0009595|detection of biotic stimulus GO:0009651|response to salt stress GO:0009697|salicylic acid biosynthetic process GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010167|response to nitrate GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0015706|nitrate transport GO:0016045|detection of bacterium GO:0031347|regulation of defense response GO:0031348|negative regulation of defense response GO:0042742|defense response to bacterium GO:0043900|regulation of multi-organism process GO:0046686|response to cadmium ion GO:0050776|regulation of immune response GO:0050832|defense response to fungus	GO:0008752|FMN reductase activity	GO:0005829|cytosol GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_00659	A	A1A	Potri.001G028100	Potri.001G028100(AA)	POPTR_0001s06540	NA	NA	AT5G13500.3	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25265.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr5:4338676-4340827 FORWARD LENGTH=358	LOC_Os05g32060.1	protein|expressed protein	IMGA|Medtr5g089520.1	hypothetical protein chr5 37879484-37872834 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0016757|transferase activity, transferring glycosyl groups	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_00660	A	A1S	Potri.001G028100	Potri.001G028100(AS)	POPTR_0001s06550	NA	NA	AT5G13500.3	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25265.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr5:4338676-4340827 FORWARD LENGTH=358	LOC_Os05g32060.1	protein|expressed protein	IMGA|Medtr5g089520.1	hypothetical protein chr5 37879484-37872834 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0016757|transferase activity, transferring glycosyl groups	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_00661	A	A2S	Potri.001G028200	Potri.001G028200(AS) Potri.003G195500(DS)	POPTR_0001s06560	sp|Q9LS40|ASPG1_ARATH	Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1	AT3G54400.1	| Symbols: | Eukaryotic aspartyl protease family protein | chr3:20140291-20142599 REVERSE LENGTH=425	LOC_Os07g46480.1	protein|eukaryotic aspartyl protease domain containing protein, expressed	IMGA|contig_51649_1.1	Aspartic proteinase nepenthesin-1 contig_51649 769-2767 E PREDN 20111014	GO:0006508|proteolysis GO:0019344|cysteine biosynthetic process	GO:0004190|aspartic-type endopeptidase activity	GO:0005576|extracellular region GO:0005618|cell wall GO:0009505|plant-type cell wall GO:0009507|chloroplast GO:0048046|apoplast
pt2_00662	A	A1S	Potri.001G028200	Potri.001G028200(AS)	POPTR_0001s06560	sp|Q9LS40|ASPG1_ARATH	Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1	AT3G54400.1	| Symbols: | Eukaryotic aspartyl protease family protein | chr3:20140291-20142599 REVERSE LENGTH=425	LOC_Os07g46480.1	protein|eukaryotic aspartyl protease domain containing protein, expressed	IMGA|contig_51649_1.1	Aspartic proteinase nepenthesin-1 contig_51649 769-2767 E PREDN 20111014	GO:0006508|proteolysis GO:0019344|cysteine biosynthetic process	GO:0004190|aspartic-type endopeptidase activity	GO:0005576|extracellular region GO:0005618|cell wall GO:0009505|plant-type cell wall GO:0009507|chloroplast GO:0048046|apoplast
pt2_00663	A	A1S	Potri.001G028300	Potri.001G028300(AS)	POPTR_0001s06570	sp|O22193|PUB4_ARATH	U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4 PE=1 SV=3	AT1G08315.1	| Symbols: | ARM repeat superfamily protein | chr1:2620500-2621477 REVERSE LENGTH=325	LOC_Os01g72600.1	protein|spotted leaf 11, putative, expressed	IMGA|Medtr5g083030.1	U-box domain-containing protein chr5 34808238-34811295 E EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_00664	A	A1S	Potri.001G028400	Potri.001G028400(AS)	POPTR_0001s06580	NA	NA	AT3G54390.1	| Symbols: | sequence-specific DNA binding transcription factors | chr3:20137912-20138863 REVERSE LENGTH=296	LOC_Os09g38570.1	protein|transcription factor like protein, putative, expressed	IMGA|Medtr1g061600.1	Uridylate kinase chr1 15716787-15712368 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00665	A	A1S	Potri.001G028500	Potri.001G028500(AS)	POPTR_0001s06590	sp|Q9M7X9|CITRX_ARATH	Thioredoxin-like protein CITRX, chloroplastic OS=Arabidopsis thaliana GN=At3g06730 PE=1 SV=1	AT3G06730.1	| Symbols: TRX P, TRX z | Thioredoxin z | chr3:2124276-2125845 FORWARD LENGTH=183	LOC_Os08g29110.1	protein|thioredoxin, putative, expressed	IMGA|Medtr1g114290.1	Thioredoxin-X chr1 33117040-33114885 F EGN_Mt100125 20111014	GO:0006364|rRNA processing GO:0006399|tRNA metabolic process GO:0006662|glycerol ether metabolic process GO:0009657|plastid organization GO:0009658|chloroplast organization GO:0042793|transcription from plastid promoter GO:0045036|protein targeting to chloroplast GO:0045454|cell redox homeostasis GO:0045893|positive regulation of transcription, DNA-dependent	GO:0009055|electron carrier activity GO:0015035|protein disulfide oxidoreductase activity GO:0047134|protein-disulfide reductase activity	GO:0009295|nucleoid GO:0009507|chloroplast GO:0009579|thylakoid
pt2_00666	A	A1S	Potri.001G028600	Potri.001G028600(AS)	POPTR_0001s06600	sp|Q9FSB8|CHS2_RUTGR	Chalcone synthase 2 OS=Ruta graveolens GN=CHS2 PE=2 SV=1	AT5G13930.1	| Symbols: CHS, TT4, ATCHS | Chalcone and stilbene synthase family protein | chr5:4488762-4490035 FORWARD LENGTH=395	LOC_Os11g32650.1	protein|chalcone synthase, putative, expressed	IMGA|Medtr1g098150.1	Chalcone synthase chr1 28104343-28105634 H EGN_Mt100125 20111014	GO:0006979|response to oxidative stress GO:0008152|metabolic process GO:0009058|biosynthetic process GO:0009411|response to UV GO:0009611|response to wounding GO:0009629|response to gravity GO:0009715|chalcone biosynthetic process GO:0009718|anthocyanin-containing compound biosynthetic process GO:0009733|response to auxin stimulus GO:0009744|response to sucrose stimulus GO:0009753|response to jasmonic acid stimulus GO:0009813|flavonoid biosynthetic process GO:0009926|auxin polar transport GO:0010224|response to UV-B GO:0031540|regulation of anthocyanin biosynthetic process	GO:0003824|catalytic activity GO:0005515|protein binding GO:0016210|naringenin-chalcone synthase activity GO:0016746|transferase activity, transferring acyl groups GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005783|endoplasmic reticulum GO:0009705|plant-type vacuole membrane
pt2_00667	A	A1S	Potri.001G028800	Potri.001G028800(AS)	POPTR_0001s06610	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00668	A	A2S	Potri.001G028900	Potri.001G028900(AS) Potri.003G195000(DS)	POPTR_0001s06620	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00669	A	A1S	Potri.001G029000	Potri.001G029000(AS)	POPTR_0001s06630	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00670	B	B1S	Potri.001G029000	Potri.001G029000(BS)	POPTR_0001s06630	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00671	B	B1S	Potri.001G029200	Potri.001G029200(BS)	POPTR_0001s06640	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00672	A	A1S	Potri.001G029300	Potri.001G029300(AS)	POPTR_0001s06650	sp|Q9LRR4|R13L1_ARATH	Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana GN=RPPL1 PE=2 SV=1	AT3G14470.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr3:4857940-4861104 FORWARD LENGTH=1054	LOC_Os05g41290.1	protein|disease resistance RPP13-like protein 1, putative, expressed	IMGA|Medtr5g095910.1	NB-LRR type disease resistance protein Rps1-k-2 chr5 40893619-40897389 H EGN_Mt100125 20111014	GO:0006952|defense response	GO:0043531|ADP binding	GO:0005634|nucleus
pt2_00673	A	A1S	Potri.001G029400	Potri.001G029400(AS)	POPTR_0001s06660	NA	NA	AT5G07900.1	| Symbols: | Mitochondrial transcription termination factor family protein | chr5:2520188-2521405 FORWARD LENGTH=405	LOC_Os07g24090.1	protein|mTERF domain containing protein, expressed	IMGA|Medtr5g068860.1	mTERF family protein chr5 28178153-28176173 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0016020|membrane
pt2_00674	A	A2S	Potri.001G029500	Potri.001G029500(AS) Potri.003G194900(DS)	POPTR_0001s06670	sp|Q9LHK1|NUD16_ARATH	Nudix hydrolase 16, mitochondrial OS=Arabidopsis thaliana GN=NUDT16 PE=2 SV=1	AT3G12600.1	| Symbols: atnudt16, NUDT16 | nudix hydrolase homolog 16 | chr3:4004809-4005995 FORWARD LENGTH=180	LOC_Os03g59580.1	protein|hydrolase, NUDIX family, domain containing protein, expressed	IMGA|Medtr5g078020.1	Nudix hydrolase chr5 32317324-32319991 F EGN_Mt100125 20111014	NA	GO:0016787|hydrolase activity	GO:0005739|mitochondrion
pt2_00675	A	A1S	Potri.001G029600	Potri.001G029600(AS)	POPTR_0001s06680	sp|Q9FY48|KEG_ARATH	E3 ubiquitin-protein ligase KEG OS=Arabidopsis thaliana GN=KEG PE=1 SV=2	AT5G13530.1	| Symbols: KEG | protein kinases;ubiquitin-protein ligases | chr5:4345618-4354369 FORWARD LENGTH=1625	LOC_Os05g32570.1	protein|RING E3 ligase protein, putative, expressed	IMGA|Medtr1g012610.1	G protein-coupled receptor kinase chr1 3001173-3003743 F EGN_Mt100125 20111014	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0006468|protein phosphorylation GO:0006952|defense response GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009788|negative regulation of abscisic acid mediated signaling pathway GO:0016567|protein ubiquitination GO:0048589|developmental growth	GO:0004672|protein kinase activity GO:0004713|protein tyrosine kinase activity GO:0004842|ubiquitin-protein ligase activity GO:0005515|protein binding GO:0005524|ATP binding GO:0008270|zinc ion binding GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0043621|protein self-association	GO:0005737|cytoplasm GO:0005769|early endosome GO:0005802|trans-Golgi network
pt2_00676	C	C1S	Potri.001G029700	Potri.001G029700(CS)	NA	NA	NA	NA	NA	NA	NA	NA	GO:0000165|MAPK cascade GO:0006995|cellular response to nitrogen starvation GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process GO:0009814|defense response, incompatible interaction GO:0009816|defense response to bacterium, incompatible interaction GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0010310|regulation of hydrogen peroxide metabolic process GO:0031347|regulation of defense response GO:0031348|negative regulation of defense response GO:0042742|defense response to bacterium GO:0045088|regulation of innate immune response GO:0050832|defense response to fungus GO:0071482|cellular response to light stimulus	GO:0005515|protein binding	GO:0005634|nucleus GO:0009507|chloroplast
pt2_00677	A	A1S	Potri.001G029800	Potri.001G029800(AS)	POPTR_0001s06700	sp|O24160|TGA21_TOBAC	TGACG-sequence-specific DNA-binding protein TGA-2.1 OS=Nicotiana tabacum GN=TGA21 PE=1 SV=1	AT3G12250.2	| Symbols: TGA6, BZIP45 | TGACG motif-binding factor 6 | chr3:3906351-3908583 FORWARD LENGTH=330	LOC_Os03g20310.3	protein|transcription factor HBP-1b, putative, expressed	IMGA|Medtr5g054900.1	BZIP transcription factor chr5 22066097-22069260 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009410|response to xenobiotic stimulus GO:0009617|response to bacterium GO:0009627|systemic acquired resistance GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0030968|endoplasmic reticulum unfolded protein response	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_00678	A	A1S	Potri.001G029900	Potri.001G029900(AS)	POPTR_0001s06710	sp|Q9LHI0|NDUA6_ARATH	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Arabidopsis thaliana GN=At3g12260 PE=2 SV=1	AT3G12260.1	| Symbols: | LYR family of Fe/S cluster biogenesis protein | chr3:3909252-3910337 REVERSE LENGTH=133	LOC_Os07g44650.1	protein|LYR motif containing protein, putative, expressed	NA	NA	GO:0006096|glycolysis GO:0006511|ubiquitin-dependent protein catabolic process GO:0009060|aerobic respiration GO:0009853|photorespiration GO:0046686|response to cadmium ion GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	GO:0003824|catalytic activity	GO:0005739|mitochondrion GO:0005747|mitochondrial respiratory chain complex I GO:0016020|membrane
pt2_00679	A	A2S	Potri.001G030000	Potri.001G030000(AS) Potri.003G194500(DS)	POPTR_0001s06720	sp|O43447|PPIH_HUMAN	Peptidyl-prolyl cis-trans isomerase H OS=Homo sapiens GN=PPIH PE=1 SV=1	AT2G38730.1	| Symbols: | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein | chr2:16192579-16194038 REVERSE LENGTH=199	LOC_Os03g59700.1	protein|peptidyl-prolyl cis-trans isomerase, putative, expressed	IMGA|AC225458_18.1	Peptidyl-prolyl cis-trans isomerase AC225458.11 44405-42269 E EGN_Mt100125 20111014	GO:0006457|protein folding	GO:0003755|peptidyl-prolyl cis-trans isomerase activity	GO:0005737|cytoplasm GO:0005773|vacuole GO:0005829|cytosol GO:0005886|plasma membrane
pt2_00680	C	C1A	Potri.001G030000	Potri.001G030000(CA)	sp|O43447|PPIH_HUMAN	Peptidyl-prolyl cis-trans isomerase H OS=Homo sapiens GN=PPIH PE=1 SV=1	AT2G38730.1	| Symbols: | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein | chr2:16192579-16194038 REVERSE LENGTH=199	LOC_Os03g59700.1	protein|peptidyl-prolyl cis-trans isomerase, putative, expressed	IMGA|AC225458_18.1	Peptidyl-prolyl cis-trans isomerase AC225458.11 44405-42269 E EGN_Mt100125 20111014	GO:0006457|protein folding	GO:0003755|peptidyl-prolyl cis-trans isomerase activity	GO:0005737|cytoplasm GO:0005773|vacuole GO:0005829|cytosol GO:0005886|plasma membrane
pt2_00681	A	A1S	Potri.001G030100	Potri.001G030100(AS)	POPTR_0001s06740	NA	NA	AT5G06970.1	| Symbols: | Protein of unknown function (DUF810) | chr5:2158431-2166004 REVERSE LENGTH=1101	LOC_Os03g47930.1	protein|expressed protein	IMGA|Medtr1g107110.1	hypothetical protein chr1 31598271-31592980 E EGN_Mt100125 20111014	GO:0007155|cell adhesion GO:0008150|biological_process GO:0010090|trichome morphogenesis GO:0045010|actin nucleation	GO:0003674|molecular_function	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_00682	A	A1S	Potri.001G030200	Potri.001G030200(AS)	POPTR_0001s06750	sp|Q0WVD6|ANM3_ARATH	Probable protein arginine N-methyltransferase 3 OS=Arabidopsis thaliana GN=PRMT3 PE=2 SV=1	AT3G12270.1	| Symbols: ATPRMT3, PRMT3 | protein arginine methyltransferase 3 | chr3:3910642-3913122 FORWARD LENGTH=601	LOC_Os07g44640.1	protein|ZOS7-13 - C2H2 zinc finger protein, expressed	IMGA|Medtr1g113940.1	Protein arginine N-methyltransferase chr1 32935252-32929775 H EGN_Mt100125 20111014	GO:0000741|karyogamy GO:0001510|RNA methylation GO:0006479|protein methylation GO:0006606|protein import into nucleus GO:0009220|pyrimidine ribonucleotide biosynthetic process GO:0009560|embryo sac egg cell differentiation GO:0042991|transcription factor import into nucleus	GO:0008168|methyltransferase activity GO:0008270|zinc ion binding GO:0008276|protein methyltransferase activity	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_00683	A	A1S	Potri.001G030300	Potri.001G030300(AS)	POPTR_0001s06760	NA	NA	AT5G07900.1	| Symbols: | Mitochondrial transcription termination factor family protein | chr5:2520188-2521405 FORWARD LENGTH=405	LOC_Os07g24090.1	protein|mTERF domain containing protein, expressed	IMGA|Medtr5g068860.1	mTERF family protein chr5 28178153-28176173 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0016020|membrane
pt2_00684	A	A1S	Potri.001G030400	Potri.001G030400(AS)	POPTR_0001s06770	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0006346|methylation-dependent chromatin silencing GO:0008150|biological_process GO:0009855|determination of bilateral symmetry GO:0009909|regulation of flower development GO:0010014|meristem initiation GO:0010073|meristem maintenance GO:0016246|RNA interference GO:0016570|histone modification GO:0031047|gene silencing by RNA GO:0031048|chromatin silencing by small RNA GO:0048449|floral organ formation GO:0051567|histone H3-K9 methylation	NA	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00685	A	A1S	Potri.001G030500	Potri.001G030500(AS)	POPTR_0001s06780	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0006346|methylation-dependent chromatin silencing GO:0008150|biological_process GO:0009855|determination of bilateral symmetry GO:0009909|regulation of flower development GO:0010014|meristem initiation GO:0010073|meristem maintenance GO:0016246|RNA interference GO:0016570|histone modification GO:0031047|gene silencing by RNA GO:0031048|chromatin silencing by small RNA GO:0048449|floral organ formation GO:0051567|histone H3-K9 methylation	NA	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00686	A	A1S	Potri.001G030600	Potri.001G030600(AS)	POPTR_0001s06790	sp|Q940V3|U91A1_ARATH	UDP-glycosyltransferase 91A1 OS=Arabidopsis thaliana GN=UGT91A1 PE=2 SV=1	AT2G22590.1	| Symbols: | UDP-Glycosyltransferase superfamily protein | chr2:9593012-9594424 FORWARD LENGTH=470	LOC_Os01g64540.1	protein|anthocyanidin 3-O-glucosyltransferase, putative, expressed	IMGA|Medtr5g066410.1	Anthocyanidin 3-O-glucosyltransferase chr5 27021858-27020462 H EGN_Mt100125 20111014	GO:0008152|metabolic process	GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups	GO:0005575|cellular_component
pt2_00687	A	A1S	Potri.001G030700	Potri.001G030700(AS)	POPTR_0001s06810	sp|Q9H9Y6|RPA2_HUMAN	DNA-directed RNA polymerase I subunit RPA2 OS=Homo sapiens GN=POLR1B PE=1 SV=2	AT1G29940.1	| Symbols: NRPA2 | nuclear RNA polymerase A2 | chr1:10479322-10486670 REVERSE LENGTH=1178	LOC_Os10g35290.1	protein|DNA-directed RNA polymerase I subunit RPA2, putative, expressed	IMGA|Medtr1g023500.1	DNA-directed RNA polymerase chr1 7265019-7274285 E EGN_Mt100125 20111014	GO:0006351|transcription, DNA-dependent	GO:0003677|DNA binding GO:0003899|DNA-directed RNA polymerase activity GO:0032549|ribonucleoside binding	GO:0005634|nucleus GO:0005829|cytosol GO:0009507|chloroplast
pt2_00688	C	C1A	Potri.001G030900	Potri.001G030900(CA)	sp|A8K979|ERI2_HUMAN	ERI1 exoribonuclease 2 OS=Homo sapiens GN=ERI2 PE=2 SV=2	AT3G15140.1	| Symbols: | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr3:5099712-5101717 REVERSE LENGTH=337	LOC_Os01g17279.1	protein|exonuclease, putative, expressed	NA	NA	GO:0009220|pyrimidine ribonucleotide biosynthetic process	GO:0004527|exonuclease activity	GO:0005622|intracellular GO:0005739|mitochondrion
pt2_00689	A	A2S	Potri.001G030900	Potri.001G030900(AS) Potri.003G194300(BS)	POPTR_0001s06840	sp|A8K979|ERI2_HUMAN	ERI1 exoribonuclease 2 OS=Homo sapiens GN=ERI2 PE=2 SV=2	AT3G15140.1	| Symbols: | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr3:5099712-5101717 REVERSE LENGTH=337	LOC_Os01g17279.1	protein|exonuclease, putative, expressed	NA	NA	GO:0009220|pyrimidine ribonucleotide biosynthetic process	GO:0004527|exonuclease activity	GO:0005622|intracellular GO:0005739|mitochondrion
pt2_00690	A	A1S	Potri.001G030900	Potri.001G030900(AS)	POPTR_0001s06840	sp|A8K979|ERI2_HUMAN	ERI1 exoribonuclease 2 OS=Homo sapiens GN=ERI2 PE=2 SV=2	AT3G15140.1	| Symbols: | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr3:5099712-5101717 REVERSE LENGTH=337	LOC_Os01g17279.1	protein|exonuclease, putative, expressed	NA	NA	GO:0009220|pyrimidine ribonucleotide biosynthetic process	GO:0004527|exonuclease activity	GO:0005622|intracellular GO:0005739|mitochondrion
pt2_00691	A	A1S	Potri.001G031100	Potri.001G031100(AS)	POPTR_0001s06850	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00692	A	A1S	Potri.001G031400	Potri.001G031400(AS)	POPTR_0001s06870	sp|B9GLX8|RBR_POPTR	Retinoblastoma-related protein OS=Populus trichocarpa GN=RBL901 PE=2 SV=1	AT3G12280.2	| Symbols: RBR1 | retinoblastoma-related 1 | chr3:3913671-3918433 REVERSE LENGTH=1012	LOC_Os08g42600.2	protein|retinoblastoma-related protein-like, putative, expressed	NA	NA	GO:0001558|regulation of cell growth GO:0001708|cell fate specification GO:0006261|DNA-dependent DNA replication GO:0006349|regulation of gene expression by genetic imprinting GO:0009553|embryo sac development GO:0009555|pollen development GO:0009567|double fertilization forming a zygote and endosperm GO:0009960|endosperm development GO:0010090|trichome morphogenesis GO:0022619|generative cell differentiation GO:0032875|regulation of DNA endoreduplication GO:0042023|DNA endoreduplication GO:0048366|leaf development GO:0051302|regulation of cell division GO:0051726|regulation of cell cycle GO:0051783|regulation of nuclear division GO:2000036|regulation of stem cell maintenance	GO:0003677|DNA binding GO:0005515|protein binding GO:0008134|transcription factor binding	GO:0005634|nucleus GO:0005829|cytosol
pt2_00693	A	A1S	Potri.001G031500	Potri.001G031500(AS)	POPTR_0001s06880	sp|Q500W7|PIGM_ARATH	GPI mannosyltransferase 1 OS=Arabidopsis thaliana GN=PIGM PE=2 SV=1	AT5G22130.1	| Symbols: PNT1 | mannosyltransferase family protein | chr5:7337486-7339831 REVERSE LENGTH=450	LOC_Os03g46750.1	protein|GPI mannosyltransferase 1, putative, expressed	NA	NA	GO:0006506|GPI anchor biosynthetic process GO:0009790|embryo development GO:0030244|cellulose biosynthetic process	GO:0000030|mannosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups GO:0051751|alpha-1,4-mannosyltransferase activity	GO:0005739|mitochondrion GO:0005789|endoplasmic reticulum membrane GO:0016021|integral to membrane
pt2_00694	A	A1S	Potri.001G031500	Potri.001G031500(AS)	POPTR_0001s06880	sp|Q500W7|PIGM_ARATH	GPI mannosyltransferase 1 OS=Arabidopsis thaliana GN=PIGM PE=2 SV=1	AT5G22130.1	| Symbols: PNT1 | mannosyltransferase family protein | chr5:7337486-7339831 REVERSE LENGTH=450	LOC_Os03g46750.1	protein|GPI mannosyltransferase 1, putative, expressed	NA	NA	GO:0006506|GPI anchor biosynthetic process GO:0009790|embryo development GO:0030244|cellulose biosynthetic process	GO:0000030|mannosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups GO:0051751|alpha-1,4-mannosyltransferase activity	GO:0005739|mitochondrion GO:0005789|endoplasmic reticulum membrane GO:0016021|integral to membrane
pt2_00695	A	A1S	Potri.001G031500	Potri.001G031500(AS)	POPTR_0001s06880	sp|Q500W7|PIGM_ARATH	GPI mannosyltransferase 1 OS=Arabidopsis thaliana GN=PIGM PE=2 SV=1	AT5G22130.1	| Symbols: PNT1 | mannosyltransferase family protein | chr5:7337486-7339831 REVERSE LENGTH=450	LOC_Os03g46750.1	protein|GPI mannosyltransferase 1, putative, expressed	NA	NA	GO:0006506|GPI anchor biosynthetic process GO:0009790|embryo development GO:0030244|cellulose biosynthetic process	GO:0000030|mannosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups GO:0051751|alpha-1,4-mannosyltransferase activity	GO:0005739|mitochondrion GO:0005789|endoplasmic reticulum membrane GO:0016021|integral to membrane
pt2_00696	A	A1S	Potri.001G031600	Potri.001G031600(AS)	POPTR_0001s06890	sp|Q94BT2|AIR12_ARATH	Auxin-induced in root cultures protein 12 OS=Arabidopsis thaliana GN=AIR12 PE=1 SV=3	AT5G47530.1	| Symbols: | Auxin-responsive family protein | chr5:19281471-19282870 FORWARD LENGTH=395	LOC_Os03g09900.1	protein|membrane protein, putative, expressed	IMGA|Medtr5g097620.1	Auxin-induced in root cultures protein chr5 41730891-41729403 F EGN_Mt100125 20111014	GO:0007275|multicellular organismal development GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process	NA	GO:0005886|plasma membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_00697	A	A1S	Potri.001G031700	Potri.001G031700(AS)	POPTR_0001s06900	sp|Q96FV9|THOC1_HUMAN	THO complex subunit 1 OS=Homo sapiens GN=THOC1 PE=1 SV=1	AT5G09860.1	| Symbols: AtTHO1, THO1, AtHPR1, HPR1 | nuclear matrix protein-related | chr5:3066815-3070733 FORWARD LENGTH=599	LOC_Os03g01970.1	protein|THO complex subunit 1, putative, expressed	NA	NA	GO:0006406|mRNA export from nucleus GO:0010267|production of ta-siRNAs involved in RNA interference GO:0031047|gene silencing by RNA GO:0050832|defense response to fungus	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00698	A	A1S	Potri.001G031800	Potri.001G031800(AS)	POPTR_0001s06910	NA	NA	AT3G12320.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06980.4); Has 102 Blast hits to 102 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). | chr3:3924034-3925262 FORWARD LENGTH=269	NA	NA	NA	NA	GO:0009651|response to salt stress GO:0009737|response to abscisic acid stimulus GO:0010264|myo-inositol hexakisphosphate biosynthetic process GO:0080167|response to karrikin	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00699	G	G1	NA	NA	POPTR_0001s06920	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00700	A	A1S	Potri.001G032000	Potri.001G032000(AS)	POPTR_0001s06930	sp|A7MCT6|EKI2_MOUSE	Ethanolamine kinase 2 OS=Mus musculus GN=Etnk2 PE=1 SV=1	AT1G74320.1	| Symbols: | Protein kinase superfamily protein | chr1:27941192-27942903 FORWARD LENGTH=350	LOC_Os05g45880.1	protein|phosphotransferase, putative, expressed	IMGA|Medtr1g098090.1	Choline/ethanolamine kinase chr1 28077996-28074520 F EGN_Mt100125 20111014	NA	GO:0004103|choline kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0016773|phosphotransferase activity, alcohol group as acceptor	GO:0005737|cytoplasm
pt2_00701	A	A1S	Potri.001G032100	Potri.001G032100(AS)	POPTR_0001s06940	sp|Q6J163|5NG4_PINTA	Auxin-induced protein 5NG4 OS=Pinus taeda PE=2 SV=1	AT3G28050.1	| Symbols: | nodulin MtN21 /EamA-like transporter family protein | chr3:10442984-10445216 FORWARD LENGTH=367	LOC_Os08g44750.1	protein|auxin-induced protein 5NG4, putative, expressed	IMGA|Medtr5g034990.1	Auxin-induced protein 5NG4 chr5 14785696-14797083 F EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0016020|membrane
pt2_00702	A	A1S	Potri.001G032200	Potri.001G032200(AS)	POPTR_0001s06950	NA	NA	AT5G07020.1	| Symbols: | proline-rich family protein | chr5:2180669-2182284 REVERSE LENGTH=235	LOC_Os02g35090.1	protein|expressed protein	NA	NA	GO:0008150|biological_process GO:0009902|chloroplast relocation GO:0009965|leaf morphogenesis GO:0010027|thylakoid membrane organization GO:0016117|carotenoid biosynthetic process GO:0030154|cell differentiation GO:0034660|ncRNA metabolic process GO:0042793|transcription from plastid promoter	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009579|thylakoid
pt2_00703	A	A2S	Potri.001G032300	Potri.001G032300(AS) Potri.003G192700(DS)	POPTR_0001s06960	sp|Q9FL42|ATL69_ARATH	Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana GN=ATL69 PE=3 SV=1	AT5G07040.1	| Symbols: | RING/U-box superfamily protein | chr5:2190344-2190823 FORWARD LENGTH=159	LOC_Os12g04130.1	protein|OsFBO23 - F-box and other domain containing protein, expressed	IMGA|Medtr5g009190.1	RING-H2 zinc finger protein chr5 1905375-1903724 E EGN_Mt100125 20111014	NA	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_00704	A	A1S	Potri.001G032400	Potri.001G032400(AS)	POPTR_0001s06970	sp|Q9SX25|CXE6_ARATH	Probable carboxylesterase 6 OS=Arabidopsis thaliana GN=CXE6 PE=2 SV=1	AT1G68620.1	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr1:25766018-25767028 FORWARD LENGTH=336	LOC_Os05g33940.1	protein|alpha/beta hydrolase fold, putative, expressed	IMGA|Medtr5g005920.1	Neutral cholesterol ester hydrolase chr5 435639-436637 H EGN_Mt100125 20111014	GO:0008152|metabolic process	GO:0016787|hydrolase activity	GO:0005575|cellular_component
pt2_00705	A	A1S	Potri.001G032500	Potri.001G032500(AS)	POPTR_0001s06980	sp|Q6J163|5NG4_PINTA	Auxin-induced protein 5NG4 OS=Pinus taeda PE=2 SV=1	AT5G07050.1	| Symbols: | nodulin MtN21 /EamA-like transporter family protein | chr5:2191533-2193416 REVERSE LENGTH=402	LOC_Os05g33900.1	protein|auxin-induced protein 5NG4, putative, expressed	IMGA|Medtr5g021160.1	Auxin-induced protein 5NG4 chr5 7866846-7869645 E EGN_Mt100125 20111014	NA	NA	GO:0009507|chloroplast GO:0016020|membrane
pt2_00706	C	C1S	Potri.001G032600	Potri.001G032600(CS)	sp|Q9ZVJ3|MA655_ARATH	65-kDa microtubule-associated protein 5 OS=Arabidopsis thaliana GN=MAP65-5 PE=1 SV=2	AT2G38720.1	| Symbols: MAP65-5 | microtubule-associated protein 65-5 | chr2:16188047-16192102 FORWARD LENGTH=587	LOC_Os05g33890.1	protein|microtubule associated protein, putative, expressed	IMGA|Medtr5g093860.1	Microtubule-associated protein MAP65-1a chr5 39942422-39947104 E EGN_Mt100125 20111014	GO:0000226|microtubule cytoskeleton organization GO:0000280|nuclear division GO:0006275|regulation of DNA replication GO:0007000|nucleolus organization GO:0007067|mitosis GO:0007129|synapsis GO:0007131|reciprocal meiotic recombination GO:0008283|cell proliferation GO:0009909|regulation of flower development GO:0010389|regulation of G2/M transition of mitotic cell cycle GO:0010564|regulation of cell cycle process GO:0016458|gene silencing GO:0016572|histone phosphorylation GO:0034968|histone lysine methylation GO:0042023|DNA endoreduplication GO:0045010|actin nucleation GO:0048528|post-embryonic root development GO:0051225|spindle assembly GO:0051258|protein polymerization GO:0051302|regulation of cell division	GO:0003674|molecular_function	GO:0009524|phragmoplast GO:0009574|preprophase band GO:0055028|cortical microtubule
pt2_00707	A	A1S	Potri.001G032700	Potri.001G032700(AS)	POPTR_0001s07000	NA	NA	NA	NA	NA	NA	NA	NA	GO:0000272|polysaccharide catabolic process GO:0001578|microtubule bundle formation GO:0005982|starch metabolic process GO:0007020|microtubule nucleation GO:0008283|cell proliferation GO:0009664|plant-type cell wall organization GO:0019344|cysteine biosynthetic process GO:0030244|cellulose biosynthetic process GO:0031116|positive regulation of microtubule polymerization GO:0043622|cortical microtubule organization GO:0046785|microtubule polymerization GO:0048193|Golgi vesicle transport GO:0048528|post-embryonic root development GO:0051302|regulation of cell division	GO:0005515|protein binding GO:0008017|microtubule binding GO:0046983|protein dimerization activity	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005819|spindle GO:0005829|cytosol GO:0005874|microtubule GO:0009524|phragmoplast GO:0009574|preprophase band GO:0010005|cortical microtubule, transverse to long axis GO:0055028|cortical microtubule
pt2_00708	B	B1S	Potri.001G032800	Potri.001G032800(BS)	POPTR_0001s07010	sp|Q9T0K2|C71AK_ARATH	Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2	AT1G75130.1	| Symbols: CYP721A1 | cytochrome P450, family 721, subfamily A, polypeptide 1 | chr1:28200073-28201911 REVERSE LENGTH=505	LOC_Os07g45000.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g045250.1	Cytochrome P450 78A11 chr5 19442194-19440472 E EGN_Mt100125 20111014	GO:0009416|response to light stimulus GO:0009733|response to auxin stimulus GO:0009741|response to brassinosteroid stimulus GO:0010268|brassinosteroid homeostasis GO:0016131|brassinosteroid metabolic process GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0008395|steroid hydroxylase activity GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	NA
pt2_00709	B	B1S	Potri.001G032900	Potri.001G032900(BS)	POPTR_0001s07020	sp|Q0JNR2|CYT12_ORYSJ	Cysteine proteinase inhibitor 12 OS=Oryza sativa subsp. japonica GN=Os01g0270100 PE=2 SV=1	AT3G12490.1	| Symbols: ATCYSB, ATCYS6, CYSB | cystatin B | chr3:3960523-3961777 REVERSE LENGTH=201	LOC_Os01g16430.1	protein|cysteine proteinase inhibitor precursor protein, putative, expressed	IMGA|Medtr5g088770.1	Cysteine proteinase inhibitor chr5 37515043-37513809 F EGN_Mt100125 20111014	GO:0009628|response to abiotic stimulus	GO:0004869|cysteine-type endopeptidase inhibitor activity GO:0050897|cobalt ion binding	GO:0005576|extracellular region GO:0005783|endoplasmic reticulum GO:0005829|cytosol
pt2_00710	G	G1	NA	NA	POPTR_0001s07030	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00711	A	A1S	Potri.001G033100	Potri.001G033100(AS)	POPTR_0001s07040	sp|Q9LRR4|R13L1_ARATH	Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana GN=RPPL1 PE=2 SV=1	AT3G14470.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr3:4857940-4861104 FORWARD LENGTH=1054	LOC_Os05g41290.1	protein|disease resistance RPP13-like protein 1, putative, expressed	IMGA|Medtr5g095910.1	NB-LRR type disease resistance protein Rps1-k-2 chr5 40893619-40897389 H EGN_Mt100125 20111014	GO:0006952|defense response GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process	GO:0005515|protein binding GO:0043531|ADP binding	GO:0005576|extracellular region
pt2_00712	A	A1S	Potri.001G033200	Potri.001G033200(AS)	POPTR_0001s07050	sp|A0JPP1|NC2A_RAT	Dr1-associated corepressor OS=Rattus norvegicus GN=Drap1 PE=2 SV=1	AT3G12480.1	| Symbols: NF-YC11 | nuclear factor Y, subunit C11 | chr3:3958065-3960278 FORWARD LENGTH=293	LOC_Os05g41450.1	protein|histone-like transcription factor and archaeal histone, putative, expressed	IMGA|Medtr5g088760.1	Dr1-associated corepressor chr5 37502840-37503591 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005622|intracellular GO:0005634|nucleus GO:0005829|cytosol
pt2_00713	A	A1S	Potri.001G033400	Potri.001G033400(AS)	POPTR_0001s07060	sp|F4I171|MD15A_ARATH	Mediator of RNA polymerase II transcription subunit 15a OS=Arabidopsis thaliana GN=MED15A PE=1 SV=1	AT1G15780.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI BLink). | chr1:5430446-5435921 REVERSE LENGTH=1335	LOC_Os08g45080.1	protein|expressed protein	NA	NA	GO:0001676|long-chain fatty acid metabolic process GO:0002213|defense response to insect GO:0006633|fatty acid biosynthetic process GO:0009751|response to salicylic acid stimulus	NA	GO:0005634|nucleus
pt2_00714	A	A1S	Potri.001G033500	Potri.001G033500(AS)	POPTR_0001s07070	sp|O68283|ALKD_PSEAE	2-dehydro-3-deoxy-phosphogluconate aldolase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=eda PE=3 SV=2	NA	NA	LOC_Os07g12160.1	protein|KHG/KDPG aldolase, putative, expressed	NA	NA	NA	NA	NA
pt2_00715	A	A1S	Potri.001G033600	Potri.001G033600(AS)	POPTR_0001s07080	NA	NA	AT2G26920.1	| Symbols: | Ubiquitin-associated/translation elongation factor EF1B protein | chr2:11489648-11491588 FORWARD LENGTH=646	LOC_Os05g33850.1	protein|UBA/TS-N domain containing protein, expressed	IMGA|Medtr5g088750.1	hypothetical protein chr5 37495868-37490284 E EGN_Mt100125 20111014	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00716	A	A1S	Potri.001G033700	Potri.001G033700(AS)	POPTR_0001s07090	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00717	A	A1S	Potri.001G033800	Potri.001G033800(AS)	POPTR_0001s07100	sp|Q9SWH5|FUT1_ARATH	Galactoside 2-alpha-L-fucosyltransferase OS=Arabidopsis thaliana GN=FUT1 PE=2 SV=2	AT2G03220.1	| Symbols: FT1, ATFUT1, ATFT1, MUR2 | fucosyltransferase 1 | chr2:970401-972353 REVERSE LENGTH=558	LOC_Os02g52630.1	protein|xyloglucan fucosyltransferase, putative, expressed	IMGA|Medtr1g090430.1	Alpha-1 2-fucosyltransferase chr1 24966674-24964926 H EGN_Mt100125 20111014	GO:0009744|response to sucrose stimulus GO:0009749|response to glucose stimulus GO:0009750|response to fructose stimulus GO:0009969|xyloglucan biosynthetic process GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process	GO:0008107|galactoside 2-alpha-L-fucosyltransferase activity GO:0008417|fucosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups	GO:0005794|Golgi apparatus GO:0016020|membrane
pt2_00718	A	A1S	Potri.001G033900	Potri.001G033900(AS)	POPTR_0001s07110	sp|Q9CR08|RPP29_MOUSE	Ribonuclease P protein subunit p29 OS=Mus musculus GN=Pop4 PE=2 SV=1	AT2G43190.2	| Symbols: | ribonuclease P family protein | chr2:17956220-17957833 FORWARD LENGTH=295	LOC_Os05g39530.1	protein|ribonuclease P family protein, putative, expressed	IMGA|Medtr5g007880.1	Ribonuclease P protein subunit p29 chr5 1340372-1336134 E EGN_Mt100125 20111014	GO:0006364|rRNA processing GO:0006396|RNA processing GO:0009410|response to xenobiotic stimulus GO:0048522|positive regulation of cellular process	GO:0003723|RNA binding GO:0004526|ribonuclease P activity GO:0004540|ribonuclease activity	GO:0000172|ribonuclease MRP complex GO:0005634|nucleus GO:0005655|nucleolar ribonuclease P complex GO:0030677|ribonuclease P complex
pt2_00719	B	B1S	Potri.001G034000	Potri.001G034000(BS)	POPTR_0001s07120	sp|Q9SWH5|FUT1_ARATH	Galactoside 2-alpha-L-fucosyltransferase OS=Arabidopsis thaliana GN=FUT1 PE=2 SV=2	AT2G03220.1	| Symbols: FT1, ATFUT1, ATFT1, MUR2 | fucosyltransferase 1 | chr2:970401-972353 REVERSE LENGTH=558	LOC_Os02g52640.1	protein|xyloglucan fucosyltransferase, putative, expressed	IMGA|Medtr1g090430.1	Alpha-1 2-fucosyltransferase chr1 24966674-24964926 H EGN_Mt100125 20111014	NA	GO:0008107|galactoside 2-alpha-L-fucosyltransferase activity GO:0008417|fucosyltransferase activity	GO:0005794|Golgi apparatus GO:0016020|membrane
pt2_00720	A	A2S	Potri.001G034100	Potri.001G034100(AS) Potri.003G191200(DS)	POPTR_0001s07130	sp|Q9M5Q1|FUT1_PEA	Galactoside 2-alpha-L-fucosyltransferase OS=Pisum sativum GN=FT1 PE=2 SV=1	AT2G03220.1	| Symbols: FT1, ATFUT1, ATFT1, MUR2 | fucosyltransferase 1 | chr2:970401-972353 REVERSE LENGTH=558	LOC_Os02g52630.1	protein|xyloglucan fucosyltransferase, putative, expressed	IMGA|Medtr1g090430.1	Alpha-1 2-fucosyltransferase chr1 24966674-24964926 H EGN_Mt100125 20111014	GO:0009744|response to sucrose stimulus GO:0009749|response to glucose stimulus GO:0009750|response to fructose stimulus GO:0009969|xyloglucan biosynthetic process GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process	GO:0008107|galactoside 2-alpha-L-fucosyltransferase activity GO:0008417|fucosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups	GO:0005794|Golgi apparatus GO:0016020|membrane
pt2_00721	A	A1S	Potri.001G034200	Potri.001G034200(AS)	POPTR_0001s07140	sp|Q9FFY6|ELCL_ARATH	Protein ELC-like OS=Arabidopsis thaliana GN=ELCL PE=1 SV=1	AT5G13860.1	| Symbols: ELC-Like | ELCH-like | chr5:4473212-4474318 REVERSE LENGTH=368	LOC_Os02g58640.1	protein|tumor susceptibility gene 101, putative, expressed	IMGA|Medtr5g075880.1	Protein ELC chr5 31283129-31282572 H EGN_Mt100125 20111014	GO:0006464|cellular protein modification process GO:0010091|trichome branching GO:0010200|response to chitin GO:0015031|protein transport	GO:0005515|protein binding GO:0016881|acid-amino acid ligase activity GO:0043130|ubiquitin binding	GO:0000813|ESCRT I complex GO:0005634|nucleus GO:0005769|early endosome GO:0005770|late endosome GO:0043234|protein complex
pt2_00722	A	A1S	Potri.001G034300	Potri.001G034300(AS)	POPTR_0001s07150	sp|Q8UVK2|SPT6H_DANRE	Transcription elongation factor SPT6 OS=Danio rerio GN=supt6h PE=1 SV=1	AT1G65440.3	| Symbols: GTB1 | global transcription factor group B1 | chr1:24306988-24314302 REVERSE LENGTH=1454	NA	NA	NA	NA	GO:0006139|nucleobase-containing compound metabolic process GO:0006333|chromatin assembly or disassembly GO:0006352|DNA-dependent transcription, initiation GO:0006357|regulation of transcription from RNA polymerase II promoter GO:0009630|gravitropism GO:0032784|regulation of DNA-dependent transcription, elongation	GO:0003723|RNA binding GO:0016788|hydrolase activity, acting on ester bonds	GO:0005634|nucleus GO:0005829|cytosol GO:0009506|plasmodesma
pt2_00723	A	A2S	Potri.001G034400	Potri.001G034400(AS) Potri.003G190800(DS)	POPTR_0001s07160	sp|Q9M612|NACA_PINTA	Nascent polypeptide-associated complex subunit alpha-like protein OS=Pinus taeda PE=2 SV=1	AT3G12390.1	| Symbols: | Nascent polypeptide-associated complex (NAC), alpha subunit family protein | chr3:3942344-3943595 FORWARD LENGTH=203	LOC_Os01g71230.2	protein|nascent polypeptide-associated complex subunit alpha-like protein 3, putative, expressed	NA	NA	GO:0006606|protein import into nucleus GO:0009651|response to salt stress	NA	GO:0005634|nucleus GO:0005829|cytosol GO:0009506|plasmodesma GO:0022626|cytosolic ribosome
pt2_00724	A	A1S	Potri.001G034500	Potri.001G034500(AS)	POPTR_0001s07170	NA	NA	AT5G07900.1	| Symbols: | Mitochondrial transcription termination factor family protein | chr5:2520188-2521405 FORWARD LENGTH=405	LOC_Os07g24090.1	protein|mTERF domain containing protein, expressed	IMGA|Medtr5g068860.1	mTERF family protein chr5 28178153-28176173 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0016020|membrane
pt2_00725	A	A1S	Potri.001G034600	Potri.001G034600(AS)	POPTR_0001s07180	NA	NA	AT5G07900.1	| Symbols: | Mitochondrial transcription termination factor family protein | chr5:2520188-2521405 FORWARD LENGTH=405	LOC_Os07g24090.1	protein|mTERF domain containing protein, expressed	IMGA|Medtr5g068860.1	mTERF family protein chr5 28178153-28176173 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0016020|membrane
pt2_00726	A	A2S	Potri.001G034800	Potri.001G034800(AS) Potri.001G034700(AA)	POPTR_0001s07190	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00727	A	A1S	Potri.001G034700	Potri.001G034700(AS)	POPTR_0001s07200	NA	NA	AT5G07900.1	| Symbols: | Mitochondrial transcription termination factor family protein | chr5:2520188-2521405 FORWARD LENGTH=405	LOC_Os07g24090.1	protein|mTERF domain containing protein, expressed	IMGA|Medtr5g068860.1	mTERF family protein chr5 28178153-28176173 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0016020|membrane
pt2_00728	A	A1S	Potri.001G034900	Potri.001G034900(AS)	POPTR_0001s07210	NA	NA	AT5G07900.1	| Symbols: | Mitochondrial transcription termination factor family protein | chr5:2520188-2521405 FORWARD LENGTH=405	LOC_Os07g24090.1	protein|mTERF domain containing protein, expressed	IMGA|Medtr5g068860.1	mTERF family protein chr5 28178153-28176173 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0016020|membrane
pt2_00729	R	R	NA	NA	POPTR_0001s07220	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00730	R	R	NA	NA	POPTR_0001s07230	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00731	A	A1S	Potri.001G035000	Potri.001G035000(AS)	POPTR_0001s07240	NA	NA	AT5G07900.1	| Symbols: | Mitochondrial transcription termination factor family protein | chr5:2520188-2521405 FORWARD LENGTH=405	LOC_Os02g51450.1	protein|mTERF family protein, expressed	IMGA|Medtr5g094610.1	mTERF domain-containing protein chr5 40306157-40309320 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0016020|membrane
pt2_00732	A	A1S	Potri.001G035200	Potri.001G035200(AS)	POPTR_0001s07250	NA	NA	AT5G07900.1	| Symbols: | Mitochondrial transcription termination factor family protein | chr5:2520188-2521405 FORWARD LENGTH=405	LOC_Os07g24090.1	protein|mTERF domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0016020|membrane
pt2_00733	D	D1S	Potri.001G035300	Potri.001G035300(DS)	POPTR_0001s07260	NA	NA	AT5G07900.1	| Symbols: | Mitochondrial transcription termination factor family protein | chr5:2520188-2521405 FORWARD LENGTH=405	LOC_Os07g24090.1	protein|mTERF domain containing protein, expressed	IMGA|Medtr5g068860.1	mTERF family protein chr5 28178153-28176173 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0016020|membrane
pt2_00734	A	A1S	Potri.001G035400	Potri.001G035400(AS)	POPTR_0001s07270	sp|Q6Z8C8|CDKF4_ORYSJ	Cyclin-dependent kinase F-4 OS=Oryza sativa subsp. japonica GN=CDKF-4 PE=2 SV=1	AT4G19110.3	| Symbols: | Protein kinase superfamily protein | chr4:10454770-10457032 REVERSE LENGTH=404	LOC_Os06g02550.2	protein|CPuORF21 - conserved peptide uORF-containing transcript, expressed	IMGA|Medtr5g026960.1	Serine/threonine protein kinase ICK chr5 10917762-10923315 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0045727|positive regulation of translation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_00735	B	B1S	Potri.001G035500	Potri.001G035500(BS)	POPTR_0001s07280	sp|Q9SU30|CPR30_ARATH	F-box protein CPR30 OS=Arabidopsis thaliana GN=CPR30 PE=1 SV=2	AT4G12560.2	| Symbols: CPR30 | F-box and associated interaction domains-containing protein | chr4:7441815-7443157 FORWARD LENGTH=413	LOC_Os09g20650.1	protein|OsFBX323 - F-box domain containing protein, expressed	IMGA|Medtr5g011200.1	F-box/kelch-repeat protein chr5 2937583-2939621 E EGN_Mt100125 20111014	GO:0031348|negative regulation of defense response GO:0042177|negative regulation of protein catabolic process	GO:0003674|molecular_function GO:0005515|protein binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_00736	A	A1S	Potri.001G035500	Potri.001G035500(AS)	POPTR_0001s07280	sp|Q9SU30|CPR30_ARATH	F-box protein CPR30 OS=Arabidopsis thaliana GN=CPR30 PE=1 SV=2	AT4G12560.2	| Symbols: CPR30 | F-box and associated interaction domains-containing protein | chr4:7441815-7443157 FORWARD LENGTH=413	LOC_Os09g20650.1	protein|OsFBX323 - F-box domain containing protein, expressed	IMGA|Medtr5g011200.1	F-box/kelch-repeat protein chr5 2937583-2939621 E EGN_Mt100125 20111014	GO:0031348|negative regulation of defense response GO:0042177|negative regulation of protein catabolic process	GO:0003674|molecular_function GO:0005515|protein binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_00737	A	A1S	Potri.001G035500	Potri.001G035500(AS)	POPTR_0001s07280	sp|Q9SU30|CPR30_ARATH	F-box protein CPR30 OS=Arabidopsis thaliana GN=CPR30 PE=1 SV=2	AT4G12560.2	| Symbols: CPR30 | F-box and associated interaction domains-containing protein | chr4:7441815-7443157 FORWARD LENGTH=413	LOC_Os09g20650.1	protein|OsFBX323 - F-box domain containing protein, expressed	IMGA|Medtr5g011200.1	F-box/kelch-repeat protein chr5 2937583-2939621 E EGN_Mt100125 20111014	GO:0031348|negative regulation of defense response GO:0042177|negative regulation of protein catabolic process	GO:0003674|molecular_function GO:0005515|protein binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_00738	A	A1S	Potri.001G035600	Potri.001G035600(AS)	POPTR_0001s07290	NA	NA	AT5G07900.1	| Symbols: | Mitochondrial transcription termination factor family protein | chr5:2520188-2521405 FORWARD LENGTH=405	LOC_Os07g24090.1	protein|mTERF domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0016020|membrane
pt2_00739	A	A1S	Potri.001G035700	Potri.001G035700(AS)	POPTR_0001s07300	sp|O60318|MCM3A_HUMAN	80 kDa MCM3-associated protein OS=Homo sapiens GN=MCM3AP PE=1 SV=2	AT3G54380.1	| Symbols: | SAC3/GANP/Nin1/mts3/eIF-3 p25 family | chr3:20133985-20136752 REVERSE LENGTH=406	LOC_Os03g22870.1	protein|SAC3/GANP family protein, putative, expressed	NA	NA	GO:0008150|biological_process GO:0048573|photoperiodism, flowering	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005739|mitochondrion
pt2_00740	A	A1S	Potri.001G035800	Potri.001G035800(AS)	POPTR_0001s07310	sp|Q7TQ20|DNJC2_RAT	DnaJ homolog subfamily C member 2 OS=Rattus norvegicus GN=Dnajc2 PE=2 SV=1	AT3G11450.1	| Symbols: | DnaJ domain ;Myb-like DNA-binding domain | chr3:3605459-3607402 REVERSE LENGTH=647	LOC_Os04g30890.1	protein|MYB family transcription factor, putative, expressed	NA	NA	GO:0006457|protein folding	GO:0003677|DNA binding GO:0031072|heat shock protein binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00741	A	A1S	Potri.001G035900	Potri.001G035900(AS)	POPTR_0001s07320	sp|Q9FFW5|PERK8_ARATH	Proline-rich receptor-like protein kinase PERK8 OS=Arabidopsis thaliana GN=PERK8 PE=1 SV=1	AT5G56790.1	| Symbols: | Protein kinase superfamily protein | chr5:22968610-22971391 FORWARD LENGTH=669	LOC_Os01g41870.2	protein|protein kinase, putative, expressed	IMGA|Medtr5g034210.1	Receptor-like-kinase chr5 14377604-14370310 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0046777|protein autophosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005575|cellular_component GO:0005886|plasma membrane
pt2_00742	A	A1S	Potri.001G036000	Potri.001G036000(AS)	POPTR_0001s07330	sp|Q0JIC2|GAM1_ORYSJ	Transcription factor GAMYB OS=Oryza sativa subsp. japonica GN=GAM1 PE=2 SV=1	AT5G06100.3	| Symbols: MYB33, ATMYB33 | myb domain protein 33 | chr5:1838555-1840386 FORWARD LENGTH=520	LOC_Os01g59660.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr1g021230.1	MYB family transcription factor-like protein chr1 6441630-6444638 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009686|gibberellin biosynthetic process GO:0009723|response to ethylene stimulus GO:0009740|gibberellic acid mediated signaling pathway GO:0009751|response to salicylic acid stimulus GO:0009789|positive regulation of abscisic acid mediated signaling pathway GO:0043068|positive regulation of programmed cell death GO:0045893|positive regulation of transcription, DNA-dependent GO:0045926|negative regulation of growth GO:0048235|pollen sperm cell differentiation	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00743	A	A1S	Potri.001G036000	Potri.001G036000(AS)	POPTR_0001s07330	sp|Q0JIC2|GAM1_ORYSJ	Transcription factor GAMYB OS=Oryza sativa subsp. japonica GN=GAM1 PE=2 SV=1	AT5G06100.3	| Symbols: MYB33, ATMYB33 | myb domain protein 33 | chr5:1838555-1840386 FORWARD LENGTH=520	LOC_Os01g59660.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr1g021230.1	MYB family transcription factor-like protein chr1 6441630-6444638 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009686|gibberellin biosynthetic process GO:0009723|response to ethylene stimulus GO:0009740|gibberellic acid mediated signaling pathway GO:0009751|response to salicylic acid stimulus GO:0009789|positive regulation of abscisic acid mediated signaling pathway GO:0043068|positive regulation of programmed cell death GO:0045893|positive regulation of transcription, DNA-dependent GO:0045926|negative regulation of growth GO:0048235|pollen sperm cell differentiation	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00744	A	A1S	Potri.001G036000	Potri.001G036000(AS)	POPTR_0001s07330	sp|Q0JIC2|GAM1_ORYSJ	Transcription factor GAMYB OS=Oryza sativa subsp. japonica GN=GAM1 PE=2 SV=1	AT5G06100.3	| Symbols: MYB33, ATMYB33 | myb domain protein 33 | chr5:1838555-1840386 FORWARD LENGTH=520	LOC_Os01g59660.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr1g021230.1	MYB family transcription factor-like protein chr1 6441630-6444638 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009686|gibberellin biosynthetic process GO:0009723|response to ethylene stimulus GO:0009740|gibberellic acid mediated signaling pathway GO:0009751|response to salicylic acid stimulus GO:0009789|positive regulation of abscisic acid mediated signaling pathway GO:0043068|positive regulation of programmed cell death GO:0045893|positive regulation of transcription, DNA-dependent GO:0045926|negative regulation of growth GO:0048235|pollen sperm cell differentiation	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00745	A	A2S	Potri.001G036100	Potri.001G036100(AS) Potri.003G189500(DS)	POPTR_0001s07340	sp|Q5ZLT0|XPO7_CHICK	Exportin-7 OS=Gallus gallus GN=XPO7 PE=2 SV=1	AT5G06120.2	| Symbols: | ARM repeat superfamily protein | chr5:1845309-1852601 FORWARD LENGTH=1052	LOC_Os03g42050.1	protein|exportin-7-A, putative, expressed	IMGA|contig_8300_1.1	RAN binding protein 16-like protein contig_8300 1546-815 H PREDN 20111014	GO:0000059|protein import into nucleus, docking GO:0006486|protein glycosylation GO:0006886|intracellular protein transport GO:0009630|gravitropism	GO:0008565|protein transporter activity	GO:0005634|nucleus GO:0005643|nuclear pore GO:0005737|cytoplasm GO:0005739|mitochondrion
pt2_00746	A	A1S	Potri.001G036400	Potri.001G036400(AS)	POPTR_0001s07350	NA	NA	AT3G54360.1	| Symbols: | zinc ion binding | chr3:20128570-20131581 REVERSE LENGTH=405	LOC_Os01g01420.3	protein|expressed protein	IMGA|contig_55279_1.1	Polycomb complex protein BMI-1-B contig_55279 979-4644 E PREDN 20111014	NA	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_00747	A	A1S	Potri.001G036500	Potri.001G036500(AS)	POPTR_0001s07360	sp|Q8L5A7|SOT15_ARATH	Cytosolic sulfotransferase 15 OS=Arabidopsis thaliana GN=SOT15 PE=1 SV=1	AT5G07010.1	| Symbols: ATST2A, ST2A | sulfotransferase 2A | chr5:2174960-2176039 REVERSE LENGTH=359	LOC_Os02g45890.1	protein|sulfotransferase domain containing protein, expressed	IMGA|contig_18076_1.1	Sulfotransferase 5b contig_18076 117-1129 H PREDN 20111014	GO:0009611|response to wounding GO:0009694|jasmonic acid metabolic process GO:0009695|jasmonic acid biosynthetic process GO:0009753|response to jasmonic acid stimulus GO:0009867|jasmonic acid mediated signaling pathway	GO:0008146|sulfotransferase activity GO:0080131|hydroxyjasmonate sulfotransferase activity	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_00748	A	A1S	Potri.001G036600	Potri.001G036600(AS)	POPTR_0001s07370	sp|Q8L5A7|SOT15_ARATH	Cytosolic sulfotransferase 15 OS=Arabidopsis thaliana GN=SOT15 PE=1 SV=1	AT5G07010.1	| Symbols: ATST2A, ST2A | sulfotransferase 2A | chr5:2174960-2176039 REVERSE LENGTH=359	LOC_Os02g45890.1	protein|sulfotransferase domain containing protein, expressed	IMGA|contig_18076_1.1	Sulfotransferase 5b contig_18076 117-1129 H PREDN 20111014	GO:0009611|response to wounding GO:0009694|jasmonic acid metabolic process GO:0009695|jasmonic acid biosynthetic process GO:0009753|response to jasmonic acid stimulus GO:0009867|jasmonic acid mediated signaling pathway	GO:0008146|sulfotransferase activity GO:0080131|hydroxyjasmonate sulfotransferase activity	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_00749	A	A1S	Potri.001G036700	Potri.001G036700(AS)	POPTR_0001s07380	sp|Q8L5A7|SOT15_ARATH	Cytosolic sulfotransferase 15 OS=Arabidopsis thaliana GN=SOT15 PE=1 SV=1	AT5G07010.1	| Symbols: ATST2A, ST2A | sulfotransferase 2A | chr5:2174960-2176039 REVERSE LENGTH=359	LOC_Os06g42120.1	protein|sulfotransferase domain containing protein, expressed	IMGA|contig_18076_1.1	Sulfotransferase 5b contig_18076 117-1129 H PREDN 20111014	GO:0009611|response to wounding GO:0009694|jasmonic acid metabolic process GO:0009695|jasmonic acid biosynthetic process GO:0009753|response to jasmonic acid stimulus GO:0009867|jasmonic acid mediated signaling pathway	GO:0008146|sulfotransferase activity GO:0080131|hydroxyjasmonate sulfotransferase activity	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_00750	A	A2S	Potri.001G036800	Potri.001G036800(AS) Potri.003G188700(DS)	POPTR_0001s07390	sp|Q9C5P4|SUVH3_ARATH	Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3 OS=Arabidopsis thaliana GN=SUVH3 PE=2 SV=2	AT1G73100.1	| Symbols: SUVH3, SDG19 | SU(VAR)3-9 homolog 3 | chr1:27491970-27493979 FORWARD LENGTH=669	LOC_Os11g38900.1	protein|histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed	IMGA|Medtr5g013420.1	"Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6" chr5 4000445-4004388 E EGN_Mt100125 20111014	GO:0034968|histone lysine methylation GO:0040029|regulation of gene expression, epigenetic	GO:0008270|zinc ion binding GO:0018024|histone-lysine N-methyltransferase activity GO:0042054|histone methyltransferase activity GO:0042393|histone binding	GO:0005634|nucleus GO:0005694|chromosome
pt2_00751	A	A1S	Potri.001G036900	Potri.001G036900(AS)	POPTR_0001s07400	sp|O24145|4CL1_TOBAC	4-coumarate--CoA ligase 1 OS=Nicotiana tabacum GN=4CL1 PE=2 SV=1	AT3G21240.1	| Symbols: 4CL2, AT4CL2 | 4-coumarate:CoA ligase 2 | chr3:7454497-7457314 REVERSE LENGTH=556	LOC_Os02g08100.1	protein|AMP-binding domain containing protein, expressed	IMGA|Medtr5g007640.1	4-coumarate CoA ligase chr5 1207155-1213155 E EGN_Mt100125 20111014	GO:0008152|metabolic process GO:0009411|response to UV GO:0009611|response to wounding GO:0009620|response to fungus GO:0009698|phenylpropanoid metabolic process GO:0009805|coumarin biosynthetic process GO:0009963|positive regulation of flavonoid biosynthetic process	GO:0003824|catalytic activity GO:0016207|4-coumarate-CoA ligase activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00752	A	A1S	Potri.001G037000	Potri.001G037000(AS)	POPTR_0001s07410	sp|Q9LDX1|SGS3_ARATH	Protein SUPPRESSOR OF GENE SILENCING 3 OS=Arabidopsis thaliana GN=SGS3 PE=1 SV=1	AT5G23570.1	| Symbols: SGS3, ATSGS3 | XS domain-containing protein / XS zinc finger domain-containing protein-related | chr5:7943621-7945874 FORWARD LENGTH=625	LOC_Os12g09580.1	protein|leafbladeless1, putative, expressed	NA	NA	GO:0009616|virus induced gene silencing GO:0010025|wax biosynthetic process GO:0010050|vegetative phase change GO:0010267|production of ta-siRNAs involved in RNA interference GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0051607|defense response to virus	NA	GO:0005737|cytoplasm GO:0005783|endoplasmic reticulum GO:0005829|cytosol
pt2_00753	A	A1S	Potri.001G037000	Potri.001G037000(AS)	POPTR_0001s07410	sp|Q9LDX1|SGS3_ARATH	Protein SUPPRESSOR OF GENE SILENCING 3 OS=Arabidopsis thaliana GN=SGS3 PE=1 SV=1	AT5G23570.1	| Symbols: SGS3, ATSGS3 | XS domain-containing protein / XS zinc finger domain-containing protein-related | chr5:7943621-7945874 FORWARD LENGTH=625	LOC_Os12g09580.1	protein|leafbladeless1, putative, expressed	NA	NA	GO:0009616|virus induced gene silencing GO:0010025|wax biosynthetic process GO:0010050|vegetative phase change GO:0010267|production of ta-siRNAs involved in RNA interference GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0051607|defense response to virus	NA	GO:0005737|cytoplasm GO:0005783|endoplasmic reticulum GO:0005829|cytosol
pt2_00754	A	A1S	Potri.001G037100	Potri.001G037100(AS)	POPTR_0001s07420	sp|A5YVF1|SGS3_SOLLC	Protein SUPPRESSOR OF GENE SILENCING 3 OS=Solanum lycopersicum GN=SGS3 PE=1 SV=1	AT5G23570.1	| Symbols: SGS3, ATSGS3 | XS domain-containing protein / XS zinc finger domain-containing protein-related | chr5:7943621-7945874 FORWARD LENGTH=625	LOC_Os12g09580.1	protein|leafbladeless1, putative, expressed	NA	NA	GO:0009616|virus induced gene silencing GO:0010025|wax biosynthetic process GO:0010050|vegetative phase change GO:0010267|production of ta-siRNAs involved in RNA interference GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0051607|defense response to virus	NA	GO:0005737|cytoplasm GO:0005783|endoplasmic reticulum GO:0005829|cytosol
pt2_00755	A	A1S	Potri.001G037200	Potri.001G037200(AS)	POPTR_0001s07430	sp|Q4KLT0|RN217_XENLA	Probable E3 ubiquitin-protein ligase RNF217 OS=Xenopus laevis GN=rnf217 PE=2 SV=1	AT3G14250.1	| Symbols: | RING/U-box superfamily protein | chr3:4745963-4746958 REVERSE LENGTH=303	LOC_Os08g35060.1	protein|protein binding protein, putative, expressed	IMGA|Medtr5g062990.1	E3 ubiquitin-protein ligase RNF19A chr5 25393017-25394131 H EGN_Mt100125 20111014	NA	GO:0008270|zinc ion binding	NA
pt2_00756	A	A1S	Potri.001G037300	Potri.001G037300(AS)	POPTR_0001s07440	sp|P93431|RCA_ORYSJ	Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2	AT1G73110.1	| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:27494344-27496844 REVERSE LENGTH=432	LOC_Os04g56320.1	protein|AAA-type ATPase family protein, putative, expressed	IMGA|Medtr5g080450.1	Ribulose-1 5-bisphosphate carboxylase/oxygenase activase chr5 33426414-33421553 F EGN_Mt100125 20111014	GO:0010027|thylakoid membrane organization GO:0016117|carotenoid biosynthetic process	GO:0005524|ATP binding GO:0016887|ATPase activity	GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane
pt2_00757	C	C1S	Potri.001G037400	Potri.001G037400(CS)	NA	NA	NA	NA	LOC_Os04g51410.1	protein|expressed protein	NA	NA	GO:0008150|biological_process GO:0015996|chlorophyll catabolic process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_00758	A	A1S	Potri.001G037500	Potri.001G037500(AS)	POPTR_0001s07460	NA	NA	AT2G24530.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G31440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr2:10422597-10423820 FORWARD LENGTH=407	LOC_Os04g56300.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00759	A	A1S	Potri.001G037600	Potri.001G037600(AS)	POPTR_0001s07470	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00760	A	A1S	Potri.001G037700	Potri.001G037700(AS)	POPTR_0001s07480	sp|Q40784|AAPC_CENCI	Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris PE=2 SV=1	AT5G57330.1	| Symbols: | Galactose mutarotase-like superfamily protein | chr5:23218392-23220664 FORWARD LENGTH=312	LOC_Os04g56290.5	protein|aldose 1-epimerase, putative, expressed	IMGA|Medtr5g009670.1	Apospory-associated protein C chr5 2153652-2151588 F EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0006012|galactose metabolic process GO:0009737|response to abscisic acid stimulus GO:0019761|glucosinolate biosynthetic process	GO:0003824|catalytic activity GO:0004034|aldose 1-epimerase activity GO:0016853|isomerase activity GO:0030246|carbohydrate binding	GO:0005829|cytosol
pt2_00761	A	A1S	Potri.001G037800	Potri.001G037800(AS)	POPTR_0001s07490	sp|Q9LTW9|FLA14_ARATH	Fasciclin-like arabinogalactan protein 14 OS=Arabidopsis thaliana GN=FLA14 PE=2 SV=1	AT3G12660.1	| Symbols: FLA14 | FASCICLIN-like arabinogalactan protein 14 precursor | chr3:4019060-4019827 FORWARD LENGTH=255	LOC_Os02g26320.1	protein|fasciclin-like arabinogalactan precursor protein, putative, expressed	IMGA|contig_248110_1.1	Fasciclin-like arabinogalactan protein contig_248110 1196-16 E PREDN 20111014	NA	GO:0003674|molecular_function	GO:0005886|plasma membrane GO:0031225|anchored to membrane
pt2_00762	A	A1S	Potri.001G037900	Potri.001G037900(AS)	POPTR_0001s07500	sp|Q551H4|FRAY2_DICDI	Serine/threonine-protein kinase fray2 OS=Dictyostelium discoideum GN=fray2 PE=3 SV=1	AT1G79640.2	| Symbols: | Protein kinase superfamily protein | chr1:29966821-29971090 REVERSE LENGTH=680	LOC_Os02g54900.1	protein|STE_PAK_Ste20_STLK.2 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	IMGA|Medtr5g045190.1	Serine/threonine protein kinase chr5 19408593-19396721 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus
pt2_00763	A	A1S	Potri.001G037900	Potri.001G037900(AS)	POPTR_0001s07500	sp|Q551H4|FRAY2_DICDI	Serine/threonine-protein kinase fray2 OS=Dictyostelium discoideum GN=fray2 PE=3 SV=1	AT1G79640.2	| Symbols: | Protein kinase superfamily protein | chr1:29966821-29971090 REVERSE LENGTH=680	LOC_Os02g54900.1	protein|STE_PAK_Ste20_STLK.2 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	IMGA|Medtr5g045190.1	Serine/threonine protein kinase chr5 19408593-19396721 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus
pt2_00764	A	A2S	Potri.001G038000	Potri.001G038000(AS) Potri.003G186600(BS)	POPTR_0001s07510	sp|Q84L33|RD23A_ARATH	Putative DNA repair protein RAD23-1 OS=Arabidopsis thaliana GN=RAD23-1 PE=2 SV=3	AT1G79650.1	| Symbols: RAD23, RAD23B | Rad23 UV excision repair protein family | chr1:29972406-29975132 REVERSE LENGTH=371	LOC_Os02g08300.2	protein|RAD23 DNA repair protein, putative, expressed	NA	NA	GO:0006259|DNA metabolic process GO:0006284|base-excision repair GO:0006289|nucleotide-excision repair GO:0007126|meiosis GO:0033044|regulation of chromosome organization GO:0043161|proteasomal ubiquitin-dependent protein catabolic process	GO:0003684|damaged DNA binding GO:0043130|ubiquitin binding GO:0070628|proteasome binding	GO:0005634|nucleus
pt2_00765	A	A1S	Potri.001G038000	Potri.001G038000(AS)	POPTR_0001s07510	sp|Q84L33|RD23A_ARATH	Putative DNA repair protein RAD23-1 OS=Arabidopsis thaliana GN=RAD23-1 PE=2 SV=3	AT1G79650.1	| Symbols: RAD23, RAD23B | Rad23 UV excision repair protein family | chr1:29972406-29975132 REVERSE LENGTH=371	LOC_Os02g08300.2	protein|RAD23 DNA repair protein, putative, expressed	NA	NA	GO:0006259|DNA metabolic process GO:0006284|base-excision repair GO:0006289|nucleotide-excision repair GO:0007126|meiosis GO:0033044|regulation of chromosome organization GO:0043161|proteasomal ubiquitin-dependent protein catabolic process	GO:0003684|damaged DNA binding GO:0043130|ubiquitin binding GO:0070628|proteasome binding	GO:0005634|nucleus
pt2_00766	A	A2S	Potri.001G038100	Potri.001G038100(AS) Potri.003G186500(BS)	POPTR_0001s07520	sp|A7S4N4|SERIC_NEMVE	Probable serine incorporator OS=Nematostella vectensis GN=serinc PE=3 SV=1	AT1G16180.2	| Symbols: | Serinc-domain containing serine and sphingolipid biosynthesis protein | chr1:5540905-5542670 FORWARD LENGTH=412	LOC_Os02g54990.2	protein|TMS membrane protein/tumour differentially expressed protein, putative, expressed	IMGA|contig_11113_1.1	Serine incorporator contig_11113 108-2186 E PREDN 20111014	GO:0006623|protein targeting to vacuole GO:0016192|vesicle-mediated transport	GO:0003674|molecular_function	GO:0016020|membrane
pt2_00767	A	A6S	Potri.001G038900	Potri.001G038900(AS) Potri.001G038200(AS) Potri.001G039700(AS) Potri.001G040300(BS) Potri.001G038400(BS) Potri.003G186400(DS)	POPTR_0001s07530	NA	NA	AT1G16170.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G79660.1); Has 55 Blast hits to 55 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:5538874-5539152 REVERSE LENGTH=92	LOC_Os08g16559.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_00768	B	B5S	Potri.T132900	Potri.T132900(BS) Potri.001G040500(BS) Potri.001G038300(BS) Potri.T166600(DS) Potri.001G040800(DS)	POPTR_0001s07540	sp|Q9SA25|WAKLG_ARATH	Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1	AT1G16260.2	| Symbols: | Wall-associated kinase family protein | chr1:5559708-5562018 REVERSE LENGTH=720	LOC_Os04g55760.1	protein|OsWAK55 - OsWAK receptor-like protein kinase, expressed	IMGA|Medtr5g018570.1	Kinase-like protein chr5 6674294-6679204 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0010200|response to chitin GO:0046777|protein autophosphorylation GO:0050832|defense response to fungus	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005509|calcium ion binding GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0016021|integral to membrane
pt2_00769	B	B5S	Potri.T132900	Potri.T132900(BS) Potri.T166600(BS) Potri.001G038300(BS) Potri.001G039900(BS) Potri.001G040800(BS)	POPTR_0001s07550	sp|Q9SA25|WAKLG_ARATH	Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1	AT1G16260.2	| Symbols: | Wall-associated kinase family protein | chr1:5559708-5562018 REVERSE LENGTH=720	LOC_Os04g55760.1	protein|OsWAK55 - OsWAK receptor-like protein kinase, expressed	IMGA|Medtr5g018570.1	Kinase-like protein chr5 6674294-6679204 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0010200|response to chitin GO:0046777|protein autophosphorylation GO:0050832|defense response to fungus	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005509|calcium ion binding GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0016021|integral to membrane
pt2_00770	A	A5S	Potri.001G038700	Potri.001G038700(AS) Potri.001G039300(AS) Potri.T132900(DS) Potri.T166600(DS) Potri.001G040800(DS)	POPTR_0001s07560	sp|Q9SA25|WAKLG_ARATH	Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1	AT1G16260.2	| Symbols: | Wall-associated kinase family protein | chr1:5559708-5562018 REVERSE LENGTH=720	LOC_Os02g02120.1	protein|OsWAK11 - OsWAK receptor-like protein kinase, expressed	IMGA|contig_165180_1.1	Protein kinase family protein contig_165180 198-1567 H PREDN 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005509|calcium ion binding GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005576|extracellular region GO:0016021|integral to membrane
pt2_00771	A	A3S	Potri.001G040400	Potri.001G040400(AS) Potri.001G039000(AS) Potri.001G038500(BS)	POPTR_0001s07580	sp|Q9FMS6|CAF1K_ARATH	Probable CCR4-associated factor 1 homolog 11 OS=Arabidopsis thaliana GN=CAF1-11 PE=2 SV=1	AT5G22250.1	| Symbols: | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr5:7365605-7366441 REVERSE LENGTH=278	LOC_Os02g55300.1	protein|CAF1 family ribonuclease containing protein, putative, expressed	IMGA|Medtr5g097430.1	CCR4-associated factor chr5 41638347-41640331 E EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0000289|nuclear-transcribed mRNA poly(A) tail shortening GO:0002679|respiratory burst involved in defense response GO:0009451|RNA modification GO:0009693|ethylene biosynthetic process GO:0009738|abscisic acid mediated signaling pathway GO:0009814|defense response, incompatible interaction GO:0009873|ethylene mediated signaling pathway GO:0010200|response to chitin GO:0010228|vegetative to reproductive phase transition of meristem GO:0035556|intracellular signal transduction GO:0042742|defense response to bacterium	GO:0003676|nucleic acid binding GO:0004540|ribonuclease activity GO:0008408|3'-5' exonuclease activity	GO:0005634|nucleus
pt2_00772	A	A3S	Potri.001G040600	Potri.001G040600(AS) Potri.001G039100(AS) Potri.001G039800(BS)	POPTR_0001s07590	sp|Q9SA25|WAKLG_ARATH	Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1	AT1G16260.2	| Symbols: | Wall-associated kinase family protein | chr1:5559708-5562018 REVERSE LENGTH=720	LOC_Os02g56420.1	protein|OsWAK23 - OsWAK short gene, expressed	IMGA|contig_165180_1.1	Protein kinase family protein contig_165180 198-1567 H PREDN 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005509|calcium ion binding GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005576|extracellular region GO:0016021|integral to membrane
pt2_00773	G	G2	NA	NA	POPTR_0001s07600	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00774	B	B7S	Potri.001G039200	Potri.001G039200(BS) Potri.001G040800(BS) Potri.T132900(DS) Potri.T166600(DS) Potri.001G040500(DS) Potri.001G038300(DS) Potri.001G039900(DS)	POPTR_0001s07620	sp|Q9SA25|WAKLG_ARATH	Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1	AT1G16260.2	| Symbols: | Wall-associated kinase family protein | chr1:5559708-5562018 REVERSE LENGTH=720	LOC_Os02g02120.1	protein|OsWAK11 - OsWAK receptor-like protein kinase, expressed	IMGA|Medtr5g018570.1	Kinase-like protein chr5 6674294-6679204 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005509|calcium ion binding GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005576|extracellular region GO:0016021|integral to membrane
pt2_00775	A	A2S	Potri.001G040900	Potri.001G040900(AS) Potri.001G040000(DS)	POPTR_0001s07630	sp|Q7X8C5|WAKLB_ARATH	Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1	AT1G16130.1	| Symbols: WAKL2 | wall associated kinase-like 2 | chr1:5525634-5528047 FORWARD LENGTH=748	LOC_Os01g26300.1	protein|OsWAK9 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed	IMGA|Medtr5g018570.1	Kinase-like protein chr5 6674294-6679204 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005509|calcium ion binding GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005576|extracellular region GO:0016021|integral to membrane
pt2_00776	A	A2S	Potri.001G041000	Potri.001G041000(AS) Potri.T132700(BS)	POPTR_0001s07640	sp|Q9SA25|WAKLG_ARATH	Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1	AT1G16260.2	| Symbols: | Wall-associated kinase family protein | chr1:5559708-5562018 REVERSE LENGTH=720	LOC_Os09g38800.1	protein|OsWAK88 - OsWAK pseudogene, expressed	IMGA|contig_165180_1.1	Protein kinase family protein contig_165180 198-1567 H PREDN 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005509|calcium ion binding GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005576|extracellular region GO:0016021|integral to membrane
pt2_00777	A	A4S	Potri.T132700	Potri.T132700(AS) Potri.001G041100(AS) Potri.001G040000(BS) Potri.001G040900(BS)	POPTR_0001s07650	sp|Q8RY17|WAKLI_ARATH	Wall-associated receptor kinase-like 22 OS=Arabidopsis thaliana GN=WAKL22 PE=2 SV=1	AT1G79670.1	| Symbols: RFO1, WAKL22 | Wall-associated kinase family protein | chr1:29976887-29979337 REVERSE LENGTH=751	LOC_Os04g55760.1	protein|OsWAK55 - OsWAK receptor-like protein kinase, expressed	IMGA|Medtr5g018570.1	Kinase-like protein chr5 6674294-6679204 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005509|calcium ion binding GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005576|extracellular region GO:0016021|integral to membrane
pt2_00778	A	A3S	Potri.T132600	Potri.T132600(AS) Potri.001G040100(AS) Potri.001G041200(BS)	POPTR_0001s07660	NA	NA	AT1G16080.1	| Symbols: | unknown protein; LOCATED IN: apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 81 Blast hits to 81 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). | chr1:5514394-5515761 FORWARD LENGTH=313	LOC_Os08g16570.1	protein|expressed protein	NA	NA	GO:0006098|pentose-phosphate shunt GO:0009965|leaf morphogenesis GO:0010027|thylakoid membrane organization GO:0016117|carotenoid biosynthetic process GO:0030154|cell differentiation	NA	GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope GO:0048046|apoplast
pt2_00779	A	A3S	Potri.001G040400	Potri.001G040400(AS) Potri.001G038500(AS) Potri.001G039000(BS)	POPTR_0001s07680	sp|Q9FMS6|CAF1K_ARATH	Probable CCR4-associated factor 1 homolog 11 OS=Arabidopsis thaliana GN=CAF1-11 PE=2 SV=1	AT5G22250.1	| Symbols: | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr5:7365605-7366441 REVERSE LENGTH=278	LOC_Os02g55300.1	protein|CAF1 family ribonuclease containing protein, putative, expressed	IMGA|Medtr5g097430.1	CCR4-associated factor chr5 41638347-41640331 E EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0000289|nuclear-transcribed mRNA poly(A) tail shortening GO:0002679|respiratory burst involved in defense response GO:0009451|RNA modification GO:0009693|ethylene biosynthetic process GO:0009738|abscisic acid mediated signaling pathway GO:0009814|defense response, incompatible interaction GO:0009873|ethylene mediated signaling pathway GO:0010200|response to chitin GO:0010228|vegetative to reproductive phase transition of meristem GO:0035556|intracellular signal transduction GO:0042742|defense response to bacterium	GO:0003676|nucleic acid binding GO:0004540|ribonuclease activity GO:0008408|3'-5' exonuclease activity	GO:0005634|nucleus
pt2_00780	A	A4S	Potri.001G040600	Potri.001G040600(AS) Potri.001G039100(AS) Potri.001G038600(AS) Potri.001G039800(DS)	POPTR_0001s07690	sp|Q9SA25|WAKLG_ARATH	Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1	AT1G16260.2	| Symbols: | Wall-associated kinase family protein | chr1:5559708-5562018 REVERSE LENGTH=720	LOC_Os02g56420.1	protein|OsWAK23 - OsWAK short gene, expressed	IMGA|contig_165180_1.1	Protein kinase family protein contig_165180 198-1567 H PREDN 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005509|calcium ion binding GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005576|extracellular region GO:0016021|integral to membrane
pt2_00781	A	A1S	Potri.001G119900	Potri.001G119900(AS)	POPTR_0001s07700	NA	NA	AT4G12410.1	| Symbols: | SAUR-like auxin-responsive protein family | chr4:7342956-7343429 REVERSE LENGTH=157	LOC_Os02g42990.1	protein|OsSAUR11 - Auxin-responsive SAUR gene family member, expressed	IMGA|Medtr5g021820.1	Auxin-induced protein 6B chr5 8253943-8253169 F EGN_Mt100125 20111014	GO:0009733|response to auxin stimulus	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_00782	A	A1S	Potri.001G119800	Potri.001G119800(AS)	POPTR_0001s07710	sp|P49042|VPE_RICCO	Vacuolar-processing enzyme OS=Ricinus communis PE=1 SV=1	AT1G62710.1	| Symbols: BETA-VPE, BETAVPE | beta vacuolar processing enzyme | chr1:23224070-23226857 REVERSE LENGTH=486	LOC_Os02g43010.1	protein|vacuolar-processing enzyme precursor, putative, expressed	IMGA|contig_50759_1.1	GPI-anchor transamidase contig_50759 196-1875 H PREDN 20111014	GO:0006508|proteolysis GO:0006624|vacuolar protein processing	GO:0004197|cysteine-type endopeptidase activity	NA
pt2_00783	C	C1S	Potri.001G119800	Potri.001G119800(CS)	sp|P49042|VPE_RICCO	Vacuolar-processing enzyme OS=Ricinus communis PE=1 SV=1	AT1G62710.1	| Symbols: BETA-VPE, BETAVPE | beta vacuolar processing enzyme | chr1:23224070-23226857 REVERSE LENGTH=486	LOC_Os02g43010.1	protein|vacuolar-processing enzyme precursor, putative, expressed	IMGA|contig_50759_1.1	GPI-anchor transamidase contig_50759 196-1875 H PREDN 20111014	GO:0006508|proteolysis GO:0006624|vacuolar protein processing	GO:0004197|cysteine-type endopeptidase activity	NA
pt2_00784	A	A1S	Potri.001G119700	Potri.001G119700(AS)	POPTR_0001s07730	sp|A7YVD7|NDUF6_BOVIN	NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Bos taurus GN=NDUFAF6 PE=2 SV=1	AT1G62730.1	| Symbols: | Terpenoid synthases superfamily protein | chr1:23229204-23230118 REVERSE LENGTH=304	LOC_Os06g01470.1	protein|AGAP000326-PA, putative, expressed	IMGA|Medtr5g012060.1	hypothetical protein chr5 3321442-3325626 E EGN_Mt100125 20111014	GO:0006457|protein folding GO:0006626|protein targeting to mitochondrion GO:0009058|biosynthetic process GO:0009408|response to heat GO:0009644|response to high light intensity GO:0042542|response to hydrogen peroxide	GO:0016740|transferase activity	GO:0009507|chloroplast
pt2_00785	A	A1S	Potri.001G119600	Potri.001G119600(AS)	POPTR_0001s07740	NA	NA	NA	NA	LOC_Os08g34300.1	protein|retrotransposon protein, putative, unclassified, expressed	NA	NA	NA	NA	NA
pt2_00786	A	A1S	Potri.001G119500	Potri.001G119500(AS)	POPTR_0001s07750	sp|Q43468|STIP_SOYBN	Heat shock protein STI OS=Glycine max GN=STI PE=2 SV=1	AT4G12400.2	| Symbols: Hop3 | stress-inducible protein, putative | chr4:7338866-7341239 REVERSE LENGTH=558	LOC_Os02g43020.1	protein|heat shock protein STI, putative, expressed	IMGA|Medtr5g012030.1	Stress-induced-phosphoprotein chr5 3312809-3308439 F EGN_Mt100125 20111014	GO:0006457|protein folding GO:0006950|response to stress GO:0009408|response to heat GO:0009644|response to high light intensity GO:0010286|heat acclimation GO:0034976|response to endoplasmic reticulum stress GO:0042542|response to hydrogen peroxide	NA	NA
pt2_00787	A	A2S	Potri.001G119500	Potri.001G119500(AS) Potri.003G113400(DS)	POPTR_0001s07750	sp|Q43468|STIP_SOYBN	Heat shock protein STI OS=Glycine max GN=STI PE=2 SV=1	AT4G12400.2	| Symbols: Hop3 | stress-inducible protein, putative | chr4:7338866-7341239 REVERSE LENGTH=558	LOC_Os02g43020.1	protein|heat shock protein STI, putative, expressed	IMGA|Medtr5g012030.1	Stress-induced-phosphoprotein chr5 3312809-3308439 F EGN_Mt100125 20111014	GO:0006457|protein folding GO:0006950|response to stress GO:0009408|response to heat GO:0009644|response to high light intensity GO:0010286|heat acclimation GO:0034976|response to endoplasmic reticulum stress GO:0042542|response to hydrogen peroxide	NA	NA
pt2_00788	A	A1S	Potri.001G119500	Potri.001G119500(AS)	POPTR_0001s07750	sp|Q43468|STIP_SOYBN	Heat shock protein STI OS=Glycine max GN=STI PE=2 SV=1	AT4G12400.2	| Symbols: Hop3 | stress-inducible protein, putative | chr4:7338866-7341239 REVERSE LENGTH=558	LOC_Os02g43020.1	protein|heat shock protein STI, putative, expressed	IMGA|Medtr5g012030.1	Stress-induced-phosphoprotein chr5 3312809-3308439 F EGN_Mt100125 20111014	GO:0006457|protein folding GO:0006950|response to stress GO:0009408|response to heat GO:0009644|response to high light intensity GO:0010286|heat acclimation GO:0034976|response to endoplasmic reticulum stress GO:0042542|response to hydrogen peroxide	NA	NA
pt2_00789	A	A1S	Potri.001G119400	Potri.001G119400(AS)	POPTR_0001s07770	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00790	A	A1S	Potri.001G119300	Potri.001G119300(AS)	POPTR_0001s07780	sp|P17407|21KD_DAUCA	21 kDa protein OS=Daucus carota PE=2 SV=1	AT1G62760.1	| Symbols: | Plant invertase/pectin methylesterase inhibitor superfamily protein | chr1:23237574-23238512 REVERSE LENGTH=312	LOC_Os06g49760.1	protein|invertase/pectin methylesterase inhibitor family protein, putative, expressed	IMGA|Medtr5g012000.1	Pectinesterase chr5 3301058-3301989 F EGN_Mt100125 20111014	NA	GO:0004857|enzyme inhibitor activity GO:0030599|pectinesterase activity GO:0046910|pectinesterase inhibitor activity	GO:0005886|plasma membrane
pt2_00791	A	A1S	Potri.001G119200	Potri.001G119200(AS)	POPTR_0001s07790	sp|P17407|21KD_DAUCA	21 kDa protein OS=Daucus carota PE=2 SV=1	AT1G62770.1	| Symbols: | Plant invertase/pectin methylesterase inhibitor superfamily protein | chr1:23246085-23246836 REVERSE LENGTH=204	LOC_Os06g49760.1	protein|invertase/pectin methylesterase inhibitor family protein, putative, expressed	IMGA|Medtr5g012000.1	Pectinesterase chr5 3301058-3301989 F EGN_Mt100125 20111014	GO:0010014|meristem initiation GO:0010089|xylem development	GO:0004857|enzyme inhibitor activity GO:0030599|pectinesterase activity GO:0046910|pectinesterase inhibitor activity	NA
pt2_00792	A	A1S	Potri.001G119100	Potri.001G119100(AS)	POPTR_0001s07800	NA	NA	AT1G62780.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; Has 94 Blast hits to 94 proteins in 35 species: Archae - 6; Bacteria - 10; Metazoa - 21; Fungi - 2; Plants - 48; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). | chr1:23249349-23251066 REVERSE LENGTH=237	LOC_Os04g01540.1	protein|expressed protein	IMGA|Medtr5g011990.1	hypothetical protein chr5 3298110-3300397 F EGN_Mt100125 20111014	GO:0000023|maltose metabolic process GO:0006098|pentose-phosphate shunt GO:0008150|biological_process GO:0009902|chloroplast relocation GO:0010027|thylakoid membrane organization GO:0019252|starch biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0034660|ncRNA metabolic process	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_00793	A	A1S	Potri.001G119000	Potri.001G119000(AS)	POPTR_0001s07810	sp|Q9FFY3|VAS_ARATH	Lipid transfer-like protein VAS OS=Arabidopsis thaliana GN=VAS PE=2 SV=1	AT1G62790.2	| Symbols: | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr1:23252369-23253481 FORWARD LENGTH=149	LOC_Os06g47200.1	protein|LTPL85 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	IMGA|Medtr5g011950.1	Lipid binding protein chr5 3284359-3281892 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006869|lipid transport	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004675|transmembrane receptor protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0008289|lipid binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane GO:0031225|anchored to membrane
pt2_00794	A	A2S	Potri.001G118900	Potri.001G118900(AS) Potri.003G114000(DS)	POPTR_0001s07820	sp|Q93YR3|F10AL_ARATH	FAM10 family protein At4g22670 OS=Arabidopsis thaliana GN=At4g22670 PE=1 SV=1	AT4G22670.1	| Symbols: AtHip1, HIP1, TPR11 | HSP70-interacting protein 1 | chr4:11918236-11920671 FORWARD LENGTH=441	LOC_Os02g01030.4	protein|tetratricopeptide repeat domain containing protein, expressed	IMGA|Medtr5g012030.1	Stress-induced-phosphoprotein chr5 3312809-3308439 F EGN_Mt100125 20111014	GO:0006457|protein folding GO:0010286|heat acclimation GO:0045454|cell redox homeostasis GO:0046686|response to cadmium ion GO:0051259|protein oligomerization	GO:0005515|protein binding GO:0016671|oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor GO:0030544|Hsp70 protein binding	GO:0005575|cellular_component GO:0005737|cytoplasm GO:0005829|cytosol
pt2_00795	A	A1S	Potri.001G118800	Potri.001G118800(AS)	POPTR_0001s07830	sp|Q50EX6|ODO1_PETHY	Protein ODORANT1 OS=Petunia hybrida GN=ODO1 PE=2 SV=1	AT4G12350.1	| Symbols: MYB42, AtMYB42 | myb domain protein 42 | chr4:7324912-7326636 FORWARD LENGTH=286	LOC_Os09g36250.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr5g078140.1	P-type R2R3 Myb protein chr5 32379000-32381283 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:2000652|regulation of secondary cell wall biogenesis	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00796	A	A1S	Potri.001G118700	Potri.001G118700(AS)	POPTR_0001s07840	NA	NA	AT4G12340.1	| Symbols: | copper ion binding | chr4:7321492-7322004 REVERSE LENGTH=170	LOC_Os05g01300.1	protein|expressed protein	IMGA|contig_51980_2.1	CHCH domain containing protein contig_51980 143-4789 F PREDN 20111014	GO:0008150|biological_process	GO:0005507|copper ion binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00797	A	A1S	Potri.001G118500	Potri.001G118500(AS)	POPTR_0001s07850	sp|P37120|C75A2_SOLME	Flavonoid 3',5'-hydroxylase OS=Solanum melongena GN=CYP75A2 PE=2 SV=1	AT4G12320.1	| Symbols: CYP706A6 | cytochrome P450, family 706, subfamily A, polypeptide 6 | chr4:7314939-7316647 REVERSE LENGTH=518	LOC_Os08g43440.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g007460.1	Cytochrome P450 monooxygenase chr5 1131766-1133659 E EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005783|endoplasmic reticulum GO:0009507|chloroplast
pt2_00798	A	A1S	Potri.001G118400	Potri.001G118400(AS)	POPTR_0001s07860	sp|Q42798|C93A1_SOYBN	Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=2 SV=1	AT4G12300.1	| Symbols: CYP706A4 | cytochrome P450, family 706, subfamily A, polypeptide 4 | chr4:7308016-7309692 REVERSE LENGTH=516	LOC_Os01g50490.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g007460.1	Cytochrome P450 monooxygenase chr5 1131766-1133659 E EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_00799	A	A1S	Potri.001G118300	Potri.001G118300(AS)	POPTR_0001s07870	sp|Q8H1H9|AMO_ARATH	Primary amine oxidase OS=Arabidopsis thaliana GN=At1g62810 PE=2 SV=1	AT4G12290.1	| Symbols: | Copper amine oxidase family protein | chr4:7304434-7306973 FORWARD LENGTH=741	LOC_Os04g20164.1	protein|amine oxidase precursor, putative, expressed	IMGA|Medtr1g104590.1	Primary amine oxidase chr1 30734464-30731628 E EGN_Mt100125 20111014	GO:0009308|amine metabolic process GO:0055114|oxidation-reduction process	GO:0005507|copper ion binding GO:0008131|primary amine oxidase activity GO:0048038|quinone binding	GO:0005576|extracellular region GO:0005768|endosome GO:0005773|vacuole GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_00800	A	A1S	Potri.001G118200	Potri.001G118200(AS)	POPTR_0001s07880	sp|Q8H1H9|AMO_ARATH	Primary amine oxidase OS=Arabidopsis thaliana GN=At1g62810 PE=2 SV=1	AT1G62810.1	| Symbols: | Copper amine oxidase family protein | chr1:23258253-23261772 REVERSE LENGTH=712	LOC_Os04g20164.1	protein|amine oxidase precursor, putative, expressed	IMGA|Medtr1g104590.1	Primary amine oxidase chr1 30734464-30731628 E EGN_Mt100125 20111014	GO:0006809|nitric oxide biosynthetic process GO:0009308|amine metabolic process GO:0009738|abscisic acid mediated signaling pathway GO:0055114|oxidation-reduction process	GO:0005507|copper ion binding GO:0008131|primary amine oxidase activity GO:0048038|quinone binding	GO:0005576|extracellular region
pt2_00801	A	A1S	Potri.001G118100	Potri.001G118100(AS)	POPTR_0001s07890	sp|P42798|R15A1_ARATH	40S ribosomal protein S15a-1 OS=Arabidopsis thaliana GN=RPS15AA PE=2 SV=2	AT5G59850.1	| Symbols: | Ribosomal protein S8 family protein | chr5:24112499-24113084 REVERSE LENGTH=130	LOC_Os02g27760.1	protein|40S ribosomal protein S15a, putative, expressed	IMGA|Medtr1g105370.1	40S ribosomal protein S15a chr1 31153886-31151645 E EGN_Mt100125 20111014	GO:0001510|RNA methylation GO:0006412|translation GO:0009664|plant-type cell wall organization GO:0042545|cell wall modification	GO:0003735|structural constituent of ribosome	GO:0005618|cell wall GO:0005622|intracellular GO:0005774|vacuolar membrane GO:0005829|cytosol GO:0005840|ribosome GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0009507|chloroplast GO:0016020|membrane GO:0022626|cytosolic ribosome GO:0022627|cytosolic small ribosomal subunit
pt2_00802	A	A1S	Potri.001G118000	Potri.001G118000(AS)	POPTR_0001s07900	sp|Q8MJJ1|SPG21_BOVIN	Maspardin OS=Bos taurus GN=SPG21 PE=2 SV=1	AT4G12230.1	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr4:7284645-7287348 FORWARD LENGTH=392	LOC_Os10g08840.2	protein|hydrolase, alpha/beta fold family domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003824|catalytic activity	GO:0005737|cytoplasm
pt2_00803	C	C1A	Potri.001G118000	Potri.001G118000(CA)	sp|Q8MJJ1|SPG21_BOVIN	Maspardin OS=Bos taurus GN=SPG21 PE=2 SV=1	AT4G12230.1	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr4:7284645-7287348 FORWARD LENGTH=392	LOC_Os10g08840.2	protein|hydrolase, alpha/beta fold family domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003824|catalytic activity	GO:0005737|cytoplasm
pt2_00804	A	A1S	Potri.001G117900	Potri.001G117900(AS)	POPTR_0001s07920	sp|Q94AZ4|CML13_ARATH	Probable calcium-binding protein CML13 OS=Arabidopsis thaliana GN=CML13 PE=1 SV=1	AT1G12310.1	| Symbols: | Calcium-binding EF-hand family protein | chr1:4187500-4187946 REVERSE LENGTH=148	LOC_Os08g02420.1	protein|OsCML7 - Calmodulin-related calcium sensor protein, expressed	IMGA|Medtr5g011850.1	EF hand family protein chr5 3229722-3230672 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0005509|calcium ion binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane
pt2_00805	A	A2S	Potri.001G117800	Potri.001G117800(AS) Potri.003G115100(DS)	POPTR_0001s07930	sp|Q6R2J8|SRF8_ARATH	Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1	AT4G22730.1	| Symbols: | Leucine-rich repeat protein kinase family protein | chr4:11941384-11943696 FORWARD LENGTH=688	LOC_Os06g04370.1	protein|expressed protein	IMGA|Medtr5g011840.1	Receptor-like protein kinase chr5 3227916-3224655 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_00806	A	A1S	Potri.001G117700	Potri.001G117700(AS)	POPTR_0001s07940	sp|Q4P7A4|CAF17_USTMA	Putative transferase CAF17, mitochondrial OS=Ustilago maydis (strain 521 / FGSC 9021) GN=CAF17 PE=3 SV=1	AT4G12130.1	| Symbols: | Glycine cleavage T-protein family | chr4:7263640-7265425 FORWARD LENGTH=393	LOC_Os06g04380.1	protein|aminomethyltransferase, putative, expressed	NA	NA	GO:0006546|glycine catabolic process GO:0019243|methylglyoxal catabolic process to D-lactate	GO:0004047|aminomethyltransferase activity	GO:0005737|cytoplasm GO:0005739|mitochondrion
pt2_00807	A	A2S	Potri.001G117600	Potri.001G117600(AS) Potri.003G115200(DS)	POPTR_0001s07950	NA	NA	AT2G45360.1	| Symbols: | Protein of unknown function (DUF1442) | chr2:18698619-18699360 FORWARD LENGTH=215	LOC_Os02g25780.1	protein|expressed protein	IMGA|Medtr5g011800.1	hypothetical protein chr5 3209629-3208620 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_00808	A	A1S	Potri.001G117500	Potri.001G117500(AS)	POPTR_0001s07970	sp|Q8R035|ICT1_MOUSE	Peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Mus musculus GN=Ict1 PE=1 SV=1	AT1G62850.3	| Symbols: | Class I peptide chain release factor | chr1:23272608-23274211 REVERSE LENGTH=236	LOC_Os03g14510.1	protein|immature colon carcinoma transcript 1 protein precursor, putative, expressed	NA	NA	GO:0006415|translational termination	GO:0003747|translation release factor activity	GO:0005739|mitochondrion
pt2_00809	A	A1S	Potri.001G117400	Potri.001G117400(AS)	POPTR_0001s07980	NA	NA	AT4G22740.2	| Symbols: | glycine-rich protein | chr4:11944050-11945565 REVERSE LENGTH=356	LOC_Os08g02460.1	protein|expressed protein	NA	NA	NA	GO:0003674|molecular_function	GO:0005886|plasma membrane
pt2_00810	A	A1S	Potri.001G117200	Potri.001G117200(AS)	POPTR_0001s07990	sp|Q94AH6|CUL1_ARATH	Cullin-1 OS=Arabidopsis thaliana GN=CUL1 PE=1 SV=1	AT4G02570.4	| Symbols: CUL1 | cullin 1 | chr4:1129315-1133435 FORWARD LENGTH=738	LOC_Os01g27150.1	protein|cullin, putative, expressed	IMGA|Medtr5g039880.1	Cullin 3-like protein chr5 17133647-17138844 E EGN_Mt100125 20111014	GO:0006396|RNA processing GO:0006486|protein glycosylation GO:0006499|N-terminal protein myristoylation GO:0006511|ubiquitin-dependent protein catabolic process GO:0006888|ER to Golgi vesicle-mediated transport GO:0007062|sister chromatid cohesion GO:0009733|response to auxin stimulus GO:0009753|response to jasmonic acid stimulus GO:0009790|embryo development GO:0009793|embryo development ending in seed dormancy GO:0009867|jasmonic acid mediated signaling pathway GO:0009880|embryonic pattern specification GO:0010072|primary shoot apical meristem specification GO:0010162|seed dormancy process GO:0010265|SCF complex assembly GO:0010431|seed maturation GO:0010564|regulation of cell cycle process GO:0042752|regulation of circadian rhythm GO:0043090|amino acid import GO:0045595|regulation of cell differentiation GO:0048316|seed development GO:0048366|leaf development GO:0048825|cotyledon development	GO:0005515|protein binding GO:0031625|ubiquitin protein ligase binding	GO:0000151|ubiquitin ligase complex GO:0000794|condensed nuclear chromosome GO:0005634|nucleus GO:0005737|cytoplasm GO:0005819|spindle GO:0005829|cytosol GO:0009524|phragmoplast
pt2_00811	A	A1S	Potri.001G117100	Potri.001G117100(AS)	POPTR_0001s08000	sp|Q8VYP5|ZDH14_ARATH	Probable S-acyltransferase At3g60800 OS=Arabidopsis thaliana GN=At3g60800 PE=2 SV=1	AT3G60800.1	| Symbols: | DHHC-type zinc finger family protein | chr3:22467486-22469273 REVERSE LENGTH=307	LOC_Os03g58960.1	protein|DHHC zinc finger domain containing protein, expressed	IMGA|Medtr1g098390.1	Palmitoyltransferase SWF1 chr1 28233746-28237541 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0008270|zinc ion binding	GO:0005794|Golgi apparatus
pt2_00812	A	A1S	Potri.001G117000	Potri.001G117000(AS)	POPTR_0001s08010	NA	NA	AT1G12330.1	| Symbols: | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G12900.1); Has 249 Blast hits to 249 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 14; Plants - 217; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). | chr1:4194673-4196627 FORWARD LENGTH=505	LOC_Os08g39740.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	NA	GO:0009507|chloroplast
pt2_00813	A	A2S	Potri.001G116900	Potri.001G116900(AS) Potri.003G115800(DS)	POPTR_0001s08020	sp|Q9C5X3|KEULE_ARATH	SNARE-interacting protein KEULE OS=Arabidopsis thaliana GN=KEU PE=1 SV=2	AT1G12360.1	| Symbols: KEU | Sec1/munc18-like (SM) proteins superfamily | chr1:4201172-4206144 FORWARD LENGTH=666	LOC_Os02g25580.1	protein|Sec1 family transport protein, putative, expressed	IMGA|Medtr5g011790.1	SNARE-interacting protein KEULE chr5 3206430-3198451 F EGN_Mt100125 20111014	GO:0006623|protein targeting to vacuole GO:0006904|vesicle docking involved in exocytosis GO:0006944|cellular membrane fusion GO:0009306|protein secretion GO:0010200|response to chitin GO:0016192|vesicle-mediated transport GO:0030968|endoplasmic reticulum unfolded protein response GO:0048193|Golgi vesicle transport	GO:0005515|protein binding GO:0008565|protein transporter activity	GO:0005773|vacuole GO:0005829|cytosol GO:0005886|plasma membrane GO:0019898|extrinsic to membrane
pt2_00814	A	A1S	Potri.001G116800	Potri.001G116800(AS)	POPTR_0001s08030	sp|Q9SB00|PHR_ARATH	Deoxyribodipyrimidine photo-lyase OS=Arabidopsis thaliana GN=PHR1 PE=2 SV=1	AT1G12370.2	| Symbols: PHR1, UVR2 | photolyase 1 | chr1:4206500-4208842 REVERSE LENGTH=496	LOC_Os10g08580.1	protein|FAD binding domain of DNA photolyase domain containing protein, expressed	IMGA|Medtr5g011780.1	CPD photolyase chr5 3193863-3197043 E EGN_Mt100125 20111014	GO:0000719|photoreactive repair GO:0006281|DNA repair GO:0009650|UV protection	GO:0003904|deoxyribodipyrimidine photo-lyase activity GO:0003913|DNA photolyase activity	NA
pt2_00815	A	A1S	Potri.001G116800	Potri.001G116800(AS)	POPTR_0001s08030	sp|Q9SB00|PHR_ARATH	Deoxyribodipyrimidine photo-lyase OS=Arabidopsis thaliana GN=PHR1 PE=2 SV=1	AT1G12370.2	| Symbols: PHR1, UVR2 | photolyase 1 | chr1:4206500-4208842 REVERSE LENGTH=496	LOC_Os10g08580.1	protein|FAD binding domain of DNA photolyase domain containing protein, expressed	IMGA|Medtr5g011780.1	CPD photolyase chr5 3193863-3197043 E EGN_Mt100125 20111014	GO:0000719|photoreactive repair GO:0006281|DNA repair GO:0009650|UV protection	GO:0003904|deoxyribodipyrimidine photo-lyase activity GO:0003913|DNA photolyase activity	NA
pt2_00816	A	A2S	Potri.001G116800	Potri.001G116800(AS) Potri.001G116900(AA)	POPTR_0001s08030	sp|Q9SB00|PHR_ARATH	Deoxyribodipyrimidine photo-lyase OS=Arabidopsis thaliana GN=PHR1 PE=2 SV=1	AT1G12370.2	| Symbols: PHR1, UVR2 | photolyase 1 | chr1:4206500-4208842 REVERSE LENGTH=496	LOC_Os10g08580.1	protein|FAD binding domain of DNA photolyase domain containing protein, expressed	IMGA|Medtr5g011780.1	CPD photolyase chr5 3193863-3197043 E EGN_Mt100125 20111014	GO:0000719|photoreactive repair GO:0006281|DNA repair GO:0009650|UV protection	GO:0003904|deoxyribodipyrimidine photo-lyase activity GO:0003913|DNA photolyase activity	NA
pt2_00817	A	A1S	Potri.001G116600	Potri.001G116600(AS)	POPTR_0001s08040	NA	NA	AT1G62870.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12380.1); Has 351 Blast hits to 343 proteins in 42 species: Archae - 2; Bacteria - 0; Metazoa - 27; Fungi - 5; Plants - 299; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). | chr1:23284220-23286508 REVERSE LENGTH=762	LOC_Os02g25230.1	protein|expressed protein	NA	NA	NA	NA	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_00818	A	A2S	Potri.001G116500	Potri.001G116500(AS) Potri.003G116000(BS)	POPTR_0001s08050	sp|Q8L7W5|SMO11_ARATH	Methylsterol monooxygenase 1-1 OS=Arabidopsis thaliana GN=SMO1-1 PE=1 SV=1	AT4G12110.1	| Symbols: SMO1-1, ATSMO1, ATSMO1-1 | sterol-4alpha-methyl oxidase 1-1 | chr4:7254197-7256004 FORWARD LENGTH=298	LOC_Os10g39810.1	protein|fatty acid hydroxylase, putative, expressed	IMGA|Medtr5g035190.1	Sterol 4-alpha-methyl-oxidase chr5 14887526-14890800 F EGN_Mt100125 20111014	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0006084|acetyl-CoA metabolic process GO:0006633|fatty acid biosynthetic process GO:0006816|calcium ion transport GO:0007030|Golgi organization GO:0009086|methionine biosynthetic process GO:0009651|response to salt stress GO:0016126|sterol biosynthetic process GO:0016132|brassinosteroid biosynthetic process GO:0046520|sphingoid biosynthetic process GO:0055114|oxidation-reduction process	GO:0000254|C-4 methylsterol oxidase activity GO:0003824|catalytic activity GO:0005506|iron ion binding GO:0016491|oxidoreductase activity GO:0080064|4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha-methyl oxidase activity	GO:0016020|membrane
pt2_00819	A	A1S	Potri.001G116300	Potri.001G116300(AS)	POPTR_0001s08060	sp|P0C8Q5|PP336_ARATH	Pentatricopeptide repeat-containing protein At4g22760 OS=Arabidopsis thaliana GN=PCMP-E6 PE=2 SV=1	AT4G22760.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:11960553-11962289 FORWARD LENGTH=578	LOC_Os08g06490.1	protein|pentatricopeptide, putative, expressed	IMGA|Medtr5g006420.1	Pentatricopeptide repeat-containing protein chr5 674856-677668 E EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005739|mitochondrion
pt2_00820	A	A1S	Potri.001G116200	Potri.001G116200(AS)	POPTR_0001s08070	sp|Q56XJ7|Y4276_ARATH	Uncharacterized protein At4g22758 OS=Arabidopsis thaliana GN=At4g22758 PE=2 SV=1	AT4G22758.1	| Symbols: | unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G27830.1). | chr4:11958477-11959904 FORWARD LENGTH=255	LOC_Os02g25080.1	protein|expressed protein	IMGA|Medtr5g011770.1	hypothetical protein chr5 3187220-3185337 H EGN_Mt100125 20111014	NA	NA	GO:0005634|nucleus
pt2_00821	A	A2S	Potri.001G116100	Potri.001G116100(AS) Potri.003G116400(DS)	POPTR_0001s08080	sp|Q84W04|CNIH4_ARATH	Protein cornichon homolog 4 OS=Arabidopsis thaliana GN=At1g12390 PE=1 SV=1	AT1G12390.1	| Symbols: | Cornichon family protein | chr1:4220347-4221481 FORWARD LENGTH=137	LOC_Os06g04500.1	protein|cornichon protein, putative, expressed	IMGA|Medtr5g011690.1	ER-derived vesicles protein ERV14 chr5 3162982-3160840 F EGN_Mt100125 20111014	GO:0035556|intracellular signal transduction	GO:0005515|protein binding	GO:0016020|membrane
pt2_00822	A	A2S	Potri.001G116000	Potri.001G116000(AS) Potri.009G138800(DS)	POPTR_0001s08090	NA	NA	AT1G12400.1	| Symbols: | Nucleotide excision repair, TFIIH, subunit TTDA | chr1:4222296-4222603 FORWARD LENGTH=71	LOC_Os07g38600.1	protein|REX1 DNA Repair family protein, expressed	IMGA|Medtr5g055890.1	General transcription factor IIH subunit chr5 22473661-22476041 F EGN_Mt100125 20111014	GO:0006289|nucleotide-excision repair	GO:0003677|DNA binding	GO:0005634|nucleus
pt2_00823	A	A1S	Potri.001G115900	Potri.001G115900(AS)	POPTR_0001s08100	sp|Q9XJ36|CLPR2_ARATH	ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic OS=Arabidopsis thaliana GN=CLPR2 PE=1 SV=1	AT1G12410.1	| Symbols: CLPR2, NCLPP2, CLP2 | CLP protease proteolytic subunit 2 | chr1:4223099-4224954 FORWARD LENGTH=279	LOC_Os06g04530.1	protein|OsClp9 - Putative Clp protease homologue, expressed	IMGA|Medtr1g086940.1	ATP-dependent Clp protease proteolytic subunit chr1 23268149-23273759 F EGN_Mt100125 20111014	GO:0006364|rRNA processing GO:0006508|proteolysis GO:0009658|chloroplast organization GO:0009902|chloroplast relocation GO:0010027|thylakoid membrane organization GO:0010207|photosystem II assembly GO:0034660|ncRNA metabolic process GO:0035304|regulation of protein dephosphorylation GO:0042793|transcription from plastid promoter GO:0045893|positive regulation of transcription, DNA-dependent	GO:0004252|serine-type endopeptidase activity	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009570|chloroplast stroma GO:0009840|chloroplastic endopeptidase Clp complex GO:0009941|chloroplast envelope GO:0010287|plastoglobule
pt2_00824	A	A1S	Potri.001G115900	Potri.001G115900(AS)	POPTR_0001s08100	sp|Q9XJ36|CLPR2_ARATH	ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic OS=Arabidopsis thaliana GN=CLPR2 PE=1 SV=1	AT1G12410.1	| Symbols: CLPR2, NCLPP2, CLP2 | CLP protease proteolytic subunit 2 | chr1:4223099-4224954 FORWARD LENGTH=279	LOC_Os06g04530.1	protein|OsClp9 - Putative Clp protease homologue, expressed	IMGA|Medtr1g086940.1	ATP-dependent Clp protease proteolytic subunit chr1 23268149-23273759 F EGN_Mt100125 20111014	GO:0006364|rRNA processing GO:0006508|proteolysis GO:0009658|chloroplast organization GO:0009902|chloroplast relocation GO:0010027|thylakoid membrane organization GO:0010207|photosystem II assembly GO:0034660|ncRNA metabolic process GO:0035304|regulation of protein dephosphorylation GO:0042793|transcription from plastid promoter GO:0045893|positive regulation of transcription, DNA-dependent	GO:0004252|serine-type endopeptidase activity	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009570|chloroplast stroma GO:0009840|chloroplastic endopeptidase Clp complex GO:0009941|chloroplast envelope GO:0010287|plastoglobule
pt2_00825	A	A1S	Potri.001G115800	Potri.001G115800(AS)	POPTR_0001s08110	NA	NA	AT4G12080.1	| Symbols: AHL1, ATAHL1 | AT-hook motif nuclear-localized protein 1 | chr4:7239466-7241246 FORWARD LENGTH=356	LOC_Os08g02490.1	protein|AT hook motif domain containing protein, expressed	IMGA|contig_62590_1.1	AT-hook motif nuclear localized protein contig_62590 587-3109 E PREDN 20111014	GO:0016132|brassinosteroid biosynthetic process	GO:0003677|DNA binding	GO:0005634|nucleus GO:0005730|nucleolus GO:0005737|cytoplasm GO:0005739|mitochondrion
pt2_00826	A	A1S	Potri.001G115600	Potri.001G115600(AS)	POPTR_0001s08130	NA	NA	AT1G12420.1	| Symbols: ACR8 | ACT domain repeat 8 | chr1:4226673-4228917 REVERSE LENGTH=441	LOC_Os03g14370.2	protein|ACT domain containing protein, expressed	IMGA|Medtr5g011580.1	hypothetical protein chr5 3120961-3123634 E EGN_Mt100125 20111014	GO:0008152|metabolic process GO:0009737|response to abscisic acid stimulus	GO:0016597|amino acid binding	GO:0005575|cellular_component
pt2_00827	A	A1S	Potri.001G115500	Potri.001G115500(AS)	POPTR_0001s08140	sp|Q8GW78|CLP41_ARATH	Clp protease-related protein At4g12060, chloroplastic OS=Arabidopsis thaliana GN=At4g12060 PE=1 SV=1	AT4G12060.1	| Symbols: | Double Clp-N motif protein | chr4:7228269-7229898 REVERSE LENGTH=241	LOC_Os03g14280.1	protein|ATP-dependent Clp protease ATP-binding subunit, putative, expressed	IMGA|Medtr5g011550.1	ATP-dependent Clp protease ATP-binding subunit clpA-like protein chr5 3115136-3111956 F EGN_Mt100125 20111014	GO:0006569|tryptophan catabolic process GO:0009684|indoleacetic acid biosynthetic process GO:0019538|protein metabolic process	GO:0005524|ATP binding GO:0043424|protein histidine kinase binding	GO:0009507|chloroplast GO:0009532|plastid stroma GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope
pt2_00828	A	A1S	Potri.001G115500	Potri.001G115500(AS)	POPTR_0001s08140	sp|Q8GW78|CLP41_ARATH	Clp protease-related protein At4g12060, chloroplastic OS=Arabidopsis thaliana GN=At4g12060 PE=1 SV=1	AT4G12060.1	| Symbols: | Double Clp-N motif protein | chr4:7228269-7229898 REVERSE LENGTH=241	LOC_Os03g14280.1	protein|ATP-dependent Clp protease ATP-binding subunit, putative, expressed	IMGA|Medtr5g011550.1	ATP-dependent Clp protease ATP-binding subunit clpA-like protein chr5 3115136-3111956 F EGN_Mt100125 20111014	GO:0006569|tryptophan catabolic process GO:0009684|indoleacetic acid biosynthetic process GO:0019538|protein metabolic process	GO:0005524|ATP binding GO:0043424|protein histidine kinase binding	GO:0009507|chloroplast GO:0009532|plastid stroma GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope
pt2_00829	C	C1S	Potri.001G115500	Potri.001G115500(CS)	sp|Q8GW78|CLP41_ARATH	Clp protease-related protein At4g12060, chloroplastic OS=Arabidopsis thaliana GN=At4g12060 PE=1 SV=1	AT4G12060.1	| Symbols: | Double Clp-N motif protein | chr4:7228269-7229898 REVERSE LENGTH=241	LOC_Os03g14280.1	protein|ATP-dependent Clp protease ATP-binding subunit, putative, expressed	IMGA|Medtr5g011550.1	ATP-dependent Clp protease ATP-binding subunit clpA-like protein chr5 3115136-3111956 F EGN_Mt100125 20111014	GO:0006569|tryptophan catabolic process GO:0009684|indoleacetic acid biosynthetic process GO:0019538|protein metabolic process	GO:0005524|ATP binding GO:0043424|protein histidine kinase binding	GO:0009507|chloroplast GO:0009532|plastid stroma GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope
pt2_00830	A	A1A	Potri.001G115500	Potri.001G115500(AA)	POPTR_0001s08150	sp|Q8GW78|CLP41_ARATH	Clp protease-related protein At4g12060, chloroplastic OS=Arabidopsis thaliana GN=At4g12060 PE=1 SV=1	AT4G12060.1	| Symbols: | Double Clp-N motif protein | chr4:7228269-7229898 REVERSE LENGTH=241	LOC_Os03g14280.1	protein|ATP-dependent Clp protease ATP-binding subunit, putative, expressed	IMGA|Medtr5g011550.1	ATP-dependent Clp protease ATP-binding subunit clpA-like protein chr5 3115136-3111956 F EGN_Mt100125 20111014	GO:0006569|tryptophan catabolic process GO:0009684|indoleacetic acid biosynthetic process GO:0019538|protein metabolic process	GO:0005524|ATP binding GO:0043424|protein histidine kinase binding	GO:0009507|chloroplast GO:0009532|plastid stroma GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope
pt2_00831	A	A1S	Potri.001G115400	Potri.001G115400(AS)	POPTR_0001s08160	sp|Q8RWF5|MATE9_ARATH	MATE efflux family protein 9 OS=Arabidopsis thaliana GN=DTXL5 PE=2 SV=1	AT4G22790.1	| Symbols: | MATE efflux family protein | chr4:11975153-11976628 REVERSE LENGTH=491	LOC_Os03g64150.1	protein|MATE efflux family protein, putative, expressed	IMGA|Medtr5g011540.1	Multidrug and toxin extrusion protein chr5 3109930-3111465 H EGN_Mt100125 20111014	GO:0006855|drug transmembrane transport GO:0055085|transmembrane transport	GO:0005215|transporter activity GO:0015238|drug transmembrane transporter activity GO:0015297|antiporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_00832	A	A1S	Potri.001G115300	Potri.001G115300(AS)	POPTR_0001s08170	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00833	G	G1	NA	NA	POPTR_0001s08180	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00834	B	B1S	Potri.001G115200	Potri.001G115200(BS)	POPTR_0001s08190	sp|Q9S7C9|ESCA_ARATH	Putative DNA-binding protein ESCAROLA OS=Arabidopsis thaliana GN=ESC PE=2 SV=1	AT4G22810.1	| Symbols: | Predicted AT-hook DNA-binding family protein | chr4:11984432-11985406 FORWARD LENGTH=324	LOC_Os02g25020.1	protein|DNA binding protein, putative, expressed	IMGA|contig_74397_1.1	AT-hook motif nuclear localized protein contig_74397 1922-494 F PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_00835	A	A1S	Potri.001G115100	Potri.001G115100(AS)	POPTR_0001s08200	sp|Q9FZ06|ARK3_ARATH	Armadillo repeat-containing kinesin-like protein 3 OS=Arabidopsis thaliana GN=ARK3 PE=1 SV=1	AT1G12430.1	| Symbols: PAK, ARK3 | armadillo repeat kinesin 3 | chr1:4234122-4238552 REVERSE LENGTH=919	LOC_Os06g04560.1	protein|kinesin motor domain containing protein, expressed	IMGA|Medtr5g011500.1	Kinesin-1 chr5 3071430-3079425 H EGN_Mt100125 20111014	GO:0009855|determination of bilateral symmetry GO:0009887|organ morphogenesis GO:0010051|xylem and phloem pattern formation GO:0048439|flower morphogenesis GO:0048519|negative regulation of biological process	GO:0003777|microtubule motor activity GO:0005524|ATP binding	GO:0009574|preprophase band
pt2_00836	A	A1S	Potri.001G115000	Potri.001G115000(AS)	POPTR_0001s08210	sp|Q9SZ69|SAP7_ARATH	Zinc finger A20 and AN1 domain-containing stress-associated protein 7 OS=Arabidopsis thaliana GN=SAP7 PE=1 SV=1	AT4G12040.2	| Symbols: | A20/AN1-like zinc finger family protein | chr4:7215341-7215868 FORWARD LENGTH=175	LOC_Os07g07350.2	protein|zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed	NA	NA	GO:0006944|cellular membrane fusion GO:0008150|biological_process GO:0010200|response to chitin GO:0048193|Golgi vesicle transport	GO:0003677|DNA binding GO:0008270|zinc ion binding	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_00837	A	A1S	Potri.001G114900	Potri.001G114900(AS)	POPTR_0001s08220	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0005515|protein binding	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_00838	A	A1S	Potri.001G114800	Potri.001G114800(AS)	POPTR_0001s08230	sp|Q55720|YC49L_SYNY3	Ycf49-like protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0608 PE=3 SV=1	AT4G22830.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2499 (InterPro:IPR019634); Has 319 Blast hits to 317 proteins in 103 species: Archae - 0; Bacteria - 147; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). | chr4:11990296-11991325 REVERSE LENGTH=193	LOC_Os04g31010.2	protein|expressed protein	IMGA|Medtr5g011460.1	Ycf49-like protein chr5 3045744-3050191 F EGN_Mt100125 20111014	GO:0008150|biological_process GO:0010207|photosystem II assembly	GO:0003674|molecular_function	GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_00839	A	A1S	Potri.001G114700	Potri.001G114700(AS)	POPTR_0001s08240	NA	NA	AT4G22840.1	| Symbols: | Sodium Bile acid symporter family | chr4:11991636-11993676 REVERSE LENGTH=409	LOC_Os09g34900.1	protein|bile acid sodium symporter family protein, putative, expressed	IMGA|Medtr5g011440.1	hypothetical protein chr5 3036649-3040069 E EGN_Mt100125 20111014	GO:0006814|sodium ion transport GO:0035725|sodium ion transmembrane transport	GO:0005215|transporter activity GO:0008508|bile acid:sodium symporter activity	GO:0009941|chloroplast envelope GO:0016020|membrane
pt2_00840	A	A1S	Potri.001G114600	Potri.001G114600(AS)	POPTR_0001s08250	sp|Q55909|Y305_SYNY3	TVP38/TMEM64 family membrane protein slr0305 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr0305 PE=3 SV=1	AT4G22850.1	| Symbols: | SNARE associated Golgi protein family | chr4:11994194-11995941 FORWARD LENGTH=296	LOC_Os07g28440.1	protein|SNARE associated Golgi protein, putative, expressed	IMGA|Medtr5g011420.1	TVP38/TMEM64 family membrane protein slr0305 chr5 3031173-3029607 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005886|plasma membrane
pt2_00841	A	A1S	Potri.001G114500	Potri.001G114500(AS)	POPTR_0001s08260	sp|C0LGE4|Y1124_ARATH	Probable LRR receptor-like serine/threonine-protein kinase At1g12460 OS=Arabidopsis thaliana GN=At1g12460 PE=1 SV=1	AT1G12460.1	| Symbols: | Leucine-rich repeat protein kinase family protein | chr1:4247703-4250444 FORWARD LENGTH=882	LOC_Os03g03570.2	protein|leucine-rich repeat transmembrane protein kinase, putative, expressed	IMGA|Medtr5g011410.1	Protein kinase like protein chr5 3025593-3022609 E EGN_Mt100125 20111014	GO:0002237|response to molecule of bacterial origin GO:0006468|protein phosphorylation GO:0007165|signal transduction GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway GO:0010103|stomatal complex morphogenesis GO:0048443|stamen development	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_00842	A	A1S	Potri.001G114400	Potri.001G114400(AS)	POPTR_0001s08270	NA	NA	AT4G22860.1	| Symbols: | Cell cycle regulated microtubule associated protein | chr4:11997735-12001281 FORWARD LENGTH=509	LOC_Os06g03980.1	protein|expressed protein	NA	NA	GO:0000226|microtubule cytoskeleton organization GO:0006342|chromatin silencing GO:0006346|methylation-dependent chromatin silencing GO:0008150|biological_process GO:0009909|regulation of flower development GO:0016458|gene silencing GO:0031048|chromatin silencing by small RNA GO:0034968|histone lysine methylation GO:0042127|regulation of cell proliferation GO:0051567|histone H3-K9 methylation	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005739|mitochondrion
pt2_00843	C	C1S	Potri.001G114300	Potri.001G114300(CS)	sp|Q9LD83|SLAC1_ARATH	Guard cell S-type anion channel SLAC1 OS=Arabidopsis thaliana GN=SLAC1 PE=1 SV=1	AT1G12480.1	| Symbols: OZS1, SLAC1, RCD3, CDI3 | C4-dicarboxylate transporter/malic acid transport protein | chr1:4257427-4259249 REVERSE LENGTH=556	LOC_Os04g48530.1	protein|C4-dicarboxylate transporter/malic acid transport protein domain containing protein, expressed	NA	NA	GO:0006820|anion transport GO:0006863|purine nucleobase transport GO:0006873|cellular ion homeostasis GO:0009270|response to humidity GO:0009737|response to abscisic acid stimulus GO:0010037|response to carbon dioxide GO:0010193|response to ozone GO:0050891|multicellular organismal water homeostasis GO:0055085|transmembrane transport	GO:0005215|transporter activity GO:0008308|voltage-gated anion channel activity GO:0008509|anion transmembrane transporter activity GO:0019901|protein kinase binding	GO:0005886|plasma membrane GO:0016021|integral to membrane
pt2_00844	A	A3S	Potri.001G114200	Potri.001G114200(AS) Potri.013G030000(DS) Potri.013G030200(DS)	POPTR_0001s08290	NA	NA	AT2G32300.1	| Symbols: UCC1 | uclacyanin 1 | chr2:13722510-13723464 FORWARD LENGTH=261	NA	NA	NA	NA	GO:0048765|root hair cell differentiation GO:0048767|root hair elongation	GO:0005507|copper ion binding GO:0009055|electron carrier activity	GO:0005886|plasma membrane GO:0031225|anchored to membrane
pt2_00845	A	A2S	Potri.001G114100	Potri.001G114100(AS) Potri.003G118000(DS)	POPTR_0001s08300	sp|Q9LDH3|PT112_ARATH	Probable sugar phosphate/phosphate translocator At1g12500 OS=Arabidopsis thaliana GN=At1g12500 PE=2 SV=1	AT1G12500.1	| Symbols: | Nucleotide-sugar transporter family protein | chr1:4263542-4264957 REVERSE LENGTH=361	LOC_Os03g17740.1	protein|transporter, putative, expressed	IMGA|Medtr5g081710.2	Maturase chr5 33996127-34007844 E EGN_Mt100125 20111014	GO:0016049|cell growth GO:0030243|cellulose metabolic process	GO:0008514|organic anion transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_00846	A	A1S	Potri.001G114000	Potri.001G114000(AS)	POPTR_0001s08310	NA	NA	AT4G37740.1	| Symbols: AtGRF2, GRF2 | growth-regulating factor 2 | chr4:17725533-17727609 REVERSE LENGTH=535	LOC_Os02g45570.2	protein|growth regulating factor protein, putative, expressed	IMGA|Medtr5g027030.1	hypothetical protein chr5 10949245-10952049 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009737|response to abscisic acid stimulus GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009965|leaf morphogenesis GO:0010114|response to red light GO:0010162|seed dormancy process GO:0010218|response to far red light GO:0048366|leaf development GO:0080167|response to karrikin	GO:0005524|ATP binding GO:0016818|hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	GO:0005634|nucleus
pt2_00847	A	A1S	Potri.001G113900	Potri.001G113900(AS)	POPTR_0001s08320	sp|O23976|C76B1_HELTU	7-ethoxycoumarin O-deethylase OS=Helianthus tuberosus GN=CYP76B1 PE=1 SV=1	AT2G45550.1	| Symbols: CYP76C4 | cytochrome P450, family 76, subfamily C, polypeptide 4 | chr2:18773541-18775654 REVERSE LENGTH=511	LOC_Os03g14400.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g007460.1	Cytochrome P450 monooxygenase chr5 1131766-1133659 E EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	NA
pt2_00848	A	A2S	Potri.001G113800	Potri.001G113800(AS) Potri.003G118400(DS)	POPTR_0001s08330	sp|Q9JK72|CCS_RAT	Copper chaperone for superoxide dismutase OS=Rattus norvegicus GN=Ccs PE=1 SV=1	AT1G12520.1	| Symbols: ATCCS, CCS | copper chaperone for SOD1 | chr1:4267277-4268900 REVERSE LENGTH=320	LOC_Os04g48410.1	protein|copper chaperone for superoxide dismutase, putative, expressed	NA	NA	GO:0006801|superoxide metabolic process GO:0006878|cellular copper ion homeostasis GO:0015680|intracellular copper ion transport GO:0019430|removal of superoxide radicals GO:0030001|metal ion transport GO:0055114|oxidation-reduction process	GO:0008270|zinc ion binding GO:0016532|superoxide dismutase copper chaperone activity GO:0046872|metal ion binding	GO:0005622|intracellular GO:0005737|cytoplasm GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_00849	A	A1S	Potri.001G113700	Potri.001G113700(AS)	POPTR_0001s08340	sp|O64495|SDD1_ARATH	Subtilisin-like protease SDD1 OS=Arabidopsis thaliana GN=SDD1 PE=2 SV=1	AT1G04110.1	| Symbols: SDD1 | Subtilase family protein | chr1:1061457-1063784 REVERSE LENGTH=775	LOC_Os04g47160.1	protein|OsSub44 - Putative Subtilisin homologue, expressed	IMGA|Medtr5g011280.1	Subtilisin-like serine protease chr5 2974277-2972016 H EGN_Mt100125 20111014	GO:0006508|proteolysis GO:0008152|metabolic process GO:0010103|stomatal complex morphogenesis GO:0042127|regulation of cell proliferation GO:0043086|negative regulation of catalytic activity	GO:0004252|serine-type endopeptidase activity GO:0042802|identical protein binding	GO:0005576|extracellular region GO:0005618|cell wall GO:0009897|external side of plasma membrane
pt2_00850	A	A1S	Potri.001G113600	Potri.001G113600(AS)	POPTR_0001s08350	NA	NA	AT3G58630.1	| Symbols: | sequence-specific DNA binding transcription factors | chr3:21683928-21685771 REVERSE LENGTH=321	LOC_Os05g48690.1	protein|transcription factor like protein, putative, expressed	IMGA|contig_83346_1.1	Transcription regulation protein contig_83346 3217-606 E PREDN 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009793|embryo development ending in seed dormancy GO:0010431|seed maturation GO:0043687|post-translational protein modification GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00851	A	A1S	Potri.001G113600	Potri.001G113600(AS)	POPTR_0001s08360	NA	NA	AT3G58630.1	| Symbols: | sequence-specific DNA binding transcription factors | chr3:21683928-21685771 REVERSE LENGTH=321	LOC_Os05g48690.1	protein|transcription factor like protein, putative, expressed	IMGA|contig_83346_1.1	Transcription regulation protein contig_83346 3217-606 E PREDN 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009793|embryo development ending in seed dormancy GO:0010431|seed maturation GO:0043687|post-translational protein modification GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00852	A	A1S	Potri.001G113500	Potri.001G113500(AS)	POPTR_0001s08370	sp|Q0DA50|C3H45_ORYSJ	Zinc finger CCCH domain-containing protein 45 OS=Oryza sativa subsp. japonica GN=Os06g0677700 PE=2 SV=1	AT4G11970.2	| Symbols: | YTH family protein | chr4:7181223-7183265 FORWARD LENGTH=359	LOC_Os06g46400.1	protein|ATCPSF30/CPSF30, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00853	A	A1S	Potri.001G113400	Potri.001G113400(AS)	POPTR_0001s08380	sp|Q9STJ6|BH126_ARATH	Transcription factor bHLH126 OS=Arabidopsis thaliana GN=BHLH126 PE=2 SV=1	AT4G25410.1	| Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr4:12985772-12987149 FORWARD LENGTH=230	NA	NA	IMGA|contig_60385_1.1	BHLH transcription factor-like protein contig_60385 484-1612 E PREDN 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00854	A	A1S	Potri.001G113300	Potri.001G113300(AS)	POPTR_0001s08390	NA	NA	AT2G45630.1	| Symbols: | D-isomer specific 2-hydroxyacid dehydrogenase family protein | chr2:18796000-18796560 FORWARD LENGTH=186	LOC_Os04g01674.1	protein|erythronate-4-phosphate dehydrogenase domain containing protein, expressed	NA	NA	GO:0008152|metabolic process GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0048037|cofactor binding GO:0051287|NAD binding	GO:0005737|cytoplasm
pt2_00855	A	A1S	Potri.001G113200	Potri.001G113200(AS)	POPTR_0001s08400	sp|B6YWH0|GYAR_THEON	Glyoxylate reductase OS=Thermococcus onnurineus (strain NA1) GN=gyaR PE=3 SV=1	AT1G12550.1	| Symbols: | D-isomer specific 2-hydroxyacid dehydrogenase family protein | chr1:4274649-4275831 FORWARD LENGTH=323	LOC_Os04g01674.1	protein|erythronate-4-phosphate dehydrogenase domain containing protein, expressed	NA	NA	GO:0009853|photorespiration GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity GO:0016618|hydroxypyruvate reductase activity GO:0030267|glyoxylate reductase (NADP) activity	GO:0005737|cytoplasm
pt2_00856	A	A1S	Potri.001G113100	Potri.001G113100(AS)	POPTR_0001s08410	sp|P51091|LDOX_MALDO	Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1	AT4G22880.2	| Symbols: LDOX, TDS4, TT18, ANS | leucoanthocyanidin dioxygenase | chr4:12004905-12006059 REVERSE LENGTH=356	LOC_Os01g27490.1	protein|leucoanthocyanidin dioxygenase, putative, expressed	IMGA|Medtr5g011250.1	Leucoanthocyanidin dioxygenase chr5 2953672-2956171 E EGN_Mt100125 20111014	GO:0007033|vacuole organization GO:0009611|response to wounding GO:0009718|anthocyanin-containing compound biosynthetic process GO:0009753|response to jasmonic acid stimulus GO:0010023|proanthocyanidin biosynthetic process GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors GO:0050589|leucocyanidin oxygenase activity	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_00857	A	A1S	Potri.001G113000	Potri.001G113000(AS)	POPTR_0001s08420	sp|Q8H112|PGL1A_ARATH	PGR5-like protein 1A, chloroplastic OS=Arabidopsis thaliana GN=PGRL1A PE=1 SV=1	AT4G22890.5	| Symbols: PGR5-LIKE A | PGR5-LIKE A | chr4:12007157-12009175 FORWARD LENGTH=322	LOC_Os08g41460.2	protein|expressed protein	IMGA|Medtr5g011220.1	PGR5-like protein 1A chr5 2946108-2943524 E EGN_Mt100125 20111014	GO:0000023|maltose metabolic process GO:0006098|pentose-phosphate shunt GO:0006364|rRNA processing GO:0009637|response to blue light GO:0009657|plastid organization GO:0009773|photosynthetic electron transport in photosystem I GO:0009902|chloroplast relocation GO:0010027|thylakoid membrane organization GO:0010114|response to red light GO:0010207|photosystem II assembly GO:0010218|response to far red light GO:0010304|PSII associated light-harvesting complex II catabolic process GO:0015979|photosynthesis GO:0019252|starch biosynthetic process GO:0019684|photosynthesis, light reaction GO:0034660|ncRNA metabolic process GO:0035304|regulation of protein dephosphorylation GO:0042742|defense response to bacterium GO:0043085|positive regulation of catalytic activity	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009579|thylakoid
pt2_00858	A	A1S	Potri.001G112900	Potri.001G112900(AS)	POPTR_0001s08430	sp|Q9LN94|EXPA7_ARATH	Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 SV=1	AT1G12560.1	| Symbols: ATEXPA7, EXP7, ATEXP7, ATHEXP ALPHA 1.26, EXPA7 | expansin A7 | chr1:4276557-4277693 FORWARD LENGTH=262	LOC_Os10g39110.1	protein|expansin precursor, putative, expressed	IMGA|Medtr5g011210.1	Expansin-A7 chr5 2941626-2940011 F EGN_Mt100125 20111014	GO:0009664|plant-type cell wall organization GO:0009826|unidimensional cell growth GO:0009828|plant-type cell wall loosening GO:0009831|plant-type cell wall modification involved in multidimensional cell growth GO:0010054|trichoblast differentiation GO:0048446|petal morphogenesis GO:0048765|root hair cell differentiation GO:0048767|root hair elongation	NA	GO:0005576|extracellular region
pt2_00859	R	R	NA	NA	POPTR_0001s08440	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00860	C	C1S	Potri.001G112700	Potri.001G112700(CS)	sp|Q8L3Z8|FZR2_ARATH	Protein FIZZY-RELATED 2 OS=Arabidopsis thaliana GN=FZR2 PE=1 SV=1	AT4G22910.1	| Symbols: FZR2, CCS52A1 | FIZZY-related 2 | chr4:12012743-12015663 FORWARD LENGTH=483	LOC_Os03g03150.1	protein|WD repeat-containing protein, putative, expressed	IMGA|Medtr5g008010.1	Cell division cycle protein-like protein chr5 1393945-1396270 E EGN_Mt100125 20111014	GO:0007165|signal transduction GO:0007276|gamete generation GO:0010091|trichome branching GO:0016049|cell growth GO:0032875|regulation of DNA endoreduplication GO:0042023|DNA endoreduplication GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0043248|proteasome assembly GO:0051302|regulation of cell division GO:0051510|regulation of unidimensional cell growth GO:0051788|response to misfolded protein	GO:0004871|signal transducer activity GO:0005515|protein binding	GO:0005634|nucleus GO:0005834|heterotrimeric G-protein complex
pt2_00861	A	A1S	Potri.001G112700	Potri.001G112700(AS)	POPTR_0001s08460	sp|Q8L3Z8|FZR2_ARATH	Protein FIZZY-RELATED 2 OS=Arabidopsis thaliana GN=FZR2 PE=1 SV=1	AT4G22910.1	| Symbols: FZR2, CCS52A1 | FIZZY-related 2 | chr4:12012743-12015663 FORWARD LENGTH=483	LOC_Os03g03150.1	protein|WD repeat-containing protein, putative, expressed	IMGA|Medtr5g008010.1	Cell division cycle protein-like protein chr5 1393945-1396270 E EGN_Mt100125 20111014	GO:0007165|signal transduction GO:0007276|gamete generation GO:0010091|trichome branching GO:0016049|cell growth GO:0032875|regulation of DNA endoreduplication GO:0042023|DNA endoreduplication GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0043248|proteasome assembly GO:0051302|regulation of cell division GO:0051510|regulation of unidimensional cell growth GO:0051788|response to misfolded protein	GO:0004871|signal transducer activity GO:0005515|protein binding	GO:0005634|nucleus GO:0005834|heterotrimeric G-protein complex
pt2_00862	A	A1S	Potri.001G112600	Potri.001G112600(AS)	POPTR_0001s08470	NA	NA	AT4G22920.1	| Symbols: ATNYE1, NYE1 | non-yellowing 1 | chr4:12016776-12017969 REVERSE LENGTH=268	LOC_Os09g36200.1	protein|senescence-inducible chloroplast stay-green protein 1, putative, expressed	IMGA|Medtr5g011120.1	Senescence-inducible chloroplast stay-green protein chr5 2919163-2920896 F EGN_Mt100125 20111014	GO:0015996|chlorophyll catabolic process	GO:0005515|protein binding	NA
pt2_00863	A	A1S	Potri.001G112500	Potri.001G112500(AS)	POPTR_0001s08480	NA	NA	NA	NA	NA	NA	NA	NA	GO:0015996|chlorophyll catabolic process	GO:0005515|protein binding	NA
pt2_00864	C	C1S	Potri.001G112400	Potri.001G112400(CS)	sp|O82743|AGL19_ARATH	Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana GN=AGL19 PE=1 SV=1	AT4G22950.1	| Symbols: AGL19, GL19 | AGAMOUS-like 19 | chr4:12023946-12027421 REVERSE LENGTH=219	LOC_Os10g39130.1	protein|OsMADS56 - MADS-box family gene with MIKCc type-box, expressed	IMGA|Medtr5g031000.1	MADS-box protein chr5 12873379-12860456 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0010048|vernalization response GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0048440|carpel development GO:0048510|regulation of timing of transition from vegetative to reproductive phase	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_00865	C	C1S	Potri.001G112400	Potri.001G112400(CS)	sp|O82743|AGL19_ARATH	Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana GN=AGL19 PE=1 SV=1	AT4G22950.1	| Symbols: AGL19, GL19 | AGAMOUS-like 19 | chr4:12023946-12027421 REVERSE LENGTH=219	LOC_Os10g39130.1	protein|OsMADS56 - MADS-box family gene with MIKCc type-box, expressed	IMGA|Medtr5g031000.1	MADS-box protein chr5 12873379-12860456 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0010048|vernalization response GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0048440|carpel development GO:0048510|regulation of timing of transition from vegetative to reproductive phase	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_00866	A	A1S	Potri.001G112300	Potri.001G112300(AS)	POPTR_0001s08530	sp|Q76LS9|FA63A_MOUSE	Protein FAM63A OS=Mus musculus GN=Fam63a PE=1 SV=1	AT4G11860.1	| Symbols: | Protein of unknown function (DUF544) | chr4:7134237-7138361 REVERSE LENGTH=682	LOC_Os06g49800.1	protein|ubiquitin interaction motif family protein, expressed	IMGA|Medtr5g011090.1	Protein FAM63A chr5 2904887-2898720 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane
pt2_00867	A	A1S	Potri.001G112200	Potri.001G112200(AS)	POPTR_0001s08550	sp|P46606|HD1_BRANA	Homeobox protein HD1 OS=Brassica napus GN=HD1 PE=2 SV=1	AT1G62990.1	| Symbols: KNAT7, IXR11 | KNOTTED-like homeobox of Arabidopsis thaliana 7 | chr1:23337468-23340348 FORWARD LENGTH=291	LOC_Os03g03164.1	protein|homeobox protein knotted-1, putative, expressed	IMGA|Medtr5g011070.2	Homeobox protein knotted-1-like protein chr5 2885827-2882032 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0007155|cell adhesion GO:0010089|xylem development GO:0010090|trichome morphogenesis GO:0010413|glucuronoxylan metabolic process GO:0044036|cell wall macromolecule metabolic process GO:0045010|actin nucleation GO:0045492|xylan biosynthetic process GO:0045892|negative regulation of transcription, DNA-dependent GO:0048513|organ development GO:0048765|root hair cell differentiation GO:0071555|cell wall organization GO:2000652|regulation of secondary cell wall biogenesis	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_00868	A	A1S	Potri.001G112100	Potri.001G112100(AS)	POPTR_0001s08560	sp|P93733|PLDB1_ARATH	Phospholipase D beta 1 OS=Arabidopsis thaliana GN=PLDBETA1 PE=2 SV=4	AT2G42010.1	| Symbols: PLDBETA1, PLDBETA | phospholipase D beta 1 | chr2:17533018-17537990 REVERSE LENGTH=1083	LOC_Os10g38060.2	protein|phospholipase D, putative, expressed	IMGA|Medtr5g011050.1	Phospholipase D chr5 2872473-2867595 E EGN_Mt100125 20111014	GO:0006643|membrane lipid metabolic process GO:0006979|response to oxidative stress GO:0008152|metabolic process GO:0009793|embryo development ending in seed dormancy GO:0009816|defense response to bacterium, incompatible interaction GO:0010044|response to aluminum ion GO:0046470|phosphatidylcholine metabolic process GO:0046686|response to cadmium ion	GO:0003824|catalytic activity GO:0004630|phospholipase D activity GO:0005509|calcium ion binding GO:0005515|protein binding GO:0005546|phosphatidylinositol-4,5-bisphosphate binding	GO:0005634|nucleus GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane
pt2_00869	A	A1S	Potri.001G112000	Potri.001G112000(AS)	POPTR_0001s08570	sp|Q9SYM5|RHM1_ARATH	Probable rhamnose biosynthetic enzyme 1 OS=Arabidopsis thaliana GN=RHM1 PE=1 SV=1	AT1G63000.1	| Symbols: NRS/ER, UER1 | nucleotide-rhamnose synthase/epimerase-reductase | chr1:23342510-23343859 FORWARD LENGTH=301	LOC_Os02g45540.1	protein|synthase, putative, expressed	IMGA|contig_164943_1.1	Dtdp-glucose 4 6-dehydratase contig_164943 3364-208 F PREDN 20111014	GO:0010253|UDP-rhamnose biosynthetic process GO:0019305|dTDP-rhamnose biosynthetic process GO:0045226|extracellular polysaccharide biosynthetic process	GO:0000166|nucleotide binding GO:0008830|dTDP-4-dehydrorhamnose 3,5-epimerase activity GO:0008831|dTDP-4-dehydrorhamnose reductase activity GO:0010489|UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity GO:0010490|UDP-4-keto-rhamnose-4-keto-reductase activity	GO:0005829|cytosol GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0048046|apoplast
pt2_00870	C	C1S	Potri.001G111900	Potri.001G111900(CS)	sp|Q39547|CUCM1_CUCME	Cucumisin OS=Cucumis melo PE=1 SV=1	AT5G59090.2	| Symbols: ATSBT4.12, SBT4.12 | subtilase 4.12 | chr5:23852125-23855235 REVERSE LENGTH=731	LOC_Os06g41880.1	protein|OsSub51 - Putative Subtilisin homologue, expressed	IMGA|Medtr1g006990.1	Subtilisin-like serine protease chr1 711936-709294 H EGN_Mt100125 20111014	GO:0000041|transition metal ion transport GO:0006508|proteolysis GO:0006826|iron ion transport GO:0008152|metabolic process GO:0010106|cellular response to iron ion starvation GO:0010167|response to nitrate GO:0015706|nitrate transport GO:0016132|brassinosteroid biosynthetic process GO:0043086|negative regulation of catalytic activity	GO:0004252|serine-type endopeptidase activity GO:0042802|identical protein binding	GO:0005576|extracellular region GO:0005618|cell wall GO:0005634|nucleus GO:0005737|cytoplasm GO:0048046|apoplast
pt2_00871	A	A1S	Potri.001G111800	Potri.001G111800(AS)	POPTR_0001s08590	sp|O64647|TCP9_ARATH	Transcription factor TCP9 OS=Arabidopsis thaliana GN=TCP9 PE=2 SV=1	AT2G45680.1	| Symbols: | TCP family transcription factor | chr2:18820717-18821787 REVERSE LENGTH=356	LOC_Os08g43160.1	protein|TCP family transcription factor, putative, expressed	IMGA|Medtr1g101810.1	TCP family transcription factor chr1 30139632-30141131 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0031347|regulation of defense response	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00872	A	A1S	Potri.001G111700	Potri.001G111700(AS)	POPTR_0001s08600	sp|P54873|HMCS_ARATH	Hydroxymethylglutaryl-CoA synthase OS=Arabidopsis thaliana GN=HMGS PE=1 SV=2	AT4G11820.2	| Symbols: MVA1, FKP1 | hydroxymethylglutaryl-CoA synthase / HMG-CoA synthase / 3-hydroxy-3-methylglutaryl coenzyme A synthase | chr4:7109124-7111901 REVERSE LENGTH=461	LOC_Os08g43170.1	protein|hydroxymethylglutaryl-CoA synthase, putative, expressed	IMGA|Medtr5g011040.1	Hydroxymethylglutaryl-CoA synthase chr5 2861248-2865277 F EGN_Mt100125 20111014	GO:0006084|acetyl-CoA metabolic process GO:0008152|metabolic process GO:0008299|isoprenoid biosynthetic process GO:0019287|isopentenyl diphosphate biosynthetic process, mevalonate pathway	GO:0003824|catalytic activity GO:0004421|hydroxymethylglutaryl-CoA synthase activity	GO:0005739|mitochondrion GO:0005829|cytosol GO:0009506|plasmodesma
pt2_00873	A	A1S	Potri.001G111600	Potri.001G111600(AS)	POPTR_0001s08610	sp|Q8LGM7|MOCOS_SOLLC	Molybdenum cofactor sulfurase OS=Solanum lycopersicum GN=FLACCA PE=2 SV=1	AT5G51920.1	| Symbols: | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein | chr5:21097202-21098914 REVERSE LENGTH=570	LOC_Os08g43180.1	protein|expressed protein	IMGA|contig_52808_1.1	Molybdenum cofactor sulfurase contig_52808 4120-1183 E PREDN 20111014	GO:0008152|metabolic process	GO:0003824|catalytic activity GO:0030170|pyridoxal phosphate binding	NA
pt2_00874	A	A1S	Potri.001G111500	Potri.001G111500(AS)	POPTR_0001s08620	sp|Q9S746|HTH_ARATH	Protein HOTHEAD OS=Arabidopsis thaliana GN=HTH PE=1 SV=1	AT1G12570.1	| Symbols: | Glucose-methanol-choline (GMC) oxidoreductase family protein | chr1:4278192-4280753 REVERSE LENGTH=572	LOC_Os04g48400.1	protein|HOTHEAD precursor, putative, expressed	IMGA|Medtr5g011020.1	Choline dehydrogenase chr5 2846622-2851422 H EGN_Mt100125 20111014	GO:0006066|alcohol metabolic process GO:0055114|oxidation-reduction process	GO:0008812|choline dehydrogenase activity GO:0016614|oxidoreductase activity, acting on CH-OH group of donors GO:0016832|aldehyde-lyase activity GO:0050660|flavin adenine dinucleotide binding	GO:0005576|extracellular region
pt2_00875	B	B1S	Potri.001G111400	Potri.001G111400(BS)	POPTR_0001s08640	sp|Q93ZQ5|SPXM3_ARATH	SPX domain-containing membrane protein At4g22990 OS=Arabidopsis thaliana GN=At4g22990 PE=2 SV=2	AT4G22990.1	| Symbols: | Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein | chr4:12048240-12050984 REVERSE LENGTH=699	LOC_Os06g03860.1	protein|uncharacterized membrane protein, putative, expressed	IMGA|Medtr1g099580.1	"Membrane protein, putative" chr1 28924721-28920622 H EGN_Mt100125 20111014	GO:0055085|transmembrane transport	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005794|Golgi apparatus GO:0016021|integral to membrane
pt2_00876	B	B1S	Potri.001G111300	Potri.001G111300(BS)	POPTR_0001s08650	sp|Q9LQ02|NRPD1_ARATH	DNA-directed RNA polymerase D subunit 1 OS=Arabidopsis thaliana GN=NRPD1 PE=1 SV=1	AT1G63020.2	| Symbols: NRPD1A | nuclear RNA polymerase D1A | chr1:23355329-23361126 REVERSE LENGTH=1453	LOC_Os04g48370.1	protein|RNA polymerase IV subunit, putative, expressed	IMGA|Medtr5g011000.1	DNA-directed RNA polymerase subunit beta chr5 2818055-2831436 E EGN_Mt100125 20111014	GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0006346|methylation-dependent chromatin silencing GO:0006351|transcription, DNA-dependent GO:0006354|DNA-dependent transcription, elongation GO:0007267|cell-cell signaling GO:0009616|virus induced gene silencing GO:0010267|production of ta-siRNAs involved in RNA interference GO:0010495|long-distance posttranscriptional gene silencing GO:0016246|RNA interference GO:0016569|covalent chromatin modification GO:0030422|production of siRNA involved in RNA interference GO:0031047|gene silencing by RNA GO:0031048|chromatin silencing by small RNA GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0051567|histone H3-K9 methylation	GO:0003677|DNA binding GO:0003899|DNA-directed RNA polymerase activity GO:0005515|protein binding	GO:0000418|DNA-directed RNA polymerase IV complex GO:0005634|nucleus
pt2_00877	C	C1S	Potri.001G111200	Potri.001G111200(CS)	NA	NA	NA	NA	NA	NA	IMGA|Medtr1g056620.1	Calcium-dependent protein kinase chr1 14891325-14894046 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0046777|protein autophosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00878	A	A1S	Potri.001G111100	Potri.001G111100(AS)	POPTR_0001s08680	NA	NA	AT4G11790.1	| Symbols: | Pleckstrin homology (PH) domain superfamily protein | chr4:7090456-7093208 FORWARD LENGTH=443	LOC_Os03g46480.2	protein|ranBP1 domain containing protein, expressed	IMGA|Medtr5g010950.2	RanBP1 domain-containing protein chr5 2799196-2805406 F EGN_Mt100125 20111014	GO:0046907|intracellular transport	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00879	A	A1S	Potri.001G111000	Potri.001G111000(AS)	POPTR_0001s08690	sp|Q29Q28|UTR2_ARATH	UDP-galactose/UDP-glucose transporter 2 OS=Arabidopsis thaliana GN=UTR2 PE=2 SV=1	AT4G23010.2	| Symbols: ATUTR2, UTR2 | UDP-galactose transporter 2 | chr4:12060318-12062486 REVERSE LENGTH=362	LOC_Os03g02670.2	protein|transporter family protein, putative, expressed	NA	NA	GO:0055085|transmembrane transport GO:0072334|UDP-galactose transmembrane transport	GO:0003674|molecular_function GO:0005459|UDP-galactose transmembrane transporter activity	GO:0005886|plasma membrane GO:0030173|integral to Golgi membrane
pt2_00880	A	A1S	Potri.001G111000	Potri.001G111000(AS)	POPTR_0001s08690	sp|Q29Q28|UTR2_ARATH	UDP-galactose/UDP-glucose transporter 2 OS=Arabidopsis thaliana GN=UTR2 PE=2 SV=1	AT4G23010.2	| Symbols: ATUTR2, UTR2 | UDP-galactose transporter 2 | chr4:12060318-12062486 REVERSE LENGTH=362	LOC_Os03g02670.2	protein|transporter family protein, putative, expressed	NA	NA	GO:0055085|transmembrane transport GO:0072334|UDP-galactose transmembrane transport	GO:0003674|molecular_function GO:0005459|UDP-galactose transmembrane transporter activity	GO:0005886|plasma membrane GO:0030173|integral to Golgi membrane
pt2_00881	A	A1S	Potri.001G110900	Potri.001G110900(AS)	POPTR_0001s08700	NA	NA	AT4G23020.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11780.1). | chr4:12066331-12068442 REVERSE LENGTH=452	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_00882	A	A1S	Potri.001G110800	Potri.001G110800(AS)	POPTR_0001s08710	sp|Q9SYS6|DRE1C_ARATH	Dehydration-responsive element-binding protein 1C OS=Arabidopsis thaliana GN=DREB1C PE=2 SV=2	AT4G25470.1	| Symbols: CBF2, DREB1C, FTQ4, ATCBF2 | C-repeat/DRE binding factor 2 | chr4:13015436-13016086 REVERSE LENGTH=216	LOC_Os01g73770.1	protein|dehydration-responsive element-binding protein, putative, expressed	IMGA|Medtr1g101600.1	Dehydration-responsive element binding protein chr1 30062554-30063162 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009409|response to cold GO:0009631|cold acclimation	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00883	A	A1S	Potri.001G110700	Potri.001G110700(AS)	POPTR_0001s08720	sp|Q9FJ93|DRE1D_ARATH	Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana GN=DREB1D PE=2 SV=1	AT5G51990.1	| Symbols: CBF4, DREB1D | C-repeat-binding factor 4 | chr5:21117113-21117787 REVERSE LENGTH=224	LOC_Os04g48350.1	protein|dehydration-responsive element-binding protein, putative, expressed	IMGA|Medtr5g010930.1	Dehydration-responsive element-binding protein 1F chr5 2787016-2787696 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00884	A	A2S	Potri.001G110600	Potri.001G110600(AS) Potri.011G015200(BS)	POPTR_0001s08730	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00885	A	A2S	Potri.001G110500	Potri.001G110500(AS) Potri.003G121200(DS)	POPTR_0001s08740	sp|Q9CAN9|ERF26_ARATH	Ethylene-responsive transcription factor ERF026 OS=Arabidopsis thaliana GN=ERF026 PE=2 SV=1	AT5G52020.1	| Symbols: | Integrase-type DNA-binding superfamily protein | chr5:21124192-21124890 REVERSE LENGTH=232	LOC_Os02g45420.1	protein|AP2 domain containing protein, expressed	IMGA|Medtr1g101550.1	Ethylene-responsive transcription factor ERF026 chr1 30043510-30044157 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0045893|positive regulation of transcription, DNA-dependent GO:0050832|defense response to fungus	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00886	A	A1S	Potri.001G110400	Potri.001G110400(AS)	POPTR_0001s08750	sp|P23586|STP1_ARATH	Sugar transport protein 1 OS=Arabidopsis thaliana GN=STP1 PE=1 SV=2	AT1G11260.1	| Symbols: STP1, ATSTP1 | sugar transporter 1 | chr1:3777460-3780133 FORWARD LENGTH=522	LOC_Os07g01560.1	protein|transporter family protein, putative, expressed	IMGA|Medtr5g041550.1	Hexose transporter chr5 17820383-17818182 H EGN_Mt100125 20111014	GO:0009627|systemic acquired resistance GO:0015749|monosaccharide transport GO:0031347|regulation of defense response	GO:0005351|sugar:hydrogen symporter activity GO:0015144|carbohydrate transmembrane transporter activity GO:0015145|monosaccharide transmembrane transporter activity	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005773|vacuole GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane
pt2_00887	A	A1S	Potri.001G110300	Potri.001G110300(AS)	POPTR_0001s08760	sp|Q0WUQ1|BAG1_ARATH	BAG family molecular chaperone regulator 1 OS=Arabidopsis thaliana GN=BAG1 PE=1 SV=1	AT5G52060.1	| Symbols: ATBAG1, BAG1 | BCL-2-associated athanogene 1 | chr5:21152449-21153741 REVERSE LENGTH=342	LOC_Os09g35630.1	protein|BAG domain-containing protein, putative, expressed	IMGA|contig_48397_1.1	Protein binding protein contig_48397 106-3094 F PREDN 20111014	GO:0006833|water transport GO:0009651|response to salt stress GO:0009750|response to fructose stimulus GO:0030003|cellular cation homeostasis GO:0048767|root hair elongation GO:0070838|divalent metal ion transport	GO:0051087|chaperone binding	GO:0005739|mitochondrion
pt2_00888	A	A2S	Potri.001G110200	Potri.001G110200(AS) Potri.003G121600(DS)	POPTR_0001s08770	sp|P46280|EFTU2_SOYBN	Elongation factor Tu, chloroplastic OS=Glycine max GN=TUFB1 PE=3 SV=1	AT4G20360.1	| Symbols: ATRAB8D, ATRABE1B, RABE1b | RAB GTPase homolog E1B | chr4:10990036-10991466 FORWARD LENGTH=476	LOC_Os02g38210.1	protein|elongation factor Tu, putative, expressed	IMGA|Medtr1g013680.1	Elongation factor 1-alpha chr1 3477744-3479259 E EGN_Mt100125 20111014	GO:0000038|very long-chain fatty acid metabolic process GO:0006414|translational elongation GO:0018119|peptidyl-cysteine S-nitrosylation GO:0042335|cuticle development	GO:0003746|translation elongation factor activity GO:0003924|GTPase activity GO:0005515|protein binding GO:0005525|GTP binding	GO:0005622|intracellular GO:0005634|nucleus GO:0005730|nucleolus GO:0009295|nucleoid GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009536|plastid GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope GO:0016020|membrane GO:0048046|apoplast
pt2_00889	A	A2S	Potri.001G110100	Potri.001G110100(AS) Potri.003G121700(DS)	POPTR_0001s08780	sp|O42916|ALE1_SCHPO	Lysophospholipid acyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ale1 PE=1 SV=1	AT1G12640.1	| Symbols: | MBOAT (membrane bound O-acyl transferase) family protein | chr1:4303586-4305666 REVERSE LENGTH=462	LOC_Os02g45344.1	protein|O-acyltransferase, putative, expressed	NA	NA	GO:0006891|intra-Golgi vesicle-mediated transport GO:0006914|autophagy GO:0009610|response to symbiotic fungus GO:0010260|organ senescence GO:0016036|cellular response to phosphate starvation GO:0019375|galactolipid biosynthetic process GO:0019432|triglyceride biosynthetic process GO:0042631|cellular response to water deprivation	GO:0016746|transferase activity, transferring acyl groups GO:0071617|lysophospholipid acyltransferase activity	GO:0005576|extracellular region GO:0005783|endoplasmic reticulum GO:0005886|plasma membrane GO:0016020|membrane
pt2_00890	A	A1S	Potri.001G110000	Potri.001G110000(AS)	POPTR_0001s08790	sp|Q3UFY0|RRP36_MOUSE	Ribosomal RNA processing protein 36 homolog OS=Mus musculus GN=Rrp36 PE=2 SV=1	AT1G12650.4	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF947 (InterPro:IPR009292); Has 700 Blast hits to 631 proteins in 192 species: Archae - 0; Bacteria - 32; Metazoa - 138; Fungi - 168; Plants - 60; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink). | chr1:4306183-4307673 FORWARD LENGTH=248	LOC_Os09g35670.1	protein|expressed protein	IMGA|Medtr5g058150.1	hypothetical protein chr5 23362980-23368679 F EGN_Mt100125 20111014	GO:0000398|mRNA splicing, via spliceosome GO:0008150|biological_process GO:0051604|protein maturation	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00891	A	A1S	Potri.001G109900	Potri.001G109900(AS)	POPTR_0001s08800	NA	NA	NA	NA	NA	NA	NA	NA	GO:0009790|embryo development GO:0048467|gynoecium development GO:0048481|ovule development	NA	GO:0005634|nucleus
pt2_00892	A	A1S	Potri.001G109800	Potri.001G109800(AS)	POPTR_0001s08810	sp|Q9LN77|P2A12_ARATH	F-box protein PP2-A12 OS=Arabidopsis thaliana GN=P2A12 PE=2 SV=1	AT1G12710.1	| Symbols: AtPP2-A12, PP2-A12 | phloem protein 2-A12 | chr1:4326980-4328324 REVERSE LENGTH=291	LOC_Os03g02550.1	protein|OsFBX76 - F-box domain containing protein, expressed	IMGA|Medtr5g010800.1	F-box family protein chr5 2729633-2732548 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0030246|carbohydrate binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00893	A	A1S	Potri.001G109700	Potri.001G109700(AS)	POPTR_0001s08820	NA	NA	NA	NA	NA	NA	NA	NA	GO:0043086|negative regulation of catalytic activity GO:0080167|response to karrikin	GO:0004857|enzyme inhibitor activity GO:0030599|pectinesterase activity GO:0046910|pectinesterase inhibitor activity	GO:0005576|extracellular region
pt2_00894	A	A2S	Potri.001G109600	Potri.001G109600(AS) Potri.003G122100(BS)	POPTR_0001s08830	NA	NA	AT4G26965.1	| Symbols: | NADH:ubiquinone oxidoreductase, 17.2kDa subunit | chr4:13539717-13542041 FORWARD LENGTH=184	LOC_Os09g32430.1	protein|oxidoreductase, putative, expressed	NA	NA	NA	GO:0008137|NADH dehydrogenase (ubiquinone) activity GO:0009055|electron carrier activity GO:0016491|oxidoreductase activity	GO:0005634|nucleus GO:0005739|mitochondrion GO:0016020|membrane
pt2_00895	A	A2S	Potri.001G109500	Potri.001G109500(AS) Potri.003G122300(DS)	POPTR_0001s08840	NA	NA	AT4G11740.1	| Symbols: SAY1 | Ubiquitin-like superfamily protein | chr4:7071955-7075256 FORWARD LENGTH=564	LOC_Os09g35710.1	protein|UBX domain-containing protein, putative, expressed	NA	NA	GO:0016192|vesicle-mediated transport	NA	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol
pt2_00896	A	A1S	Potri.001G109400	Potri.001G109400(AS)	POPTR_0001s08850	sp|Q9CAN3|SCL28_ARATH	Scarecrow-like protein 28 OS=Arabidopsis thaliana GN=SCL28 PE=2 SV=1	AT1G63100.1	| Symbols: | GRAS family transcription factor | chr1:23399391-23401367 REVERSE LENGTH=658	LOC_Os06g03710.1	protein|DELLA protein SLR1, putative, expressed	IMGA|contig_52215_1.1	GAI-like protein contig_52215 101-2211 F PREDN 20111014	GO:0000226|microtubule cytoskeleton organization GO:0006355|regulation of transcription, DNA-dependent GO:0048451|petal formation GO:0048453|sepal formation	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00897	A	A1S	Potri.001G109300	Potri.001G109300(AS)	POPTR_0001s08860	sp|Q9FXW4|C80B2_COPJA	Probable (S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Coptis japonica GN=CYP80B2 PE=2 SV=1	AT1G33720.1	| Symbols: CYP76C6 | cytochrome P450, family 76, subfamily C, polypeptide 6 | chr1:12220957-12223981 REVERSE LENGTH=511	LOC_Os03g14400.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g007460.1	Cytochrome P450 monooxygenase chr5 1131766-1133659 E EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005783|endoplasmic reticulum
pt2_00898	A	A1S	Potri.001G109200	Potri.001G109200(AS)	POPTR_0001s08870	sp|Q8CHJ1|PIGU_RAT	Phosphatidylinositol glycan anchor biosynthesis class U protein OS=Rattus norvegicus GN=Pigu PE=1 SV=3	AT1G63110.1	| Symbols: | GPI transamidase subunit PIG-U | chr1:23404870-23407757 FORWARD LENGTH=469	LOC_Os02g46350.1	protein|GPI transamidase subunit PIG-U domain containing protein, expressed	NA	NA	GO:0006506|GPI anchor biosynthetic process GO:0042732|D-xylose metabolic process	NA	GO:0005739|mitochondrion GO:0005789|endoplasmic reticulum membrane GO:0005886|plasma membrane GO:0016021|integral to membrane
pt2_00899	A	A1S	Potri.001G109100	Potri.001G109100(AS)	POPTR_0001s08880	sp|Q7XU38|C87A3_ORYSJ	Cytochrome P450 87A3 OS=Oryza sativa subsp. japonica GN=CYP87A3 PE=2 SV=3	AT1G12740.1	| Symbols: CYP87A2 | cytochrome P450, family 87, subfamily A, polypeptide 2 | chr1:4342462-4344569 FORWARD LENGTH=472	LOC_Os04g48170.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g010750.1	Cytochrome P450 chr5 2706043-2703036 E EGN_Mt100125 20111014	GO:0006826|iron ion transport GO:0010106|cellular response to iron ion starvation GO:0010167|response to nitrate GO:0015706|nitrate transport GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005739|mitochondrion
pt2_00900	A	A1S	Potri.001G109000	Potri.001G109000(AS)	POPTR_0001s08890	sp|F4JP36|HAP2_ARATH	Protein HAPLESS 2 OS=Arabidopsis thaliana GN=HAP2 PE=2 SV=1	AT4G11720.1	| Symbols: HAP2, GCS1 | hapless 2 | chr4:7063291-7066784 FORWARD LENGTH=705	LOC_Os05g18730.1	protein|generative cell specific-1, putative, expressed	IMGA|Medtr5g010740.1	HAP2 chr5 2693911-2702762 H EGN_Mt100125 20111014	GO:0009567|double fertilization forming a zygote and endosperm GO:0010183|pollen tube guidance GO:0048235|pollen sperm cell differentiation	NA	GO:0005783|endoplasmic reticulum GO:0005886|plasma membrane
pt2_00901	A	A1S	Potri.001G108900	Potri.001G108900(AS)	POPTR_0001s08900	sp|Q05609|CTR1_ARATH	Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana GN=CTR1 PE=1 SV=1	AT4G23050.2	| Symbols: | PAS domain-containing protein tyrosine kinase family protein | chr4:12080112-12083708 FORWARD LENGTH=736	LOC_Os02g12810.1	protein|protein kinase domain containing protein, expressed	IMGA|Medtr5g010730.1	Tyrosine-protein kinase Lyn chr5 2690961-2684872 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006468|protein phosphorylation GO:0007165|signal transduction GO:0010155|regulation of proton transport GO:0046777|protein autophosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004712|protein serine/threonine/tyrosine kinase activity GO:0004871|signal transducer activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005829|cytosol GO:0005886|plasma membrane
pt2_00902	A	A1S	Potri.001G108800	Potri.001G108800(AS)	POPTR_0001s08910	NA	NA	AT4G23060.1	| Symbols: IQD22 | IQ-domain 22 | chr4:12087283-12090408 FORWARD LENGTH=484	LOC_Os04g48160.1	protein|IQ calmodulin-binding motif family protein, putative, expressed	NA	NA	GO:0009739|response to gibberellin stimulus	GO:0005516|calmodulin binding	GO:0005634|nucleus
pt2_00903	A	A1S	Potri.001G108700	Potri.001G108700(AS)	POPTR_0001s08920	NA	NA	AT1G63120.1	| Symbols: ATRBL2, RBL2 | RHOMBOID-like 2 | chr1:23409054-23410725 REVERSE LENGTH=317	LOC_Os11g47840.1	protein|OsRhmbd18 - Putative Rhomboid homologue, expressed	IMGA|contig_69015_1.1	Rhomboid family protein expressed contig_69015 1651-2320 H PREDN 20111014	GO:0006508|proteolysis	GO:0004252|serine-type endopeptidase activity	GO:0005794|Golgi apparatus GO:0009506|plasmodesma GO:0016021|integral to membrane
pt2_00904	A	A1S	Potri.001G108600	Potri.001G108600(AS)	POPTR_0001s08930	sp|Q6J163|5NG4_PINTA	Auxin-induced protein 5NG4 OS=Pinus taeda PE=2 SV=1	AT1G25270.1	| Symbols: | nodulin MtN21 /EamA-like transporter family protein | chr1:8857726-8859909 FORWARD LENGTH=355	LOC_Os04g34530.1	protein|integral membrane protein DUF6 containing protein, expressed	IMGA|Medtr1g114210.1	Auxin-induced protein 5NG4 chr1 33072149-33074364 H EGN_Mt100125 20111014	NA	NA	GO:0005576|extracellular region GO:0016020|membrane
pt2_00905	A	A1S	Potri.001G108500	Potri.001G108500(AS)	POPTR_0001s08940	sp|O49399|PP321_ARATH	Pentatricopeptide repeat-containing protein At4g18840 OS=Arabidopsis thaliana GN=PCMP-E101 PE=2 SV=2	AT4G18840.1	| Symbols: | Pentatricopeptide repeat (PPR-like) superfamily protein | chr4:10338719-10340356 REVERSE LENGTH=545	LOC_Os10g26070.1	protein|pentatricopeptide, putative, expressed	IMGA|Medtr5g091640.1	Pentatricopeptide repeat-containing protein chr5 38923729-38922101 E EGN_Mt100125 20111014	GO:0008150|biological_process GO:0016556|mRNA modification	NA	GO:0005575|cellular_component
pt2_00906	A	A1S	Potri.001G108400	Potri.001G108400(AS)	POPTR_0001s08950	NA	NA	AT4G11670.1	| Symbols: | Protein of unknown function (DUF810) | chr4:7044401-7052971 REVERSE LENGTH=1117	LOC_Os03g47930.1	protein|expressed protein	IMGA|Medtr1g107110.1	hypothetical protein chr1 31598271-31592980 E EGN_Mt100125 20111014	GO:0006486|protein glycosylation GO:0006888|ER to Golgi vesicle-mediated transport GO:0008150|biological_process GO:0043090|amino acid import	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00907	A	A1S	Potri.001G108400	Potri.001G108400(AS)	POPTR_0001s08950	NA	NA	AT4G11670.1	| Symbols: | Protein of unknown function (DUF810) | chr4:7044401-7052971 REVERSE LENGTH=1117	LOC_Os03g47930.1	protein|expressed protein	IMGA|Medtr1g107110.1	hypothetical protein chr1 31598271-31592980 E EGN_Mt100125 20111014	GO:0006486|protein glycosylation GO:0006888|ER to Golgi vesicle-mediated transport GO:0008150|biological_process GO:0043090|amino acid import	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00908	C	C1S	Potri.001G108400	Potri.001G108400(CS)	NA	NA	AT4G11670.1	| Symbols: | Protein of unknown function (DUF810) | chr4:7044401-7052971 REVERSE LENGTH=1117	LOC_Os03g47930.1	protein|expressed protein	IMGA|Medtr1g107110.1	hypothetical protein chr1 31598271-31592980 E EGN_Mt100125 20111014	GO:0006486|protein glycosylation GO:0006888|ER to Golgi vesicle-mediated transport GO:0008150|biological_process GO:0043090|amino acid import	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00909	A	A1S	Potri.001G108300	Potri.001G108300(AS)	POPTR_0001s08960	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process GO:0009627|systemic acquired resistance GO:0009693|ethylene biosynthetic process GO:0009697|salicylic acid biosynthetic process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_00910	A	A1S	Potri.001G108200	Potri.001G108200(AS)	POPTR_0001s08970	sp|Q9LUL8|PME26_ARATH	Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis thaliana GN=PME26 PE=2 SV=1	AT3G47670.1	| Symbols: | Plant invertase/pectin methylesterase inhibitor superfamily protein | chr3:17575019-17575849 REVERSE LENGTH=276	NA	NA	NA	NA	NA	GO:0004857|enzyme inhibitor activity GO:0030599|pectinesterase activity GO:0046910|pectinesterase inhibitor activity	GO:0005794|Golgi apparatus GO:0009507|chloroplast
pt2_00911	A	A1S	Potri.001G108100	Potri.001G108100(AS)	POPTR_0001s08990	sp|Q9T0D3|HFB2B_ARATH	Heat stress transcription factor B-2b OS=Arabidopsis thaliana GN=HSFB2B PE=2 SV=1	AT4G11660.1	| Symbols: AT-HSFB2B, HSFB2B | winged-helix DNA-binding transcription factor family protein | chr4:7043006-7044227 FORWARD LENGTH=377	LOC_Os08g43334.2	protein|HSF-type DNA-binding domain containing protein, expressed	IMGA|Medtr5g010680.1	Heat stress transcription factor B-2b chr5 2667148-2669083 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009408|response to heat GO:0009644|response to high light intensity GO:0010200|response to chitin GO:0042542|response to hydrogen peroxide GO:0045892|negative regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_00912	R	R	NA	NA	POPTR_0001s09000	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00913	G	G1	NA	NA	POPTR_0001s09010	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00914	C	C1S	Potri.001G107900	Potri.001G107900(CS)	sp|Q8W4E1|RH47_ARATH	DEAD-box ATP-dependent RNA helicase 47, mitochondrial OS=Arabidopsis thaliana GN=RH47 PE=1 SV=2	AT1G12770.1	| Symbols: ISE1, EMB1586 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:4351888-4353543 FORWARD LENGTH=551	LOC_Os03g12000.1	protein|DEAD-box ATP-dependent RNA helicase, putative, expressed	IMGA|Medtr1g085270.1	DEAD-box ATP-dependent RNA helicase chr1 22518383-22523341 E EGN_Mt100125 20111014	GO:0009663|plasmodesma organization GO:0009793|embryo development ending in seed dormancy GO:0010497|plasmodesmata-mediated intercellular transport	GO:0003676|nucleic acid binding GO:0003724|RNA helicase activity GO:0004386|helicase activity GO:0005524|ATP binding GO:0008026|ATP-dependent helicase activity	GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_00915	A	A2S	Potri.001G107600	Potri.001G107600(AS) Potri.001G102400(DS)	POPTR_0001s09030	sp|P50700|OSL3_ARATH	Osmotin-like protein OSM34 OS=Arabidopsis thaliana GN=OSM34 PE=2 SV=2	AT4G11650.1	| Symbols: ATOSM34, OSM34 | osmotin 34 | chr4:7025127-7026113 REVERSE LENGTH=244	LOC_Os03g46070.1	protein|thaumatin, putative, expressed	IMGA|Medtr5g010640.1	Pathogenesis-related thaumatin-like protein chr5 2649377-2643755 F EGN_Mt100125 20111014	GO:0009651|response to salt stress GO:0009816|defense response to bacterium, incompatible interaction GO:0009817|defense response to fungus, incompatible interaction GO:0051707|response to other organism	NA	GO:0005576|extracellular region
pt2_00916	A	A1S	Potri.001G107500	Potri.001G107500(AS)	POPTR_0001s09040	sp|Q54KJ8|T2EB_DICDI	General transcription factor IIE subunit 2 OS=Dictyostelium discoideum GN=gtf2e2 PE=3 SV=1	AT4G20330.1	| Symbols: | Transcription initiation factor TFIIE, beta subunit | chr4:10982683-10984039 REVERSE LENGTH=286	LOC_Os10g25770.2	protein|transcription initiation factor IIE subunit beta, putative, expressed	IMGA|Medtr5g010620.2	General transcription factor IIE subunit chr5 2639138-2634320 F EGN_Mt100125 20111014	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0006366|transcription from RNA polymerase II promoter GO:0006367|transcription initiation from RNA polymerase II promoter	NA	GO:0005634|nucleus GO:0005673|transcription factor TFIIE complex
pt2_00917	B	B2S	Potri.001G107400	Potri.001G107400(BS) Potri.003G124000(BS)	POPTR_0001s09050	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00918	A	A1S	Potri.001G107300	Potri.001G107300(AS)	POPTR_0001s09060	sp|Q9C8S9|RH48_ARATH	Probable DEAD-box ATP-dependent RNA helicase 48 OS=Arabidopsis thaliana GN=RH48 PE=3 SV=1	AT1G63250.1	| Symbols: | DEA(D/H)-box RNA helicase family protein | chr1:23463284-23466451 REVERSE LENGTH=798	LOC_Os02g57980.1	protein|DEAD/DEAH box helicase, putative, expressed	IMGA|contig_83207_1.1	ATP-dependent RNA helicase contig_83207 17-1570 H PREDN 20111014	NA	GO:0003676|nucleic acid binding GO:0004386|helicase activity GO:0005524|ATP binding GO:0008026|ATP-dependent helicase activity	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_00919	A	A1S	Potri.001G107200	Potri.001G107200(AS)	POPTR_0001s09070	NA	NA	AT1G63260.2	| Symbols: TET10 | tetraspanin10 | chr1:23466975-23468945 REVERSE LENGTH=258	LOC_Os10g35980.1	protein|tetraspanin family protein, putative, expressed	IMGA|Medtr5g030070.1	hypothetical protein chr5 12391997-12393827 F EGN_Mt100125 20111014	GO:0007568|aging	NA	GO:0005576|extracellular region GO:0005739|mitochondrion GO:0016021|integral to membrane
pt2_00920	A	A1S	Potri.001G107100	Potri.001G107100(AS)	POPTR_0001s09080	sp|P29675|SF3_HELAN	Pollen-specific protein SF3 OS=Helianthus annuus GN=SF3 PE=2 SV=1	AT3G61230.1	| Symbols: | GATA type zinc finger transcription factor family protein | chr3:22664601-22665503 REVERSE LENGTH=213	LOC_Os02g42820.1	protein|OsPLIM2a - LIM domain protein, putative actin-binding protein and transcription factor, expressed	IMGA|Medtr1g017950.1	Transcription factor lim1 chr1 5236878-5235441 F EGN_Mt100125 20111014	GO:0006944|cellular membrane fusion GO:0051017|actin filament bundle assembly	GO:0008270|zinc ion binding GO:0051015|actin filament binding	GO:0005737|cytoplasm GO:0015629|actin cytoskeleton
pt2_00921	A	A1S	Potri.001G107000	Potri.001G107000(AS)	POPTR_0001s09090	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003677|DNA binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00922	A	A1S	Potri.001G106900	Potri.001G106900(AS)	POPTR_0001s09100	sp|Q9ZVL3|NFYC3_ARATH	Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana GN=NFYC3 PE=2 SV=1	AT1G54830.3	| Symbols: NF-YC3 | nuclear factor Y, subunit C3 | chr1:20451672-20452325 FORWARD LENGTH=217	LOC_Os04g58680.1	protein|core histone H2A/H2B/H3/H4, putative, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_00923	A	A1S	Potri.001G106800	Potri.001G106800(AS)	POPTR_0001s09110	sp|Q9SV07|ASAT1_ARATH	Acyl-CoA--sterol O-acyltransferase 1 OS=Arabidopsis thaliana GN=ASAT1 PE=1 SV=1	AT3G51970.1	| Symbols: ATSAT1, ASAT1, ATASAT1 | acyl-CoA sterol acyl transferase 1 | chr3:19284420-19285457 FORWARD LENGTH=345	LOC_Os02g25700.1	protein|O-acyltransferase, putative, expressed	IMGA|Medtr5g094140.1	hypothetical protein chr5 40078555-40077150 H EGN_Mt100125 20111014	GO:0008150|biological_process GO:0016127|sterol catabolic process GO:0034434|sterol esterification	GO:0005515|protein binding GO:0016746|transferase activity, transferring acyl groups	GO:0009507|chloroplast
pt2_00924	A	A1S	Potri.001G106700	Potri.001G106700(AS)	POPTR_0001s09120	NA	NA	AT1G63300.1	| Symbols: | Myosin heavy chain-related protein | chr1:23482193-23486067 FORWARD LENGTH=1029	LOC_Os10g36060.1	protein|protein transport protein-related, putative, expressed	IMGA|Medtr5g010520.1	hypothetical protein chr5 2590332-2585570 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_00925	A	A1S	Potri.001G106600	Potri.001G106600(AS)	POPTR_0001s09130	sp|C0LGH8|Y1634_ARATH	Probable LRR receptor-like serine/threonine-protein kinase At1g63430 OS=Arabidopsis thaliana GN=At1g63430 PE=1 SV=1	AT1G63430.1	| Symbols: | Leucine-rich repeat protein kinase family protein | chr1:23522896-23526451 FORWARD LENGTH=664	LOC_Os04g58700.1	protein|expressed protein	IMGA|Medtr5g010440.2	hypothetical protein chr5 2558199-2554744 F EGN_Mt100125 20111014	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0006468|protein phosphorylation GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway GO:0009086|methionine biosynthetic process	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_00926	G	G1	NA	NA	POPTR_0001s09140	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00927	A	A1S	Potri.001G106400	Potri.001G106400(AS)	POPTR_0001s09150	sp|Q9SH27|LOR4_ARATH	Protein LURP-one-related 4 OS=Arabidopsis thaliana GN=At1g63410 PE=3 SV=1	AT1G63410.1	| Symbols: | Protein of unknown function (DUF567) | chr1:23510075-23511997 REVERSE LENGTH=208	LOC_Os07g47540.1	protein|DUF567 domain containing protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00928	B	B1S	Potri.001G106300	Potri.001G106300(BS)	POPTR_0001s09160	sp|Q9SH27|LOR4_ARATH	Protein LURP-one-related 4 OS=Arabidopsis thaliana GN=At1g63410 PE=3 SV=1	AT1G63410.1	| Symbols: | Protein of unknown function (DUF567) | chr1:23510075-23511997 REVERSE LENGTH=208	LOC_Os07g47540.1	protein|DUF567 domain containing protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00929	A	A1S	Potri.001G106200	Potri.001G106200(AS)	POPTR_0001s09170	sp|P30175|ADF_LILLO	Actin-depolymerizing factor OS=Lilium longiflorum PE=2 SV=1	AT4G00680.1	| Symbols: ADF8 | actin depolymerizing factor 8 | chr4:279780-280608 REVERSE LENGTH=140	LOC_Os02g44470.1	protein|actin-depolymerizing factor, putative, expressed	IMGA|Medtr5g010430.1	Actin depolymerizing factor chr5 2553660-2554177 H EGN_Mt100125 20111014	GO:0008150|biological_process GO:0010054|trichoblast differentiation	GO:0003779|actin binding	GO:0005622|intracellular GO:0005737|cytoplasm
pt2_00930	A	A2S	Potri.001G106100	Potri.001G106100(AS) Potri.003G125400(DS)	POPTR_0001s09180	sp|P29516|TBB8_ARATH	Tubulin beta-8 chain OS=Arabidopsis thaliana GN=TUBB8 PE=2 SV=2	AT5G23860.2	| Symbols: TUB8 | tubulin beta 8 | chr5:8042962-8044528 FORWARD LENGTH=449	LOC_Os03g01530.1	protein|tubulin/FtsZ domain containing protein, putative, expressed	IMGA|contig_53526_2.1	Tubulin beta chain contig_53526 5156-2874 H PREDN 20111014	GO:0006094|gluconeogenesis GO:0006184|GTP catabolic process GO:0007010|cytoskeleton organization GO:0009409|response to cold GO:0009651|response to salt stress GO:0010498|proteasomal protein catabolic process GO:0010583|response to cyclopentenone GO:0051258|protein polymerization	GO:0003924|GTPase activity GO:0005198|structural molecule activity GO:0005200|structural constituent of cytoskeleton GO:0005515|protein binding GO:0005525|GTP binding	GO:0005737|cytoplasm GO:0005794|Golgi apparatus GO:0005874|microtubule GO:0016020|membrane GO:0043234|protein complex GO:0045298|tubulin complex
pt2_00931	A	A1S	Potri.001G106000	Potri.001G106000(AS)	POPTR_0001s09190	sp|Q54HH2|SRR_DICDI	Probable serine racemase OS=Dictyostelium discoideum GN=srr PE=3 SV=1	AT4G11640.1	| Symbols: ATSR, SR | serine racemase | chr4:7021770-7023252 FORWARD LENGTH=331	LOC_Os04g46930.2	protein|serine racemase, putative, expressed	IMGA|contig_48629_2.1	Carbamoyltransferase contig_48629 2809-11844 I PREDN 20111014	GO:0006563|L-serine metabolic process GO:0009069|serine family amino acid metabolic process GO:0070178|D-serine metabolic process	GO:0003941|L-serine ammonia-lyase activity GO:0008721|D-serine ammonia-lyase activity GO:0030378|serine racemase activity	NA
pt2_00932	A	A1S	Potri.001G106000	Potri.001G106000(AS)	POPTR_0001s09190	sp|Q54HH2|SRR_DICDI	Probable serine racemase OS=Dictyostelium discoideum GN=srr PE=3 SV=1	AT4G11640.1	| Symbols: ATSR, SR | serine racemase | chr4:7021770-7023252 FORWARD LENGTH=331	LOC_Os04g46930.2	protein|serine racemase, putative, expressed	IMGA|contig_48629_2.1	Carbamoyltransferase contig_48629 2809-11844 I PREDN 20111014	GO:0006563|L-serine metabolic process GO:0009069|serine family amino acid metabolic process GO:0070178|D-serine metabolic process	GO:0003941|L-serine ammonia-lyase activity GO:0008721|D-serine ammonia-lyase activity GO:0030378|serine racemase activity	NA
pt2_00933	A	A1S	Potri.001G105900	Potri.001G105900(AS)	POPTR_0001s09200	sp|Q9SMT7|4CLLA_ARATH	4-coumarate--CoA ligase-like 10 OS=Arabidopsis thaliana GN=4CLL10 PE=2 SV=1	AT3G48990.1	| Symbols: | AMP-dependent synthetase and ligase family protein | chr3:18159031-18161294 REVERSE LENGTH=514	LOC_Os04g58710.1	protein|AMP-binding domain containing protein, expressed	IMGA|Medtr5g027480.1	4-coumarate-CoA ligase chr5 11195434-11192919 H EGN_Mt100125 20111014	GO:0010030|positive regulation of seed germination GO:0010167|response to nitrate GO:0010214|seed coat development GO:0015706|nitrate transport GO:0033611|oxalate catabolic process GO:0046482|para-aminobenzoic acid metabolic process GO:0046686|response to cadmium ion GO:0050832|defense response to fungus	GO:0016208|AMP binding GO:0050203|oxalate-CoA ligase activity	GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0009506|plasmodesma GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0048046|apoplast
pt2_00934	A	A1S	Potri.001G105800	Potri.001G105800(AS)	POPTR_0001s09210	sp|Q9SH30|HMA5_ARATH	Putative copper-transporting ATPase HMA5 OS=Arabidopsis thaliana GN=HMA5 PE=2 SV=2	AT1G63440.1	| Symbols: HMA5 | heavy metal atpase 5 | chr1:23527655-23531109 FORWARD LENGTH=995	LOC_Os04g46940.1	protein|copper-transporting ATPase 3, putative, expressed	IMGA|Medtr5g010420.1	Heavy metal P-type ATPase chr5 2546605-2543385 H EGN_Mt100125 20111014	GO:0006754|ATP biosynthetic process GO:0006812|cation transport GO:0008152|metabolic process GO:0010043|response to zinc ion GO:0010273|detoxification of copper ion GO:0030001|metal ion transport GO:0046034|ATP metabolic process GO:0046688|response to copper ion	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0005524|ATP binding GO:0015662|ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism GO:0043682|copper-transporting ATPase activity GO:0046872|metal ion binding	GO:0005886|plasma membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_00935	A	A1S	Potri.001G105700	Potri.001G105700(AS)	POPTR_0001s09220	sp|Q9SH30|HMA5_ARATH	Putative copper-transporting ATPase HMA5 OS=Arabidopsis thaliana GN=HMA5 PE=2 SV=2	AT1G63440.1	| Symbols: HMA5 | heavy metal atpase 5 | chr1:23527655-23531109 FORWARD LENGTH=995	LOC_Os04g46940.1	protein|copper-transporting ATPase 3, putative, expressed	IMGA|Medtr5g010420.1	Heavy metal P-type ATPase chr5 2546605-2543385 H EGN_Mt100125 20111014	GO:0006754|ATP biosynthetic process GO:0006812|cation transport GO:0008152|metabolic process GO:0010043|response to zinc ion GO:0010273|detoxification of copper ion GO:0030001|metal ion transport GO:0046034|ATP metabolic process GO:0046688|response to copper ion	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0005524|ATP binding GO:0015662|ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism GO:0043682|copper-transporting ATPase activity GO:0046872|metal ion binding	GO:0005886|plasma membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_00936	A	A1S	Potri.001G105600	Potri.001G105600(AS)	POPTR_0001s09230	sp|Q9ZRT5|GSTT1_ARATH	Glutathione S-transferase T1 OS=Arabidopsis thaliana GN=GSTT1 PE=2 SV=1	AT5G41210.1	| Symbols: ATGSTT1, GST10, GSTT1 | glutathione S-transferase THETA 1 | chr5:16492550-16493884 REVERSE LENGTH=245	LOC_Os11g37730.1	protein|glutathione S-transferase, N-terminal domain containing protein, expressed	NA	NA	GO:0009407|toxin catabolic process GO:0010583|response to cyclopentenone	GO:0004364|glutathione transferase activity	GO:0005737|cytoplasm
pt2_00937	C	C1S	Potri.001G105500	Potri.001G105500(CS)	sp|Q8L727|GSTT2_ARATH	Glutathione S-transferase T2 OS=Arabidopsis thaliana GN=GSTT2 PE=2 SV=1	AT5G41240.1	| Symbols: ATGSTT2, GST10B, GSTT2 | glutathione S-transferase THETA 2 | chr5:16498293-16500811 REVERSE LENGTH=591	LOC_Os11g37730.2	protein|glutathione S-transferase, N-terminal domain containing protein, expressed	NA	NA	GO:0009407|toxin catabolic process	GO:0004364|glutathione transferase activity	GO:0005737|cytoplasm
pt2_00938	A	A1S	Potri.001G105400	Potri.001G105400(AS)	POPTR_0001s09250	NA	NA	AT4G11610.1	| Symbols: | C2 calcium/lipid-binding plant phosphoribosyltransferase family protein | chr4:7013956-7017846 REVERSE LENGTH=1011	LOC_Os04g58720.1	protein|anthranilate phosphoribosyltransferase, putative, expressed	IMGA|Medtr5g010390.1	Glutathione peroxidase chr5 2530505-2527317 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_00939	A	A1S	Potri.001G105300	Potri.001G105300(AS)	POPTR_0001s09260	sp|Q8H038|KATAM_ORYSJ	Xyloglucan galactosyltransferase KATAMARI1 homolog OS=Oryza sativa subsp. japonica GN=Os03g0144800 PE=2 SV=1	AT1G63450.1	| Symbols: RHS8 | root hair specific 8 | chr1:23532523-23534517 FORWARD LENGTH=664	LOC_Os03g05110.1	protein|xyloglucan galactosyltransferase KATAMARI1, putative, expressed	IMGA|Medtr5g010370.1	Xyloglucan galactosyltransferase KATAMARI1 chr5 2522459-2520816 H EGN_Mt100125 20111014	NA	GO:0003824|catalytic activity	GO:0005794|Golgi apparatus GO:0016020|membrane
pt2_00940	A	A1S	Potri.001G105200	Potri.001G105200(AS)	POPTR_0001s09270	sp|O23814|GPX4_SPIOL	Probable phospholipid hydroperoxide glutathione peroxidase OS=Spinacia oleracea PE=2 SV=1	AT4G11600.1	| Symbols: ATGPX6, PHGPX, LSC803, GPX6 | glutathione peroxidase 6 | chr4:7010021-7011330 REVERSE LENGTH=232	LOC_Os04g46960.2	protein|glutathione peroxidase domain containing protein, expressed	IMGA|Medtr5g010340.1	Glutathione peroxidase chr5 2515823-2513474 H EGN_Mt100125 20111014	GO:0006333|chromatin assembly or disassembly GO:0006979|response to oxidative stress GO:0007623|circadian rhythm GO:0009407|toxin catabolic process GO:0009651|response to salt stress GO:0046686|response to cadmium ion GO:0055114|oxidation-reduction process	GO:0004602|glutathione peroxidase activity	GO:0005739|mitochondrion GO:0005829|cytosol GO:0005886|plasma membrane GO:0009507|chloroplast GO:0048046|apoplast
pt2_00941	A	A1S	Potri.001G105100	Potri.001G105100(AS)	POPTR_0001s09280	sp|Q8LBU2|GPX8_ARATH	Probable glutathione peroxidase 8 OS=Arabidopsis thaliana GN=GPX8 PE=2 SV=1	AT1G63460.1	| Symbols: GPX8, ATGPX8 | glutathione peroxidase 8 | chr1:23535118-23536326 FORWARD LENGTH=167	LOC_Os02g44500.1	protein|glutathione peroxidase, putative, expressed	IMGA|Medtr5g010340.1	Glutathione peroxidase chr5 2515823-2513474 H EGN_Mt100125 20111014	GO:0006979|response to oxidative stress GO:0009407|toxin catabolic process	GO:0004601|peroxidase activity GO:0004602|glutathione peroxidase activity	GO:0005634|nucleus GO:0005829|cytosol
pt2_00942	A	A2S	Potri.001G105000	Potri.001G105000(AS) Potri.001G105100(AA)	POPTR_0001s09290	NA	NA	NA	NA	NA	NA	IMGA|contig_104326_1.1	Ripening-related protein contig_104326 1319-741 H PREDN 20111014	NA	NA	NA
pt2_00943	A	A1S	Potri.001G104900	Potri.001G104900(AS)	POPTR_0001s09300	sp|Q9S7C9|ESCA_ARATH	Putative DNA-binding protein ESCAROLA OS=Arabidopsis thaliana GN=ESC PE=2 SV=1	AT1G63470.1	| Symbols: | AT hook motif DNA-binding family protein | chr1:23536831-23538863 REVERSE LENGTH=378	LOC_Os02g57820.1	protein|AT hook motif domain containing protein, expressed	IMGA|Medtr5g010330.1	DNA-binding PD1-like protein chr5 2508875-2512497 E EGN_Mt100125 20111014	GO:0000226|microtubule cytoskeleton organization GO:0000280|nuclear division GO:0006260|DNA replication GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0006346|methylation-dependent chromatin silencing GO:0007000|nucleolus organization GO:0007267|cell-cell signaling GO:0008150|biological_process GO:0008283|cell proliferation GO:0009616|virus induced gene silencing GO:0009909|regulation of flower development GO:0010267|production of ta-siRNAs involved in RNA interference GO:0016246|RNA interference GO:0016458|gene silencing GO:0016570|histone modification GO:0016571|histone methylation GO:0016572|histone phosphorylation GO:0031047|gene silencing by RNA GO:0031048|chromatin silencing by small RNA GO:0034968|histone lysine methylation GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0048449|floral organ formation GO:0051225|spindle assembly GO:0051567|histone H3-K9 methylation	GO:0003677|DNA binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00944	A	A1S	Potri.001G104800	Potri.001G104800(AS)	POPTR_0001s09310	sp|A4XKC6|RUVX_CALS8	Putative Holliday junction resolvase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=Csac_1776 PE=3 SV=1	AT3G52905.1	| Symbols: | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr3:19614142-19615471 REVERSE LENGTH=170	LOC_Os01g55900.1	protein|holliday junction resolvase, putative, expressed	IMGA|Medtr5g010310.1	Hypothetical protein chr5 2497928-2501809 E EGN_Mt100125 20111014	GO:0006139|nucleobase-containing compound metabolic process GO:0006281|DNA repair GO:0006310|DNA recombination GO:0006974|response to DNA damage stimulus	GO:0003676|nucleic acid binding GO:0016788|hydrolase activity, acting on ester bonds	GO:0005737|cytoplasm
pt2_00945	A	A1S	Potri.001G104700	Potri.001G104700(AS)	POPTR_0001s09320	sp|Q9FHD7|Y5126_ARATH	Probable serine/threonine-protein kinase At5g41260 OS=Arabidopsis thaliana GN=At5g41260 PE=1 SV=1	AT1G63500.1	| Symbols: | Protein kinase protein with tetratricopeptide repeat domain | chr1:23556015-23558403 FORWARD LENGTH=487	LOC_Os10g42110.1	protein|protein kinase family protein, putative, expressed	IMGA|Medtr5g098970.1	Receptor like protein kinase chr5 42299884-42292251 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_00946	B	B1S	Potri.001G104600	Potri.001G104600(BS)	POPTR_0001s09330	sp|Q9ZPN9|TBB2_ELEIN	Tubulin beta-2 chain OS=Eleusine indica GN=TUBB2 PE=2 SV=1	AT5G12250.1	| Symbols: TUB6 | beta-6 tubulin | chr5:3961317-3962971 REVERSE LENGTH=449	LOC_Os01g59150.2	protein|tubulin/FtsZ domain containing protein, putative, expressed	IMGA|contig_53526_2.1	Tubulin beta chain contig_53526 5156-2874 H PREDN 20111014	GO:0000271|polysaccharide biosynthetic process GO:0006084|acetyl-CoA metabolic process GO:0006094|gluconeogenesis GO:0006096|glycolysis GO:0006184|GTP catabolic process GO:0006833|water transport GO:0006972|hyperosmotic response GO:0007010|cytoskeleton organization GO:0007030|Golgi organization GO:0009266|response to temperature stimulus GO:0009409|response to cold GO:0009651|response to salt stress GO:0009740|gibberellic acid mediated signaling pathway GO:0009825|multidimensional cell growth GO:0009932|cell tip growth GO:0010162|seed dormancy process GO:0010498|proteasomal protein catabolic process GO:0010817|regulation of hormone levels GO:0016126|sterol biosynthetic process GO:0016132|brassinosteroid biosynthetic process GO:0019344|cysteine biosynthetic process GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0046686|response to cadmium ion GO:0048767|root hair elongation GO:0051258|protein polymerization GO:0071555|cell wall organization	GO:0003924|GTPase activity GO:0005198|structural molecule activity GO:0005200|structural constituent of cytoskeleton GO:0005525|GTP binding	GO:0005737|cytoplasm GO:0005874|microtubule GO:0005886|plasma membrane GO:0015630|microtubule cytoskeleton GO:0043234|protein complex
pt2_00947	A	A1S	Potri.001G104500	Potri.001G104500(AS)	POPTR_0001s09340	sp|O22493|GSH1_SOLLC	Glutamate--cysteine ligase, chloroplastic OS=Solanum lycopersicum GN=GSH1 PE=2 SV=1	AT4G23100.3	| Symbols: GSH1 | glutamate-cysteine ligase | chr4:12103458-12106751 REVERSE LENGTH=522	LOC_Os05g03820.1	protein|glutamate--cysteine ligase, chloroplast precursor, putative, expressed	IMGA|Medtr5g010250.1	Glutamate-cysteine ligase chr5 2453836-2457263 F EGN_Mt100125 20111014	GO:0002213|defense response to insect GO:0006007|glucose catabolic process GO:0006094|gluconeogenesis GO:0006096|glycolysis GO:0006750|glutathione biosynthetic process GO:0009408|response to heat GO:0009651|response to salt stress GO:0009700|indole phytoalexin biosynthetic process GO:0009753|response to jasmonic acid stimulus GO:0009816|defense response to bacterium, incompatible interaction GO:0009908|flower development GO:0010193|response to ozone GO:0019344|cysteine biosynthetic process GO:0019761|glucosinolate biosynthetic process GO:0030244|cellulose biosynthetic process GO:0042742|defense response to bacterium GO:0046686|response to cadmium ion GO:0050832|defense response to fungus GO:0052544|defense response by callose deposition in cell wall	GO:0004357|glutamate-cysteine ligase activity	GO:0009507|chloroplast GO:0009536|plastid GO:0009570|chloroplast stroma
pt2_00948	A	A2S	Potri.T159100	Potri.T159100(AS) Potri.001G104400(AS)	POPTR_0001s09350	sp|Q9X0Y1|P1254_THEMA	Phosphorylated carbohydrates phosphatase TM_1254 OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=TM_1254 PE=1 SV=1	AT4G11570.2	| Symbols: | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr4:7004743-7005864 FORWARD LENGTH=373	LOC_Os09g39560.1	protein|genetic modifier, putative, expressed	NA	NA	GO:0008152|metabolic process GO:0015996|chlorophyll catabolic process	GO:0003824|catalytic activity GO:0016787|hydrolase activity	GO:0005634|nucleus
pt2_00949	A	A1S	Potri.T159200	Potri.T159200(AS)	POPTR_0001s09360	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00950	A	A1S	Potri.T159200	Potri.T159200(AS)	POPTR_0001s09370	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00951	A	A1S	Potri.001G104300	Potri.001G104300(AS)	POPTR_0001s09380	NA	NA	AT4G11560.1	| Symbols: | bromo-adjacent homology (BAH) domain-containing protein | chr4:7000095-7003445 REVERSE LENGTH=587	LOC_Os01g34330.1	protein|BAH domain containing protein, expressed	IMGA|Medtr5g010190.1	BAH and coiled-coil domain-containing protein chr5 2430335-2425135 F EGN_Mt100125 20111014	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0006351|transcription, DNA-dependent GO:0009630|gravitropism	GO:0003677|DNA binding	GO:0005634|nucleus
pt2_00952	A	A1S	Potri.001G104200	Potri.001G104200(AS)	POPTR_0001s09390	NA	NA	AT4G11450.1	| Symbols: | Protein of unknown function (DUF3527) | chr4:6959065-6961223 REVERSE LENGTH=694	LOC_Os10g40324.1	protein|expressed protein	NA	NA	GO:0008150|biological_process GO:0010089|xylem development GO:0044036|cell wall macromolecule metabolic process	NA	GO:0005634|nucleus
pt2_00953	A	A1S	Potri.001G104100	Potri.001G104100(AS)	POPTR_0001s09400	NA	NA	NA	NA	NA	NA	NA	NA	GO:0009616|virus induced gene silencing GO:0010025|wax biosynthetic process GO:0010050|vegetative phase change GO:0010267|production of ta-siRNAs involved in RNA interference GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0051607|defense response to virus	NA	GO:0005737|cytoplasm GO:0005783|endoplasmic reticulum GO:0005829|cytosol
pt2_00954	A	A1S	Potri.001G104000	Potri.001G104000(AS)	POPTR_0001s09410	sp|O81635|ATK4_ARATH	Kinesin-4 OS=Arabidopsis thaliana GN=ATK4 PE=1 SV=2	AT1G63640.1	| Symbols: | P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain | chr1:23589234-23595139 REVERSE LENGTH=1071	LOC_Os01g54080.1	protein|kinesin motor protein-related, putative, expressed	IMGA|Medtr5g096570.1	Kinesin-4 chr5 41201995-41191073 E EGN_Mt100125 20111014	GO:0000226|microtubule cytoskeleton organization GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0006346|methylation-dependent chromatin silencing GO:0007267|cell-cell signaling GO:0009616|virus induced gene silencing GO:0009909|regulation of flower development GO:0010267|production of ta-siRNAs involved in RNA interference GO:0016458|gene silencing GO:0016570|histone modification GO:0016572|histone phosphorylation GO:0031047|gene silencing by RNA GO:0031048|chromatin silencing by small RNA GO:0034968|histone lysine methylation GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0048449|floral organ formation GO:0051567|histone H3-K9 methylation	GO:0003777|microtubule motor activity GO:0005524|ATP binding	GO:0005886|plasma membrane
pt2_00955	A	A1S	Potri.001G103900	Potri.001G103900(AS)	POPTR_0001s09420	sp|Q9P0P0|RN181_HUMAN	E3 ubiquitin-protein ligase RNF181 OS=Homo sapiens GN=RNF181 PE=1 SV=1	AT4G26400.1	| Symbols: | RING/U-box superfamily protein | chr4:13344953-13346023 REVERSE LENGTH=356	LOC_Os03g22830.2	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr5g041330.1	RING finger protein chr5 17745449-17746282 H EGN_Mt100125 20111014	GO:0000303|response to superoxide GO:0009651|response to salt stress GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009743|response to carbohydrate stimulus GO:0009873|ethylene mediated signaling pathway GO:0010200|response to chitin	GO:0008270|zinc ion binding	NA
pt2_00956	A	A1S	Potri.001G103800	Potri.001G103800(AS)	POPTR_0001s09430	NA	NA	AT4G23330.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2365 (InterPro:IPR019314). | chr4:12192136-12193383 FORWARD LENGTH=147	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus GO:0005737|cytoplasm
pt2_00957	A	A1S	Potri.001G103700	Potri.001G103700(AS)	POPTR_0001s09440	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00958	A	A1S	Potri.001G103600	Potri.001G103600(AS)	POPTR_0001s09450	sp|Q9FN69|GL3_ARATH	Transcription factor GLABRA 3 OS=Arabidopsis thaliana GN=GL3 PE=1 SV=1	AT5G41315.1	| Symbols: GL3, MYC6.2 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr5:16529457-16532866 FORWARD LENGTH=637	LOC_Os04g47080.1	protein|anthocyanin regulatory Lc protein, putative, expressed	IMGA|Medtr1g072320.1	Transcription factor TT8 chr1 18090629-18083194 H EGN_Mt100125 20111014	GO:0001708|cell fate specification GO:0009957|epidermal cell fate specification GO:0010091|trichome branching	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_00959	A	A1S	Potri.001G103500	Potri.001G103500(AS)	POPTR_0001s09460	sp|Q42556|PMA9_ARATH	ATPase 9, plasma membrane-type OS=Arabidopsis thaliana GN=AHA9 PE=2 SV=2	AT1G80660.2	| Symbols: HA9 | H(+)-ATPase 9 | chr1:30316227-30319948 REVERSE LENGTH=945	LOC_Os04g56160.2	protein|plasma membrane ATPase, putative, expressed	IMGA|contig_93597_1.1	H-ATPase contig_93597 548-3166 H PREDN 20111014	GO:0006200|ATP catabolic process GO:0006754|ATP biosynthetic process GO:0006812|cation transport GO:0008152|metabolic process GO:0015992|proton transport	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0005524|ATP binding GO:0008553|hydrogen-exporting ATPase activity, phosphorylative mechanism GO:0015662|ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism GO:0016887|ATPase activity GO:0046872|metal ion binding	GO:0005774|vacuolar membrane GO:0005886|plasma membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_00960	A	A1S	Potri.001G103400	Potri.001G103400(AS)	POPTR_0001s09470	NA	NA	AT2G45900.1	| Symbols: | Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related | chr2:18886069-18888674 REVERSE LENGTH=720	LOC_Os03g01580.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00961	A	A1S	Potri.001G103300	Potri.001G103300(AS)	POPTR_0001s09480	sp|Q65JY4|MURE_BACLD	 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=murE PE=3 SV=1	AT1G63680.1	| Symbols: ATMURE, PDE316, MURE | acid-amino acid ligases;ligases;ATP binding;ATP binding;ligases | chr1:23614461-23617247 FORWARD LENGTH=772	LOC_Os10g40130.1	protein|Mur ligase family protein, putative, expressed	NA	NA	GO:0006364|rRNA processing GO:0006399|tRNA metabolic process GO:0008360|regulation of cell shape GO:0009058|biosynthetic process GO:0009658|chloroplast organization GO:0009902|chloroplast relocation GO:0010020|chloroplast fission GO:0010027|thylakoid membrane organization GO:0034660|ncRNA metabolic process GO:0042793|transcription from plastid promoter GO:0045893|positive regulation of transcription, DNA-dependent	GO:0005524|ATP binding GO:0016874|ligase activity GO:0016881|acid-amino acid ligase activity	GO:0005737|cytoplasm GO:0009295|nucleoid GO:0009507|chloroplast
pt2_00962	A	A1S	Potri.001G103200	Potri.001G103200(AS)	POPTR_0001s09490	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00963	A	A1S	Potri.001G103100	Potri.001G103100(AS)	POPTR_0001s09500	sp|Q5F383|SPP2B_CHICK	Signal peptide peptidase-like 2B OS=Gallus gallus GN=SPPL2B PE=2 SV=1	AT1G63690.1	| Symbols: ATSPPL2, SPPL2 | SIGNAL PEPTIDE PEPTIDASE-LIKE 2 | chr1:23618490-23622082 FORWARD LENGTH=540	LOC_Os06g51430.1	protein|signal peptide peptidase-like 2B, putative, expressed	IMGA|Medtr1g116800.1	hypothetical protein chr1 34048331-34047060 H EGN_Mt100125 20111014	GO:0006508|proteolysis	GO:0004190|aspartic-type endopeptidase activity GO:0008233|peptidase activity	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005886|plasma membrane
pt2_00964	A	A1S	Potri.001G103000	Potri.001G103000(AS)	POPTR_0001s09510	sp|Q6RVV4|TIC32_PEA	Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum GN=TIC32 PE=1 SV=1	AT4G11410.1	| Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr4:6945127-6947186 REVERSE LENGTH=317	LOC_Os09g39670.1	protein|oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed	IMGA|contig_12100_1.1	Retinol dehydrogenase contig_12100 683-1422 E PREDN 20111014	GO:0008152|metabolic process	GO:0000166|nucleotide binding GO:0016491|oxidoreductase activity	GO:0009507|chloroplast
pt2_00965	A	A1S	Potri.001G102900	Potri.001G102900(AS)	POPTR_0001s09520	sp|Q9FZ36|M3K2_ARATH	Mitogen-activated protein kinase kinase kinase 2 OS=Arabidopsis thaliana GN=ANP2 PE=2 SV=1	AT1G63700.1	| Symbols: EMB71, YDA, MAPKKK4 | Protein kinase superfamily protein | chr1:23625208-23629031 REVERSE LENGTH=883	LOC_Os04g47240.1	protein|STE_MEKK_ste11_MAP3K.17 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	IMGA|Medtr5g017890.1	Mitogen-activated protein kinase kinase kinase A chr5 6370522-6365746 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0007155|cell adhesion GO:0009793|embryo development ending in seed dormancy GO:0010090|trichome morphogenesis GO:0010103|stomatal complex morphogenesis GO:0045010|actin nucleation GO:0048765|root hair cell differentiation GO:0071555|cell wall organization	GO:0004672|protein kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_00966	A	A1S	Potri.001G102800	Potri.001G102800(AS)	POPTR_0001s09530	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00967	A	A1S	Potri.001G102700	Potri.001G102700(AS)	POPTR_0001s09540	sp|O65780|GALE1_CYATE	UDP-glucose 4-epimerase GEPI42 OS=Cyamopsis tetragonoloba PE=2 SV=1	AT1G12780.1	| Symbols: UGE1, ATUGE1 | UDP-D-glucose/UDP-D-galactose 4-epimerase 1 | chr1:4356124-4358120 REVERSE LENGTH=351	LOC_Os09g35800.1	protein|UDP-glucose 4-epimerase, putative, expressed	IMGA|Medtr5g009170.1	UDP-glucose 4-epimerase chr5 1896587-1893288 F EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0006012|galactose metabolic process GO:0006950|response to stress GO:0044237|cellular metabolic process GO:0046369|galactose biosynthetic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0003978|UDP-glucose 4-epimerase activity GO:0016857|racemase and epimerase activity, acting on carbohydrates and derivatives GO:0046983|protein dimerization activity GO:0050662|coenzyme binding	GO:0005794|Golgi apparatus GO:0005829|cytosol GO:0005886|plasma membrane
pt2_00968	A	A2S	Potri.001G102600	Potri.001G102600(AS) Potri.001G102500(AA)	POPTR_0001s09550	sp|Q3EA54|CSPLL_ARATH	CASP-like protein At4g11655 OS=Arabidopsis thaliana GN=At4g11655 PE=2 SV=1	AT4G11655.1	| Symbols: | Uncharacterised protein family (UPF0497) | chr4:7038590-7039759 FORWARD LENGTH=208	NA	NA	NA	NA	NA	NA	GO:0016020|membrane
pt2_00969	A	A2S	Potri.001G102500	Potri.001G102500(AS) Potri.001G102600(AA)	POPTR_0001s09560	sp|Q8W4E1|RH47_ARATH	DEAD-box ATP-dependent RNA helicase 47, mitochondrial OS=Arabidopsis thaliana GN=RH47 PE=1 SV=2	AT1G12770.1	| Symbols: ISE1, EMB1586 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:4351888-4353543 FORWARD LENGTH=551	LOC_Os02g42406.1	protein|DEAD-box ATP-dependent RNA helicase, putative, expressed	IMGA|Medtr5g090120.1	DEAD-box ATP-dependent RNA helicase chr5 38208428-38214693 E EGN_Mt100125 20111014	GO:0009663|plasmodesma organization GO:0009793|embryo development ending in seed dormancy GO:0010497|plasmodesmata-mediated intercellular transport	GO:0003676|nucleic acid binding GO:0003724|RNA helicase activity GO:0004386|helicase activity GO:0005524|ATP binding GO:0008026|ATP-dependent helicase activity	GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_00970	A	A2S	Potri.001G102400	Potri.001G102400(AS) Potri.001G107600(DS)	POPTR_0001s09570	sp|P50700|OSL3_ARATH	Osmotin-like protein OSM34 OS=Arabidopsis thaliana GN=OSM34 PE=2 SV=2	AT4G11650.1	| Symbols: ATOSM34, OSM34 | osmotin 34 | chr4:7025127-7026113 REVERSE LENGTH=244	LOC_Os03g46070.1	protein|thaumatin, putative, expressed	IMGA|Medtr5g010640.1	Pathogenesis-related thaumatin-like protein chr5 2649377-2643755 F EGN_Mt100125 20111014	GO:0009651|response to salt stress GO:0009816|defense response to bacterium, incompatible interaction GO:0009817|defense response to fungus, incompatible interaction GO:0051707|response to other organism	NA	GO:0005576|extracellular region
pt2_00971	A	A2S	Potri.001G102300	Potri.001G102300(AS) Potri.003G129300(DS)	POPTR_0001s09580	sp|Q9FN67|Y5133_ARATH	BTB/POZ domain-containing protein At5g41330 OS=Arabidopsis thaliana GN=At5g41330 PE=2 SV=1	AT5G41330.1	| Symbols: | BTB/POZ domain with WD40/YVTN repeat-like protein | chr5:16536452-16537828 REVERSE LENGTH=458	LOC_Os07g23720.1	protein|B4-BTB4 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed	NA	NA	GO:0006813|potassium ion transport	GO:0005249|voltage-gated potassium channel activity	GO:0005634|nucleus GO:0008076|voltage-gated potassium channel complex GO:0016020|membrane
pt2_00972	A	A2S	Potri.001G102200	Potri.001G102200(AS) Potri.003G129400(DS)	POPTR_0001s09590	sp|Q9SRE5|Y1666_ARATH	Uncharacterized protein At1g76660 OS=Arabidopsis thaliana GN=At1g76660 PE=1 SV=1	AT5G52430.1	| Symbols: | hydroxyproline-rich glycoprotein family protein | chr5:21283093-21285045 REVERSE LENGTH=438	LOC_Os02g57610.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_00973	A	A3S	Potri.001G102000	Potri.001G102000(AS) Potri.001G102100(AS) Potri.003G129500(DS)	POPTR_0001s09600	sp|P04825|AMPN_ECOLI	Aminopeptidase N OS=Escherichia coli (strain K12) GN=pepN PE=1 SV=2	AT1G63770.3	| Symbols: | Peptidase M1 family protein | chr1:23657791-23664243 REVERSE LENGTH=987	LOC_Os08g44860.8	protein|aminopeptidase, putative, expressed	IMGA|contig_98730_1.1	Aminopeptidase N contig_98730 766-35 H PREDN 20111014	GO:0006508|proteolysis GO:0019243|methylglyoxal catabolic process to D-lactate GO:0046686|response to cadmium ion	GO:0008237|metallopeptidase activity GO:0008270|zinc ion binding	GO:0005773|vacuole GO:0005829|cytosol GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope GO:0048046|apoplast
pt2_00974	A	A2S	Potri.001G101900	Potri.001G101900(AS) Potri.003G129700(DS)	POPTR_0001s09610	sp|P42748|UBC4_ARATH	Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana GN=UBC4 PE=2 SV=2	AT5G41340.1	| Symbols: UBC4, ATUBC4 | ubiquitin conjugating enzyme 4 | chr5:16538296-16539956 REVERSE LENGTH=187	LOC_Os10g31000.1	protein|ubiquitin-conjugating enzyme, putative, expressed	IMGA|Medtr5g075580.1	Ubiquitin carrier protein chr5 31157779-31152864 E EGN_Mt100125 20111014	GO:0006511|ubiquitin-dependent protein catabolic process	GO:0004842|ubiquitin-protein ligase activity GO:0016881|acid-amino acid ligase activity	GO:0005634|nucleus GO:0005829|cytosol
pt2_00975	A	A1S	Potri.001G101800	Potri.001G101800(AS)	POPTR_0001s09620	sp|Q9LDD4|ARID2_ARATH	AT-rich interactive domain-containing protein 2 OS=Arabidopsis thaliana GN=ARID2 PE=2 SV=1	AT4G11400.1	| Symbols: | ARID/BRIGHT DNA-binding domain;ELM2 domain protein | chr4:6938717-6940539 FORWARD LENGTH=573	LOC_Os04g08410.1	protein|ELM2 domain containing protein, putative, expressed	IMGA|contig_55942_1.1	ARID/BRIGHT DNA-binding domain-containing protein contig_55942 4683-1604 H PREDN 20111014	NA	GO:0003677|DNA binding	GO:0005622|intracellular GO:0005634|nucleus GO:0005773|vacuole
pt2_00976	A	A2S	Potri.001G101700	Potri.001G101700(AS) Potri.003G129900(DS)	POPTR_0001s09630	sp|Q8LE94|RING3_ARATH	E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana GN=At3g02290 PE=2 SV=1	AT5G41350.1	| Symbols: | RING/U-box superfamily protein | chr5:16542026-16543092 REVERSE LENGTH=212	LOC_Os11g18947.1	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr5g046970.1	E3 ubiquitin-protein ligase chr5 20175519-20174021 I EGN_Mt100125 20111014	GO:0006914|autophagy GO:0045892|negative regulation of transcription, DNA-dependent	GO:0008270|zinc ion binding	GO:0005634|nucleus GO:0005739|mitochondrion
pt2_00977	A	A1S	Potri.001G101600	Potri.001G101600(AS)	POPTR_0001s09640	NA	NA	AT1G75060.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19330.2); Has 104 Blast hits to 104 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 104; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:28181481-28183285 REVERSE LENGTH=241	LOC_Os04g08450.2	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00978	C	C1S	Potri.001G101500	Potri.001G101500(CS)	NA	NA	AT4G35785.3	| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr4:16953708-16955127 REVERSE LENGTH=207	LOC_Os08g29650.1	protein|RNA recognition motif containing protein, expressed	IMGA|Medtr5g023060.1	Scaffold attachment factor B1 chr5 8907854-8910694 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding	GO:0005634|nucleus GO:0030529|ribonucleoprotein complex
pt2_00979	A	A1S	Potri.001G101400	Potri.001G101400(AS)	POPTR_0001s09660	sp|O81742|APBLC_ARATH	Beta-adaptin-like protein C OS=Arabidopsis thaliana GN=BETAC-AD PE=1 SV=2	AT4G23460.1	| Symbols: | Adaptin family protein | chr4:12243899-12248898 REVERSE LENGTH=893	LOC_Os03g23950.1	protein|adapitin protein, putative, expressed	IMGA|Medtr5g079920.1	AP-3 complex subunit beta-2 chr5 33184416-33174348 E EGN_Mt100125 20111014	GO:0006886|intracellular protein transport GO:0015031|protein transport GO:0016192|vesicle-mediated transport	GO:0008565|protein transporter activity GO:0030276|clathrin binding	GO:0005634|nucleus GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0030117|membrane coat GO:0030131|clathrin adaptor complex
pt2_00980	A	A1S	Potri.001G101300	Potri.001G101300(AS)	POPTR_0001s09670	sp|Q38861|XPB1_ARATH	DNA repair helicase XPB1 OS=Arabidopsis thaliana GN=XPB1 PE=2 SV=3	AT5G41370.1	| Symbols: XPB1, ATXPB1 | homolog of xeroderma pigmentosum complementation group B 1 | chr5:16551337-16555792 FORWARD LENGTH=767	LOC_Os01g49680.1	protein|DNA repair helicase XPB2, putative, expressed	NA	NA	GO:0006289|nucleotide-excision repair GO:0009411|response to UV GO:0009636|response to toxin	GO:0003676|nucleic acid binding GO:0003677|DNA binding GO:0004003|ATP-dependent DNA helicase activity GO:0004386|helicase activity GO:0005524|ATP binding GO:0008026|ATP-dependent helicase activity GO:0016787|hydrolase activity	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_00981	A	A1S	Potri.001G101300	Potri.001G101300(AS)	POPTR_0001s09670	sp|Q38861|XPB1_ARATH	DNA repair helicase XPB1 OS=Arabidopsis thaliana GN=XPB1 PE=2 SV=3	AT5G41370.1	| Symbols: XPB1, ATXPB1 | homolog of xeroderma pigmentosum complementation group B 1 | chr5:16551337-16555792 FORWARD LENGTH=767	LOC_Os01g49680.1	protein|DNA repair helicase XPB2, putative, expressed	NA	NA	GO:0006289|nucleotide-excision repair GO:0009411|response to UV GO:0009636|response to toxin	GO:0003676|nucleic acid binding GO:0003677|DNA binding GO:0004003|ATP-dependent DNA helicase activity GO:0004386|helicase activity GO:0005524|ATP binding GO:0008026|ATP-dependent helicase activity GO:0016787|hydrolase activity	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_00982	A	A1S	Potri.001G101200	Potri.001G101200(AS)	POPTR_0001s09680	NA	NA	AT5G41380.1	| Symbols: | CCT motif family protein | chr5:16562129-16563553 REVERSE LENGTH=307	LOC_Os05g38990.1	protein|CCT motif family protein, expressed	IMGA|Medtr5g010120.1	Zinc finger protein CONSTANS-like protein chr5 2398574-2400307 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00983	A	A1S	Potri.001G101100	Potri.001G101100(AS)	POPTR_0001s09690	NA	NA	AT1G63830.3	| Symbols: | PLAC8 family protein | chr1:23685408-23687098 FORWARD LENGTH=232	LOC_Os03g03180.1	protein|uncharacterized Cys-rich domain containing protein, putative, expressed	NA	NA	NA	NA	GO:0005886|plasma membrane GO:0016020|membrane
pt2_00984	B	B1S	Potri.001G101000	Potri.001G101000(BS)	POPTR_0001s09700	sp|Q9SUS5|RHA1B_ARATH	E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis thaliana GN=RHA1B PE=2 SV=1	AT3G61460.1	| Symbols: BRH1 | brassinosteroid-responsive RING-H2 | chr3:22741701-22742213 REVERSE LENGTH=170	LOC_Os02g45710.1	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr5g010100.1	RING zinc finger protein-like protein chr5 2395799-2396606 F EGN_Mt100125 20111014	GO:0007165|signal transduction GO:0009414|response to water deprivation GO:0009611|response to wounding GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009753|response to jasmonic acid stimulus GO:0042538|hyperosmotic salinity response	GO:0008270|zinc ion binding	NA
pt2_00985	A	A2S	Potri.001G100900	Potri.001G100900(AS) Potri.003G131000(DS)	POPTR_0001s09710	sp|Q9CAJ9|Y1385_ARATH	BTB/POZ domain-containing protein At1g63850 OS=Arabidopsis thaliana GN=At1g63850 PE=1 SV=1	AT1G63850.1	| Symbols: | BTB/POZ domain-containing protein | chr1:23696962-23698708 FORWARD LENGTH=548	LOC_Os04g49060.1	protein|H-BTB3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed	NA	NA	GO:0008150|biological_process	NA	GO:0005634|nucleus
pt2_00986	A	A1S	Potri.001G100800	Potri.001G100800(AS)	POPTR_0001s09720	sp|Q38897|BEL1_ARATH	Homeobox protein BEL1 homolog OS=Arabidopsis thaliana GN=BEL1 PE=1 SV=2	AT5G41410.1	| Symbols: BEL1 | POX (plant homeobox) family protein | chr5:16580424-16583770 FORWARD LENGTH=611	LOC_Os10g39030.1	protein|homeobox domain containing protein, expressed	IMGA|Medtr5g018860.1	BEL1-like homeodomain protein chr5 6810765-6801813 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0048481|ovule development GO:0048513|organ development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus GO:0005829|cytosol GO:0009506|plasmodesma
pt2_00987	A	A1S	Potri.001G100700	Potri.001G100700(AS)	POPTR_0001s09730	NA	NA	AT4G23490.1	| Symbols: | Protein of unknown function (DUF604) | chr4:12251580-12253973 REVERSE LENGTH=526	LOC_Os04g48950.1	protein|fringe-related protein, putative, expressed	IMGA|Medtr5g010070.1	hypothetical protein chr5 2381571-2385382 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0016757|transferase activity, transferring glycosyl groups	GO:0005794|Golgi apparatus
pt2_00988	A	A1S	Potri.001G100600	Potri.001G100600(AS)	POPTR_0001s09740	sp|Q9SVP7|PP307_ARATH	Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2	AT4G13650.1	| Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr4:7939611-7942898 REVERSE LENGTH=1064	LOC_Os01g25270.1	protein|pentatricopeptide repeat protein PPR986-12, putative, expressed	IMGA|Medtr1g071240.1	Pentatricopeptide repeat-containing protein chr1 17511913-17505644 H EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_00989	A	A1S	Potri.001G100500	Potri.001G100500(AS)	POPTR_0001s09750	NA	NA	AT5G41470.1	| Symbols: | Nuclear transport factor 2 (NTF2) family protein | chr5:16593953-16595419 FORWARD LENGTH=277	LOC_Os03g64380.1	protein|expressed protein	IMGA|Medtr5g010050.1	hypothetical protein chr5 2376223-2374874 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_00990	A	A1S	Potri.001G100300	Potri.001G100300(AS)	POPTR_0001s09760	NA	NA	AT1G28140.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2301, transmembrane (InterPro:IPR019275); Has 140 Blast hits to 140 proteins in 72 species: Archae - 0; Bacteria - 86; Metazoa - 10; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). | chr1:9833029-9834390 REVERSE LENGTH=280	LOC_Os03g63360.1	protein|glutathione S-transferase, putative, expressed	IMGA|Medtr1g099520.1	hypothetical protein chr1 28893952-28891727 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_00991	A	A1S	Potri.001G100200	Potri.001G100200(AS)	POPTR_0001s09770	sp|O49814|BCH2_CAPAN	Beta-carotene hydroxylase 2, chloroplastic (Fragment) OS=Capsicum annuum GN=CA2 PE=2 SV=1	AT4G25700.1	| Symbols: BETA-OHASE 1, B1, chy1, BCH1 | beta-hydroxylase 1 | chr4:13094142-13095866 REVERSE LENGTH=310	LOC_Os03g03370.1	protein|fatty acid hydroxylase, putative, expressed	IMGA|Medtr1g100070.2	Beta-carotene hydroxylase chr1 29105158-29106864 F EGN_Mt100125 20111014	GO:0006633|fatty acid biosynthetic process GO:0016119|carotene metabolic process GO:0016123|xanthophyll biosynthetic process GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0010291|carotene beta-ring hydroxylase activity GO:0016491|oxidoreductase activity	GO:0009507|chloroplast
pt2_00992	A	A1S	Potri.001G100100	Potri.001G100100(AS)	POPTR_0001s09780	sp|Q8LGD1|SP1L5_ARATH	Protein SPIRAL1-like 5 OS=Arabidopsis thaliana GN=SP1L5 PE=2 SV=1	AT4G23496.1	| Symbols: SP1L5 | SPIRAL1-like5 | chr4:12257914-12258297 REVERSE LENGTH=99	LOC_Os03g30430.1	protein|nitrilase-associated protein, putative, expressed	IMGA|Medtr5g045310.1	hypothetical protein chr5 19471059-19467979 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005886|plasma membrane
pt2_00993	A	A1S	Potri.001G100000	Potri.001G100000(AS)	POPTR_0001s09790	sp|A7PZL3|PGLR_VITVI	Probable polygalacturonase OS=Vitis vinifera GN=GSVIVT00026920001 PE=1 SV=1	AT4G23500.1	| Symbols: | Pectin lyase-like superfamily protein | chr4:12264640-12267074 FORWARD LENGTH=495	LOC_Os03g03350.1	protein|polygalacturonase, putative, expressed	IMGA|Medtr1g100060.1	hypothetical protein chr1 29104014-29100579 H EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0004650|polygalacturonase activity	GO:0005576|extracellular region GO:0005618|cell wall
pt2_00994	A	A1S	Potri.001G099900	Potri.001G099900(AS)	POPTR_0001s09800	sp|Q39025|MPK5_ARATH	Mitogen-activated protein kinase 5 OS=Arabidopsis thaliana GN=MPK5 PE=2 SV=2	AT4G11330.1	| Symbols: ATMPK5, MPK5 | MAP kinase 5 | chr4:6892143-6893845 FORWARD LENGTH=376	LOC_Os10g38950.1	protein|CGMC_MAPKCMGC_2_ERK.14 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	IMGA|Medtr5g010030.1	Mitogen-activated protein kinase chr5 2369912-2371946 F EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0000302|response to reactive oxygen species GO:0000303|response to superoxide GO:0006468|protein phosphorylation GO:0006612|protein targeting to membrane GO:0006950|response to stress GO:0006970|response to osmotic stress GO:0006979|response to oxidative stress GO:0007165|signal transduction GO:0009409|response to cold GO:0009605|response to external stimulus GO:0009651|response to salt stress GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009743|response to carbohydrate stimulus GO:0009751|response to salicylic acid stimulus GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009864|induced systemic resistance, jasmonic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009873|ethylene mediated signaling pathway GO:0010120|camalexin biosynthetic process GO:0010224|response to UV-B GO:0010363|regulation of plant-type hypersensitive response GO:0010374|stomatal complex development GO:0016310|phosphorylation GO:0030968|endoplasmic reticulum unfolded protein response GO:0031348|negative regulation of defense response GO:0035556|intracellular signal transduction GO:0042542|response to hydrogen peroxide GO:0042742|defense response to bacterium GO:0043069|negative regulation of programmed cell death GO:0048364|root development GO:0048481|ovule development GO:0050832|defense response to fungus GO:0080136|priming of cellular response to stress GO:2000037|regulation of stomatal complex patterning GO:2000038|regulation of stomatal complex development	GO:0004672|protein kinase activity GO:0004707|MAP kinase activity GO:0005515|protein binding GO:0016301|kinase activity	GO:0005634|nucleus GO:0005802|trans-Golgi network GO:0009524|phragmoplast GO:0009574|preprophase band
pt2_00995	A	A2S	Potri.001G099800	Potri.001G099800(AS) Potri.003G132000(DS)	POPTR_0001s09810	sp|Q8LPH6|MYB86_ARATH	Transcription factor MYB86 OS=Arabidopsis thaliana GN=MYB86 PE=2 SV=1	AT1G63910.1	| Symbols: AtMYB103, MYB103 | myb domain protein 103 | chr1:23719968-23721625 REVERSE LENGTH=370	LOC_Os08g05520.1	protein|myb-like DNA-binding domain containing protein, putative, expressed	IMGA|Medtr5g010020.2	40S ribosomal protein S10-like protein chr5 2353539-2367303 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0045893|positive regulation of transcription, DNA-dependent GO:1901430|positive regulation of syringal lignin biosynthetic process GO:2000652|regulation of secondary cell wall biogenesis	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00996	A	A1S	Potri.001G099700	Potri.001G099700(AS)	POPTR_0001s09820	NA	NA	AT1G63930.1	| Symbols: ROH1 | from the Czech 'roh' meaning 'corner' | chr1:23727927-23729174 FORWARD LENGTH=415	LOC_Os12g06780.1	protein|expressed protein	IMGA|contig_77945_1.1	Exocyst subunit Exo70-interacting protein Roh1 contig_77945 334-1767 F PREDN 20111014	GO:0009827|plant-type cell wall modification GO:0009860|pollen tube growth GO:0010214|seed coat development GO:0048354|mucilage biosynthetic process involved in seed coat development	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00997	A	A1S	Potri.001G099600	Potri.001G099600(AS)	POPTR_0001s09830	sp|P92947|MDARP_ARATH	Monodehydroascorbate reductase, chloroplastic OS=Arabidopsis thaliana GN=At1g63940 PE=2 SV=3	AT1G63940.2	| Symbols: MDAR6 | monodehydroascorbate reductase 6 | chr1:23730095-23733534 FORWARD LENGTH=493	LOC_Os08g05570.4	protein|monodehydroascorbate reductase, putative, expressed	IMGA|contig_53972_1.1	Monodehydroascorbate reductase contig_53972 3297-41 F PREDN 20111014	GO:0009409|response to cold GO:0042744|hydrogen peroxide catabolic process GO:0046686|response to cadmium ion GO:0055114|oxidation-reduction process	GO:0005524|ATP binding GO:0009055|electron carrier activity GO:0016491|oxidoreductase activity GO:0050660|flavin adenine dinucleotide binding	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0010319|stromule
pt2_00998	A	A1S	Potri.001G099500	Potri.001G099500(AS)	POPTR_0001s09840	NA	NA	AT1G01490.2	| Symbols: | Heavy metal transport/detoxification superfamily protein | chr1:180401-182066 REVERSE LENGTH=177	LOC_Os10g38870.1	protein|heavy metal-associated domain containing protein, expressed	IMGA|Medtr1g099800.1	hypothetical protein chr1 28995539-28994338 F EGN_Mt100125 20111014	GO:0030001|metal ion transport	GO:0046872|metal ion binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00999	A	A1S	Potri.001G099400	Potri.001G099400(AS)	POPTR_0001s09850	sp|P31531|1A1C_SOYBN	1-aminocyclopropane-1-carboxylate synthase OS=Glycine max GN=ACS1 PE=2 SV=1	AT4G11280.1	| Symbols: ACS6, ATACS6 | 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6 | chr4:6864168-6865922 FORWARD LENGTH=495	LOC_Os04g48850.1	protein|aminotransferase, classes I and II, domain containing protein, expressed	IMGA|Medtr5g015020.1	1-aminocyclopropane-1-carboxylate synthase chr5 4879142-4877065 E EGN_Mt100125 20111014	GO:0006979|response to oxidative stress GO:0009058|biosynthetic process GO:0009605|response to external stimulus GO:0009611|response to wounding GO:0009612|response to mechanical stimulus GO:0009693|ethylene biosynthetic process GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009753|response to jasmonic acid stimulus GO:0010200|response to chitin GO:0042218|1-aminocyclopropane-1-carboxylate biosynthetic process GO:0071281|cellular response to iron ion	GO:0003824|catalytic activity GO:0005515|protein binding GO:0016740|transferase activity GO:0016847|1-aminocyclopropane-1-carboxylate synthase activity GO:0030170|pyridoxal phosphate binding GO:0042802|identical protein binding	GO:0005737|cytoplasm
pt2_01000	A	A2S	Potri.001G099300	Potri.001G099300(AS) Potri.003G132400(DS)	POPTR_0001s09860	sp|Q9CAK8|ISPF_ARATH	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic OS=Arabidopsis thaliana GN=ISPF PE=1 SV=1	AT1G63970.1	| Symbols: ISPF, MECPS | isoprenoid F | chr1:23738923-23740336 REVERSE LENGTH=231	LOC_Os02g45660.1	protein|2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplast precursor, putative, expressed	IMGA|Medtr5g010010.1	2-C-methyl-D-erythritol 2 4-cyclodiphosphate synthase chr5 2339269-2343000 F EGN_Mt100125 20111014	GO:0006098|pentose-phosphate shunt GO:0006364|rRNA processing GO:0006636|unsaturated fatty acid biosynthetic process GO:0006655|phosphatidylglycerol biosynthetic process GO:0006744|ubiquinone biosynthetic process GO:0009073|aromatic amino acid family biosynthetic process GO:0009637|response to blue light GO:0009644|response to high light intensity GO:0009744|response to sucrose stimulus GO:0009965|leaf morphogenesis GO:0010027|thylakoid membrane organization GO:0010114|response to red light GO:0010155|regulation of proton transport GO:0010218|response to far red light GO:0015995|chlorophyll biosynthetic process GO:0016114|terpenoid biosynthetic process GO:0016117|carotenoid biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019344|cysteine biosynthetic process GO:0030154|cell differentiation GO:0045893|positive regulation of transcription, DNA-dependent	GO:0008685|2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_01001	A	A1S	Potri.001G099300	Potri.001G099300(AS)	POPTR_0001s09860	sp|Q9CAK8|ISPF_ARATH	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic OS=Arabidopsis thaliana GN=ISPF PE=1 SV=1	AT1G63970.1	| Symbols: ISPF, MECPS | isoprenoid F | chr1:23738923-23740336 REVERSE LENGTH=231	LOC_Os02g45660.1	protein|2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplast precursor, putative, expressed	IMGA|Medtr5g010010.1	2-C-methyl-D-erythritol 2 4-cyclodiphosphate synthase chr5 2339269-2343000 F EGN_Mt100125 20111014	GO:0006098|pentose-phosphate shunt GO:0006364|rRNA processing GO:0006636|unsaturated fatty acid biosynthetic process GO:0006655|phosphatidylglycerol biosynthetic process GO:0006744|ubiquinone biosynthetic process GO:0009073|aromatic amino acid family biosynthetic process GO:0009637|response to blue light GO:0009644|response to high light intensity GO:0009744|response to sucrose stimulus GO:0009965|leaf morphogenesis GO:0010027|thylakoid membrane organization GO:0010114|response to red light GO:0010155|regulation of proton transport GO:0010218|response to far red light GO:0015995|chlorophyll biosynthetic process GO:0016114|terpenoid biosynthetic process GO:0016117|carotenoid biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019344|cysteine biosynthetic process GO:0030154|cell differentiation GO:0045893|positive regulation of transcription, DNA-dependent	GO:0008685|2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_01002	A	A1S	Potri.001G099300	Potri.001G099300(AS)	POPTR_0001s09860	sp|Q9CAK8|ISPF_ARATH	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic OS=Arabidopsis thaliana GN=ISPF PE=1 SV=1	AT1G63970.1	| Symbols: ISPF, MECPS | isoprenoid F | chr1:23738923-23740336 REVERSE LENGTH=231	LOC_Os02g45660.1	protein|2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplast precursor, putative, expressed	IMGA|Medtr5g010010.1	2-C-methyl-D-erythritol 2 4-cyclodiphosphate synthase chr5 2339269-2343000 F EGN_Mt100125 20111014	GO:0006098|pentose-phosphate shunt GO:0006364|rRNA processing GO:0006636|unsaturated fatty acid biosynthetic process GO:0006655|phosphatidylglycerol biosynthetic process GO:0006744|ubiquinone biosynthetic process GO:0009073|aromatic amino acid family biosynthetic process GO:0009637|response to blue light GO:0009644|response to high light intensity GO:0009744|response to sucrose stimulus GO:0009965|leaf morphogenesis GO:0010027|thylakoid membrane organization GO:0010114|response to red light GO:0010155|regulation of proton transport GO:0010218|response to far red light GO:0015995|chlorophyll biosynthetic process GO:0016114|terpenoid biosynthetic process GO:0016117|carotenoid biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019344|cysteine biosynthetic process GO:0030154|cell differentiation GO:0045893|positive regulation of transcription, DNA-dependent	GO:0008685|2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_01003	A	A1S	Potri.001G099200	Potri.001G099200(AS)	POPTR_0001s09870	NA	NA	AT5G41560.1	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin ligase, Det1/DDB1-complexing (InterPro:IPR018276); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:16621427-16622619 REVERSE LENGTH=101	LOC_Os03g03420.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_01004	A	A1S	Potri.001G099100	Potri.001G099100(AS)	POPTR_0001s09890	sp|Q9M4A1|SPO12_ARATH	Meiotic recombination protein SPO11-2 OS=Arabidopsis thaliana GN=SPO11-2 PE=1 SV=1	AT1G63990.1	| Symbols: SPO11-2 | sporulation 11-2 | chr1:23743323-23745351 REVERSE LENGTH=383	LOC_Os08g06050.1	protein|OsTOP6A2 - Topoisomerase 6 subunit A homolog 2, expressed	IMGA|Medtr5g009990.1	Meiotic recombination protein SPO11-2 chr5 2330859-2334488 H EGN_Mt100125 20111014	GO:0006259|DNA metabolic process GO:0006265|DNA topological change GO:0006302|double-strand break repair GO:0006312|mitotic recombination GO:0007062|sister chromatid cohesion GO:0007126|meiosis GO:0007129|synapsis GO:0007131|reciprocal meiotic recombination GO:0007155|cell adhesion GO:0009553|embryo sac development GO:0009555|pollen development GO:0010090|trichome morphogenesis GO:0010332|response to gamma radiation GO:0032204|regulation of telomere maintenance GO:0032504|multicellular organism reproduction GO:0033044|regulation of chromosome organization GO:0042138|meiotic DNA double-strand break formation GO:0043247|telomere maintenance in response to DNA damage GO:0045010|actin nucleation GO:0045132|meiotic chromosome segregation GO:0048316|seed development GO:0048765|root hair cell differentiation GO:0051026|chiasma assembly GO:0071555|cell wall organization	GO:0003677|DNA binding GO:0003824|catalytic activity GO:0003918|DNA topoisomerase (ATP-hydrolyzing) activity GO:0005524|ATP binding	GO:0005634|nucleus GO:0005694|chromosome
pt2_01005	A	A1S	Potri.001G099000	Potri.001G099000(AS)	POPTR_0001s09900	sp|Q9FLX8|WRK27_ARATH	Probable WRKY transcription factor 27 OS=Arabidopsis thaliana GN=WRKY27 PE=2 SV=1	AT5G52830.1	| Symbols: WRKY27, ATWRKY27 | WRKY DNA-binding protein 27 | chr5:21410996-21412218 FORWARD LENGTH=348	LOC_Os02g16540.1	protein|WRKY39, expressed	IMGA|Medtr1g009380.1	WRKY transcription factor chr1 1920992-1923320 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0007263|nitric oxide mediated signal transduction GO:0009739|response to gibberellin stimulus GO:0042742|defense response to bacterium GO:0045892|negative regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_01006	A	A1S	Potri.001G098800	Potri.001G098800(AS)	POPTR_0001s09910	sp|P22503|GUN_PHAVU	Endoglucanase OS=Phaseolus vulgaris PE=2 SV=2	AT4G09740.1	| Symbols: AtGH9B14, GH9B14 | glycosyl hydrolase 9B14 | chr4:6142706-6145003 REVERSE LENGTH=478	LOC_Os08g29770.1	protein|endoglucanase, putative, expressed	IMGA|Medtr5g009970.1	Endo-1 4-beta-glucanase chr5 2324879-2327935 F EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0005576|extracellular region
pt2_01007	A	A1S	Potri.001G098700	Potri.001G098700(AS)	POPTR_0001s09920	NA	NA	AT4G11270.1	| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr4:6854461-6859490 FORWARD LENGTH=1446	LOC_Os06g22550.1	protein|transducin family protein, putative, expressed	NA	NA	GO:0006486|protein glycosylation GO:0008150|biological_process	GO:0000166|nucleotide binding	GO:0005829|cytosol
pt2_01008	A	A1S	Potri.001G098600	Potri.001G098600(AS)	POPTR_0001s09930	sp|P48488|PP1_MEDSV	Serine/threonine-protein phosphatase PP1 OS=Medicago sativa subsp. varia GN=PP1 PE=2 SV=1	AT4G11240.1	| Symbols: TOPP7 | Calcineurin-like metallo-phosphoesterase superfamily protein | chr4:6847333-6849032 FORWARD LENGTH=322	LOC_Os06g06880.1	protein|Ser/Thr protein phosphatase family protein, putative, expressed	IMGA|Medtr1g079950.1	Serine/threonine protein phosphatase PP1 chr1 20043884-20051001 F EGN_Mt100125 20111014	GO:0006470|protein dephosphorylation GO:0051604|protein maturation	GO:0004722|protein serine/threonine phosphatase activity GO:0016787|hydrolase activity	GO:0000164|protein phosphatase type 1 complex GO:0005575|cellular_component GO:0005634|nucleus GO:0005730|nucleolus GO:0005737|cytoplasm
pt2_01009	A	A1S	Potri.001G098600	Potri.001G098600(AS)	POPTR_0001s09930	sp|P48488|PP1_MEDSV	Serine/threonine-protein phosphatase PP1 OS=Medicago sativa subsp. varia GN=PP1 PE=2 SV=1	AT4G11240.1	| Symbols: TOPP7 | Calcineurin-like metallo-phosphoesterase superfamily protein | chr4:6847333-6849032 FORWARD LENGTH=322	LOC_Os06g06880.1	protein|Ser/Thr protein phosphatase family protein, putative, expressed	IMGA|Medtr1g079950.1	Serine/threonine protein phosphatase PP1 chr1 20043884-20051001 F EGN_Mt100125 20111014	GO:0006470|protein dephosphorylation GO:0051604|protein maturation	GO:0004722|protein serine/threonine phosphatase activity GO:0016787|hydrolase activity	GO:0000164|protein phosphatase type 1 complex GO:0005575|cellular_component GO:0005634|nucleus GO:0005730|nucleolus GO:0005737|cytoplasm
pt2_01010	A	A1S	Potri.001G098500	Potri.001G098500(AS)	POPTR_0001s09950	NA	NA	AT1G64050.2	| Symbols: | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. | chr1:23762584-23765714 FORWARD LENGTH=666	LOC_Os02g16600.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01011	A	A1S	Potri.001G098400	Potri.001G098400(AS)	POPTR_0001s09960	sp|A0MFL4|LOR17_ARATH	Protein LURP-one-related 17 OS=Arabidopsis thaliana GN=At5g41590 PE=2 SV=2	AT5G41590.1	| Symbols: | Protein of unknown function (DUF567) | chr5:16632221-16633896 REVERSE LENGTH=221	LOC_Os05g40630.1	protein|DUF567 domain containing protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_01012	A	A1S	Potri.001G098300	Potri.001G098300(AS)	POPTR_0001s09970	sp|Q948U0|RBOHA_SOLTU	Respiratory burst oxidase homolog protein A OS=Solanum tuberosum GN=RBOHA PE=1 SV=1	AT1G64060.1	| Symbols: ATRBOH F, ATRBOHF, RBOHAP108, RBOHF, RBOH F | respiratory burst oxidase protein F | chr1:23770266-23776317 FORWARD LENGTH=944	LOC_Os05g45210.3	protein|respiratory burst oxidase, putative, expressed	IMGA|contig_76663_1.1	Respiratory burst oxidase protein F contig_76663 746-1988 E PREDN 20111014	GO:0000165|MAPK cascade GO:0002679|respiratory burst involved in defense response GO:0006612|protein targeting to membrane GO:0006952|defense response GO:0007165|signal transduction GO:0007231|osmosensory signaling pathway GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009605|response to external stimulus GO:0009611|response to wounding GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009753|response to jasmonic acid stimulus GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009873|ethylene mediated signaling pathway GO:0010119|regulation of stomatal movement GO:0010228|vegetative to reproductive phase transition of meristem GO:0010363|regulation of plant-type hypersensitive response GO:0016926|protein desumoylation GO:0030968|endoplasmic reticulum unfolded protein response GO:0031348|negative regulation of defense response GO:0033500|carbohydrate homeostasis GO:0035556|intracellular signal transduction GO:0042538|hyperosmotic salinity response GO:0043069|negative regulation of programmed cell death GO:0050665|hydrogen peroxide biosynthetic process GO:0050832|defense response to fungus GO:0052542|defense response by callose deposition GO:0072593|reactive oxygen species metabolic process	GO:0004601|peroxidase activity GO:0005506|iron ion binding GO:0005509|calcium ion binding GO:0009055|electron carrier activity GO:0016174|NAD(P)H oxidase activity GO:0016491|oxidoreductase activity GO:0050660|flavin adenine dinucleotide binding GO:0050664|oxidoreductase activity, acting on NADH or NADPH, oxygen as acceptor	GO:0005886|plasma membrane GO:0005887|integral to plasma membrane
pt2_01013	A	A1S	Potri.001G098200	Potri.001G098200(AS)	POPTR_0001s09980	NA	NA	AT1G64065.1	| Symbols: | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | chr1:23778628-23779272 FORWARD LENGTH=214	LOC_Os01g53470.1	protein|harpin-induced protein 1 domain containing protein, expressed	IMGA|Medtr5g009910.1	hypothetical protein chr5 2291145-2290576 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0016020|membrane
pt2_01014	A	A1S	Potri.001G098100	Potri.001G098100(AS)	POPTR_0001s09990	NA	NA	AT2G46150.1	| Symbols: | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | chr2:18961424-18962089 FORWARD LENGTH=221	LOC_Os05g45070.1	protein|harpin-induced protein 1 domain containing protein, expressed	IMGA|Medtr5g009910.1	hypothetical protein chr5 2291145-2290576 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005886|plasma membrane
pt2_01015	A	A1S	Potri.001G098000	Potri.001G098000(AS)	POPTR_0001s10000	sp|Q9SH58|MAKR2_ARATH	Probable membrane-associated kinase regulator 2 OS=Arabidopsis thaliana GN=MAKR2 PE=2 SV=1	AT1G64080.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52870.1); Has 1546 Blast hits to 738 proteins in 176 species: Archae - 0; Bacteria - 143; Metazoa - 278; Fungi - 131; Plants - 95; Viruses - 4; Other Eukaryotes - 895 (source: NCBI BLink). | chr1:23785230-23786557 REVERSE LENGTH=411	LOC_Os01g12640.1	protein|expressed protein	IMGA|Medtr5g009870.1	hypothetical protein chr5 2264460-2266139 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_01016	G	G2	NA	NA	POPTR_0001s10010	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01017	A	A2S	Potri.001G097900	Potri.001G097900(AS) Potri.T144300(BS)	POPTR_0001s10020	sp|P23548|GUN_PAEPO	Endoglucanase OS=Paenibacillus polymyxa PE=3 SV=2	AT1G13130.1	| Symbols: | Cellulase (glycosyl hydrolase family 5) protein | chr1:4474726-4477820 FORWARD LENGTH=552	LOC_Os04g40510.2	protein|glycosyl hydrolase family 5 protein, putative, expressed	IMGA|Medtr5g088330.1	Oligoribonuclease chr5 37283827-37298839 E EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0043169|cation binding	GO:0009507|chloroplast
pt2_01018	A	A2S	Potri.T144400	Potri.T144400(AS) Potri.001G097800(BS)	POPTR_0001s10030	sp|Q2G6G9|RL25_NOVAD	50S ribosomal protein L25 OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=rplY PE=3 SV=1	AT4G23620.1	| Symbols: | Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain | chr4:12315016-12316659 REVERSE LENGTH=264	LOC_Os01g41030.1	protein|ribosomal protein L25, putative, expressed	NA	NA	GO:0006412|translation GO:0006783|heme biosynthetic process	GO:0003735|structural constituent of ribosome GO:0008097|5S rRNA binding GO:0008270|zinc ion binding GO:0050897|cobalt ion binding	GO:0005622|intracellular GO:0005840|ribosome GO:0009507|chloroplast
pt2_01019	A	A1S	Potri.001G097700	Potri.001G097700(AS)	POPTR_0001s10040	sp|Q9SUR3|RTNLA_ARATH	Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1	AT4G23630.1	| Symbols: BTI1, RTNLB1 | VIRB2-interacting protein 1 | chr4:12318070-12319574 FORWARD LENGTH=275	LOC_Os05g45050.1	protein|reticulon domain containing protein, putative, expressed	IMGA|Medtr5g090340.3	Reticulon-like protein B8 chr5 38304798-38301150 F EGN_Mt100125 20111014	GO:0010286|heat acclimation GO:0071786|endoplasmic reticulum tubular network organization	NA	GO:0005634|nucleus GO:0005783|endoplasmic reticulum GO:0005789|endoplasmic reticulum membrane GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0071458|integral to cytosolic side of endoplasmic reticulum membrane GO:0071782|endoplasmic reticulum tubular network
pt2_01020	A	A1S	Potri.001G097600	Potri.001G097600(AS)	POPTR_0001s10050	sp|Q9P7J5|YJNA_SCHPO	Uncharacterized AAA domain-containing protein C24B10.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC24B10.10c PE=2 SV=1	AT1G64110.3	| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:23796887-23801255 REVERSE LENGTH=827	LOC_Os01g12660.1	protein|AAA-type ATPase family protein, putative, expressed	IMGA|Medtr5g009840.1	Spastin chr5 2248882-2254570 H EGN_Mt100125 20111014	GO:0048235|pollen sperm cell differentiation	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity	GO:0005886|plasma membrane
pt2_01021	A	A1S	Potri.001G097500	Potri.001G097500(AS)	POPTR_0001s10060	NA	NA	AT5G60750.1	| Symbols: | CAAX amino terminal protease family protein | chr5:24431072-24433199 FORWARD LENGTH=347	LOC_Os06g30910.1	protein|CAAX amino terminal protease family protein, putative, expressed	NA	NA	GO:0006508|proteolysis GO:0006569|tryptophan catabolic process GO:0009684|indoleacetic acid biosynthetic process	GO:0004175|endopeptidase activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_01022	A	A1S	Potri.001G097400	Potri.001G097400(AS)	POPTR_0001s10070	sp|Q42479|CDPK3_ARATH	Calcium-dependent protein kinase 3 OS=Arabidopsis thaliana GN=CPK3 PE=1 SV=1	AT4G23650.1	| Symbols: CDPK6, CPK3 | calcium-dependent protein kinase 6 | chr4:12324967-12327415 REVERSE LENGTH=529	LOC_Os01g43410.1	protein|CAMK_CAMK_like.9 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	IMGA|Medtr5g009830.1	Calcium dependent protein kinase chr5 2241283-2246294 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006499|N-terminal protein myristoylation GO:0006970|response to osmotic stress GO:0009651|response to salt stress GO:0009738|abscisic acid mediated signaling pathway GO:0010119|regulation of stomatal movement GO:0010359|regulation of anion channel activity GO:0032880|regulation of protein localization GO:0046686|response to cadmium ion GO:0046777|protein autophosphorylation GO:0051049|regulation of transport	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004683|calmodulin-dependent protein kinase activity GO:0005509|calcium ion binding GO:0005515|protein binding GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005773|vacuole GO:0005829|cytosol GO:0005886|plasma membrane GO:0009507|chloroplast GO:0016020|membrane
pt2_01023	A	A1S	Potri.001G097300	Potri.001G097300(AS)	POPTR_0001s10080	sp|Q9LS46|ALMT9_ARATH	Aluminum-activated malate transporter 9 OS=Arabidopsis thaliana GN=ALMT9 PE=2 SV=1	AT3G18440.1	| Symbols: AtALMT9, ALMT9 | aluminum-activated malate transporter 9 | chr3:6328181-6330652 FORWARD LENGTH=598	LOC_Os01g12210.1	protein|aluminum-activated malate transporter, putative, expressed	IMGA|Medtr5g014310.1	hypothetical protein chr5 4526352-4523171 H EGN_Mt100125 20111014	GO:0010044|response to aluminum ion GO:0015743|malate transport	GO:0005253|anion channel activity	GO:0009705|plant-type vacuole membrane
pt2_01024	A	A1S	Potri.001G097200	Potri.001G097200(AS)	POPTR_0001s10090	sp|Q9SZ67|WRK19_ARATH	Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1	AT1G64140.1	| Symbols: | BEST Arabidopsis thaliana protein match is: loricrin-related (TAIR:AT5G64550.1); Has 3596 Blast hits to 2004 proteins in 150 species: Archae - 0; Bacteria - 54; Metazoa - 1597; Fungi - 38; Plants - 513; Viruses - 9; Other Eukaryotes - 1385 (source: NCBI BLink). | chr1:23804069-23806009 REVERSE LENGTH=646	LOC_Os01g43372.1	protein|expressed protein	IMGA|contig_83807_1.1	Unknown protein contig_83807 2620-1 E PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_01025	A	A1S	Potri.001G097100	Potri.001G097100(AS)	POPTR_0001s10100	NA	NA	NA	NA	NA	NA	NA	NA	GO:0042631|cellular response to water deprivation	NA	GO:0009507|chloroplast GO:0016020|membrane
pt2_01026	A	A1S	Potri.001G097000	Potri.001G097000(AS)	POPTR_0001s10110	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01027	A	A1S	Potri.001G096900	Potri.001G096900(AS)	POPTR_0001s10120	sp|P13240|DR206_PEA	Disease resistance response protein 206 OS=Pisum sativum GN=PI206 PE=2 SV=2	AT4G23690.1	| Symbols: | Disease resistance-responsive (dirigent-like protein) family protein | chr4:12339152-12339715 REVERSE LENGTH=187	LOC_Os07g44930.1	protein|dirigent, putative, expressed	NA	NA	GO:0006084|acetyl-CoA metabolic process GO:0006952|defense response GO:0009807|lignan biosynthetic process GO:0016126|sterol biosynthetic process GO:0016132|brassinosteroid biosynthetic process GO:0050790|regulation of catalytic activity GO:1901599|(-)-pinoresinol biosynthetic process	GO:0042349|guiding stereospecific synthesis activity	GO:0005576|extracellular region
pt2_01028	A	A3S	Potri.001G096800	Potri.001G096800(AS) Potri.003G134600(DS) Potri.001G096600(DS)	POPTR_0001s10130	sp|P13240|DR206_PEA	Disease resistance response protein 206 OS=Pisum sativum GN=PI206 PE=2 SV=2	AT1G64160.1	| Symbols: | Disease resistance-responsive (dirigent-like protein) family protein | chr1:23814063-23814611 FORWARD LENGTH=182	LOC_Os07g44250.1	protein|dirigent, putative, expressed	NA	NA	GO:0006952|defense response GO:0009807|lignan biosynthetic process GO:1901599|(-)-pinoresinol biosynthetic process	GO:0042349|guiding stereospecific synthesis activity	GO:0005576|extracellular region
pt2_01029	C	C1S	Potri.001G096700	Potri.001G096700(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01030	A	A2S	Potri.001G096600	Potri.001G096600(AS) Potri.001G096800(DS)	POPTR_0001s10150	sp|P13240|DR206_PEA	Disease resistance response protein 206 OS=Pisum sativum GN=PI206 PE=2 SV=2	AT1G64160.1	| Symbols: | Disease resistance-responsive (dirigent-like protein) family protein | chr1:23814063-23814611 FORWARD LENGTH=182	LOC_Os07g44280.1	protein|dirigent, putative, expressed	NA	NA	GO:0006952|defense response GO:0009807|lignan biosynthetic process GO:1901599|(-)-pinoresinol biosynthetic process	GO:0042349|guiding stereospecific synthesis activity	GO:0005576|extracellular region
pt2_01031	A	A1S	Potri.001G096500	Potri.001G096500(AS)	POPTR_0001s10160	sp|P13240|DR206_PEA	Disease resistance response protein 206 OS=Pisum sativum GN=PI206 PE=2 SV=2	AT1G64160.1	| Symbols: | Disease resistance-responsive (dirigent-like protein) family protein | chr1:23814063-23814611 FORWARD LENGTH=182	LOC_Os07g44930.1	protein|dirigent, putative, expressed	NA	NA	GO:0006952|defense response GO:0009807|lignan biosynthetic process GO:1901599|(-)-pinoresinol biosynthetic process	GO:0042349|guiding stereospecific synthesis activity	GO:0005576|extracellular region
pt2_01032	G	G1	NA	NA	POPTR_0001s10165	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01033	A	A1S	Potri.001G096400	Potri.001G096400(AS)	POPTR_0001s10170	sp|Q9FFR9|CHX18_ARATH	Cation/H(+) antiporter 18 OS=Arabidopsis thaliana GN=CHX18 PE=2 SV=1	AT5G41610.1	| Symbols: ATCHX18, CHX18 | cation/H+ exchanger 18 | chr5:16638554-16641146 REVERSE LENGTH=810	LOC_Os05g19500.1	protein|ATCHX, putative, expressed	IMGA|Medtr5g009770.1	Na+/H+ antiporter-like protein chr5 2205905-2209473 E EGN_Mt100125 20111014	GO:0006812|cation transport GO:0006885|regulation of pH GO:0035725|sodium ion transmembrane transport GO:0055085|transmembrane transport	GO:0005451|monovalent cation:hydrogen antiporter activity GO:0015299|solute:hydrogen antiporter activity GO:0015385|sodium:hydrogen antiporter activity	GO:0005770|late endosome GO:0009507|chloroplast GO:0016021|integral to membrane
pt2_01034	A	A1S	Potri.001G096200	Potri.001G096200(AS)	POPTR_0001s10180	sp|Q66GQ2|Y5162_ARATH	Uncharacterized protein At5g41620 OS=Arabidopsis thaliana GN=At5g41620 PE=1 SV=2	AT5G41620.1	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: intracellular protein transport protein USO1-related (TAIR:AT1G64180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:16646330-16648776 FORWARD LENGTH=623	LOC_Os06g31190.1	protein|intracellular protein transport protein USO1-related, putative, expressed	IMGA|Medtr5g009750.1	hypothetical protein chr5 2200925-2197271 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005737|cytoplasm GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_01035	A	A1S	Potri.001G096100	Potri.001G096100(AS)	POPTR_0001s10190	sp|Q9FPW6|POB1_ARATH	BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana GN=POB1 PE=2 SV=2	AT3G61600.2	| Symbols: ATPOB1, POB1 | POZ/BTB containin G-protein 1 | chr3:22795704-22798069 FORWARD LENGTH=561	LOC_Os06g31100.1	protein|E1-BTB2 - Bric-a-Brac, Tramtrack, and Broad Complex domain with E1 subfamily conserved sequence, expressed	NA	NA	GO:0009954|proximal/distal pattern formation GO:0010114|response to red light GO:0010227|floral organ abscission GO:0048439|flower morphogenesis	GO:0005515|protein binding GO:0042803|protein homodimerization activity GO:0046982|protein heterodimerization activity	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_01036	A	A1S	Potri.001G096000	Potri.001G096000(AS)	POPTR_0001s10200	NA	NA	AT4G23720.1	| Symbols: | Protein of unknown function (DUF1191) | chr4:12358707-12359648 FORWARD LENGTH=313	LOC_Os12g02550.1	protein|expressed protein	IMGA|Medtr5g075750.1	hypothetical protein chr5 31232635-31231727 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005886|plasma membrane
pt2_01037	A	A1S	Potri.001G095900	Potri.001G095900(AS)	POPTR_0001s10210	sp|Q9ZP55|DRP4C_ARATH	Dynamin-related protein 4C OS=Arabidopsis thaliana GN=DRP4C PE=2 SV=1	AT1G60500.1	| Symbols: DRP4C | Dynamin related protein 4C | chr1:22291582-22293822 FORWARD LENGTH=669	LOC_Os03g15420.1	protein|dynamin family protein, putative, expressed	IMGA|Medtr5g009150.1	Dynamin-related protein 1A chr5 1886432-1881144 H EGN_Mt100125 20111014	NA	GO:0003924|GTPase activity GO:0005525|GTP binding	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_01038	A	A2S	Potri.001G095800	Potri.001G095800(AS) Potri.003G135600(DS)	POPTR_0001s10220	sp|P21577|6PGD_SYNE7	6-phosphogluconate dehydrogenase, decarboxylating OS=Synechococcus elongatus (strain PCC 7942) GN=gnd PE=1 SV=4	AT5G41670.2	| Symbols: | 6-phosphogluconate dehydrogenase family protein | chr5:16665647-16667110 REVERSE LENGTH=487	LOC_Os11g29400.1	protein|6-phosphogluconate dehydrogenase, decarboxylating, putative, expressed	IMGA|contig_75082_1.1	6-phosphogluconate dehydrogenase decarboxylating contig_75082 2874-966 F PREDN 20111014	GO:0006098|pentose-phosphate shunt GO:0009744|response to sucrose stimulus GO:0009749|response to glucose stimulus GO:0009750|response to fructose stimulus GO:0046686|response to cadmium ion GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0004616|phosphogluconate dehydrogenase (decarboxylating) activity GO:0016491|oxidoreductase activity GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0050661|NADP binding GO:0050662|coenzyme binding	GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0005829|cytosol GO:0009506|plasmodesma GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_01039	A	A2S	Potri.001G095700	Potri.001G095700(AS) Potri.001G095600(DS)	POPTR_0001s10230	sp|Q9LYS2|AB10C_ARATH	ABC transporter C family member 10 OS=Arabidopsis thaliana GN=ABCC10 PE=2 SV=2	AT3G59140.1	| Symbols: ATMRP14, MRP14, ABCC10 | multidrug resistance-associated protein 14 | chr3:21863519-21868701 REVERSE LENGTH=1453	LOC_Os06g06440.1	protein|ABC transporter, ATP-binding protein, putative, expressed	IMGA|contig_107110_1.1	Multidrug resistance protein ABC transporter family contig_107110 1-491 H PREDN 20111014	GO:0006810|transport GO:0055085|transmembrane transport	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0005774|vacuolar membrane GO:0005886|plasma membrane GO:0016021|integral to membrane
pt2_01040	A	A1S	Potri.001G095600	Potri.001G095600(AS)	POPTR_0001s10240	sp|Q9LYS2|AB10C_ARATH	ABC transporter C family member 10 OS=Arabidopsis thaliana GN=ABCC10 PE=2 SV=2	AT3G59140.1	| Symbols: ATMRP14, MRP14, ABCC10 | multidrug resistance-associated protein 14 | chr3:21863519-21868701 REVERSE LENGTH=1453	LOC_Os06g06440.1	protein|ABC transporter, ATP-binding protein, putative, expressed	IMGA|Medtr5g033030.1	Multidrug resistance protein ABC transporter family chr5 13816774-13810624 H EGN_Mt100125 20111014	GO:0006810|transport GO:0055085|transmembrane transport	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0005774|vacuolar membrane GO:0005886|plasma membrane GO:0016021|integral to membrane
pt2_01041	A	A1S	Potri.001G095500	Potri.001G095500(AS)	POPTR_0001s10250	sp|A9HF18|IF2_GLUDA	Translation initiation factor IF-2 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=infB PE=3 SV=1	AT4G11160.1	| Symbols: | Translation initiation factor 2, small GTP-binding protein | chr4:6803846-6806726 FORWARD LENGTH=743	LOC_Os09g34010.1	protein|expressed protein	IMGA|Medtr5g032140.1	Translation initiation factor IF-2 chr5 13379160-13374048 E EGN_Mt100125 20111014	GO:0006413|translational initiation GO:0009165|nucleotide biosynthetic process GO:0009887|organ morphogenesis GO:0009888|tissue development GO:0010228|vegetative to reproductive phase transition of meristem GO:0010638|positive regulation of organelle organization GO:0016926|protein desumoylation GO:0033044|regulation of chromosome organization GO:0050665|hydrogen peroxide biosynthetic process	GO:0003743|translation initiation factor activity GO:0003924|GTPase activity GO:0005525|GTP binding	GO:0005622|intracellular
pt2_01042	G	G1	NA	NA	POPTR_0001s10260	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01043	A	A1S	Potri.001G095300	Potri.001G095300(AS)	POPTR_0001s10270	sp|Q40784|AAPC_CENCI	Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris PE=2 SV=1	AT3G61610.1	| Symbols: | Galactose mutarotase-like superfamily protein | chr3:22799480-22801029 FORWARD LENGTH=317	LOC_Os05g49430.1	protein|aldose 1-epimerase, putative, expressed	IMGA|Medtr5g009670.1	Apospory-associated protein C chr5 2153652-2151588 F EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0006012|galactose metabolic process GO:0006499|N-terminal protein myristoylation	GO:0003824|catalytic activity GO:0004034|aldose 1-epimerase activity GO:0016853|isomerase activity GO:0030246|carbohydrate binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01044	A	A1S	Potri.001G095200	Potri.001G095200(AS)	POPTR_0001s10280	sp|Q9SUQ3|Y4374_ARATH	Probable inactive receptor kinase At4g23740 OS=Arabidopsis thaliana GN=At4g23740 PE=1 SV=1	AT4G23740.1	| Symbols: | Leucine-rich repeat protein kinase family protein | chr4:12367063-12369159 FORWARD LENGTH=638	LOC_Os01g12390.1	protein|inactive receptor kinase At2g26730 precursor, putative, expressed	IMGA|contig_49154_1.1	Receptor kinase contig_49154 3957-1323 E PREDN 20111014	GO:0006468|protein phosphorylation GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway GO:0010075|regulation of meristem growth	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_01045	A	A2S	Potri.001G094900	Potri.001G094900(AS) Potri.003G136200(DS)	POPTR_0001s10290	sp|P35135|UBC4_SOLLC	Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1	AT1G64230.2	| Symbols: UBC28 | ubiquitin-conjugating enzyme 28 | chr1:23833792-23835220 FORWARD LENGTH=148	LOC_Os02g16040.1	protein|ubiquitin-conjugating enzyme, putative, expressed	IMGA|Medtr5g075580.1	Ubiquitin carrier protein chr5 31157779-31152864 E EGN_Mt100125 20111014	GO:0006301|postreplication repair GO:0006511|ubiquitin-dependent protein catabolic process GO:0006635|fatty acid beta-oxidation GO:0006944|cellular membrane fusion GO:0016558|protein import into peroxisome matrix GO:0042023|DNA endoreduplication GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0043248|proteasome assembly GO:0044265|cellular macromolecule catabolic process GO:0048193|Golgi vesicle transport GO:0051510|regulation of unidimensional cell growth GO:0051788|response to misfolded protein	GO:0004842|ubiquitin-protein ligase activity GO:0016881|acid-amino acid ligase activity	GO:0005737|cytoplasm GO:0005886|plasma membrane
pt2_01046	A	A2S	Potri.001G094800	Potri.001G094800(AS) Potri.003G136300(DS)	POPTR_0001s10300	sp|Q9SUQ2|CRF2_ARATH	Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE=1 SV=1	AT4G23750.2	| Symbols: CRF2, TMO3 | cytokinin response factor 2 | chr4:12376751-12377782 FORWARD LENGTH=343	LOC_Os01g46870.1	protein|AP2 domain containing protein, expressed	IMGA|Medtr5g009620.1	Ethylene-responsive transcription factor RAP2-6 chr5 2125011-2123721 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006606|protein import into nucleus GO:0042991|transcription factor import into nucleus GO:0048364|root development GO:0048825|cotyledon development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0042802|identical protein binding	GO:0005634|nucleus
pt2_01047	A	A1S	Potri.001G094700	Potri.001G094700(AS)	POPTR_0001s10310	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process GO:0009612|response to mechanical stimulus	NA	GO:0005886|plasma membrane GO:0031225|anchored to membrane
pt2_01048	A	A1S	Potri.001G094600	Potri.001G094600(AS)	POPTR_0001s10320	sp|Q8LGE9|CSTR1_ARATH	CMP-sialic acid transporter 1 OS=Arabidopsis thaliana GN=At5g41760 PE=2 SV=1	AT5G41760.2	| Symbols: | Nucleotide-sugar transporter family protein | chr5:16706978-16709204 FORWARD LENGTH=340	LOC_Os06g33210.1	protein|UAA transporter family domain containing protein, expressed	IMGA|Medtr5g099280.1	UDP-N-acetylglucosamine transporter chr5 42487897-42492640 F EGN_Mt100125 20111014	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0009086|methionine biosynthetic process GO:0015739|sialic acid transport GO:0015780|nucleotide-sugar transport GO:0055085|transmembrane transport	GO:0005338|nucleotide-sugar transmembrane transporter activity GO:0005351|sugar:hydrogen symporter activity GO:0005456|CMP-N-acetylneuraminate transmembrane transporter activity GO:0015136|sialic acid transmembrane transporter activity	GO:0000139|Golgi membrane GO:0009507|chloroplast GO:0016021|integral to membrane
pt2_01049	A	A1S	Potri.001G094500	Potri.001G094500(AS)	POPTR_0001s10330	sp|Q9T014|SPA2_ARATH	Protein SPA1-RELATED 2 OS=Arabidopsis thaliana GN=SPA2 PE=1 SV=2	AT4G11110.1	| Symbols: SPA2 | SPA1-related 2 | chr4:6772163-6776675 FORWARD LENGTH=1036	LOC_Os05g49590.2	protein|suppressor of phythchrome A, putative, expressed	IMGA|Medtr5g009530.1	Histone acetyltransferase type B subunit chr5 2065539-2079439 H EGN_Mt100125 20111014	GO:0006281|DNA repair GO:0006468|protein phosphorylation GO:0010100|negative regulation of photomorphogenesis GO:0048608|reproductive structure development	GO:0004672|protein kinase activity GO:0004871|signal transducer activity GO:0005515|protein binding GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus GO:0005834|heterotrimeric G-protein complex GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_01050	A	A1S	Potri.001G094400	Potri.001G094400(AS)	POPTR_0001s10340	sp|P63155|CRNL1_RAT	Crooked neck-like protein 1 OS=Rattus norvegicus GN=Crnkl1 PE=2 SV=1	AT5G41770.1	| Symbols: | crooked neck protein, putative / cell cycle protein, putative | chr5:16718021-16720936 FORWARD LENGTH=705	LOC_Os05g22260.1	protein|crooked neck, putative, expressed	IMGA|Medtr5g009520.1	Pre-mRNA-splicing factor CLF1 chr5 2056724-2050572 E EGN_Mt100125 20111014	GO:0006396|RNA processing	NA	GO:0005622|intracellular GO:0005634|nucleus
pt2_01051	A	A1S	Potri.001G094300	Potri.001G094300(AS)	POPTR_0001s10350	NA	NA	AT1G64320.1	| Symbols: | myosin heavy chain-related | chr1:23869036-23870548 FORWARD LENGTH=476	NA	NA	NA	NA	GO:0009827|plant-type cell wall modification GO:0009860|pollen tube growth GO:0046686|response to cadmium ion	GO:0003674|molecular_function	NA
pt2_01052	C	C1S	Potri.001G094200	Potri.001G094200(CS)	NA	NA	AT5G41790.1	| Symbols: CIP1 | COP1-interactive protein 1 | chr5:16727530-16732391 FORWARD LENGTH=1586	NA	NA	NA	NA	GO:0042306|regulation of protein import into nucleus	GO:0005515|protein binding	GO:0005634|nucleus GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005856|cytoskeleton GO:0009507|chloroplast
pt2_01053	A	A1S	Potri.001G094100	Potri.001G094100(AS)	POPTR_0001s10370	sp|Q54MZ4|MCFB_DICDI	Mitochondrial substrate carrier family protein B OS=Dictyostelium discoideum GN=mcfB PE=3 SV=1	AT4G01100.1	| Symbols: ADNT1 | adenine nucleotide transporter 1 | chr4:477411-479590 FORWARD LENGTH=352	LOC_Os05g50840.1	protein|mitochondrial carrier protein, putative, expressed	IMGA|Medtr5g009500.1	Calcium-binding mitochondrial carrier protein SCaMC-1-B chr5 2040638-2043955 E EGN_Mt100125 20111014	GO:0006007|glucose catabolic process GO:0006096|glycolysis GO:0006098|pentose-phosphate shunt GO:0006810|transport GO:0006839|mitochondrial transport GO:0009060|aerobic respiration GO:0009651|response to salt stress GO:0015866|ADP transport GO:0015867|ATP transport GO:0046686|response to cadmium ion GO:0055085|transmembrane transport GO:0080121|AMP transport	GO:0005347|ATP transmembrane transporter activity GO:0015217|ADP transmembrane transporter activity GO:0080122|AMP transmembrane transporter activity	GO:0005739|mitochondrion GO:0005743|mitochondrial inner membrane GO:0005774|vacuolar membrane GO:0009536|plastid GO:0016020|membrane
pt2_01054	A	A1S	Potri.001G094000	Potri.001G094000(AS)	POPTR_0001s10380	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01055	A	A1S	Potri.001G093900	Potri.001G093900(AS)	POPTR_0001s10390	NA	NA	AT3G61670.1	| Symbols: | Protein of unknown function (DUF3133) | chr3:22819052-22821870 FORWARD LENGTH=790	LOC_Os02g15820.1	protein|extra-large G-protein-related, putative, expressed	IMGA|contig_74055_1.1	Extra-large G-protein-like protein contig_74055 261-4678 E PREDN 20111014	GO:0006346|methylation-dependent chromatin silencing GO:0007267|cell-cell signaling GO:0008150|biological_process GO:0009616|virus induced gene silencing GO:0010050|vegetative phase change GO:0010267|production of ta-siRNAs involved in RNA interference GO:0016246|RNA interference GO:0035196|production of miRNAs involved in gene silencing by miRNA	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_01056	A	A2S	Potri.001G093800	Potri.001G093800(AS) Potri.003G137800(DS)	POPTR_0001s10400	NA	NA	AT4G11090.1	| Symbols: TBL23 | TRICHOME BIREFRINGENCE-LIKE 23 | chr4:6764645-6766221 REVERSE LENGTH=432	LOC_Os05g12380.1	protein|expressed protein	IMGA|contig_53322_2.1	Leaf senescence protein-like protein contig_53322 4450-3428 H PREDN 20111014	GO:0008150|biological_process	NA	NA
pt2_01057	A	A1S	Potri.001G093700	Potri.001G093700(AS)	POPTR_0001s10410	sp|Q9T012|HMG13_ARATH	High mobility group B protein 13 OS=Arabidopsis thaliana GN=HMGB13 PE=2 SV=1	AT4G11080.1	| Symbols: | HMG (high mobility group) box protein | chr4:6760898-6763272 REVERSE LENGTH=446	LOC_Os02g15810.1	protein|HMG1/2, putative, expressed	NA	NA	NA	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0000793|condensed chromosome GO:0000794|condensed nuclear chromosome GO:0005634|nucleus
pt2_01058	A	A2S	Potri.001G093600	Potri.001G093600(AS) Potri.003G138100(DS)	POPTR_0001s10430	sp|Q9FKS8|LHT1_ARATH	Lysine histidine transporter 1 OS=Arabidopsis thaliana GN=LHT1 PE=1 SV=1	AT5G41800.1	| Symbols: | Transmembrane amino acid transporter family protein | chr5:16733842-16735888 FORWARD LENGTH=452	LOC_Os01g43320.1	protein|transmembrane amino acid transporter protein, putative, expressed	IMGA|Medtr5g081630.1	Proline transporter chr5 33955507-33967822 E EGN_Mt100125 20111014	GO:0006865|amino acid transport GO:0015824|proline transport	GO:0015171|amino acid transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_01059	A	A1S	Potri.001G093500	Potri.001G093500(AS)	POPTR_0001s10440	NA	NA	AT5G41810.2	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64340.1); Has 514 Blast hits to 437 proteins in 98 species: Archae - 0; Bacteria - 21; Metazoa - 115; Fungi - 53; Plants - 52; Viruses - 5; Other Eukaryotes - 268 (source: NCBI BLink). | chr5:16738302-16739474 FORWARD LENGTH=279	LOC_Os06g33390.1	protein|avr9/Cf-9 rapidly elicited protein 194, putative, expressed	IMGA|Medtr5g009490.1	hypothetical protein chr5 2036837-2036262 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01060	A	A1S	Potri.001G093400	Potri.001G093400(AS)	POPTR_0001s10450	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006626|protein targeting to mitochondrion GO:0006635|fatty acid beta-oxidation GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0043248|proteasome assembly GO:0051788|response to misfolded protein	GO:0000166|nucleotide binding GO:0005515|protein binding	GO:0005635|nuclear envelope GO:0005737|cytoplasm GO:0005834|heterotrimeric G-protein complex
pt2_01061	R	R	NA	NA	POPTR_0001s10460	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01062	A	A2S	Potri.001G093200	Potri.001G093200(AS) Potri.010G227200(DS)	POPTR_0001s10470	NA	NA	NA	NA	NA	NA	NA	NA	GO:0009851|auxin biosynthetic process GO:0009911|positive regulation of flower development GO:0010228|vegetative to reproductive phase transition of meristem GO:0010229|inflorescence development GO:0016575|histone deacetylation GO:0048825|cotyledon development GO:0055114|oxidation-reduction process	GO:0008131|primary amine oxidase activity GO:0016491|oxidoreductase activity	GO:0005739|mitochondrion
pt2_01063	B	B1S	Potri.001G093000	Potri.001G093000(BS)	POPTR_0001s10480	NA	NA	AT1G64355.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3593 (InterPro:IPR021995); Has 301 Blast hits to 301 proteins in 96 species: Archae - 0; Bacteria - 143; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). | chr1:23886152-23886987 FORWARD LENGTH=199	LOC_Os05g49650.1	protein|expressed protein	NA	NA	GO:0008150|biological_process GO:0010207|photosystem II assembly	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_01064	A	A1S	Potri.001G092900	Potri.001G092900(AS)	POPTR_0001s10490	sp|Q8H0Y8|WRK41_ARATH	Probable WRKY transcription factor 41 OS=Arabidopsis thaliana GN=WRKY41 PE=2 SV=2	AT4G11070.1	| Symbols: WRKY41, AtWRKY41 | WRKY family transcription factor | chr4:6759303-6760763 FORWARD LENGTH=313	LOC_Os08g29660.1	protein|WRKY69, expressed	IMGA|Medtr5g067680.1	WRKY transcription factor-30 chr5 27618450-27622967 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_01065	A	A1S	Potri.001G092800	Potri.001G092800(AS)	POPTR_0001s10500	NA	NA	AT5G41850.1	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr5:16756698-16757791 REVERSE LENGTH=224	LOC_Os05g12330.1	protein|uncharacterized protein KIAA1310, putative, expressed	NA	NA	GO:0008152|metabolic process	GO:0016787|hydrolase activity	GO:0005575|cellular_component
pt2_01066	A	A1S	Potri.001G092700	Potri.001G092700(AS)	POPTR_0001s10510	NA	NA	NA	NA	LOC_Os01g12110.2	protein|expressed protein	IMGA|contig_20851_1.1	Unknown protein contig_20851 193-515 H PREDN 20111014	GO:0006508|proteolysis GO:0008152|metabolic process GO:0043086|negative regulation of catalytic activity	GO:0004252|serine-type endopeptidase activity GO:0008236|serine-type peptidase activity GO:0042802|identical protein binding	GO:0005576|extracellular region GO:0005618|cell wall GO:0016020|membrane GO:0048196|plant extracellular matrix
pt2_01067	A	A1S	Potri.001G092600	Potri.001G092600(AS)	POPTR_0001s10520	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_01068	A	A1S	Potri.001G092500	Potri.001G092500(AS)	POPTR_0001s10530	sp|Q9FGM1|PYL8_ARATH	Abscisic acid receptor PYL8 OS=Arabidopsis thaliana GN=PYL8 PE=1 SV=1	AT5G53160.2	| Symbols: RCAR3, PYL8 | regulatory components of ABA receptor 3 | chr5:21561026-21561953 FORWARD LENGTH=188	LOC_Os02g15640.1	protein|CAPIP1, putative, expressed	IMGA|Medtr5g083270.1	Abscisic acid receptor PYL6 chr5 34938236-34936695 F EGN_Mt100125 20111014	GO:0006950|response to stress GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009789|positive regulation of abscisic acid mediated signaling pathway	GO:0004872|receptor activity GO:0005515|protein binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005739|mitochondrion
pt2_01069	A	A2S	Potri.001G092400	Potri.001G092400(AS) Potri.003G139300(BS)	POPTR_0001s10540	sp|Q9C7W2|ERF61_ARATH	Ethylene-responsive transcription factor ERF061 OS=Arabidopsis thaliana GN=ERF061 PE=2 SV=1	AT1G64380.1	| Symbols: | Integrase-type DNA-binding superfamily protein | chr1:23890981-23891988 REVERSE LENGTH=335	LOC_Os05g49700.1	protein|AP2 domain containing protein, expressed	IMGA|Medtr5g009410.1	Ethylene-responsive transcription factor ERF061 chr5 2008215-2009542 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0010200|response to chitin GO:0015824|proline transport	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_01070	A	A1S	Potri.001G092300	Potri.001G092300(AS)	POPTR_0001s10550	NA	NA	AT1G64385.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 66 Blast hits to 66 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 4; Plants - 51; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). | chr1:23900309-23901956 FORWARD LENGTH=351	LOC_Os05g49750.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0005829|cytosol
pt2_01071	A	A2S	Potri.001G092200	Potri.001G092200(AS) Potri.001G092100(AA)	POPTR_0001s10560	sp|Q42059|GUN6_ARATH	Endoglucanase 6 OS=Arabidopsis thaliana GN=At1g64390 PE=2 SV=2	AT1G64390.1	| Symbols: AtGH9C2, GH9C2 | glycosyl hydrolase 9C2 | chr1:23911329-23914642 FORWARD LENGTH=620	LOC_Os01g12070.1	protein|endoglucanase precursor, putative, expressed	IMGA|Medtr5g085730.1	Endoglucanase chr5 36028973-36032829 E EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0030246|carbohydrate binding	GO:0005576|extracellular region
pt2_01072	A	A1S	Potri.001G092100	Potri.001G092100(AS)	POPTR_0001s10570	sp|Q5SN75|P2C08_ORYSJ	Probable protein phosphatase 2C 8 OS=Oryza sativa subsp. japonica GN=Os01g0656200 PE=2 SV=1	AT1G07430.1	| Symbols: HAI2 | highly ABA-induced PP2C gene 2 | chr1:2281151-2282656 REVERSE LENGTH=442	LOC_Os01g46760.1	protein|protein phosphatase 2C, putative, expressed	IMGA|Medtr5g009370.1	Protein phosphatase 2C chr5 1985761-1987219 E EGN_Mt100125 20111014	GO:0006470|protein dephosphorylation	GO:0003824|catalytic activity GO:0004722|protein serine/threonine phosphatase activity	GO:0005886|plasma membrane GO:0008287|protein serine/threonine phosphatase complex
pt2_01073	A	A1S	Potri.001G092000	Potri.001G092000(AS)	POPTR_0001s10580	NA	NA	AT4G23840.1	| Symbols: | Leucine-rich repeat (LRR) family protein | chr4:12400379-12403190 FORWARD LENGTH=597	LOC_Os05g12140.1	protein|Leucine Rich Repeat family protein, expressed	NA	NA	NA	NA	GO:0005575|cellular_component
pt2_01074	A	A1S	Potri.001G091900	Potri.001G091900(AS)	POPTR_0001s10590	sp|Q9T0A0|LACS4_ARATH	Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana GN=LACS4 PE=2 SV=1	AT4G23850.1	| Symbols: LACS4 | AMP-dependent synthetase and ligase family protein | chr4:12403720-12408263 REVERSE LENGTH=666	LOC_Os01g46750.1	protein|AMP-binding enzyme, putative, expressed	IMGA|Medtr5g009350.1	Long-chain-fatty-acid-CoA ligase chr5 1961227-1970077 F EGN_Mt100125 20111014	GO:0001676|long-chain fatty acid metabolic process GO:0002213|defense response to insect GO:0006631|fatty acid metabolic process GO:0006633|fatty acid biosynthetic process GO:0009611|response to wounding GO:0009805|coumarin biosynthetic process	GO:0003824|catalytic activity GO:0004467|long-chain fatty acid-CoA ligase activity	GO:0005634|nucleus GO:0005794|Golgi apparatus GO:0005886|plasma membrane
pt2_01075	A	A1S	Potri.001G091800	Potri.001G091800(AS)	POPTR_0001s10600	sp|Q42191|OXA1_ARATH	Mitochondrial inner membrane protein OXA1 OS=Arabidopsis thaliana GN=OXA1 PE=2 SV=2	AT5G62050.1	| Symbols: OXA1, ATOXA1, OXA1AT | homolog of yeast oxidase assembly 1 (OXA1) | chr5:24924062-24926758 REVERSE LENGTH=429	LOC_Os10g37690.1	protein|inner membrane protein, putative, expressed	NA	NA	GO:0006461|protein complex assembly GO:0006626|protein targeting to mitochondrion GO:0045039|protein import into mitochondrial inner membrane GO:0051205|protein insertion into membrane	GO:0015450|P-P-bond-hydrolysis-driven protein transmembrane transporter activity	GO:0005739|mitochondrion GO:0005743|mitochondrial inner membrane GO:0016020|membrane
pt2_01076	A	A1S	Potri.001G091700	Potri.001G091700(AS)	POPTR_0001s10610	sp|P0CH01|AT21A_ARATH	Putative RING-H2 finger protein ATL21A OS=Arabidopsis thaliana GN=ATL21A PE=3 SV=1	AT5G53110.1	| Symbols: | RING/U-box superfamily protein | chr5:21529022-21533008 FORWARD LENGTH=382	LOC_Os12g04130.1	protein|OsFBO23 - F-box and other domain containing protein, expressed	IMGA|Medtr5g009200.1	RING finger protein chr5 1909541-1908258 H EGN_Mt100125 20111014	GO:0006865|amino acid transport GO:0008150|biological_process	GO:0008270|zinc ion binding	NA
pt2_01077	A	A1S	Potri.001G091600	Potri.001G091600(AS)	POPTR_0001s10620	sp|Q8BU04|UBR7_MOUSE	Putative E3 ubiquitin-protein ligase UBR7 OS=Mus musculus GN=Ubr7 PE=2 SV=1	AT4G23860.3	| Symbols: | PHD finger protein-related | chr4:12409336-12411336 FORWARD LENGTH=452	LOC_Os06g33810.1	protein|zinc finger protein, putative, expressed	IMGA|Medtr5g009240.1	PHD finger-related protein chr5 1923878-1928665 E EGN_Mt100125 20111014	GO:0006261|DNA-dependent DNA replication	GO:0004842|ubiquitin-protein ligase activity GO:0008270|zinc ion binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_01078	A	A2S	Potri.001G091500	Potri.001G091500(AS) Potri.003G140100(DS)	POPTR_0001s10630	NA	NA	NA	NA	NA	NA	IMGA|Medtr5g009260.1	hypothetical protein chr5 1934783-1935440 F EGN_Mt100125 20111014	GO:0010227|floral organ abscission	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01079	B	B1S	Potri.001G091400	Potri.001G091400(BS)	POPTR_0001s10640	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01080	A	A1S	Potri.001G091300	Potri.001G091300(AS)	POPTR_0001s10650	NA	NA	AT4G23890.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3252 (InterPro:IPR021659); Has 287 Blast hits to 287 proteins in 81 species: Archae - 0; Bacteria - 118; Metazoa - 12; Fungi - 6; Plants - 40; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). | chr4:12420593-12421345 REVERSE LENGTH=250	LOC_Os07g09800.1	protein|expressed protein	NA	NA	GO:0008150|biological_process GO:0009637|response to blue light GO:0010155|regulation of proton transport GO:0030003|cellular cation homeostasis GO:0046777|protein autophosphorylation GO:0070838|divalent metal ion transport	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane
pt2_01081	A	A1S	Potri.001G091100	Potri.001G091100(AS)	POPTR_0001s10660	NA	NA	AT4G23895.2	| Symbols: | Pleckstrin homology (PH) domain-containing protein | chr4:12422883-12424146 FORWARD LENGTH=247	LOC_Os05g51710.1	protein|pleckstrin homology domain-containing protein-related taxo, putative, expressed	IMGA|Medtr5g009310.1	hypothetical protein chr5 1946465-1948403 F EGN_Mt100125 20111014	GO:0006165|nucleoside diphosphate phosphorylation GO:0006183|GTP biosynthetic process GO:0006228|UTP biosynthetic process GO:0006241|CTP biosynthetic process	GO:0004550|nucleoside diphosphate kinase activity GO:0005524|ATP binding GO:0005543|phospholipid binding	GO:0005575|cellular_component GO:0005634|nucleus GO:0009507|chloroplast
pt2_01082	A	A1S	Potri.001G091000	Potri.001G091000(AS)	POPTR_0001s10670	sp|O49203|NDK3_ARATH	Nucleoside diphosphate kinase III, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=NDPK3 PE=1 SV=1	AT4G11010.1	| Symbols: NDPK3 | nucleoside diphosphate kinase 3 | chr4:6732780-6734298 REVERSE LENGTH=238	LOC_Os05g51700.3	protein|nucleoside diphosphate kinase, putative, expressed	NA	NA	GO:0006165|nucleoside diphosphate phosphorylation GO:0006183|GTP biosynthetic process GO:0006228|UTP biosynthetic process GO:0006241|CTP biosynthetic process	GO:0004550|nucleoside diphosphate kinase activity GO:0005524|ATP binding GO:0005543|phospholipid binding	GO:0005575|cellular_component GO:0005634|nucleus GO:0009507|chloroplast
pt2_01083	A	A1S	Potri.001G090900	Potri.001G090900(AS)	POPTR_0001s10680	NA	NA	AT4G10970.4	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23910.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:6719718-6721885 REVERSE LENGTH=217	LOC_Os08g28690.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005739|mitochondrion
pt2_01084	A	A1S	Potri.001G090800	Potri.001G090800(AS)	POPTR_0001s10690	NA	NA	AT1G64430.2	| Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:23933541-23936336 FORWARD LENGTH=559	LOC_Os08g24390.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_01085	A	A1S	Potri.001G090700	Potri.001G090700(AS)	POPTR_0001s10700	sp|O65781|GALE2_CYATE	UDP-glucose 4-epimerase GEPI48 OS=Cyamopsis tetragonoloba PE=2 SV=1	AT4G10960.1	| Symbols: UGE5 | UDP-D-glucose/UDP-D-galactose 4-epimerase 5 | chr4:6716083-6718472 REVERSE LENGTH=351	LOC_Os05g51670.1	protein|NAD dependent epimerase/dehydratase family protein, putative, expressed	IMGA|Medtr5g009170.1	UDP-glucose 4-epimerase chr5 1896587-1893288 F EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0006012|galactose metabolic process GO:0006950|response to stress GO:0044237|cellular metabolic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0003978|UDP-glucose 4-epimerase activity GO:0016857|racemase and epimerase activity, acting on carbohydrates and derivatives GO:0046983|protein dimerization activity GO:0050662|coenzyme binding	GO:0005794|Golgi apparatus GO:0005829|cytosol GO:0005886|plasma membrane
pt2_01086	A	A1S	Potri.001G090600	Potri.001G090600(AS)	POPTR_0001s10710	sp|Q39828|SDL5A_SOYBN	Dynamin-related protein 5A OS=Glycine max PE=2 SV=1	AT5G42080.1	| Symbols: ADL1, ADL1A, AG68, DRP1A, RSW9, DL1 | dynamin-like protein | chr5:16820661-16824536 REVERSE LENGTH=610	LOC_Os05g48240.1	protein|dynamin family protein, putative, expressed	IMGA|Medtr5g009150.1	Dynamin-related protein 1A chr5 1886432-1881144 H EGN_Mt100125 20111014	GO:0009793|embryo development ending in seed dormancy GO:0009920|cell plate formation involved in plant-type cell wall biogenesis GO:0010051|xylem and phloem pattern formation GO:0010091|trichome branching GO:0032880|regulation of protein localization GO:0072583|clathrin-mediated endocytosis	GO:0003924|GTPase activity GO:0005515|protein binding GO:0005525|GTP binding GO:0030276|clathrin binding GO:0043424|protein histidine kinase binding	GO:0005737|cytoplasm GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005829|cytosol GO:0005874|microtubule GO:0005886|plasma membrane GO:0009504|cell plate GO:0009506|plasmodesma GO:0009535|chloroplast thylakoid membrane GO:0045334|clathrin-coated endocytic vesicle
pt2_01087	A	A1S	Potri.001G090500	Potri.001G090500(AS)	POPTR_0001s10720	sp|Q680C0|GDL62_ARATH	GDSL esterase/lipase At4g10955 OS=Arabidopsis thaliana GN=At4g10955 PE=2 SV=1	AT4G10955.2	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr4:6713778-6715372 REVERSE LENGTH=350	LOC_Os02g18480.1	protein|lipase class 3 family protein, putative, expressed	IMGA|Medtr5g028370.1	GDSL esterase/lipase chr5 11627059-11625249 H EGN_Mt100125 20111014	GO:0006629|lipid metabolic process	GO:0004806|triglyceride lipase activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01088	G	G1	NA	NA	POPTR_0001s10730	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01089	A	A1S	Potri.001G090300	Potri.001G090300(AS)	POPTR_0001s10740	sp|Q9C671|P4K2B_ARATH	Probable phosphatidylinositol 4-kinase type 2-beta At1g26270 OS=Arabidopsis thaliana GN=At1g26270 PE=1 SV=1	AT2G46500.2	| Symbols: ATPI4K GAMMA 4, UBDK GAMMA 4, PI4K GAMMA 4 | phosphoinositide 4-kinase gamma 4 | chr2:19086741-19088534 REVERSE LENGTH=566	LOC_Os05g51230.1	protein|phosphatidylinositol 3- and 4-kinase family protein, putative, expressed	IMGA|Medtr5g009120.1	Phosphatidylinositol 4-kinase type 2-beta chr5 1871136-1875092 E EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0002679|respiratory burst involved in defense response GO:0006499|N-terminal protein myristoylation GO:0006612|protein targeting to membrane GO:0006944|cellular membrane fusion GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009605|response to external stimulus GO:0009611|response to wounding GO:0009738|abscisic acid mediated signaling pathway GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010200|response to chitin GO:0010363|regulation of plant-type hypersensitive response GO:0030968|endoplasmic reticulum unfolded protein response GO:0031348|negative regulation of defense response GO:0035556|intracellular signal transduction GO:0042538|hyperosmotic salinity response GO:0043069|negative regulation of programmed cell death GO:0046854|phosphatidylinositol phosphorylation GO:0050832|defense response to fungus	GO:0004430|1-phosphatidylinositol 4-kinase activity GO:0016773|phosphotransferase activity, alcohol group as acceptor	GO:0005829|cytosol GO:0009507|chloroplast
pt2_01090	A	A1S	Potri.001G090200	Potri.001G090200(AS)	POPTR_0001s10750	sp|Q3HRP0|CNBL7_ORYSJ	Calcineurin B-like protein 7 OS=Oryza sativa subsp. japonica GN=CBL7 PE=2 SV=1	AT1G64480.1	| Symbols: CBL8 | calcineurin B-like protein 8 | chr1:23948028-23949751 REVERSE LENGTH=214	LOC_Os02g18880.1	protein|calcineurin B, putative, expressed	IMGA|Medtr5g096420.1	Calcineurin B-like protein chr5 41120501-41124331 F EGN_Mt100125 20111014	GO:0019722|calcium-mediated signaling	GO:0005509|calcium ion binding	GO:0005886|plasma membrane GO:0016020|membrane
pt2_01091	A	A1S	Potri.001G090100	Potri.001G090100(AS)	POPTR_0001s10760	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01092	A	A1S	Potri.001G089900	Potri.001G089900(AS)	POPTR_0001s10770	sp|Q8L7I1|Y4193_ARATH	Uncharacterized protein At4g10930 OS=Arabidopsis thaliana GN=At4g10930 PE=2 SV=1	AT4G10930.1	| Symbols: | unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:6705178-6708846 REVERSE LENGTH=984	LOC_Os12g10700.1	protein|expressed protein	NA	NA	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process	NA	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01093	A	A1S	Potri.001G089800	Potri.001G089800(AS)	POPTR_0001s10780	sp|O78516|FTSH_GUITH	ATP-dependent zinc metalloprotease FtsH OS=Guillardia theta GN=ftsH PE=3 SV=1	AT4G23940.1	| Symbols: | FtsH extracellular protease family | chr4:12437108-12441841 FORWARD LENGTH=946	LOC_Os06g45820.1	protein|OsFtsH2 FtsH protease, homologue of AtFtsH2/8, expressed	IMGA|Medtr5g075340.1	Cell division protease ftsH-like protein chr5 31010140-31015963 H EGN_Mt100125 20111014	GO:0007020|microtubule nucleation GO:0009658|chloroplast organization GO:0010020|chloroplast fission	GO:0000166|nucleotide binding GO:0004222|metalloendopeptidase activity GO:0005524|ATP binding GO:0008237|metallopeptidase activity GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity	GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009536|plastid GO:0009941|chloroplast envelope
pt2_01094	A	A1S	Potri.001G089700	Potri.001G089700(AS)	POPTR_0001s10790	sp|O59729|SLPI_SCHPO	Uncharacterized protein slp1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=slp1 PE=2 SV=1	AT4G23950.1	| Symbols: | Galactose-binding protein | chr4:12442297-12444330 FORWARD LENGTH=561	LOC_Os01g41600.1	protein|Sad1 / UNC-like C-terminal domain containing protein, putative, expressed	IMGA|contig_55446_1.1	Sad1/UNC domain protein contig_55446 4590-1013 H PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0046658|anchored to plasma membrane
pt2_01095	A	A1S	Potri.001G089600	Potri.001G089600(AS)	POPTR_0001s10800	sp|Q93YV9|SKIP8_ARATH	F-box protein SKIP8 OS=Arabidopsis thaliana GN=SKIP8 PE=1 SV=1	AT4G10925.3	| Symbols: | Nuclear transport factor 2 (NTF2) family protein | chr4:6702987-6704283 REVERSE LENGTH=231	LOC_Os01g36940.1	protein|OsFBX13 - F-box domain containing protein, expressed	NA	NA	GO:0006635|fatty acid beta-oxidation GO:0008150|biological_process GO:0016558|protein import into peroxisome matrix GO:0048573|photoperiodism, flowering	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_01096	A	A1S	Potri.001G089500	Potri.001G089500(AS)	POPTR_0001s10810	NA	NA	AT5G42070.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:16819118-16820119 REVERSE LENGTH=164	LOC_Os01g13390.1	protein|expressed protein	NA	NA	GO:0008150|biological_process GO:0009965|leaf morphogenesis GO:0030154|cell differentiation GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003674|molecular_function	GO:0005634|nucleus GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane
pt2_01097	A	A1S	Potri.001G089500	Potri.001G089500(AS)	POPTR_0001s10810	NA	NA	AT5G42070.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:16819118-16820119 REVERSE LENGTH=164	LOC_Os01g13390.1	protein|expressed protein	NA	NA	GO:0008150|biological_process GO:0009965|leaf morphogenesis GO:0030154|cell differentiation GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003674|molecular_function	GO:0005634|nucleus GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane
pt2_01098	A	A1S	Potri.001G089500	Potri.001G089500(AS)	POPTR_0001s10810	NA	NA	AT5G42070.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:16819118-16820119 REVERSE LENGTH=164	LOC_Os01g13390.1	protein|expressed protein	NA	NA	GO:0008150|biological_process GO:0009965|leaf morphogenesis GO:0030154|cell differentiation GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003674|molecular_function	GO:0005634|nucleus GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane
pt2_01099	A	A1S	Potri.001G089400	Potri.001G089400(AS)	POPTR_0001s10820	sp|O65155|KELP_ARATH	RNA polymerase II transcriptional coactivator KELP OS=Arabidopsis thaliana GN=KELP PE=1 SV=1	AT4G10920.2	| Symbols: KELP | transcriptional coactivator p15 (PC4) family protein (KELP) | chr4:6697894-6699103 REVERSE LENGTH=165	LOC_Os01g50960.1	protein|RNA polymerase II transcriptional coactivator KELP, putative, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003713|transcription coactivator activity GO:0005515|protein binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01100	A	A1S	Potri.001G089300	Potri.001G089300(AS)	POPTR_0001s10830	sp|Q9LJD7|COP10_ARATH	Constitutive photomorphogenesis protein 10 OS=Arabidopsis thaliana GN=COP10 PE=1 SV=1	AT3G13550.1	| Symbols: FUS9, EMB144, COP10, CIN4 | Ubiquitin-conjugating enzyme family protein | chr3:4423569-4424797 REVERSE LENGTH=182	LOC_Os07g38940.1	protein|ubiquitin-conjugating enzyme, putative, expressed	IMGA|Medtr5g075580.1	Ubiquitin carrier protein chr5 31157779-31152864 E EGN_Mt100125 20111014	GO:0009640|photomorphogenesis GO:0010099|regulation of photomorphogenesis GO:0010388|cullin deneddylation GO:0042023|DNA endoreduplication GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0043248|proteasome assembly GO:0051510|regulation of unidimensional cell growth GO:0051788|response to misfolded protein	GO:0004842|ubiquitin-protein ligase activity GO:0005515|protein binding GO:0016881|acid-amino acid ligase activity	GO:0005634|nucleus
pt2_01101	A	A1S	Potri.001G089200	Potri.001G089200(AS)	POPTR_0001s10840	sp|Q9SUK9|P2C55_ARATH	Probable protein phosphatase 2C 55 OS=Arabidopsis thaliana GN=At4g16580 PE=2 SV=2	AT4G16580.1	| Symbols: | Protein phosphatase 2C family protein | chr4:9341152-9342555 REVERSE LENGTH=467	LOC_Os03g59470.1	protein|stage II sporulation protein E, putative, expressed	IMGA|Medtr5g019790.1	Mitochondrial catalytic protein chr5 7246834-7244365 F EGN_Mt100125 20111014	NA	GO:0003824|catalytic activity	GO:0005739|mitochondrion
pt2_01102	A	A1S	Potri.001G089100	Potri.001G089100(AS)	POPTR_0001s10850	sp|Q9LXA8|BXL6_ARATH	Probable beta-D-xylosidase 6 OS=Arabidopsis thaliana GN=BXL6 PE=2 SV=1	AT5G10560.1	| Symbols: | Glycosyl hydrolase family protein | chr5:3336335-3339351 REVERSE LENGTH=792	LOC_Os04g44840.1	protein|glycosyl hydrolase family 3 protein, putative, expressed	IMGA|Medtr5g030860.1	Beta-D-xylosidase chr5 12766808-12771719 E EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0009044|xylan 1,4-beta-xylosidase activity	GO:0005576|extracellular region GO:0005773|vacuole GO:0005774|vacuolar membrane
pt2_01103	A	A1S	Potri.001G089000	Potri.001G089000(AS)	POPTR_0001s10860	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006499|N-terminal protein myristoylation	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01104	C	C1S	Potri.001G088900	Potri.001G088900(CS)	sp|Q9FLE8|Y5986_ARATH	Uncharacterized protein At5g39865 OS=Arabidopsis thaliana GN=At5g39865 PE=1 SV=1	AT1G64500.1	| Symbols: | Glutaredoxin family protein | chr1:23953270-23954376 FORWARD LENGTH=368	LOC_Os01g13480.1	protein|glutaredoxin, putative, expressed	IMGA|Medtr1g090400.1	Glutaredoxin domain-containing cysteine-rich protein chr1 24959357-24960466 H EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0009902|chloroplast relocation GO:0045454|cell redox homeostasis GO:0048653|anther development GO:0051017|actin filament bundle assembly	GO:0009055|electron carrier activity GO:0015035|protein disulfide oxidoreductase activity	GO:0005634|nucleus GO:0005884|actin filament
pt2_01105	A	A1S	Potri.001G088800	Potri.001G088800(AS)	POPTR_0001s10880	sp|P37707|B2_DAUCA	B2 protein OS=Daucus carota PE=2 SV=1	AT5G42050.1	| Symbols: | DCD (Development and Cell Death) domain protein | chr5:16815630-16816932 FORWARD LENGTH=349	LOC_Os01g36950.2	protein|N-rich protein, putative, expressed	IMGA|contig_74333_1.1	Gda-1 contig_74333 1591-4533 F PREDN 20111014	GO:0000165|MAPK cascade GO:0006499|N-terminal protein myristoylation GO:0006612|protein targeting to membrane GO:0009409|response to cold GO:0009605|response to external stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010363|regulation of plant-type hypersensitive response GO:0030968|endoplasmic reticulum unfolded protein response GO:0031348|negative regulation of defense response GO:0043069|negative regulation of programmed cell death GO:0050832|defense response to fungus	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_01106	A	A2S	Potri.001G088700	Potri.001G088700(AS) Potri.003G142000(DS)	POPTR_0001s10890	sp|P52410|KASC1_ARATH	3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Arabidopsis thaliana GN=KAS1 PE=1 SV=2	AT5G46290.1	| Symbols: KASI, KAS1 | 3-ketoacyl-acyl carrier protein synthase I | chr5:18774439-18776629 REVERSE LENGTH=473	LOC_Os06g09630.1	protein|3-oxoacyl-synthase, putative, expressed	NA	NA	GO:0000038|very long-chain fatty acid metabolic process GO:0006633|fatty acid biosynthetic process GO:0008152|metabolic process GO:0009058|biosynthetic process GO:0009409|response to cold GO:0009790|embryo development GO:0010020|chloroplast fission GO:0042335|cuticle development	GO:0003824|catalytic activity GO:0004312|fatty acid synthase activity GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0009507|chloroplast GO:0009536|plastid GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope GO:0016020|membrane
pt2_01107	A	A1S	Potri.001G088600	Potri.001G088600(AS)	POPTR_0001s10900	sp|Q9XED8|ARFI_ARATH	Auxin response factor 9 OS=Arabidopsis thaliana GN=ARF9 PE=2 SV=1	AT4G23980.1	| Symbols: ARF9 | auxin response factor 9 | chr4:12451592-12454737 FORWARD LENGTH=638	LOC_Os02g35140.1	protein|auxin response factor 7, putative, expressed	IMGA|Medtr5g076270.1	Auxin response factor chr5 31499972-31490689 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009725|response to hormone stimulus	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_01108	B	B1S	Potri.001G088600	Potri.001G088600(BS)	POPTR_0001s10900	sp|Q9XED8|ARFI_ARATH	Auxin response factor 9 OS=Arabidopsis thaliana GN=ARF9 PE=2 SV=1	AT4G23980.1	| Symbols: ARF9 | auxin response factor 9 | chr4:12451592-12454737 FORWARD LENGTH=638	LOC_Os02g35140.1	protein|auxin response factor 7, putative, expressed	IMGA|Medtr5g076270.1	Auxin response factor chr5 31499972-31490689 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009725|response to hormone stimulus	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_01109	B	B1S	Potri.001G088600	Potri.001G088600(BS)	POPTR_0001s10900	sp|Q9XED8|ARFI_ARATH	Auxin response factor 9 OS=Arabidopsis thaliana GN=ARF9 PE=2 SV=1	AT4G23980.1	| Symbols: ARF9 | auxin response factor 9 | chr4:12451592-12454737 FORWARD LENGTH=638	LOC_Os02g35140.1	protein|auxin response factor 7, putative, expressed	IMGA|Medtr5g076270.1	Auxin response factor chr5 31499972-31490689 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009725|response to hormone stimulus	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_01110	A	A1S	Potri.001G088500	Potri.001G088500(AS)	POPTR_0001s10910	sp|Q0WVN5|CSLG3_ARATH	Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2	AT4G23990.1	| Symbols: ATCSLG3, CSLG3 | cellulose synthase like G3 | chr4:12456491-12460498 FORWARD LENGTH=751	LOC_Os07g24190.2	protein|CESA3 - cellulose synthase, expressed	IMGA|contig_10763_1.1	Cellulose synthase contig_10763 678-4315 H PREDN 20111014	GO:0000271|polysaccharide biosynthetic process GO:0030244|cellulose biosynthetic process	GO:0016740|transferase activity GO:0016757|transferase activity, transferring glycosyl groups GO:0016759|cellulose synthase activity GO:0016760|cellulose synthase (UDP-forming) activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_01111	A	A1S	Potri.001G088400	Potri.001G088400(AS)	POPTR_0001s10920	sp|Q84TF5|RHA4A_ARATH	RING-H2 zinc finger protein RHA4a OS=Arabidopsis thaliana GN=RHA4A PE=2 SV=1	AT4G24015.1	| Symbols: | RING/U-box superfamily protein | chr4:12469887-12471197 REVERSE LENGTH=174	LOC_Os02g35144.1	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr5g026730.1	RING finger family protein chr5 10788362-10788966 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0008270|zinc ion binding	GO:0005575|cellular_component
pt2_01112	A	A1S	Potri.001G088300	Potri.001G088300(AS)	POPTR_0001s10930	sp|Q8VY91|RR6_ARATH	30S ribosomal protein S6 alpha, chloroplastic OS=Arabidopsis thaliana GN=RPS6 PE=1 SV=1	AT1G64510.1	| Symbols: | Translation elongation factor EF1B/ribosomal protein S6 family protein | chr1:23954993-23956205 REVERSE LENGTH=207	LOC_Os03g62630.1	protein|ribosomal protein S6, putative, expressed	NA	NA	GO:0006412|translation GO:0010027|thylakoid membrane organization	GO:0003735|structural constituent of ribosome GO:0019843|rRNA binding	GO:0005840|ribosome GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009579|thylakoid
pt2_01113	A	A1S	Potri.001G088200	Potri.001G088200(AS)	POPTR_0001s10940	sp|Q9SGW3|RP12A_ARATH	26S proteasome non-ATPase regulatory subunit RPN12A OS=Arabidopsis thaliana GN=RPN12A PE=1 SV=1	AT1G64520.1	| Symbols: RPN12a | regulatory particle non-ATPase 12A | chr1:23956459-23958120 FORWARD LENGTH=267	LOC_Os07g25420.1	protein|26S proteasome non-ATPase regulatory subunit 8, putative, expressed	IMGA|Medtr1g016750.1	26S proteasome non-ATPase regulatory subunit chr1 4926610-4930733 F EGN_Mt100125 20111014	GO:0006508|proteolysis GO:0006511|ubiquitin-dependent protein catabolic process GO:0006635|fatty acid beta-oxidation GO:0009407|toxin catabolic process GO:0009408|response to heat GO:0009647|skotomorphogenesis GO:0009733|response to auxin stimulus GO:0009735|response to cytokinin stimulus GO:0009908|flower development GO:0030163|protein catabolic process GO:0031540|regulation of anthocyanin biosynthetic process GO:0042023|DNA endoreduplication GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0043248|proteasome assembly GO:0048366|leaf development GO:0048528|post-embryonic root development GO:0048767|root hair elongation GO:0048825|cotyledon development GO:0051510|regulation of unidimensional cell growth GO:0051604|protein maturation GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	GO:0008233|peptidase activity	GO:0000502|proteasome complex GO:0005634|nucleus GO:0005829|cytosol GO:0005838|proteasome regulatory particle GO:0008541|proteasome regulatory particle, lid subcomplex GO:0009941|chloroplast envelope
pt2_01114	A	A1S	Potri.001G088100	Potri.001G088100(AS)	POPTR_0001s10950	sp|Q9M3A3|ABIL2_ARATH	Protein ABIL2 OS=Arabidopsis thaliana GN=ABIL2 PE=1 SV=1	AT3G49290.2	| Symbols: ABIL2 | ABL interactor-like protein 2 | chr3:18273407-18275221 FORWARD LENGTH=312	LOC_Os01g37110.1	protein|ABIL2, putative, expressed	IMGA|contig_65138_2.1	Protein ABIL1 contig_65138 4880-2197 E PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_01115	A	A1S	Potri.001G088000	Potri.001G088000(AS)	POPTR_0001s10960	sp|Q84TI6|CDKE1_ARATH	Cyclin-dependent kinase E-1 OS=Arabidopsis thaliana GN=CDKE-1 PE=1 SV=2	AT5G63610.1	| Symbols: HEN3, CDKE;1, ATCDK8 | cyclin-dependent kinase E;1 | chr5:25463645-25465057 REVERSE LENGTH=470	LOC_Os10g42950.1	protein|cyclin-dependent kinase E-1, putative, expressed	IMGA|Medtr5g008860.1	hypothetical protein chr5 1727811-1731359 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0010440|stomatal lineage progression GO:0042023|DNA endoreduplication GO:0045736|negative regulation of cyclin-dependent protein kinase activity	GO:0005515|protein binding GO:0016301|kinase activity	GO:0005634|nucleus
pt2_01116	A	A1S	Potri.001G087900	Potri.001G087900(AS)	POPTR_0001s10970	sp|Q84TH9|NLP7_ARATH	Protein NLP7 OS=Arabidopsis thaliana GN=NLP7 PE=1 SV=2	AT4G24020.1	| Symbols: NLP7 | NIN like protein 7 | chr4:12479904-12483822 FORWARD LENGTH=959	LOC_Os01g13540.1	protein|NIN, putative, expressed	IMGA|Medtr5g099060.1	Nodule inception protein chr5 42369070-42372458 E EGN_Mt100125 20111014	GO:0009414|response to water deprivation GO:0010167|response to nitrate GO:0042128|nitrate assimilation	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_01117	A	A1S	Potri.001G087800	Potri.001G087800(AS)	POPTR_0001s10980	sp|P0CI65|NPHP3_DANRE	Nephrocystin-3 OS=Danio rerio GN=nphp3 PE=3 SV=1	AT4G10840.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:6656614-6659033 FORWARD LENGTH=609	LOC_Os02g01960.1	protein|tetratricopeptide repeat domain containing protein, expressed	NA	NA	NA	NA	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_01118	A	A1S	Potri.001G087700	Potri.001G087700(AS)	POPTR_0001s10990	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01119	A	A1S	Potri.001G087600	Potri.001G087600(AS)	POPTR_0001s11000	sp|Q9LIR6|BAM1_ARATH	Beta-amylase 1, chloroplastic OS=Arabidopsis thaliana GN=BAM1 PE=1 SV=1	AT3G23920.1	| Symbols: BAM1, BMY7, TR-BAMY | beta-amylase 1 | chr3:8641722-8644199 FORWARD LENGTH=575	LOC_Os01g13550.1	protein|beta-amylase, putative, expressed	IMGA|Medtr5g013620.1	Beta-amylase chr5 4108565-4105840 E EGN_Mt100125 20111014	GO:0000272|polysaccharide catabolic process GO:0005975|carbohydrate metabolic process GO:0005983|starch catabolic process GO:0009414|response to water deprivation	GO:0003824|catalytic activity GO:0016161|beta-amylase activity GO:0043169|cation binding	GO:0005634|nucleus GO:0005829|cytosol GO:0009507|chloroplast
pt2_01120	A	A1S	Potri.001G087500	Potri.001G087500(AS)	POPTR_0001s11010	sp|Q03685|BIP5_TOBAC	Luminal-binding protein 5 OS=Nicotiana tabacum GN=BIP5 PE=2 SV=1	AT5G42020.1	| Symbols: BIP, BIP2 | Heat shock protein 70 (Hsp 70) family protein | chr5:16807697-16810480 REVERSE LENGTH=668	LOC_Os02g02410.1	protein|DnaK family protein, putative, expressed	IMGA|Medtr5g066800.1	Heat shock protein chr5 27240729-27238467 H EGN_Mt100125 20111014	GO:0006457|protein folding GO:0009408|response to heat GO:0010197|polar nucleus fusion GO:0030433|ER-associated protein catabolic process GO:0034976|response to endoplasmic reticulum stress GO:0046686|response to cadmium ion	GO:0005524|ATP binding	GO:0005618|cell wall GO:0005634|nucleus GO:0005730|nucleolus GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005783|endoplasmic reticulum GO:0005788|endoplasmic reticulum lumen GO:0005794|Golgi apparatus GO:0005829|cytosol GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0009507|chloroplast GO:0016020|membrane GO:0016592|mediator complex
pt2_01121	A	A1S	Potri.001G087400	Potri.001G087400(AS)	POPTR_0001s11020	sp|P38795|NADE_YEAST	Glutamine-dependent NAD(+) synthetase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=QNS1 PE=1 SV=1	AT1G55090.1	| Symbols: | carbon-nitrogen hydrolase family protein | chr1:20554857-20558188 FORWARD LENGTH=725	LOC_Os07g07260.1	protein|glutamine-dependent NAD, putative, expressed	NA	NA	GO:0006807|nitrogen compound metabolic process GO:0009435|NAD biosynthetic process GO:0046686|response to cadmium ion	GO:0003952|NAD+ synthase (glutamine-hydrolyzing) activity GO:0005524|ATP binding GO:0016810|hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	GO:0005829|cytosol
pt2_01122	A	A1S	Potri.001G087300	Potri.001G087300(AS)	POPTR_0001s11030	sp|Q8H0V6|AB3F_ARATH	ABC transporter F family member 3 OS=Arabidopsis thaliana GN=ABCF3 PE=2 SV=1	AT1G64550.1	| Symbols: ATGCN3, GCN3 | general control non-repressible 3 | chr1:23968850-23973369 FORWARD LENGTH=715	LOC_Os02g58020.1	protein|ABC transporter, ATP-binding protein, putative, expressed	NA	NA	GO:0006094|gluconeogenesis GO:0006096|glycolysis GO:0006406|mRNA export from nucleus GO:0006606|protein import into nucleus GO:0007010|cytoskeleton organization GO:0009651|response to salt stress GO:0010498|proteasomal protein catabolic process GO:0042742|defense response to bacterium GO:0046686|response to cadmium ion	GO:0000166|nucleotide binding GO:0005215|transporter activity GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_01123	C	C1S	Potri.001G087200	Potri.001G087200(CS)	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_01124	A	A1S	Potri.001G087100	Potri.001G087100(AS)	POPTR_0001s11050	sp|Q9SU50|TRE1_ARATH	Trehalase OS=Arabidopsis thaliana GN=TRE1 PE=2 SV=1	AT4G24040.1	| Symbols: ATTRE1, TRE1 | trehalase 1 | chr4:12488242-12491060 FORWARD LENGTH=626	LOC_Os10g37660.1	protein|trehalase precursor, putative, expressed	NA	NA	GO:0005991|trehalose metabolic process GO:0005993|trehalose catabolic process	GO:0003824|catalytic activity GO:0004555|alpha,alpha-trehalase activity GO:0015927|trehalase activity	GO:0005886|plasma membrane
pt2_01125	A	A2S	Potri.001G087000	Potri.001G087000(AS) Potri.006G191300(BS)	POPTR_0001s11060	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01126	A	A2S	Potri.001G086900	Potri.001G086900(AS) Potri.003G144100(DS)	POPTR_0001s11070	sp|Q6RVV4|TIC32_PEA	Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum GN=TIC32 PE=1 SV=1	AT4G24050.1	| Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr4:12497287-12499661 FORWARD LENGTH=332	LOC_Os06g03830.1	protein|retinol dehydrogenase, putative, expressed	IMGA|contig_12100_1.1	Retinol dehydrogenase contig_12100 683-1422 E PREDN 20111014	GO:0008152|metabolic process	GO:0000166|nucleotide binding GO:0016491|oxidoreductase activity	NA
pt2_01127	A	A1S	Potri.001G086800	Potri.001G086800(AS)	POPTR_0001s11080	sp|Q2TBP8|MET17_BOVIN	Methyltransferase-like protein 17, mitochondrial OS=Bos taurus GN=METTL17 PE=2 SV=1	AT1G64600.1	| Symbols: | methyltransferases;copper ion binding | chr1:23995996-23998625 FORWARD LENGTH=537	LOC_Os07g20150.1	protein|expressed protein	NA	NA	GO:0006412|translation	GO:0005507|copper ion binding GO:0008168|methyltransferase activity	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_01128	A	A1S	Potri.001G086700	Potri.001G086700(AS)	POPTR_0001s11100	sp|O22264|MYB12_ARATH	Transcription factor MYB12 OS=Arabidopsis thaliana GN=MYB12 PE=2 SV=1	AT5G49330.1	| Symbols: MYB111, ATMYB111, PFG3 | myb domain protein 111 | chr5:19999147-20001293 REVERSE LENGTH=342	LOC_Os05g35500.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr5g079670.1	Myb-like transcription factor chr5 33056957-33055245 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0051555|flavonol biosynthetic process	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_01129	A	A1S	Potri.001G086600	Potri.001G086600(AS)	POPTR_0001s11110	sp|Q9XSC3|WDR44_BOVIN	WD repeat-containing protein 44 OS=Bos taurus GN=WDR44 PE=1 SV=1	AT5G24320.1	| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr5:8284858-8287651 REVERSE LENGTH=694	LOC_Os03g02440.2	protein|WD repeat-containing protein 44, putative, expressed	NA	NA	GO:0007165|signal transduction GO:0010228|vegetative to reproductive phase transition of meristem GO:0016926|protein desumoylation GO:0050665|hydrogen peroxide biosynthetic process	GO:0004871|signal transducer activity	GO:0005737|cytoplasm GO:0005834|heterotrimeric G-protein complex
pt2_01130	A	A1S	Potri.001G086600	Potri.001G086600(AS)	POPTR_0001s11110	sp|Q9XSC3|WDR44_BOVIN	WD repeat-containing protein 44 OS=Bos taurus GN=WDR44 PE=1 SV=1	AT5G24320.1	| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr5:8284858-8287651 REVERSE LENGTH=694	LOC_Os03g02440.2	protein|WD repeat-containing protein 44, putative, expressed	NA	NA	GO:0007165|signal transduction GO:0010228|vegetative to reproductive phase transition of meristem GO:0016926|protein desumoylation GO:0050665|hydrogen peroxide biosynthetic process	GO:0004871|signal transducer activity	GO:0005737|cytoplasm GO:0005834|heterotrimeric G-protein complex
pt2_01131	A	A8S	Potri.001G086500	Potri.001G086500(AS) Potri.003G008100(BS) Potri.007G091500(BS) Potri.008G223100(BS) Potri.001G372600(BS) Potri.012G063600(BS) Potri.010G079600(DS) Potri.008G057200(DS)	POPTR_0001s11120	sp|P42698|DR111_ARATH	DNA-damage-repair/toleration protein DRT111, chloroplastic OS=Arabidopsis thaliana GN=DRT111 PE=2 SV=2	AT1G30480.1	| Symbols: DRT111 | D111/G-patch domain-containing protein | chr1:10790315-10792423 FORWARD LENGTH=387	LOC_Os01g34190.1	protein|G-patch domain containing protein, expressed	NA	NA	GO:0000724|double-strand break repair via homologous recombination GO:0006281|DNA repair GO:0006312|mitotic recombination GO:0006355|regulation of transcription, DNA-dependent GO:0009560|embryo sac egg cell differentiation GO:0010212|response to ionizing radiation GO:0043687|post-translational protein modification GO:0045893|positive regulation of transcription, DNA-dependent	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0009507|chloroplast
pt2_01132	A	A2S	Potri.001G086400	Potri.001G086400(AS) Potri.003G144500(DS)	POPTR_0001s11130	sp|Q8LAP8|DOF46_ARATH	Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana GN=DOF4.6 PE=2 SV=2	AT4G24060.1	| Symbols: | Dof-type zinc finger DNA-binding family protein | chr4:12503970-12505417 FORWARD LENGTH=342	LOC_Os04g47990.1	protein|dof zinc finger domain containing protein, putative, expressed	IMGA|Medtr5g031440.1	Dof zinc finger protein chr5 13054757-13055767 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01133	A	A2S	Potri.001G086300	Potri.001G086300(AS) Potri.003G144600(DS)	POPTR_0001s11140	sp|O42901|YBA9_SCHPO	Uncharacterized protein C119.09c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC119.09c PE=2 SV=3	AT5G42000.1	| Symbols: | ORMDL family protein | chr5:16799455-16800681 FORWARD LENGTH=154	LOC_Os07g26940.1	protein|ORM1, putative, expressed	IMGA|contig_9619_1.1	ORMDL family protein-like protein contig_9619 1209-2156 E PREDN 20111014	GO:0006457|protein folding	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0005783|endoplasmic reticulum GO:0016021|integral to membrane
pt2_01134	A	A1S	Potri.001G086200	Potri.001G086200(AS)	POPTR_0001s11150	sp|Q14FG6|RPOC1_POPAL	DNA-directed RNA polymerase subunit beta' OS=Populus alba GN=rpoC1 PE=3 SV=1	ATCG00180.1	| Symbols: RPOC1 | DNA-directed RNA polymerase family protein | chrC:20251-23084 REVERSE LENGTH=680	LOC_Os02g24614.1	protein|DNA-directed RNA polymerase subunit beta, putative, expressed	IMGA|AC151738_16.1	DNA-directed RNA polymerase AC151738.84 47513-46104 H EGN_Mt100125 20111014	GO:0006091|generation of precursor metabolites and energy GO:0006351|transcription, DNA-dependent GO:0006354|DNA-dependent transcription, elongation GO:0015979|photosynthesis	GO:0003677|DNA binding GO:0003899|DNA-directed RNA polymerase activity	GO:0009295|nucleoid GO:0009507|chloroplast
pt2_01135	A	A2S	Potri.001G086100	Potri.001G086100(AS) Potri.003G144700(DS)	POPTR_0001s11160	sp|Q8RX01|Y3567_ARATH	BTB/POZ domain-containing protein At3g05675 OS=Arabidopsis thaliana GN=At3g05675 PE=2 SV=1	AT3G05675.1	| Symbols: | BTB/POZ domain-containing protein | chr3:1658425-1659859 REVERSE LENGTH=441	LOC_Os06g03840.1	protein|H-BTB4 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed	NA	NA	NA	NA	GO:0005634|nucleus
pt2_01136	A	A1S	Potri.001G086000	Potri.001G086000(AS)	POPTR_0001s11170	sp|Q9XIN0|LHW_ARATH	Transcription factor LHW OS=Arabidopsis thaliana GN=LHW PE=1 SV=1	AT2G27230.2	| Symbols: LHW | transcription factor-related | chr2:11650895-11653840 FORWARD LENGTH=650	LOC_Os02g45170.1	protein|helix-loop-helix DNA-binding protein, putative, expressed	NA	NA	NA	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_01137	A	A2S	Potri.001G086000	Potri.001G086000(AS) Potri.003G144900(DS)	POPTR_0001s11170	sp|Q9XIN0|LHW_ARATH	Transcription factor LHW OS=Arabidopsis thaliana GN=LHW PE=1 SV=1	AT2G27230.2	| Symbols: LHW | transcription factor-related | chr2:11650895-11653840 FORWARD LENGTH=650	LOC_Os02g45170.1	protein|helix-loop-helix DNA-binding protein, putative, expressed	NA	NA	NA	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_01138	A	A1S	Potri.001G085900	Potri.001G085900(AS)	POPTR_0001s11180	sp|O23086|ALMTA_ARATH	Aluminum-activated malate transporter 10 OS=Arabidopsis thaliana GN=ALMT10 PE=2 SV=2	AT4G00910.1	| Symbols: | Aluminium activated malate transporter family protein | chr4:389370-391287 REVERSE LENGTH=497	LOC_Os02g45160.1	protein|aluminum-activated malate transporter, putative, expressed	IMGA|Medtr5g014310.1	hypothetical protein chr5 4526352-4523171 H EGN_Mt100125 20111014	GO:0010044|response to aluminum ion	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_01139	A	A1S	Potri.001G085800	Potri.001G085800(AS)	POPTR_0001s11190	NA	NA	AT5G63830.1	| Symbols: | HIT-type Zinc finger family protein | chr5:25543585-25544802 REVERSE LENGTH=405	LOC_Os10g37640.2	protein|HIT zinc finger domain containing protein, expressed	IMGA|Medtr5g025880.1	Kinase-like protein chr5 10317546-10325535 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_01140	A	A1S	Potri.001G085600	Potri.001G085600(AS)	POPTR_0001s11200	sp|Q6GQ69|FAF2B_XENLA	FAS-associated factor 2-B OS=Xenopus laevis GN=faf2-b PE=2 SV=1	AT4G10790.1	| Symbols: | UBX domain-containing protein | chr4:6640752-6643035 REVERSE LENGTH=480	LOC_Os10g37630.1	protein|UBX domain-containing protein, putative, expressed	IMGA|contig_48589_1.1	Fas-associated factor-like protein contig_48589 582-2703 E PREDN 20111014	GO:0006499|N-terminal protein myristoylation GO:0008150|biological_process	NA	GO:0005737|cytoplasm GO:0005886|plasma membrane
pt2_01141	A	A1S	Potri.001G085500	Potri.001G085500(AS)	POPTR_0001s11210	sp|Q944Q0|WNK8_ARATH	Serine/threonine-protein kinase WNK8 OS=Arabidopsis thaliana GN=WNK8 PE=1 SV=1	AT5G41990.1	| Symbols: WNK8, ATWNK8 | with no lysine (K) kinase 8 | chr5:16795085-16797562 REVERSE LENGTH=563	LOC_Os02g45130.1	protein|protein kinase, putative, expressed	IMGA|Medtr5g075220.1	With no lysine kinase chr5 30954366-30951020 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006865|amino acid transport GO:0006888|ER to Golgi vesicle-mediated transport GO:0009909|regulation of flower development GO:0009911|positive regulation of flower development GO:0010228|vegetative to reproductive phase transition of meristem GO:0016926|protein desumoylation GO:0043090|amino acid import GO:0046777|protein autophosphorylation GO:0048573|photoperiodism, flowering GO:0050665|hydrogen peroxide biosynthetic process	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_01142	A	A3S	Potri.001G085400	Potri.001G085400(AS) Potri.012G019100(DS) Potri.015G009200(DS)	POPTR_0001s11220	sp|Q9T096|YIPL6_ARATH	Protein yippee-like At4g27745 OS=Arabidopsis thaliana GN=At4g27745 PE=3 SV=2	AT4G27745.1	| Symbols: | Yippee family putative zinc-binding protein | chr4:13840530-13841279 FORWARD LENGTH=106	LOC_Os12g29960.1	protein|yippee zinc-binding protein, putative, expressed	IMGA|contig_48589_2.1	Protein yippee-like protein contig_48589 5769-4120 E PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01143	A	A1S	Potri.001G085200	Potri.001G085200(AS)	POPTR_0001s11230	sp|Q6EU10|MTA70_ORYSJ	Probable N6-adenosine-methyltransferase MT-A70-like OS=Oryza sativa subsp. japonica GN=Os02g0672600 PE=2 SV=1	AT4G10760.1	| Symbols: EMB1706, MTA | mRNAadenosine methylase | chr4:6619947-6623312 REVERSE LENGTH=685	LOC_Os02g45110.1	protein|MT-A70 domain containing protein, expressed	NA	NA	GO:0006139|nucleobase-containing compound metabolic process GO:0009793|embryo development ending in seed dormancy GO:0080009|mRNA methylation	GO:0005515|protein binding GO:0008168|methyltransferase activity GO:0008757|S-adenosylmethionine-dependent methyltransferase activity	GO:0005634|nucleus GO:0009507|chloroplast GO:0016607|nuclear speck
pt2_01144	A	A1S	Potri.001G085100	Potri.001G085100(AS)	POPTR_0001s11240	sp|Q9SK27|ENL1_ARATH	Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060 PE=1 SV=2	AT1G64640.1	| Symbols: ENODL8, AtENODL8 | early nodulin-like protein 8 | chr1:24022482-24023151 REVERSE LENGTH=191	LOC_Os03g02400.1	protein|plastocyanin-like domain containing protein, putative, expressed	IMGA|Medtr5g006040.1	Early nodulin-like protein chr5 502223-501280 F EGN_Mt100125 20111014	NA	GO:0005507|copper ion binding GO:0009055|electron carrier activity	GO:0005886|plasma membrane GO:0031225|anchored to membrane
pt2_01145	A	A1S	Potri.001G085000	Potri.001G085000(AS)	POPTR_0001s11250	sp|Q921Y4|MFSD5_MOUSE	Major facilitator superfamily domain-containing protein 5 OS=Mus musculus GN=Mfsd5 PE=2 SV=1	AT1G64650.1	| Symbols: | Major facilitator superfamily protein | chr1:24023805-24026336 REVERSE LENGTH=462	LOC_Os03g02380.1	protein|major facilitator superfamily domain-containing protein 5, putative, expressed	IMGA|Medtr5g016080.1	Major facilitator superfamily domain-containing protein chr5 5434867-5440129 H EGN_Mt100125 20111014	GO:0006084|acetyl-CoA metabolic process GO:0016126|sterol biosynthetic process GO:0016132|brassinosteroid biosynthetic process	NA	GO:0005768|endosome GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0009507|chloroplast
pt2_01146	A	A1S	Potri.001G084900	Potri.001G084900(AS)	POPTR_0001s11260	sp|Q3YU43|HPCH_SHISS	4-hydroxy-2-oxo-heptane-1,7-dioate aldolase OS=Shigella sonnei (strain Ss046) GN=hpcH PE=3 SV=1	AT4G10750.1	| Symbols: | Phosphoenolpyruvate carboxylase family protein | chr4:6618724-6619800 FORWARD LENGTH=358	LOC_Os09g36030.1	protein|4-hydroxy-2-oxovalerate aldolase, putative, expressed	NA	NA	GO:0006094|gluconeogenesis GO:0006096|glycolysis GO:0006725|cellular aromatic compound metabolic process GO:0019253|reductive pentose-phosphate cycle GO:0019648|formaldehyde assimilation via xylulose monophosphate cycle GO:0019650|glucose catabolic process to butanediol GO:0019654|acetate fermentation	GO:0003824|catalytic activity GO:0016830|carbon-carbon lyase activity	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009536|plastid
pt2_01147	A	A2S	Potri.001G084800	Potri.001G084800(AS) Potri.003G145900(DA)	POPTR_0001s11270	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01148	A	A2S	Potri.001G084700	Potri.001G084700(AS) Potri.003G146000(DS)	POPTR_0001s11280	sp|Q551H4|FRAY2_DICDI	Serine/threonine-protein kinase fray2 OS=Dictyostelium discoideum GN=fray2 PE=3 SV=1	AT4G10730.1	| Symbols: | Protein kinase superfamily protein | chr4:6609793-6614786 REVERSE LENGTH=711	LOC_Os10g37480.1	protein|STE_PAK_Ste20_STLK.6 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	IMGA|Medtr5g045190.1	Serine/threonine protein kinase chr5 19408593-19396721 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_01149	A	A2S	Potri.001G084700	Potri.001G084700(AS) Potri.003G146000(DS)	POPTR_0001s11280	sp|Q551H4|FRAY2_DICDI	Serine/threonine-protein kinase fray2 OS=Dictyostelium discoideum GN=fray2 PE=3 SV=1	AT4G10730.1	| Symbols: | Protein kinase superfamily protein | chr4:6609793-6614786 REVERSE LENGTH=711	LOC_Os10g37480.1	protein|STE_PAK_Ste20_STLK.6 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	IMGA|Medtr5g045190.1	Serine/threonine protein kinase chr5 19408593-19396721 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_01150	A	A1S	Potri.001G084700	Potri.001G084700(AS)	POPTR_0001s11280	sp|Q551H4|FRAY2_DICDI	Serine/threonine-protein kinase fray2 OS=Dictyostelium discoideum GN=fray2 PE=3 SV=1	AT4G10730.1	| Symbols: | Protein kinase superfamily protein | chr4:6609793-6614786 REVERSE LENGTH=711	LOC_Os10g37480.1	protein|STE_PAK_Ste20_STLK.6 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	IMGA|Medtr5g045190.1	Serine/threonine protein kinase chr5 19408593-19396721 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_01151	A	A1S	Potri.001G084600	Potri.001G084600(AS)	POPTR_0001s11290	NA	NA	AT5G41960.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:16789760-16790868 FORWARD LENGTH=217	LOC_Os04g49610.1	protein|expressed protein	IMGA|Medtr5g008220.1	hypothetical protein chr5 1471622-1469570 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_01152	A	A1S	Potri.001G084500	Potri.001G084500(AS)	POPTR_0001s11300	NA	NA	AT4G24090.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 144 Blast hits to 142 proteins in 73 species: Archae - 3; Bacteria - 62; Metazoa - 7; Fungi - 13; Plants - 44; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). | chr4:12512742-12514467 FORWARD LENGTH=308	LOC_Os09g35990.1	protein|expressed protein	NA	NA	GO:0008150|biological_process GO:0009965|leaf morphogenesis GO:0016556|mRNA modification GO:0030154|cell differentiation	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_01153	A	A1S	Potri.001G084400	Potri.001G084400(AS)	POPTR_0001s11310	sp|Q6R3L0|YSL1_ARATH	Metal-nicotianamine transporter YSL1 OS=Arabidopsis thaliana GN=YSL1 PE=2 SV=2	AT4G24120.1	| Symbols: YSL1, ATYSL1 | YELLOW STRIPE like 1 | chr4:12524581-12527023 FORWARD LENGTH=673	LOC_Os04g45860.1	protein|transposon protein, putative, unclassified, expressed	IMGA|Medtr1g007580.1	Metal-nicotianamine transporter YSL2 chr1 1011908-1008288 H EGN_Mt100125 20111014	GO:0003006|developmental process involved in reproduction GO:0006857|oligopeptide transport GO:0010039|response to iron ion GO:0048316|seed development GO:0055085|transmembrane transport	GO:0015198|oligopeptide transporter activity GO:0051980|iron-nicotianamine transmembrane transporter activity	GO:0005886|plasma membrane
pt2_01154	A	A2S	Potri.001G084300	Potri.001G084300(AS) Potri.003G146300(DS)	POPTR_0001s11320	sp|P09379|GYP7_YARLI	GTPase-activating protein GYP7 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=GYP7 PE=3 SV=2	AT5G41940.1	| Symbols: | Ypt/Rab-GAP domain of gyp1p superfamily protein | chr5:16782039-16785451 FORWARD LENGTH=549	LOC_Os09g35960.1	protein|TBC domain containing protein, expressed	IMGA|Medtr1g007590.3	GTPase activating-like protein chr1 1018744-1015229 E EGN_Mt100125 20111014	GO:0032313|regulation of Rab GTPase activity	GO:0005097|RAB GTPase activator activity	GO:0005622|intracellular GO:0005794|Golgi apparatus
pt2_01155	A	A2S	Potri.001G084200	Potri.001G084200(AS) Potri.003G146400(BS)	POPTR_0001s11330	NA	NA	AT4G24130.1	| Symbols: | Protein of unknown function, DUF538 | chr4:12527861-12528423 FORWARD LENGTH=157	LOC_Os01g11240.1	protein|DUF538 domain containing protein, putative, expressed	IMGA|contig_169528_1.1	Susceptibility homeodomain transcription factor contig_169528 967-509 H PREDN 20111014	GO:0008150|biological_process	NA	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_01156	C	C1S	Potri.001G084100	Potri.001G084100(CS)	sp|Q40863|EMB8_PICGL	Embryogenesis-associated protein EMB8 OS=Picea glauca GN=EMB8 PE=2 SV=1	AT3G50790.1	| Symbols: | esterase/lipase/thioesterase family protein | chr3:18880074-18881940 REVERSE LENGTH=408	LOC_Os02g43340.2	protein|hydrolase, alpha/beta fold family domain containing protein, expressed	NA	NA	GO:0009793|embryo development ending in seed dormancy	GO:0004091|carboxylesterase activity GO:0016787|hydrolase activity	NA
pt2_01157	A	A1S	Potri.001G084000	Potri.001G084000(AS)	POPTR_0001s11350	sp|P13254|MEGL_PSEPU	Methionine gamma-lyase OS=Pseudomonas putida GN=mdeA PE=1 SV=2	AT1G64660.1	| Symbols: ATMGL, MGL | methionine gamma-lyase | chr1:24028977-24030537 FORWARD LENGTH=441	LOC_Os10g37340.1	protein|cystathionine gamma-synthase, putative, expressed	NA	NA	GO:0006520|cellular amino acid metabolic process GO:0006730|one-carbon metabolic process GO:0009970|cellular response to sulfate starvation GO:0019458|methionine catabolic process via 2-oxobutanoate GO:0042631|cellular response to water deprivation GO:0051289|protein homotetramerization	GO:0003824|catalytic activity GO:0018826|methionine gamma-lyase activity	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_01158	A	A1S	Potri.001G083900	Potri.001G083900(AS)	POPTR_0001s11360	sp|O48927|C78A3_SOYBN	Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=2 SV=1	AT2G46660.1	| Symbols: CYP78A6 | cytochrome P450, family 78, subfamily A, polypeptide 6 | chr2:19153602-19155417 REVERSE LENGTH=530	LOC_Os08g43390.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g045250.1	Cytochrome P450 78A11 chr5 19442194-19440472 E EGN_Mt100125 20111014	GO:0048316|seed development	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0009507|chloroplast
pt2_01159	A	A1S	Potri.001G083800	Potri.001G083800(AS)	POPTR_0001s11370	sp|F4HPA7|MD10B_ARATH	Mediator of RNA polymerase II transcription subunit 10b OS=Arabidopsis thaliana GN=MED10B PE=1 SV=1	AT1G26665.1	| Symbols: | Mediator complex, subunit Med10 | chr1:9214510-9215426 FORWARD LENGTH=189	LOC_Os09g35920.2	protein|mediator of RNA polymerase II transcription subunit 10, putative, expressed	NA	NA	GO:0006357|regulation of transcription from RNA polymerase II promoter	GO:0001104|RNA polymerase II transcription cofactor activity	GO:0005634|nucleus GO:0016592|mediator complex
pt2_01160	A	A1S	Potri.001G083700	Potri.001G083700(AS)	POPTR_0001s11380	sp|P46897|ATHB7_ARATH	Homeobox-leucine zipper protein ATHB-7 OS=Arabidopsis thaliana GN=ATHB-7 PE=2 SV=2	AT2G46680.1	| Symbols: ATHB-7, ATHB7, HB-7 | homeobox 7 | chr2:19165777-19166773 REVERSE LENGTH=258	LOC_Os09g35910.1	protein|homeobox associated leucine zipper, putative, expressed	IMGA|Medtr5g038280.1	Homeobox-leucine zipper protein ATHB-16 chr5 16338163-16335797 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0042538|hyperosmotic salinity response GO:0045893|positive regulation of transcription, DNA-dependent	GO:0000976|transcription regulatory region sequence-specific DNA binding GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_01161	G	G1	NA	NA	POPTR_0001s11390	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01162	A	A1S	Potri.001G083500	Potri.001G083500(AS)	POPTR_0001s11400	sp|O23090|BH014_ARATH	Transcription factor bHLH14 OS=Arabidopsis thaliana GN=BHLH14 PE=2 SV=1	AT4G00870.1	| Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr4:362230-363639 REVERSE LENGTH=423	LOC_Os10g42430.1	protein|transcription factor MYC7E, putative, expressed	IMGA|Medtr5g030430.1	BHLH transcription factor chr5 12542132-12544882 E EGN_Mt100125 20111014	GO:0006568|tryptophan metabolic process GO:0006612|protein targeting to membrane GO:0009269|response to desiccation GO:0009611|response to wounding GO:0009620|response to fungus GO:0009694|jasmonic acid metabolic process GO:0009695|jasmonic acid biosynthetic process GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009753|response to jasmonic acid stimulus GO:0009759|indole glucosinolate biosynthetic process GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010200|response to chitin GO:0010363|regulation of plant-type hypersensitive response GO:0043069|negative regulation of programmed cell death GO:0043619|regulation of transcription from RNA polymerase II promoter in response to oxidative stress GO:0045893|positive regulation of transcription, DNA-dependent GO:0048364|root development GO:0051090|regulation of sequence-specific DNA binding transcription factor activity GO:2000068|regulation of defense response to insect	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_01163	A	A1S	Potri.001G083400	Potri.001G083400(AS)	POPTR_0001s11410	NA	NA	AT4G24140.1	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr4:12530032-12533664 REVERSE LENGTH=498	LOC_Os10g38860.1	protein|hydrolase, alpha/beta fold family domain containing protein, expressed	IMGA|contig_91404_1.1	Hydrolase alpha/beta fold family protein expressed contig_91404 816-234 E PREDN 20111014	NA	GO:0016787|hydrolase activity	GO:0005737|cytoplasm
pt2_01164	A	A1S	Potri.001G083300	Potri.001G083300(AS)	POPTR_0001s11420	NA	NA	AT1G64680.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03055.1); Has 146 Blast hits to 146 proteins in 26 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). | chr1:24036071-24037062 FORWARD LENGTH=250	LOC_Os08g02210.1	protein|expressed protein	IMGA|contig_85300_1.1	Homology to unknown gene contig_85300 66-2892 E PREDN 20111014	GO:0008150|biological_process GO:0016556|mRNA modification	GO:0003674|molecular_function	GO:0009534|chloroplast thylakoid GO:0009941|chloroplast envelope
pt2_01165	A	A2S	Potri.001G083200	Potri.001G083200(AS) Potri.003G147600(DS)	POPTR_0001s11430	sp|P05522|GUN1_PERAE	Endoglucanase 1 OS=Persea americana GN=CEL1 PE=2 SV=1	AT1G02800.1	| Symbols: ATCEL2, CEL2 | cellulase 2 | chr1:613386-616103 REVERSE LENGTH=501	LOC_Os08g02220.1	protein|endoglucanase, putative, expressed	IMGA|Medtr5g010000.1	Cellulase chr5 2335410-2338056 E EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0007389|pattern specification process GO:0009624|response to nematode GO:0009855|determination of bilateral symmetry GO:0009944|polarity specification of adaxial/abaxial axis GO:0010014|meristem initiation GO:0010051|xylem and phloem pattern formation GO:0010093|specification of floral organ identity GO:0048440|carpel development GO:0048507|meristem development	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0008810|cellulase activity	GO:0005576|extracellular region
pt2_01166	A	A2S	Potri.001G083100	Potri.001G083100(AS) Potri.003G147700(DS)	POPTR_0001s11440	sp|Q8BUV8|GP107_MOUSE	Protein GPR107 OS=Mus musculus GN=Gpr107 PE=2 SV=2	AT5G42090.1	| Symbols: | Lung seven transmembrane receptor family protein | chr5:16826830-16828149 FORWARD LENGTH=439	LOC_Os06g04130.1	protein|lung seven transmembrane domain containing protein, putative, expressed	NA	NA	NA	NA	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0009507|chloroplast GO:0016021|integral to membrane
pt2_01167	A	A1S	Potri.001G083000	Potri.001G083000(AS)	POPTR_0001s11450	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01168	A	A1S	Potri.001G082900	Potri.001G082900(AS)	POPTR_0001s11460	sp|C0LGH3|Y5614_ARATH	Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2	AT1G56140.1	| Symbols: | Leucine-rich repeat transmembrane protein kinase | chr1:21001708-21007725 REVERSE LENGTH=1033	LOC_Os08g10290.1	protein|SHR5-receptor-like kinase, putative, expressed	IMGA|Medtr5g091950.1	BED finger-nbs resistance protein chr5 39093432-39086414 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane GO:0016020|membrane
pt2_01169	A	A1S	Potri.001G082800	Potri.001G082800(AS)	POPTR_0001s11470	NA	NA	AT4G19550.1	| Symbols: | zinc ion binding;transcription regulators | chr4:10659414-10661170 REVERSE LENGTH=212	NA	NA	NA	NA	GO:0006352|DNA-dependent transcription, initiation GO:0006355|regulation of transcription, DNA-dependent	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_01170	A	A1S	Potri.001G082700	Potri.001G082700(AS)	POPTR_0001s11480	NA	NA	AT4G24150.1	| Symbols: AtGRF8, GRF8 | growth-regulating factor 8 | chr4:12535972-12539387 FORWARD LENGTH=493	LOC_Os02g47280.2	protein|growth-regulating factor, putative, expressed	IMGA|Medtr5g027030.1	hypothetical protein chr5 10949245-10952049 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009686|gibberellin biosynthetic process GO:0009740|gibberellic acid mediated signaling pathway GO:0016114|terpenoid biosynthetic process GO:0048366|leaf development	GO:0005524|ATP binding GO:0016818|hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	GO:0005634|nucleus GO:0009941|chloroplast envelope
pt2_01171	A	A1S	Potri.001G082600	Potri.001G082600(AS)	POPTR_0001s11490	NA	NA	AT1G64690.1	| Symbols: BLT | branchless trichome | chr1:24038069-24038890 FORWARD LENGTH=273	NA	NA	NA	NA	GO:0010090|trichome morphogenesis	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005886|plasma membrane
pt2_01172	A	A1S	Potri.001G082500	Potri.001G082500(AS)	POPTR_0001s11500	NA	NA	AT4G24110.1	| Symbols: | unknown protein; Has 76 Blast hits to 76 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:12520010-12520762 REVERSE LENGTH=250	NA	NA	NA	NA	GO:0080167|response to karrikin	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_01173	A	A1S	Potri.001G082400	Potri.001G082400(AS)	POPTR_0001s11510	sp|Q6R3L0|YSL1_ARATH	Metal-nicotianamine transporter YSL1 OS=Arabidopsis thaliana GN=YSL1 PE=2 SV=2	AT4G24120.1	| Symbols: YSL1, ATYSL1 | YELLOW STRIPE like 1 | chr4:12524581-12527023 FORWARD LENGTH=673	LOC_Os04g45860.1	protein|transposon protein, putative, unclassified, expressed	IMGA|Medtr1g007580.1	Metal-nicotianamine transporter YSL2 chr1 1011908-1008288 H EGN_Mt100125 20111014	GO:0003006|developmental process involved in reproduction GO:0006857|oligopeptide transport GO:0010039|response to iron ion GO:0048316|seed development GO:0055085|transmembrane transport	GO:0015198|oligopeptide transporter activity GO:0051980|iron-nicotianamine transmembrane transporter activity	GO:0005886|plasma membrane
pt2_01174	A	A2S	Potri.001G082300	Potri.001G082300(AS) Potri.003G148200(BA)	POPTR_0001s11520	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005576|extracellular region GO:0005886|plasma membrane
pt2_01175	G	G1	NA	NA	POPTR_0001s11530	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01176	A	A1S	Potri.001G082200	Potri.001G082200(AS)	POPTR_0001s11540	NA	NA	AT3G07200.2	| Symbols: | RING/U-box superfamily protein | chr3:2291343-2292223 FORWARD LENGTH=182	LOC_Os09g32690.1	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|contig_52784_1.1	RING finger protein contig_52784 30-4248 F PREDN 20111014	GO:0010200|response to chitin	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_01177	A	A1S	Potri.001G082100	Potri.001G082100(AS)	POPTR_0001s11550	sp|O43290|SNUT1_HUMAN	U4/U6.U5 tri-snRNP-associated protein 1 OS=Homo sapiens GN=SART1 PE=1 SV=1	AT5G16780.1	| Symbols: DOT2, MDF | SART-1 family | chr5:5517784-5521566 REVERSE LENGTH=820	LOC_Os02g30730.2	protein|SART-1 family protein, putative, expressed	NA	NA	GO:0006346|methylation-dependent chromatin silencing GO:0009640|photomorphogenesis GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009855|determination of bilateral symmetry GO:0009908|flower development GO:0009909|regulation of flower development GO:0009933|meristem structural organization GO:0010014|meristem initiation GO:0010073|meristem maintenance GO:0010087|phloem or xylem histogenesis GO:0010162|seed dormancy process GO:0010182|sugar mediated signaling pathway GO:0010228|vegetative to reproductive phase transition of meristem GO:0010305|leaf vascular tissue pattern formation GO:0010588|cotyledon vascular tissue pattern formation GO:0016246|RNA interference GO:0016567|protein ubiquitination GO:0019915|lipid storage GO:0048364|root development GO:0048366|leaf development GO:0048367|shoot development GO:0048528|post-embryonic root development GO:0050826|response to freezing	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005730|nucleolus
pt2_01178	A	A1S	Potri.001G082000	Potri.001G082000(AS)	POPTR_0001s11560	NA	NA	AT5G16950.1	| Symbols: | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:5572640-5572939 FORWARD LENGTH=99	LOC_Os01g15448.1	protein|expressed protein	IMGA|Medtr5g009530.1	Histone acetyltransferase type B subunit chr5 2065539-2079439 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_01179	C	C1S	Potri.001G082000	Potri.001G082000(CS)	NA	NA	AT5G16950.1	| Symbols: | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:5572640-5572939 FORWARD LENGTH=99	LOC_Os01g15448.1	protein|expressed protein	IMGA|Medtr5g009530.1	Histone acetyltransferase type B subunit chr5 2065539-2079439 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_01180	A	A1S	Potri.001G082000	Potri.001G082000(AS)	POPTR_0001s11560	NA	NA	AT5G16950.1	| Symbols: | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:5572640-5572939 FORWARD LENGTH=99	LOC_Os01g15448.1	protein|expressed protein	IMGA|Medtr5g009530.1	Histone acetyltransferase type B subunit chr5 2065539-2079439 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_01181	A	A1S	Potri.001G082000	Potri.001G082000(AS)	POPTR_0001s11560	NA	NA	AT5G16950.1	| Symbols: | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:5572640-5572939 FORWARD LENGTH=99	LOC_Os01g15448.1	protein|expressed protein	IMGA|Medtr5g009530.1	Histone acetyltransferase type B subunit chr5 2065539-2079439 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_01182	A	A1S	Potri.001G081900	Potri.001G081900(AS)	POPTR_0001s11570	sp|A4IG72|TGFA1_DANRE	Transforming growth factor-beta receptor-associated protein 1 homolog OS=Danio rerio GN=tgfbrap1 PE=2 SV=1	AT1G22860.1	| Symbols: | Vacuolar sorting protein 39 | chr1:8083400-8088867 FORWARD LENGTH=961	LOC_Os05g01360.1	protein|expressed protein	IMGA|contig_165584_1.1	Unknown protein contig_165584 152-1447 H PREDN 20111014	GO:0006886|intracellular protein transport GO:0016192|vesicle-mediated transport	GO:0005083|small GTPase regulator activity	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_01183	A	A1S	Potri.001G081800	Potri.001G081800(AS)	POPTR_0001s11580	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01184	A	A1S	Potri.001G081600	Potri.001G081600(AS)	POPTR_0001s11590	sp|Q9FKE6|CCT15_ARATH	Cyclin-T1-5 OS=Arabidopsis thaliana GN=CYCT1-5 PE=2 SV=2	AT5G45190.1	| Symbols: | Cyclin family protein | chr5:18277808-18280733 REVERSE LENGTH=579	LOC_Os12g30020.2	protein|cyclin-T1-4, putative, expressed	IMGA|Medtr5g055170.1	Cyclin-L1-1 chr5 22186882-22182089 F EGN_Mt100125 20111014	GO:0000079|regulation of cyclin-dependent protein kinase activity GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0006355|regulation of transcription, DNA-dependent GO:0006366|transcription from RNA polymerase II promoter GO:0006486|protein glycosylation GO:0008284|positive regulation of cell proliferation GO:0009615|response to virus GO:0009630|gravitropism GO:0009908|flower development GO:0010090|trichome morphogenesis GO:0048366|leaf development GO:0050792|regulation of viral reproduction GO:0051726|regulation of cell cycle	GO:0004693|cyclin-dependent protein kinase activity GO:0019901|protein kinase binding	GO:0005634|nucleus
pt2_01185	A	A1S	Potri.001G081500	Potri.001G081500(AS)	POPTR_0001s11600	sp|Q9SHE8|PSAF_ARATH	Photosystem I reaction center subunit III, chloroplastic OS=Arabidopsis thaliana GN=PSAF PE=1 SV=1	AT1G31330.1	| Symbols: PSAF | photosystem I subunit F | chr1:11215011-11215939 REVERSE LENGTH=221	LOC_Os03g56670.1	protein|photosystem I reaction center subunit III, chloroplast precursor, putative, expressed	IMGA|contig_83576_1.1	Photosystem I reaction center subunit III contig_83576 1562-44 F PREDN 20111014	GO:0015979|photosynthesis GO:0019344|cysteine biosynthetic process	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009522|photosystem I GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009538|photosystem I reaction center GO:0009579|thylakoid GO:0009941|chloroplast envelope GO:0010287|plastoglobule GO:0016020|membrane
pt2_01186	A	A1S	Potri.001G081400	Potri.001G081400(AS)	POPTR_0001s11610	sp|Q9SHE9|LBD4_ARATH	LOB domain-containing protein 4 OS=Arabidopsis thaliana GN=LBD4 PE=2 SV=1	AT1G31320.1	| Symbols: LBD4 | LOB domain-containing protein 4 | chr1:11213107-11214032 FORWARD LENGTH=172	LOC_Os05g27980.1	protein|DUF260 domain containing protein, putative, expressed	IMGA|Medtr5g083230.1	LOB domain-containing protein chr5 34907168-34908456 H EGN_Mt100125 20111014	GO:0008150|biological_process GO:0009855|determination of bilateral symmetry GO:0009944|polarity specification of adaxial/abaxial axis GO:0010014|meristem initiation GO:0010075|regulation of meristem growth	NA	GO:0005634|nucleus
pt2_01187	A	A1S	Potri.001G081300	Potri.001G081300(AS)	POPTR_0001s11620	NA	NA	AT1G80245.3	| Symbols: | Spc97 / Spc98 family of spindle pole body (SBP) component | chr1:30174547-30175217 FORWARD LENGTH=127	NA	NA	NA	NA	GO:0000226|microtubule cytoskeleton organization GO:0006626|protein targeting to mitochondrion	GO:0003674|molecular_function	NA
pt2_01188	A	A1S	Potri.001G081200	Potri.001G081200(AS)	POPTR_0001s11630	sp|Q9LNQ4|ALA4_ARATH	Putative phospholipid-transporting ATPase 4 OS=Arabidopsis thaliana GN=ALA4 PE=1 SV=2	AT1G17500.1	| Symbols: | ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein | chr1:6018757-6023201 FORWARD LENGTH=1216	LOC_Os06g36990.1	protein|phospholipid-transporting ATPase 4, putative, expressed	IMGA|Medtr5g037210.1	Phospholipid-translocating P-type ATPase flippase family protein chr5 15827138-15809797 E EGN_Mt100125 20111014	GO:0006812|cation transport GO:0008152|metabolic process GO:0015914|phospholipid transport	GO:0000166|nucleotide binding GO:0000287|magnesium ion binding GO:0003824|catalytic activity GO:0004012|phospholipid-translocating ATPase activity GO:0005524|ATP binding GO:0015662|ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism GO:0016820|hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances GO:0046872|metal ion binding	GO:0016020|membrane GO:0016021|integral to membrane
pt2_01189	A	A1S	Potri.001G081100	Potri.001G081100(AS)	POPTR_0001s11640	NA	NA	NA	NA	LOC_Os03g56620.1	protein|expressed protein	NA	NA	GO:0016051|carbohydrate biosynthetic process	GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups GO:0047262|polygalacturonate 4-alpha-galacturonosyltransferase activity	GO:0005794|Golgi apparatus GO:0090406|pollen tube
pt2_01190	A	A1S	Potri.001G081000	Potri.001G081000(AS)	POPTR_0001s11650	sp|Q06106|MRD1_YEAST	Multiple RNA-binding domain-containing protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MRD1 PE=1 SV=1	AT4G19610.1	| Symbols: | nucleotide binding;nucleic acid binding;RNA binding | chr4:10677482-10681623 FORWARD LENGTH=816	LOC_Os04g52200.1	protein|RNA recognition motif containing protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005634|nucleus GO:0005730|nucleolus
pt2_01191	A	A1S	Potri.001G080900	Potri.001G080900(AS)	POPTR_0001s11660	sp|Q9SK55|NAC42_ARATH	NAC domain-containing protein 42 OS=Arabidopsis thaliana GN=NAC042 PE=2 SV=1	AT2G43000.1	| Symbols: anac042, NAC042 | NAC domain containing protein 42 | chr2:17880617-17882584 REVERSE LENGTH=275	LOC_Os03g56580.1	protein|no apical meristem protein, putative, expressed	IMGA|Medtr5g090970.1	NAC domain protein IPR003441 chr5 38593767-38597396 F EGN_Mt100125 20111014	GO:0005992|trehalose biosynthetic process GO:0006561|proline biosynthetic process GO:0007275|multicellular organismal development GO:0009627|systemic acquired resistance GO:0009718|anthocyanin-containing compound biosynthetic process GO:0009723|response to ethylene stimulus GO:0010120|camalexin biosynthetic process GO:0010150|leaf senescence GO:0034976|response to endoplasmic reticulum stress GO:0042538|hyperosmotic salinity response GO:1900056|negative regulation of leaf senescence	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01192	C	C1S	Potri.001G080800	Potri.001G080800(CS)	NA	NA	NA	NA	LOC_Os09g29700.1	protein|retrotransposon protein, putative, unclassified, expressed	NA	NA	NA	NA	NA
pt2_01193	A	A1S	Potri.001G080700	Potri.001G080700(AS)	POPTR_0001s11680	sp|Q41001|BCP_PEA	Blue copper protein OS=Pisum sativum PE=2 SV=1	AT5G07475.1	| Symbols: | Cupredoxin superfamily protein | chr5:2364827-2365536 REVERSE LENGTH=192	LOC_Os04g46120.1	protein|plastocyanin-like domain containing protein, putative, expressed	IMGA|Medtr1g090190.1	Blue copper protein chr1 24861169-24860250 H EGN_Mt100125 20111014	NA	GO:0005507|copper ion binding GO:0009055|electron carrier activity	GO:0005886|plasma membrane GO:0031225|anchored to membrane
pt2_01194	A	A1S	Potri.001G080600	Potri.001G080600(AS)	POPTR_0001s11690	sp|Q39224|SRG1_ARATH	Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1	AT5G07480.1	| Symbols: KUOX1 | KAR-UP oxidoreductase 1 | chr5:2367167-2369554 FORWARD LENGTH=340	LOC_Os04g57160.2	protein|flavonol synthase/flavanone 3-hydroxylase, putative, expressed	IMGA|Medtr5g065010.1	Gibberellin 3-beta-dioxygenase chr5 26345931-26349139 F EGN_Mt100125 20111014	GO:0009813|flavonoid biosynthetic process GO:0055114|oxidation-reduction process GO:0080167|response to karrikin	GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_01195	A	A1S	Potri.001G080500	Potri.001G080500(AS)	POPTR_0001s11700	NA	NA	AT5G61630.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G07490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:24773803-24774502 REVERSE LENGTH=147	NA	NA	IMGA|Medtr1g090200.1	hypothetical protein chr1 24863389-24862496 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_01196	C	C1S	Potri.001G080400	Potri.001G080400(CS)	sp|Q05737|YPTM2_MAIZE	GTP-binding protein YPTM2 OS=Zea mays GN=YPTM2 PE=2 SV=1	AT1G02130.1	| Symbols: ATRAB1B, ARA5, ARA-5, ATRABD2A, RABD2A, RA-5 | RAS 5 | chr1:400350-401788 REVERSE LENGTH=203	LOC_Os01g08450.1	protein|ras-related protein, putative, expressed	IMGA|Medtr1g068730.1	Ras-like protein chr1 17072901-17066690 F EGN_Mt100125 20111014	GO:0006888|ER to Golgi vesicle-mediated transport GO:0007264|small GTPase mediated signal transduction GO:0015031|protein transport GO:0046686|response to cadmium ion	GO:0005525|GTP binding	GO:0000139|Golgi membrane GO:0005773|vacuole GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0032588|trans-Golgi network membrane
pt2_01197	A	A1S	Potri.001G080400	Potri.001G080400(AS)	POPTR_0001s11720	sp|Q05737|YPTM2_MAIZE	GTP-binding protein YPTM2 OS=Zea mays GN=YPTM2 PE=2 SV=1	AT1G02130.1	| Symbols: ATRAB1B, ARA5, ARA-5, ATRABD2A, RABD2A, RA-5 | RAS 5 | chr1:400350-401788 REVERSE LENGTH=203	LOC_Os01g08450.1	protein|ras-related protein, putative, expressed	IMGA|Medtr1g068730.1	Ras-like protein chr1 17072901-17066690 F EGN_Mt100125 20111014	GO:0006888|ER to Golgi vesicle-mediated transport GO:0007264|small GTPase mediated signal transduction GO:0015031|protein transport GO:0046686|response to cadmium ion	GO:0005525|GTP binding	GO:0000139|Golgi membrane GO:0005773|vacuole GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0032588|trans-Golgi network membrane
pt2_01198	A	A1S	Potri.001G080300	Potri.001G080300(AS)	POPTR_0001s11730	sp|Q2V9B0|MY1R1_SOLTU	Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1	AT5G61620.1	| Symbols: | myb-like transcription factor family protein | chr5:24772383-24773507 FORWARD LENGTH=317	LOC_Os10g41200.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr5g037080.1	DIV1B protein chr5 15763383-15765765 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003676|nucleic acid binding GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_01199	A	A2S	Potri.001G080200	Potri.001G080200(AS) Potri.003G150500(BS)	POPTR_0001s11740	sp|Q8L6Y4|EMF2_ARATH	Polycomb group protein EMBRYONIC FLOWER 2 OS=Arabidopsis thaliana GN=EMF2 PE=1 SV=2	AT5G51230.1	| Symbols: EMF2, VEF2, CYR1, AtEMF2 | VEFS-Box of polycomb protein | chr5:20824153-20829344 FORWARD LENGTH=631	LOC_Os09g13630.1	protein|ZOS9-03 - C2H2 zinc finger protein, expressed	IMGA|Medtr5g013150.1	Polycomb group protein EMBRYONIC FLOWER chr5 3887150-3878756 E EGN_Mt100125 20111014	GO:0006349|regulation of gene expression by genetic imprinting GO:0009910|negative regulation of flower development GO:0010048|vernalization response GO:0016571|histone methylation	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_01200	R	R	NA	NA	POPTR_0001s11750	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01201	A	A1S	Potri.001G080000	Potri.001G080000(AS)	POPTR_0001s11760	sp|Q43804|OLEO1_PRUDU	Oleosin 1 OS=Prunus dulcis GN=OLE1 PE=2 SV=1	AT4G25140.1	| Symbols: OLEO1, OLE1 | oleosin 1 | chr4:12900498-12901259 FORWARD LENGTH=173	LOC_Os04g46200.1	protein|oleosin, putative, expressed	IMGA|Medtr1g090250.1	Oleosin chr1 24885928-24885225 F EGN_Mt100125 20111014	GO:0006406|mRNA export from nucleus GO:0006606|protein import into nucleus GO:0009640|photomorphogenesis GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009909|regulation of flower development GO:0009933|meristem structural organization GO:0010162|seed dormancy process GO:0010182|sugar mediated signaling pathway GO:0010228|vegetative to reproductive phase transition of meristem GO:0010344|seed oilbody biogenesis GO:0016567|protein ubiquitination GO:0019915|lipid storage GO:0050826|response to freezing	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0016020|membrane
pt2_01202	A	A1S	Potri.001G079900	Potri.001G079900(AS)	POPTR_0001s11770	sp|Q40479|ERF2_TOBAC	Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum GN=ERF2 PE=2 SV=1	AT4G17500.1	| Symbols: ATERF-1, ERF-1 | ethylene responsive element binding factor 1 | chr4:9759405-9760211 FORWARD LENGTH=268	LOC_Os02g43790.1	protein|ethylene-responsive transcription factor, putative, expressed	IMGA|AC233556_27.1	Ethylene-responsive transcription factor AC233556.3 105457-106057 H EGN_Mt100125 20111014	GO:0002679|respiratory burst involved in defense response GO:0006355|regulation of transcription, DNA-dependent GO:0009414|response to water deprivation GO:0009723|response to ethylene stimulus GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009873|ethylene mediated signaling pathway GO:0010200|response to chitin GO:0035556|intracellular signal transduction GO:0042538|hyperosmotic salinity response GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus GO:0005643|nuclear pore
pt2_01203	A	A1S	Potri.001G079800	Potri.001G079800(AS)	POPTR_0001s11780	sp|Q8VY90|EF105_ARATH	Ethylene-responsive transcription factor ERF105 OS=Arabidopsis thaliana GN=ERF105 PE=2 SV=1	AT5G51190.1	| Symbols: | Integrase-type DNA-binding superfamily protein | chr5:20800708-20801373 REVERSE LENGTH=221	LOC_Os04g46240.1	protein|AP2 domain containing protein, expressed	IMGA|AC233556_27.1	Ethylene-responsive transcription factor AC233556.3 105457-106057 H EGN_Mt100125 20111014	GO:0002679|respiratory burst involved in defense response GO:0006355|regulation of transcription, DNA-dependent GO:0009611|response to wounding GO:0009612|response to mechanical stimulus GO:0010200|response to chitin GO:0035556|intracellular signal transduction	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_01204	C	C1S	Potri.001G079700	Potri.001G079700(CS)	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0008270|zinc ion binding	GO:0005575|cellular_component
pt2_01205	A	A1S	Potri.001G079600	Potri.001G079600(AS)	POPTR_0001s11800	sp|Q9LY05|EF106_ARATH	Ethylene-responsive transcription factor ERF106 OS=Arabidopsis thaliana GN=ERF106 PE=2 SV=1	AT5G07580.1	| Symbols: | Integrase-type DNA-binding superfamily protein | chr5:2399525-2400349 FORWARD LENGTH=274	LOC_Os04g46240.1	protein|AP2 domain containing protein, expressed	IMGA|AC233556_27.1	Ethylene-responsive transcription factor AC233556.3 105457-106057 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009873|ethylene mediated signaling pathway	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_01206	C	C1S	Potri.001G079500	Potri.001G079500(CS)	sp|Q9FKG3|K6PF4_ARATH	6-phosphofructokinase 4, chloroplastic OS=Arabidopsis thaliana GN=PFK4 PE=1 SV=1	AT5G61580.2	| Symbols: PFK4 | phosphofructokinase 4 | chr5:24761150-24763827 FORWARD LENGTH=529	LOC_Os01g09570.1	protein|6-phosphofructokinase, putative, expressed	IMGA|AC233556_26.1	6-phosphofructokinase AC233556.3 96863-104424 H EGN_Mt100125 20111014	GO:0006096|glycolysis	GO:0003872|6-phosphofructokinase activity GO:0005524|ATP binding	GO:0005945|6-phosphofructokinase complex GO:0009507|chloroplast
pt2_01207	C	C1S	Potri.001G079500	Potri.001G079500(CS)	sp|Q9FKG3|K6PF4_ARATH	6-phosphofructokinase 4, chloroplastic OS=Arabidopsis thaliana GN=PFK4 PE=1 SV=1	AT5G61580.2	| Symbols: PFK4 | phosphofructokinase 4 | chr5:24761150-24763827 FORWARD LENGTH=529	LOC_Os01g09570.1	protein|6-phosphofructokinase, putative, expressed	IMGA|AC233556_26.1	6-phosphofructokinase AC233556.3 96863-104424 H EGN_Mt100125 20111014	GO:0006096|glycolysis	GO:0003872|6-phosphofructokinase activity GO:0005524|ATP binding	GO:0005945|6-phosphofructokinase complex GO:0009507|chloroplast
pt2_01208	G	G1	NA	NA	POPTR_0001s11810	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01209	A	A1S	Potri.001G079400	Potri.001G079400(AS)	POPTR_0001s11820	sp|Q08448|YO059_YEAST	Putative lipase YOR059C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOR059C PE=1 SV=1	AT5G51180.2	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr5:20797360-20799929 FORWARD LENGTH=357	LOC_Os08g04810.1	protein|serine esterase family protein, putative, expressed	NA	NA	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_01210	G	G1	NA	NA	POPTR_0001s11825	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01211	A	A1S	Potri.001G079300	Potri.001G079300(AS)	POPTR_0001s11830	sp|O22161|ADLO1_ARATH	Protein ARABIDILLO 1 OS=Arabidopsis thaliana GN=FBX5 PE=1 SV=1	AT2G44900.1	| Symbols: ARABIDILLO-1, ARABIDILLO1 | ARABIDILLO-1 | chr2:18511719-18515762 REVERSE LENGTH=930	LOC_Os10g41360.1	protein|ARABIDILLO-1, putative, expressed	IMGA|contig_49679_2.1	U-box domain-containing protein contig_49679 4807-2474 E PREDN 20111014	GO:0048527|lateral root development	GO:0004842|ubiquitin-protein ligase activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_01212	A	A1S	Potri.001G079100	Potri.001G079100(AS)	POPTR_0001s11850	sp|Q9P2S5|WRP73_HUMAN	WD repeat-containing protein WRAP73 OS=Homo sapiens GN=WRAP73 PE=2 SV=1	AT5G07590.1	| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr5:2401712-2403731 REVERSE LENGTH=458	LOC_Os10g41370.1	protein|WD repeat-containing protein 8, putative, expressed	IMGA|Medtr1g090310.1	WD-repeat protein chr1 24915696-24910493 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005737|cytoplasm GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_01213	A	A1S	Potri.001G079000	Potri.001G079000(AS)	POPTR_0001s11860	sp|Q8RWS6|FRO6_ARATH	Ferric reduction oxidase 6 OS=Arabidopsis thaliana GN=FRO6 PE=2 SV=1	AT5G49730.1	| Symbols: ATFRO6, FRO6 | ferric reduction oxidase 6 | chr5:20201355-20204455 REVERSE LENGTH=738	LOC_Os04g36720.1	protein|ferric-chelate reductase, putative, expressed	IMGA|Medtr1g100130.1	Ferric-chelate reductase chr1 29126613-29132846 E EGN_Mt100125 20111014	GO:0009416|response to light stimulus GO:0009767|photosynthetic electron transport chain GO:0055114|oxidation-reduction process	GO:0000293|ferric-chelate reductase activity GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016491|oxidoreductase activity GO:0050660|flavin adenine dinucleotide binding	GO:0005634|nucleus GO:0005886|plasma membrane GO:0009507|chloroplast GO:0016020|membrane GO:0016021|integral to membrane
pt2_01214	A	A1S	Potri.001G079000	Potri.001G079000(AS)	POPTR_0001s11860	sp|Q8RWS6|FRO6_ARATH	Ferric reduction oxidase 6 OS=Arabidopsis thaliana GN=FRO6 PE=2 SV=1	AT5G49730.1	| Symbols: ATFRO6, FRO6 | ferric reduction oxidase 6 | chr5:20201355-20204455 REVERSE LENGTH=738	LOC_Os04g36720.1	protein|ferric-chelate reductase, putative, expressed	IMGA|Medtr1g100130.1	Ferric-chelate reductase chr1 29126613-29132846 E EGN_Mt100125 20111014	GO:0009416|response to light stimulus GO:0009767|photosynthetic electron transport chain GO:0055114|oxidation-reduction process	GO:0000293|ferric-chelate reductase activity GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016491|oxidoreductase activity GO:0050660|flavin adenine dinucleotide binding	GO:0005634|nucleus GO:0005886|plasma membrane GO:0009507|chloroplast GO:0016020|membrane GO:0016021|integral to membrane
pt2_01215	A	A1S	Potri.001G079000	Potri.001G079000(AS)	POPTR_0001s11860	sp|Q8RWS6|FRO6_ARATH	Ferric reduction oxidase 6 OS=Arabidopsis thaliana GN=FRO6 PE=2 SV=1	AT5G49730.1	| Symbols: ATFRO6, FRO6 | ferric reduction oxidase 6 | chr5:20201355-20204455 REVERSE LENGTH=738	LOC_Os04g36720.1	protein|ferric-chelate reductase, putative, expressed	IMGA|Medtr1g100130.1	Ferric-chelate reductase chr1 29126613-29132846 E EGN_Mt100125 20111014	GO:0009416|response to light stimulus GO:0009767|photosynthetic electron transport chain GO:0055114|oxidation-reduction process	GO:0000293|ferric-chelate reductase activity GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016491|oxidoreductase activity GO:0050660|flavin adenine dinucleotide binding	GO:0005634|nucleus GO:0005886|plasma membrane GO:0009507|chloroplast GO:0016020|membrane GO:0016021|integral to membrane
pt2_01216	A	A1S	Potri.001G079000	Potri.001G079000(AS)	POPTR_0001s11860	sp|Q8RWS6|FRO6_ARATH	Ferric reduction oxidase 6 OS=Arabidopsis thaliana GN=FRO6 PE=2 SV=1	AT5G49730.1	| Symbols: ATFRO6, FRO6 | ferric reduction oxidase 6 | chr5:20201355-20204455 REVERSE LENGTH=738	LOC_Os04g36720.1	protein|ferric-chelate reductase, putative, expressed	IMGA|Medtr1g100130.1	Ferric-chelate reductase chr1 29126613-29132846 E EGN_Mt100125 20111014	GO:0009416|response to light stimulus GO:0009767|photosynthetic electron transport chain GO:0055114|oxidation-reduction process	GO:0000293|ferric-chelate reductase activity GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016491|oxidoreductase activity GO:0050660|flavin adenine dinucleotide binding	GO:0005634|nucleus GO:0005886|plasma membrane GO:0009507|chloroplast GO:0016020|membrane GO:0016021|integral to membrane
pt2_01217	A	A2S	Potri.001G078900	Potri.001G078900(AS) Potri.003G151700(DS)	POPTR_0001s11870	sp|Q38890|GUN25_ARATH	Endoglucanase 25 OS=Arabidopsis thaliana GN=KOR PE=1 SV=1	AT5G49720.1	| Symbols: ATGH9A1, TSD1, DEC, KOR, RSW2, IRX2, KOR1, GH9A1 | glycosyl hydrolase 9A1 | chr5:20197765-20200168 REVERSE LENGTH=621	LOC_Os03g21210.1	protein|endoglucanase, putative, expressed	IMGA|Medtr5g085730.1	Endoglucanase chr5 36028973-36032829 E EGN_Mt100125 20111014	GO:0000271|polysaccharide biosynthetic process GO:0000902|cell morphogenesis GO:0005975|carbohydrate metabolic process GO:0006096|glycolysis GO:0006833|water transport GO:0006972|hyperosmotic response GO:0007030|Golgi organization GO:0009266|response to temperature stimulus GO:0009651|response to salt stress GO:0009734|auxin mediated signaling pathway GO:0009735|response to cytokinin stimulus GO:0009750|response to fructose stimulus GO:0009825|multidimensional cell growth GO:0009826|unidimensional cell growth GO:0009932|cell tip growth GO:0010193|response to ozone GO:0010817|regulation of hormone levels GO:0016049|cell growth GO:0016051|carbohydrate biosynthetic process GO:0019344|cysteine biosynthetic process GO:0030243|cellulose metabolic process GO:0030244|cellulose biosynthetic process GO:0032880|regulation of protein localization GO:0042538|hyperosmotic salinity response GO:0042744|hydrogen peroxide catabolic process GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0043622|cortical microtubule organization GO:0046686|response to cadmium ion GO:0048193|Golgi vesicle transport GO:0048367|shoot development GO:0048765|root hair cell differentiation GO:0048767|root hair elongation GO:0071555|cell wall organization	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0008810|cellulase activity	GO:0005768|endosome GO:0005769|early endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0005886|plasma membrane GO:0009504|cell plate
pt2_01218	A	A1S	Potri.001G078800	Potri.001G078800(AS)	POPTR_0001s11880	sp|Q94KB2|MLO13_ARATH	MLO-like protein 13 OS=Arabidopsis thaliana GN=MLO13 PE=2 SV=1	AT4G24250.1	| Symbols: MLO13, ATMLO13 | Seven transmembrane MLO family protein | chr4:12575008-12577517 REVERSE LENGTH=478	LOC_Os01g66510.1	protein|MLO domain containing protein, putative, expressed	IMGA|Medtr5g024700.1	Mlo family protein chr5 9668004-9673094 H EGN_Mt100125 20111014	GO:0006952|defense response GO:0008219|cell death	GO:0005516|calmodulin binding	GO:0005886|plasma membrane GO:0016021|integral to membrane
pt2_01219	A	A1S	Potri.001G078700	Potri.001G078700(AS)	POPTR_0001s11890	NA	NA	AT2G02370.2	| Symbols: | SNARE associated Golgi protein family | chr2:621841-623084 FORWARD LENGTH=320	LOC_Os03g25750.1	protein|SNARE associated Golgi protein, putative, expressed	IMGA|Medtr5g011420.1	TVP38/TMEM64 family membrane protein slr0305 chr5 3031173-3029607 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005886|plasma membrane
pt2_01220	A	A1S	Potri.001G078600	Potri.001G078600(AS)	POPTR_0001s11900	sp|Q9Z0W3|NU160_MOUSE	Nuclear pore complex protein Nup160 OS=Mus musculus GN=Nup160 PE=1 SV=2	AT1G33410.2	| Symbols: SAR1 | SUPPRESSOR OF AUXIN RESISTANCE1 | chr1:12109769-12118828 REVERSE LENGTH=1504	LOC_Os02g04970.1	protein|expressed protein	NA	NA	GO:0006406|mRNA export from nucleus GO:0006606|protein import into nucleus GO:0009733|response to auxin stimulus GO:0009909|regulation of flower development GO:0010074|maintenance of meristem identity GO:0016570|histone modification GO:0032502|developmental process GO:0048449|floral organ formation	GO:0005515|protein binding	GO:0005634|nucleus GO:0005635|nuclear envelope GO:0031965|nuclear membrane
pt2_01221	C	C1S	Potri.001G078500	Potri.001G078500(CS)	sp|Q8GWR0|COX11_ARATH	Cytochrome c oxidase assembly protein COX11, mitochondrial OS=Arabidopsis thaliana GN=COX11 PE=2 SV=1	AT1G02410.1	| Symbols: | cytochrome c oxidase assembly protein CtaG / Cox11 family | chr1:491300-492762 FORWARD LENGTH=287	LOC_Os03g50940.1	protein|cytochrome c oxidase assembly protein COX11, mitochondrial precursor, putative, expressed	NA	NA	GO:0008150|biological_process GO:0019243|methylglyoxal catabolic process to D-lactate	GO:0005507|copper ion binding	GO:0009507|chloroplast
pt2_01222	A	A1S	Potri.001G078400	Potri.001G078400(AS)	POPTR_0001s11920	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01223	A	A1S	Potri.001G078300	Potri.001G078300(AS)	POPTR_0001s11930	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01224	C	C1S	Potri.001G078200	Potri.001G078200(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01225	A	A1S	Potri.001G078100	Potri.001G078100(AS)	POPTR_0001s11950	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01226	A	A1S	Potri.001G077900	Potri.001G077900(AS)	POPTR_0001s11960	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01227	A	A2S	Potri.001G077700	Potri.001G077700(AS) Potri.001G077800(AA)	POPTR_0001s11970	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01228	A	A1S	Potri.001G077800	Potri.001G077800(AS)	POPTR_0001s11980	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01229	A	A1S	Potri.001G077600	Potri.001G077600(AS)	POPTR_0001s11990	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01230	A	A1S	Potri.001G077600	Potri.001G077600(AS)	POPTR_0001s11990	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01231	A	A1S	Potri.001G077600	Potri.001G077600(AS)	POPTR_0001s11990	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01232	A	A1S	Potri.001G077500	Potri.001G077500(AS)	POPTR_0001s12000	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01233	A	A1S	Potri.001G077400	Potri.001G077400(AS)	POPTR_0001s12010	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01234	A	A1S	Potri.T154300	Potri.T154300(AS)	POPTR_0001s12020	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01235	A	A2S	Potri.T154400	Potri.T154400(AS) Potri.001G077200(DS)	POPTR_0001s12030	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01236	A	A2S	Potri.001G077100	Potri.001G077100(AS) Potri.T154500(BS)	POPTR_0001s12040	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01237	A	A1S	Potri.T154600	Potri.T154600(AS)	POPTR_0001s12070	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01238	B	B1S	Potri.001G076900	Potri.001G076900(BS)	POPTR_0001s12080	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01239	A	A1S	Potri.001G076800	Potri.001G076800(AS)	POPTR_0001s12090	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01240	C	C2S	Potri.T154600	Potri.T154600(CS) Potri.001G077000(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01241	A	A1S	Potri.001G076700	Potri.001G076700(AS)	POPTR_0001s12110	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01242	A	A1S	Potri.001G076600	Potri.001G076600(AS)	POPTR_0001s12120	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01243	A	A1S	Potri.001G076500	Potri.001G076500(AS)	POPTR_0001s12140	NA	NA	NA	NA	NA	NA	NA	NA	GO:0007093|mitotic cell cycle checkpoint GO:0009630|gravitropism	NA	GO:0005634|nucleus GO:0005635|nuclear envelope
pt2_01244	A	A1S	Potri.001G076400	Potri.001G076400(AS)	POPTR_0001s12150	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01245	A	A1S	Potri.001G076400	Potri.001G076400(AS)	POPTR_0001s12150	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01246	A	A1S	Potri.001G076400	Potri.001G076400(AS)	POPTR_0001s12150	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01247	A	A1S	Potri.001G076300	Potri.001G076300(AS)	POPTR_0001s12160	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01248	A	A1S	Potri.001G076200	Potri.001G076200(AS)	POPTR_0001s12170	sp|Q32L81|TAM41_BOVIN	Mitochondrial translocator assembly and maintenance protein 41 homolog OS=Bos taurus GN=TAMM41 PE=2 SV=1	AT3G47630.2	| Symbols: | CONTAINS InterPro DOMAIN/s: Mitochondrial matrix Mmp37 (InterPro:IPR015222); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr3:17563254-17565162 REVERSE LENGTH=332	LOC_Os11g34840.1	protein|MMP37-like protein, mitochondrial precursor, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_01249	A	A1S	Potri.001G076100	Potri.001G076100(AS)	POPTR_0001s12180	sp|O64759|CAAT5_ARATH	Cationic amino acid transporter 5 OS=Arabidopsis thaliana GN=CAT5 PE=1 SV=1	AT2G34960.1	| Symbols: CAT5 | cationic amino acid transporter 5 | chr2:14744175-14745884 REVERSE LENGTH=569	LOC_Os01g11160.1	protein|amino acid permease family protein, putative, expressed	NA	NA	GO:0003333|amino acid transmembrane transport GO:0043091|L-arginine import GO:0051938|L-glutamate import	GO:0005313|L-glutamate transmembrane transporter activity GO:0015171|amino acid transmembrane transporter activity GO:0015181|arginine transmembrane transporter activity GO:0015189|L-lysine transmembrane transporter activity GO:0015326|cationic amino acid transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_01250	A	A1S	Potri.001G075900	Potri.001G075900(AS)	POPTR_0001s12190	sp|O49436|PP327_ARATH	Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana GN=EMB1025 PE=2 SV=1	AT4G20090.1	| Symbols: EMB1025 | Pentatricopeptide repeat (PPR) superfamily protein | chr4:10868400-10870382 REVERSE LENGTH=660	LOC_Os06g30420.1	protein|PPR repeat domain containing protein, putative, expressed	IMGA|Medtr5g090170.1	Auxin response factor chr5 38240367-38247794 E EGN_Mt100125 20111014	GO:0009793|embryo development ending in seed dormancy	NA	GO:0005739|mitochondrion
pt2_01251	A	A1S	Potri.001G075800	Potri.001G075800(AS)	POPTR_0001s12200	sp|Q7Y211|PP285_ARATH	Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2 SV=2	AT3G57430.1	| Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:21255731-21258403 REVERSE LENGTH=890	LOC_Os04g02850.1	protein|pentatricopeptide, putative, expressed	IMGA|Medtr1g071240.1	Pentatricopeptide repeat-containing protein chr1 17511913-17505644 H EGN_Mt100125 20111014	GO:0031425|chloroplast RNA processing	NA	GO:0009507|chloroplast
pt2_01252	A	A1S	Potri.001G075700	Potri.001G075700(AS)	POPTR_0001s12210	NA	NA	AT4G20090.1	| Symbols: EMB1025 | Pentatricopeptide repeat (PPR) superfamily protein | chr4:10868400-10870382 REVERSE LENGTH=660	LOC_Os01g43010.2	protein|transposon protein, putative, unclassified, expressed	NA	NA	GO:0009793|embryo development ending in seed dormancy	NA	GO:0005739|mitochondrion
pt2_01253	A	A1S	Potri.001G075600	Potri.001G075600(AS)	POPTR_0001s12220	sp|Q9FYH7|VSR6_ARATH	Vacuolar-sorting receptor 6 OS=Arabidopsis thaliana GN=VSR6 PE=2 SV=3	AT1G30900.1	| Symbols: VSR6, VSR3;3, BP80-3;3 | VACUOLAR SORTING RECEPTOR 6 | chr1:10997275-11000543 FORWARD LENGTH=631	LOC_Os06g45380.1	protein|vacuolar-sorting receptor precursor, putative, expressed	IMGA|Medtr5g005100.1	Vacuolar-sorting receptor chr5 44556-48812 E EGN_Mt100125 20111014	GO:0006623|protein targeting to vacuole GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process GO:0009744|response to sucrose stimulus GO:0009749|response to glucose stimulus GO:0009750|response to fructose stimulus GO:0034976|response to endoplasmic reticulum stress	GO:0005509|calcium ion binding	GO:0005794|Golgi apparatus GO:0005887|integral to plasma membrane GO:0017119|Golgi transport complex
pt2_01254	A	A1S	Potri.001G075500	Potri.001G075500(AS)	POPTR_0001s12230	sp|Q9SCY2|FKB13_ARATH	Peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic OS=Arabidopsis thaliana GN=FKBP13 PE=1 SV=2	AT5G45680.1	| Symbols: ATFKBP13, FKBP13 | FK506-binding protein 13 | chr5:18530894-18532128 FORWARD LENGTH=208	LOC_Os06g45340.1	protein|peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed	IMGA|Medtr5g008680.1	FK506-binding protein chr5 1630949-1635538 F EGN_Mt100125 20111014	GO:0006457|protein folding GO:0006636|unsaturated fatty acid biosynthetic process GO:0010103|stomatal complex morphogenesis GO:0015995|chlorophyll biosynthetic process GO:0016117|carotenoid biosynthetic process GO:0018208|peptidyl-proline modification GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway	GO:0003755|peptidyl-prolyl cis-trans isomerase activity GO:0005515|protein binding GO:0005528|FK506 binding	GO:0009507|chloroplast GO:0009543|chloroplast thylakoid lumen GO:0016020|membrane GO:0031977|thylakoid lumen
pt2_01255	B	B1S	Potri.001G075400	Potri.001G075400(BS)	POPTR_0001s12240	sp|Q8LPH6|MYB86_ARATH	Transcription factor MYB86 OS=Arabidopsis thaliana GN=MYB86 PE=2 SV=1	AT3G12720.1	| Symbols: ATY53, ATMYB67, MYB67 | myb domain protein 67 | chr3:4043407-4044522 REVERSE LENGTH=307	LOC_Os07g31470.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr5g029840.1	Myb-like transcription factor chr5 12304553-12305846 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_01256	C	C1S	Potri.001G075300	Potri.001G075300(CS)	sp|Q58DC2|DCAF4_BOVIN	DDB1- and CUL4-associated factor 4 OS=Bos taurus GN=DCAF4 PE=2 SV=1	AT5G17370.1	| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr5:5721801-5724719 REVERSE LENGTH=529	LOC_Os07g01730.1	protein|WD-40 repeat family protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005737|cytoplasm GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_01257	A	A1S	Potri.001G075300	Potri.001G075300(AS)	POPTR_0001s12260	sp|Q58DC2|DCAF4_BOVIN	DDB1- and CUL4-associated factor 4 OS=Bos taurus GN=DCAF4 PE=2 SV=1	AT5G17370.1	| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr5:5721801-5724719 REVERSE LENGTH=529	LOC_Os07g01730.1	protein|WD-40 repeat family protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005737|cytoplasm GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_01258	A	A1S	Potri.001G075200	Potri.001G075200(AS)	POPTR_0001s12270	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01259	A	A1S	Potri.001G075100	Potri.001G075100(AS)	POPTR_0001s12275	sp|Q9SY33|PER7_ARATH	Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 SV=1	AT1G30870.1	| Symbols: | Peroxidase superfamily protein | chr1:10991535-10992885 FORWARD LENGTH=349	LOC_Os07g31610.1	protein|peroxidase precursor, putative, expressed	IMGA|Medtr5g021060.1	Peroxidase chr5 7821272-7822903 F EGN_Mt100125 20111014	GO:0006979|response to oxidative stress GO:0010054|trichoblast differentiation GO:0055114|oxidation-reduction process	GO:0004601|peroxidase activity GO:0020037|heme binding	GO:0005576|extracellular region
pt2_01260	A	A1S	Potri.001G075000	Potri.001G075000(AS)	POPTR_0001s12290	sp|C0LGQ5|GSO1_ARATH	LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1	AT4G20140.1	| Symbols: GSO1 | Leucine-rich repeat transmembrane protein kinase | chr4:10884220-10888045 FORWARD LENGTH=1249	LOC_Os07g31500.1	protein|leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed	IMGA|contig_79827_1.1	Receptor-like kinase contig_79827 4333-168 H PREDN 20111014	GO:0006468|protein phosphorylation GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway GO:0008544|epidermis development GO:0009790|embryo development	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	NA
pt2_01261	A	A1S	Potri.001G074900	Potri.001G074900(AS)	POPTR_0001s12300	NA	NA	AT4G20150.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plasma membrane, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:10888529-10889500 REVERSE LENGTH=81	LOC_Os07g31490.1	protein|expressed protein	NA	NA	GO:0006096|glycolysis GO:0006511|ubiquitin-dependent protein catabolic process GO:0008150|biological_process GO:0009060|aerobic respiration GO:0009853|photorespiration GO:0046686|response to cadmium ion GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0005747|mitochondrial respiratory chain complex I GO:0005774|vacuolar membrane GO:0009507|chloroplast
pt2_01262	A	A1S	Potri.001G074800	Potri.001G074800(AS)	POPTR_0001s12310	NA	NA	AT1G30860.1	| Symbols: | RING/U-box superfamily protein | chr1:10986696-10989246 REVERSE LENGTH=730	NA	NA	IMGA|contig_51431_1.1	Unknown protein contig_51431 194-5641 H PREDN 20111014	GO:0048610|cellular process involved in reproduction GO:0048868|pollen tube development	NA	GO:0005634|nucleus GO:0009507|chloroplast
pt2_01263	A	A1S	Potri.001G074700	Potri.001G074700(AS)	POPTR_0001s12320	sp|Q7VG78|GUAA_HELHP	Probable GMP synthase [glutamine-hydrolyzing] OS=Helicobacter hepaticus (strain ATCC 51449 / 3B1) GN=guaA PE=3 SV=1	AT5G44680.1	| Symbols: | DNA glycosylase superfamily protein | chr5:18024461-18025893 REVERSE LENGTH=353	LOC_Os01g58550.1	protein|methyladenine glycosylase, putative, expressed	IMGA|contig_87360_1.1	DNA-3-methyladenine glycosylase I contig_87360 1893-326 F PREDN 20111014	GO:0006281|DNA repair GO:0006284|base-excision repair GO:0009637|response to blue light GO:0010155|regulation of proton transport GO:0046777|protein autophosphorylation	GO:0003824|catalytic activity GO:0008725|DNA-3-methyladenine glycosylase activity	GO:0005634|nucleus
pt2_01264	A	A1S	Potri.001G074600	Potri.001G074600(AS)	POPTR_0001s12330	NA	NA	AT5G44670.1	| Symbols: | Domain of unknown function (DUF23) | chr5:18019209-18021266 REVERSE LENGTH=519	LOC_Os06g22330.1	protein|expressed protein	IMGA|contig_8834_1.1	Unknown protein contig_8834 2335-1041 E PREDN 20111014	GO:0008150|biological_process	NA	GO:0005737|cytoplasm GO:0005773|vacuole
pt2_01265	A	A1S	Potri.001G074500	Potri.001G074500(AS)	POPTR_0001s12340	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01266	R	R	NA	NA	POPTR_0001s12350	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01267	D	D1S	Potri.001G074200	Potri.001G074200(DS)	POPTR_0001s12360	NA	NA	AT5G44650.1	| Symbols: CEST, AtCEST | Encodes a chloroplast protein that induces tolerance to multiple environmental stresses and reduces photooxidative damage. | chr5:18013396-18015292 FORWARD LENGTH=280	LOC_Os01g58470.1	protein|expressed protein	NA	NA	GO:0009414|response to water deprivation GO:0009658|chloroplast organization GO:0010286|heat acclimation GO:0042538|hyperosmotic salinity response GO:0048564|photosystem I assembly GO:0080183|response to photooxidative stress	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009579|thylakoid
pt2_01268	A	A1S	Potri.001G074100	Potri.001G074100(AS)	POPTR_0001s12370	sp|Q9SY29|PUP4_ARATH	Probable purine permease 4 OS=Arabidopsis thaliana GN=PUP4 PE=2 SV=1	AT1G30840.2	| Symbols: PUP4 | purine permease 4 | chr1:10974581-10975729 FORWARD LENGTH=382	LOC_Os01g48800.1	protein|purine permease, putative, expressed	IMGA|Medtr5g065080.1	Purine permease chr5 26371801-26373742 H EGN_Mt100125 20111014	GO:0006863|purine nucleobase transport GO:0015931|nucleobase-containing compound transport	GO:0005345|purine nucleobase transmembrane transporter activity	GO:0016020|membrane
pt2_01269	A	A1S	Potri.001G074000	Potri.001G074000(AS)	POPTR_0001s12380	sp|Q7Q0Q1|MCM6_ANOGA	DNA replication licensing factor Mcm6 OS=Anopheles gambiae GN=Mcm6 PE=3 SV=3	AT5G44635.1	| Symbols: MCM6 | minichromosome maintenance (MCM2/3/5) family protein | chr5:18006431-18010542 REVERSE LENGTH=831	LOC_Os05g14590.1	protein|MCM6 - Putative minichromosome maintenance MCM complex subunit 6, expressed	NA	NA	GO:0006260|DNA replication GO:0006268|DNA unwinding involved in replication GO:0006270|DNA replication initiation GO:0008283|cell proliferation	GO:0003677|DNA binding GO:0005515|protein binding GO:0005524|ATP binding GO:0008094|DNA-dependent ATPase activity	GO:0000790|nuclear chromatin GO:0005634|nucleus
pt2_01270	A	A2S	Potri.001G073900	Potri.001G073900(AS) Potri.003G157100(BS)	POPTR_0001s12390	sp|Q0JPA6|SRS1_ORYSJ	Salt stress root protein RS1 OS=Oryza sativa subsp. japonica GN=Os01g0233000 PE=2 SV=1	AT4G20260.5	| Symbols: PCAP1 | plasma-membrane associated cation-binding protein 1 | chr4:10941593-10943120 FORWARD LENGTH=167	LOC_Os02g18410.1	protein|salt stress root protein RS1, putative, expressed	NA	NA	GO:0006499|N-terminal protein myristoylation GO:0006816|calcium ion transport GO:0006970|response to osmotic stress GO:0007030|Golgi organization GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009651|response to salt stress GO:0010350|cellular response to magnesium starvation GO:0018008|N-terminal peptidyl-glycine N-myristoylation GO:0031115|negative regulation of microtubule polymerization GO:0031117|positive regulation of microtubule depolymerization GO:0035865|cellular response to potassium ion GO:0042742|defense response to bacterium GO:0043622|cortical microtubule organization GO:0046686|response to cadmium ion GO:0048767|root hair elongation GO:0051511|negative regulation of unidimensional cell growth GO:0051592|response to calcium ion GO:0071219|cellular response to molecule of bacterial origin GO:0071280|cellular response to copper ion GO:0071281|cellular response to iron ion GO:0071286|cellular response to magnesium ion GO:0071325|cellular response to mannitol stimulus GO:0071472|cellular response to salt stress GO:0072709|cellular response to sorbitol GO:0075733|intracellular transport of viral material	GO:0005507|copper ion binding GO:0005509|calcium ion binding GO:0005515|protein binding GO:0005516|calmodulin binding GO:0005546|phosphatidylinositol-4,5-bisphosphate binding GO:0005547|phosphatidylinositol-3,4,5-trisphosphate binding GO:0008017|microtubule binding GO:0043325|phosphatidylinositol-3,4-bisphosphate binding GO:0080025|phosphatidylinositol-3,5-bisphosphate binding	GO:0005773|vacuole GO:0005881|cytoplasmic microtubule GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0009507|chloroplast GO:0046658|anchored to plasma membrane
pt2_01271	A	A1S	Potri.001G073800	Potri.001G073800(AS)	POPTR_0001s12400	sp|Q84XV2|GTE1_ARATH	Transcription factor GTE1 OS=Arabidopsis thaliana GN=GTE1 PE=2 SV=1	AT2G34900.1	| Symbols: GTE01, IMB1, GTE1 | Transcription factor GTE6 | chr2:14723333-14725562 REVERSE LENGTH=386	LOC_Os06g04640.1	protein|bromodomain domain containing protein, expressed	IMGA|Medtr5g069490.1	Bromodomain-containing protein chr5 28476109-28480567 H EGN_Mt100125 20111014	GO:0000398|mRNA splicing, via spliceosome GO:0009560|embryo sac egg cell differentiation GO:0010030|positive regulation of seed germination GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003677|DNA binding	GO:0005634|nucleus
pt2_01272	A	A1S	Potri.001G073700	Potri.001G073700(AS)	POPTR_0001s12410	sp|Q9Y5N5|HEMK2_HUMAN	HemK methyltransferase family member 2 OS=Homo sapiens GN=N6AMT1 PE=1 SV=3	AT3G13440.1	| Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr3:4378338-4379347 FORWARD LENGTH=278	LOC_Os03g60920.1	protein|Methyltransferase small domain containing protein, expressed	NA	NA	GO:0015946|methanol oxidation GO:0019415|acetate biosynthetic process from carbon monoxide GO:0032259|methylation	GO:0003676|nucleic acid binding GO:0008168|methyltransferase activity	GO:0005737|cytoplasm
pt2_01273	A	A1S	Potri.001G073600	Potri.001G073600(AS)	POPTR_0001s12420	sp|O65440|BAME3_ARATH	Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 OS=Arabidopsis thaliana GN=BAM3 PE=2 SV=3	AT4G20270.1	| Symbols: BAM3 | Leucine-rich receptor-like protein kinase family protein | chr4:10949822-10952924 FORWARD LENGTH=992	LOC_Os03g56270.2	protein|receptor protein kinase CLAVATA1 precursor, putative, expressed	IMGA|Medtr5g090100.1	Receptor-like protein kinase chr5 38189654-38185879 E EGN_Mt100125 20111014	GO:0000271|polysaccharide biosynthetic process GO:0006468|protein phosphorylation GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway GO:0009825|multidimensional cell growth GO:0009855|determination of bilateral symmetry GO:0009932|cell tip growth GO:0010014|meristem initiation GO:0010073|meristem maintenance GO:0010075|regulation of meristem growth GO:0010817|regulation of hormone levels GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0048437|floral organ development GO:0048653|anther development GO:0048767|root hair elongation GO:0071555|cell wall organization	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_01274	A	A1S	Potri.001G073500	Potri.001G073500(AS)	POPTR_0001s12430	sp|Q54XM9|TAF11_DICDI	Transcription initiation factor TFIID subunit 11 OS=Dictyostelium discoideum GN=taf11 PE=3 SV=1	AT4G20280.1	| Symbols: TAF11 | TBP-associated factor 11 | chr4:10953792-10954664 FORWARD LENGTH=210	LOC_Os01g48810.1	protein|transcription initiation factor TFIID subunit 11, putative, expressed	IMGA|contig_102913_1.1	Transcription initiation factor TFIID subunit contig_102913 1347-219 E PREDN 20111014	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0006351|transcription, DNA-dependent GO:0006366|transcription from RNA polymerase II promoter GO:0006367|transcription initiation from RNA polymerase II promoter GO:0009086|methionine biosynthetic process	GO:0003677|DNA binding	GO:0005634|nucleus
pt2_01275	A	A1S	Potri.001G073400	Potri.001G073400(AS)	POPTR_0001s12440	NA	NA	AT4G20300.2	| Symbols: | Protein of unknown function (DUF1639) | chr4:10955813-10958865 FORWARD LENGTH=352	LOC_Os01g48830.2	protein|expressed protein	IMGA|Medtr5g055990.1	hypothetical protein chr5 22530878-22528382 I EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005739|mitochondrion
pt2_01276	A	A2S	Potri.001G073300	Potri.001G073300(AS) Potri.003G157700(DS)	POPTR_0001s12450	sp|Q8WTM6|ARPC2_CAEEL	Probable actin-related protein 2/3 complex subunit 2 OS=Caenorhabditis elegans GN=arx-4 PE=2 SV=1	AT1G30825.1	| Symbols: ARPC2A, DIS2 | Arp2/3 complex, 34 kD subunit p34-Arc | chr1:10961106-10962999 FORWARD LENGTH=318	LOC_Os01g46580.1	protein|actin-related protein 2/3 complex subunit 2, putative, expressed	IMGA|Medtr1g045070.1	Actin-related protein 2/3 complex subunit chr1 13364911-13362376 H EGN_Mt100125 20111014	GO:0007015|actin filament organization GO:0010090|trichome morphogenesis GO:0030833|regulation of actin filament polymerization	GO:0005198|structural molecule activity	GO:0005856|cytoskeleton GO:0005885|Arp2/3 protein complex
pt2_01277	A	A2S	Potri.001G073300	Potri.001G073300(AS) Potri.003G157700(DS)	POPTR_0001s12450	sp|Q8WTM6|ARPC2_CAEEL	Probable actin-related protein 2/3 complex subunit 2 OS=Caenorhabditis elegans GN=arx-4 PE=2 SV=1	AT1G30825.1	| Symbols: ARPC2A, DIS2 | Arp2/3 complex, 34 kD subunit p34-Arc | chr1:10961106-10962999 FORWARD LENGTH=318	LOC_Os01g46580.1	protein|actin-related protein 2/3 complex subunit 2, putative, expressed	IMGA|Medtr1g045070.1	Actin-related protein 2/3 complex subunit chr1 13364911-13362376 H EGN_Mt100125 20111014	GO:0007015|actin filament organization GO:0010090|trichome morphogenesis GO:0030833|regulation of actin filament polymerization	GO:0005198|structural molecule activity	GO:0005856|cytoskeleton GO:0005885|Arp2/3 protein complex
pt2_01278	A	A2S	Potri.001G073300	Potri.001G073300(AS) Potri.003G157700(BS)	POPTR_0001s12450	sp|Q8WTM6|ARPC2_CAEEL	Probable actin-related protein 2/3 complex subunit 2 OS=Caenorhabditis elegans GN=arx-4 PE=2 SV=1	AT1G30825.1	| Symbols: ARPC2A, DIS2 | Arp2/3 complex, 34 kD subunit p34-Arc | chr1:10961106-10962999 FORWARD LENGTH=318	LOC_Os01g46580.1	protein|actin-related protein 2/3 complex subunit 2, putative, expressed	IMGA|Medtr1g045070.1	Actin-related protein 2/3 complex subunit chr1 13364911-13362376 H EGN_Mt100125 20111014	GO:0007015|actin filament organization GO:0010090|trichome morphogenesis GO:0030833|regulation of actin filament polymerization	GO:0005198|structural molecule activity	GO:0005856|cytoskeleton GO:0005885|Arp2/3 protein complex
pt2_01279	A	A1S	Potri.001G073200	Potri.001G073200(AS)	POPTR_0001s12460	NA	NA	AT4G20310.1	| Symbols: | Peptidase M50 family protein | chr4:10961639-10963283 FORWARD LENGTH=393	LOC_Os01g46590.1	protein|expressed protein	NA	NA	GO:0006508|proteolysis	GO:0004222|metalloendopeptidase activity	GO:0005739|mitochondrion GO:0016020|membrane
pt2_01280	A	A2S	Potri.001G073100	Potri.001G073100(AS) Potri.003G157900(DS)	POPTR_0001s12470	sp|Q54V77|PYRG_DICDI	CTP synthase OS=Dictyostelium discoideum GN=ctps PE=3 SV=1	AT1G30820.1	| Symbols: | CTP synthase family protein | chr1:10945251-10948825 REVERSE LENGTH=600	LOC_Os01g43020.1	protein|CTP synthase, putative, expressed	NA	NA	GO:0006221|pyrimidine nucleotide biosynthetic process GO:0009218|pyrimidine ribonucleotide metabolic process	GO:0003883|CTP synthase activity	GO:0005737|cytoplasm
pt2_01281	A	A1S	Potri.001G073000	Potri.001G073000(AS)	POPTR_0001s12480	NA	NA	AT5G44590.1	| Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr5:17987591-17989227 FORWARD LENGTH=349	LOC_Os03g03470.3	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_01282	A	A1S	Potri.001G073000	Potri.001G073000(AS)	POPTR_0001s12480	NA	NA	AT5G44590.1	| Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr5:17987591-17989227 FORWARD LENGTH=349	LOC_Os03g03470.3	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_01283	A	A1S	Potri.001G072900	Potri.001G072900(AS)	POPTR_0001s12490	sp|Q8DHG3|SYW_THEEB	Tryptophan--tRNA ligase OS=Thermosynechococcus elongatus (strain BP-1) GN=trpS PE=3 SV=1	AT2G25840.3	| Symbols: OVA4 | Nucleotidylyl transferase superfamily protein | chr2:11021924-11025158 FORWARD LENGTH=396	LOC_Os01g54020.1	protein|tRNA synthetase, putative, expressed	NA	NA	GO:0006418|tRNA aminoacylation for protein translation GO:0006436|tryptophanyl-tRNA aminoacylation GO:0006499|N-terminal protein myristoylation GO:0009658|chloroplast organization GO:0009793|embryo development ending in seed dormancy GO:0010027|thylakoid membrane organization GO:0010228|vegetative to reproductive phase transition of meristem GO:0016226|iron-sulfur cluster assembly GO:0048481|ovule development	GO:0000166|nucleotide binding GO:0004812|aminoacyl-tRNA ligase activity GO:0004830|tryptophan-tRNA ligase activity GO:0005524|ATP binding	GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_01284	A	A1S	Potri.001G072800	Potri.001G072800(AS)	POPTR_0001s12500	sp|Q9STE8|TC753_ARATH	Protein TOC75-3, chloroplastic OS=Arabidopsis thaliana GN=TOC75-3 PE=1 SV=1	AT3G46740.1	| Symbols: TOC75-III, MAR1 | translocon at the outer envelope membrane of chloroplasts 75-III | chr3:17216104-17219296 REVERSE LENGTH=818	LOC_Os03g16440.1	protein|outer membrane protein, OMP85 family, putative, expressed	IMGA|Medtr5g013940.1	Protein TOC75 chr5 4347090-4344238 H EGN_Mt100125 20111014	GO:0009658|chloroplast organization GO:0045036|protein targeting to chloroplast GO:0045037|protein import into chloroplast stroma GO:0048481|ovule development GO:0048598|embryonic morphogenesis	GO:0015450|P-P-bond-hydrolysis-driven protein transmembrane transporter activity	GO:0005774|vacuolar membrane GO:0009507|chloroplast GO:0009536|plastid GO:0009941|chloroplast envelope GO:0010006|toc complex GO:0016020|membrane GO:0031359|integral to chloroplast outer membrane
pt2_01285	A	A1S	Potri.001G072700	Potri.001G072700(AS)	POPTR_0001s12510	sp|A8FFD1|DNAJ_BACP2	Chaperone protein DnaJ OS=Bacillus pumilus (strain SAFR-032) GN=dnaJ PE=3 SV=1	AT5G59610.1	| Symbols: | Chaperone DnaJ-domain superfamily protein | chr5:24013165-24014954 FORWARD LENGTH=268	LOC_Os03g60790.1	protein|heat shock protein DnaJ, putative, expressed	IMGA|Medtr5g035770.1	Chaperone protein dnaJ chr5 15132063-15127235 F EGN_Mt100125 20111014	GO:0006457|protein folding	GO:0031072|heat shock protein binding GO:0051082|unfolded protein binding	GO:0009507|chloroplast
pt2_01286	A	A1S	Potri.001G072600	Potri.001G072600(AS)	POPTR_0001s12520	NA	NA	AT5G11680.1	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WW-domain-binding protein (InterPro:IPR018826); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:3759463-3760634 FORWARD LENGTH=207	LOC_Os09g33800.1	protein|arabinogalactan protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005829|cytosol GO:0005886|plasma membrane
pt2_01287	A	A1S	Potri.001G072500	Potri.001G072500(AS)	POPTR_0001s12530	sp|Q9SSE8|GLYT1_ARATH	Probable glycosyltransferase At3g07620 OS=Arabidopsis thaliana GN=At3g07620 PE=3 SV=1	AT4G38040.1	| Symbols: | Exostosin family protein | chr4:17867501-17869131 FORWARD LENGTH=425	LOC_Os02g09430.1	protein|exostosin family domain containing protein, expressed	IMGA|Medtr5g031480.1	Exostosin-like protein chr5 13079105-13085686 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003824|catalytic activity	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0016020|membrane
pt2_01288	A	A1S	Potri.001G072400	Potri.001G072400(AS)	POPTR_0001s12540	NA	NA	AT5G47860.1	| Symbols: | Protein of unknown function (DUF1350) | chr5:19381656-19384310 FORWARD LENGTH=431	LOC_Os04g33280.2	protein|expressed protein	NA	NA	NA	NA	GO:0009507|chloroplast
pt2_01289	A	A2S	Potri.001G072300	Potri.001G072300(AS) Potri.003G158500(DS)	POPTR_0001s12550	NA	NA	AT5G47870.1	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: cobalt ion binding (TAIR:AT1G71310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:19384555-19385808 REVERSE LENGTH=199	LOC_Os03g63450.2	protein|snRK1-interacting protein 1, putative, expressed	IMGA|contig_114259_1.1	SnRK1-interacting protein contig_114259 3010-483 F PREDN 20111014	GO:0000724|double-strand break repair via homologous recombination	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_01290	A	A1S	Potri.001G072200	Potri.001G072200(AS)	POPTR_0001s12560	sp|Q5AYT7|FES1_EMENI	Hsp70 nucleotide exchange factor fes1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=fes1 PE=3 SV=1	AT3G51980.1	| Symbols: | ARM repeat superfamily protein | chr3:19285811-19287502 REVERSE LENGTH=382	LOC_Os09g33780.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	NA	GO:0005783|endoplasmic reticulum GO:0009507|chloroplast
pt2_01291	A	A1S	Potri.001G072100	Potri.001G072100(AS)	POPTR_0001s12570	sp|P43333|RU2A_ARATH	U2 small nuclear ribonucleoprotein A' OS=Arabidopsis thaliana GN=At1g09760 PE=2 SV=2	AT1G09760.1	| Symbols: U2A' | U2 small nuclear ribonucleoprotein A | chr1:3159476-3161603 REVERSE LENGTH=249	LOC_Os02g13990.1	protein|U2 small nuclear ribonucleoprotein A, putative, expressed	IMGA|contig_7939_2.1	U2 small nuclear ribonucleoprotein A contig_7939 5244-3418 E PREDN 20111014	GO:0000398|mRNA splicing, via spliceosome GO:0001510|RNA methylation GO:0009409|response to cold	NA	GO:0005634|nucleus GO:0005654|nucleoplasm GO:0005730|nucleolus GO:0005737|cytoplasm GO:0005829|cytosol GO:0009507|chloroplast GO:0015030|Cajal body
pt2_01292	A	A1S	Potri.001G072000	Potri.001G072000(AS)	POPTR_0001s12580	sp|P35614|ERF1Z_ARATH	Eukaryotic peptide chain release factor subunit 1-3 OS=Arabidopsis thaliana GN=ERF1-3 PE=2 SV=1	AT3G26618.1	| Symbols: ERF1-3 | eukaryotic release factor 1-3 | chr3:9788854-9790161 FORWARD LENGTH=435	LOC_Os03g49580.1	protein|eukaryotic peptide chain release factor subunit 1-1, putative, expressed	NA	NA	GO:0006415|translational termination	GO:0003747|translation release factor activity GO:0016149|translation release factor activity, codon specific	GO:0005737|cytoplasm
pt2_01293	C	C1S	Potri.001G071900	Potri.001G071900(CS)	sp|Q9FIJ2|NDUA2_ARATH	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Arabidopsis thaliana GN=At5g47890 PE=2 SV=1	AT5G47890.1	| Symbols: | NADH-ubiquinone oxidoreductase B8 subunit, putative | chr5:19388806-19390409 FORWARD LENGTH=97	LOC_Os04g24520.1	protein|ribosomal protein L51, putative, expressed	NA	NA	GO:0008150|biological_process GO:0009853|photorespiration	GO:0016655|oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor	GO:0005739|mitochondrion GO:0005747|mitochondrial respiratory chain complex I GO:0009507|chloroplast
pt2_01294	A	A1S	Potri.001G071700	Potri.001G071700(AS)	POPTR_0001s12600	sp|Q9ZUM9|ASHR2_ARATH	Histone-lysine N-methyltransferase ASHR2 OS=Arabidopsis thaliana GN=ASHR2 PE=2 SV=3	AT2G19640.2	| Symbols: ASHR2 | ASH1-related protein 2 | chr2:8491401-8492597 FORWARD LENGTH=398	LOC_Os08g10470.2	protein|histone-lysine N-methyltransferase ASHR2, putative, expressed	IMGA|Medtr5g027020.1	Histone-lysine N-methyltransferase ASHR2 chr5 10945980-10947687 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_01295	A	A1S	Potri.001G071500	Potri.001G071500(AS)	POPTR_0001s12610	NA	NA	AT5G47900.1	| Symbols: | Protein of unknown function (DUF1624) | chr5:19392408-19394963 FORWARD LENGTH=440	LOC_Os02g32504.1	protein|heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed	IMGA|contig_71955_1.1	Heparan-alpha-glucosaminide N-acetyltransferase contig_71955 1516-147 H PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005739|mitochondrion
pt2_01296	B	B2S	Potri.001G071400	Potri.001G071400(BS) Potri.001G071200(DS)	POPTR_0001s12620	sp|Q9SD53|Y3720_ARATH	UPF0481 protein At3g47200 OS=Arabidopsis thaliana GN=At3g47200 PE=1 SV=1	AT3G50120.1	| Symbols: | Plant protein of unknown function (DUF247) | chr3:18585157-18587246 REVERSE LENGTH=531	LOC_Os12g29650.1	protein|plant protein of unknown function domain containing protein, expressed	IMGA|Medtr5g086340.1	hypothetical protein chr5 36305986-36307922 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005886|plasma membrane
pt2_01297	A	A1S	Potri.001G071100	Potri.001G071100(AS)	POPTR_0001s12630	sp|Q43291|RL211_ARATH	60S ribosomal protein L21-1 OS=Arabidopsis thaliana GN=RPL21A PE=2 SV=2	AT1G09690.1	| Symbols: | Translation protein SH3-like family protein | chr1:3136407-3137430 REVERSE LENGTH=164	LOC_Os03g04750.1	protein|60S ribosomal protein L21-2, putative, expressed	NA	NA	GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005730|nucleolus GO:0005737|cytoplasm GO:0005840|ribosome GO:0009507|chloroplast GO:0022625|cytosolic large ribosomal subunit GO:0022626|cytosolic ribosome
pt2_01298	A	A2S	Potri.001G071000	Potri.001G071000(AS) Potri.003G159700(DS)	POPTR_0001s12640	sp|Q8LNZ5|XTHB_PHAAN	Probable xyloglucan endotransglucosylase/hydrolase protein B OS=Phaseolus angularis GN=XTHB PE=2 SV=1	AT5G13870.1	| Symbols: EXGT-A4, XTH5 | xyloglucan endotransglucosylase/hydrolase 5 | chr5:4475089-4476217 REVERSE LENGTH=293	LOC_Os11g33270.1	protein|glycosyl hydrolases family 16, putative, expressed	IMGA|Medtr5g091730.1	Xyloglucan endotransglucosylase/hydrolase chr5 38992618-38991125 E EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0006073|cellular glucan metabolic process	GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0016762|xyloglucan:xyloglucosyl transferase activity GO:0016798|hydrolase activity, acting on glycosyl bonds	GO:0005576|extracellular region GO:0005618|cell wall GO:0048046|apoplast
pt2_01299	A	A1S	Potri.001G070900	Potri.001G070900(AS)	POPTR_0001s12650	sp|Q2HXL0|RBOHC_SOLTU	Respiratory burst oxidase homolog protein C OS=Solanum tuberosum GN=RBOHC PE=1 SV=2	AT5G47910.1	| Symbols: RBOHD, ATRBOHD | respiratory burst oxidase homologue D | chr5:19397585-19401768 FORWARD LENGTH=921	LOC_Os11g33120.1	protein|respiratory burst oxidase, putative, expressed	IMGA|contig_76663_1.1	Respiratory burst oxidase protein F contig_76663 746-1988 E PREDN 20111014	GO:0006952|defense response GO:0007231|osmosensory signaling pathway GO:0009408|response to heat GO:0009611|response to wounding GO:0033500|carbohydrate homeostasis GO:0042744|hydrogen peroxide catabolic process GO:0043069|negative regulation of programmed cell death GO:0050832|defense response to fungus GO:0072593|reactive oxygen species metabolic process	GO:0004601|peroxidase activity GO:0005506|iron ion binding GO:0005509|calcium ion binding GO:0009055|electron carrier activity GO:0016174|NAD(P)H oxidase activity GO:0016491|oxidoreductase activity GO:0050660|flavin adenine dinucleotide binding GO:0050664|oxidoreductase activity, acting on NADH or NADPH, oxygen as acceptor	GO:0005634|nucleus GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_01300	A	A1S	Potri.001G070800	Potri.001G070800(AS)	POPTR_0001s12660	sp|Q55909|Y305_SYNY3	TVP38/TMEM64 family membrane protein slr0305 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr0305 PE=3 SV=1	AT1G44960.1	| Symbols: | SNARE associated Golgi protein family | chr1:16999576-17001447 FORWARD LENGTH=261	LOC_Os11g33100.1	protein|SNARE associated Golgi protein, putative, expressed	NA	NA	GO:0008150|biological_process	NA	GO:0005886|plasma membrane
pt2_01301	A	A2S	Potri.001G070700	Potri.001G070700(AS) Potri.003G160000(DS)	POPTR_0001s12680	NA	NA	AT1G28190.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G12340.1); Has 166 Blast hits to 162 proteins in 36 species: Archae - 0; Bacteria - 2; Metazoa - 15; Fungi - 5; Plants - 124; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). | chr1:9847015-9847815 REVERSE LENGTH=266	LOC_Os11g33050.1	protein|expressed protein	IMGA|Medtr5g089820.1	hypothetical protein chr5 38026220-38025455 F EGN_Mt100125 20111014	GO:0006612|protein targeting to membrane GO:0008150|biological_process GO:0009723|response to ethylene stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010363|regulation of plant-type hypersensitive response GO:0035556|intracellular signal transduction	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_01302	A	A1S	Potri.001G070600	Potri.001G070600(AS)	POPTR_0001s12690	sp|Q39817|CALX_SOYBN	Calnexin homolog OS=Glycine max PE=2 SV=1	AT5G61790.1	| Symbols: CNX1, ATCNX1 | calnexin 1 | chr5:24827394-24829642 REVERSE LENGTH=530	LOC_Os04g32950.1	protein|calreticulin precursor protein, putative, expressed	NA	NA	GO:0006457|protein folding GO:0009408|response to heat GO:0009627|systemic acquired resistance GO:0009644|response to high light intensity GO:0034976|response to endoplasmic reticulum stress GO:0042542|response to hydrogen peroxide	GO:0005509|calcium ion binding GO:0051082|unfolded protein binding	GO:0005739|mitochondrion GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005783|endoplasmic reticulum GO:0005886|plasma membrane GO:0009505|plant-type cell wall GO:0009506|plasmodesma GO:0009507|chloroplast GO:0016020|membrane GO:0043231|intracellular membrane-bounded organelle
pt2_01303	A	A1S	Potri.001G070500	Potri.001G070500(AS)	POPTR_0001s12700	sp|P55861|MCM2_XENLA	DNA replication licensing factor mcm2 OS=Xenopus laevis GN=mcm2 PE=1 SV=2	AT1G44900.1	| Symbols: MCM2, ATMCM2 | minichromosome maintenance (MCM2/3/5) family protein | chr1:16970291-16974457 FORWARD LENGTH=936	LOC_Os11g29380.1	protein|MCM2 - Putative minichromosome maintenance MCM complex subunit 2, expressed	NA	NA	GO:0006084|acetyl-CoA metabolic process GO:0006260|DNA replication GO:0006261|DNA-dependent DNA replication GO:0006268|DNA unwinding involved in replication GO:0006270|DNA replication initiation GO:0006275|regulation of DNA replication GO:0006306|DNA methylation GO:0008283|cell proliferation GO:0009165|nucleotide biosynthetic process GO:0009790|embryo development GO:0009909|regulation of flower development GO:0010082|regulation of root meristem growth GO:0034968|histone lysine methylation GO:0042127|regulation of cell proliferation GO:0048364|root development GO:0051567|histone H3-K9 methylation GO:0051726|regulation of cell cycle	GO:0003677|DNA binding GO:0005524|ATP binding GO:0008094|DNA-dependent ATPase activity	GO:0000790|nuclear chromatin GO:0005634|nucleus GO:0005829|cytosol
pt2_01304	A	A1S	Potri.001G070400	Potri.001G070400(AS)	POPTR_0001s12710	NA	NA	AT3G16510.1	| Symbols: | Calcium-dependent lipid-binding (CaLB domain) family protein | chr3:5617112-5618194 REVERSE LENGTH=360	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_01305	A	A1S	Potri.001G070300	Potri.001G070300(AS)	POPTR_0001s12730	sp|Q9FTZ2|EBP_ORYSJ	Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Oryza sativa subsp. japonica GN=Os01g0103600 PE=2 SV=1	AT1G20050.1	| Symbols: HYD1 | C-8,7 sterol isomerase | chr1:6949160-6950135 FORWARD LENGTH=223	LOC_Os01g01369.1	protein|3-beta-hydroxysteroid-Delta-isomerase, putative, expressed	NA	NA	GO:0006084|acetyl-CoA metabolic process GO:0016125|sterol metabolic process GO:0016126|sterol biosynthetic process GO:0016132|brassinosteroid biosynthetic process GO:0019932|second-messenger-mediated signaling GO:0060964|regulation of gene silencing by miRNA	GO:0000247|C-8 sterol isomerase activity GO:0047750|cholestenol delta-isomerase activity	GO:0005886|plasma membrane
pt2_01306	A	A1S	Potri.001G070200	Potri.001G070200(AS)	POPTR_0001s12740	NA	NA	NA	NA	LOC_Os11g34680.1	protein|RNA recognition motif containing protein, putative, expressed	NA	NA	NA	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding	NA
pt2_01307	A	A2S	Potri.T133500	Potri.T133500(AS) Potri.001G070100(BS)	POPTR_0001s12750	sp|Q0WQK2|ZDHC9_ARATH	Probable S-acyltransferase At3g26935 OS=Arabidopsis thaliana GN=At3g26935 PE=1 SV=1	AT3G26935.1	| Symbols: | DHHC-type zinc finger family protein | chr3:9933001-9935218 REVERSE LENGTH=443	LOC_Os08g42620.2	protein|zinc finger DHHC domain-containing protein, putative, expressed	IMGA|Medtr1g098390.1	Palmitoyltransferase SWF1 chr1 28233746-28237541 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0008270|zinc ion binding	GO:0005886|plasma membrane
pt2_01308	A	A2S	Potri.T133600	Potri.T133600(AS) Potri.001G070000(BS)	POPTR_0001s12760	NA	NA	AT1G60360.1	| Symbols: | RING/U-box superfamily protein | chr1:22242748-22243731 REVERSE LENGTH=327	LOC_Os05g40980.2	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr5g041310.1	RING finger protein chr5 17741815-17742509 E EGN_Mt100125 20111014	NA	GO:0008270|zinc ion binding	GO:0005737|cytoplasm
pt2_01309	A	A2S	Potri.001G069900	Potri.001G069900(AS) Potri.T133700(AS)	POPTR_0001s12770	sp|Q9ZWA6|MGP_ARATH	Zinc finger protein MAGPIE OS=Arabidopsis thaliana GN=MGP PE=1 SV=1	AT3G50700.1	| Symbols: AtIDD2, IDD2 | indeterminate(ID)-domain 2 | chr3:18840945-18842829 FORWARD LENGTH=452	LOC_Os02g31890.1	protein|ZOS2-08 - C2H2 zinc finger protein, expressed	IMGA|Medtr1g083100.1	Zinc finger protein-like protein chr1 21501009-21504901 E EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0006355|regulation of transcription, DNA-dependent GO:0006612|protein targeting to membrane GO:0009617|response to bacterium GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009965|leaf morphogenesis GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0030154|cell differentiation GO:0031348|negative regulation of defense response GO:0035304|regulation of protein dephosphorylation GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003676|nucleic acid binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_01310	A	A2S	Potri.T133800	Potri.T133800(AS) Potri.001G069800(BS)	POPTR_0001s12780	sp|Q9M7K4|POT5_ARATH	Potassium transporter 5 OS=Arabidopsis thaliana GN=POT5 PE=1 SV=1	AT4G13420.1	| Symbols: HAK5, ATHAK5 | high affinity K+ transporter 5 | chr4:7797038-7802174 REVERSE LENGTH=785	LOC_Os01g70490.1	protein|potassium transporter, putative, expressed	IMGA|Medtr5g071860.1	Potassium transporter chr5 29568951-29563893 E EGN_Mt100125 20111014	GO:0006813|potassium ion transport GO:0071805|potassium ion transmembrane transport	GO:0009674|potassium:sodium symporter activity GO:0015079|potassium ion transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_01311	A	A1S	Potri.001G069600	Potri.001G069600(AS)	POPTR_0001s12790	sp|Q9M7K4|POT5_ARATH	Potassium transporter 5 OS=Arabidopsis thaliana GN=POT5 PE=1 SV=1	AT4G13420.1	| Symbols: HAK5, ATHAK5 | high affinity K+ transporter 5 | chr4:7797038-7802174 REVERSE LENGTH=785	LOC_Os01g70490.1	protein|potassium transporter, putative, expressed	IMGA|Medtr5g070670.1	Potassium transporter chr5 28933662-28942483 E EGN_Mt100125 20111014	GO:0006813|potassium ion transport GO:0071805|potassium ion transmembrane transport	GO:0009674|potassium:sodium symporter activity GO:0015079|potassium ion transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_01312	A	A1S	Potri.001G069500	Potri.001G069500(AS)	POPTR_0001s12800	sp|Q9SFX2|PUB43_ARATH	U-box domain-containing protein 43 OS=Arabidopsis thaliana GN=PUB43 PE=2 SV=1	AT1G76390.2	| Symbols: | ARM repeat superfamily protein | chr1:28655914-28658531 FORWARD LENGTH=811	LOC_Os12g17900.1	protein|armadillo/beta-catenin repeat family protein, putative, expressed	IMGA|contig_56658_1.1	U-box domain-containing protein contig_56658 130-4641 F PREDN 20111014	GO:0016567|protein ubiquitination	GO:0004842|ubiquitin-protein ligase activity	GO:0000151|ubiquitin ligase complex GO:0005737|cytoplasm GO:0005886|plasma membrane
pt2_01313	A	A1S	Potri.001G069400	Potri.001G069400(AS)	POPTR_0001s12810	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01314	A	A1S	Potri.001G069300	Potri.001G069300(AS)	POPTR_0001s12820	sp|Q9FZ90|ERF87_ARATH	Ethylene-responsive transcription factor ERF087 OS=Arabidopsis thaliana GN=ERF087 PE=2 SV=1	AT1G28160.1	| Symbols: | Integrase-type DNA-binding superfamily protein | chr1:9839387-9840124 FORWARD LENGTH=245	LOC_Os04g32790.1	protein|AP2 domain containing protein, expressed	IMGA|Medtr5g032820.1	AP2/ERF domain-containing transcription factor chr5 13732308-13733396 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009739|response to gibberellin stimulus GO:0010030|positive regulation of seed germination	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_01315	A	A1S	Potri.001G069200	Potri.001G069200(AS)	POPTR_0001s12830	sp|Q93ZY7|NUD12_ARATH	Nudix hydrolase 12, mitochondrial OS=Arabidopsis thaliana GN=NUDT12 PE=2 SV=1	AT1G12880.1	| Symbols: atnudt12, NUDT12 | nudix hydrolase homolog 12 | chr1:4390036-4391046 FORWARD LENGTH=203	LOC_Os11g32750.2	protein|hydrolase, NUDIX family, domain containing protein, expressed	IMGA|Medtr5g078020.1	Nudix hydrolase chr5 32317324-32319991 F EGN_Mt100125 20111014	NA	GO:0016787|hydrolase activity	GO:0005739|mitochondrion
pt2_01316	A	A3S	Potri.001G069100	Potri.001G069100(AS) Potri.006G192900(BS) Potri.003G161200(DS)	POPTR_0001s12840	sp|Q9M2F1|RS272_ARATH	40S ribosomal protein S27-2 OS=Arabidopsis thaliana GN=RPS27B PE=2 SV=2	AT3G61110.1	| Symbols: ARS27A, RS27A | ribosomal protein S27 | chr3:22611710-22612632 FORWARD LENGTH=86	LOC_Os04g27860.1	protein|40S ribosomal protein S27, putative, expressed	NA	NA	GO:0001510|RNA methylation GO:0006412|translation GO:0009664|plant-type cell wall organization GO:0042545|cell wall modification	GO:0003735|structural constituent of ribosome	GO:0005618|cell wall GO:0005622|intracellular GO:0005737|cytoplasm GO:0005840|ribosome GO:0009506|plasmodesma GO:0022626|cytosolic ribosome GO:0022627|cytosolic small ribosomal subunit
pt2_01317	A	A2S	Potri.001G069000	Potri.001G069000(AS) Potri.003G161300(DS)	POPTR_0001s12850	sp|Q9FZ87|GH317_ARATH	Indole-3-acetic acid-amido synthetase GH3.17 OS=Arabidopsis thaliana GN=GH3.17 PE=1 SV=1	AT1G28130.1	| Symbols: GH3.17 | Auxin-responsive GH3 family protein | chr1:9825431-9827883 FORWARD LENGTH=609	LOC_Os07g47490.1	protein|OsGH3.11 - Probable indole-3-acetic acid-amido synthetase, expressed	IMGA|Medtr5g016320.1	Indole-3-acetic acid-amido synthetase GH3.3 chr5 5576809-5574506 F EGN_Mt100125 20111014	GO:0009733|response to auxin stimulus GO:0010252|auxin homeostasis GO:0016132|brassinosteroid biosynthetic process	GO:0010279|indole-3-acetic acid amido synthetase activity	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_01318	A	A1S	Potri.001G068900	Potri.001G068900(AS)	POPTR_0001s12860	NA	NA	AT5G13390.1	| Symbols: NEF1 | no exine formation 1 | chr5:4292809-4296572 FORWARD LENGTH=1123	LOC_Os11g32470.1	protein|NEF1, putative, expressed	NA	NA	NA	NA	GO:0009507|chloroplast
pt2_01319	A	A1S	Potri.001G068800	Potri.001G068800(AS)	POPTR_0001s12870	sp|Q67YC9|Y4141_ARATH	Uncharacterized protein At4g14100 OS=Arabidopsis thaliana GN=At4g14100 PE=2 SV=1	AT3G23760.1	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: transferases, transferring glycosyl groups (TAIR:AT4G14100.1); Has 108 Blast hits to 104 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). | chr3:8562965-8564640 REVERSE LENGTH=194	LOC_Os03g63380.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0016757|transferase activity, transferring glycosyl groups	GO:0005773|vacuole GO:0009507|chloroplast
pt2_01320	A	A1S	Potri.001G068700	Potri.001G068700(AS)	POPTR_0001s12880	sp|Q8LE94|RING3_ARATH	E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana GN=At3g02290 PE=2 SV=1	AT5G38895.1	| Symbols: | RING/U-box superfamily protein | chr5:15572084-15573315 FORWARD LENGTH=221	LOC_Os01g70160.1	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr5g046970.1	E3 ubiquitin-protein ligase chr5 20175519-20174021 I EGN_Mt100125 20111014	GO:0000303|response to superoxide GO:0006499|N-terminal protein myristoylation GO:0006914|autophagy GO:0009651|response to salt stress GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009743|response to carbohydrate stimulus GO:0009873|ethylene mediated signaling pathway GO:0010200|response to chitin GO:0010286|heat acclimation	GO:0008270|zinc ion binding	GO:0005737|cytoplasm
pt2_01321	A	A1S	Potri.001G068600	Potri.001G068600(AS)	POPTR_0001s12890	sp|Q9LYR6|PTR49_ARATH	Probable peptide/nitrate transporter At5g13400 OS=Arabidopsis thaliana GN=At5g13400 PE=2 SV=1	AT5G13400.1	| Symbols: | Major facilitator superfamily protein | chr5:4296854-4299079 REVERSE LENGTH=624	LOC_Os01g01360.1	protein|peptide transporter PTR2, putative, expressed	IMGA|Medtr5g055000.1	Peptide transporter PTR chr5 22113111-22119217 F EGN_Mt100125 20111014	GO:0006857|oligopeptide transport	GO:0005215|transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_01322	A	A1S	Potri.001G068500	Potri.001G068500(AS)	POPTR_0001s12900	NA	NA	AT5G64680.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:25854433-25855331 FORWARD LENGTH=203	LOC_Os01g15520.1	protein|expressed protein	NA	NA	GO:0000398|mRNA splicing, via spliceosome GO:0000741|karyogamy GO:0001510|RNA methylation GO:0006312|mitotic recombination GO:0006626|protein targeting to mitochondrion GO:0008150|biological_process GO:0009560|embryo sac egg cell differentiation GO:0009640|photomorphogenesis GO:0010388|cullin deneddylation GO:0051604|protein maturation	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005730|nucleolus
pt2_01323	A	A1S	Potri.001G068400	Potri.001G068400(AS)	POPTR_0001s12910	sp|Q9SAA9|CP511_ARATH	Sterol 14-demethylase OS=Arabidopsis thaliana GN=CYP51G1 PE=1 SV=1	AT1G11680.1	| Symbols: CYP51G1, EMB1738, CYP51A2, CYP51 | CYTOCHROME P450 51G1 | chr1:3938925-3940585 FORWARD LENGTH=488	LOC_Os11g32240.1	protein|cytochrome P450 51, putative, expressed	IMGA|contig_176089_1.1	Cytochrome P450-like protein contig_176089 389-1549 F PREDN 20111014	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0009086|methionine biosynthetic process GO:0009793|embryo development ending in seed dormancy GO:0016126|sterol biosynthetic process GO:0019745|pentacyclic triterpenoid biosynthetic process GO:0055114|oxidation-reduction process	GO:0004497|monooxygenase activity GO:0005506|iron ion binding GO:0008398|sterol 14-demethylase activity GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005576|extracellular region GO:0005783|endoplasmic reticulum GO:0005794|Golgi apparatus GO:0005886|plasma membrane
pt2_01324	A	A1S	Potri.001G068300	Potri.001G068300(AS)	POPTR_0001s12920	sp|Q9LYR5|FKB19_ARATH	Peptidyl-prolyl cis-trans isomerase FKBP19, chloroplastic OS=Arabidopsis thaliana GN=FKBP19 PE=1 SV=1	AT5G13410.1	| Symbols: | FKBP-like peptidyl-prolyl cis-trans isomerase family protein | chr5:4299830-4301706 REVERSE LENGTH=256	LOC_Os07g04160.1	protein|peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed	NA	NA	GO:0000413|protein peptidyl-prolyl isomerization GO:0006457|protein folding GO:0018208|peptidyl-proline modification	GO:0003755|peptidyl-prolyl cis-trans isomerase activity GO:0005528|FK506 binding	GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009543|chloroplast thylakoid lumen GO:0009579|thylakoid GO:0031977|thylakoid lumen
pt2_01325	A	A1S	Potri.001G068300	Potri.001G068300(AS)	POPTR_0001s12920	sp|Q9LYR5|FKB19_ARATH	Peptidyl-prolyl cis-trans isomerase FKBP19, chloroplastic OS=Arabidopsis thaliana GN=FKBP19 PE=1 SV=1	AT5G13410.1	| Symbols: | FKBP-like peptidyl-prolyl cis-trans isomerase family protein | chr5:4299830-4301706 REVERSE LENGTH=256	LOC_Os07g04160.1	protein|peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed	NA	NA	GO:0000413|protein peptidyl-prolyl isomerization GO:0006457|protein folding GO:0018208|peptidyl-proline modification	GO:0003755|peptidyl-prolyl cis-trans isomerase activity GO:0005528|FK506 binding	GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009543|chloroplast thylakoid lumen GO:0009579|thylakoid GO:0031977|thylakoid lumen
pt2_01326	A	A1S	Potri.001G068300	Potri.001G068300(AS)	POPTR_0001s12920	sp|Q9LYR5|FKB19_ARATH	Peptidyl-prolyl cis-trans isomerase FKBP19, chloroplastic OS=Arabidopsis thaliana GN=FKBP19 PE=1 SV=1	AT5G13410.1	| Symbols: | FKBP-like peptidyl-prolyl cis-trans isomerase family protein | chr5:4299830-4301706 REVERSE LENGTH=256	LOC_Os07g04160.1	protein|peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed	NA	NA	GO:0000413|protein peptidyl-prolyl isomerization GO:0006457|protein folding GO:0018208|peptidyl-proline modification	GO:0003755|peptidyl-prolyl cis-trans isomerase activity GO:0005528|FK506 binding	GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009543|chloroplast thylakoid lumen GO:0009579|thylakoid GO:0031977|thylakoid lumen
pt2_01327	A	A1S	Potri.001G068200	Potri.001G068200(AS)	POPTR_0001s12930	sp|A0LTY8|TAL_ACIC1	Transaldolase OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=tal PE=3 SV=1	AT5G13420.1	| Symbols: | Aldolase-type TIM barrel family protein | chr5:4302080-4304212 REVERSE LENGTH=438	LOC_Os01g70170.1	protein|transaldolase, putative, expressed	IMGA|Medtr5g024890.1	Transaldolase chr5 9806520-9806177 H EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0006096|glycolysis GO:0006098|pentose-phosphate shunt GO:0009060|aerobic respiration GO:0046686|response to cadmium ion	GO:0003824|catalytic activity GO:0004801|sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009536|plastid GO:0009570|chloroplast stroma
pt2_01328	A	A1S	Potri.001G068100	Potri.001G068100(AS)	POPTR_0001s12940	sp|Q9FZJ1|IRX10_ARATH	Probable beta-1,4-xylosyltransferase IRX10 OS=Arabidopsis thaliana GN=IRX10 PE=2 SV=1	AT1G27440.1	| Symbols: GUT2, IRX10, ATGUT1 | Exostosin family protein | chr1:9529265-9531213 REVERSE LENGTH=412	LOC_Os01g70200.1	protein|exostosin family domain containing protein, expressed	IMGA|Medtr5g031480.1	Exostosin-like protein chr5 13079105-13085686 F EGN_Mt100125 20111014	GO:0010413|glucuronoxylan metabolic process GO:0010417|glucuronoxylan biosynthetic process GO:0045492|xylan biosynthetic process	GO:0003824|catalytic activity GO:0080116|glucuronoxylan glucuronosyltransferase activity	GO:0005794|Golgi apparatus GO:0016020|membrane
pt2_01329	A	A1S	Potri.001G068000	Potri.001G068000(AS)	POPTR_0001s12950	sp|Q55CU8|RSC5_DICDI	Random slug protein 5 OS=Dictyostelium discoideum GN=rsc5 PE=2 SV=1	AT1G01630.1	| Symbols: | Sec14p-like phosphatidylinositol transfer family protein | chr1:229206-230675 FORWARD LENGTH=255	LOC_Os03g63370.1	protein|CRAL/TRIO domain containing protein, expressed	IMGA|Medtr5g062310.1	Clavesin chr5 25079243-25077091 F EGN_Mt100125 20111014	GO:0006810|transport GO:0019344|cysteine biosynthetic process	GO:0005215|transporter activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01330	A	A2S	Potri.001G068000	Potri.001G068000(AS) Potri.003G162100(DS)	POPTR_0001s12950	sp|Q55CU8|RSC5_DICDI	Random slug protein 5 OS=Dictyostelium discoideum GN=rsc5 PE=2 SV=1	AT1G01630.1	| Symbols: | Sec14p-like phosphatidylinositol transfer family protein | chr1:229206-230675 FORWARD LENGTH=255	LOC_Os03g63370.1	protein|CRAL/TRIO domain containing protein, expressed	IMGA|Medtr5g062310.1	Clavesin chr5 25079243-25077091 F EGN_Mt100125 20111014	GO:0006810|transport GO:0019344|cysteine biosynthetic process	GO:0005215|transporter activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01331	A	A1S	Potri.001G068000	Potri.001G068000(AS)	POPTR_0001s12950	sp|Q55CU8|RSC5_DICDI	Random slug protein 5 OS=Dictyostelium discoideum GN=rsc5 PE=2 SV=1	AT1G01630.1	| Symbols: | Sec14p-like phosphatidylinositol transfer family protein | chr1:229206-230675 FORWARD LENGTH=255	LOC_Os03g63370.1	protein|CRAL/TRIO domain containing protein, expressed	IMGA|Medtr5g062310.1	Clavesin chr5 25079243-25077091 F EGN_Mt100125 20111014	GO:0006810|transport GO:0019344|cysteine biosynthetic process	GO:0005215|transporter activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01332	A	A2S	Potri.001G067900	Potri.001G067900(AS) Potri.003G162200(DS)	POPTR_0001s12960	sp|P51132|UCRI2_TOBAC	Cytochrome b-c1 complex subunit Rieske-2, mitochondrial OS=Nicotiana tabacum PE=2 SV=1	AT5G13430.1	| Symbols: | Ubiquinol-cytochrome C reductase iron-sulfur subunit | chr5:4305414-4307399 REVERSE LENGTH=272	LOC_Os02g32120.1	protein|cytochrome b-c1 complex subunit Rieske, mitochondrial precursor, putative, expressed	NA	NA	GO:0055114|oxidation-reduction process	GO:0008121|ubiquinol-cytochrome-c reductase activity GO:0016491|oxidoreductase activity GO:0016679|oxidoreductase activity, acting on diphenols and related substances as donors GO:0046872|metal ion binding GO:0051537|2 iron, 2 sulfur cluster binding	GO:0005739|mitochondrion GO:0005750|mitochondrial respiratory chain complex III GO:0016020|membrane
pt2_01333	A	A1S	Potri.001G067800	Potri.001G067800(AS)	POPTR_0001s12970	sp|O23627|SYGM1_ARATH	Glycine--tRNA ligase 1, mitochondrial OS=Arabidopsis thaliana GN=GLYRS-1 PE=2 SV=1	AT1G29880.1	| Symbols: | glycyl-tRNA synthetase / glycine--tRNA ligase | chr1:10459662-10462781 REVERSE LENGTH=729	LOC_Os08g42560.1	protein|tRNA synthetase class II core domain containing protein, expressed	IMGA|contig_63847_1.1	Glycyl-tRNA synthetase contig_63847 4432-2385 E PREDN 20111014	GO:0006094|gluconeogenesis GO:0006418|tRNA aminoacylation for protein translation GO:0006426|glycyl-tRNA aminoacylation GO:0007010|cytoskeleton organization GO:0010498|proteasomal protein catabolic process GO:0046686|response to cadmium ion	GO:0000166|nucleotide binding GO:0004812|aminoacyl-tRNA ligase activity GO:0004820|glycine-tRNA ligase activity GO:0005524|ATP binding	GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0005829|cytosol
pt2_01334	A	A1S	Potri.001G067700	Potri.001G067700(AS)	POPTR_0001s12980	sp|Q8VYZ0|ORTH2_ARATH	E3 ubiquitin-protein ligase ORTHRUS 2 OS=Arabidopsis thaliana GN=ORTH2 PE=1 SV=1	AT1G57820.1	| Symbols: VIM1, ORTH2 | Zinc finger (C3HC4-type RING finger) family protein | chr1:21414342-21417902 REVERSE LENGTH=645	LOC_Os05g01230.1	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr5g098680.1	E3 ubiquitin-protein ligase UHRF1 chr5 42156395-42149836 E EGN_Mt100125 20111014	GO:0000280|nuclear division GO:0000724|double-strand break repair via homologous recombination GO:0006260|DNA replication GO:0006261|DNA-dependent DNA replication GO:0006270|DNA replication initiation GO:0006275|regulation of DNA replication GO:0006306|DNA methylation GO:0006325|chromatin organization GO:0006342|chromatin silencing GO:0006355|regulation of transcription, DNA-dependent GO:0007000|nucleolus organization GO:0008283|cell proliferation GO:0009555|pollen development GO:0010424|DNA methylation on cytosine within a CG sequence GO:0016444|somatic cell DNA recombination GO:0016567|protein ubiquitination GO:0016568|chromatin modification GO:0016572|histone phosphorylation GO:0031047|gene silencing by RNA GO:0031508|centromeric heterochromatin assembly GO:0032776|DNA methylation on cytosine GO:0051567|histone H3-K9 methylation GO:0051726|regulation of cell cycle GO:0090309|positive regulation of methylation-dependent chromatin silencing	GO:0003677|DNA binding GO:0003682|chromatin binding GO:0004842|ubiquitin-protein ligase activity GO:0008270|zinc ion binding GO:0008327|methyl-CpG binding GO:0010385|double-stranded methylated DNA binding GO:0010428|methyl-CpNpG binding GO:0010429|methyl-CpNpN binding GO:0042393|histone binding	GO:0005634|nucleus GO:0010369|chromocenter
pt2_01335	A	A1S	Potri.001G067600	Potri.001G067600(AS)	POPTR_0001s12990	sp|Q9LYU3|EF113_ARATH	Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana GN=ERF113 PE=2 SV=1	AT5G13330.1	| Symbols: Rap2.6L | related to AP2 6l | chr5:4272384-4274461 FORWARD LENGTH=212	LOC_Os04g32620.1	protein|ethylene-responsive transcription factor ERF114, putative, expressed	IMGA|Medtr1g087920.1	Ethylene responsive transcription factor 2b chr1 23755953-23757256 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009407|toxin catabolic process GO:0009414|response to water deprivation GO:0009651|response to salt stress GO:0009723|response to ethylene stimulus GO:0009737|response to abscisic acid stimulus GO:0009751|response to salicylic acid stimulus GO:0009753|response to jasmonic acid stimulus GO:0010260|organ senescence GO:0010583|response to cyclopentenone GO:0045893|positive regulation of transcription, DNA-dependent GO:0046482|para-aminobenzoic acid metabolic process GO:0071497|cellular response to freezing	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_01336	C	C1A	Potri.001G067500	Potri.001G067500(CA)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01337	B	B1S	Potri.001G067500	Potri.001G067500(BS)	POPTR_0001s13010	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01338	A	A1S	Potri.001G067400	Potri.001G067400(AS)	POPTR_0001s13020	sp|Q8LG98|OTUBL_ARATH	Ubiquitin thioesterase otubain-like OS=Arabidopsis thaliana GN=At1g28120 PE=2 SV=2	AT1G28120.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Ovarian tumour, otubain (InterPro:IPR003323), Ubiquitin thioesterase Otubain (InterPro:IPR016615), Peptidase C65, otubain (InterPro:IPR019400); Has 413 Blast hits to 411 proteins in 139 species: Archae - 0; Bacteria - 0; Metazoa - 184; Fungi - 83; Plants - 88; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). | chr1:9813219-9815143 REVERSE LENGTH=306	LOC_Os08g42540.1	protein|ubiquitin thioesterase otubain-like, putative, expressed	NA	NA	GO:0008150|biological_process GO:0019538|protein metabolic process	GO:0003674|molecular_function GO:0008242|omega peptidase activity	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_01339	A	A1S	Potri.001G067300	Potri.001G067300(AS)	POPTR_0001s13030	sp|Q64M78|OML4_ORYSJ	Protein MEI2-like 4 OS=Oryza sativa subsp. japonica GN=ML4 PE=2 SV=1	AT5G61960.2	| Symbols: AML1, ML1 | MEI2-like protein 1 | chr5:24879001-24883483 REVERSE LENGTH=915	LOC_Os02g31290.2	protein|AML1, putative, expressed	IMGA|Medtr5g068540.1	Protein terminal ear1 chr5 28030406-28026385 H EGN_Mt100125 20111014	GO:0045836|positive regulation of meiosis GO:0045927|positive regulation of growth GO:0048507|meristem development	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding GO:0005515|protein binding	GO:0005634|nucleus
pt2_01340	A	A1S	Potri.001G067200	Potri.001G067200(AS)	POPTR_0001s13040	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01341	A	A2S	Potri.001G067000	Potri.001G067000(AS) Potri.001G067100(AS)	POPTR_0001s13050	sp|Q9Y5Z4|HEBP2_HUMAN	Heme-binding protein 2 OS=Homo sapiens GN=HEBP2 PE=1 SV=1	AT1G17100.1	| Symbols: | SOUL heme-binding family protein | chr1:5844766-5845539 FORWARD LENGTH=232	LOC_Os01g11230.1	protein|SOUL heme-binding protein, putative, expressed	NA	NA	GO:0008150|biological_process GO:0019761|glucosinolate biosynthetic process	NA	GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0009507|chloroplast
pt2_01342	A	A1S	Potri.001G066900	Potri.001G066900(AS)	POPTR_0001s13060	NA	NA	AT2G33550.1	| Symbols: | Homeodomain-like superfamily protein | chr2:14210180-14211487 REVERSE LENGTH=314	LOC_Os04g32590.1	protein|transcription factor, putative, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_01343	A	A1S	Potri.001G066800	Potri.001G066800(AS)	POPTR_0001s13070	sp|Q5W7F2|AGD3_ARATH	ADP-ribosylation factor GTPase-activating protein AGD3 OS=Arabidopsis thaliana GN=AGD3 PE=1 SV=1	AT5G13300.1	| Symbols: SFC, VAN3, AGD3 | ARF GTPase-activating protein | chr5:4255923-4262018 REVERSE LENGTH=827	LOC_Os09g33600.1	protein|ARF GTPase-activating domain-containing protein, putative, expressed	IMGA|Medtr5g022050.1	Ankyrin repeat domain-containing protein chr5 8396885-8392674 E EGN_Mt100125 20111014	GO:0003002|regionalization GO:0006897|endocytosis GO:0007155|cell adhesion GO:0009733|response to auxin stimulus GO:0009855|determination of bilateral symmetry GO:0009887|organ morphogenesis GO:0009888|tissue development GO:0009944|polarity specification of adaxial/abaxial axis GO:0009965|leaf morphogenesis GO:0010014|meristem initiation GO:0010051|xylem and phloem pattern formation GO:0010087|phloem or xylem histogenesis GO:0010089|xylem development GO:0010090|trichome morphogenesis GO:0010638|positive regulation of organelle organization GO:0016049|cell growth GO:0033043|regulation of organelle organization GO:0033044|regulation of chromosome organization GO:0045010|actin nucleation GO:0045595|regulation of cell differentiation GO:0048439|flower morphogenesis GO:0048449|floral organ formation GO:0048519|negative regulation of biological process GO:0048589|developmental growth GO:0048765|root hair cell differentiation GO:0071555|cell wall organization	GO:0005515|protein binding GO:0005543|phospholipid binding GO:0008060|ARF GTPase activator activity GO:0008270|zinc ion binding GO:0035091|phosphatidylinositol binding	GO:0005794|Golgi apparatus GO:0005829|cytosol GO:0005886|plasma membrane GO:0030140|trans-Golgi network transport vesicle
pt2_01344	A	A1S	Potri.001G066700	Potri.001G066700(AS)	POPTR_0001s13080	sp|Q9LYU7|CRN_ARATH	Inactive leucine-rich repeat receptor-like protein kinase CORYNE OS=Arabidopsis thaliana GN=CRN PE=1 SV=1	AT5G13290.2	| Symbols: SOL2, CRN | Protein kinase superfamily protein | chr5:4252924-4254215 REVERSE LENGTH=401	LOC_Os01g70260.1	protein|receptor-like protein kinase 2 precursor, putative, expressed	IMGA|Medtr5g026510.1	LRR receptor-like serine/threonine-protein kinase FEI chr5 10652878-10642878 E EGN_Mt100125 20111014	GO:0006406|mRNA export from nucleus GO:0006468|protein phosphorylation GO:0007155|cell adhesion GO:0009855|determination of bilateral symmetry GO:0009886|post-embryonic morphogenesis GO:0009909|regulation of flower development GO:0009944|polarity specification of adaxial/abaxial axis GO:0009965|leaf morphogenesis GO:0010014|meristem initiation GO:0010073|meristem maintenance GO:0010074|maintenance of meristem identity GO:0010075|regulation of meristem growth GO:0010082|regulation of root meristem growth GO:0010090|trichome morphogenesis GO:0016570|histone modification GO:0045010|actin nucleation GO:0048449|floral organ formation GO:0048481|ovule development GO:0048507|meristem development GO:0048765|root hair cell differentiation GO:0071555|cell wall organization	GO:0004672|protein kinase activity GO:0005515|protein binding GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0019900|kinase binding GO:0033612|receptor serine/threonine kinase binding	GO:0005886|plasma membrane
pt2_01345	A	A1S	Potri.001G066500	Potri.001G066500(AS)	POPTR_0001s13090	sp|Q40392|TMVRN_NICGU	TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1	AT5G36930.1	| Symbols: | Disease resistance protein (TIR-NBS-LRR class) family | chr5:14567771-14571907 REVERSE LENGTH=1188	LOC_Os01g15580.1	protein|disease resistance protein RGA2, putative, expressed	IMGA|contig_62367_1.1	TIR-NBS disease resistance-like protein contig_62367 389-4897 H PREDN 20111014	GO:0006952|defense response GO:0007165|signal transduction	GO:0043531|ADP binding	GO:0005622|intracellular GO:0005737|cytoplasm
pt2_01346	A	A1S	Potri.001G066400	Potri.001G066400(AS)	POPTR_0001s13100	sp|Q03200|LIRP1_ORYSJ	Light-regulated protein OS=Oryza sativa subsp. japonica GN=LIR1 PE=2 SV=1	AT3G26740.1	| Symbols: CCL | CCR-like | chr3:9827868-9828461 FORWARD LENGTH=141	LOC_Os01g01340.1	protein|light-induced protein 1-like, putative, expressed	NA	NA	GO:0008150|biological_process GO:0030003|cellular cation homeostasis GO:0070838|divalent metal ion transport	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_01347	A	A1S	Potri.001G066200	Potri.001G066200(AS)	POPTR_0001s13110	sp|Q94JM3|ARFB_ARATH	Auxin response factor 2 OS=Arabidopsis thaliana GN=ARF2 PE=1 SV=2	AT5G62000.4	| Symbols: ARF2 | auxin response factor 2 | chr5:24910859-24914873 FORWARD LENGTH=853	LOC_Os12g29520.4	protein|auxin response factor, putative, expressed	IMGA|Medtr5g076270.1	Auxin response factor chr5 31499972-31490689 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0008285|negative regulation of cell proliferation GO:0009725|response to hormone stimulus GO:0009737|response to abscisic acid stimulus GO:0009911|positive regulation of flower development GO:0010047|fruit dehiscence GO:0010150|leaf senescence GO:0010227|floral organ abscission GO:0042744|hydrogen peroxide catabolic process GO:0045892|negative regulation of transcription, DNA-dependent GO:0048481|ovule development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0043565|sequence-specific DNA binding GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_01348	A	A1S	Potri.001G066100	Potri.001G066100(AS)	POPTR_0001s13120	sp|Q9LYU9|PP378_ARATH	Pentatricopeptide repeat-containing protein At5g13270, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H90 PE=2 SV=1	AT5G13270.1	| Symbols: RARE1 | Pentatricopeptide repeat (PPR) superfamily protein | chr5:4246954-4249212 REVERSE LENGTH=752	LOC_Os02g01610.1	protein|pentatricopeptide, putative, expressed	IMGA|Medtr5g095690.1	Pentatricopeptide repeat-containing protein chr5 40792756-40789774 H EGN_Mt100125 20111014	GO:0009451|RNA modification GO:0016556|mRNA modification	NA	GO:0009507|chloroplast
pt2_01349	A	A1S	Potri.001G066000	Potri.001G066000(AS)	POPTR_0001s13130	NA	NA	AT1G28100.4	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 64 Blast hits to 64 proteins in 27 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 6; Plants - 42; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr1:9802120-9803981 FORWARD LENGTH=290	LOC_Os10g35644.1	protein|expressed protein	NA	NA	GO:0008150|biological_process GO:0015995|chlorophyll biosynthetic process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01350	A	A1S	Potri.001G065900	Potri.001G065900(AS)	POPTR_0001s13140	sp|Q93Y09|SCP45_ARATH	Serine carboxypeptidase-like 45 OS=Arabidopsis thaliana GN=SCPL45 PE=2 SV=1	AT1G28110.2	| Symbols: SCPL45 | serine carboxypeptidase-like 45 | chr1:9804153-9806832 REVERSE LENGTH=461	LOC_Os11g31980.1	protein|OsSCP63 - Putative Serine Carboxypeptidase homologue, expressed	IMGA|Medtr5g072570.1	Serine carboxypeptidase-like protein chr5 29906817-29903151 H EGN_Mt100125 20111014	GO:0006508|proteolysis	GO:0004185|serine-type carboxypeptidase activity	GO:0005576|extracellular region GO:0009505|plant-type cell wall GO:0009506|plasmodesma
pt2_01351	A	A1S	Potri.001G065800	Potri.001G065800(AS)	POPTR_0001s13160	NA	NA	AT3G48860.2	| Symbols: | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23700.1); Has 12429 Blast hits to 9751 proteins in 897 species: Archae - 180; Bacteria - 1190; Metazoa - 6552; Fungi - 1361; Plants - 886; Viruses - 50; Other Eukaryotes - 2210 (source: NCBI BLink). | chr3:18117619-18121853 FORWARD LENGTH=577	LOC_Os01g70320.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	NA	GO:0005737|cytoplasm
pt2_01352	A	A1S	Potri.001G065800	Potri.001G065800(AS)	POPTR_0001s13160	NA	NA	AT3G48860.2	| Symbols: | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23700.1); Has 12429 Blast hits to 9751 proteins in 897 species: Archae - 180; Bacteria - 1190; Metazoa - 6552; Fungi - 1361; Plants - 886; Viruses - 50; Other Eukaryotes - 2210 (source: NCBI BLink). | chr3:18117619-18121853 FORWARD LENGTH=577	LOC_Os01g70320.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	NA	GO:0005737|cytoplasm
pt2_01353	A	A1S	Potri.001G065800	Potri.001G065800(AS)	POPTR_0001s13160	NA	NA	AT3G48860.2	| Symbols: | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23700.1); Has 12429 Blast hits to 9751 proteins in 897 species: Archae - 180; Bacteria - 1190; Metazoa - 6552; Fungi - 1361; Plants - 886; Viruses - 50; Other Eukaryotes - 2210 (source: NCBI BLink). | chr3:18117619-18121853 FORWARD LENGTH=577	LOC_Os01g70320.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	NA	GO:0005737|cytoplasm
pt2_01354	A	A1S	Potri.001G065700	Potri.001G065700(AS)	POPTR_0001s13170	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01355	A	A1S	Potri.001G065600	Potri.001G065600(AS)	POPTR_0001s13180	sp|Q8LL04|CPL3_ARATH	RNA polymerase II C-terminal domain phosphatase-like 3 OS=Arabidopsis thaliana GN=CPL3 PE=1 SV=2	AT2G33540.1	| Symbols: CPL3, ATCPL3 | C-terminal domain phosphatase-like 3 | chr2:14204081-14208797 REVERSE LENGTH=1241	LOC_Os11g31890.1	protein|NLI interacting factor-like phosphatase, putative, expressed	NA	NA	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0006366|transcription from RNA polymerase II promoter GO:0009651|response to salt stress GO:0009788|negative regulation of abscisic acid mediated signaling pathway	GO:0004721|phosphoprotein phosphatase activity GO:0008022|protein C-terminus binding GO:0008420|CTD phosphatase activity	GO:0005622|intracellular GO:0005634|nucleus
pt2_01356	A	A1S	Potri.001G062900	Potri.001G062900(AS)	POPTR_0001s13190	sp|Q93W88|BH137_ARATH	Transcription factor bHLH137 OS=Arabidopsis thaliana GN=BHLH137 PE=2 SV=1	AT5G50915.2	| Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr5:20710764-20712252 REVERSE LENGTH=286	LOC_Os09g33580.1	protein|BEE 1, putative, expressed	IMGA|contig_61564_1.1	BHLH transcription factor contig_61564 6268-1844 E PREDN 20111014	GO:0009739|response to gibberellin stimulus	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_01357	A	A1S	Potri.001G062800	Potri.001G062800(AS)	POPTR_0001s13200	NA	NA	AT3G48800.1	| Symbols: | Sterile alpha motif (SAM) domain-containing protein | chr3:18095825-18096661 REVERSE LENGTH=278	LOC_Os03g63320.1	protein|SAM domain containing protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_01358	A	A1S	Potri.001G062700	Potri.001G062700(AS)	POPTR_0001s13210	sp|Q9M9Y4|DRIP1_ARATH	E3 ubiquitin protein ligase DRIP1 OS=Arabidopsis thaliana GN=DRIP1 PE=1 SV=2	AT5G13250.1	| Symbols: | RING finger protein | chr5:4234486-4241615 FORWARD LENGTH=387	LOC_Os04g32510.1	protein|expressed protein	IMGA|Medtr1g093150.1	hypothetical protein chr1 26155119-26152749 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_01359	C	C1S	Potri.001G062700	Potri.001G062700(CS)	sp|Q9M9Y4|DRIP1_ARATH	E3 ubiquitin protein ligase DRIP1 OS=Arabidopsis thaliana GN=DRIP1 PE=1 SV=2	AT5G13250.1	| Symbols: | RING finger protein | chr5:4234486-4241615 FORWARD LENGTH=387	LOC_Os04g32510.1	protein|expressed protein	IMGA|Medtr1g093150.1	hypothetical protein chr1 26155119-26152749 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_01360	C	C1S	Potri.001G062600	Potri.001G062600(CS)	sp|Q9LYV3|PP377_ARATH	Putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3 SV=1	AT5G13230.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:4222514-4224982 FORWARD LENGTH=822	LOC_Os03g32620.1	protein|pentatricopeptide, putative, expressed	IMGA|Medtr5g095690.1	Pentatricopeptide repeat-containing protein chr5 40792756-40789774 H EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005739|mitochondrion
pt2_01361	A	A1S	Potri.001G062500	Potri.001G062500(AS)	POPTR_0001s13240	sp|Q93ZM9|TIF9_ARATH	Protein TIFY 9 OS=Arabidopsis thaliana GN=TIFY9 PE=1 SV=1	AT5G13220.1	| Symbols: JAZ10, TIFY9, JAS1 | jasmonate-zim-domain protein 10 | chr5:4219001-4220502 FORWARD LENGTH=197	LOC_Os04g32480.1	protein|zinc-finger protein, putative, expressed	NA	NA	GO:0007165|signal transduction GO:0009414|response to water deprivation GO:0009611|response to wounding GO:0009620|response to fungus GO:0009695|jasmonic acid biosynthetic process GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009753|response to jasmonic acid stimulus GO:0009867|jasmonic acid mediated signaling pathway GO:0010112|regulation of systemic acquired resistance GO:0042538|hyperosmotic salinity response GO:2000022|regulation of jasmonic acid mediated signaling pathway	GO:0005515|protein binding GO:0042803|protein homodimerization activity	GO:0005634|nucleus
pt2_01362	B	B2S	Potri.003G004300	Potri.003G004300(BS) Potri.001G165500(BS)	POPTR_0001s13245	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01363	A	A2S	Potri.001G062400	Potri.001G062400(AS) Potri.001G165500(BA)	POPTR_0001s13250	sp|Q5ZA07|C3H41_ORYSJ	E3 ubiquitin-protein ligase makorin OS=Oryza sativa subsp. japonica GN=MKRN PE=2 SV=1	NA	NA	LOC_Os06g21390.4	protein|Zinc finger C-x8-C-x5-C-x3-H type domain containing protein, expressed	NA	NA	NA	GO:0003676|nucleic acid binding GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_01364	B	B4S	Potri.003G004400	Potri.003G004400(BS) Potri.008G203700(BS) Potri.T166900(BS) Potri.007G048500(BS)	POPTR_0001s13260	NA	NA	AT5G28780.1	| Symbols: | PIF1 helicase | chr5:10812907-10814173 REVERSE LENGTH=337	LOC_Os07g45750.1	protein|retrotransposon protein, putative, unclassified, expressed	IMGA|Medtr5g027410.1	ATP-dependent DNA helicase PIF1 chr5 11142764-11148044 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01365	D	D1S	Potri.001G062200	Potri.001G062200(DS)	POPTR_0001s13270	NA	NA	AT5G43400.1	| Symbols: | Uncharacterised conserved protein UCP015417, vWA | chr5:17426182-17428149 REVERSE LENGTH=655	LOC_Os09g32360.1	protein|gp176, putative, expressed	IMGA|Medtr5g045130.1	hypothetical protein chr5 19368847-19372643 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_01366	A	A2S	Potri.001G062100	Potri.001G062100(AS) Potri.003G165300(DS)	POPTR_0001s13280	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_01367	A	A1S	Potri.001G062100	Potri.001G062100(AS)	POPTR_0001s13280	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_01368	A	A2S	Potri.001G062000	Potri.001G062000(AS) Potri.003G165800(DS)	POPTR_0001s13290	NA	NA	AT2G33510.1	| Symbols: | CONTAINS InterPro DOMAIN/s: WW/Rsp5/WWP (InterPro:IPR001202); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28070.1); Has 3898 Blast hits to 1138 proteins in 179 species: Archae - 0; Bacteria - 40; Metazoa - 2353; Fungi - 242; Plants - 298; Viruses - 92; Other Eukaryotes - 873 (source: NCBI BLink). | chr2:14194195-14195473 FORWARD LENGTH=189	LOC_Os02g31140.1	protein|major ampullate spidroin 2-2, putative, expressed	NA	NA	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01369	A	A2S	Potri.001G061900	Potri.001G061900(AS) Potri.003G165900(DS)	POPTR_0001s13300	NA	NA	AT5G13190.1	| Symbols: | CONTAINS InterPro DOMAIN/s: LPS-induced tumor necrosis factor alpha factor (InterPro:IPR006629); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:4204987-4206205 REVERSE LENGTH=134	LOC_Os02g31100.1	protein|LITAF-domain-containing protein, putative, expressed	NA	NA	GO:0006612|protein targeting to membrane GO:0009646|response to absence of light GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010363|regulation of plant-type hypersensitive response GO:0030968|endoplasmic reticulum unfolded protein response GO:0034051|negative regulation of plant-type hypersensitive response	GO:0005515|protein binding	GO:0005886|plasma membrane
pt2_01370	A	A1S	Potri.001G061800	Potri.001G061800(AS)	POPTR_0001s13310	sp|Q9C7E8|COL15_ARATH	Zinc finger protein CONSTANS-LIKE 15 OS=Arabidopsis thaliana GN=COL15 PE=2 SV=1	AT1G28050.1	| Symbols: | B-box type zinc finger protein with CCT domain | chr1:9775768-9777657 REVERSE LENGTH=433	LOC_Os08g42440.1	protein|CCT/B-box zinc finger protein, putative, expressed	IMGA|Medtr5g069480.1	Zinc finger protein CONSTANS-like protein chr5 28470900-28474190 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0007623|circadian rhythm	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_01371	A	A1S	Potri.001G061700	Potri.001G061700(AS)	POPTR_0001s13320	sp|Q94AG2|SERK1_ARATH	Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2	AT1G71830.1	| Symbols: SERK1, ATSERK1 | somatic embryogenesis receptor-like kinase 1 | chr1:27018575-27021842 FORWARD LENGTH=625	LOC_Os11g31530.1	protein|BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	IMGA|Medtr5g087840.1	Somatic embryogenesis receptor kinase chr5 37094332-37091040 F EGN_Mt100125 20111014	GO:0000226|microtubule cytoskeleton organization GO:0006468|protein phosphorylation GO:0007030|Golgi organization GO:0007062|sister chromatid cohesion GO:0009556|microsporogenesis GO:0009742|brassinosteroid mediated signaling pathway GO:0009793|embryo development ending in seed dormancy GO:0009880|embryonic pattern specification GO:0010072|primary shoot apical meristem specification GO:0010152|pollen maturation GO:0010227|floral organ abscission GO:0010228|vegetative to reproductive phase transition of meristem GO:0010431|seed maturation GO:0016310|phosphorylation GO:0042742|defense response to bacterium GO:0045595|regulation of cell differentiation GO:0046777|protein autophosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004675|transmembrane receptor protein serine/threonine kinase activity GO:0005515|protein binding GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0033612|receptor serine/threonine kinase binding GO:0042802|identical protein binding	GO:0005886|plasma membrane GO:0043234|protein complex
pt2_01372	A	A1S	Potri.001G061600	Potri.001G061600(AS)	POPTR_0001s13330	sp|Q94AG2|SERK1_ARATH	Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2	AT5G21090.1	| Symbols: | Leucine-rich repeat (LRR) family protein | chr5:7164758-7166904 FORWARD LENGTH=218	LOC_Os01g59440.1	protein|BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	IMGA|Medtr5g087840.1	Somatic embryogenesis receptor kinase chr5 37094332-37091040 F EGN_Mt100125 20111014	GO:0006096|glycolysis GO:0006833|water transport GO:0006972|hyperosmotic response GO:0007030|Golgi organization GO:0007165|signal transduction GO:0009266|response to temperature stimulus GO:0009627|systemic acquired resistance GO:0009651|response to salt stress GO:0034976|response to endoplasmic reticulum stress GO:0042744|hydrogen peroxide catabolic process GO:0046686|response to cadmium ion	NA	GO:0005886|plasma membrane
pt2_01373	A	A1S	Potri.001G061500	Potri.001G061500(AS)	POPTR_0001s13340	sp|O22799|Y2349_ARATH	Uncharacterized protein At2g33490 OS=Arabidopsis thaliana GN=At2g33490 PE=1 SV=2	AT2G33490.1	| Symbols: | hydroxyproline-rich glycoprotein family protein | chr2:14183552-14187666 FORWARD LENGTH=623	LOC_Os09g33510.2	protein|hydroxyproline-rich glycoprotein family protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_01374	A	A2S	Potri.001G061400	Potri.001G061400(AS) Potri.003G166400(DS)	POPTR_0001s13350	sp|Q38799|ODPB_ARATH	Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Arabidopsis thaliana GN=PDH2 PE=1 SV=2	AT5G50850.1	| Symbols: MAB1 | Transketolase family protein | chr5:20689671-20692976 FORWARD LENGTH=363	LOC_Os08g42410.1	protein|transketolase, putative, expressed	NA	NA	GO:0006096|glycolysis GO:0008152|metabolic process GO:0009060|aerobic respiration GO:0009744|response to sucrose stimulus GO:0009749|response to glucose stimulus GO:0009750|response to fructose stimulus GO:0019722|calcium-mediated signaling GO:0042742|defense response to bacterium GO:0046686|response to cadmium ion	GO:0003824|catalytic activity GO:0004739|pyruvate dehydrogenase (acetyl-transferring) activity	GO:0005730|nucleolus GO:0005739|mitochondrion GO:0005774|vacuolar membrane GO:0048046|apoplast
pt2_01375	A	A1S	Potri.001G061300	Potri.001G061300(AS)	POPTR_0001s13360	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01376	G	G1	NA	NA	POPTR_0001s13370	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01377	A	A1S	Potri.001G061200	Potri.001G061200(AS)	POPTR_0001s13380	sp|O49255|NAC29_ARATH	NAC domain-containing protein 29 OS=Arabidopsis thaliana GN=NAC029 PE=2 SV=1	AT5G13180.1	| Symbols: ANAC083, VNI2, NAC083 | NAC domain containing protein 83 | chr5:4196643-4197577 FORWARD LENGTH=252	LOC_Os07g37920.1	protein|no apical meristem protein, putative, expressed	IMGA|Medtr5g041940.1	NAC domain protein chr5 18013715-18012368 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006612|protein targeting to membrane GO:0007275|multicellular organismal development GO:0009651|response to salt stress GO:0009737|response to abscisic acid stimulus GO:0009741|response to brassinosteroid stimulus GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010089|xylem development GO:0010150|leaf senescence GO:0010363|regulation of plant-type hypersensitive response GO:0045892|negative regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_01378	A	A1S	Potri.001G061100	Potri.001G061100(AS)	POPTR_0001s13390	sp|Q9C104|GDE1_SCHPO	Glycerophosphodiester phosphodiesterase gde1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gde1 PE=1 SV=1	AT3G02040.1	| Symbols: SRG3 | senescence-related gene 3 | chr3:348505-349909 REVERSE LENGTH=361	LOC_Os02g31030.1	protein|glycerophosphoryl diester phosphodiesterase family protein, putative, expressed	NA	NA	GO:0006071|glycerol metabolic process GO:0006629|lipid metabolic process GO:0030643|cellular phosphate ion homeostasis GO:0046686|response to cadmium ion	GO:0008081|phosphoric diester hydrolase activity GO:0008889|glycerophosphodiester phosphodiesterase activity	GO:0005737|cytoplasm GO:0009536|plastid
pt2_01379	A	A1S	Potri.001G061000	Potri.001G061000(AS)	POPTR_0001s13400	sp|O35459|ECH1_MOUSE	Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Mus musculus GN=Ech1 PE=2 SV=1	AT5G43280.1	| Symbols: ATDCI1, DCI1 | delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 | chr5:17367947-17369113 FORWARD LENGTH=278	LOC_Os01g70090.1	protein|enoyl-CoA hydratase/isomerase family protein, putative, expressed	NA	NA	GO:0006635|fatty acid beta-oxidation GO:0008152|metabolic process GO:0009062|fatty acid catabolic process GO:0009845|seed germination	GO:0003824|catalytic activity GO:0004300|enoyl-CoA hydratase activity GO:0051750|delta3,5-delta2,4-dienoyl-CoA isomerase activity	GO:0005739|mitochondrion GO:0005777|peroxisome
pt2_01380	A	A1S	Potri.001G060900	Potri.001G060900(AS)	POPTR_0001s13410	sp|Q9FY94|SWT15_ARATH	Bidirectional sugar transporter SWEET15 OS=Arabidopsis thaliana GN=SWEET15 PE=2 SV=1	AT5G13170.1	| Symbols: SAG29, SWEET15, AtSWEET15 | senescence-associated gene 29 | chr5:4181331-4183171 REVERSE LENGTH=292	LOC_Os11g31190.1	protein|nodulin MtN3 family protein, putative, expressed	IMGA|Medtr5g067530.1	Protein RUPTURED POLLEN GRAIN chr5 27562869-27565164 E EGN_Mt100125 20111014	GO:0010150|leaf senescence GO:0015770|sucrose transport GO:0071215|cellular response to abscisic acid stimulus GO:0071446|cellular response to salicylic acid stimulus GO:0071470|cellular response to osmotic stress	GO:0008515|sucrose transmembrane transporter activity GO:0051119|sugar transmembrane transporter activity	GO:0005886|plasma membrane GO:0005887|integral to plasma membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_01381	A	A1S	Potri.001G060800	Potri.001G060800(AS)	POPTR_0001s13420	sp|Q9FE20|PBS1_ARATH	Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1	AT5G13160.1	| Symbols: PBS1 | Protein kinase superfamily protein | chr5:4176854-4179682 FORWARD LENGTH=456	LOC_Os02g30900.1	protein|protein kinase domain containing protein, expressed	IMGA|Medtr5g092120.1	Serine/threonine protein kinase chr5 39187993-39185584 F EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0006952|defense response GO:0009816|defense response to bacterium, incompatible interaction GO:0042742|defense response to bacterium GO:0046777|protein autophosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005515|protein binding GO:0016301|kinase activity	GO:0005886|plasma membrane
pt2_01382	A	A1S	Potri.001G060700	Potri.001G060700(AS)	POPTR_0001s13430	sp|O54922|EXOC7_RAT	Exocyst complex component 7 OS=Rattus norvegicus GN=Exoc7 PE=2 SV=1	AT5G13150.1	| Symbols: ATEXO70C1, EXO70C1 | exocyst subunit exo70 family protein C1 | chr5:4172969-4174930 REVERSE LENGTH=653	LOC_Os11g06700.1	protein|exo70 exocyst complex subunit, putative, expressed	IMGA|Medtr5g073450.1	Exocyst complex component chr5 30274154-30276420 E EGN_Mt100125 20111014	GO:0006887|exocytosis GO:0006904|vesicle docking involved in exocytosis GO:0009827|plant-type cell wall modification GO:0009860|pollen tube growth	NA	GO:0000145|exocyst GO:0005634|nucleus GO:0090406|pollen tube
pt2_01383	A	A2S	Potri.001G060600	Potri.001G060600(AS) Potri.003G167000(DS)	POPTR_0001s13440	sp|Q7G8Y5|GRXC1_ORYSJ	Glutaredoxin-C1 OS=Oryza sativa subsp. japonica GN=GRXC1 PE=3 SV=1	AT5G14070.1	| Symbols: ROXY2 | Thioredoxin superfamily protein | chr5:4541915-4542337 FORWARD LENGTH=140	ChrUn.fgenesh.mRNA.94	protein|expressed protein	IMGA|Medtr5g077550.1	Glutaredoxin-C9 chr5 32105415-32105044 H EGN_Mt100125 20111014	GO:0045454|cell redox homeostasis GO:0045892|negative regulation of transcription, DNA-dependent GO:0048653|anther development	GO:0005515|protein binding GO:0009055|electron carrier activity GO:0015035|protein disulfide oxidoreductase activity	GO:0005575|cellular_component
pt2_01384	A	A2S	Potri.001G060500	Potri.001G060500(AS) Potri.003G167100(DS)	POPTR_0001s13450	NA	NA	AT5G13140.1	| Symbols: | Pollen Ole e 1 allergen and extensin family protein | chr5:4170688-4171744 REVERSE LENGTH=267	LOC_Os09g32988.1	protein|POEI18 - Pollen Ole e I allergen and extensin family protein precursor, expressed	NA	NA	GO:0000271|polysaccharide biosynthetic process GO:0007389|pattern specification process GO:0008150|biological_process GO:0008361|regulation of cell size GO:0009825|multidimensional cell growth GO:0009926|auxin polar transport GO:0009932|cell tip growth GO:0010015|root morphogenesis GO:0010817|regulation of hormone levels GO:0019344|cysteine biosynthetic process GO:0040007|growth GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0048767|root hair elongation GO:0071555|cell wall organization	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_01385	A	A1S	Potri.001G060400	Potri.001G060400(AS)	POPTR_0001s13460	NA	NA	AT5G50760.1	| Symbols: | SAUR-like auxin-responsive protein family | chr5:20644780-20645331 FORWARD LENGTH=183	LOC_Os01g70050.1	protein|OsSAUR3 - Auxin-responsive SAUR gene family member, expressed	NA	NA	GO:0009733|response to auxin stimulus GO:0010167|response to nitrate GO:0015706|nitrate transport	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_01386	A	A1S	Potri.001G060300	Potri.001G060300(AS)	POPTR_0001s13470	sp|A5UMN6|MTAD_METS3	5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=mtaD PE=3 SV=1	NA	NA	LOC_Os12g28270.1	protein|amidohydrolase, putative, expressed	NA	NA	NA	NA	NA
pt2_01387	A	A1S	Potri.001G060200	Potri.001G060200(AS)	POPTR_0001s13480	sp|Q9ASS6|CP20B_ARATH	Peptidyl-prolyl cis-trans isomerase CYP20-2, chloroplastic OS=Arabidopsis thaliana GN=CYP20-2 PE=1 SV=1	AT5G13120.2	| Symbols: CYP20-2 | cyclophilin 20-2 | chr5:4162714-4164720 REVERSE LENGTH=255	LOC_Os05g01270.1	protein|peptidyl-prolyl cis-trans isomerase, putative, expressed	IMGA|AC225458_18.1	Peptidyl-prolyl cis-trans isomerase AC225458.11 44405-42269 E EGN_Mt100125 20111014	GO:0006457|protein folding GO:0010275|NAD(P)H dehydrogenase complex assembly GO:0019344|cysteine biosynthetic process	GO:0003755|peptidyl-prolyl cis-trans isomerase activity GO:0005515|protein binding GO:0043424|protein histidine kinase binding	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009533|chloroplast stromal thylakoid GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009543|chloroplast thylakoid lumen GO:0009579|thylakoid GO:0031977|thylakoid lumen
pt2_01388	A	A1S	Potri.001G060100	Potri.001G060100(AS)	POPTR_0001s13490	NA	NA	AT1G69040.1	| Symbols: ACR4 | ACT domain repeat 4 | chr1:25958196-25960079 FORWARD LENGTH=451	LOC_Os08g42080.1	protein|ACR5, putative, expressed	IMGA|Medtr5g047260.1	ACR4 chr5 20288839-20285558 F EGN_Mt100125 20111014	GO:0006521|regulation of cellular amino acid metabolic process GO:0008152|metabolic process GO:0009735|response to cytokinin stimulus	GO:0016597|amino acid binding	GO:0005829|cytosol GO:0009507|chloroplast
pt2_01389	A	A1S	Potri.001G060000	Potri.001G060000(AS)	POPTR_0001s13500	sp|Q9LSD5|TCP20_ARATH	Transcription factor TCP20 OS=Arabidopsis thaliana GN=TCP20 PE=1 SV=1	AT3G27010.1	| Symbols: AT-TCP20, PCF1, TCP20, ATTCP20 | TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20 | chr3:9957810-9958754 REVERSE LENGTH=314	LOC_Os01g69980.1	protein|TCP family transcription factor, putative, expressed	IMGA|Medtr5g039600.1	TCP family transcription factor-like protein chr5 17003724-17002078 E EGN_Mt100125 20111014	GO:0008361|regulation of cell size GO:0009653|anatomical structure morphogenesis GO:1900056|negative regulation of leaf senescence	GO:0000987|core promoter proximal region sequence-specific DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_01390	A	A2S	Potri.001G059900	Potri.001G059900(AS) Potri.003G168000(DS)	POPTR_0001s13510	sp|Q43793|G6PDC_TOBAC	Glucose-6-phosphate 1-dehydrogenase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1	AT5G13110.1	| Symbols: G6PD2 | glucose-6-phosphate dehydrogenase 2 | chr5:4158952-4161640 FORWARD LENGTH=596	LOC_Os07g22350.1	protein|glucose-6-phosphate 1-dehydrogenase, chloroplast precursor, putative, expressed	NA	NA	GO:0006006|glucose metabolic process GO:0009051|pentose-phosphate shunt, oxidative branch GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0004345|glucose-6-phosphate dehydrogenase activity GO:0050661|NADP binding	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_01391	A	A2S	Potri.001G059800	Potri.001G059800(AS) Potri.003G168200(DS)	POPTR_0001s13520	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_01392	A	A1S	Potri.001G059700	Potri.001G059700(AS)	POPTR_0001s13530	NA	NA	AT5G13100.1	| Symbols: | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:4156789-4158235 FORWARD LENGTH=354	LOC_Os01g01295.1	protein|expressed protein	NA	NA	NA	NA	GO:0009507|chloroplast
pt2_01393	A	A3S	Potri.001G251800	Potri.001G251800(AS) Potri.001G059600(AS) Potri.018G056200(BA)	POPTR_0001s13540	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01394	A	A3S	Potri.001G251800	Potri.001G251800(AS) Potri.001G059600(AS) Potri.T009200(AS)	POPTR_0001s13540	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01395	A	A1S	Potri.001G059500	Potri.001G059500(AS)	POPTR_0001s13550	NA	NA	AT1G27990.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52420.1); Has 86 Blast hits to 86 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr1:9752799-9753919 REVERSE LENGTH=271	LOC_Os04g31710.1	protein|expressed protein	IMGA|Medtr1g100470.1	hypothetical protein chr1 29294666-29293622 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_01396	A	A2S	Potri.001G059500	Potri.001G059500(AS) Potri.003G168400(DS)	POPTR_0001s13550	NA	NA	AT1G27990.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52420.1); Has 86 Blast hits to 86 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr1:9752799-9753919 REVERSE LENGTH=271	LOC_Os04g31710.1	protein|expressed protein	IMGA|Medtr1g100470.1	hypothetical protein chr1 29294666-29293622 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_01397	A	A1S	Potri.001G059500	Potri.001G059500(AS)	POPTR_0001s13550	NA	NA	AT1G27990.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52420.1); Has 86 Blast hits to 86 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr1:9752799-9753919 REVERSE LENGTH=271	LOC_Os04g31710.1	protein|expressed protein	IMGA|Medtr1g100470.1	hypothetical protein chr1 29294666-29293622 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_01398	A	A2S	Potri.001G059400	Potri.001G059400(AS) Potri.001G059300(AA)	POPTR_0001s13560	NA	NA	AT5G13090.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:4153758-4154567 REVERSE LENGTH=269	LOC_Os02g30420.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_01399	A	A1S	Potri.001G059100	Potri.001G059100(AS)	POPTR_0001s13570	NA	NA	AT5G14090.1	| Symbols: | unknown protein; Has 56 Blast hits to 56 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 46; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). | chr5:4547230-4549214 FORWARD LENGTH=358	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01400	A	A1S	Potri.001G059000	Potri.001G059000(AS)	POPTR_0001s13580	sp|Q9C509|SGPL_ARATH	Sphingosine-1-phosphate lyase OS=Arabidopsis thaliana GN=At1g27980 PE=2 SV=1	AT1G27980.1	| Symbols: DPL1, ATDPL1 | dihydrosphingosine phosphate lyase | chr1:9748812-9752618 FORWARD LENGTH=544	LOC_Os01g01080.3	protein|decarboxylase, putative, expressed	NA	NA	GO:0006520|cellular amino acid metabolic process GO:0006635|fatty acid beta-oxidation GO:0006888|ER to Golgi vesicle-mediated transport GO:0009407|toxin catabolic process GO:0019752|carboxylic acid metabolic process GO:0030149|sphingolipid catabolic process GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	GO:0003824|catalytic activity GO:0016831|carboxy-lyase activity GO:0030170|pyridoxal phosphate binding	GO:0005783|endoplasmic reticulum GO:0016020|membrane
pt2_01401	A	A1S	Potri.001G058900	Potri.001G058900(AS)	POPTR_0001s13590	sp|Q9FF46|AB28G_ARATH	ABC transporter G family member 28 OS=Arabidopsis thaliana GN=ABCG28 PE=3 SV=1	AT5G60740.1	| Symbols: | ABC transporter family protein | chr5:24425824-24430269 REVERSE LENGTH=1109	LOC_Os11g22350.1	protein|white-brown complex homolog protein, putative, expressed	IMGA|Medtr1g094660.1	ABC transporter G family member chr1 26848968-26856489 E EGN_Mt100125 20111014	NA	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	NA
pt2_01402	C	C1S	Potri.001G058800	Potri.001G058800(CS)	sp|Q9FYA2|WRK75_ARATH	Probable WRKY transcription factor 75 OS=Arabidopsis thaliana GN=WRKY75 PE=2 SV=1	AT5G13080.1	| Symbols: WRKY75, ATWRKY75 | WRKY DNA-binding protein 75 | chr5:4149928-4151019 REVERSE LENGTH=145	LOC_Os11g29870.1	protein|WRKY72, expressed	IMGA|Medtr1g086790.1	WRKY transcription factor chr1 23203731-23201879 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009723|response to ethylene stimulus GO:0016036|cellular response to phosphate starvation GO:0019375|galactolipid biosynthetic process GO:0032107|regulation of response to nutrient levels GO:0042631|cellular response to water deprivation GO:0043620|regulation of DNA-dependent transcription in response to stress GO:0048527|lateral root development	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_01403	C	C1S	Potri.001G058800	Potri.001G058800(CS)	sp|Q9FYA2|WRK75_ARATH	Probable WRKY transcription factor 75 OS=Arabidopsis thaliana GN=WRKY75 PE=2 SV=1	AT5G13080.1	| Symbols: WRKY75, ATWRKY75 | WRKY DNA-binding protein 75 | chr5:4149928-4151019 REVERSE LENGTH=145	LOC_Os11g29870.1	protein|WRKY72, expressed	IMGA|Medtr1g086790.1	WRKY transcription factor chr1 23203731-23201879 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009723|response to ethylene stimulus GO:0016036|cellular response to phosphate starvation GO:0019375|galactolipid biosynthetic process GO:0032107|regulation of response to nutrient levels GO:0042631|cellular response to water deprivation GO:0043620|regulation of DNA-dependent transcription in response to stress GO:0048527|lateral root development	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_01404	A	A1S	Potri.001G058700	Potri.001G058700(AS)	POPTR_0001s13620	NA	NA	AT1G24267.1	| Symbols: | Protein of unknown function (DUF1664) | chr1:8604451-8607241 REVERSE LENGTH=343	LOC_Os01g01070.3	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_01405	A	A1S	Potri.001G058600	Potri.001G058600(AS)	POPTR_0001s13630	sp|Q6YZE8|SPL16_ORYSJ	Squamosa promoter-binding-like protein 16 OS=Oryza sativa subsp. japonica GN=SPL16 PE=2 SV=1	AT5G50570.2	| Symbols: SPL13A, SPL13 | Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein | chr5:20582555-20583791 REVERSE LENGTH=359	LOC_Os08g41940.1	protein|OsSPL16 - SBP-box gene family member, expressed	IMGA|Medtr5g046670.1	Squamosa promoter binding protein chr5 20048386-20043614 E EGN_Mt100125 20111014	GO:0048653|anther development	GO:0003677|DNA binding	GO:0005634|nucleus
pt2_01406	A	A1S	Potri.001G058500	Potri.001G058500(AS)	POPTR_0001s13640	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01407	A	A1S	Potri.001G058400	Potri.001G058400(AS)	POPTR_0001s13650	sp|Q03489|AGL9_PETHY	Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida GN=FBP2 PE=1 SV=2	AT1G24260.1	| Symbols: SEP3, AGL9 | K-box region and MADS-box transcription factor family protein | chr1:8593790-8595862 REVERSE LENGTH=250	LOC_Os09g32948.1	protein|OsMADS8 - MADS-box family gene with MIKCc type-box, expressed	IMGA|Medtr5g046790.1	MADS-box protein BM5A chr5 20099500-20092621 E EGN_Mt100125 20111014	GO:0001708|cell fate specification GO:0006355|regulation of transcription, DNA-dependent GO:0009908|flower development GO:0010093|specification of floral organ identity GO:0048440|carpel development GO:0048481|ovule development GO:0048507|meristem development GO:0048833|specification of floral organ number	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_01408	C	C1S	Potri.001G058200	Potri.001G058200(CS)	sp|Q0D4T4|MAD18_ORYSJ	MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica GN=MADS18 PE=1 SV=1	AT2G03710.3	| Symbols: SEP4, AGL3 | K-box region and MADS-box transcription factor family protein | chr2:1129622-1131242 FORWARD LENGTH=187	LOC_Os07g41370.1	protein|OsMADS18 - MADS-box family gene with MIKCc type-box, expressed	IMGA|Medtr5g046790.1	MADS-box protein BM5A chr5 20099500-20092621 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0010048|vernalization response GO:0010076|maintenance of floral meristem identity GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0048440|carpel development GO:0048441|petal development GO:0048442|sepal development GO:0048443|stamen development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_01409	A	A1S	Potri.001G058100	Potri.001G058100(AS)	POPTR_0001s13670	NA	NA	AT1G27290.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 44 Blast hits to 44 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:9481788-9482576 FORWARD LENGTH=142	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_01410	A	A1S	Potri.001G058100	Potri.001G058100(AS)	POPTR_0001s13670	NA	NA	AT1G27290.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 44 Blast hits to 44 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:9481788-9482576 FORWARD LENGTH=142	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_01411	A	A1S	Potri.001G058000	Potri.001G058000(AS)	POPTR_0001s13680	NA	NA	AT3G48660.1	| Symbols: | Protein of unknown function (DUF 3339) | chr3:18029659-18030133 FORWARD LENGTH=89	LOC_Os01g69890.1	protein|expressed protein	IMGA|contig_84074_1.1	Unknown protein contig_84074 595-1844 E PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_01412	A	A2S	Potri.001G057900	Potri.001G057900(AS) Potri.003G170500(DS)	POPTR_0001s13690	NA	NA	AT5G08391.1	| Symbols: | Protein of unknown function (DUF 3339) | chr5:2699357-2699566 FORWARD LENGTH=69	LOC_Os11g30360.1	protein|expressed protein	IMGA|contig_84074_1.1	Unknown protein contig_84074 595-1844 E PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_01413	A	A1S	Potri.001G057800	Potri.001G057800(AS)	POPTR_0001s13700	sp|Q9FYG2|CMTA4_ARATH	Calmodulin-binding transcription activator 4 OS=Arabidopsis thaliana GN=CMTA4 PE=1 SV=1	AT1G67310.1	| Symbols: | Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains | chr1:25198182-25203126 REVERSE LENGTH=1016	LOC_Os04g31900.1	protein|calmodulin-binding transcription activator 4, putative, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0005516|calmodulin binding	GO:0005634|nucleus GO:0005829|cytosol
pt2_01414	A	A1S	Potri.001G057700	Potri.001G057700(AS)	POPTR_0001s13710	NA	NA	AT1G27300.1	| Symbols: | unknown protein; Has 54 Blast hits to 54 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 6; Plants - 34; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). | chr1:9483324-9484194 FORWARD LENGTH=200	LOC_Os02g30610.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0005515|protein binding	GO:0005575|cellular_component GO:0005634|nucleus GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_01415	A	A1S	Potri.001G057600	Potri.001G057600(AS)	POPTR_0001s13720	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01416	A	A1S	Potri.001G057500	Potri.001G057500(AS)	POPTR_0001s13730	sp|Q9C7F5|NTF2_ARATH	Nuclear transport factor 2 OS=Arabidopsis thaliana GN=NTF2 PE=2 SV=1	AT1G27970.1	| Symbols: NTF2B | nuclear transport factor 2B | chr1:9746921-9747787 FORWARD LENGTH=126	LOC_Os08g42000.1	protein|nuclear transport factor, putative, expressed	NA	NA	GO:0006605|protein targeting GO:0006606|protein import into nucleus GO:0006612|protein targeting to membrane GO:0006810|transport GO:0006820|anion transport GO:0006862|nucleotide transport GO:0006869|lipid transport GO:0006888|ER to Golgi vesicle-mediated transport GO:0006891|intra-Golgi vesicle-mediated transport GO:0006913|nucleocytoplasmic transport GO:0006944|cellular membrane fusion GO:0010351|lithium ion transport GO:0010363|regulation of plant-type hypersensitive response GO:0015696|ammonium transport GO:0015802|basic amino acid transport GO:0016192|vesicle-mediated transport GO:0016558|protein import into peroxisome matrix GO:0043069|negative regulation of programmed cell death GO:0043090|amino acid import GO:0043269|regulation of ion transport	GO:0008536|Ran GTPase binding GO:0008565|protein transporter activity	GO:0005622|intracellular GO:0005634|nucleus GO:0005635|nuclear envelope GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane
pt2_01417	A	A1S	Potri.001G057400	Potri.001G057400(AS)	POPTR_0001s13740	sp|Q9C5U1|AHK3_ARATH	Histidine kinase 3 OS=Arabidopsis thaliana GN=AHK3 PE=1 SV=1	AT1G27320.1	| Symbols: AHK3, HK3 | histidine kinase 3 | chr1:9487780-9492027 FORWARD LENGTH=1036	LOC_Os01g69920.1	protein|histidine kinase, putative, expressed	IMGA|Medtr5g097410.1	Histidine kinase cytokinin receptor chr5 41625969-41632413 E EGN_Mt100125 20111014	GO:0000160|two-component signal transduction system (phosphorelay) GO:0000303|response to superoxide GO:0006355|regulation of transcription, DNA-dependent GO:0006635|fatty acid beta-oxidation GO:0006970|response to osmotic stress GO:0007165|signal transduction GO:0007623|circadian rhythm GO:0008219|cell death GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009651|response to salt stress GO:0009736|cytokinin mediated signaling pathway GO:0009755|hormone-mediated signaling pathway GO:0009863|salicylic acid mediated signaling pathway GO:0009873|ethylene mediated signaling pathway GO:0009909|regulation of flower development GO:0010029|regulation of seed germination GO:0010087|phloem or xylem histogenesis GO:0010150|leaf senescence GO:0010271|regulation of chlorophyll catabolic process GO:0016036|cellular response to phosphate starvation GO:0016310|phosphorylation GO:0016558|protein import into peroxisome matrix GO:0018106|peptidyl-histidine phosphorylation GO:0031537|regulation of anthocyanin metabolic process GO:0034757|negative regulation of iron ion transport GO:0042742|defense response to bacterium GO:0048509|regulation of meristem development GO:0048831|regulation of shoot development GO:0070417|cellular response to cold GO:0071215|cellular response to abscisic acid stimulus GO:0071329|cellular response to sucrose stimulus	GO:0000155|two-component sensor activity GO:0000156|two-component response regulator activity GO:0004673|protein histidine kinase activity GO:0004871|signal transducer activity GO:0005034|osmosensor activity GO:0005515|protein binding GO:0005524|ATP binding GO:0009884|cytokinin receptor activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0043424|protein histidine kinase binding	GO:0005886|plasma membrane
pt2_01418	A	A4S	Potri.001G057300	Potri.001G057300(AS) Potri.003G171200(DS) Potri.001G057200(DS) Potri.003G171100(DS)	POPTR_0001s13750	NA	NA	AT1G27330.1	| Symbols: | Ribosome associated membrane protein RAMP4 | chr1:9493064-9493898 FORWARD LENGTH=68	LOC_Os12g32950.1	protein|membrane protein, putative, expressed	NA	NA	GO:0006979|response to oxidative stress GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_01419	A	A1S	Potri.001G057200	Potri.001G057200(AS)	POPTR_0001s13760	sp|Q9QYI4|DJB12_MOUSE	DnaJ homolog subfamily B member 12 OS=Mus musculus GN=Dnajb12 PE=2 SV=2	AT5G53150.1	| Symbols: | DNAJ heat shock N-terminal domain-containing protein | chr5:21554935-21557202 FORWARD LENGTH=726	LOC_Os04g31940.1	protein|dnaJ domain containing protein, expressed	IMGA|Medtr5g097170.1	Curved DNA-binding protein chr5 41502165-41505408 E EGN_Mt100125 20111014	GO:0006457|protein folding	GO:0031072|heat shock protein binding GO:0051082|unfolded protein binding	GO:0005737|cytoplasm
pt2_01420	A	A1S	Potri.001G057100	Potri.001G057100(AS)	POPTR_0001s13770	sp|Q9FZK1|FBX6_ARATH	F-box only protein 6 OS=Arabidopsis thaliana GN=FBX6 PE=2 SV=1	AT1G27340.1	| Symbols: | Galactose oxidase/kelch repeat superfamily protein | chr1:9495741-9497857 FORWARD LENGTH=467	LOC_Os01g69940.1	protein|OsFBX32 - F-box domain containing protein, expressed	IMGA|Medtr1g018140.1	F-box/kelch-repeat protein chr1 5321626-5322774 E EGN_Mt100125 20111014	GO:0010305|leaf vascular tissue pattern formation GO:0010928|regulation of auxin mediated signaling pathway GO:0060776|simple leaf morphogenesis	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_01421	A	A1S	Potri.001G056900	Potri.001G056900(AS)	POPTR_0001s13780	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01422	A	A1S	Potri.001G056800	Potri.001G056800(AS)	POPTR_0001s13790	sp|Q9FYF9|FB76_ARATH	F-box protein At1g67340 OS=Arabidopsis thaliana GN=At1g67340 PE=1 SV=1	AT1G67340.1	| Symbols: | HCP-like superfamily protein with MYND-type zinc finger | chr1:25230323-25231622 FORWARD LENGTH=379	LOC_Os01g69270.1	protein|OsFBO2 - F-box and other domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_01423	A	A2S	Potri.001G056700	Potri.001G056700(AS) Potri.T147200(AS)	POPTR_0001s13800	sp|P10708|CB12_SOLLC	Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1	AT3G61470.1	| Symbols: LHCA2 | photosystem I light harvesting complex gene 2 | chr3:22745736-22747032 FORWARD LENGTH=257	LOC_Os07g38960.1	protein|chlorophyll A-B binding protein, putative, expressed	IMGA|Medtr5g098780.2	Chlorophyll a-b binding protein chr5 42222305-42216869 F EGN_Mt100125 20111014	GO:0009765|photosynthesis, light harvesting GO:0009768|photosynthesis, light harvesting in photosystem I GO:0015979|photosynthesis	GO:0016168|chlorophyll binding	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009579|thylakoid GO:0009782|photosystem I antenna complex GO:0016020|membrane GO:0030076|light-harvesting complex
pt2_01424	A	A2S	Potri.001G056700	Potri.001G056700(AS) Potri.T147200(AS)	POPTR_0001s13800	sp|P10708|CB12_SOLLC	Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1	AT3G61470.1	| Symbols: LHCA2 | photosystem I light harvesting complex gene 2 | chr3:22745736-22747032 FORWARD LENGTH=257	LOC_Os07g38960.1	protein|chlorophyll A-B binding protein, putative, expressed	IMGA|Medtr5g098780.2	Chlorophyll a-b binding protein chr5 42222305-42216869 F EGN_Mt100125 20111014	GO:0009765|photosynthesis, light harvesting GO:0009768|photosynthesis, light harvesting in photosystem I GO:0015979|photosynthesis	GO:0016168|chlorophyll binding	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009579|thylakoid GO:0009782|photosystem I antenna complex GO:0016020|membrane GO:0030076|light-harvesting complex
pt2_01425	A	A3S	Potri.001G056700	Potri.001G056700(AS) Potri.T147200(AS) Potri.003G171500(BS)	POPTR_0001s13800	sp|P10708|CB12_SOLLC	Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1	AT3G61470.1	| Symbols: LHCA2 | photosystem I light harvesting complex gene 2 | chr3:22745736-22747032 FORWARD LENGTH=257	LOC_Os07g38960.1	protein|chlorophyll A-B binding protein, putative, expressed	IMGA|Medtr5g098780.2	Chlorophyll a-b binding protein chr5 42222305-42216869 F EGN_Mt100125 20111014	GO:0009765|photosynthesis, light harvesting GO:0009768|photosynthesis, light harvesting in photosystem I GO:0015979|photosynthesis	GO:0016168|chlorophyll binding	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009579|thylakoid GO:0009782|photosystem I antenna complex GO:0016020|membrane GO:0030076|light-harvesting complex
pt2_01426	A	A3S	Potri.001G056600	Potri.001G056600(AS) Potri.T147300(AS) Potri.003G171800(DS)	POPTR_0001s13810	NA	NA	AT5G43260.1	| Symbols: | chaperone protein dnaJ-related | chr5:17357693-17357986 REVERSE LENGTH=97	LOC_Os02g30320.1	protein|drought-induced protein 1, putative, expressed	NA	NA	NA	NA	GO:0009507|chloroplast
pt2_01427	G	G2	NA	NA	POPTR_0001s13820	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01428	A	A1S	Potri.001G056500	Potri.001G056500(AS)	POPTR_0001s13830	NA	NA	AT1G27385.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF493 (InterPro:IPR007454); Has 76 Blast hits to 76 proteins in 23 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | chr1:9511129-9512820 REVERSE LENGTH=202	LOC_Os02g30410.2	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_01429	D	D1S	Potri.001G056400	Potri.001G056400(DS)	POPTR_0001s13840	NA	NA	NA	NA	LOC_Os11g29630.1	protein|expressed protein	NA	NA	NA	GO:0003824|catalytic activity GO:0030170|pyridoxal phosphate binding	GO:0005886|plasma membrane
pt2_01430	A	A2S	Potri.001G056300	Potri.001G056300(AS) Potri.003G172300(DS)	POPTR_0001s13850	NA	NA	AT1G67330.1	| Symbols: | Protein of unknown function (DUF579) | chr1:25214118-25214993 FORWARD LENGTH=291	LOC_Os11g29780.1	protein|plant-specific domain TIGR01627 family protein, expressed	IMGA|contig_23829_1.1	Expressed protein contig_23829 369-1129 H PREDN 20111014	GO:0008150|biological_process GO:0010167|response to nitrate GO:0015706|nitrate transport	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_01431	A	A1S	Potri.001G056200	Potri.001G056200(AS)	POPTR_0001s13860	sp|Q9C7F7|UGPI5_ARATH	Uncharacterized GPI-anchored protein At1g27950 OS=Arabidopsis thaliana GN=At1g27950 PE=1 SV=1	AT1G27950.1	| Symbols: LTPG1 | glycosylphosphatidylinositol-anchored lipid protein transfer 1 | chr1:9740740-9741991 FORWARD LENGTH=193	LOC_Os08g42040.2	protein|LTPL80 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	IMGA|contig_66220_2.1	Non-specific lipid-transfer protein contig_66220 3218-2066 F PREDN 20111014	GO:0006869|lipid transport	GO:0003674|molecular_function	GO:0005886|plasma membrane GO:0031225|anchored to membrane GO:0046658|anchored to plasma membrane
pt2_01432	A	A1S	Potri.001G056200	Potri.001G056200(AS)	POPTR_0001s13860	sp|Q9C7F7|UGPI5_ARATH	Uncharacterized GPI-anchored protein At1g27950 OS=Arabidopsis thaliana GN=At1g27950 PE=1 SV=1	AT1G27950.1	| Symbols: LTPG1 | glycosylphosphatidylinositol-anchored lipid protein transfer 1 | chr1:9740740-9741991 FORWARD LENGTH=193	LOC_Os08g42040.2	protein|LTPL80 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	IMGA|contig_66220_2.1	Non-specific lipid-transfer protein contig_66220 3218-2066 F PREDN 20111014	GO:0006869|lipid transport	GO:0003674|molecular_function	GO:0005886|plasma membrane GO:0031225|anchored to membrane GO:0046658|anchored to plasma membrane
pt2_01433	A	A1S	Potri.001G056200	Potri.001G056200(AS)	POPTR_0001s13860	sp|Q9C7F7|UGPI5_ARATH	Uncharacterized GPI-anchored protein At1g27950 OS=Arabidopsis thaliana GN=At1g27950 PE=1 SV=1	AT1G27950.1	| Symbols: LTPG1 | glycosylphosphatidylinositol-anchored lipid protein transfer 1 | chr1:9740740-9741991 FORWARD LENGTH=193	LOC_Os08g42040.2	protein|LTPL80 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	IMGA|contig_66220_2.1	Non-specific lipid-transfer protein contig_66220 3218-2066 F PREDN 20111014	GO:0006869|lipid transport	GO:0003674|molecular_function	GO:0005886|plasma membrane GO:0031225|anchored to membrane GO:0046658|anchored to plasma membrane
pt2_01434	A	A1S	Potri.001G056100	Potri.001G056100(AS)	POPTR_0001s13870	sp|P59326|YTHD1_MOUSE	YTH domain family protein 1 OS=Mus musculus GN=Ythdf1 PE=2 SV=1	AT3G13060.2	| Symbols: ECT5 | evolutionarily conserved C-terminal region 5 | chr3:4180625-4183632 FORWARD LENGTH=634	LOC_Os08g44200.1	protein|ECT5, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005829|cytosol
pt2_01435	A	A2S	Potri.001G056000	Potri.001G056000(AS) Potri.003G172500(DS)	POPTR_0001s13880	sp|Q8GZ43|YZR3_ARATH	RanBP2-type zinc finger protein At1g67325 OS=Arabidopsis thaliana GN=At1g67325 PE=1 SV=1	AT1G67325.1	| Symbols: | Ran BP2/NZF zinc finger-like superfamily protein | chr1:25209825-25212412 REVERSE LENGTH=287	LOC_Os08g41010.5	protein|zinc finger family protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0009507|chloroplast
pt2_01436	A	A1S	Potri.001G055900	Potri.001G055900(AS)	POPTR_0001s13890	sp|A2YGR5|SPL12_ORYSI	Squamosa promoter-binding-like protein 12 OS=Oryza sativa subsp. indica GN=SPL12 PE=2 SV=1	AT5G43270.1	| Symbols: SPL2 | squamosa promoter binding protein-like 2 | chr5:17360527-17362143 REVERSE LENGTH=419	LOC_Os06g49010.5	protein|OsSPL12 - SBP-box gene family member, expressed	IMGA|Medtr5g046670.1	Squamosa promoter binding protein chr5 20048386-20043614 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0048510|regulation of timing of transition from vegetative to reproductive phase GO:0048653|anther development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_01437	A	A1S	Potri.001G055700	Potri.001G055700(AS)	POPTR_0001s13900	sp|Q9LQ12|4CLL1_ARATH	4-coumarate--CoA ligase-like 1 OS=Arabidopsis thaliana GN=4CLL1 PE=2 SV=1	AT1G62940.1	| Symbols: ACOS5 | acyl-CoA synthetase 5 | chr1:23310554-23312747 FORWARD LENGTH=542	LOC_Os04g24530.1	protein|AMP-binding domain containing protein, expressed	IMGA|Medtr5g007640.1	4-coumarate CoA ligase chr5 1207155-1213155 E EGN_Mt100125 20111014	GO:0001676|long-chain fatty acid metabolic process GO:0010584|pollen exine formation GO:0046949|fatty-acyl-CoA biosynthetic process GO:0080110|sporopollenin biosynthetic process	GO:0003824|catalytic activity GO:0004467|long-chain fatty acid-CoA ligase activity GO:0016207|4-coumarate-CoA ligase activity GO:0031956|medium-chain fatty acid-CoA ligase activity	GO:0005737|cytoplasm
pt2_01438	A	A1S	Potri.001G055600	Potri.001G055600(AS)	POPTR_0001s13910	NA	NA	AT5G26594.1	| Symbols: ARR24, RR24 | response regulator 24 | chr5:9269282-9270254 FORWARD LENGTH=139	NA	NA	NA	NA	GO:0000160|two-component signal transduction system (phosphorelay) GO:0006355|regulation of transcription, DNA-dependent	GO:0000156|two-component response regulator activity	GO:0009507|chloroplast
pt2_01439	A	A1S	Potri.001G055500	Potri.001G055500(AS)	POPTR_0001s13920	sp|Q9M8Y4|ARR22_ARATH	Two-component response regulator ARR22 OS=Arabidopsis thaliana GN=ARR22 PE=2 SV=1	AT3G04280.3	| Symbols: ARR22, RR22 | response regulator 22 | chr3:1130138-1130689 REVERSE LENGTH=142	NA	NA	NA	NA	GO:0000160|two-component signal transduction system (phosphorelay) GO:0006355|regulation of transcription, DNA-dependent GO:0007623|circadian rhythm GO:0009736|cytokinin mediated signaling pathway GO:0010048|vernalization response	GO:0000156|two-component response regulator activity GO:0008969|phosphohistidine phosphatase activity	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_01440	A	A1S	Potri.001G055400	Potri.001G055400(AS)	POPTR_0001s13930	NA	NA	AT1G67350.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photorespiration; LOCATED IN: mitochondrial membrane, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:25235826-25236122 FORWARD LENGTH=98	LOC_Os03g48110.1	protein|expressed protein	IMGA|contig_61297_1.1	RW1-like protein contig_61297 68-1822 F PREDN 20111014	GO:0006511|ubiquitin-dependent protein catabolic process GO:0009853|photorespiration GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005747|mitochondrial respiratory chain complex I GO:0031966|mitochondrial membrane GO:0045271|respiratory chain complex I
pt2_01441	A	A1S	Potri.001G055300	Potri.001G055300(AS)	POPTR_0001s13940	sp|Q9FYF7|Y1736_ARATH	REF/SRPP-like protein At1g67360 OS=Arabidopsis thaliana GN=At1g67360 PE=2 SV=1	AT1G67360.1	| Symbols: | Rubber elongation factor protein (REF) | chr1:25237072-25237913 REVERSE LENGTH=240	LOC_Os07g47510.1	protein|stress-related protein, putative, expressed	NA	NA	GO:0008150|biological_process	NA	GO:0005737|cytoplasm GO:0005773|vacuole
pt2_01442	A	A1S	Potri.001G055200	Potri.001G055200(AS)	POPTR_0001s13950	sp|Q5M7C8|HORM1_XENLA	HORMA domain-containing protein 1 OS=Xenopus laevis GN=hormad1 PE=2 SV=1	AT1G67370.1	| Symbols: ASY1, ATASY1 | DNA-binding HORMA family protein | chr1:25239347-25243713 REVERSE LENGTH=596	LOC_Os09g32930.3	protein|retrotransposon protein, putative, SINE subclass, expressed	NA	NA	GO:0006302|double-strand break repair GO:0007062|sister chromatid cohesion GO:0007126|meiosis GO:0007129|synapsis GO:0007130|synaptonemal complex assembly GO:0007131|reciprocal meiotic recombination GO:0010212|response to ionizing radiation GO:0010332|response to gamma radiation GO:0032204|regulation of telomere maintenance GO:0032504|multicellular organism reproduction GO:0042138|meiotic DNA double-strand break formation GO:0043247|telomere maintenance in response to DNA damage GO:0045132|meiotic chromosome segregation GO:0051026|chiasma assembly	GO:0003677|DNA binding	GO:0000785|chromatin GO:0000794|condensed nuclear chromosome GO:0005634|nucleus GO:0005654|nucleoplasm
pt2_01443	A	A1S	Potri.001G055100	Potri.001G055100(AS)	POPTR_0001s13960	sp|Q9C7G0|MA658_ARATH	65-kDa microtubule-associated protein 8 OS=Arabidopsis thaliana GN=MAP65-8 PE=1 SV=2	AT1G27920.1	| Symbols: MAP65-8 | microtubule-associated protein 65-8 | chr1:9727106-9729848 FORWARD LENGTH=562	LOC_Os08g41890.1	protein|microtubule associated protein, putative, expressed	IMGA|Medtr5g093860.1	Microtubule-associated protein MAP65-1a chr5 39942422-39947104 E EGN_Mt100125 20111014	GO:0000226|microtubule cytoskeleton organization GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005819|spindle GO:0005874|microtubule GO:0009524|phragmoplast
pt2_01444	A	A1S	Potri.001G055000	Potri.001G055000(AS)	POPTR_0001s13970	NA	NA	AT5G43250.1	| Symbols: NF-YC13 | nuclear factor Y, subunit C13 | chr5:17356174-17356566 REVERSE LENGTH=130	LOC_Os01g08790.1	protein|histone-like transcription factor and archaeal histone, putative, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_01445	A	A2S	Potri.001G054900	Potri.001G054900(AS) Potri.003G173400(DS)	POPTR_0001s13980	sp|P92792|TOM20_SOLTU	Mitochondrial import receptor subunit TOM20 OS=Solanum tuberosum GN=TOM20 PE=1 SV=1	AT1G27390.1	| Symbols: TOM20-2 | translocase outer membrane 20-2 | chr1:9513469-9514912 REVERSE LENGTH=210	LOC_Os01g69250.1	protein|mitochondrial import receptor subunit TOM20, putative, expressed	NA	NA	GO:0006626|protein targeting to mitochondrion GO:0045040|protein import into mitochondrial outer membrane	GO:0015450|P-P-bond-hydrolysis-driven protein transmembrane transporter activity GO:0046872|metal ion binding	GO:0005739|mitochondrion GO:0005741|mitochondrial outer membrane GO:0005742|mitochondrial outer membrane translocase complex GO:0005743|mitochondrial inner membrane GO:0005744|mitochondrial inner membrane presequence translocase complex GO:0022626|cytosolic ribosome
pt2_01446	A	A1S	Potri.001G054800	Potri.001G054800(AS)	POPTR_0001s13990	sp|O65012|C78A4_PINRA	Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 PE=2 SV=1	AT1G74110.1	| Symbols: CYP78A10 | cytochrome P450, family 78, subfamily A, polypeptide 10 | chr1:27866667-27868368 REVERSE LENGTH=537	LOC_Os11g29720.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g045250.1	Cytochrome P450 78A11 chr5 19442194-19440472 E EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_01447	A	A1S	Potri.001G054700	Potri.001G054700(AS)	POPTR_0001s14000	sp|Q54GB2|CTSL2_DICDI	CTD small phosphatase-like protein 2 OS=Dictyostelium discoideum GN=ctdspl2 PE=3 SV=1	AT5G11860.4	| Symbols: | SCP1-like small phosphatase 5 | chr5:3822024-3823395 REVERSE LENGTH=305	LOC_Os03g63300.1	protein|NLI interacting factor-like phosphatase, putative, expressed	IMGA|Medtr5g045920.1	CTD small phosphatase-like protein chr5 19725690-19724505 H EGN_Mt100125 20111014	GO:0006470|protein dephosphorylation GO:0006914|autophagy	GO:0008420|CTD phosphatase activity GO:0016791|phosphatase activity	GO:0000775|chromosome, centromeric region GO:0005634|nucleus GO:0005694|chromosome GO:0005737|cytoplasm
pt2_01448	A	A1S	Potri.001G054600	Potri.001G054600(AS)	POPTR_0001s14010	sp|Q9FJD5|LAC17_ARATH	Laccase-17 OS=Arabidopsis thaliana GN=LAC17 PE=2 SV=1	AT5G60020.1	| Symbols: LAC17, ATLAC17 | laccase 17 | chr5:24168072-24170223 FORWARD LENGTH=577	LOC_Os01g62480.1	protein|laccase precursor protein, putative, expressed	IMGA|Medtr5g020600.1	Laccase-11 chr5 7633298-7636466 E EGN_Mt100125 20111014	GO:0009698|phenylpropanoid metabolic process GO:0009809|lignin biosynthetic process GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process GO:0046274|lignin catabolic process GO:0055114|oxidation-reduction process	GO:0005507|copper ion binding GO:0016491|oxidoreductase activity GO:0052716|hydroquinone:oxygen oxidoreductase activity	GO:0005576|extracellular region GO:0048046|apoplast
pt2_01449	A	A2S	Potri.001G054500	Potri.001G054500(AS) Potri.003G173800(BS)	POPTR_0001s14030	sp|Q8RWA7|NDADA_ARATH	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-A OS=Arabidopsis thaliana GN=MEE4 PE=2 SV=1	AT1G04630.1	| Symbols: MEE4 | GRIM-19 protein | chr1:1289921-1290986 REVERSE LENGTH=143	LOC_Os03g09210.1	protein|NADH dehydrogenase 1 alpha subcomplex subunit 13, putative, expressed	NA	NA	GO:0009793|embryo development ending in seed dormancy GO:0009853|photorespiration	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0005747|mitochondrial respiratory chain complex I GO:0009507|chloroplast GO:0031966|mitochondrial membrane GO:0045271|respiratory chain complex I
pt2_01450	A	A1S	Potri.001G054400	Potri.001G054400(AS)	POPTR_0001s14040	sp|Q05046|CH62_CUCMA	Chaperonin CPN60-2, mitochondrial OS=Cucurbita maxima GN=CPN60-2 PE=1 SV=1	AT3G23990.1	| Symbols: HSP60, HSP60-3B | heat shock protein 60 | chr3:8669013-8672278 FORWARD LENGTH=577	LOC_Os10g32550.1	protein|T-complex protein, putative, expressed	IMGA|Medtr1g090130.1	Chaperonin CPN60-2 chr1 24825922-24820135 F EGN_Mt100125 20111014	GO:0006457|protein folding GO:0006626|protein targeting to mitochondrion GO:0007005|mitochondrion organization GO:0009408|response to heat GO:0009644|response to high light intensity GO:0034976|response to endoplasmic reticulum stress GO:0042026|protein refolding GO:0042542|response to hydrogen peroxide GO:0044267|cellular protein metabolic process GO:0046686|response to cadmium ion GO:0051131|chaperone-mediated protein complex assembly	GO:0005507|copper ion binding GO:0005524|ATP binding	GO:0005739|mitochondrion GO:0005759|mitochondrial matrix GO:0005774|vacuolar membrane GO:0005829|cytosol GO:0022626|cytosolic ribosome
pt2_01451	A	A1S	Potri.001G054300	Potri.001G054300(AS)	POPTR_0001s14050	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01452	R	R	NA	NA	POPTR_0001s14060	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01453	A	A1S	Potri.001G054100	Potri.001G054100(AS)	POPTR_0001s14070	NA	NA	AT4G13580.1	| Symbols: | Disease resistance-responsive (dirigent-like protein) family protein | chr4:7900427-7901161 FORWARD LENGTH=244	LOC_Os03g05030.1	protein|dirigent, putative, expressed	NA	NA	NA	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_01454	A	A1S	Potri.001G054000	Potri.001G054000(AS)	POPTR_0001s14080	NA	NA	AT3G24020.1	| Symbols: | Disease resistance-responsive (dirigent-like protein) family protein | chr3:8678827-8679558 FORWARD LENGTH=243	LOC_Os03g05030.1	protein|dirigent, putative, expressed	NA	NA	NA	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_01455	A	A1S	Potri.001G053900	Potri.001G053900(AS)	POPTR_0001s14090	sp|C4L8H9|THIM_TOLAT	Hydroxyethylthiazole kinase OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=thiM PE=3 SV=1	AT3G24030.1	| Symbols: | hydroxyethylthiazole kinase family protein | chr3:8679862-8680812 REVERSE LENGTH=276	NA	NA	NA	NA	GO:0009228|thiamine biosynthetic process	GO:0003824|catalytic activity GO:0004417|hydroxyethylthiazole kinase activity	GO:0005575|cellular_component
pt2_01456	A	A1S	Potri.001G053800	Potri.001G053800(AS)	POPTR_0001s14100	sp|Q9EPI1|XYLT1_RAT	Xylosyltransferase 1 (Fragment) OS=Rattus norvegicus GN=Xylt1 PE=2 SV=1	AT3G24040.1	| Symbols: | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein | chr3:8681118-8683211 REVERSE LENGTH=417	LOC_Os12g44240.1	protein|N-acetylglucosaminyltransferase, putative, expressed	IMGA|Medtr1g108280.1	Xylosyltransferase chr1 31817214-31813081 E EGN_Mt100125 20111014	GO:0006084|acetyl-CoA metabolic process GO:0016126|sterol biosynthetic process GO:0016132|brassinosteroid biosynthetic process	GO:0008375|acetylglucosaminyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups	GO:0005794|Golgi apparatus GO:0016020|membrane
pt2_01457	A	A1S	Potri.001G053700	Potri.001G053700(AS)	POPTR_0001s14110	NA	NA	AT2G33180.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 57 Blast hits to 57 proteins in 22 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). | chr2:14066479-14067314 FORWARD LENGTH=166	LOC_Os09g30410.2	protein|expressed protein	NA	NA	GO:0006098|pentose-phosphate shunt GO:0008150|biological_process GO:0009073|aromatic amino acid family biosynthetic process GO:0016226|iron-sulfur cluster assembly GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_01458	A	A1S	Potri.001G053700	Potri.001G053700(AS)	POPTR_0001s14110	NA	NA	AT2G33180.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 57 Blast hits to 57 proteins in 22 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). | chr2:14066479-14067314 FORWARD LENGTH=166	LOC_Os09g30410.2	protein|expressed protein	NA	NA	GO:0006098|pentose-phosphate shunt GO:0008150|biological_process GO:0009073|aromatic amino acid family biosynthetic process GO:0016226|iron-sulfur cluster assembly GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_01459	A	A1S	Potri.001G053700	Potri.001G053700(AS)	POPTR_0001s14110	NA	NA	AT2G33180.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 57 Blast hits to 57 proteins in 22 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). | chr2:14066479-14067314 FORWARD LENGTH=166	LOC_Os09g30410.2	protein|expressed protein	NA	NA	GO:0006098|pentose-phosphate shunt GO:0008150|biological_process GO:0009073|aromatic amino acid family biosynthetic process GO:0016226|iron-sulfur cluster assembly GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_01460	A	A1S	Potri.001G053700	Potri.001G053700(AS)	POPTR_0001s14110	NA	NA	AT2G33180.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 57 Blast hits to 57 proteins in 22 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). | chr2:14066479-14067314 FORWARD LENGTH=166	LOC_Os09g30410.2	protein|expressed protein	NA	NA	GO:0006098|pentose-phosphate shunt GO:0008150|biological_process GO:0009073|aromatic amino acid family biosynthetic process GO:0016226|iron-sulfur cluster assembly GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_01461	A	A2S	Potri.001G053600	Potri.001G053600(AS) Potri.003G174600(AS)	POPTR_0001s14120	sp|Q9T0H9|GDT12_ARATH	GDT1-like protein 2, chloroplastic OS=Arabidopsis thaliana GN=At4g13590 PE=1 SV=2	AT4G13590.1	| Symbols: | Uncharacterized protein family (UPF0016) | chr4:7901369-7903792 REVERSE LENGTH=359	LOC_Os11g34180.1	protein|uncharacterized protein family UPF0016 domain containing protein, expressed	IMGA|Medtr5g009810.1	Transmembrane protein chr5 2229240-2235151 H EGN_Mt100125 20111014	NA	NA	GO:0009507|chloroplast GO:0009706|chloroplast inner membrane GO:0009941|chloroplast envelope GO:0016020|membrane
pt2_01462	A	A1S	Potri.001G053500	Potri.001G053500(AS)	POPTR_0001s14130	sp|Q8LAU9|GATA1_ARATH	GATA transcription factor 1 OS=Arabidopsis thaliana GN=GATA1 PE=2 SV=2	AT3G24050.1	| Symbols: GATA1 | GATA transcription factor 1 | chr3:8686060-8687462 FORWARD LENGTH=274	LOC_Os04g45650.2	protein|expressed protein	IMGA|Medtr5g007600.1	GATA transcription factor chr5 1186271-1187716 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0007623|circadian rhythm	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding GO:0043565|sequence-specific DNA binding GO:0044212|transcription regulatory region DNA binding	GO:0005634|nucleus
pt2_01463	A	A1S	Potri.001G053400	Potri.001G053400(AS)	POPTR_0001s14140	sp|O49318|Y2317_ARATH	Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1	AT2G33170.1	| Symbols: | Leucine-rich repeat receptor-like protein kinase family protein | chr2:14056371-14059829 REVERSE LENGTH=1124	LOC_Os04g42700.1	protein|receptor-like protein kinase precursor, putative, expressed	IMGA|Medtr1g079520.1	Pentatricopeptide repeat-containing protein chr1 19861760-19847347 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006486|protein glycosylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_01464	A	A1S	Potri.001G053300	Potri.001G053300(AS)	POPTR_0001s14150	NA	NA	AT3G24060.1	| Symbols: | Plant self-incompatibility protein S1 family | chr3:8689589-8690032 REVERSE LENGTH=147	NA	NA	IMGA|Medtr1g087960.1	Self-incompatibility protein chr1 23774336-23774791 H EGN_Mt100125 20111014	GO:0006863|purine nucleobase transport GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_01465	A	A1S	Potri.001G053200	Potri.001G053200(AS)	POPTR_0001s14160	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006863|purine nucleobase transport GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_01466	A	A1S	Potri.001G053100	Potri.001G053100(AS)	POPTR_0001s14170	NA	NA	AT3G24060.1	| Symbols: | Plant self-incompatibility protein S1 family | chr3:8689589-8690032 REVERSE LENGTH=147	NA	NA	NA	NA	GO:0006863|purine nucleobase transport GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_01467	A	A1S	Potri.001G053000	Potri.001G053000(AS)	POPTR_0001s14180	NA	NA	AT1G04650.1	| Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr1:1294893-1298903 REVERSE LENGTH=997	LOC_Os03g05040.1	protein|expressed protein	IMGA|Medtr1g090050.1	hypothetical protein chr1 24774301-24779924 H EGN_Mt100125 20111014	NA	NA	GO:0005575|cellular_component
pt2_01468	A	A1S	Potri.001G052900	Potri.001G052900(AS)	POPTR_0001s14190	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01469	C	C1S	Potri.001G052800	Potri.001G052800(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01470	A	A1S	Potri.001G052600	Potri.001G052600(AS)	POPTR_0001s14210	NA	NA	AT1G04670.1	| Symbols: | unknown protein; Has 40 Blast hits to 40 proteins in 14 species: Archae - 2; Bacteria - 5; Metazoa - 1; Fungi - 2; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:1301985-1302532 FORWARD LENGTH=126	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_01471	A	A1S	Potri.001G052500	Potri.001G052500(AS)	POPTR_0001s14220	sp|Q9LHP4|RCH2_ARATH	Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1	AT3G24240.1	| Symbols: | Leucine-rich repeat receptor-like protein kinase family protein | chr3:8780551-8784150 FORWARD LENGTH=1141	LOC_Os04g04330.2	protein|receptor-like protein kinase 2 precursor, putative, expressed	IMGA|Medtr5g045910.1	Receptor-like protein kinase chr5 19714325-19723568 E EGN_Mt100125 20111014	GO:0000041|transition metal ion transport GO:0002237|response to molecule of bacterial origin GO:0006468|protein phosphorylation GO:0007165|signal transduction GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway GO:0010103|stomatal complex morphogenesis GO:0010359|regulation of anion channel activity GO:0048443|stamen development	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	NA
pt2_01472	B	B1S	Potri.001G052400	Potri.001G052400(BS)	POPTR_0001s14230	sp|F6HS55|ITPA_VITVI	Inosine triphosphate pyrophosphatase OS=Vitis vinifera GN=VIT_05s0051g00580 PE=2 SV=1	AT4G13720.1	| Symbols: | Inosine triphosphate pyrophosphatase family protein | chr4:7967166-7968894 REVERSE LENGTH=206	LOC_Os10g31940.1	protein|inosine triphosphate pyrophosphatase, putative, expressed	NA	NA	NA	GO:0016462|pyrophosphatase activity GO:0016787|hydrolase activity	GO:0005737|cytoplasm
pt2_01473	A	A1S	Potri.001G052300	Potri.001G052300(AS)	POPTR_0001s14240	sp|Q944R1|PLY15_ARATH	Probable pectate lyase 15 OS=Arabidopsis thaliana GN=At4g13710 PE=2 SV=1	AT4G13710.1	| Symbols: | Pectin lyase-like superfamily protein | chr4:7962550-7966012 FORWARD LENGTH=470	LOC_Os04g05050.1	protein|pectate lyase precursor, putative, expressed	IMGA|AC235753_8.1	Pectate lyase AC235753.2 24915-27580 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0016829|lyase activity GO:0030570|pectate lyase activity	GO:0005576|extracellular region
pt2_01474	C	C1S	Potri.001G052200	Potri.001G052200(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	GO:0003993|acid phosphatase activity GO:0004722|protein serine/threonine phosphatase activity GO:0016787|hydrolase activity GO:0046872|metal ion binding	GO:0005576|extracellular region
pt2_01475	A	A1S	Potri.001G052100	Potri.001G052100(AS)	POPTR_0001s14260	sp|O23016|KCAB_ARATH	Probable voltage-gated potassium channel subunit beta OS=Arabidopsis thaliana GN=KAB1 PE=1 SV=1	AT1G04690.1	| Symbols: KAB1, KV-BETA1 | potassium channel beta subunit 1 | chr1:1313662-1315420 FORWARD LENGTH=328	LOC_Os02g57240.1	protein|oxidoreductase, aldo/keto reductase family protein, putative, expressed	NA	NA	GO:0006813|potassium ion transport GO:0055085|transmembrane transport	GO:0005267|potassium channel activity	GO:0005737|cytoplasm GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane
pt2_01476	A	A1S	Potri.001G052000	Potri.001G052000(AS)	POPTR_0001s14270	sp|Q55GU0|Y9955_DICDI	Probable serine/threonine-protein kinase DDB_G0267514 OS=Dictyostelium discoideum GN=DDB_G0267514 PE=3 SV=1	AT1G04700.1	| Symbols: | PB1 domain-containing protein tyrosine kinase | chr1:1316919-1320653 FORWARD LENGTH=1042	LOC_Os12g40279.1	protein|protein kinase domain containing protein, expressed	IMGA|Medtr5g023150.1	Dual specificity protein kinase pyk2 chr5 8944735-8953212 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004712|protein serine/threonine/tyrosine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005829|cytosol GO:0005886|plasma membrane
pt2_01477	A	A1S	Potri.001G051900	Potri.001G051900(AS)	POPTR_0001s14280	sp|Q56WD9|THIK2_ARATH	3-ketoacyl-CoA thiolase 2, peroxisomal OS=Arabidopsis thaliana GN=PED1 PE=1 SV=2	AT2G33150.1	| Symbols: PKT3, PED1, KAT2 | peroxisomal 3-ketoacyl-CoA thiolase 3 | chr2:14047814-14050983 REVERSE LENGTH=462	LOC_Os02g57260.1	protein|3-ketoacyl-CoA thiolase, peroxisomal precursor, putative, expressed	IMGA|Medtr5g098310.1	"Acetyl-CoA acetyltransferase, cytosolic" chr5 42013142-42007793 F EGN_Mt100125 20111014	GO:0006635|fatty acid beta-oxidation GO:0008152|metabolic process GO:0009407|toxin catabolic process GO:0009611|response to wounding GO:0009695|jasmonic acid biosynthetic process GO:0009789|positive regulation of abscisic acid mediated signaling pathway GO:0010111|glyoxysome organization GO:0019395|fatty acid oxidation GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	GO:0003824|catalytic activity GO:0003988|acetyl-CoA C-acyltransferase activity GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0005730|nucleolus GO:0005739|mitochondrion GO:0005774|vacuolar membrane GO:0005777|peroxisome GO:0009507|chloroplast GO:0016020|membrane
pt2_01478	A	A1S	Potri.001G051800	Potri.001G051800(AS)	POPTR_0001s14290	sp|Q56WD9|THIK2_ARATH	3-ketoacyl-CoA thiolase 2, peroxisomal OS=Arabidopsis thaliana GN=PED1 PE=1 SV=2	AT2G33150.1	| Symbols: PKT3, PED1, KAT2 | peroxisomal 3-ketoacyl-CoA thiolase 3 | chr2:14047814-14050983 REVERSE LENGTH=462	LOC_Os10g31950.1	protein|3-ketoacyl-CoA thiolase, peroxisomal precursor, putative, expressed	IMGA|Medtr5g098310.1	"Acetyl-CoA acetyltransferase, cytosolic" chr5 42013142-42007793 F EGN_Mt100125 20111014	GO:0006635|fatty acid beta-oxidation GO:0008152|metabolic process GO:0009407|toxin catabolic process GO:0009611|response to wounding GO:0009695|jasmonic acid biosynthetic process GO:0009789|positive regulation of abscisic acid mediated signaling pathway GO:0010111|glyoxysome organization GO:0019395|fatty acid oxidation GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	GO:0003824|catalytic activity GO:0003988|acetyl-CoA C-acyltransferase activity GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0005730|nucleolus GO:0005739|mitochondrion GO:0005774|vacuolar membrane GO:0005777|peroxisome GO:0009507|chloroplast GO:0016020|membrane
pt2_01479	A	A1S	Potri.001G051700	Potri.001G051700(AS)	POPTR_0001s14300	sp|Q7UJ69|ILVD_RHOBA	Dihydroxy-acid dehydratase OS=Rhodopirellula baltica (strain SH1) GN=ilvD PE=3 SV=2	AT3G23940.1	| Symbols: | dehydratase family | chr3:8648780-8652323 FORWARD LENGTH=608	LOC_Os08g44530.1	protein|dihydroxy-acid dehydratase, putative, expressed	NA	NA	GO:0008152|metabolic process GO:0009082|branched-chain amino acid biosynthetic process GO:0009220|pyrimidine ribonucleotide biosynthetic process GO:0009555|pollen development	GO:0003824|catalytic activity GO:0004160|dihydroxy-acid dehydratase activity GO:0005507|copper ion binding	GO:0009507|chloroplast GO:0009536|plastid GO:0009570|chloroplast stroma
pt2_01480	A	A1S	Potri.001G051600	Potri.001G051600(AS)	POPTR_0001s14310	sp|P48386|CHS1_CAMSI	Chalcone synthase 1 OS=Camellia sinensis GN=CHS1 PE=2 SV=1	AT5G13930.1	| Symbols: CHS, TT4, ATCHS | Chalcone and stilbene synthase family protein | chr5:4488762-4490035 FORWARD LENGTH=395	LOC_Os11g32650.1	protein|chalcone synthase, putative, expressed	IMGA|Medtr5g007760.1	Chalcone synthase chr5 1267204-1268814 E EGN_Mt100125 20111014	GO:0006979|response to oxidative stress GO:0008152|metabolic process GO:0009058|biosynthetic process GO:0009411|response to UV GO:0009611|response to wounding GO:0009629|response to gravity GO:0009715|chalcone biosynthetic process GO:0009718|anthocyanin-containing compound biosynthetic process GO:0009733|response to auxin stimulus GO:0009744|response to sucrose stimulus GO:0009753|response to jasmonic acid stimulus GO:0009813|flavonoid biosynthetic process GO:0009926|auxin polar transport GO:0010224|response to UV-B GO:0031540|regulation of anthocyanin biosynthetic process	GO:0003824|catalytic activity GO:0005515|protein binding GO:0016210|naringenin-chalcone synthase activity GO:0016746|transferase activity, transferring acyl groups GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005783|endoplasmic reticulum GO:0009705|plant-type vacuole membrane
pt2_01481	A	A1S	Potri.001G051500	Potri.001G051500(AS)	POPTR_0001s14320	sp|P48386|CHS1_CAMSI	Chalcone synthase 1 OS=Camellia sinensis GN=CHS1 PE=2 SV=1	AT5G13930.1	| Symbols: CHS, TT4, ATCHS | Chalcone and stilbene synthase family protein | chr5:4488762-4490035 FORWARD LENGTH=395	LOC_Os11g32650.1	protein|chalcone synthase, putative, expressed	IMGA|Medtr5g007760.1	Chalcone synthase chr5 1267204-1268814 E EGN_Mt100125 20111014	GO:0006979|response to oxidative stress GO:0008152|metabolic process GO:0009058|biosynthetic process GO:0009411|response to UV GO:0009611|response to wounding GO:0009629|response to gravity GO:0009715|chalcone biosynthetic process GO:0009718|anthocyanin-containing compound biosynthetic process GO:0009733|response to auxin stimulus GO:0009744|response to sucrose stimulus GO:0009753|response to jasmonic acid stimulus GO:0009813|flavonoid biosynthetic process GO:0009926|auxin polar transport GO:0010224|response to UV-B GO:0031540|regulation of anthocyanin biosynthetic process	GO:0003824|catalytic activity GO:0005515|protein binding GO:0016210|naringenin-chalcone synthase activity GO:0016746|transferase activity, transferring acyl groups GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005783|endoplasmic reticulum GO:0009705|plant-type vacuole membrane
pt2_01482	A	A2S	Potri.001G051400	Potri.001G051400(AS) Potri.003G177000(DS)	POPTR_0001s14330	sp|Q86YJ7|AN13B_HUMAN	Ankyrin repeat domain-containing protein 13B OS=Homo sapiens GN=ANKRD13B PE=2 SV=4	AT1G04780.1	| Symbols: | Ankyrin repeat family protein | chr1:1340891-1342965 REVERSE LENGTH=664	LOC_Os07g25460.1	protein|ankyrin repeat domain containing protein, expressed	IMGA|Medtr1g080310.1	Ankyrin repeat domain-containing protein 13C-B chr1 20193483-20196757 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_01483	A	A2S	Potri.001G051400	Potri.001G051400(AS) Potri.003G177000(DS)	POPTR_0001s14340	sp|Q86YJ7|AN13B_HUMAN	Ankyrin repeat domain-containing protein 13B OS=Homo sapiens GN=ANKRD13B PE=2 SV=4	AT1G04780.1	| Symbols: | Ankyrin repeat family protein | chr1:1340891-1342965 REVERSE LENGTH=664	LOC_Os07g25460.1	protein|ankyrin repeat domain containing protein, expressed	IMGA|Medtr1g080310.1	Ankyrin repeat domain-containing protein 13C-B chr1 20193483-20196757 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_01484	A	A1S	Potri.001G051300	Potri.001G051300(AS)	POPTR_0001s14350	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process GO:0009736|cytokinin mediated signaling pathway	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01485	A	A1S	Potri.001G051200	Potri.001G051200(AS)	POPTR_0001s14360	sp|Q8R1S0|COQ6_MOUSE	Ubiquinone biosynthesis monooxygenase COQ6 OS=Mus musculus GN=Coq6 PE=2 SV=2	AT3G24200.1	| Symbols: | FAD/NAD(P)-binding oxidoreductase family protein | chr3:8748095-8751575 REVERSE LENGTH=505	LOC_Os03g62260.1	protein|FAD binding domain containing protein, expressed	NA	NA	GO:0006744|ubiquinone biosynthetic process GO:0008152|metabolic process GO:0019243|methylglyoxal catabolic process to D-lactate GO:0055114|oxidation-reduction process	GO:0004497|monooxygenase activity GO:0016491|oxidoreductase activity GO:0016709|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen GO:0050660|flavin adenine dinucleotide binding	GO:0005739|mitochondrion
pt2_01486	A	A1S	Potri.001G051100	Potri.001G051100(AS)	POPTR_0001s14370	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01487	A	A1S	Potri.001G051000	Potri.001G051000(AS)	POPTR_0001s14380	sp|Q9M8Y4|ARR22_ARATH	Two-component response regulator ARR22 OS=Arabidopsis thaliana GN=ARR22 PE=2 SV=1	AT5G26594.1	| Symbols: ARR24, RR24 | response regulator 24 | chr5:9269282-9270254 FORWARD LENGTH=139	LOC_Os04g13480.1	protein|response regulator receiver domain containing protein, expressed	NA	NA	GO:0000160|two-component signal transduction system (phosphorelay) GO:0006355|regulation of transcription, DNA-dependent	GO:0000156|two-component response regulator activity	GO:0009507|chloroplast
pt2_01488	A	A1S	Potri.001G050900	Potri.001G050900(AS)	POPTR_0001s14390	sp|Q9M8Y4|ARR22_ARATH	Two-component response regulator ARR22 OS=Arabidopsis thaliana GN=ARR22 PE=2 SV=1	AT3G04280.3	| Symbols: ARR22, RR22 | response regulator 22 | chr3:1130138-1130689 REVERSE LENGTH=142	NA	NA	NA	NA	GO:0000160|two-component signal transduction system (phosphorelay) GO:0006355|regulation of transcription, DNA-dependent GO:0007623|circadian rhythm GO:0009736|cytokinin mediated signaling pathway GO:0010048|vernalization response	GO:0000156|two-component response regulator activity GO:0008969|phosphohistidine phosphatase activity	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_01489	A	A1S	Potri.001G050800	Potri.001G050800(AS)	POPTR_0001s14400	sp|Q9M8Y4|ARR22_ARATH	Two-component response regulator ARR22 OS=Arabidopsis thaliana GN=ARR22 PE=2 SV=1	AT5G26594.1	| Symbols: ARR24, RR24 | response regulator 24 | chr5:9269282-9270254 FORWARD LENGTH=139	LOC_Os03g53100.1	protein|response regulator receiver domain containing protein, expressed	NA	NA	GO:0000160|two-component signal transduction system (phosphorelay) GO:0006355|regulation of transcription, DNA-dependent	GO:0000156|two-component response regulator activity	GO:0009507|chloroplast
pt2_01490	A	A1S	Potri.001G050700	Potri.001G050700(AS)	POPTR_0001s14410	sp|Q55680|Y005_SYNY3	Uncharacterized protein sll0005 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0005 PE=3 SV=1	AT3G24190.1	| Symbols: | Protein kinase superfamily protein | chr3:8743319-8747703 FORWARD LENGTH=793	LOC_Os02g57160.1	protein| ELMO/CED-12 family protein, putative, expressed	IMGA|contig_75251_1.1	Possible protein kinase ABC1 family protein contig_75251 433-1707 E PREDN 20111014	GO:0006468|protein phosphorylation GO:0009744|response to sucrose stimulus GO:0009813|flavonoid biosynthetic process GO:0010224|response to UV-B	GO:0004672|protein kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_01491	A	A1S	Potri.001G050700	Potri.001G050700(AS)	POPTR_0001s14410	sp|Q55680|Y005_SYNY3	Uncharacterized protein sll0005 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0005 PE=3 SV=1	AT3G24190.1	| Symbols: | Protein kinase superfamily protein | chr3:8743319-8747703 FORWARD LENGTH=793	LOC_Os02g57160.1	protein| ELMO/CED-12 family protein, putative, expressed	IMGA|contig_75251_1.1	Possible protein kinase ABC1 family protein contig_75251 433-1707 E PREDN 20111014	GO:0006468|protein phosphorylation GO:0009744|response to sucrose stimulus GO:0009813|flavonoid biosynthetic process GO:0010224|response to UV-B	GO:0004672|protein kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_01492	A	A1S	Potri.001G050700	Potri.001G050700(AS)	POPTR_0001s14410	sp|Q55680|Y005_SYNY3	Uncharacterized protein sll0005 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0005 PE=3 SV=1	AT3G24190.1	| Symbols: | Protein kinase superfamily protein | chr3:8743319-8747703 FORWARD LENGTH=793	LOC_Os02g57160.1	protein| ELMO/CED-12 family protein, putative, expressed	IMGA|contig_75251_1.1	Possible protein kinase ABC1 family protein contig_75251 433-1707 E PREDN 20111014	GO:0006468|protein phosphorylation GO:0009744|response to sucrose stimulus GO:0009813|flavonoid biosynthetic process GO:0010224|response to UV-B	GO:0004672|protein kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_01493	A	A2S	Potri.001G050600	Potri.001G050600(AS) Potri.003G177600(DS)	POPTR_0001s14420	NA	NA	AT1G04770.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:1336564-1337767 REVERSE LENGTH=303	LOC_Os05g43040.1	protein|tetratricopeptide repeat domain containing protein, expressed	NA	NA	GO:0009658|chloroplast organization	NA	NA
pt2_01494	A	A1S	Potri.001G050400	Potri.001G050400(AS)	POPTR_0001s14430	sp|P47192|VA722_ARATH	Vesicle-associated membrane protein 722 OS=Arabidopsis thaliana GN=VAMP722 PE=2 SV=2	AT2G33120.1	| Symbols: SAR1, VAMP722, ATVAMP722 | synaptobrevin-related protein 1 | chr2:14043785-14045337 REVERSE LENGTH=221	LOC_Os07g09600.1	protein|vesicle-associated membrane protein, putative, expressed	IMGA|Medtr5g089370.1	Vesicle-associated membrane protein 7C chr5 37805654-37809372 F EGN_Mt100125 20111014	GO:0006810|transport GO:0016192|vesicle-mediated transport GO:0048451|petal formation GO:0048453|sepal formation	GO:0003674|molecular_function	GO:0005768|endosome GO:0005886|plasma membrane GO:0009507|chloroplast GO:0016020|membrane GO:0016021|integral to membrane
pt2_01495	A	A1S	Potri.001G050500	Potri.001G050500(AS)	POPTR_0001s14440	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01496	R	R	NA	NA	POPTR_0001s14450	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01497	A	A1S	Potri.001G050200	Potri.001G050200(AS)	POPTR_0001s14460	sp|O49323|CSLD1_ARATH	Cellulose synthase-like protein D1 OS=Arabidopsis thaliana GN=CSLD1 PE=2 SV=1	AT2G33100.1	| Symbols: ATCSLD1, CSLD1 | cellulose synthase-like D1 | chr2:14036494-14040044 REVERSE LENGTH=1036	LOC_Os06g22980.1	protein|CSLD5 - cellulose synthase-like family D, expressed	IMGA|Medtr5g029190.1	Cellulose synthase-like protein chr5 11949044-11944517 E EGN_Mt100125 20111014	GO:0000271|polysaccharide biosynthetic process GO:0009846|pollen germination GO:0030244|cellulose biosynthetic process	GO:0016757|transferase activity, transferring glycosyl groups GO:0016759|cellulose synthase activity GO:0016760|cellulose synthase (UDP-forming) activity	GO:0005794|Golgi apparatus GO:0016020|membrane
pt2_01498	A	A1S	Potri.001G050100	Potri.001G050100(AS)	POPTR_0001s14470	sp|Q9ZVQ6|P2B10_ARATH	F-box protein PP2-B10 OS=Arabidopsis thaliana GN=PP2B10 PE=1 SV=1	AT2G02360.1	| Symbols: AtPP2-B10, PP2-B10 | phloem protein 2-B10 | chr2:619699-620736 REVERSE LENGTH=272	LOC_Os12g03740.1	protein|OsFBX438 - F-box domain containing protein, expressed	IMGA|Medtr1g079370.1	F-box protein PP2-B1 chr1 19775736-19772948 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0030246|carbohydrate binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01499	A	A1S	Potri.001G050100	Potri.001G050100(AS)	POPTR_0001s14470	sp|Q9ZVQ6|P2B10_ARATH	F-box protein PP2-B10 OS=Arabidopsis thaliana GN=PP2B10 PE=1 SV=1	AT2G02360.1	| Symbols: AtPP2-B10, PP2-B10 | phloem protein 2-B10 | chr2:619699-620736 REVERSE LENGTH=272	LOC_Os12g03740.1	protein|OsFBX438 - F-box domain containing protein, expressed	IMGA|Medtr1g079370.1	F-box protein PP2-B1 chr1 19775736-19772948 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0030246|carbohydrate binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01500	A	A1S	Potri.001G050100	Potri.001G050100(AS)	POPTR_0001s14470	sp|Q9ZVQ6|P2B10_ARATH	F-box protein PP2-B10 OS=Arabidopsis thaliana GN=PP2B10 PE=1 SV=1	AT2G02360.1	| Symbols: AtPP2-B10, PP2-B10 | phloem protein 2-B10 | chr2:619699-620736 REVERSE LENGTH=272	LOC_Os12g03740.1	protein|OsFBX438 - F-box domain containing protein, expressed	IMGA|Medtr1g079370.1	F-box protein PP2-B1 chr1 19775736-19772948 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0030246|carbohydrate binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01501	A	A1S	Potri.001G050000	Potri.001G050000(AS)	POPTR_0001s14480	sp|Q43621|GSHRC_PEA	Glutathione reductase, cytosolic OS=Pisum sativum PE=2 SV=1	AT3G24170.3	| Symbols: ATGR1, GR1 | glutathione-disulfide reductase | chr3:8729762-8734115 REVERSE LENGTH=499	LOC_Os02g56850.2	protein|glutathione reductase, putative, expressed	IMGA|contig_12681_1.1	Glutathione reductase contig_12681 1554-468 H PREDN 20111014	GO:0006749|glutathione metabolic process GO:0009407|toxin catabolic process GO:0045454|cell redox homeostasis GO:0055114|oxidation-reduction process	GO:0004362|glutathione-disulfide reductase activity GO:0009055|electron carrier activity GO:0016491|oxidoreductase activity GO:0016668|oxidoreductase activity, acting on a sulfur group of donors, NAD or NADP as acceptor GO:0050660|flavin adenine dinucleotide binding GO:0050661|NADP binding	GO:0005737|cytoplasm GO:0005777|peroxisome
pt2_01502	A	A2S	Potri.001G049900	Potri.001G049900(AS) Potri.001G050000(AA)	POPTR_0001s14490	NA	NA	AT4G13670.1	| Symbols: PTAC5 | plastid transcriptionally active 5 | chr4:7948644-7950779 FORWARD LENGTH=387	LOC_Os04g43420.1	protein|PTAC5, putative, expressed	NA	NA	GO:0008152|metabolic process	GO:0031072|heat shock protein binding GO:0051082|unfolded protein binding	GO:0009295|nucleoid GO:0009507|chloroplast GO:0009508|plastid chromosome GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009941|chloroplast envelope
pt2_01503	A	A1S	Potri.001G049800	Potri.001G049800(AS)	POPTR_0001s14500	NA	NA	AT3G24160.1	| Symbols: PMP | putative type 1 membrane protein | chr3:8726241-8729023 FORWARD LENGTH=364	LOC_Os08g45220.2	protein|expressed protein	NA	NA	GO:0000902|cell morphogenesis GO:0006623|protein targeting to vacuole GO:0006816|calcium ion transport GO:0007030|Golgi organization GO:0007033|vacuole organization GO:0008150|biological_process GO:0009651|response to salt stress GO:0016049|cell growth GO:0048193|Golgi vesicle transport	GO:0003674|molecular_function	GO:0005774|vacuolar membrane GO:0005783|endoplasmic reticulum GO:0005794|Golgi apparatus GO:0016020|membrane
pt2_01504	A	A1S	Potri.001G049700	Potri.001G049700(AS)	POPTR_0001s14510	NA	NA	NA	NA	NA	NA	NA	NA	GO:0010067|procambium histogenesis GO:0010087|phloem or xylem histogenesis GO:0010089|xylem development GO:0090506|axillary shoot meristem initiation	GO:0003674|molecular_function GO:0033612|receptor serine/threonine kinase binding	GO:0005739|mitochondrion GO:0048046|apoplast
pt2_01505	A	A1S	Potri.001G049600	Potri.001G049600(AS)	POPTR_0001s14520	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01506	B	B1S	Potri.017G044300	Potri.017G044300(BS)	POPTR_0001s14540	NA	NA	NA	NA	NA	NA	IMGA|contig_57373_1.1	Unknown protein contig_57373 97-3656 H PREDN 20111014	NA	NA	NA
pt2_01507	G	G1	NA	NA	POPTR_0001s14550	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01508	A	A1S	Potri.001G049400	Potri.001G049400(AS)	POPTR_0001s14560	sp|Q9FUY2|LEUNG_ARATH	Transcriptional corepressor LEUNIG OS=Arabidopsis thaliana GN=LUG PE=1 SV=2	AT2G32700.6	| Symbols: LUH | LEUNIG_homolog | chr2:13867235-13871844 FORWARD LENGTH=785	LOC_Os02g56880.1	protein|transcriptional corepressor LEUNIG, putative, expressed	IMGA|Medtr1g011610.1	Transcriptional corepressor LEUNIG chr1 2436342-2425793 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009790|embryo development GO:0009827|plant-type cell wall modification GO:0009908|flower development GO:0045892|negative regulation of transcription, DNA-dependent GO:0048358|mucilage pectin biosynthetic process	GO:0003713|transcription coactivator activity	GO:0005634|nucleus
pt2_01509	C	C1A	Potri.001G049400	Potri.001G049400(CA)	sp|Q9FUY2|LEUNG_ARATH	Transcriptional corepressor LEUNIG OS=Arabidopsis thaliana GN=LUG PE=1 SV=2	AT2G32700.6	| Symbols: LUH | LEUNIG_homolog | chr2:13867235-13871844 FORWARD LENGTH=785	LOC_Os02g56880.1	protein|transcriptional corepressor LEUNIG, putative, expressed	IMGA|Medtr1g011610.1	Transcriptional corepressor LEUNIG chr1 2436342-2425793 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009790|embryo development GO:0009827|plant-type cell wall modification GO:0009908|flower development GO:0045892|negative regulation of transcription, DNA-dependent GO:0048358|mucilage pectin biosynthetic process	GO:0003713|transcription coactivator activity	GO:0005634|nucleus
pt2_01510	A	A2S	Potri.001G049300	Potri.001G049300(AS) Potri.003G178700(DS)	POPTR_0001s14590	sp|Q8LBL5|PRT1_ARATH	E3 ubiquitin-protein ligase PRT1 OS=Arabidopsis thaliana GN=PRT1 PE=2 SV=2	AT3G24800.1	| Symbols: PRT1 | proteolysis 1 | chr3:9055653-9057795 FORWARD LENGTH=410	LOC_Os02g40810.1	protein|Zinc finger, ZZ type domain containing protein, expressed	NA	NA	GO:0006511|ubiquitin-dependent protein catabolic process	GO:0004842|ubiquitin-protein ligase activity GO:0008270|zinc ion binding	GO:0000151|ubiquitin ligase complex GO:0005737|cytoplasm
pt2_01511	A	A2S	Potri.001G049200	Potri.001G049200(AS) Potri.001G049100(AS)	POPTR_0001s14600	sp|A8CDT3|LUPS_BRUGY	Lupeol synthase OS=Bruguiera gymnorhiza GN=LUS PE=1 SV=1	AT1G78950.1	| Symbols: | Terpenoid cyclases family protein | chr1:29684558-29688673 REVERSE LENGTH=759	LOC_Os02g04710.1	protein|cycloartenol synthase, putative, expressed	IMGA|Medtr5g008810.1	Cycloartenol synthase chr5 1706879-1695440 E EGN_Mt100125 20111014	GO:0016126|sterol biosynthetic process GO:0019745|pentacyclic triterpenoid biosynthetic process	GO:0003824|catalytic activity GO:0016866|intramolecular transferase activity GO:0042300|beta-amyrin synthase activity GO:0090438|camelliol C synthase activity	GO:0005634|nucleus
pt2_01512	A	A1S	Potri.001G049200	Potri.001G049200(AS)	POPTR_0001s14610	sp|A8CDT3|LUPS_BRUGY	Lupeol synthase OS=Bruguiera gymnorhiza GN=LUS PE=1 SV=1	AT1G78950.1	| Symbols: | Terpenoid cyclases family protein | chr1:29684558-29688673 REVERSE LENGTH=759	LOC_Os02g04710.1	protein|cycloartenol synthase, putative, expressed	IMGA|Medtr5g008810.1	Cycloartenol synthase chr5 1706879-1695440 E EGN_Mt100125 20111014	GO:0016126|sterol biosynthetic process GO:0019745|pentacyclic triterpenoid biosynthetic process	GO:0003824|catalytic activity GO:0016866|intramolecular transferase activity GO:0042300|beta-amyrin synthase activity GO:0090438|camelliol C synthase activity	GO:0005634|nucleus
pt2_01513	A	A1S	Potri.001G049200	Potri.001G049200(AS)	POPTR_0001s14610	sp|A8CDT3|LUPS_BRUGY	Lupeol synthase OS=Bruguiera gymnorhiza GN=LUS PE=1 SV=1	AT1G78950.1	| Symbols: | Terpenoid cyclases family protein | chr1:29684558-29688673 REVERSE LENGTH=759	LOC_Os02g04710.1	protein|cycloartenol synthase, putative, expressed	IMGA|Medtr5g008810.1	Cycloartenol synthase chr5 1706879-1695440 E EGN_Mt100125 20111014	GO:0016126|sterol biosynthetic process GO:0019745|pentacyclic triterpenoid biosynthetic process	GO:0003824|catalytic activity GO:0016866|intramolecular transferase activity GO:0042300|beta-amyrin synthase activity GO:0090438|camelliol C synthase activity	GO:0005634|nucleus
pt2_01514	A	A2S	Potri.001G049200	Potri.001G049200(AS) Potri.001G049100(AS)	POPTR_0001s14610	sp|A8CDT3|LUPS_BRUGY	Lupeol synthase OS=Bruguiera gymnorhiza GN=LUS PE=1 SV=1	AT1G78950.1	| Symbols: | Terpenoid cyclases family protein | chr1:29684558-29688673 REVERSE LENGTH=759	LOC_Os02g04710.1	protein|cycloartenol synthase, putative, expressed	IMGA|Medtr5g008810.1	Cycloartenol synthase chr5 1706879-1695440 E EGN_Mt100125 20111014	GO:0016126|sterol biosynthetic process GO:0019745|pentacyclic triterpenoid biosynthetic process	GO:0003824|catalytic activity GO:0016866|intramolecular transferase activity GO:0042300|beta-amyrin synthase activity GO:0090438|camelliol C synthase activity	GO:0005634|nucleus
pt2_01515	A	A1S	Potri.001G049000	Potri.001G049000(AS)	POPTR_0001s14620	sp|Q76CU2|PDR1_TOBAC	Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum GN=PDR1 PE=2 SV=1	AT1G15520.1	| Symbols: PDR12, ATPDR12, ABCG40, ATABCG40 | pleiotropic drug resistance 12 | chr1:5331993-5338175 REVERSE LENGTH=1423	LOC_Os02g11760.1	protein|pleiotropic drug resistance protein, putative, expressed	IMGA|Medtr5g070320.1	Pleiotropic drug resistance ABC transporter family protein chr5 28781263-28793818 H EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0002831|regulation of response to biotic stimulus GO:0006612|protein targeting to membrane GO:0006855|drug transmembrane transport GO:0007165|signal transduction GO:0009414|response to water deprivation GO:0009595|detection of biotic stimulus GO:0009607|response to biotic stimulus GO:0009697|salicylic acid biosynthetic process GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009751|response to salicylic acid stimulus GO:0009753|response to jasmonic acid stimulus GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010193|response to ozone GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0015692|lead ion transport GO:0031348|negative regulation of defense response GO:0042538|hyperosmotic salinity response GO:0042742|defense response to bacterium GO:0043069|negative regulation of programmed cell death GO:0043900|regulation of multi-organism process GO:0046865|terpenoid transport GO:0050832|defense response to fungus GO:0080168|abscisic acid transport	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0005886|plasma membrane
pt2_01516	A	A1S	Potri.001G048900	Potri.001G048900(AS)	POPTR_0001s14630	sp|Q76CU2|PDR1_TOBAC	Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum GN=PDR1 PE=2 SV=1	AT1G15520.1	| Symbols: PDR12, ATPDR12, ABCG40, ATABCG40 | pleiotropic drug resistance 12 | chr1:5331993-5338175 REVERSE LENGTH=1423	LOC_Os02g11760.1	protein|pleiotropic drug resistance protein, putative, expressed	IMGA|Medtr5g070320.1	Pleiotropic drug resistance ABC transporter family protein chr5 28781263-28793818 H EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0002831|regulation of response to biotic stimulus GO:0006612|protein targeting to membrane GO:0006855|drug transmembrane transport GO:0007165|signal transduction GO:0009414|response to water deprivation GO:0009595|detection of biotic stimulus GO:0009607|response to biotic stimulus GO:0009697|salicylic acid biosynthetic process GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009751|response to salicylic acid stimulus GO:0009753|response to jasmonic acid stimulus GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010193|response to ozone GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0015692|lead ion transport GO:0031348|negative regulation of defense response GO:0042538|hyperosmotic salinity response GO:0042742|defense response to bacterium GO:0043069|negative regulation of programmed cell death GO:0043900|regulation of multi-organism process GO:0046865|terpenoid transport GO:0050832|defense response to fungus GO:0080168|abscisic acid transport	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0005886|plasma membrane
pt2_01517	R	R	NA	NA	POPTR_0001s14640	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01518	A	A2S	Potri.001G048800	Potri.001G048800(AS) Potri.001G048700(BS)	POPTR_0001s14650	sp|Q76CU2|PDR1_TOBAC	Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum GN=PDR1 PE=2 SV=1	AT1G15520.1	| Symbols: PDR12, ATPDR12, ABCG40, ATABCG40 | pleiotropic drug resistance 12 | chr1:5331993-5338175 REVERSE LENGTH=1423	LOC_Os02g11760.1	protein|pleiotropic drug resistance protein, putative, expressed	IMGA|Medtr5g070320.1	Pleiotropic drug resistance ABC transporter family protein chr5 28781263-28793818 H EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0002831|regulation of response to biotic stimulus GO:0006612|protein targeting to membrane GO:0006855|drug transmembrane transport GO:0007165|signal transduction GO:0009414|response to water deprivation GO:0009595|detection of biotic stimulus GO:0009607|response to biotic stimulus GO:0009697|salicylic acid biosynthetic process GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009751|response to salicylic acid stimulus GO:0009753|response to jasmonic acid stimulus GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010193|response to ozone GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0015692|lead ion transport GO:0031348|negative regulation of defense response GO:0042538|hyperosmotic salinity response GO:0042742|defense response to bacterium GO:0043069|negative regulation of programmed cell death GO:0043900|regulation of multi-organism process GO:0046865|terpenoid transport GO:0050832|defense response to fungus GO:0080168|abscisic acid transport	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0005886|plasma membrane
pt2_01519	C	C1S	Potri.004G177400	Potri.004G177400(CS)	sp|P80093|PDS_CAPAN	15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Capsicum annuum GN=PDS PE=1 SV=1	AT4G14210.1	| Symbols: PDS3, PDS, PDE226 | phytoene desaturase 3 | chr4:8190426-8194769 REVERSE LENGTH=566	LOC_Os04g47290.2	protein|amine oxidase, putative, expressed	NA	NA	GO:0010155|regulation of proton transport GO:0016117|carotenoid biosynthetic process GO:0016120|carotene biosynthetic process GO:0046777|protein autophosphorylation GO:0055114|oxidation-reduction process	GO:0016166|phytoene dehydrogenase activity GO:0016491|oxidoreductase activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009536|plastid GO:0009941|chloroplast envelope
pt2_01520	A	A3S	Potri.001G048700	Potri.001G048700(AS) Potri.001G048800(DS) Potri.001G049000(DS)	POPTR_0001s14660	sp|Q76CU2|PDR1_TOBAC	Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum GN=PDR1 PE=2 SV=1	AT1G15520.1	| Symbols: PDR12, ATPDR12, ABCG40, ATABCG40 | pleiotropic drug resistance 12 | chr1:5331993-5338175 REVERSE LENGTH=1423	LOC_Os02g11760.1	protein|pleiotropic drug resistance protein, putative, expressed	IMGA|Medtr5g070320.1	Pleiotropic drug resistance ABC transporter family protein chr5 28781263-28793818 H EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0002831|regulation of response to biotic stimulus GO:0006612|protein targeting to membrane GO:0006855|drug transmembrane transport GO:0007165|signal transduction GO:0009414|response to water deprivation GO:0009595|detection of biotic stimulus GO:0009607|response to biotic stimulus GO:0009697|salicylic acid biosynthetic process GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009751|response to salicylic acid stimulus GO:0009753|response to jasmonic acid stimulus GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010193|response to ozone GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0015692|lead ion transport GO:0031348|negative regulation of defense response GO:0042538|hyperosmotic salinity response GO:0042742|defense response to bacterium GO:0043069|negative regulation of programmed cell death GO:0043900|regulation of multi-organism process GO:0046865|terpenoid transport GO:0050832|defense response to fungus GO:0080168|abscisic acid transport	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0005886|plasma membrane
pt2_01521	G	G1	NA	NA	POPTR_0001s14670	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01522	A	A2S	Potri.001G048500	Potri.001G048500(AS) Potri.003G179500(DS)	POPTR_0001s14680	sp|Q0V7T5|Y1864_ARATH	Probable receptor-like protein kinase At1g80640 OS=Arabidopsis thaliana GN=At1g80640 PE=2 SV=1	AT2G25220.1	| Symbols: | Protein kinase superfamily protein | chr2:10742918-10745540 REVERSE LENGTH=414	LOC_Os02g08530.1	protein|protein kinase family protein, putative, expressed	IMGA|Medtr5g092120.1	Serine/threonine protein kinase chr5 39187993-39185584 F EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_01523	A	A1S	Potri.001G048400	Potri.001G048400(AS)	POPTR_0001s14690	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01524	A	A3S	Potri.001G048300	Potri.001G048300(AS) Potri.005G189200(DS) Potri.003G179800(DS)	POPTR_0001s14700	sp|Q42556|PMA9_ARATH	ATPase 9, plasma membrane-type OS=Arabidopsis thaliana GN=AHA9 PE=2 SV=2	AT1G80660.1	| Symbols: AHA9, HA9 | H(+)-ATPase 9 | chr1:30316227-30319948 REVERSE LENGTH=954	LOC_Os04g56160.1	protein|plasma membrane ATPase, putative, expressed	IMGA|contig_93597_1.1	H-ATPase contig_93597 548-3166 H PREDN 20111014	GO:0006200|ATP catabolic process GO:0006754|ATP biosynthetic process GO:0006812|cation transport GO:0008152|metabolic process GO:0015992|proton transport	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0005524|ATP binding GO:0008553|hydrogen-exporting ATPase activity, phosphorylative mechanism GO:0015662|ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism GO:0016887|ATPase activity GO:0046872|metal ion binding	GO:0005774|vacuolar membrane GO:0005886|plasma membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_01525	G	G7	NA	NA	POPTR_0001s14710	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01526	A	A2S	Potri.001G048200	Potri.001G048200(AS) Potri.003G179900(DS)	POPTR_0001s14720	sp|Q94AW5|ERF03_ARATH	Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana GN=ERF003 PE=2 SV=1	AT5G25190.1	| Symbols: | Integrase-type DNA-binding superfamily protein | chr5:8707007-8707655 REVERSE LENGTH=181	LOC_Os02g55380.1	protein|AP2 domain containing protein, expressed	IMGA|Medtr5g062700.1	Ethylene-responsive transcription factor RAP2-4 chr5 25273709-25276211 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009740|gibberellic acid mediated signaling pathway GO:0009873|ethylene mediated signaling pathway GO:0010162|seed dormancy process	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_01527	A	A1S	Potri.001G048100	Potri.001G048100(AS)	POPTR_0001s14730	sp|Q38942|RAE1L_ARATH	Rae1-like protein At1g80670 OS=Arabidopsis thaliana GN=At1g80670 PE=2 SV=2	AT1G80670.1	| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr1:30320809-30323543 REVERSE LENGTH=349	LOC_Os08g07960.1	protein|mitotic checkpoint protein, putative, expressed	IMGA|Medtr5g005120.1	Mitotic checkpoint protein BUB3 chr5 55763-58997 F EGN_Mt100125 20111014	NA	GO:0000166|nucleotide binding GO:0005515|protein binding	GO:0005635|nuclear envelope GO:0005737|cytoplasm GO:0005829|cytosol GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_01528	A	A1S	Potri.001G048100	Potri.001G048100(AS)	POPTR_0001s14730	sp|Q38942|RAE1L_ARATH	Rae1-like protein At1g80670 OS=Arabidopsis thaliana GN=At1g80670 PE=2 SV=2	AT1G80670.1	| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr1:30320809-30323543 REVERSE LENGTH=349	LOC_Os08g07960.1	protein|mitotic checkpoint protein, putative, expressed	IMGA|Medtr5g005120.1	Mitotic checkpoint protein BUB3 chr5 55763-58997 F EGN_Mt100125 20111014	NA	GO:0000166|nucleotide binding GO:0005515|protein binding	GO:0005635|nuclear envelope GO:0005737|cytoplasm GO:0005829|cytosol GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_01529	A	A1S	Potri.001G047900	Potri.001G047900(AS)	POPTR_0001s14740	sp|Q92564|DCNL4_HUMAN	DCN1-like protein 4 OS=Homo sapiens GN=DCUN1D4 PE=1 SV=2	AT1G15860.2	| Symbols: | Domain of unknown function (DUF298) | chr1:5455055-5456741 FORWARD LENGTH=227	LOC_Os08g34070.2	protein|DCN1, putative, expressed	NA	NA	GO:0008150|biological_process	NA	GO:0005634|nucleus
pt2_01530	A	A1S	Potri.001G047900	Potri.001G047900(AS)	POPTR_0001s14740	sp|Q92564|DCNL4_HUMAN	DCN1-like protein 4 OS=Homo sapiens GN=DCUN1D4 PE=1 SV=2	AT1G15860.2	| Symbols: | Domain of unknown function (DUF298) | chr1:5455055-5456741 FORWARD LENGTH=227	LOC_Os08g34070.2	protein|DCN1, putative, expressed	NA	NA	GO:0008150|biological_process	NA	GO:0005634|nucleus
pt2_01531	A	A1S	Potri.001G047800	Potri.001G047800(AS)	POPTR_0001s14750	sp|Q93VG8|PPDEX_ARATH	DeSI-like protein At4g17486 OS=Arabidopsis thaliana GN=At4g17486 PE=2 SV=1	AT1G80690.1	| Symbols: | PPPDE putative thiol peptidase family protein | chr1:30329283-30330524 REVERSE LENGTH=227	LOC_Os03g10200.1	protein|ethylene-responsive element-binding protein, putative, expressed	IMGA|Medtr5g013040.1	hypothetical protein chr5 3837813-3834899 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_01532	A	A2S	Potri.001G047700	Potri.001G047700(AS) Potri.003G180500(DS)	POPTR_0001s14760	NA	NA	AT1G80980.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80700.1); Has 477 Blast hits to 341 proteins in 85 species: Archae - 2; Bacteria - 44; Metazoa - 78; Fungi - 37; Plants - 42; Viruses - 0; Other Eukaryotes - 274 (source: NCBI BLink). | chr1:30422184-30423440 REVERSE LENGTH=214	LOC_Os08g17610.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_01533	A	A1S	Potri.001G047600	Potri.001G047600(AS)	POPTR_0001s14770	sp|Q8W487|YB95_ARATH	Uncharacterized protein At2g39795, mitochondrial OS=Arabidopsis thaliana GN=At2g39795 PE=1 SV=1	AT1G15870.1	| Symbols: | Mitochondrial glycoprotein family protein | chr1:5457153-5458245 FORWARD LENGTH=242	LOC_Os08g34130.1	protein|mitochondrial glycoprotein, putative, expressed	IMGA|Medtr5g080880.1	hypothetical protein chr5 33627725-33632668 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0005759|mitochondrial matrix
pt2_01534	A	A2S	Potri.001G047500	Potri.001G047500(AS) Potri.003G180600(DS)	POPTR_0001s14780	sp|Q39262|ZFP3_ARATH	Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1	AT5G10970.1	| Symbols: | C2H2 and C2HC zinc fingers superfamily protein | chr5:3469268-3470086 FORWARD LENGTH=272	LOC_Os03g13600.2	protein|ZOS3-07 - C2H2 zinc finger protein, expressed	IMGA|Medtr5g077370.1	Zinc finger protein chr5 32033659-32032815 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003676|nucleic acid binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_01535	A	A2S	Potri.001G047400	Potri.001G047400(AS) Potri.003G180700(BS)	POPTR_0001s14790	sp|Q9SAI5|RL71_ARATH	60S ribosomal protein L7-1 OS=Arabidopsis thaliana GN=RPL7A PE=2 SV=1	AT1G80750.1	| Symbols: | Ribosomal protein L30/L7 family protein | chr1:30349052-30350434 FORWARD LENGTH=247	LOC_Os08g42920.1	protein|60S ribosomal protein L7, putative, expressed	IMGA|contig_48786_1.1	60S ribosomal protein L7 contig_48786 1134-1768 F PREDN 20111014	GO:0001510|RNA methylation GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005730|nucleolus GO:0005737|cytoplasm GO:0005829|cytosol GO:0005840|ribosome GO:0015934|large ribosomal subunit GO:0022625|cytosolic large ribosomal subunit
pt2_01536	R	R	NA	NA	POPTR_0001s14800	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01537	A	A1S	Potri.001G047200	Potri.001G047200(AS)	POPTR_0001s14810	sp|Q9SGQ6|PP126_ARATH	Pentatricopeptide repeat-containing protein At1g76280 OS=Arabidopsis thaliana GN=At1g76280 PE=2 SV=2	AT1G76280.3	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:28617948-28622581 REVERSE LENGTH=801	LOC_Os09g29790.1	protein|PPR repeat domain containing protein, putative, expressed	IMGA|Medtr5g031740.1	Pentatricopeptide repeat-containing protein chr5 13189186-13191870 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_01538	A	A1S	Potri.001G047100	Potri.001G047100(AS)	POPTR_0001s14820	sp|Q9LMP7|GOS11_ARATH	Golgi SNAP receptor complex member 1-1 OS=Arabidopsis thaliana GN=GOS11 PE=2 SV=1	AT1G15880.1	| Symbols: GOS11, atgos11 | golgi snare 11 | chr1:5458718-5460089 REVERSE LENGTH=223	LOC_Os08g34140.1	protein|vesicle transport v-SNARE protein, putative, expressed	NA	NA	GO:0006869|lipid transport GO:0006888|ER to Golgi vesicle-mediated transport GO:0006891|intra-Golgi vesicle-mediated transport GO:0006944|cellular membrane fusion GO:0010351|lithium ion transport GO:0016558|protein import into peroxisome matrix GO:0048193|Golgi vesicle transport	GO:0000149|SNARE binding	GO:0005622|intracellular GO:0005794|Golgi apparatus GO:0016021|integral to membrane
pt2_01539	A	A1S	Potri.001G047000	Potri.001G047000(AS)	POPTR_0001s14830	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01540	A	A1S	Potri.001G046900	Potri.001G046900(AS)	POPTR_0001s14840	NA	NA	AT1G15900.1	| Symbols: | unknown protein; Has 19 Blast hits to 19 proteins in 10 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr1:5464356-5464697 FORWARD LENGTH=113	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_01541	B	B2S	Potri.001G046800	Potri.001G046800(BS) Potri.001G046900(BA)	POPTR_0001s14850	sp|Q9SAI4|NIP61_ARATH	Aquaporin NIP6-1 OS=Arabidopsis thaliana GN=NIP6-1 PE=1 SV=1	AT1G80760.1	| Symbols: NIP6;1, NIP6, NLM7 | NOD26-like intrinsic protein 6;1 | chr1:30350640-30352015 REVERSE LENGTH=305	LOC_Os10g36924.1	protein|aquaporin protein, putative, expressed	IMGA|Medtr1g097840.1	Aquaporin NIP3-1 chr1 27981067-27985566 E EGN_Mt100125 20111014	GO:0006810|transport GO:0010264|myo-inositol hexakisphosphate biosynthetic process GO:0046713|borate transport GO:0080029|cellular response to boron-containing substance levels	GO:0005215|transporter activity GO:0015168|glycerol transmembrane transporter activity GO:0015204|urea transmembrane transporter activity GO:0015250|water channel activity GO:0046715|borate transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_01542	A	A1S	Potri.001G046700	Potri.001G046700(AS)	POPTR_0001s14860	sp|Q9SKZ2|CAF1G_ARATH	Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana GN=CAF1-7 PE=2 SV=2	AT2G32070.1	| Symbols: | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr2:13640829-13641656 REVERSE LENGTH=275	LOC_Os02g55300.1	protein|CAF1 family ribonuclease containing protein, putative, expressed	IMGA|Medtr5g043120.1	CCR4-associated factor chr5 18534846-18533998 H EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0009451|RNA modification	GO:0003676|nucleic acid binding GO:0004540|ribonuclease activity	GO:0005634|nucleus
pt2_01543	A	A1S	Potri.001G046600	Potri.001G046600(AS)	POPTR_0001s14870	sp|Q9XHS0|RS12_HORVU	40S ribosomal protein S12 OS=Hordeum vulgare GN=RPS12 PE=2 SV=1	AT2G32060.2	| Symbols: | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | chr2:13639228-13640104 REVERSE LENGTH=144	LOC_Os07g05580.1	protein|ribosomal protein L7Ae, putative, expressed	IMGA|Medtr5g012890.1	40S ribosomal protein S12 chr5 3720346-3721879 F EGN_Mt100125 20111014	GO:0001510|RNA methylation GO:0006412|translation GO:0009853|photorespiration	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005634|nucleus GO:0005840|ribosome GO:0022626|cytosolic ribosome GO:0022627|cytosolic small ribosomal subunit
pt2_01544	A	A1S	Potri.001G046500	Potri.001G046500(AS)	POPTR_0001s14880	NA	NA	AT4G31880.2	| Symbols: | LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT1G15940.1). | chr4:15419435-15423939 REVERSE LENGTH=872	LOC_Os04g42320.1	protein|AT hook motif family protein, expressed	NA	NA	GO:0006312|mitotic recombination GO:0007062|sister chromatid cohesion GO:0009560|embryo sac egg cell differentiation GO:0009630|gravitropism GO:0031048|chromatin silencing by small RNA GO:0045132|meiotic chromosome segregation	NA	GO:0005634|nucleus GO:0005829|cytosol GO:0009507|chloroplast
pt2_01545	A	A5S	Potri.001G046400	Potri.001G046400(AS) Potri.001G046100(BS) Potri.003G181400(DS) Potri.001G045000(DS) Potri.001G045100(DS)	POPTR_0001s14890	sp|Q9S9N9|CCR1_ARATH	Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1	AT1G15950.1	| Symbols: CCR1, IRX4, ATCCR1 | cinnamoyl coa reductase 1 | chr1:5478855-5481915 FORWARD LENGTH=344	LOC_Os08g34280.1	protein|cinnamoyl-CoA reductase, putative, expressed	IMGA|Medtr5g072620.1	Dihydroflavonol 4-reductase-like protein chr5 29922618-29926018 E EGN_Mt100125 20111014	GO:0006623|protein targeting to vacuole GO:0009409|response to cold GO:0009809|lignin biosynthetic process GO:0010200|response to chitin GO:0044237|cellular metabolic process GO:0050832|defense response to fungus	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0016621|cinnamoyl-CoA reductase activity GO:0050662|coenzyme binding	GO:0005575|cellular_component GO:0005737|cytoplasm GO:0005829|cytosol
pt2_01546	C	C1S	Potri.001G046300	Potri.001G046300(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01547	A	A4S	Potri.001G046100	Potri.001G046100(AS) Potri.001G046400(BS) Potri.001G045000(DS) Potri.001G045100(DS)	POPTR_0001s14910	sp|Q9S9N9|CCR1_ARATH	Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1	AT1G15950.1	| Symbols: CCR1, IRX4, ATCCR1 | cinnamoyl coa reductase 1 | chr1:5478855-5481915 FORWARD LENGTH=344	LOC_Os08g34280.1	protein|cinnamoyl-CoA reductase, putative, expressed	IMGA|Medtr5g072620.1	Dihydroflavonol 4-reductase-like protein chr5 29922618-29926018 E EGN_Mt100125 20111014	GO:0006623|protein targeting to vacuole GO:0009409|response to cold GO:0009809|lignin biosynthetic process GO:0044237|cellular metabolic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0016621|cinnamoyl-CoA reductase activity GO:0050662|coenzyme binding	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_01548	A	A1S	Potri.001G046000	Potri.001G046000(AS)	POPTR_0001s14920	sp|Q9SD53|Y3720_ARATH	UPF0481 protein At3g47200 OS=Arabidopsis thaliana GN=At3g47200 PE=1 SV=1	AT3G50160.1	| Symbols: | Plant protein of unknown function (DUF247) | chr3:18598826-18600903 REVERSE LENGTH=503	LOC_Os01g21650.1	protein|plant protein of unknown function domain containing protein, expressed	IMGA|Medtr5g016570.1	hypothetical protein chr5 5698968-5697224 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005886|plasma membrane
pt2_01549	B	B1S	Potri.001G045500	Potri.001G045500(BS)	POPTR_0001s14930	sp|Q9S9N9|CCR1_ARATH	Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1	AT1G15950.1	| Symbols: CCR1, IRX4, ATCCR1 | cinnamoyl coa reductase 1 | chr1:5478855-5481915 FORWARD LENGTH=344	LOC_Os08g34280.1	protein|cinnamoyl-CoA reductase, putative, expressed	IMGA|Medtr5g072620.1	Dihydroflavonol 4-reductase-like protein chr5 29922618-29926018 E EGN_Mt100125 20111014	GO:0006623|protein targeting to vacuole GO:0009409|response to cold GO:0009809|lignin biosynthetic process GO:0044237|cellular metabolic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0016621|cinnamoyl-CoA reductase activity GO:0050662|coenzyme binding	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_01550	C	C4S	Potri.001G045800	Potri.001G045800(CS) Potri.001G045700(CS) Potri.001G045600(CS) Potri.001G045800(CS)	sp|Q9S9N9|CCR1_ARATH	Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1	AT1G15950.1	| Symbols: CCR1, IRX4, ATCCR1 | cinnamoyl coa reductase 1 | chr1:5478855-5481915 FORWARD LENGTH=344	LOC_Os09g25150.2	protein|cinnamoyl-CoA reductase, putative, expressed	IMGA|Medtr5g072620.1	Dihydroflavonol 4-reductase-like protein chr5 29922618-29926018 E EGN_Mt100125 20111014	GO:0006623|protein targeting to vacuole GO:0009409|response to cold GO:0009809|lignin biosynthetic process GO:0044237|cellular metabolic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0016621|cinnamoyl-CoA reductase activity GO:0050662|coenzyme binding	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_01551	C	C1S	Potri.001G045700	Potri.001G045700(CS)	sp|Q9S9N9|CCR1_ARATH	Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1	AT1G15950.1	| Symbols: CCR1, IRX4, ATCCR1 | cinnamoyl coa reductase 1 | chr1:5478855-5481915 FORWARD LENGTH=344	LOC_Os08g34280.1	protein|cinnamoyl-CoA reductase, putative, expressed	IMGA|Medtr5g072620.1	Dihydroflavonol 4-reductase-like protein chr5 29922618-29926018 E EGN_Mt100125 20111014	GO:0006623|protein targeting to vacuole GO:0009409|response to cold GO:0009809|lignin biosynthetic process GO:0044237|cellular metabolic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0016621|cinnamoyl-CoA reductase activity GO:0050662|coenzyme binding	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_01552	A	A1S	Potri.001G045500	Potri.001G045500(AS)	POPTR_0001s14970	sp|Q9S9N9|CCR1_ARATH	Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1	AT1G15950.1	| Symbols: CCR1, IRX4, ATCCR1 | cinnamoyl coa reductase 1 | chr1:5478855-5481915 FORWARD LENGTH=344	LOC_Os08g34280.1	protein|cinnamoyl-CoA reductase, putative, expressed	IMGA|Medtr5g072620.1	Dihydroflavonol 4-reductase-like protein chr5 29922618-29926018 E EGN_Mt100125 20111014	GO:0006623|protein targeting to vacuole GO:0009409|response to cold GO:0009809|lignin biosynthetic process GO:0044237|cellular metabolic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0016621|cinnamoyl-CoA reductase activity GO:0050662|coenzyme binding	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_01553	A	A1S	Potri.001G045400	Potri.001G045400(AS)	POPTR_0001s14980	sp|Q9SAH9|CCR2_ARATH	Cinnamoyl-CoA reductase 2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1	AT1G80820.1	| Symbols: CCR2, ATCCR2 | cinnamoyl coa reductase | chr1:30370646-30372460 FORWARD LENGTH=332	LOC_Os09g25150.3	protein|cinnamoyl-CoA reductase, putative, expressed	IMGA|Medtr5g072620.1	Dihydroflavonol 4-reductase-like protein chr5 29922618-29926018 E EGN_Mt100125 20111014	GO:0006623|protein targeting to vacuole GO:0009409|response to cold GO:0009809|lignin biosynthetic process GO:0044237|cellular metabolic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0016621|cinnamoyl-CoA reductase activity GO:0050662|coenzyme binding	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_01554	A	A1S	Potri.001G045300	Potri.001G045300(AS)	POPTR_0001s14990	sp|Q9S9N9|CCR1_ARATH	Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1	AT1G15950.1	| Symbols: CCR1, IRX4, ATCCR1 | cinnamoyl coa reductase 1 | chr1:5478855-5481915 FORWARD LENGTH=344	LOC_Os09g25150.2	protein|cinnamoyl-CoA reductase, putative, expressed	NA	NA	GO:0006623|protein targeting to vacuole GO:0009409|response to cold GO:0009809|lignin biosynthetic process GO:0044237|cellular metabolic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0016621|cinnamoyl-CoA reductase activity GO:0050662|coenzyme binding	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_01555	B	B1S	Potri.T134000	Potri.T134000(BS)	POPTR_0001s15000	sp|Q9M7K4|POT5_ARATH	Potassium transporter 5 OS=Arabidopsis thaliana GN=POT5 PE=1 SV=1	AT4G13420.1	| Symbols: HAK5, ATHAK5 | high affinity K+ transporter 5 | chr4:7797038-7802174 REVERSE LENGTH=785	LOC_Os01g70490.1	protein|potassium transporter, putative, expressed	IMGA|Medtr5g070670.1	Potassium transporter chr5 28933662-28942483 E EGN_Mt100125 20111014	GO:0006813|potassium ion transport GO:0071805|potassium ion transmembrane transport	GO:0009674|potassium:sodium symporter activity GO:0015079|potassium ion transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_01556	C	C2S	Potri.001G045200	Potri.001G045200(CS) Potri.T134000(CS)	sp|Q9M7K4|POT5_ARATH	Potassium transporter 5 OS=Arabidopsis thaliana GN=POT5 PE=1 SV=1	AT4G13420.1	| Symbols: HAK5, ATHAK5 | high affinity K+ transporter 5 | chr4:7797038-7802174 REVERSE LENGTH=785	LOC_Os01g70490.1	protein|potassium transporter, putative, expressed	IMGA|Medtr5g070670.1	Potassium transporter chr5 28933662-28942483 E EGN_Mt100125 20111014	GO:0006813|potassium ion transport GO:0071805|potassium ion transmembrane transport	GO:0009674|potassium:sodium symporter activity GO:0015079|potassium ion transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_01557	R	R	NA	NA	POPTR_0001s15020	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01558	R	R	NA	NA	POPTR_0001s15030	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01559	A	A1S	Potri.001G150400	Potri.001G150400(AS)	POPTR_0001s15040	sp|Q9LKI5|XPF_ARATH	DNA repair endonuclease UVH1 OS=Arabidopsis thaliana GN=UVH1 PE=1 SV=2	AT5G41150.1	| Symbols: UVH1, ATRAD1, RAD1 | Restriction endonuclease, type II-like superfamily protein | chr5:16473044-16476919 REVERSE LENGTH=956	LOC_Os03g01100.1	protein|endonuclease, putative, expressed	IMGA|Medtr5g013480.1	DNA repair endonuclease UVH1 chr5 4027631-4021517 E EGN_Mt100125 20111014	GO:0000710|meiotic mismatch repair GO:0000712|resolution of meiotic recombination intermediates GO:0000724|double-strand break repair via homologous recombination GO:0006259|DNA metabolic process GO:0006281|DNA repair GO:0006289|nucleotide-excision repair GO:0006296|nucleotide-excision repair, DNA incision, 5'-to lesion GO:0006979|response to oxidative stress GO:0009314|response to radiation	GO:0000014|single-stranded DNA specific endodeoxyribonuclease activity GO:0003677|DNA binding GO:0003697|single-stranded DNA binding GO:0004518|nuclease activity	GO:0000110|nucleotide-excision repair factor 1 complex GO:0005634|nucleus
pt2_01560	A	A1S	Potri.001G150400	Potri.001G150400(AS)	POPTR_0001s15040	sp|Q9LKI5|XPF_ARATH	DNA repair endonuclease UVH1 OS=Arabidopsis thaliana GN=UVH1 PE=1 SV=2	AT5G41150.1	| Symbols: UVH1, ATRAD1, RAD1 | Restriction endonuclease, type II-like superfamily protein | chr5:16473044-16476919 REVERSE LENGTH=956	LOC_Os03g01100.1	protein|endonuclease, putative, expressed	IMGA|Medtr5g013480.1	DNA repair endonuclease UVH1 chr5 4027631-4021517 E EGN_Mt100125 20111014	GO:0000710|meiotic mismatch repair GO:0000712|resolution of meiotic recombination intermediates GO:0000724|double-strand break repair via homologous recombination GO:0006259|DNA metabolic process GO:0006281|DNA repair GO:0006289|nucleotide-excision repair GO:0006296|nucleotide-excision repair, DNA incision, 5'-to lesion GO:0006979|response to oxidative stress GO:0009314|response to radiation	GO:0000014|single-stranded DNA specific endodeoxyribonuclease activity GO:0003677|DNA binding GO:0003697|single-stranded DNA binding GO:0004518|nuclease activity	GO:0000110|nucleotide-excision repair factor 1 complex GO:0005634|nucleus
pt2_01561	A	A1S	Potri.001G150500	Potri.001G150500(AS)	POPTR_0001s15050	sp|P37216|AROG_SOLLC	Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Solanum lycopersicum PE=2 SV=1	AT4G33510.1	| Symbols: DHS2 | 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase | chr4:16116496-16118549 FORWARD LENGTH=507	LOC_Os03g27230.1	protein|phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplast precursor, putative, expressed	IMGA|Medtr5g064500.1	2-dehydro-3-deoxyphosphoheptonate aldolase (3-deoxy-d-arabino-heptulosonate 7-phosphate synthase) chr5 26109513-26113523 F EGN_Mt100125 20111014	GO:0009073|aromatic amino acid family biosynthetic process GO:0009423|chorismate biosynthetic process	GO:0003849|3-deoxy-7-phosphoheptulonate synthase activity GO:0005515|protein binding	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid
pt2_01562	A	A1S	Potri.001G150600	Potri.001G150600(AS)	POPTR_0001s15060	NA	NA	AT2G44730.1	| Symbols: | Alcohol dehydrogenase transcription factor Myb/SANT-like family protein | chr2:18437447-18438565 REVERSE LENGTH=372	LOC_Os10g41460.1	protein|transcription factor like protein, putative, expressed	IMGA|Medtr5g017500.1	hypothetical protein chr5 6140380-6141354 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_01563	A	A1S	Potri.001G150600	Potri.001G150600(AS)	POPTR_0001s15070	NA	NA	AT2G44730.1	| Symbols: | Alcohol dehydrogenase transcription factor Myb/SANT-like family protein | chr2:18437447-18438565 REVERSE LENGTH=372	LOC_Os10g41460.1	protein|transcription factor like protein, putative, expressed	IMGA|Medtr5g017500.1	hypothetical protein chr5 6140380-6141354 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_01564	A	A1S	Potri.001G150700	Potri.001G150700(AS)	POPTR_0001s15080	sp|Q9LZ20|CAAT6_ARATH	Cationic amino acid transporter 6, chloroplastic OS=Arabidopsis thaliana GN=CAT6 PE=2 SV=1	AT5G04770.1	| Symbols: ATCAT6, CAT6 | cationic amino acid transporter 6 | chr5:1379118-1382304 FORWARD LENGTH=583	LOC_Os04g45950.2	protein|amino acid permease family protein, putative, expressed	NA	NA	GO:0003333|amino acid transmembrane transport GO:0006810|transport GO:0009624|response to nematode	GO:0015171|amino acid transmembrane transporter activity GO:0015326|cationic amino acid transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_01565	A	A1S	Potri.001G150800	Potri.001G150800(AS)	POPTR_0001s15090	sp|P75713|YLBA_ECOLI	Uncharacterized protein ylbA OS=Escherichia coli (strain K12) GN=ylbA PE=1 SV=1	AT4G17050.1	| Symbols: UGLYAH | ureidoglycine aminohydrolase | chr4:9589662-9592413 FORWARD LENGTH=298	LOC_Os07g31270.1	protein|cupin 2, conserved barrel domain protein, putative, expressed	IMGA|contig_53805_1.1	Cupin 2 conserved barrel domain protein contig_53805 5741-5177 E PREDN 20111014	GO:0000023|maltose metabolic process GO:0000256|allantoin catabolic process GO:0006355|regulation of transcription, DNA-dependent GO:0019252|starch biosynthetic process GO:0043085|positive regulation of catalytic activity	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0071522|ureidoglycine aminohydrolase activity	NA
pt2_01566	C	C1S	Potri.001G150900	Potri.001G150900(CS)	sp|Q13395|TARB1_HUMAN	Probable methyltransferase TARBP1 OS=Homo sapiens GN=TARBP1 PE=1 SV=1	AT4G17610.1	| Symbols: | tRNA/rRNA methyltransferase (SpoU) family protein | chr4:9805652-9814910 REVERSE LENGTH=1850	LOC_Os03g01110.1	protein|RNA methyltransferase, TrmH family protein, putative, expressed	IMGA|contig_11143_1.1	RNA methyltransferase TrmH family protein expressed contig_11143 1443-668 H PREDN 20111014	GO:0006396|RNA processing	GO:0003723|RNA binding GO:0008173|RNA methyltransferase activity	NA
pt2_01567	A	A1S	Potri.001G150900	Potri.001G150900(AS)	POPTR_0001s15110	sp|Q13395|TARB1_HUMAN	Probable methyltransferase TARBP1 OS=Homo sapiens GN=TARBP1 PE=1 SV=1	AT4G17610.1	| Symbols: | tRNA/rRNA methyltransferase (SpoU) family protein | chr4:9805652-9814910 REVERSE LENGTH=1850	LOC_Os03g01110.1	protein|RNA methyltransferase, TrmH family protein, putative, expressed	IMGA|contig_11143_1.1	RNA methyltransferase TrmH family protein expressed contig_11143 1443-668 H PREDN 20111014	GO:0006396|RNA processing	GO:0003723|RNA binding GO:0008173|RNA methyltransferase activity	NA
pt2_01568	A	A1S	Potri.001G151100	Potri.001G151100(AS)	POPTR_0001s15120	sp|O65351|SUBL_ARATH	Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1	AT2G19170.1	| Symbols: SLP3 | subtilisin-like serine protease 3 | chr2:8314154-8317620 REVERSE LENGTH=815	LOC_Os04g45960.1	protein|OsSub42 - Putative Subtilisin homologue, expressed	IMGA|Medtr5g025010.1	Subtilisin-like protease chr5 9863093-9866617 E EGN_Mt100125 20111014	GO:0006508|proteolysis GO:0008152|metabolic process GO:0043086|negative regulation of catalytic activity	GO:0004252|serine-type endopeptidase activity GO:0008236|serine-type peptidase activity GO:0042802|identical protein binding	GO:0005576|extracellular region GO:0005618|cell wall GO:0016020|membrane GO:0048196|plant extracellular matrix
pt2_01569	A	A1S	Potri.001G151200	Potri.001G151200(AS)	POPTR_0001s15130	sp|Q38946|DHE2_ARATH	Glutamate dehydrogenase 2 OS=Arabidopsis thaliana GN=GDH2 PE=1 SV=1	AT5G07440.3	| Symbols: GDH2 | glutamate dehydrogenase 2 | chr5:2356153-2357546 FORWARD LENGTH=309	LOC_Os04g45970.2	protein|glutamate dehydrogenase protein, putative, expressed	IMGA|contig_52746_2.1	Glutamate dehydrogenase contig_52746 6706-3655 F PREDN 20111014	GO:0006520|cellular amino acid metabolic process GO:0006598|polyamine catabolic process GO:0006944|cellular membrane fusion GO:0009651|response to salt stress GO:0009698|phenylpropanoid metabolic process GO:0042398|cellular modified amino acid biosynthetic process GO:0046482|para-aminobenzoic acid metabolic process GO:0046686|response to cadmium ion GO:0048193|Golgi vesicle transport GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0004352|glutamate dehydrogenase (NAD+) activity GO:0004353|glutamate dehydrogenase [NAD(P)+] activity GO:0005507|copper ion binding GO:0005524|ATP binding GO:0008270|zinc ion binding GO:0016491|oxidoreductase activity GO:0016639|oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor GO:0050897|cobalt ion binding	GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0005774|vacuolar membrane
pt2_01570	A	A2S	Potri.001G151300	Potri.001G151300(AS) Potri.001G151200(AA)	POPTR_0001s15140	NA	NA	AT4G17600.1	| Symbols: LIL3:1 | Chlorophyll A-B binding family protein | chr4:9803759-9804714 FORWARD LENGTH=262	LOC_Os02g03330.1	protein|expressed protein	NA	NA	GO:0006098|pentose-phosphate shunt GO:0006355|regulation of transcription, DNA-dependent GO:0006364|rRNA processing GO:0006417|regulation of translation GO:0009637|response to blue light GO:0009657|plastid organization GO:0009902|chloroplast relocation GO:0009965|leaf morphogenesis GO:0010027|thylakoid membrane organization GO:0010103|stomatal complex morphogenesis GO:0010114|response to red light GO:0010207|photosystem II assembly GO:0010218|response to far red light GO:0015979|photosynthesis GO:0015995|chlorophyll biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0030154|cell differentiation GO:0034660|ncRNA metabolic process GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane
pt2_01571	G	G1	NA	NA	POPTR_0001s15145	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01572	A	A2S	Potri.001G151500	Potri.001G151500(AS) Potri.003G083200(DS)	POPTR_0001s15150	sp|O23547|EXLB1_ARATH	Expansin-like B1 OS=Arabidopsis thaliana GN=EXLB1 PE=2 SV=2	AT4G17030.1	| Symbols: ATEXLB1, EXPR, AT-EXPR, ATEXPR1, ATHEXP BETA 3.1, EXLB1 | expansin-like B1 | chr4:9581817-9583181 REVERSE LENGTH=250	LOC_Os07g31390.1	protein|beta-expansin precursor, putative, expressed	IMGA|Medtr5g013440.1	Expansin-like protein chr5 4008030-4006305 F EGN_Mt100125 20111014	GO:0009826|unidimensional cell growth GO:0009828|plant-type cell wall loosening GO:0019953|sexual reproduction	NA	GO:0005576|extracellular region
pt2_01573	A	A1S	Potri.001G151600	Potri.001G151600(AS)	POPTR_0001s15160	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01574	A	A2S	Potri.001G151700	Potri.001G151700(AS) Potri.003G082800(DS)	POPTR_0001s15170	sp|Q8W4H1|GAT26_ARATH	GATA transcription factor 26 OS=Arabidopsis thaliana GN=GATA26 PE=2 SV=1	AT4G17570.3	| Symbols: GATA26 | GATA transcription factor 26 | chr4:9784329-9786974 REVERSE LENGTH=514	LOC_Os04g46020.2	protein|GATA zinc finger domain containing protein, expressed	IMGA|Medtr5g013370.1	GATA transcription factor chr5 3973364-3977858 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_01575	A	A1S	Potri.001G151800	Potri.001G151800(AS)	POPTR_0001s15180	sp|Q9LD45|BI1_ARATH	Bax inhibitor 1 OS=Arabidopsis thaliana GN=BI-1 PE=1 SV=1	AT5G47120.1	| Symbols: ATBI-1, BI-1, ATBI1, BI1 | BAX inhibitor 1 | chr5:19136071-19137585 FORWARD LENGTH=247	LOC_Os02g03280.2	protein|transmembrane BAX inhibitor motif-containing protein, putative, expressed	IMGA|Medtr5g013340.1	Bax inhibitor chr5 3955866-3958572 F EGN_Mt100125 20111014	GO:0000038|very long-chain fatty acid metabolic process GO:0000165|MAPK cascade GO:0006612|protein targeting to membrane GO:0006983|ER overload response GO:0006984|ER-nucleus signaling pathway GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009605|response to external stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010363|regulation of plant-type hypersensitive response GO:0030968|endoplasmic reticulum unfolded protein response GO:0031348|negative regulation of defense response GO:0034976|response to endoplasmic reticulum stress GO:0043066|negative regulation of apoptotic process GO:0043069|negative regulation of programmed cell death GO:0050832|defense response to fungus GO:0071216|cellular response to biotic stimulus	GO:0005515|protein binding	GO:0005635|nuclear envelope GO:0005737|cytoplasm GO:0005783|endoplasmic reticulum GO:0005886|plasma membrane
pt2_01576	B	B1S	Potri.001G151900	Potri.001G151900(BS)	POPTR_0001s15190	sp|O00311|CDC7_HUMAN	Cell division cycle 7-related protein kinase OS=Homo sapiens GN=CDC7 PE=1 SV=1	AT4G16970.1	| Symbols: | Protein kinase superfamily protein | chr4:9551516-9555766 REVERSE LENGTH=889	LOC_Os10g41390.1	protein|protein kinase domain containing protein, expressed	IMGA|Medtr5g008860.1	hypothetical protein chr5 1727811-1731359 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0045727|positive regulation of translation GO:0046777|protein autophosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01577	B	B1S	Potri.001G152000	Potri.001G152000(BS)	POPTR_0001s15200	sp|Q9SHC8|VAP12_ARATH	Vesicle-associated protein 1-2 OS=Arabidopsis thaliana GN=PVA12 PE=1 SV=1	AT2G45140.1	| Symbols: PVA12 | plant VAP homolog 12 | chr2:18611029-18612971 FORWARD LENGTH=239	LOC_Os08g06020.1	protein|MSP domain containing protein, expressed	IMGA|Medtr5g012420.1	Vesicle-associated membrane protein chr5 3477683-3474442 F EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0006605|protein targeting GO:0006623|protein targeting to vacuole GO:0006886|intracellular protein transport GO:0007030|Golgi organization GO:0007033|vacuole organization GO:0010359|regulation of anion channel activity GO:0016192|vesicle-mediated transport GO:0030968|endoplasmic reticulum unfolded protein response GO:0046482|para-aminobenzoic acid metabolic process GO:0046777|protein autophosphorylation GO:0046907|intracellular transport	GO:0005198|structural molecule activity GO:0005515|protein binding	GO:0000326|protein storage vacuole GO:0005634|nucleus GO:0005783|endoplasmic reticulum GO:0005789|endoplasmic reticulum membrane GO:0005829|cytosol GO:0005886|plasma membrane GO:0016021|integral to membrane
pt2_01578	C	C1S	Potri.001G152100	Potri.001G152100(CS)	sp|Q9LVU1|VAP21_ARATH	Vesicle-associated protein 2-1 OS=Arabidopsis thaliana GN=PVA21 PE=2 SV=1	AT5G47180.2	| Symbols: | Plant VAMP (vesicle-associated membrane protein) family protein | chr5:19161384-19163265 REVERSE LENGTH=220	LOC_Os10g40140.1	protein|MSP domain containing protein, expressed	IMGA|Medtr5g013320.2	Vesicle-associated membrane protein chr5 3948619-3952341 E EGN_Mt100125 20111014	GO:0006612|protein targeting to membrane GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010363|regulation of plant-type hypersensitive response	GO:0005198|structural molecule activity	GO:0005783|endoplasmic reticulum GO:0005886|plasma membrane
pt2_01579	A	A1S	Potri.001G152100	Potri.001G152100(AS)	POPTR_0001s15220	sp|Q9LVU1|VAP21_ARATH	Vesicle-associated protein 2-1 OS=Arabidopsis thaliana GN=PVA21 PE=2 SV=1	AT5G47180.2	| Symbols: | Plant VAMP (vesicle-associated membrane protein) family protein | chr5:19161384-19163265 REVERSE LENGTH=220	LOC_Os10g40140.1	protein|MSP domain containing protein, expressed	IMGA|Medtr5g013320.2	Vesicle-associated membrane protein chr5 3948619-3952341 E EGN_Mt100125 20111014	GO:0006612|protein targeting to membrane GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010363|regulation of plant-type hypersensitive response	GO:0005198|structural molecule activity	GO:0005783|endoplasmic reticulum GO:0005886|plasma membrane
pt2_01580	A	A1S	Potri.001G152100	Potri.001G152100(AS)	POPTR_0001s15220	sp|Q9LVU1|VAP21_ARATH	Vesicle-associated protein 2-1 OS=Arabidopsis thaliana GN=PVA21 PE=2 SV=1	AT5G47180.2	| Symbols: | Plant VAMP (vesicle-associated membrane protein) family protein | chr5:19161384-19163265 REVERSE LENGTH=220	LOC_Os10g40140.1	protein|MSP domain containing protein, expressed	IMGA|Medtr5g013320.2	Vesicle-associated membrane protein chr5 3948619-3952341 E EGN_Mt100125 20111014	GO:0006612|protein targeting to membrane GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010363|regulation of plant-type hypersensitive response	GO:0005198|structural molecule activity	GO:0005783|endoplasmic reticulum GO:0005886|plasma membrane
pt2_01581	A	A1S	Potri.001G152200	Potri.001G152200(AS)	POPTR_0001s15230	sp|Q8W463|RK191_ARATH	50S ribosomal protein L19-1, chloroplastic OS=Arabidopsis thaliana GN=At4g17560 PE=2 SV=1	AT4G17560.1	| Symbols: | Ribosomal protein L19 family protein | chr4:9780343-9781752 FORWARD LENGTH=225	LOC_Os02g43600.1	protein|50S ribosomal protein L19, chloroplast precursor, putative, expressed	IMGA|Medtr5g013300.1	50S ribosomal protein L19 chr5 3935474-3938632 F EGN_Mt100125 20111014	GO:0006412|translation GO:0010267|production of ta-siRNAs involved in RNA interference GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0051607|defense response to virus	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005840|ribosome GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope GO:0016020|membrane
pt2_01582	A	A1S	Potri.001G152300	Potri.001G152300(AS)	POPTR_0001s15240	sp|O23596|GLPT4_ARATH	Putative glycerol-3-phosphate transporter 4 OS=Arabidopsis thaliana GN=At4g17550 PE=2 SV=2	AT4G17550.1	| Symbols: | Major facilitator superfamily protein | chr4:9777938-9779738 REVERSE LENGTH=544	LOC_Os04g46880.2	protein|transporter, major facilitator family, putative, expressed	NA	NA	GO:0008643|carbohydrate transport GO:0015706|nitrate transport GO:0055062|phosphate ion homeostasis GO:0055085|transmembrane transport	GO:0005351|sugar:hydrogen symporter activity	GO:0005774|vacuolar membrane GO:0009507|chloroplast GO:0016021|integral to membrane
pt2_01583	A	A1S	Potri.001G152500	Potri.001G152500(AS)	POPTR_0001s15250	NA	NA	AT5G02890.1	| Symbols: | HXXXD-type acyl-transferase family protein | chr5:670207-671454 REVERSE LENGTH=353	LOC_Os02g43670.1	protein|transferase family protein, putative, expressed	IMGA|Medtr5g013270.1	Omega-hydroxypalmitate O-feruloyl transferase chr5 3922313-3923681 H EGN_Mt100125 20111014	NA	GO:0016740|transferase activity GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0005575|cellular_component
pt2_01584	A	A1S	Potri.001G152600	Potri.001G152600(AS)	POPTR_0001s15260	sp|Q40412|ABA2_NICPL	Zeaxanthin epoxidase, chloroplastic OS=Nicotiana plumbaginifolia GN=ABA2 PE=1 SV=1	AT2G35660.1	| Symbols: CTF2A | FAD/NAD(P)-binding oxidoreductase family protein | chr2:14988499-14990320 FORWARD LENGTH=439	LOC_Os07g30960.1	protein|monooxygenase, putative, expressed	IMGA|Medtr5g013250.1	Zeaxanthin epoxidase chr5 3915609-3913151 E EGN_Mt100125 20111014	GO:0008152|metabolic process	GO:0004497|monooxygenase activity GO:0016491|oxidoreductase activity	GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_01585	A	A1S	Potri.001G152700	Potri.001G152700(AS)	POPTR_0001s15270	NA	NA	AT2G35658.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G16840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr2:14990592-14990906 REVERSE LENGTH=104	NA	NA	IMGA|Medtr5g013240.1	hypothetical protein chr5 3912369-3912748 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus GO:0009507|chloroplast
pt2_01586	B	B1S	Potri.001G152800	Potri.001G152800(BS)	POPTR_0001s15280	sp|Q05737|YPTM2_MAIZE	GTP-binding protein YPTM2 OS=Zea mays GN=YPTM2 PE=2 SV=1	AT1G02130.1	| Symbols: ATRAB1B, ARA5, ARA-5, ATRABD2A, RABD2A, RA-5 | RAS 5 | chr1:400350-401788 REVERSE LENGTH=203	LOC_Os01g08450.1	protein|ras-related protein, putative, expressed	IMGA|Medtr1g068730.1	Ras-like protein chr1 17072901-17066690 F EGN_Mt100125 20111014	GO:0006888|ER to Golgi vesicle-mediated transport GO:0007264|small GTPase mediated signal transduction GO:0015031|protein transport GO:0046686|response to cadmium ion	GO:0005525|GTP binding	GO:0000139|Golgi membrane GO:0005773|vacuole GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0032588|trans-Golgi network membrane
pt2_01587	A	A1S	Potri.001G152900	Potri.001G152900(AS)	POPTR_0001s15285	sp|Q9M4P3|PP316_ARATH	Pentatricopeptide repeat-containing protein At4g16835, mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3	AT4G16835.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:9472763-9474803 FORWARD LENGTH=656	LOC_Os08g05750.1	protein|pentatricopeptide, putative, expressed	IMGA|Medtr5g008600.1	Pentatricopeptide repeat-containing protein chr5 1604164-1608184 H EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_01588	A	A2S	Potri.001G153000	Potri.001G153000(AS) Potri.003G081600(DS)	POPTR_0001s15290	NA	NA	AT4G17520.1	| Symbols: | Hyaluronan / mRNA binding family | chr4:9771496-9773313 FORWARD LENGTH=360	LOC_Os01g52390.1	protein|plasminogen activator inhibitor 1 RNA-binding protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003723|RNA binding	GO:0005634|nucleus GO:0005777|peroxisome GO:0005829|cytosol
pt2_01589	A	A1S	Potri.001G153100	Potri.001G153100(AS)	POPTR_0001s15300	sp|O23522|PLA14_ARATH	Phospholipase A1-Ibeta2, chloroplastic OS=Arabidopsis thaliana GN=At4g16820 PE=1 SV=2	AT4G16820.1	| Symbols: PLA-I{beta]2 | alpha/beta-Hydrolases superfamily protein | chr4:9467563-9469116 FORWARD LENGTH=517	LOC_Os02g43700.1	protein|triacylglycerol lipase like protein, putative, expressed	IMGA|Medtr5g013230.1	Lipase chr5 3909366-3911161 F EGN_Mt100125 20111014	GO:0006629|lipid metabolic process GO:0009693|ethylene biosynthetic process	GO:0004806|triglyceride lipase activity GO:0008970|phosphatidylcholine 1-acylhydrolase activity GO:0047714|galactolipase activity	GO:0009507|chloroplast
pt2_01590	A	A1S	Potri.001G153200	Potri.001G153200(AS)	POPTR_0001s15310	NA	NA	AT1G05380.2	| Symbols: | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein | chr1:1577231-1582190 FORWARD LENGTH=1138	LOC_Os07g07690.2	protein|PHD-finger domain containing protein, expressed	IMGA|Medtr1g072130.1	hypothetical protein chr1 17983341-17973773 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_01591	A	A1S	Potri.001G153300	Potri.001G153300(AS)	POPTR_0001s15320	sp|Q54HG7|AUHM_DICDI	Methylglutaconyl-CoA hydratase, mitochondrial OS=Dictyostelium discoideum GN=auh PE=3 SV=1	AT4G16800.1	| Symbols: | ATP-dependent caseinolytic (Clp) protease/crotonase family protein | chr4:9454931-9457000 REVERSE LENGTH=301	LOC_Os02g43720.1	protein|enoyl-CoA hydratase/isomerase family protein, putative, expressed	IMGA|contig_53750_1.1	Fatty acid oxidation complex subunit alpha contig_53750 5019-50 E PREDN 20111014	GO:0006631|fatty acid metabolic process GO:0008152|metabolic process	GO:0003824|catalytic activity GO:0004300|enoyl-CoA hydratase activity	GO:0005739|mitochondrion
pt2_01592	A	A2S	Potri.001G153400	Potri.001G153400(AS) Potri.003G080900(BS)	POPTR_0001s15330	sp|Q8YXQ7|CARA_NOSS1	Carbamoyl-phosphate synthase small chain OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=carA PE=3 SV=1	AT3G27740.1	| Symbols: CARA | carbamoyl phosphate synthetase A | chr3:10281470-10283792 REVERSE LENGTH=430	LOC_Os02g47850.2	protein|class I glutamine amidotransferase, putative, expressed	NA	NA	GO:0001510|RNA methylation GO:0006164|purine nucleotide biosynthetic process GO:0006543|glutamine catabolic process GO:0009220|pyrimidine ribonucleotide biosynthetic process GO:0016036|cellular response to phosphate starvation GO:0070409|carbamoyl phosphate biosynthetic process	GO:0004088|carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity	GO:0005951|carbamoyl-phosphate synthase complex GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_01593	A	A1S	Potri.001G153500	Potri.001G153500(AS)	POPTR_0001s15340	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006511|ubiquitin-dependent protein catabolic process	GO:0004221|ubiquitin thiolesterase activity	GO:0005622|intracellular GO:0005829|cytosol GO:0009507|chloroplast
pt2_01594	A	A1S	Potri.001G153600	Potri.001G153600(AS)	POPTR_0001s15350	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01595	A	A1S	Potri.001G153800	Potri.001G153800(AS)	POPTR_0001s15360	sp|Q39202|RLK1_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 OS=Arabidopsis thaliana GN=RLK1 PE=2 SV=2	AT5G60900.1	| Symbols: RLK1 | receptor-like protein kinase 1 | chr5:24498467-24501494 REVERSE LENGTH=748	LOC_Os04g39930.1	protein|receptor-like protein kinase, putative, expressed	IMGA|Medtr5g013130.1	Kinase-like protein chr5 3871934-3874336 H EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0006355|regulation of transcription, DNA-dependent GO:0006468|protein phosphorylation GO:0006612|protein targeting to membrane GO:0009617|response to bacterium GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0031348|negative regulation of defense response GO:0035304|regulation of protein dephosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_01596	A	A2S	Potri.001G153900	Potri.001G153900(AS) Potri.003G081100(DS)	POPTR_0001s15370	sp|Q94JU3|CSN7_ARATH	COP9 signalosome complex subunit 7 OS=Arabidopsis thaliana GN=CSN7 PE=1 SV=1	AT1G02090.3	| Symbols: FUS5, CSN7, COP15, ATCSN7 | Proteasome component (PCI) domain protein | chr1:388223-389568 REVERSE LENGTH=237	LOC_Os07g30840.3	protein|proteasome subunit, putative, expressed	NA	NA	GO:0009640|photomorphogenesis GO:0010387|signalosome assembly GO:0010388|cullin deneddylation GO:0016567|protein ubiquitination GO:0016571|histone methylation GO:0016579|protein deubiquitination GO:0045893|positive regulation of transcription, DNA-dependent	GO:0004708|MAP kinase kinase activity GO:0005515|protein binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol GO:0008180|signalosome
pt2_01597	A	A1S	Potri.001G154000	Potri.001G154000(AS)	POPTR_0001s15380	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01598	A	A1S	Potri.001G154100	Potri.001G154100(AS)	POPTR_0001s15390	sp|O80337|EF100_ARATH	Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana GN=ERF1A PE=1 SV=2	AT4G17500.1	| Symbols: ATERF-1, ERF-1 | ethylene responsive element binding factor 1 | chr4:9759405-9760211 FORWARD LENGTH=268	LOC_Os02g43790.1	protein|ethylene-responsive transcription factor, putative, expressed	IMGA|AC233556_27.1	Ethylene-responsive transcription factor AC233556.3 105457-106057 H EGN_Mt100125 20111014	GO:0002679|respiratory burst involved in defense response GO:0006355|regulation of transcription, DNA-dependent GO:0009414|response to water deprivation GO:0009723|response to ethylene stimulus GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009873|ethylene mediated signaling pathway GO:0010200|response to chitin GO:0035556|intracellular signal transduction GO:0042538|hyperosmotic salinity response GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus GO:0005643|nuclear pore
pt2_01599	A	A1S	Potri.001G154200	Potri.001G154200(AS)	POPTR_0001s15400	sp|Q8VZ91|EF103_ARATH	Ethylene-responsive transcription factor 6 OS=Arabidopsis thaliana GN=ERF6 PE=2 SV=2	AT4G17490.1	| Symbols: ATERF6, ERF-6-6, ERF6 | ethylene responsive element binding factor 6 | chr4:9752973-9753821 REVERSE LENGTH=282	LOC_Os02g43820.1	protein|AP2 domain containing protein, expressed	IMGA|AC233556_27.1	Ethylene-responsive transcription factor AC233556.3 105457-106057 H EGN_Mt100125 20111014	GO:0002679|respiratory burst involved in defense response GO:0006355|regulation of transcription, DNA-dependent GO:0009409|response to cold GO:0009873|ethylene mediated signaling pathway GO:0010200|response to chitin GO:0035556|intracellular signal transduction GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_01600	A	A1S	Potri.001G154300	Potri.001G154300(AS)	POPTR_0001s15410	sp|Q8L7W2|NUDT8_ARATH	Nudix hydrolase 8 OS=Arabidopsis thaliana GN=NUDT8 PE=2 SV=2	AT5G47240.1	| Symbols: atnudt8, NUDT8 | nudix hydrolase homolog 8 | chr5:19183806-19185467 FORWARD LENGTH=369	LOC_Os04g46280.1	protein|hydrolase, NUDIX family, domain containing protein, expressed	NA	NA	GO:0009611|response to wounding	GO:0016787|hydrolase activity	GO:0005829|cytosol
pt2_01601	A	A2S	Potri.001G154400	Potri.001G154400(AS) Potri.003G080300(DS)	POPTR_0001s15420	sp|Q93VG8|PPDEX_ARATH	DeSI-like protein At4g17486 OS=Arabidopsis thaliana GN=At4g17486 PE=2 SV=1	AT5G47310.1	| Symbols: | PPPDE putative thiol peptidase family protein | chr5:19201325-19202674 FORWARD LENGTH=245	LOC_Os03g01130.2	protein|ethylene-responsive element-binding protein, putative, expressed	IMGA|Medtr5g013040.1	hypothetical protein chr5 3837813-3834899 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005737|cytoplasm
pt2_01602	A	A1S	Potri.001G154400	Potri.001G154400(AS)	POPTR_0001s15420	sp|Q93VG8|PPDEX_ARATH	DeSI-like protein At4g17486 OS=Arabidopsis thaliana GN=At4g17486 PE=2 SV=1	AT5G47310.1	| Symbols: | PPPDE putative thiol peptidase family protein | chr5:19201325-19202674 FORWARD LENGTH=245	LOC_Os03g01130.2	protein|ethylene-responsive element-binding protein, putative, expressed	IMGA|Medtr5g013040.1	hypothetical protein chr5 3837813-3834899 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005737|cytoplasm
pt2_01603	A	A1S	Potri.001G154400	Potri.001G154400(AS)	POPTR_0001s15420	sp|Q93VG8|PPDEX_ARATH	DeSI-like protein At4g17486 OS=Arabidopsis thaliana GN=At4g17486 PE=2 SV=1	AT5G47310.1	| Symbols: | PPPDE putative thiol peptidase family protein | chr5:19201325-19202674 FORWARD LENGTH=245	LOC_Os03g01130.2	protein|ethylene-responsive element-binding protein, putative, expressed	IMGA|Medtr5g013040.1	hypothetical protein chr5 3837813-3834899 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005737|cytoplasm
pt2_01604	A	A1S	Potri.001G154400	Potri.001G154400(AS)	POPTR_0001s15420	sp|Q93VG8|PPDEX_ARATH	DeSI-like protein At4g17486 OS=Arabidopsis thaliana GN=At4g17486 PE=2 SV=1	AT5G47310.1	| Symbols: | PPPDE putative thiol peptidase family protein | chr5:19201325-19202674 FORWARD LENGTH=245	LOC_Os03g01130.2	protein|ethylene-responsive element-binding protein, putative, expressed	IMGA|Medtr5g013040.1	hypothetical protein chr5 3837813-3834899 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005737|cytoplasm
pt2_01605	A	A1S	Potri.001G154500	Potri.001G154500(AS)	POPTR_0001s15430	sp|Q9SKK8|ATL22_ARATH	RING-H2 finger protein ATL22 OS=Arabidopsis thaliana GN=ATL22 PE=2 SV=2	AT2G25410.1	| Symbols: | RING/U-box superfamily protein | chr2:10814470-10815917 FORWARD LENGTH=377	LOC_Os01g02560.1	protein|Ser/Thr receptor-like kinase, putative, expressed	IMGA|Medtr5g013030.1	RING-H2 finger protein ATL1E chr5 3833770-3832345 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0008270|zinc ion binding	GO:0005576|extracellular region
pt2_01606	A	A1S	Potri.001G154600	Potri.001G154600(AS)	POPTR_0001s15440	sp|Q20390|PPT1_CAEEL	Palmitoyl-protein thioesterase 1 OS=Caenorhabditis elegans GN=ppt-1 PE=2 SV=2	AT3G60340.2	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr3:22304395-22306389 FORWARD LENGTH=338	LOC_Os03g01150.1	protein|palmitoyl-protein thioesterase 1 precursor, putative, expressed	IMGA|Medtr5g013020.1	Palmitoyl-protein thioesterase chr5 3819826-3814736 F EGN_Mt100125 20111014	GO:0006464|cellular protein modification process	GO:0008474|palmitoyl-(protein) hydrolase activity	GO:0005773|vacuole GO:0005829|cytosol
pt2_01607	A	A1S	Potri.001G154600	Potri.001G154600(AS)	POPTR_0001s15440	sp|Q20390|PPT1_CAEEL	Palmitoyl-protein thioesterase 1 OS=Caenorhabditis elegans GN=ppt-1 PE=2 SV=2	AT3G60340.2	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr3:22304395-22306389 FORWARD LENGTH=338	LOC_Os03g01150.1	protein|palmitoyl-protein thioesterase 1 precursor, putative, expressed	IMGA|Medtr5g013020.1	Palmitoyl-protein thioesterase chr5 3819826-3814736 F EGN_Mt100125 20111014	GO:0006464|cellular protein modification process	GO:0008474|palmitoyl-(protein) hydrolase activity	GO:0005773|vacuole GO:0005829|cytosol
pt2_01608	A	A1S	Potri.001G154700	Potri.001G154700(AS)	POPTR_0001s15460	sp|Q9ZQP1|DSP8_ARATH	Putative dual specificity protein phosphatase DSP8 OS=Arabidopsis thaliana GN=DSP8 PE=2 SV=2	AT2G35680.1	| Symbols: | Phosphotyrosine protein phosphatases superfamily protein | chr2:14997004-14998590 REVERSE LENGTH=337	LOC_Os10g41240.1	protein|dual specificity protein phosphatase, putative, expressed	NA	NA	GO:0006470|protein dephosphorylation GO:0007243|intracellular protein kinase cascade GO:0016311|dephosphorylation GO:0043407|negative regulation of MAP kinase activity GO:0046855|inositol phosphate dephosphorylation	GO:0004439|phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity GO:0004725|protein tyrosine phosphatase activity GO:0008138|protein tyrosine/serine/threonine phosphatase activity GO:0016791|phosphatase activity	GO:0005737|cytoplasm
pt2_01609	A	A1S	Potri.001G154900	Potri.001G154900(AS)	POPTR_0001s15470	sp|Q9LVS3|PP422_ARATH	Pentatricopeptide repeat-containing protein At5g47360 OS=Arabidopsis thaliana GN=At5g47360 PE=2 SV=1	AT5G47360.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:19214445-19215878 REVERSE LENGTH=477	LOC_Os03g12430.1	protein|PPR repeat containing protein, putative, expressed	IMGA|Medtr5g007250.1	Pentatricopeptide repeat-containing protein chr5 1020898-1025108 H EGN_Mt100125 20111014	NA	NA	GO:0005739|mitochondrion
pt2_01610	A	A1S	Potri.001G155000	Potri.001G155000(AS)	POPTR_0001s15480	NA	NA	AT4G16790.1	| Symbols: | hydroxyproline-rich glycoprotein family protein | chr4:9451747-9453168 REVERSE LENGTH=473	LOC_Os04g46330.1	protein|expressed protein	NA	NA	NA	NA	GO:0005634|nucleus
pt2_01611	A	A1S	Potri.001G155100	Potri.001G155100(AS)	POPTR_0001s15490	sp|Q05466|HAT4_ARATH	Homeobox-leucine zipper protein HAT4 OS=Arabidopsis thaliana GN=HAT4 PE=1 SV=1	AT4G16780.1	| Symbols: ATHB-2, HAT4, ATHB2, HB-2 | homeobox protein 2 | chr4:9449291-9450604 FORWARD LENGTH=284	LOC_Os04g46350.1	protein|homeobox associated leucine zipper, putative, expressed	IMGA|Medtr5g013010.1	Homeobox-leucine zipper protein HOX17 chr5 3801008-3802889 F EGN_Mt100125 20111014	GO:0006351|transcription, DNA-dependent GO:0006355|regulation of transcription, DNA-dependent GO:0009641|shade avoidance GO:0009733|response to auxin stimulus GO:0009734|auxin mediated signaling pathway GO:0009826|unidimensional cell growth GO:0045892|negative regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_01612	A	A1S	Potri.001G155200	Potri.001G155200(AS)	POPTR_0001s15500	sp|Q84JU6|HOS1_ARATH	E3 ubiquitin-protein ligase HOS1 OS=Arabidopsis thaliana GN=HOS1 PE=1 SV=1	AT2G39810.1	| Symbols: HOS1 | ubiquitin-protein ligases | chr2:16612941-16617802 FORWARD LENGTH=927	LOC_Os03g52700.1	protein|expressed protein	IMGA|Medtr5g012940.1	E3 ubiquitin-protein ligase HOS1 chr5 3770397-3763119 H EGN_Mt100125 20111014	GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0006346|methylation-dependent chromatin silencing GO:0006355|regulation of transcription, DNA-dependent GO:0007267|cell-cell signaling GO:0009409|response to cold GO:0009616|virus induced gene silencing GO:0009640|photomorphogenesis GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009909|regulation of flower development GO:0009933|meristem structural organization GO:0010162|seed dormancy process GO:0010182|sugar mediated signaling pathway GO:0010228|vegetative to reproductive phase transition of meristem GO:0010267|production of ta-siRNAs involved in RNA interference GO:0010388|cullin deneddylation GO:0016246|RNA interference GO:0016567|protein ubiquitination GO:0016571|histone methylation GO:0016579|protein deubiquitination GO:0019915|lipid storage GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0043687|post-translational protein modification GO:0045892|negative regulation of transcription, DNA-dependent GO:0045893|positive regulation of transcription, DNA-dependent GO:0050826|response to freezing	GO:0004842|ubiquitin-protein ligase activity	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_01613	A	A2S	Potri.001G155300	Potri.001G155300(AS) Potri.003G079500(DS)	POPTR_0001s15510	sp|Q2V9B0|MY1R1_SOLTU	Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1	AT5G47390.1	| Symbols: | myb-like transcription factor family protein | chr5:19227001-19228546 FORWARD LENGTH=365	LOC_Os10g41200.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr5g037080.1	DIV1B protein chr5 15763383-15765765 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009651|response to salt stress GO:0009723|response to ethylene stimulus GO:0009737|response to abscisic acid stimulus GO:0009739|response to gibberellin stimulus GO:0009751|response to salicylic acid stimulus GO:0009753|response to jasmonic acid stimulus GO:0046686|response to cadmium ion	GO:0003676|nucleic acid binding GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_01614	A	A1S	Potri.001G155400	Potri.001G155400(AS)	POPTR_0001s15520	NA	NA	AT4G17430.1	| Symbols: | O-fucosyltransferase family protein | chr4:9725201-9726801 REVERSE LENGTH=507	LOC_Os10g41180.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0016757|transferase activity, transferring glycosyl groups	GO:0005634|nucleus GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_01615	A	A1S	Potri.001G155500	Potri.001G155500(AS)	POPTR_0001s15530	sp|O65202|ACOX1_ARATH	Peroxisomal acyl-coenzyme A oxidase 1 OS=Arabidopsis thaliana GN=ACX1 PE=1 SV=1	AT4G16760.1	| Symbols: ACX1, ATACX1 | acyl-CoA oxidase 1 | chr4:9424930-9428689 REVERSE LENGTH=664	LOC_Os06g01390.1	protein|acyl-coenzyme A oxidase 1.2, peroxisomal, putative, expressed	IMGA|Medtr5g012920.1	Peroxisomal acyl-CoA oxidase 1A chr5 3754455-3748052 E EGN_Mt100125 20111014	GO:0001676|long-chain fatty acid metabolic process GO:0002213|defense response to insect GO:0006612|protein targeting to membrane GO:0006631|fatty acid metabolic process GO:0006633|fatty acid biosynthetic process GO:0006635|fatty acid beta-oxidation GO:0008152|metabolic process GO:0009555|pollen development GO:0009611|response to wounding GO:0009620|response to fungus GO:0009695|jasmonic acid biosynthetic process GO:0009753|response to jasmonic acid stimulus GO:0009863|salicylic acid mediated signaling pathway GO:0010363|regulation of plant-type hypersensitive response GO:0043069|negative regulation of programmed cell death GO:0046686|response to cadmium ion GO:0050832|defense response to fungus GO:0055114|oxidation-reduction process	GO:0003995|acyl-CoA dehydrogenase activity GO:0003997|acyl-CoA oxidase activity GO:0016627|oxidoreductase activity, acting on the CH-CH group of donors GO:0050660|flavin adenine dinucleotide binding	GO:0005737|cytoplasm GO:0005777|peroxisome GO:0009506|plasmodesma
pt2_01616	G	G1	NA	NA	POPTR_0001s15540	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01617	A	A1S	Potri.001G155700	Potri.001G155700(AS)	POPTR_0001s15550	sp|Q8LBQ7|ERF34_ARATH	Ethylene-responsive transcription factor ERF034 OS=Arabidopsis thaliana GN=ERF034 PE=2 SV=2	AT2G44940.1	| Symbols: | Integrase-type DNA-binding superfamily protein | chr2:18537294-18538181 FORWARD LENGTH=295	LOC_Os02g43940.1	protein|AP2 domain containing protein, expressed	IMGA|Medtr5g012910.1	Ethylene-responsive transcription factor TINY chr5 3739805-3739260 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_01618	A	A1S	Potri.001G155800	Potri.001G155800(AS)	POPTR_0001s15560	NA	NA	AT5G47400.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:19229162-19232586 FORWARD LENGTH=862	LOC_Os10g41120.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_01619	A	A2S	Potri.001G155900	Potri.001G155900(AS) Potri.003G078900(DS)	POPTR_0001s15570	NA	NA	AT5G47420.1	| Symbols: | Tryptophan RNA-binding attenuator protein-like | chr5:19233013-19234838 FORWARD LENGTH=282	LOC_Os03g53600.1	protein|HTH DNA-binding protein, putative, expressed	NA	NA	GO:0006984|ER-nucleus signaling pathway GO:0008150|biological_process GO:0034976|response to endoplasmic reticulum stress GO:0071216|cellular response to biotic stimulus	GO:0003674|molecular_function	GO:0005783|endoplasmic reticulum GO:0009507|chloroplast
pt2_01620	A	A1S	Potri.001G156000	Potri.001G156000(AS)	POPTR_0001s15580	sp|P97868|RBBP6_MOUSE	E3 ubiquitin-protein ligase RBBP6 OS=Mus musculus GN=Rbbp6 PE=1 SV=5	AT5G47430.1	| Symbols: | DWNN domain, a CCHC-type zinc finger | chr5:19235819-19240596 REVERSE LENGTH=892	LOC_Os10g29560.1	protein|transposon protein, putative, CACTA, En/Spm sub-class, expressed	IMGA|Medtr5g097760.1	Retinoblastoma-binding protein chr5 41777592-41768969 E EGN_Mt100125 20111014	GO:0006470|protein dephosphorylation GO:0007062|sister chromatid cohesion GO:0008150|biological_process GO:0031048|chromatin silencing by small RNA GO:0045132|meiotic chromosome segregation	GO:0003676|nucleic acid binding GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_01621	A	A1S	Potri.001G156100	Potri.001G156100(AS)	POPTR_0001s15590	sp|O82528|RL15_PETHY	60S ribosomal protein L15 OS=Petunia hybrida GN=RPL15 PE=2 SV=1	AT4G16720.1	| Symbols: | Ribosomal protein L23/L15e family protein | chr4:9400156-9401315 REVERSE LENGTH=204	LOC_Os05g19370.1	protein|60S ribosomal protein L15, putative, expressed	NA	NA	GO:0001510|RNA methylation GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005737|cytoplasm GO:0005774|vacuolar membrane GO:0005829|cytosol GO:0005840|ribosome GO:0005886|plasma membrane GO:0022625|cytosolic large ribosomal subunit GO:0022626|cytosolic ribosome
pt2_01622	A	A1S	Potri.001G156200	Potri.001G156200(AS)	POPTR_0001s15600	sp|F4JP48|MSH4_ARATH	DNA mismatch repair protein MSH4 OS=Arabidopsis thaliana GN=MSH4 PE=2 SV=1	AT4G17380.1	| Symbols: MSH4, ATMSH4 | MUTS-like protein 4 | chr4:9708742-9714068 FORWARD LENGTH=792	LOC_Os07g30240.1	protein|mutS family domain IV containing protein, expressed	IMGA|Medtr5g012900.1	DNA mismatch repair protein mutS chr5 3725493-3734961 H EGN_Mt100125 20111014	GO:0000710|meiotic mismatch repair GO:0006200|ATP catabolic process GO:0006298|mismatch repair GO:0006302|double-strand break repair GO:0006312|mitotic recombination GO:0007062|sister chromatid cohesion GO:0007067|mitosis GO:0007126|meiosis GO:0007128|meiotic prophase I GO:0007129|synapsis GO:0007131|reciprocal meiotic recombination GO:0010332|response to gamma radiation GO:0010564|regulation of cell cycle process GO:0032204|regulation of telomere maintenance GO:0032504|multicellular organism reproduction GO:0042138|meiotic DNA double-strand break formation GO:0043247|telomere maintenance in response to DNA damage GO:0045132|meiotic chromosome segregation GO:0045143|homologous chromosome segregation GO:0051026|chiasma assembly	GO:0003684|damaged DNA binding GO:0005524|ATP binding GO:0008094|DNA-dependent ATPase activity GO:0030983|mismatched DNA binding	GO:0000794|condensed nuclear chromosome GO:0000795|synaptonemal complex GO:0005634|nucleus GO:0009506|plasmodesma GO:0032300|mismatch repair complex
pt2_01623	C	C1S	Potri.001G156200	Potri.001G156200(CS)	sp|F4JP48|MSH4_ARATH	DNA mismatch repair protein MSH4 OS=Arabidopsis thaliana GN=MSH4 PE=2 SV=1	AT4G17380.1	| Symbols: MSH4, ATMSH4 | MUTS-like protein 4 | chr4:9708742-9714068 FORWARD LENGTH=792	LOC_Os07g30240.1	protein|mutS family domain IV containing protein, expressed	IMGA|Medtr5g012900.1	DNA mismatch repair protein mutS chr5 3725493-3734961 H EGN_Mt100125 20111014	GO:0000710|meiotic mismatch repair GO:0006200|ATP catabolic process GO:0006298|mismatch repair GO:0006302|double-strand break repair GO:0006312|mitotic recombination GO:0007062|sister chromatid cohesion GO:0007067|mitosis GO:0007126|meiosis GO:0007128|meiotic prophase I GO:0007129|synapsis GO:0007131|reciprocal meiotic recombination GO:0010332|response to gamma radiation GO:0010564|regulation of cell cycle process GO:0032204|regulation of telomere maintenance GO:0032504|multicellular organism reproduction GO:0042138|meiotic DNA double-strand break formation GO:0043247|telomere maintenance in response to DNA damage GO:0045132|meiotic chromosome segregation GO:0045143|homologous chromosome segregation GO:0051026|chiasma assembly	GO:0003684|damaged DNA binding GO:0005524|ATP binding GO:0008094|DNA-dependent ATPase activity GO:0030983|mismatched DNA binding	GO:0000794|condensed nuclear chromosome GO:0000795|synaptonemal complex GO:0005634|nucleus GO:0009506|plasmodesma GO:0032300|mismatch repair complex
pt2_01624	C	C2S	Potri.003G078600	Potri.003G078600(CS) Potri.001G156200(CS)	sp|F4JP48|MSH4_ARATH	DNA mismatch repair protein MSH4 OS=Arabidopsis thaliana GN=MSH4 PE=2 SV=1	AT4G17380.1	| Symbols: MSH4, ATMSH4 | MUTS-like protein 4 | chr4:9708742-9714068 FORWARD LENGTH=792	LOC_Os07g30240.1	protein|mutS family domain IV containing protein, expressed	IMGA|Medtr5g012900.1	DNA mismatch repair protein mutS chr5 3725493-3734961 H EGN_Mt100125 20111014	GO:0000710|meiotic mismatch repair GO:0006200|ATP catabolic process GO:0006298|mismatch repair GO:0006302|double-strand break repair GO:0006312|mitotic recombination GO:0007062|sister chromatid cohesion GO:0007067|mitosis GO:0007126|meiosis GO:0007128|meiotic prophase I GO:0007129|synapsis GO:0007131|reciprocal meiotic recombination GO:0010332|response to gamma radiation GO:0010564|regulation of cell cycle process GO:0032204|regulation of telomere maintenance GO:0032504|multicellular organism reproduction GO:0042138|meiotic DNA double-strand break formation GO:0043247|telomere maintenance in response to DNA damage GO:0045132|meiotic chromosome segregation GO:0045143|homologous chromosome segregation GO:0051026|chiasma assembly	GO:0003684|damaged DNA binding GO:0005524|ATP binding GO:0008094|DNA-dependent ATPase activity GO:0030983|mismatched DNA binding	GO:0000794|condensed nuclear chromosome GO:0000795|synaptonemal complex GO:0005634|nucleus GO:0009506|plasmodesma GO:0032300|mismatch repair complex
pt2_01625	B	B1S	Potri.001G156300	Potri.001G156300(BS)	POPTR_0001s15630	NA	NA	AT2G01410.1	| Symbols: | NHL domain-containing protein | chr2:175209-176372 REVERSE LENGTH=387	LOC_Os01g42140.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005774|vacuolar membrane GO:0005783|endoplasmic reticulum GO:0005886|plasma membrane
pt2_01626	A	A1S	Potri.001G156400	Potri.001G156400(AS)	POPTR_0001s15640	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01627	A	A1S	Potri.001G156600	Potri.001G156600(AS)	POPTR_0001s15650	sp|O34990|PURU_BACSU	Formyltetrahydrofolate deformylase OS=Bacillus subtilis (strain 168) GN=purU PE=3 SV=2	AT5G47435.1	| Symbols: | formyltetrahydrofolate deformylase, putative | chr5:19241779-19243424 FORWARD LENGTH=323	LOC_Os03g01222.4	protein|formyl transferase, putative, expressed	IMGA|Medtr5g012850.1	Methionyl-tRNA formyltransferase chr5 3689024-3691240 F EGN_Mt100125 20111014	GO:0006189|'de novo' IMP biosynthetic process GO:0009058|biosynthetic process GO:0009152|purine ribonucleotide biosynthetic process GO:0009853|photorespiration GO:0046653|tetrahydrofolate metabolic process	GO:0008864|formyltetrahydrofolate deformylase activity GO:0016742|hydroxymethyl-, formyl- and related transferase activity	GO:0005739|mitochondrion
pt2_01628	A	A3S	Potri.T151700	Potri.T151700(AS) Potri.001G156700(AS) Potri.001G156600(AA)	POPTR_0001s15660	NA	NA	AT4G16670.1	| Symbols: | Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region | chr4:9385326-9387570 FORWARD LENGTH=429	LOC_Os10g41060.1	protein|expressed protein	IMGA|Medtr5g012870.1	hypothetical protein chr5 3695800-3693100 F EGN_Mt100125 20111014	GO:0007165|signal transduction	GO:0005543|phospholipid binding GO:0035091|phosphatidylinositol binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01629	A	A5S	Potri.001G156800	Potri.001G156800(AS) Potri.003G034000(BS) Potri.017G104500(DS) Potri.018G090500(DS) Potri.008G223300(DS)	POPTR_0001s15665	NA	NA	NA	NA	LOC_Os08g39580.1	protein|zinc knuckle family protein, expressed	NA	NA	NA	NA	NA
pt2_01630	A	A2S	Potri.001G156900	Potri.001G156900(AS) Potri.T151600(BS)	POPTR_0001s15680	sp|Q5XF59|HIBC4_ARATH	3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial OS=Arabidopsis thaliana GN=At3g60510 PE=2 SV=1	AT3G60510.1	| Symbols: | ATP-dependent caseinolytic (Clp) protease/crotonase family protein | chr3:22357141-22360003 REVERSE LENGTH=401	LOC_Os10g40540.1	protein|enoyl-CoA hydratase/isomerase family protein, putative, expressed	IMGA|Medtr1g014040.1	3-hydroxyisobutyryl-CoA hydrolase-like protein chr1 3619461-3610001 F EGN_Mt100125 20111014	GO:0008152|metabolic process	GO:0003824|catalytic activity	GO:0005739|mitochondrion
pt2_01631	A	A1S	Potri.001G157000	Potri.001G157000(AS)	POPTR_0001s15700	sp|P33560|TIP_ANTMA	Probable aquaporin TIP-type OS=Antirrhinum majus GN=DIP PE=2 SV=1	AT4G17340.1	| Symbols: TIP2;2, DELTA-TIP2 | tonoplast intrinsic protein 2;2 | chr4:9699318-9700250 FORWARD LENGTH=250	LOC_Os02g44080.1	protein|aquaporin protein, putative, expressed	IMGA|Medtr5g012810.1	Aquaporin TIP2-3 chr5 3671983-3673705 F EGN_Mt100125 20111014	GO:0000041|transition metal ion transport GO:0006810|transport GO:0006826|iron ion transport GO:0006833|water transport GO:0009651|response to salt stress GO:0010106|cellular response to iron ion starvation GO:0010167|response to nitrate GO:0010413|glucuronoxylan metabolic process GO:0015706|nitrate transport GO:0045492|xylan biosynthetic process GO:0055085|transmembrane transport	GO:0005215|transporter activity GO:0015200|methylammonium transmembrane transporter activity GO:0015250|water channel activity GO:0051739|ammonia transmembrane transporter activity	GO:0009705|plant-type vacuole membrane GO:0016020|membrane GO:0016021|integral to membrane GO:0042807|central vacuole
pt2_01632	A	A1S	Potri.001G157100	Potri.001G157100(AS)	POPTR_0001s15710	sp|Q9M644|LEP_ARATH	Ethylene-responsive transcription factor LEP OS=Arabidopsis thaliana GN=LEP PE=2 SV=1	AT5G13910.1	| Symbols: LEP | Integrase-type DNA-binding superfamily protein | chr5:4482450-4483085 REVERSE LENGTH=211	LOC_Os02g32040.1	protein|AP2 domain containing protein, expressed	IMGA|Medtr5g032820.1	AP2/ERF domain-containing transcription factor chr5 13732308-13733396 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009739|response to gibberellin stimulus GO:0010030|positive regulation of seed germination	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_01633	C	C1S	Potri.001G157200	Potri.001G157200(CS)	NA	NA	AT5G47380.1	| Symbols: | Protein of unknown function, DUF547 | chr5:19221472-19224471 REVERSE LENGTH=618	LOC_Os10g41040.2	protein|ternary complex factor MIP1, putative, expressed	IMGA|Medtr5g012790.1	hypothetical protein chr5 3663580-3658566 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01634	A	A1S	Potri.001G157200	Potri.001G157200(AS)	POPTR_0001s15730	NA	NA	AT5G47380.1	| Symbols: | Protein of unknown function, DUF547 | chr5:19221472-19224471 REVERSE LENGTH=618	LOC_Os10g41040.2	protein|ternary complex factor MIP1, putative, expressed	IMGA|Medtr5g012790.1	hypothetical protein chr5 3663580-3658566 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01635	A	A1S	Potri.001G157300	Potri.001G157300(AS)	POPTR_0001s15740	NA	NA	AT4G17330.1	| Symbols: ATG2484-1, G2484-1 | G2484-1 protein | chr4:9689263-9697172 REVERSE LENGTH=2037	LOC_Os10g41030.2	protein|agenet domain containing protein, putative, expressed	IMGA|Medtr5g012780.1	Agenet domain containing protein expressed chr5 3653978-3642566 E EGN_Mt100125 20111014	GO:0000226|microtubule cytoskeleton organization GO:0009630|gravitropism	GO:0003723|RNA binding	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_01636	A	A1S	Potri.001G157400	Potri.001G157400(AS)	POPTR_0001s15750	sp|Q8W486|Y1491_ARATH	DUF246 domain-containing protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=1 SV=1	AT4G16650.1	| Symbols: | O-fucosyltransferase family protein | chr4:9372727-9375910 FORWARD LENGTH=549	LOC_Os04g46570.1	protein|growth regulator related protein, putative, expressed	IMGA|Medtr5g012770.1	DUF246 domain-containing protein chr5 3636692-3641901 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0016757|transferase activity, transferring glycosyl groups	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_01637	B	B1S	Potri.001G157500	Potri.001G157500(BS)	POPTR_0001s15760	sp|P29136|MEP1_SOYBN	Metalloendoproteinase 1 OS=Glycine max PE=1 SV=2	AT2G45040.1	| Symbols: | Matrixin family protein | chr2:18577693-18578721 FORWARD LENGTH=342	LOC_Os10g40830.1	protein|metalloendoproteinase 1 precursor, putative, expressed	IMGA|Medtr5g012680.1	Matrix metalloproteinase-28 chr5 3608811-3607702 E EGN_Mt100125 20111014	GO:0006508|proteolysis GO:0008152|metabolic process	GO:0004222|metalloendopeptidase activity GO:0008237|metallopeptidase activity GO:0008270|zinc ion binding	GO:0005576|extracellular region GO:0031012|extracellular matrix GO:0031225|anchored to membrane
pt2_01638	G	G4	NA	NA	POPTR_0001s15770	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01639	C	C1S	Potri.001G157600	Potri.001G157600(CS)	sp|Q6J163|5NG4_PINTA	Auxin-induced protein 5NG4 OS=Pinus taeda PE=2 SV=1	AT5G47470.1	| Symbols: | Nodulin MtN21 /EamA-like transporter family protein | chr5:19254598-19256378 FORWARD LENGTH=364	LOC_Os06g01660.1	protein|integral membrane protein DUF6 domain containing protein, expressed	IMGA|Medtr5g012650.1	Auxin-induced protein 5NG4 chr5 3601951-3599934 H EGN_Mt100125 20111014	GO:0009827|plant-type cell wall modification GO:0009860|pollen tube growth	NA	GO:0016020|membrane
pt2_01640	A	A1S	Potri.001G157600	Potri.001G157600(AS)	POPTR_0001s15780	sp|Q6J163|5NG4_PINTA	Auxin-induced protein 5NG4 OS=Pinus taeda PE=2 SV=1	AT5G47470.1	| Symbols: | Nodulin MtN21 /EamA-like transporter family protein | chr5:19254598-19256378 FORWARD LENGTH=364	LOC_Os06g01660.1	protein|integral membrane protein DUF6 domain containing protein, expressed	IMGA|Medtr5g012650.1	Auxin-induced protein 5NG4 chr5 3601951-3599934 H EGN_Mt100125 20111014	GO:0009827|plant-type cell wall modification GO:0009860|pollen tube growth	NA	GO:0016020|membrane
pt2_01641	A	A1S	Potri.001G157600	Potri.001G157600(AS)	POPTR_0001s15780	sp|Q6J163|5NG4_PINTA	Auxin-induced protein 5NG4 OS=Pinus taeda PE=2 SV=1	AT5G47470.1	| Symbols: | Nodulin MtN21 /EamA-like transporter family protein | chr5:19254598-19256378 FORWARD LENGTH=364	LOC_Os06g01660.1	protein|integral membrane protein DUF6 domain containing protein, expressed	IMGA|Medtr5g012650.1	Auxin-induced protein 5NG4 chr5 3601951-3599934 H EGN_Mt100125 20111014	GO:0009827|plant-type cell wall modification GO:0009860|pollen tube growth	NA	GO:0016020|membrane
pt2_01642	C	C1S	Potri.001G157600	Potri.001G157600(CS)	sp|Q6J163|5NG4_PINTA	Auxin-induced protein 5NG4 OS=Pinus taeda PE=2 SV=1	AT5G47470.1	| Symbols: | Nodulin MtN21 /EamA-like transporter family protein | chr5:19254598-19256378 FORWARD LENGTH=364	LOC_Os06g01660.1	protein|integral membrane protein DUF6 domain containing protein, expressed	IMGA|Medtr5g012650.1	Auxin-induced protein 5NG4 chr5 3601951-3599934 H EGN_Mt100125 20111014	GO:0009827|plant-type cell wall modification GO:0009860|pollen tube growth	NA	GO:0016020|membrane
pt2_01643	A	A1S	Potri.001G157700	Potri.001G157700(AS)	POPTR_0001s15790	sp|Q9M202|ZAT9_ARATH	Zinc finger protein ZAT9 OS=Arabidopsis thaliana GN=ZAT9 PE=2 SV=1	AT3G60580.1	| Symbols: | C2H2-like zinc finger protein | chr3:22394007-22394873 FORWARD LENGTH=288	LOC_Os10g40660.1	protein|ZOS10-07 - C2H2 zinc finger protein, expressed	IMGA|Medtr5g012630.1	Cys2/His2 zinc-finger transcription factor chr5 3596403-3595615 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003676|nucleic acid binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_01644	A	A1S	Potri.001G157800	Potri.001G157800(AS)	POPTR_0001s15800	sp|Q75N33|SC16B_RAT	Protein transport protein Sec16B OS=Rattus norvegicus GN=Sec16b PE=2 SV=1	AT5G47490.1	| Symbols: | RGPR-related | chr5:19264675-19270487 FORWARD LENGTH=1361	LOC_Os02g01490.1	protein|expressed protein	IMGA|Medtr5g012620.1	COPII coat assembly protein sec16 chr5 3591458-3582315 E EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005634|nucleus
pt2_01645	A	A1S	Potri.001G157900	Potri.001G157900(AS)	POPTR_0001s15810	sp|Q94EI3|PE192_ARATH	Peroxisome biogenesis protein 19-2 OS=Arabidopsis thaliana GN=PEX19-2 PE=1 SV=1	AT5G17550.1	| Symbols: PEX19-2, AtPEX19-2 | peroxin 19-2 | chr5:5786743-5788166 REVERSE LENGTH=245	LOC_Os02g44220.1	protein|peroxisomal biogenesis factor 19, putative, expressed	NA	NA	GO:0007031|peroxisome organization	GO:0003674|molecular_function GO:0005515|protein binding GO:0042802|identical protein binding	GO:0005634|nucleus GO:0005777|peroxisome GO:0005829|cytosol
pt2_01646	A	A1S	Potri.001G158000	Potri.001G158000(AS)	POPTR_0001s15820	sp|F4JMI5|GUX7_ARATH	Putative glucuronosyltransferase PGSIP7 OS=Arabidopsis thaliana GN=PGSIP7 PE=3 SV=1	AT4G16600.1	| Symbols: | Nucleotide-diphospho-sugar transferases superfamily protein | chr4:9350039-9352707 FORWARD LENGTH=494	LOC_Os04g46750.1	protein|glycosyl transferase 8 domain containing protein, putative, expressed	IMGA|Medtr5g012590.1	(RAP Annotation release2) Glycosyl transferase chr5 3564563-3567940 H EGN_Mt100125 20111014	GO:0009058|biosynthetic process GO:0016051|carbohydrate biosynthetic process	GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups	GO:0005739|mitochondrion
pt2_01647	A	A1S	Potri.001G158100	Potri.001G158100(AS)	POPTR_0001s15830	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01648	A	A1S	Potri.001G158200	Potri.001G158200(AS)	POPTR_0001s15840	sp|Q39079|DNJ13_ARATH	Chaperone protein dnaJ 13 OS=Arabidopsis thaliana GN=ATJ13 PE=1 SV=2	AT2G35720.1	| Symbols: OWL1 | DNAJ heat shock N-terminal domain-containing protein | chr2:15016883-15019866 FORWARD LENGTH=538	LOC_Os10g36370.1	protein|heat shock protein DnaJ, putative, expressed	IMGA|Medtr5g012530.1	Chaperone protein dnaJ chr5 3532899-3522303 E EGN_Mt100125 20111014	GO:0006457|protein folding GO:0010228|vegetative to reproductive phase transition of meristem GO:0055122|response to very low light intensity stimulus	GO:0005515|protein binding GO:0031072|heat shock protein binding	GO:0009507|chloroplast GO:0009536|plastid
pt2_01649	A	A2S	Potri.001G158400	Potri.001G158400(AS) Potri.003G111400(DS)	POPTR_0001s15850	sp|P14009|14KD_DAUCA	14 kDa proline-rich protein DC2.15 OS=Daucus carota PE=2 SV=1	AT1G62510.1	| Symbols: | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr1:23136632-23137081 REVERSE LENGTH=149	LOC_Os03g01320.1	protein|LTPL116 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	IMGA|Medtr1g012700.1	14 kDa proline-rich protein DC2.15 chr1 3041200-3040682 E EGN_Mt100125 20111014	GO:0006869|lipid transport	GO:0008289|lipid binding	GO:0005576|extracellular region
pt2_01650	C	C1S	Potri.001G158500	Potri.001G158500(CS)	sp|Q944R7|ANM16_ARATH	Protein arginine N-methyltransferase 1.6 OS=Arabidopsis thaliana GN=PRMT16 PE=2 SV=2	AT4G16570.1	| Symbols: ATPRMT7, PRMT7 | protein arginine methyltransferase 7 | chr4:9336815-9340692 FORWARD LENGTH=724	LOC_Os06g01640.1	protein|arginine N-methyltransferase 7, putative, expressed	NA	NA	GO:0006479|protein methylation	GO:0008168|methyltransferase activity	GO:0009507|chloroplast
pt2_01651	A	A2S	Potri.001G158600	Potri.001G158600(AS) Potri.003G076300(DS)	POPTR_0001s15870	sp|Q766C3|NEP1_NEPGR	Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1	AT4G16563.1	| Symbols: | Eukaryotic aspartyl protease family protein | chr4:9329933-9331432 REVERSE LENGTH=499	LOC_Os04g45270.1	protein|aspartyl protease family protein, putative, expressed	IMGA|Medtr5g012490.1	Aspartic proteinase nepenthesin-2 chr5 3501681-3499802 F EGN_Mt100125 20111014	GO:0006508|proteolysis	GO:0004190|aspartic-type endopeptidase activity	GO:0005576|extracellular region GO:0009505|plant-type cell wall
pt2_01652	A	A1S	Potri.001G158700	Potri.001G158700(AS)	POPTR_0001s15880	sp|Q10137|SEC14_SCHPO	Sec14 cytosolic factor OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sec14 PE=2 SV=1	AT5G47510.1	| Symbols: | Sec14p-like phosphatidylinositol transfer family protein | chr5:19275048-19276999 FORWARD LENGTH=376	LOC_Os07g27310.1	protein|CRAL/TRIO domain containing protein, expressed	IMGA|Medtr5g012460.1	Sec14 cytosolic factor chr5 3489519-3486775 E EGN_Mt100125 20111014	GO:0006810|transport	GO:0005215|transporter activity	GO:0005575|cellular_component GO:0005886|plasma membrane
pt2_01653	A	A1S	Potri.001G158800	Potri.001G158800(AS)	POPTR_0001s15890	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process GO:0010089|xylem development GO:0044036|cell wall macromolecule metabolic process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01654	A	A1S	Potri.001G158900	Potri.001G158900(AS)	POPTR_0001s15900	sp|Q9S7J8|HMA7_ARATH	Copper-transporting ATPase RAN1 OS=Arabidopsis thaliana GN=RAN1 PE=1 SV=1	AT5G44790.1	| Symbols: RAN1, HMA7 | copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1) | chr5:18075846-18079817 REVERSE LENGTH=1001	LOC_Os06g45500.1	protein|copper-transporting ATPase, putative, expressed	IMGA|contig_52028_1.1	Copper transporting ATPase contig_52028 7242-460 E PREDN 20111014	GO:0000041|transition metal ion transport GO:0000303|response to superoxide GO:0006487|protein N-linked glycosylation GO:0006754|ATP biosynthetic process GO:0006812|cation transport GO:0006825|copper ion transport GO:0007165|signal transduction GO:0008152|metabolic process GO:0008219|cell death GO:0009723|response to ethylene stimulus GO:0009755|hormone-mediated signaling pathway GO:0009863|salicylic acid mediated signaling pathway GO:0009873|ethylene mediated signaling pathway GO:0010119|regulation of stomatal movement GO:0030001|metal ion transport GO:0046034|ATP metabolic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0005375|copper ion transmembrane transporter activity GO:0005507|copper ion binding GO:0005524|ATP binding GO:0015662|ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism GO:0016820|hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances GO:0043682|copper-transporting ATPase activity GO:0046872|metal ion binding	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0016020|membrane GO:0016021|integral to membrane
pt2_01655	A	A1S	Potri.001G159000	Potri.001G159000(AS)	POPTR_0001s15910	sp|O64764|TRXO1_ARATH	Thioredoxin O1, mitochondrial OS=Arabidopsis thaliana GN=At2g35010 PE=2 SV=1	AT2G35010.2	| Symbols: ATO1, TO1 | thioredoxin O1 | chr2:14754398-14755888 FORWARD LENGTH=194	LOC_Os06g45510.2	protein|thioredoxin, putative, expressed	IMGA|Medtr1g023140.1	Thioredoxin H-type chr1 7077093-7074970 F EGN_Mt100125 20111014	GO:0006662|glycerol ether metabolic process GO:0045454|cell redox homeostasis	GO:0009055|electron carrier activity GO:0015035|protein disulfide oxidoreductase activity GO:0016671|oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	GO:0005739|mitochondrion GO:0005759|mitochondrial matrix
pt2_01656	A	A1S	Potri.001G159000	Potri.001G159000(AS)	POPTR_0001s15910	sp|O64764|TRXO1_ARATH	Thioredoxin O1, mitochondrial OS=Arabidopsis thaliana GN=At2g35010 PE=2 SV=1	AT2G35010.2	| Symbols: ATO1, TO1 | thioredoxin O1 | chr2:14754398-14755888 FORWARD LENGTH=194	LOC_Os06g45510.2	protein|thioredoxin, putative, expressed	IMGA|Medtr1g023140.1	Thioredoxin H-type chr1 7077093-7074970 F EGN_Mt100125 20111014	GO:0006662|glycerol ether metabolic process GO:0045454|cell redox homeostasis	GO:0009055|electron carrier activity GO:0015035|protein disulfide oxidoreductase activity GO:0016671|oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	GO:0005739|mitochondrion GO:0005759|mitochondrial matrix
pt2_01657	A	A1S	Potri.001G159000	Potri.001G159000(AS)	POPTR_0001s15910	sp|O64764|TRXO1_ARATH	Thioredoxin O1, mitochondrial OS=Arabidopsis thaliana GN=At2g35010 PE=2 SV=1	AT2G35010.2	| Symbols: ATO1, TO1 | thioredoxin O1 | chr2:14754398-14755888 FORWARD LENGTH=194	LOC_Os06g45510.2	protein|thioredoxin, putative, expressed	IMGA|Medtr1g023140.1	Thioredoxin H-type chr1 7077093-7074970 F EGN_Mt100125 20111014	GO:0006662|glycerol ether metabolic process GO:0045454|cell redox homeostasis	GO:0009055|electron carrier activity GO:0015035|protein disulfide oxidoreductase activity GO:0016671|oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	GO:0005739|mitochondrion GO:0005759|mitochondrial matrix
pt2_01658	A	A1S	Potri.001G159200	Potri.001G159200(AS)	POPTR_0001s15920	NA	NA	AT1G31040.1	| Symbols: | PLATZ transcription factor family protein | chr1:11069793-11072182 REVERSE LENGTH=243	LOC_Os06g45540.1	protein|zinc-binding protein, putative, expressed	IMGA|Medtr5g007230.1	hypothetical protein chr5 1014435-1016598 F EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005739|mitochondrion
pt2_01659	A	A1S	Potri.001G159200	Potri.001G159200(AS)	POPTR_0001s15920	NA	NA	AT1G31040.1	| Symbols: | PLATZ transcription factor family protein | chr1:11069793-11072182 REVERSE LENGTH=243	LOC_Os06g45540.1	protein|zinc-binding protein, putative, expressed	IMGA|Medtr5g007230.1	hypothetical protein chr5 1014435-1016598 F EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005739|mitochondrion
pt2_01660	A	A1S	Potri.001G159300	Potri.001G159300(AS)	POPTR_0001s15930	sp|Q9FLC6|ATL73_ARATH	RING-H2 finger protein ATL73 OS=Arabidopsis thaliana GN=ATL73 PE=2 SV=1	AT5G05280.1	| Symbols: | RING/U-box superfamily protein | chr5:1565509-1566039 REVERSE LENGTH=176	LOC_Os06g45580.1	protein|RING-H2 finger protein, putative, expressed	IMGA|Medtr5g024730.1	Ring finger protein chr5 9683574-9684454 F EGN_Mt100125 20111014	NA	GO:0008270|zinc ion binding	NA
pt2_01661	A	A1S	Potri.001G159400	Potri.001G159400(AS)	POPTR_0001s15940	sp|Q9Y5K3|PCY1B_HUMAN	Choline-phosphate cytidylyltransferase B OS=Homo sapiens GN=PCYT1B PE=1 SV=1	AT2G32260.1	| Symbols: ATCCT1, CCT1 | phosphorylcholine cytidylyltransferase | chr2:13697645-13700241 FORWARD LENGTH=332	LOC_Os02g07720.2	protein|cytidylyltransferase domain containing protein, expressed	NA	NA	GO:0006656|phosphatidylcholine biosynthetic process GO:0008284|positive regulation of cell proliferation GO:0009058|biosynthetic process	GO:0003824|catalytic activity GO:0004105|choline-phosphate cytidylyltransferase activity GO:0016779|nucleotidyltransferase activity	GO:0005737|cytoplasm
pt2_01662	A	A1S	Potri.001G159500	Potri.001G159500(AS)	POPTR_0001s15960	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01663	A	A1S	Potri.001G159600	Potri.001G159600(AS)	POPTR_0001s15970	sp|A7HHM9|URED_ANADF	Urease accessory protein UreD OS=Anaeromyxobacter sp. (strain Fw109-5) GN=ureD PE=3 SV=1	AT2G35035.1	| Symbols: URED | urease accessory protein D | chr2:14763387-14765045 REVERSE LENGTH=294	LOC_Os02g07670.1	protein|URED, putative, expressed	NA	NA	GO:0006807|nitrogen compound metabolic process GO:0048554|positive regulation of metalloenzyme activity	GO:0016151|nickel cation binding	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_01664	A	A2S	Potri.001G159700	Potri.001G159700(AS) Potri.003G074700(BS)	POPTR_0001s15980	sp|O64765|UAP1_ARATH	Probable UDP-N-acetylglucosamine pyrophosphorylase OS=Arabidopsis thaliana GN=At2g35020 PE=2 SV=1	AT2G35020.1	| Symbols: GlcNAc1pUT2 | N-acetylglucosamine-1-phosphate uridylyltransferase 2 | chr2:14756803-14760477 FORWARD LENGTH=502	LOC_Os08g10600.1	protein|UTP--glucose-1-phosphate uridylyltransferase, putative, expressed	NA	NA	GO:0006011|UDP-glucose metabolic process GO:0006047|UDP-N-acetylglucosamine metabolic process GO:0008152|metabolic process GO:0019276|UDP-N-acetylgalactosamine metabolic process	GO:0003977|UDP-N-acetylglucosamine diphosphorylase activity GO:0003983|UTP:glucose-1-phosphate uridylyltransferase activity GO:0016779|nucleotidyltransferase activity GO:0052630|UDP-N-acetylgalactosamine diphosphorylase activity	GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane
pt2_01665	A	A1S	Potri.001G159900	Potri.001G159900(AS)	POPTR_0001s15990	sp|O49432|QRT3_ARATH	Polygalacturonase QRT3 OS=Arabidopsis thaliana GN=QRT3 PE=2 SV=1	AT4G20050.2	| Symbols: QRT3 | Pectin lyase-like superfamily protein | chr4:10849911-10852090 REVERSE LENGTH=481	LOC_Os04g52320.1	protein|QRT3, putative, expressed	NA	NA	GO:0009556|microsporogenesis GO:0009827|plant-type cell wall modification GO:0009860|pollen tube growth GO:0010584|pollen exine formation	GO:0004650|polygalacturonase activity	GO:0005576|extracellular region
pt2_01666	A	A1S	Potri.001G160000	Potri.001G160000(AS)	POPTR_0001s16000	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01667	A	A1S	Potri.001G160100	Potri.001G160100(AS)	POPTR_0001s16010	sp|O49434|AAH_ARATH	Allantoate deiminase, chloroplastic OS=Arabidopsis thaliana GN=AAH PE=1 SV=2	AT4G20070.1	| Symbols: ATAAH, AAH | allantoate amidohydrolase | chr4:10861548-10864529 FORWARD LENGTH=525	LOC_Os06g45480.1	protein|hydrolase, putative, expressed	NA	NA	GO:0006508|proteolysis GO:0008152|metabolic process GO:0010136|ureide catabolic process GO:0015996|chlorophyll catabolic process	GO:0008237|metallopeptidase activity GO:0016787|hydrolase activity GO:0016813|hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines GO:0047652|allantoate deiminase activity	GO:0005783|endoplasmic reticulum GO:0009507|chloroplast
pt2_01668	B	B1S	Potri.001G160200	Potri.001G160200(BS)	POPTR_0001s16020	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01669	A	A1S	Potri.001G160300	Potri.001G160300(AS)	POPTR_0001s16030	sp|Q9C823|Y1523_ARATH	C-type lectin receptor-like tyrosine-protein kinase At1g52310 OS=Arabidopsis thaliana GN=At1g52310 PE=2 SV=1	AT1G52310.1	| Symbols: | protein kinase family protein / C-type lectin domain-containing protein | chr1:19478401-19480462 FORWARD LENGTH=552	LOC_Os01g01410.1	protein|TKL_IRAK_C-LEC.1 - TKL_IRAK_C-LEC has homology to C-type lectin receptors, expressed	IMGA|Medtr5g092120.1	Serine/threonine protein kinase chr5 39187993-39185584 F EGN_Mt100125 20111014	GO:0006346|methylation-dependent chromatin silencing GO:0006468|protein phosphorylation GO:0007267|cell-cell signaling GO:0009616|virus induced gene silencing GO:0009855|determination of bilateral symmetry GO:0009887|organ morphogenesis GO:0010014|meristem initiation GO:0010048|vernalization response GO:0010050|vegetative phase change GO:0010051|xylem and phloem pattern formation GO:0010073|meristem maintenance GO:0010267|production of ta-siRNAs involved in RNA interference GO:0016246|RNA interference GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0048439|flower morphogenesis GO:0048519|negative regulation of biological process	GO:0004672|protein kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_01670	A	A1S	Potri.001G160400	Potri.001G160400(AS)	POPTR_0001s16050	sp|O81123|ZIP1_ARATH	Zinc transporter 1 OS=Arabidopsis thaliana GN=ZIP1 PE=2 SV=1	AT3G12750.1	| Symbols: ZIP1 | zinc transporter 1 precursor | chr3:4051950-4053156 REVERSE LENGTH=355	LOC_Os05g39560.1	protein|metal cation transporter, putative, expressed	IMGA|AC233671_3.1	Zinc transporter AC233671.1 10745-8190 E EGN_Mt100125 20111014	GO:0006826|iron ion transport GO:0006829|zinc ion transport GO:0006833|water transport GO:0010043|response to zinc ion GO:0010106|cellular response to iron ion starvation GO:0030001|metal ion transport GO:0055085|transmembrane transport GO:0071577|zinc ion transmembrane transport	GO:0005385|zinc ion transmembrane transporter activity GO:0046873|metal ion transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_01671	A	A1S	Potri.001G160500	Potri.001G160500(AS)	POPTR_0001s16060	NA	NA	AT1G05780.1	| Symbols: | Vacuolar ATPase assembly integral membrane protein VMA21-like domain | chr1:1726761-1728180 FORWARD LENGTH=106	LOC_Os04g52300.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_01672	A	A1S	Potri.001G160600	Potri.001G160600(AS)	POPTR_0001s16070	sp|Q54M40|PIGC_DICDI	Putative phosphatidylinositol N-acetylglucosaminyltransferase subunit C OS=Dictyostelium discoideum GN=pigC PE=3 SV=1	AT2G34980.1	| Symbols: SETH1 | phosphatidylinositolglycan synthase family protein | chr2:14748967-14749878 FORWARD LENGTH=303	LOC_Os02g40870.2	protein|phosphatidylinositol N-acetylglucosaminyltransferase subunit C, putative, expressed	NA	NA	GO:0006506|GPI anchor biosynthetic process GO:0009846|pollen germination GO:0009860|pollen tube growth GO:0016126|sterol biosynthetic process GO:0046520|sphingoid biosynthetic process	GO:0016740|transferase activity GO:0017176|phosphatidylinositol N-acetylglucosaminyltransferase activity	GO:0000506|glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex GO:0016020|membrane GO:0016021|integral to membrane
pt2_01673	A	A1S	Potri.001G160700	Potri.001G160700(AS)	POPTR_0001s16080	sp|O43670|ZN207_HUMAN	Zinc finger protein 207 OS=Homo sapiens GN=ZNF207 PE=1 SV=1	AT1G30970.1	| Symbols: SUF4 | zinc finger (C2H2 type) family protein | chr1:11040613-11043593 REVERSE LENGTH=367	LOC_Os09g38790.2	protein|ZOS9-19 - C2H2 zinc finger protein, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0009910|negative regulation of flower development GO:0051568|histone H3-K4 methylation	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0008270|zinc ion binding GO:0042803|protein homodimerization activity GO:0046982|protein heterodimerization activity	GO:0005622|intracellular GO:0005634|nucleus
pt2_01674	A	A2S	Potri.001G160700	Potri.001G160700(AS) Potri.003G074200(DS)	POPTR_0001s16080	sp|O43670|ZN207_HUMAN	Zinc finger protein 207 OS=Homo sapiens GN=ZNF207 PE=1 SV=1	AT1G30970.1	| Symbols: SUF4 | zinc finger (C2H2 type) family protein | chr1:11040613-11043593 REVERSE LENGTH=367	LOC_Os09g38790.2	protein|ZOS9-19 - C2H2 zinc finger protein, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0009910|negative regulation of flower development GO:0051568|histone H3-K4 methylation	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0008270|zinc ion binding GO:0042803|protein homodimerization activity GO:0046982|protein heterodimerization activity	GO:0005622|intracellular GO:0005634|nucleus
pt2_01675	A	A1S	Potri.001G160700	Potri.001G160700(AS)	POPTR_0001s16080	sp|O43670|ZN207_HUMAN	Zinc finger protein 207 OS=Homo sapiens GN=ZNF207 PE=1 SV=1	AT1G30970.1	| Symbols: SUF4 | zinc finger (C2H2 type) family protein | chr1:11040613-11043593 REVERSE LENGTH=367	LOC_Os09g38790.2	protein|ZOS9-19 - C2H2 zinc finger protein, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0009910|negative regulation of flower development GO:0051568|histone H3-K4 methylation	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0008270|zinc ion binding GO:0042803|protein homodimerization activity GO:0046982|protein heterodimerization activity	GO:0005622|intracellular GO:0005634|nucleus
pt2_01676	A	A1S	Potri.001G160800	Potri.001G160800(AS)	POPTR_0001s16090	sp|O82653|ERG_ARATH	GTP-binding protein ERG OS=Arabidopsis thaliana GN=ERG PE=1 SV=2	AT1G30960.1	| Symbols: | GTP-binding family protein | chr1:11037755-11039977 REVERSE LENGTH=437	LOC_Os08g10649.1	protein|GTPase of unknown function domain containing protein, putative, expressed	IMGA|Medtr5g020440.1	GTP-binding protein ERG chr5 7552242-7545808 E EGN_Mt100125 20111014	GO:0006897|endocytosis	GO:0003723|RNA binding GO:0005525|GTP binding	GO:0005622|intracellular GO:0005829|cytosol GO:0009507|chloroplast
pt2_01677	A	A1S	Potri.001G160900	Potri.001G160900(AS)	POPTR_0001s16100	sp|Q39090|UFO_ARATH	Protein UNUSUAL FLORAL ORGANS OS=Arabidopsis thaliana GN=UFO PE=1 SV=2	AT1G30950.1	| Symbols: UFO | F-box family protein | chr1:11036180-11037508 FORWARD LENGTH=442	LOC_Os06g45460.1	protein|OsFBX202 - F-box domain containing protein, expressed	IMGA|Medtr1g018140.1	F-box/kelch-repeat protein chr1 5321626-5322774 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006511|ubiquitin-dependent protein catabolic process GO:0009933|meristem structural organization GO:0031146|SCF-dependent proteasomal ubiquitin-dependent protein catabolic process GO:0042752|regulation of circadian rhythm	GO:0004842|ubiquitin-protein ligase activity GO:0005515|protein binding GO:0008134|transcription factor binding	GO:0000151|ubiquitin ligase complex GO:0005634|nucleus
pt2_01678	A	A1S	Potri.001G161000	Potri.001G161000(AS)	POPTR_0001s16110	sp|Q9C7S5|PSYR1_ARATH	Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana GN=PSYR1 PE=2 SV=1	AT1G72300.1	| Symbols: | Leucine-rich receptor-like protein kinase family protein | chr1:27217679-27220966 REVERSE LENGTH=1095	LOC_Os02g05930.1	protein|phytosulfokine receptor precursor, putative, expressed	IMGA|contig_56175_1.1	Receptor-like kinase contig_56175 3846-740 E PREDN 20111014	GO:0006468|protein phosphorylation GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway GO:0009611|response to wounding GO:0031347|regulation of defense response	GO:0001653|peptide receptor activity GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0004888|transmembrane signaling receptor activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005575|cellular_component GO:0005886|plasma membrane
pt2_01679	A	A1S	Potri.001G161100	Potri.001G161100(AS)	POPTR_0001s16120	sp|Q9UUH0|YKIC_SCHPO	Uncharacterized protein C630.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC630.12 PE=2 SV=1	AT1G53710.1	| Symbols: | Calcineurin-like metallo-phosphoesterase superfamily protein | chr1:20053339-20056271 REVERSE LENGTH=528	LOC_Os03g27950.1	protein|Ser/Thr protein phosphatase family protein, putative, expressed	NA	NA	GO:0006816|calcium ion transport GO:0006882|cellular zinc ion homeostasis GO:0009624|response to nematode	GO:0004722|protein serine/threonine phosphatase activity GO:0016787|hydrolase activity	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_01680	A	A2S	Potri.001G161200	Potri.001G161200(AS) Potri.003G073900(DS)	POPTR_0001s16130	NA	NA	AT1G53708.1	| Symbols: RTFL9 | ROTUNDIFOLIA like 9 | chr1:20052530-20053032 FORWARD LENGTH=109	NA	NA	NA	NA	NA	NA	GO:0005739|mitochondrion
pt2_01681	A	A1S	Potri.001G161300	Potri.001G161300(AS)	POPTR_0001s16140	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01682	A	A1S	Potri.001G161400	Potri.001G161400(AS)	POPTR_0001s16150	sp|Q43128|PMA10_ARATH	ATPase 10, plasma membrane-type OS=Arabidopsis thaliana GN=AHA10 PE=2 SV=2	AT1G17260.1	| Symbols: AHA10 | autoinhibited H(+)-ATPase isoform 10 | chr1:5904058-5908898 FORWARD LENGTH=947	LOC_Os03g08560.1	protein|plasma membrane ATPase, putative, expressed	IMGA|contig_93597_1.1	H-ATPase contig_93597 548-3166 H PREDN 20111014	GO:0006200|ATP catabolic process GO:0006754|ATP biosynthetic process GO:0006812|cation transport GO:0007033|vacuole organization GO:0007035|vacuolar acidification GO:0008152|metabolic process GO:0010023|proanthocyanidin biosynthetic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0005524|ATP binding GO:0015662|ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism GO:0016887|ATPase activity GO:0019829|cation-transporting ATPase activity GO:0046872|metal ion binding	GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0009507|chloroplast GO:0016020|membrane GO:0016021|integral to membrane
pt2_01683	A	A1S	Potri.001G161500	Potri.001G161500(AS)	POPTR_0001s16160	NA	NA	AT3G14360.1	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr3:4791596-4793534 FORWARD LENGTH=518	LOC_Os02g52830.1	protein|lipase, putative, expressed	IMGA|Medtr1g019270.1	Feruloyl esterase A chr1 5930369-5933464 E EGN_Mt100125 20111014	GO:0006629|lipid metabolic process	GO:0004806|triglyceride lipase activity	GO:0009507|chloroplast
pt2_01684	A	A2S	Potri.001G161600	Potri.001G161600(AS) Potri.003G073700(DS)	POPTR_0001s16170	sp|Q9C8M9|SRF6_ARATH	Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana GN=SRF6 PE=1 SV=1	AT1G53730.1	| Symbols: SRF6 | STRUBBELIG-receptor family 6 | chr1:20061771-20065475 FORWARD LENGTH=719	LOC_Os10g25090.1	protein|STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed	IMGA|Medtr1g116520.1	Protein kinase Pti1 chr1 33928497-33933789 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005576|extracellular region GO:0005886|plasma membrane
pt2_01685	A	A1S	Potri.001G161700	Potri.001G161700(AS)	POPTR_0001s16180	sp|Q9SSB5|PRS7A_ARATH	26S protease regulatory subunit 7 homolog A OS=Arabidopsis thaliana GN=RPT1A PE=2 SV=1	AT1G53750.1	| Symbols: RPT1A | regulatory particle triple-A 1A | chr1:20065921-20068324 REVERSE LENGTH=426	LOC_Os06g09290.1	protein|26S protease regulatory subunit 7, putative, expressed	IMGA|Medtr1g083330.1	26S protease regulatory subunit 6A-like protein chr1 21592984-21597408 F EGN_Mt100125 20111014	GO:0006511|ubiquitin-dependent protein catabolic process GO:0030163|protein catabolic process	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016787|hydrolase activity GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity	GO:0000502|proteasome complex GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane GO:0008540|proteasome regulatory particle, base subcomplex
pt2_01686	A	A1S	Potri.001G161800	Potri.001G161800(AS)	POPTR_0001s16190	NA	NA	AT1G53760.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plasma membrane, plastid, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2343 (InterPro:IPR018786); Has 171 Blast hits to 171 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 127; Plants - 41; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). | chr1:20069159-20070918 REVERSE LENGTH=272	LOC_Os02g05870.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0005774|vacuolar membrane GO:0009536|plastid GO:0016020|membrane
pt2_01687	A	A1S	Potri.001G161900	Potri.001G161900(AS)	POPTR_0001s16200	NA	NA	AT1G53800.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53250.1); Has 1136 Blast hits to 882 proteins in 242 species: Archae - 2; Bacteria - 216; Metazoa - 257; Fungi - 77; Plants - 87; Viruses - 4; Other Eukaryotes - 493 (source: NCBI BLink). | chr1:20081888-20084320 FORWARD LENGTH=568	LOC_Os10g12354.1	protein|endonuclease, putative, expressed	NA	NA	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005886|plasma membrane
pt2_01688	A	A2S	Potri.001G162000	Potri.001G162000(AS) Potri.003G073300(DS)	POPTR_0001s16210	sp|P0C035|ATL60_ARATH	RING-H2 finger protein ATL60 OS=Arabidopsis thaliana GN=ATL60 PE=2 SV=1	AT1G53820.1	| Symbols: | RING/U-box superfamily protein | chr1:20091491-20092423 FORWARD LENGTH=310	LOC_Os06g09310.1	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr5g071930.1	RING-H2 zinc finger protein chr5 29601190-29602541 I EGN_Mt100125 20111014	NA	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_01689	A	A1S	Potri.001G162100	Potri.001G162100(AS)	POPTR_0001s16220	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_01690	A	A1S	Potri.001G162200	Potri.001G162200(AS)	POPTR_0001s16230	sp|Q9FK29|UBC33_ARATH	Probable ubiquitin-conjugating enzyme E2 33 OS=Arabidopsis thaliana GN=UBC33 PE=2 SV=1	AT5G50430.2	| Symbols: UBC33 | ubiquitin-conjugating enzyme 33 | chr5:20534366-20536307 REVERSE LENGTH=243	LOC_Os06g09330.1	protein|ubiquitin-conjugating enzyme, putative, expressed	IMGA|Medtr5g075580.1	Ubiquitin carrier protein chr5 31157779-31152864 E EGN_Mt100125 20111014	NA	GO:0004842|ubiquitin-protein ligase activity GO:0016881|acid-amino acid ligase activity	GO:0005575|cellular_component
pt2_01691	A	A1S	Potri.001G162300	Potri.001G162300(AS)	POPTR_0001s16240	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_01692	A	A1S	Potri.001G162400	Potri.001G162400(AS)	POPTR_0001s16250	sp|P83948|PME3_CITSI	Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1	AT3G14310.1	| Symbols: ATPME3, PME3 | pectin methylesterase 3 | chr3:4772214-4775095 REVERSE LENGTH=592	LOC_Os07g47830.1	protein|pectinesterase, putative, expressed	IMGA|Medtr1g008140.1	Pectinesterase chr1 1318675-1315083 E EGN_Mt100125 20111014	GO:0006546|glycine catabolic process GO:0006569|tryptophan catabolic process GO:0009624|response to nematode GO:0009684|indoleacetic acid biosynthetic process GO:0042545|cell wall modification	GO:0004857|enzyme inhibitor activity GO:0030599|pectinesterase activity	GO:0005618|cell wall GO:0005737|cytoplasm GO:0005886|plasma membrane GO:0048046|apoplast
pt2_01693	A	A2S	Potri.001G162600	Potri.001G162600(AS) Potri.001G162500(AS)	POPTR_0001s16270	sp|P83948|PME3_CITSI	Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1	AT3G14310.1	| Symbols: ATPME3, PME3 | pectin methylesterase 3 | chr3:4772214-4775095 REVERSE LENGTH=592	LOC_Os01g21034.1	protein|pectinesterase, putative, expressed	IMGA|Medtr1g008140.1	Pectinesterase chr1 1318675-1315083 E EGN_Mt100125 20111014	GO:0006546|glycine catabolic process GO:0006569|tryptophan catabolic process GO:0009624|response to nematode GO:0009684|indoleacetic acid biosynthetic process GO:0042545|cell wall modification	GO:0004857|enzyme inhibitor activity GO:0030599|pectinesterase activity	GO:0005618|cell wall GO:0005737|cytoplasm GO:0005886|plasma membrane GO:0048046|apoplast
pt2_01694	A	A1S	Potri.001G162700	Potri.001G162700(AS)	POPTR_0001s16291	sp|Q43867|PME1_ARATH	Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 PE=2 SV=1	AT1G53840.1	| Symbols: ATPME1, PME1 | pectin methylesterase 1 | chr1:20101533-20103458 FORWARD LENGTH=586	LOC_Os01g13320.1	protein|pectinesterase, putative, expressed	IMGA|Medtr1g008140.1	Pectinesterase chr1 1318675-1315083 E EGN_Mt100125 20111014	GO:0042545|cell wall modification	GO:0004857|enzyme inhibitor activity GO:0030599|pectinesterase activity	GO:0005576|extracellular region GO:0005618|cell wall GO:0005634|nucleus GO:0005768|endosome GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0005886|plasma membrane GO:0009505|plant-type cell wall GO:0009506|plasmodesma GO:0016020|membrane
pt2_01695	A	A1S	Potri.001G162800	Potri.001G162800(AS)	POPTR_0001s16300	sp|Q9LDV4|ALAT2_ARATH	Alanine aminotransferase 2, mitochondrial OS=Arabidopsis thaliana GN=ALAAT2 PE=2 SV=1	AT1G72330.1	| Symbols: ALAAT2 | alanine aminotransferase 2 | chr1:27233637-27236571 FORWARD LENGTH=540	LOC_Os07g42600.1	protein|aminotransferase, classes I and II, domain containing protein, expressed	IMGA|Medtr5g033230.1	Alanine aminotransferase chr5 13910723-13904360 F EGN_Mt100125 20111014	GO:0001666|response to hypoxia GO:0009058|biosynthetic process GO:0042218|1-aminocyclopropane-1-carboxylate biosynthetic process	GO:0003824|catalytic activity GO:0004021|L-alanine:2-oxoglutarate aminotransferase activity GO:0005507|copper ion binding GO:0005524|ATP binding GO:0016740|transferase activity GO:0016847|1-aminocyclopropane-1-carboxylate synthase activity GO:0030170|pyridoxal phosphate binding	GO:0005739|mitochondrion
pt2_01696	A	A2S	Potri.001G162900	Potri.001G162900(AS) Potri.003G072500(DS)	POPTR_0001s16310	sp|Q9M4T8|PSA5_SOYBN	Proteasome subunit alpha type-5 OS=Glycine max GN=PAE1 PE=2 SV=1	AT3G14290.1	| Symbols: PAE2 | 20S proteasome alpha subunit E2 | chr3:4764364-4766381 FORWARD LENGTH=237	LOC_Os11g40140.1	protein|peptidase, T1 family, putative, expressed	IMGA|Medtr5g016590.1	Proteasome subunit alpha type chr5 5705647-5708295 F EGN_Mt100125 20111014	GO:0006511|ubiquitin-dependent protein catabolic process GO:0006635|fatty acid beta-oxidation GO:0009853|photorespiration GO:0051603|proteolysis involved in cellular protein catabolic process	GO:0004175|endopeptidase activity GO:0004298|threonine-type endopeptidase activity GO:0004540|ribonuclease activity GO:0008233|peptidase activity	GO:0000502|proteasome complex GO:0005737|cytoplasm GO:0005829|cytosol GO:0005839|proteasome core complex GO:0019773|proteasome core complex, alpha-subunit complex GO:0022626|cytosolic ribosome
pt2_01697	A	A1S	Potri.001G163000	Potri.001G163000(AS)	POPTR_0001s16320	NA	NA	AT1G53860.1	| Symbols: | Remorin family protein | chr1:20107165-20109458 REVERSE LENGTH=442	LOC_Os11g40210.1	protein|remorin C-terminal domain containing protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003677|DNA binding	GO:0005575|cellular_component
pt2_01698	A	A1S	Potri.001G163100	Potri.001G163100(AS)	POPTR_0001s16330	NA	NA	AT3G14280.1	| Symbols: | unknown protein; Has 51 Blast hits to 51 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:4761654-4762286 REVERSE LENGTH=141	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_01699	G	G1	NA	NA	POPTR_0001s16340	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01700	A	A1S	Potri.001G163200	Potri.001G163200(AS)	POPTR_0001s16350	sp|P34756|FAB1_YEAST	1-phosphatidylinositol 3-phosphate 5-kinase FAB1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FAB1 PE=1 SV=3	AT3G14270.1	| Symbols: FAB1B | phosphatidylinositol-4-phosphate 5-kinase family protein | chr3:4754624-4761185 FORWARD LENGTH=1791	LOC_Os08g34950.1	protein|chaperonin Cpn60/TCP-1, putative, expressed	NA	NA	GO:0007033|vacuole organization GO:0007165|signal transduction GO:0009555|pollen development GO:0010256|endomembrane system organization GO:0044267|cellular protein metabolic process GO:0046488|phosphatidylinositol metabolic process	GO:0000285|1-phosphatidylinositol-3-phosphate 5-kinase activity GO:0005524|ATP binding GO:0008270|zinc ion binding GO:0016307|phosphatidylinositol phosphate kinase activity GO:0016308|1-phosphatidylinositol-4-phosphate 5-kinase activity GO:0035091|phosphatidylinositol binding GO:0046872|metal ion binding	GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0005768|endosome
pt2_01701	A	A1S	Potri.001G163300	Potri.001G163300(AS)	POPTR_0001s16360	sp|Q54I81|EI2BA_DICDI	Translation initiation factor eIF-2B subunit alpha OS=Dictyostelium discoideum GN=eif2b1 PE=3 SV=1	AT1G53900.1	| Symbols: | Eukaryotic translation initiation factor 2B (eIF-2B) family protein | chr1:20127634-20130834 FORWARD LENGTH=580	LOC_Os12g31380.1	protein|initiation factor 2 subunit family domain containing protein, expressed	IMGA|Medtr5g031790.1	Translation initiation factor eIF-2B subunit beta chr5 13213079-13204458 E EGN_Mt100125 20111014	GO:0006413|translational initiation GO:0006446|regulation of translational initiation GO:0044237|cellular metabolic process GO:0050790|regulation of catalytic activity	GO:0003743|translation initiation factor activity GO:0005085|guanyl-nucleotide exchange factor activity GO:0005525|GTP binding	GO:0005851|eukaryotic translation initiation factor 2B complex
pt2_01702	A	A1S	Potri.001G163400	Potri.001G163400(AS)	POPTR_0001s16370	NA	NA	AT1G53903.1	| Symbols: | Protein of unknown function (DUF581) | chr1:20132363-20132842 FORWARD LENGTH=126	LOC_Os09g26370.1	protein|DUF581 domain containing protein, expressed	NA	NA	NA	NA	GO:0005739|mitochondrion
pt2_01703	A	A3S	Potri.001G163500	Potri.001G163500(AS) Potri.002G192300(BS) Potri.014G117800(DS)	POPTR_0001s16380	NA	NA	NA	NA	NA	NA	NA	NA	GO:0007267|cell-cell signaling GO:0007389|pattern specification process GO:0008150|biological_process GO:0009616|virus induced gene silencing GO:0009855|determination of bilateral symmetry GO:0009887|organ morphogenesis GO:0009944|polarity specification of adaxial/abaxial axis GO:0010014|meristem initiation GO:0010050|vegetative phase change GO:0010051|xylem and phloem pattern formation GO:0010073|meristem maintenance GO:0010267|production of ta-siRNAs involved in RNA interference GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0048438|floral whorl development GO:0048439|flower morphogenesis GO:0048451|petal formation GO:0048453|sepal formation GO:0048519|negative regulation of biological process	GO:0003723|RNA binding	GO:0005634|nucleus
pt2_01704	A	A1S	Potri.001G163600	Potri.001G163600(AS)	POPTR_0001s16390	sp|O65351|SUBL_ARATH	Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1	AT3G14240.1	| Symbols: | Subtilase family protein | chr3:4741637-4743964 REVERSE LENGTH=775	LOC_Os08g35090.1	protein|OsSub56 - Putative Subtilisin homologue, expressed	IMGA|Medtr5g016120.1	Subtilisin-like protease chr5 5470271-5467977 H EGN_Mt100125 20111014	GO:0006508|proteolysis GO:0008152|metabolic process GO:0043086|negative regulation of catalytic activity	GO:0004252|serine-type endopeptidase activity GO:0042802|identical protein binding	GO:0005618|cell wall
pt2_01705	A	A1S	Potri.001G163700	Potri.001G163700(AS)	POPTR_0001s16400	sp|Q9SSA8|RA212_ARATH	Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana GN=RAP2-12 PE=2 SV=1	AT1G53910.2	| Symbols: RAP2.12 | related to AP2 12 | chr1:20135242-20136581 FORWARD LENGTH=358	LOC_Os06g09390.2	protein|AP2 domain containing protein, expressed	IMGA|Medtr1g087920.1	Ethylene responsive transcription factor 2b chr1 23755953-23757256 E EGN_Mt100125 20111014	GO:0001666|response to hypoxia GO:0006355|regulation of transcription, DNA-dependent GO:0070483|detection of hypoxia	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_01706	A	A1S	Potri.001G163800	Potri.001G163800(AS)	POPTR_0001s16410	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005886|plasma membrane
pt2_01707	A	A2S	Potri.001G163900	Potri.001G163900(AS) Potri.001G164000(AA)	POPTR_0001s16420	sp|Q91WF7|FIG4_MOUSE	Polyphosphoinositide phosphatase OS=Mus musculus GN=Fig4 PE=1 SV=1	AT3G14205.1	| Symbols: | Phosphoinositide phosphatase family protein | chr3:4716008-4720524 REVERSE LENGTH=808	LOC_Os03g08430.2	protein|SAC domain containing protein, putative, expressed	IMGA|Medtr5g023960.2	Phosphatidylinositide phosphatase SAC1 chr5 9304037-9313858 F EGN_Mt100125 20111014	GO:0032957|inositol trisphosphate metabolic process GO:0046855|inositol phosphate dephosphorylation	GO:0004439|phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity GO:0042578|phosphoric ester hydrolase activity	GO:0005634|nucleus
pt2_01708	A	A2S	Potri.001G164000	Potri.001G164000(AS) Potri.003G071200(DS)	POPTR_0001s16430	sp|O80377|RSSA_DAUCA	40S ribosomal protein SA OS=Daucus carota GN=179B PE=2 SV=1	AT1G72370.2	| Symbols: P40, AP40, RP40, RPSAA | 40s ribosomal protein SA | chr1:27243148-27244842 REVERSE LENGTH=294	LOC_Os03g08440.2	protein|ribosomal protein S2, putative, expressed	NA	NA	GO:0000028|ribosomal small subunit assembly GO:0000447|endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0000461|endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0001510|RNA methylation GO:0006096|glycolysis GO:0006407|rRNA export from nucleus GO:0006412|translation GO:0006833|water transport GO:0006970|response to osmotic stress GO:0006972|hyperosmotic response GO:0007030|Golgi organization GO:0009266|response to temperature stimulus GO:0009651|response to salt stress GO:0009664|plant-type cell wall organization GO:0042256|mature ribosome assembly GO:0042545|cell wall modification GO:0046686|response to cadmium ion	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol GO:0005840|ribosome GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0009507|chloroplast GO:0015935|small ribosomal subunit GO:0016020|membrane GO:0022626|cytosolic ribosome GO:0022627|cytosolic small ribosomal subunit GO:0030686|90S preribosome
pt2_01709	A	A1S	Potri.001G164100	Potri.001G164100(AS)	POPTR_0001s16440	sp|Q03701|CEBPZ_HUMAN	CCAAT/enhancer-binding protein zeta OS=Homo sapiens GN=CEBPZ PE=1 SV=3	AT1G72440.1	| Symbols: EDA25, SWA2 | CCAAT-binding factor | chr1:27268325-27273596 REVERSE LENGTH=1043	LOC_Os09g02810.1	protein|CCAAT/enhancer-binding protein, putative, expressed	IMGA|Medtr5g019130.1	CCAAT/enhancer-binding protein zeta chr5 6968817-6976475 E EGN_Mt100125 20111014	GO:0009553|embryo sac development GO:0010197|polar nucleus fusion	NA	GO:0005634|nucleus GO:0005730|nucleolus
pt2_01710	A	A1S	Potri.001G164200	Potri.001G164200(AS)	POPTR_0001s16450	sp|Q9SYG1|HS174_ARATH	17.4 kDa class III heat shock protein OS=Arabidopsis thaliana GN=HSP17.4B PE=2 SV=1	AT1G54050.1	| Symbols: | HSP20-like chaperones superfamily protein | chr1:20179558-20180122 REVERSE LENGTH=155	LOC_Os02g54140.1	protein|hsp20/alpha crystallin family protein, putative, expressed	NA	NA	GO:0006457|protein folding GO:0009408|response to heat GO:0009644|response to high light intensity GO:0042542|response to hydrogen peroxide	GO:0003674|molecular_function	GO:0005737|cytoplasm
pt2_01711	A	A1S	Potri.001G164300	Potri.001G164300(AS)	POPTR_0001s16460	NA	NA	AT1G72430.1	| Symbols: | SAUR-like auxin-responsive protein family | chr1:27265150-27265509 REVERSE LENGTH=119	LOC_Os08g35110.1	protein|OsSAUR33 - Auxin-responsive SAUR gene family member, expressed	IMGA|contig_165881_1.1	SAUR33-auxin-responsive SAUR family member contig_165881 483-893 E PREDN 20111014	GO:0009733|response to auxin stimulus GO:0016126|sterol biosynthetic process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_01712	A	A1S	Potri.001G164400	Potri.001G164400(AS)	POPTR_0001s16470	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01713	A	A1S	Potri.001G164500	Potri.001G164500(AS)	POPTR_0001s16480	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process GO:0009736|cytokinin mediated signaling pathway	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_01714	B	B1S	Potri.001G164600	Potri.001G164600(BS)	POPTR_0001s16490	NA	NA	NA	NA	LOC_Os02g24280.1	protein|transposon protein, putative, unclassified, expressed	NA	NA	GO:0008150|biological_process	GO:0008270|zinc ion binding	GO:0005575|cellular_component
pt2_01715	A	A1S	Potri.001G164700	Potri.001G164700(AS)	POPTR_0001s16500	sp|O35723|DNJB3_MOUSE	DnaJ homolog subfamily B member 3 OS=Mus musculus GN=Dnajb3 PE=2 SV=1	AT3G14200.1	| Symbols: | Chaperone DnaJ-domain superfamily protein | chr3:4712881-4714361 REVERSE LENGTH=230	LOC_Os02g54130.2	protein|heat shock protein DnaJ, putative, expressed	IMGA|Medtr5g037880.1	DnaJ homolog subfamily B member chr5 16131554-16134251 F EGN_Mt100125 20111014	GO:0006457|protein folding	GO:0031072|heat shock protein binding	GO:0005575|cellular_component
pt2_01716	A	A1S	Potri.001G164800	Potri.001G164800(AS)	POPTR_0001s16520	NA	NA	AT1G54070.1	| Symbols: | Dormancy/auxin associated family protein | chr1:20182683-20183242 FORWARD LENGTH=123	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_01717	R	R	NA	NA	POPTR_0001s16530	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01718	A	A1S	Potri.001G164900	Potri.001G164900(AS)	POPTR_0001s16540	NA	NA	AT3G14172.2	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: COP1-interacting protein-related (TAIR:AT1G72410.1). | chr3:4698860-4704773 REVERSE LENGTH=1262	LOC_Os07g42410.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_01719	G	G1	NA	NA	POPTR_0001s16550	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01720	A	A1S	Potri.001G165000	Potri.001G165000(AS)	POPTR_0001s16560	sp|Q9LJX0|AB19B_ARATH	ABC transporter B family member 19 OS=Arabidopsis thaliana GN=ABCB19 PE=1 SV=1	AT3G28860.1	| Symbols: ATMDR1, ATMDR11, PGP19, MDR11, MDR1, ATPGP19, ABCB19, ATABCB19 | ATP binding cassette subfamily B19 | chr3:10870287-10877286 REVERSE LENGTH=1252	LOC_Os03g08380.1	protein|ABC transporter, ATP-binding protein, putative, expressed	IMGA|Medtr1g086080.1	ABC transporter B family member chr1 22880421-22874428 E EGN_Mt100125 20111014	GO:0000271|polysaccharide biosynthetic process GO:0006200|ATP catabolic process GO:0006810|transport GO:0007389|pattern specification process GO:0008361|regulation of cell size GO:0009637|response to blue light GO:0009639|response to red or far red light GO:0009640|photomorphogenesis GO:0009733|response to auxin stimulus GO:0009825|multidimensional cell growth GO:0009926|auxin polar transport GO:0009932|cell tip growth GO:0009958|positive gravitropism GO:0010015|root morphogenesis GO:0010048|vernalization response GO:0010218|response to far red light GO:0010540|basipetal auxin transport GO:0010541|acropetal auxin transport GO:0010817|regulation of hormone levels GO:0040007|growth GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0048364|root development GO:0048440|carpel development GO:0048443|stamen development GO:0048527|lateral root development GO:0048765|root hair cell differentiation GO:0048767|root hair elongation GO:0055085|transmembrane transport GO:0071555|cell wall organization	GO:0000166|nucleotide binding GO:0005515|protein binding GO:0005524|ATP binding GO:0010329|auxin efflux transmembrane transporter activity GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0005886|plasma membrane GO:0016021|integral to membrane
pt2_01721	B	B1S	Potri.001G165100	Potri.001G165100(BS)	POPTR_0001s16570	NA	NA	AT3G14170.1	| Symbols: | Plant protein of unknown function (DUF936) | chr3:4696115-4697989 REVERSE LENGTH=505	LOC_Os03g08390.2	protein|expressed protein	IMGA|Medtr5g034370.1	hypothetical protein chr5 14472516-14475481 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_01722	A	A1S	Potri.001G165200	Potri.001G165200(AS)	POPTR_0001s16580	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0007165|signal transduction GO:0009410|response to xenobiotic stimulus GO:0009723|response to ethylene stimulus GO:0009755|hormone-mediated signaling pathway GO:0030968|endoplasmic reticulum unfolded protein response GO:0045893|positive regulation of transcription, DNA-dependent GO:2000693|positive regulation of seed maturation	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0043565|sequence-specific DNA binding GO:0046982|protein heterodimerization activity GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_01723	A	A1S	Potri.001G165600	Potri.001G165600(AS)	POPTR_0001s16590	sp|Q94AU2|SEC22_ARATH	25.3 kDa vesicle transport protein OS=Arabidopsis thaliana GN=SEC22 PE=2 SV=1	AT1G11890.1	| Symbols: SEC22, ATSEC22 | Synaptobrevin family protein | chr1:4011509-4012835 FORWARD LENGTH=218	LOC_Os06g09850.1	protein|25.3 kDa vesicle transport protein, putative, expressed	NA	NA	GO:0006457|protein folding GO:0006810|transport GO:0009408|response to heat GO:0009644|response to high light intensity GO:0016192|vesicle-mediated transport GO:0034976|response to endoplasmic reticulum stress GO:0042542|response to hydrogen peroxide	GO:0005215|transporter activity	GO:0005783|endoplasmic reticulum GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_01724	A	A2S	Potri.001G165800	Potri.001G165800(AS) Potri.003G069200(DS)	POPTR_0001s16600	NA	NA	AT1G72390.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Spt20 family (InterPro:IPR021950); Has 8778 Blast hits to 7244 proteins in 477 species: Archae - 6; Bacteria - 326; Metazoa - 4198; Fungi - 1506; Plants - 923; Viruses - 22; Other Eukaryotes - 1797 (source: NCBI BLink). | chr1:27245455-27251218 FORWARD LENGTH=1325	LOC_Os10g25200.1	protein|expressed protein	IMGA|Medtr5g009590.1	hypothetical protein chr5 2097955-2104904 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01725	A	A1S	Potri.001G165900	Potri.001G165900(AS)	POPTR_0001s16610	sp|P57740|NU107_HUMAN	Nuclear pore complex protein Nup107 OS=Homo sapiens GN=NUP107 PE=1 SV=1	AT3G14120.2	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport; LOCATED IN: nuclear pore; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear pore protein 84/107 (InterPro:IPR007252); Has 271 Blast hits to 268 proteins in 107 species: Archae - 0; Bacteria - 0; Metazoa - 138; Fungi - 69; Plants - 52; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). | chr3:4677993-4685455 FORWARD LENGTH=1077	LOC_Os11g42420.1	protein|nuclear pore protein 84/107 containing protein, expressed	NA	NA	GO:0006810|transport	GO:0005515|protein binding	GO:0005634|nucleus GO:0005635|nuclear envelope GO:0005643|nuclear pore
pt2_01726	A	A1S	Potri.001G166000	Potri.001G166000(AS)	POPTR_0001s16620	sp|Q940U6|FLU_ARATH	Protein FLUORESCENT IN BLUE LIGHT, chloroplastic OS=Arabidopsis thaliana GN=FLU PE=1 SV=1	AT3G14110.1	| Symbols: FLU | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:4676222-4677602 REVERSE LENGTH=316	LOC_Os01g32730.2	protein|tetratricopeptide repeat containing protein, putative, expressed	NA	NA	GO:0000096|sulfur amino acid metabolic process GO:0000304|response to singlet oxygen GO:0006364|rRNA processing GO:0006546|glycine catabolic process GO:0006636|unsaturated fatty acid biosynthetic process GO:0006655|phosphatidylglycerol biosynthetic process GO:0006733|oxidoreduction coenzyme metabolic process GO:0006766|vitamin metabolic process GO:0008652|cellular amino acid biosynthetic process GO:0009072|aromatic amino acid family metabolic process GO:0009073|aromatic amino acid family biosynthetic process GO:0009106|lipoate metabolic process GO:0009108|coenzyme biosynthetic process GO:0009117|nucleotide metabolic process GO:0009416|response to light stimulus GO:0009695|jasmonic acid biosynthetic process GO:0009965|leaf morphogenesis GO:0015994|chlorophyll metabolic process GO:0015995|chlorophyll biosynthetic process GO:0016117|carotenoid biosynthetic process GO:0019216|regulation of lipid metabolic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019344|cysteine biosynthetic process GO:0019748|secondary metabolic process GO:0030154|cell differentiation GO:0031408|oxylipin biosynthetic process GO:0044272|sulfur compound biosynthetic process GO:0045893|positive regulation of transcription, DNA-dependent	GO:0005515|protein binding	GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009941|chloroplast envelope GO:0016020|membrane
pt2_01727	A	A1S	Potri.001G166100	Potri.001G166100(AS)	POPTR_0001s16630	sp|Q01085|TIAR_HUMAN	Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 PE=1 SV=1	AT1G17370.1	| Symbols: UBP1B | oligouridylate binding protein 1B | chr1:5951842-5954825 REVERSE LENGTH=419	LOC_Os07g42380.1	protein|RNA recognition motif containing protein, putative, expressed	IMGA|Medtr1g019150.1	Polyadenylate-binding protein chr1 5864665-5869890 F EGN_Mt100125 20111014	NA	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003730|mRNA 3'-UTR binding	NA
pt2_01728	A	A1S	Potri.001G166200	Potri.001G166200(AS)	POPTR_0001s16640	sp|Q9LMA8|TI10A_ARATH	Protein TIFY 10A OS=Arabidopsis thaliana GN=TIFY10A PE=1 SV=1	AT1G19180.1	| Symbols: JAZ1, TIFY10A | jasmonate-zim-domain protein 1 | chr1:6622312-6623271 FORWARD LENGTH=253	LOC_Os03g28940.1	protein|ZIM domain containing protein, putative, expressed	IMGA|Medtr5g013530.1	Protein TIFY chr5 4054231-4055270 F EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0006612|protein targeting to membrane GO:0007165|signal transduction GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009555|pollen development GO:0009605|response to external stimulus GO:0009611|response to wounding GO:0009620|response to fungus GO:0009693|ethylene biosynthetic process GO:0009695|jasmonic acid biosynthetic process GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009753|response to jasmonic acid stimulus GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009908|flower development GO:0010200|response to chitin GO:0010363|regulation of plant-type hypersensitive response GO:0030968|endoplasmic reticulum unfolded protein response GO:0031348|negative regulation of defense response GO:0035556|intracellular signal transduction GO:0042538|hyperosmotic salinity response GO:0042742|defense response to bacterium GO:0043069|negative regulation of programmed cell death GO:0050832|defense response to fungus	GO:0005515|protein binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01729	A	A1S	Potri.001G166300	Potri.001G166300(AS)	POPTR_0001s16650	sp|Q3E991|Y5269_ARATH	Probable inactive leucine-rich repeat receptor-like protein kinase At5g20690 OS=Arabidopsis thaliana GN=At5g20690 PE=2 SV=4	AT3G42880.1	| Symbols: | Leucine-rich repeat protein kinase family protein | chr3:14954587-14956577 FORWARD LENGTH=633	LOC_Os06g09860.1	protein|expressed protein	IMGA|Medtr1g061590.1	hypothetical protein chr1 15709146-15711715 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005576|extracellular region GO:0009506|plasmodesma
pt2_01730	A	A1S	Potri.001G166400	Potri.001G166400(AS)	POPTR_0001s16660	sp|O54922|EXOC7_RAT	Exocyst complex component 7 OS=Rattus norvegicus GN=Exoc7 PE=2 SV=1	AT3G14090.1	| Symbols: ATEXO70D3, EXO70D3 | exocyst subunit exo70 family protein D3 | chr3:4669508-4671379 REVERSE LENGTH=623	LOC_Os09g26820.1	protein|exo70 exocyst complex subunit, putative, expressed	IMGA|Medtr5g073450.1	Exocyst complex component chr5 30274154-30276420 E EGN_Mt100125 20111014	GO:0006887|exocytosis GO:0006904|vesicle docking involved in exocytosis GO:0009738|abscisic acid mediated signaling pathway GO:0035556|intracellular signal transduction	NA	GO:0000145|exocyst GO:0005623|cell GO:0005634|nucleus GO:0005829|cytosol
pt2_01731	A	A1S	Potri.001G166500	Potri.001G166500(AS)	POPTR_0001s16670	sp|Q28EW0|TM87A_XENTR	Transmembrane protein 87A OS=Xenopus tropicalis GN=tmem87a PE=2 SV=1	AT1G72480.1	| Symbols: | Lung seven transmembrane receptor family protein | chr1:27286304-27288339 REVERSE LENGTH=509	LOC_Os09g26830.1	protein|lung seven transmembrane domain containing protein, putative, expressed	IMGA|Medtr5g067670.1	Transmembrane protein 87B chr5 27609093-27604465 E EGN_Mt100125 20111014	GO:0007020|microtubule nucleation GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005794|Golgi apparatus GO:0016021|integral to membrane
pt2_01732	A	A2S	Potri.001G166600	Potri.001G166600(AS) Potri.003G068400(DS)	POPTR_0001s16680	sp|Q54W83|LSM1_DICDI	Probable U6 snRNA-associated Sm-like protein LSm1 OS=Dictyostelium discoideum GN=lsm1 PE=3 SV=1	AT3G14080.2	| Symbols: | Small nuclear ribonucleoprotein family protein | chr3:4667717-4668989 FORWARD LENGTH=128	LOC_Os04g36810.1	protein|LSM domain containing protein, expressed	NA	NA	GO:0010228|vegetative to reproductive phase transition of meristem	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005732|small nucleolar ribonucleoprotein complex
pt2_01733	A	A1S	Potri.001G166700	Potri.001G166700(AS)	POPTR_0001s16690	NA	NA	AT1G72490.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G17400.1); Has 75 Blast hits to 75 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 4; Plants - 58; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). | chr1:27289435-27290732 REVERSE LENGTH=287	LOC_Os07g42290.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_01734	A	A1S	Potri.001G166800	Potri.001G166800(AS)	POPTR_0001s16700	sp|Q54DU5|Y2028_DICDI	von Willebrand factor A domain-containing protein DDB_G0292028 OS=Dictyostelium discoideum GN=DDB_G0292028 PE=4 SV=1	AT1G19110.1	| Symbols: | inter-alpha-trypsin inhibitor heavy chain-related | chr1:6602270-6605766 FORWARD LENGTH=754	LOC_Os07g42280.1	protein|von Willebrand factor type A domain containing protein, expressed	NA	NA	GO:0008150|biological_process GO:0009690|cytokinin metabolic process GO:0019344|cysteine biosynthetic process	GO:0003674|molecular_function	GO:0005576|extracellular region GO:0005886|plasma membrane GO:0016020|membrane
pt2_01735	A	A1S	Potri.001G166900	Potri.001G166900(AS)	POPTR_0001s16710	NA	NA	AT1G72510.2	| Symbols: | Protein of unknown function (DUF1677) | chr1:27303906-27304403 FORWARD LENGTH=165	LOC_Os06g09900.1	protein|expressed protein	IMGA|Medtr5g006430.1	hypothetical protein chr5 679306-678971 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01736	A	A1S	Potri.001G167000	Potri.001G167000(AS)	POPTR_0001s16720	sp|Q9SDG8|AGO4A_ORYSJ	Protein argonaute 4A OS=Oryza sativa subsp. japonica GN=AGO4A PE=2 SV=1	AT2G27040.2	| Symbols: AGO4 | Argonaute family protein | chr2:11536795-11541503 REVERSE LENGTH=924	LOC_Os01g16870.3	protein|argonaute, putative, expressed	IMGA|Medtr5g087870.2	Protein argonaute 4 chr5 37098437-37107439 F EGN_Mt100125 20111014	GO:0010529|negative regulation of transposition GO:0048481|ovule development	GO:0003676|nucleic acid binding GO:0035197|siRNA binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_01737	A	A1S	Potri.001G167100	Potri.001G167100(AS)	POPTR_0001s16730	sp|Q9SYG7|AL7B4_ARATH	Aldehyde dehydrogenase family 7 member B4 OS=Arabidopsis thaliana GN=ALDH7B4 PE=2 SV=3	AT1G54100.2	| Symbols: ALDH7B4 | aldehyde dehydrogenase 7B4 | chr1:20195435-20198853 REVERSE LENGTH=508	LOC_Os09g26880.1	protein|aldehyde dehydrogenase, putative, expressed	IMGA|Medtr1g014320.1	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase chr1 3773177-3769070 E EGN_Mt100125 20111014	GO:0000303|response to superoxide GO:0008152|metabolic process GO:0009269|response to desiccation GO:0009651|response to salt stress GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009743|response to carbohydrate stimulus GO:0009873|ethylene mediated signaling pathway GO:0015996|chlorophyll catabolic process GO:0055114|oxidation-reduction process	GO:0004028|3-chloroallyl aldehyde dehydrogenase activity GO:0016491|oxidoreductase activity	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_01738	A	A1S	Potri.001G167200	Potri.001G167200(AS)	POPTR_0001s16740	sp|Q9SYG9|CCX4_ARATH	Cation/calcium exchanger 4 OS=Arabidopsis thaliana GN=CCX4 PE=2 SV=1	AT1G54115.1	| Symbols: ATCCX4, CCX4 | cation calcium exchanger 4 | chr1:20202118-20204052 FORWARD LENGTH=644	LOC_Os03g08230.1	protein|sodium/calcium exchanger protein, putative, expressed	IMGA|Medtr5g099160.1	Cation/calcium exchanger chr5 42426874-42427246 H EGN_Mt100125 20111014	GO:0006812|cation transport GO:0055085|transmembrane transport	GO:0015491|cation:cation antiporter activity	GO:0016021|integral to membrane
pt2_01739	A	A1S	Potri.001G167300	Potri.001G167300(AS)	POPTR_0001s16750	sp|O65351|SUBL_ARATH	Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1	AT3G14067.1	| Symbols: | Subtilase family protein | chr3:4658421-4660754 REVERSE LENGTH=777	LOC_Os02g53860.1	protein|OsSub22 - Putative Subtilisin homologue, expressed	IMGA|Medtr5g016120.1	Subtilisin-like protease chr5 5470271-5467977 H EGN_Mt100125 20111014	GO:0006508|proteolysis GO:0008152|metabolic process GO:0015996|chlorophyll catabolic process GO:0043086|negative regulation of catalytic activity	GO:0004252|serine-type endopeptidase activity GO:0042802|identical protein binding	GO:0005576|extracellular region GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0009505|plant-type cell wall GO:0048046|apoplast
pt2_01740	A	A2S	Potri.001G167400	Potri.001G167400(AS) Potri.003G067100(DS)	POPTR_0001s16760	sp|Q940X7|RBX1A_ARATH	RING-box protein 1a OS=Arabidopsis thaliana GN=RBX1A PE=1 SV=1	AT5G20570.1	| Symbols: ROC1, RBX1, HRT1, ATRBX1 | RING-box 1 | chr5:6956905-6958221 REVERSE LENGTH=118	LOC_Os02g47870.1	protein|anaphase-promoting complex subunit 11, putative, expressed	NA	NA	GO:0006511|ubiquitin-dependent protein catabolic process GO:0009733|response to auxin stimulus GO:0009853|photorespiration GO:0016567|protein ubiquitination GO:0016925|protein sumoylation GO:0042023|DNA endoreduplication GO:0042752|regulation of circadian rhythm GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0043248|proteasome assembly GO:0051510|regulation of unidimensional cell growth GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	GO:0005515|protein binding GO:0008270|zinc ion binding	GO:0005634|nucleus GO:0019005|SCF ubiquitin ligase complex GO:0031463|Cul3-RING ubiquitin ligase complex
pt2_01741	A	A2S	Potri.001G167600	Potri.001G167600(AS) Potri.003G067200(DS)	POPTR_0001s16770	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_01742	A	A1S	Potri.001G167700	Potri.001G167700(AS)	POPTR_0001s16780	sp|O24371|LOX31_SOLTU	Linoleate 13S-lipoxygenase 3-1, chloroplastic OS=Solanum tuberosum GN=LOX3.1 PE=1 SV=1	AT1G17420.1	| Symbols: LOX3 | lipoxygenase 3 | chr1:5977512-5981384 FORWARD LENGTH=919	LOC_Os03g08220.1	protein|lipoxygenase protein, putative, expressed	IMGA|Medtr1g083020.1	Lipoxygenase chr1 21433844-21440226 E EGN_Mt100125 20111014	GO:0006952|defense response GO:0009555|pollen development GO:0009611|response to wounding GO:0009620|response to fungus GO:0009644|response to high light intensity GO:0009693|ethylene biosynthetic process GO:0009695|jasmonic acid biosynthetic process GO:0009753|response to jasmonic acid stimulus GO:0009901|anther dehiscence GO:0010200|response to chitin GO:0034440|lipid oxidation GO:0040007|growth GO:0048653|anther development GO:0080086|stamen filament development	GO:0016165|lipoxygenase activity	GO:0009507|chloroplast
pt2_01743	A	A1S	Potri.001G167800	Potri.001G167800(AS)	POPTR_0001s16790	sp|P24465|C71A1_PERAE	Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=2	AT5G07990.1	| Symbols: TT7, CYP75B1, D501 | Cytochrome P450 superfamily protein | chr5:2560437-2562859 FORWARD LENGTH=513	LOC_Os09g26960.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g070920.1	Cytochrome P450 chr5 29084191-29081597 E EGN_Mt100125 20111014	GO:0009411|response to UV GO:0009718|anthocyanin-containing compound biosynthetic process GO:0009733|response to auxin stimulus GO:0009744|response to sucrose stimulus GO:0009813|flavonoid biosynthetic process GO:0010224|response to UV-B GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0016711|flavonoid 3'-monooxygenase activity GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005576|extracellular region
pt2_01744	A	A1S	Potri.001G167900	Potri.001G167900(AS)	POPTR_0001s16800	sp|P24465|C71A1_PERAE	Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=2	AT5G07990.1	| Symbols: TT7, CYP75B1, D501 | Cytochrome P450 superfamily protein | chr5:2560437-2562859 FORWARD LENGTH=513	LOC_Os09g26960.1	protein|cytochrome P450, putative, expressed	IMGA|contig_54697_1.1	Cytochrome P450 contig_54697 2553-621 F PREDN 20111014	GO:0009411|response to UV GO:0009718|anthocyanin-containing compound biosynthetic process GO:0009733|response to auxin stimulus GO:0009744|response to sucrose stimulus GO:0009813|flavonoid biosynthetic process GO:0010224|response to UV-B GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0016711|flavonoid 3'-monooxygenase activity GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005576|extracellular region
pt2_01745	A	A1S	Potri.001G168000	Potri.001G168000(AS)	POPTR_0001s16810	sp|Q9CAH1|Y1725_ARATH	Putative receptor-like protein kinase At1g72540 OS=Arabidopsis thaliana GN=At1g72540 PE=2 SV=1	AT2G05940.1	| Symbols: | Protein kinase superfamily protein | chr2:2287514-2289270 REVERSE LENGTH=462	LOC_Os10g25550.1	protein|tyrosine protein kinase domain containing protein, putative, expressed	IMGA|Medtr1g015020.1	Protein kinase 2B chr1 4061824-4059575 E EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0006468|protein phosphorylation GO:0006499|N-terminal protein myristoylation GO:0006612|protein targeting to membrane GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009605|response to external stimulus GO:0009611|response to wounding GO:0009625|response to insect GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process GO:0009738|abscisic acid mediated signaling pathway GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010363|regulation of plant-type hypersensitive response GO:0016036|cellular response to phosphate starvation GO:0019375|galactolipid biosynthetic process GO:0030968|endoplasmic reticulum unfolded protein response GO:0031348|negative regulation of defense response GO:0042538|hyperosmotic salinity response GO:0042631|cellular response to water deprivation GO:0042742|defense response to bacterium GO:0043069|negative regulation of programmed cell death GO:0045087|innate immune response GO:0050832|defense response to fungus	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_01746	C	C1S	Potri.001G168100	Potri.001G168100(CS)	sp|Q7PC79|XPOT_ARATH	Exportin-T OS=Arabidopsis thaliana GN=PSD PE=2 SV=1	AT1G72560.3	| Symbols: PSD | ARM repeat superfamily protein | chr1:27325026-27329467 REVERSE LENGTH=988	LOC_Os07g42180.1	protein|exportin 1, putative, expressed	IMGA|contig_69685_1.1	Unknown protein contig_69685 826-467 H PREDN 20111014	GO:0006406|mRNA export from nucleus GO:0006409|tRNA export from nucleus GO:0006499|N-terminal protein myristoylation GO:0006606|protein import into nucleus GO:0009640|photomorphogenesis GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009908|flower development GO:0009909|regulation of flower development GO:0009933|meristem structural organization GO:0010014|meristem initiation GO:0010162|seed dormancy process GO:0010182|sugar mediated signaling pathway GO:0010228|vegetative to reproductive phase transition of meristem GO:0016567|protein ubiquitination GO:0019915|lipid storage GO:0050826|response to freezing	GO:0000049|tRNA binding GO:0015932|nucleobase-containing compound transmembrane transporter activity	GO:0005829|cytosol
pt2_01747	R	R	NA	NA	POPTR_0001s16825	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01748	A	A2S	Potri.001G168200	Potri.001G168200(AS) Potri.003G066000(DS)	POPTR_0001s16830	sp|P74007|SPOT_SYNY3	Probable guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=spoT PE=3 SV=1	AT1G54130.1	| Symbols: RSH3, AT-RSH3, ATRSH3 | RELA/SPOT homolog 3 | chr1:20211177-20213761 FORWARD LENGTH=715	LOC_Os08g35620.1	protein|HD domain containing protein, putative, expressed	IMGA|Medtr5g007870.1	GTP pyrophosphokinase chr5 1321884-1334785 E EGN_Mt100125 20111014	GO:0015969|guanosine tetraphosphate metabolic process	GO:0003824|catalytic activity GO:0008081|phosphoric diester hydrolase activity GO:0008728|GTP diphosphokinase activity GO:0046872|metal ion binding	GO:0009507|chloroplast
pt2_01749	A	A1S	Potri.001G168200	Potri.001G168200(AS)	POPTR_0001s16830	sp|P74007|SPOT_SYNY3	Probable guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=spoT PE=3 SV=1	AT1G54130.1	| Symbols: RSH3, AT-RSH3, ATRSH3 | RELA/SPOT homolog 3 | chr1:20211177-20213761 FORWARD LENGTH=715	LOC_Os08g35620.1	protein|HD domain containing protein, putative, expressed	IMGA|Medtr5g007870.1	GTP pyrophosphokinase chr5 1321884-1334785 E EGN_Mt100125 20111014	GO:0015969|guanosine tetraphosphate metabolic process	GO:0003824|catalytic activity GO:0008081|phosphoric diester hydrolase activity GO:0008728|GTP diphosphokinase activity GO:0046872|metal ion binding	GO:0009507|chloroplast
pt2_01750	A	A1S	Potri.001G168200	Potri.001G168200(AS)	POPTR_0001s16830	sp|P74007|SPOT_SYNY3	Probable guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=spoT PE=3 SV=1	AT1G54130.1	| Symbols: RSH3, AT-RSH3, ATRSH3 | RELA/SPOT homolog 3 | chr1:20211177-20213761 FORWARD LENGTH=715	LOC_Os08g35620.1	protein|HD domain containing protein, putative, expressed	IMGA|Medtr5g007870.1	GTP pyrophosphokinase chr5 1321884-1334785 E EGN_Mt100125 20111014	GO:0015969|guanosine tetraphosphate metabolic process	GO:0003824|catalytic activity GO:0008081|phosphoric diester hydrolase activity GO:0008728|GTP diphosphokinase activity GO:0046872|metal ion binding	GO:0009507|chloroplast
pt2_01751	A	A1S	Potri.001G168200	Potri.001G168200(AS)	POPTR_0001s16830	sp|P74007|SPOT_SYNY3	Probable guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=spoT PE=3 SV=1	AT1G54130.1	| Symbols: RSH3, AT-RSH3, ATRSH3 | RELA/SPOT homolog 3 | chr1:20211177-20213761 FORWARD LENGTH=715	LOC_Os08g35620.1	protein|HD domain containing protein, putative, expressed	IMGA|Medtr5g007870.1	GTP pyrophosphokinase chr5 1321884-1334785 E EGN_Mt100125 20111014	GO:0015969|guanosine tetraphosphate metabolic process	GO:0003824|catalytic activity GO:0008081|phosphoric diester hydrolase activity GO:0008728|GTP diphosphokinase activity GO:0046872|metal ion binding	GO:0009507|chloroplast
pt2_01752	A	A1S	Potri.001G168300	Potri.001G168300(AS)	POPTR_0001s16840	sp|Q17QQ4|TAF9_BOVIN	Transcription initiation factor TFIID subunit 9 OS=Bos taurus GN=TAF9 PE=2 SV=1	AT1G54140.1	| Symbols: TAFII21, TAF9 | TATA binding protein associated factor 21kDa subunit | chr1:20214076-20214869 REVERSE LENGTH=183	LOC_Os03g29470.1	protein|transcription initiation factor IID, putative, expressed	NA	NA	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0006352|DNA-dependent transcription, initiation GO:0006366|transcription from RNA polymerase II promoter GO:0009560|embryo sac egg cell differentiation	GO:0003677|DNA binding	GO:0005634|nucleus GO:0005669|transcription factor TFIID complex
pt2_01753	A	A1S	Potri.001G168400	Potri.001G168400(AS)	POPTR_0001s16850	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01754	C	C1S	Potri.001G168500	Potri.001G168500(CS)	sp|Q9ZR09|FDL25_ARATH	Putative F-box/FBD/LRR-repeat protein At4g03220 OS=Arabidopsis thaliana GN=At4g03220 PE=4 SV=1	AT4G03220.1	| Symbols: | Protein with RNI-like/FBD-like domains | chr4:1417472-1419148 FORWARD LENGTH=498	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01755	A	A1S	Potri.001G168600	Potri.001G168600(AS)	POPTR_0001s16870	NA	NA	AT1G17430.1	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr1:5982310-5983919 FORWARD LENGTH=332	LOC_Os03g08110.1	protein|hydrolase protein, putative, expressed	IMGA|Medtr5g064040.1	Leucine-rich repeat-containing protein chr5 25855744-25864821 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0016787|hydrolase activity	GO:0005737|cytoplasm
pt2_01756	A	A1S	Potri.001G168700	Potri.001G168700(AS)	POPTR_0001s16880	NA	NA	AT1G54150.1	| Symbols: | E3 Ubiquitin ligase family protein | chr1:20215480-20217303 FORWARD LENGTH=383	LOC_Os03g08000.1	protein|expressed protein	NA	NA	NA	GO:0008270|zinc ion binding GO:0016881|acid-amino acid ligase activity	GO:0005739|mitochondrion
pt2_01757	A	A1S	Potri.001G168800	Potri.001G168800(AS)	POPTR_0001s16890	sp|Q4VYC8|NSP1_MEDTR	Nodulation-signaling pathway 1 protein OS=Medicago truncatula GN=NSP1 PE=1 SV=1	AT3G13840.1	| Symbols: | GRAS family transcription factor | chr3:4555305-4556837 REVERSE LENGTH=510	LOC_Os03g29480.1	protein|nodulation-signaling pathway 1 protein, putative, expressed	IMGA|Medtr5g015490.1	GRAS family transcription factor chr5 5109613-5108138 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01758	A	A1S	Potri.001G168900	Potri.001G168900(AS)	POPTR_0001s16900	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01759	A	A3S	Potri.001G169000	Potri.001G169000(AS) Potri.003G065300(DS) Potri.013G141900(DS)	POPTR_0001s16910	sp|Q9ZRA4|AB19A_PRUPE	Auxin-binding protein ABP19a OS=Prunus persica GN=ABP19A PE=3 SV=1	AT1G72610.1	| Symbols: GLP1, ATGER1, GER1 | germin-like protein 1 | chr1:27339302-27339928 REVERSE LENGTH=208	LOC_Os08g35760.1	protein|Cupin domain containing protein, expressed	IMGA|Medtr5g031460.1	Auxin-binding protein ABP19a chr5 13065372-13066001 H EGN_Mt100125 20111014	GO:0008150|biological_process GO:0010103|stomatal complex morphogenesis GO:0030003|cellular cation homeostasis GO:0070838|divalent metal ion transport	GO:0030145|manganese ion binding GO:0045735|nutrient reservoir activity	GO:0005576|extracellular region GO:0031012|extracellular matrix GO:0048046|apoplast
pt2_01760	A	A1S	Potri.001G169100	Potri.001G169100(AS)	POPTR_0001s16920	NA	NA	AT3G13960.1	| Symbols: AtGRF5, GRF5 | growth-regulating factor 5 | chr3:4608526-4610160 FORWARD LENGTH=397	LOC_Os02g53690.1	protein|growth regulating factor protein, putative, expressed	IMGA|Medtr5g027030.1	hypothetical protein chr5 10949245-10952049 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009737|response to abscisic acid stimulus GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009909|regulation of flower development GO:0009965|leaf morphogenesis GO:0010162|seed dormancy process GO:0016570|histone modification GO:0048366|leaf development GO:0048449|floral organ formation	GO:0005524|ATP binding GO:0016818|hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	GO:0005634|nucleus
pt2_01761	A	A2S	Potri.001G169200	Potri.001G169200(AS) Potri.001G169300(BA)	POPTR_0001s16930	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_01762	R	R	NA	NA	POPTR_0001s16940	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01763	A	A1S	Potri.001G169400	Potri.001G169400(AS)	POPTR_0001s16950	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0016020|membrane
pt2_01764	A	A1S	Potri.001G169500	Potri.001G169500(AS)	POPTR_0001s16960	sp|Q1PFE1|AIL1_ARATH	AP2-like ethylene-responsive transcription factor AIL1 OS=Arabidopsis thaliana GN=AIL1 PE=2 SV=1	AT1G72570.1	| Symbols: | Integrase-type DNA-binding superfamily protein | chr1:27331381-27333698 FORWARD LENGTH=415	LOC_Os01g67410.1	protein|AP2/EREBP transcription factor BABY BOOM, putative, expressed	IMGA|Medtr5g015070.1	AP2-like ethylene-responsive transcription factor ANT chr5 4923104-4919660 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009686|gibberellin biosynthetic process GO:0009887|organ morphogenesis	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_01765	A	A1S	Potri.001G169600	Potri.001G169600(AS)	POPTR_0001s16970	sp|Q9SEI0|WER_ARATH	Transcription factor WER OS=Arabidopsis thaliana GN=WER PE=1 SV=1	AT5G14750.1	| Symbols: WER, ATMYB66, WER1, MYB66 | myb domain protein 66 | chr5:4763656-4764738 REVERSE LENGTH=203	LOC_Os01g50110.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr5g079670.1	Myb-like transcription factor chr5 33056957-33055245 E EGN_Mt100125 20111014	GO:0001708|cell fate specification GO:0006355|regulation of transcription, DNA-dependent GO:0009913|epidermal cell differentiation GO:0010026|trichome differentiation GO:0010053|root epidermal cell differentiation GO:0010091|trichome branching GO:0048629|trichome patterning	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_01766	A	A2S	Potri.001G169700	Potri.001G169700(AS) Potri.003G064300(BS)	POPTR_0001s16980	sp|Q1SF86|ATG12_MEDTR	Ubiquitin-like protein ATG12 OS=Medicago truncatula GN=ATG12 PE=3 SV=1	AT1G54210.1	| Symbols: APG12, ATG12A, ATATG12 | Ubiquitin-like superfamily protein | chr1:20241278-20242020 FORWARD LENGTH=96	LOC_Os06g10340.1	protein|autophagy-related protein 12, putative, expressed	NA	NA	GO:0000045|autophagic vacuole assembly GO:0006661|phosphatidylinositol biosynthetic process GO:0006914|autophagy GO:0042787|protein ubiquitination involved in ubiquitin-dependent protein catabolic process	NA	GO:0005737|cytoplasm GO:0009507|chloroplast
pt2_01767	A	A1S	Potri.001G169800	Potri.001G169800(AS)	POPTR_0001s16990	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01768	A	A1S	Potri.001G169900	Potri.001G169900(AS)	POPTR_0001s17000	sp|Q8VE65|TAF12_MOUSE	Transcription initiation factor TFIID subunit 12 OS=Mus musculus GN=Taf12 PE=1 SV=1	AT1G17440.2	| Symbols: EER4, TAF12B | Transcription initiation factor TFIID subunit A | chr1:5984407-5987663 REVERSE LENGTH=683	LOC_Os01g62820.1	protein|Transcription initiation factor TFIID subunit A containing protein, expressed	NA	NA	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0006352|DNA-dependent transcription, initiation GO:0006366|transcription from RNA polymerase II promoter GO:0009736|cytokinin mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010104|regulation of ethylene mediated signaling pathway	GO:0003674|molecular_function GO:0003677|DNA binding	GO:0005575|cellular_component GO:0005634|nucleus GO:0005669|transcription factor TFIID complex
pt2_01769	A	A1S	Potri.001G170000	Potri.001G170000(AS)	POPTR_0001s17005	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01770	A	A2S	Potri.001G170100	Potri.001G170100(AS) Potri.003G063900(DS)	POPTR_0001s17010	sp|Q570U6|EF4L4_ARATH	Protein ELF4-LIKE 4 OS=Arabidopsis thaliana GN=EFL4 PE=2 SV=1	AT1G17455.2	| Symbols: ELF4-L4 | ELF4-like 4 | chr1:5997932-5998276 FORWARD LENGTH=114	LOC_Os11g40610.4	protein|EARLY flowering protein, putative, expressed	NA	NA	GO:0008150|biological_process GO:0009648|photoperiodism	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_01771	A	A1S	Potri.001G170200	Potri.001G170200(AS)	POPTR_0001s17020	NA	NA	AT1G72650.2	| Symbols: TRFL6 | TRF-like 6 | chr1:27350253-27353483 FORWARD LENGTH=630	LOC_Os02g53670.1	protein|MYB family transcription factor, putative, expressed	NA	NA	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0009651|response to salt stress GO:0010048|vernalization response GO:0010162|seed dormancy process GO:0045892|negative regulation of transcription, DNA-dependent GO:0046686|response to cadmium ion	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus GO:0022626|cytosolic ribosome
pt2_01772	A	A1S	Potri.001G170300	Potri.001G170300(AS)	POPTR_0001s17030	sp|Q9CAI1|DRG2_ARATH	Developmentally regulated G-protein 2 OS=Arabidopsis thaliana GN=DRG2 PE=2 SV=1	AT1G72660.3	| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:27354161-27356543 FORWARD LENGTH=399	LOC_Os05g28940.1	protein|GTP-binding protein, putative, expressed	NA	NA	GO:0006457|protein folding GO:0009408|response to heat GO:0009644|response to high light intensity GO:0016114|terpenoid biosynthetic process GO:0042542|response to hydrogen peroxide	GO:0005525|GTP binding	GO:0005737|cytoplasm
pt2_01773	A	A1S	Potri.001G170400	Potri.001G170400(AS)	POPTR_0001s17040	sp|Q9SKI2|VPS2A_ARATH	Vacuolar protein sorting-associated protein 2 homolog 1 OS=Arabidopsis thaliana GN=VPS2.1 PE=1 SV=2	AT2G06530.1	| Symbols: VPS2.1 | SNF7 family protein | chr2:2588740-2590285 REVERSE LENGTH=225	LOC_Os07g13270.1	protein|SNF7 domain containing protein, putative, expressed	NA	NA	GO:0006944|cellular membrane fusion GO:0009644|response to high light intensity GO:0010200|response to chitin GO:0015031|protein transport GO:0016192|vesicle-mediated transport GO:0042542|response to hydrogen peroxide GO:0048193|Golgi vesicle transport	GO:0005515|protein binding	GO:0000815|ESCRT III complex GO:0005771|multivesicular body
pt2_01774	A	A1S	Potri.001G170500	Potri.001G170500(AS)	POPTR_0001s17050	NA	NA	AT1G54200.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13980.1); Has 1084 Blast hits to 581 proteins in 136 species: Archae - 0; Bacteria - 72; Metazoa - 212; Fungi - 78; Plants - 102; Viruses - 0; Other Eukaryotes - 620 (source: NCBI BLink). | chr1:20235855-20236955 FORWARD LENGTH=366	NA	NA	NA	NA	GO:0008150|biological_process GO:0009855|determination of bilateral symmetry GO:0009944|polarity specification of adaxial/abaxial axis GO:0010014|meristem initiation GO:0010075|regulation of meristem growth	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01775	A	A1S	Potri.001G170600	Potri.001G170600(AS)	POPTR_0001s17060	NA	NA	NA	NA	NA	NA	NA	NA	NA	GO:0004722|protein serine/threonine phosphatase activity GO:0016787|hydrolase activity	GO:0005634|nucleus
pt2_01776	A	A1S	Potri.001G170700	Potri.001G170700(AS)	POPTR_0001s17070	NA	NA	AT3G13990.2	| Symbols: | Kinase-related protein of unknown function (DUF1296) | chr3:4625708-4630383 REVERSE LENGTH=847	LOC_Os03g29750.1	protein|expressed protein	IMGA|contig_51617_1.1	Hydroxyproline-rich glycoprotein-like protein contig_51617 1660-982 E PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005829|cytosol
pt2_01777	A	A2S	Potri.001G170800	Potri.001G170800(AS) Potri.003G063200(DS)	POPTR_0001s17080	sp|Q8GYL9|BRXL2_ARATH	Protein Brevis radix-like 2 OS=Arabidopsis thaliana GN=BRXL2 PE=2 SV=1	AT3G14000.2	| Symbols: ATBRXL2, BRX-LIKE2 | DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein | chr3:4631170-4633353 REVERSE LENGTH=374	LOC_Os08g36020.1	protein|Disease resistance/zinc finger/chromosome condensation-like region protein, putative, expressed	IMGA|Medtr5g026970.1	Protein BREVIS RADIX chr5 10930283-10925938 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01778	A	A1S	Potri.001G171000	Potri.001G171000(AS)	POPTR_0001s17100	sp|Q9FNA9|PDAT1_ARATH	Phospholipid:diacylglycerol acyltransferase 1 OS=Arabidopsis thaliana GN=PDAT1 PE=2 SV=1	AT5G13640.1	| Symbols: ATPDAT, PDAT, PDAT1 | phospholipid:diacylglycerol acyltransferase | chr5:4393529-4397213 FORWARD LENGTH=671	LOC_Os09g27210.1	protein|lecithine cholesterol acyltransferase, putative, expressed	NA	NA	GO:0006629|lipid metabolic process	GO:0004607|phosphatidylcholine-sterol O-acyltransferase activity GO:0008374|O-acyltransferase activity GO:0046027|phospholipid:diacylglycerol acyltransferase activity	GO:0005634|nucleus GO:0005773|vacuole GO:0005783|endoplasmic reticulum
pt2_01779	A	A1S	Potri.001G171100	Potri.001G171100(AS)	POPTR_0001s17110	sp|Q55DE7|ATX2_DICDI	Ataxin-2 homolog OS=Dictyostelium discoideum GN=atxn2 PE=3 SV=1	AT3G14010.3	| Symbols: CID4 | CTC-interacting domain 4 | chr3:4637164-4640691 FORWARD LENGTH=595	LOC_Os02g27950.2	protein|ataxin-2 related protein, putative, expressed	NA	NA	GO:0009630|gravitropism	GO:0005515|protein binding	GO:0005634|nucleus
pt2_01780	A	A2S	Potri.001G171200	Potri.001G171200(AS) Potri.003G062800(DS)	POPTR_0001s17120	sp|Q5RC30|SC11C_PONAB	Signal peptidase complex catalytic subunit SEC11C OS=Pongo abelii GN=SEC11C PE=2 SV=3	AT1G52600.1	| Symbols: | Peptidase S24/S26A/S26B/S26C family protein | chr1:19590612-19592486 FORWARD LENGTH=180	LOC_Os06g16260.1	protein|OsSigP5 - Putative Type I Signal Peptidase homologue; employs a putative Ser/His catalytic dyad, expressed	NA	NA	GO:0006465|signal peptide processing GO:0006508|proteolysis GO:0009627|systemic acquired resistance GO:0034976|response to endoplasmic reticulum stress	GO:0008233|peptidase activity	GO:0005783|endoplasmic reticulum GO:0005886|plasma membrane GO:0009507|chloroplast GO:0016020|membrane
pt2_01781	G	G1	NA	NA	POPTR_0001s17130	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01782	A	A1S	Potri.001G171400	Potri.001G171400(AS)	POPTR_0001s17140	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01783	B	B1S	Potri.001G171500	Potri.001G171500(BS)	POPTR_0001s17150	sp|Q8W486|Y1491_ARATH	DUF246 domain-containing protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=1 SV=1	AT1G52630.2	| Symbols: | O-fucosyltransferase family protein | chr1:19606470-19607848 REVERSE LENGTH=351	LOC_Os08g42550.2	protein|AP2 domain containing protein, expressed	IMGA|Medtr5g081690.1	DUF246 domain-containing protein chr5 33993268-33990689 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0016757|transferase activity, transferring glycosyl groups	GO:0005794|Golgi apparatus
pt2_01784	A	A1S	Potri.001G171600	Potri.001G171600(AS)	POPTR_0001s17160	NA	NA	AT1G80160.1	| Symbols: | Lactoylglutathione lyase / glyoxalase I family protein | chr1:30151101-30151930 FORWARD LENGTH=167	LOC_Os05g07940.1	protein|glyoxalase family protein, putative, expressed	IMGA|Medtr5g021610.1	Lactoylglutathione lyase chr5 8120981-8119750 F EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0009414|response to water deprivation GO:0042538|hyperosmotic salinity response GO:0046482|para-aminobenzoic acid metabolic process	GO:0004462|lactoylglutathione lyase activity	GO:0005737|cytoplasm
pt2_01785	A	A1S	Potri.001G171700	Potri.001G171700(AS)	POPTR_0001s17165	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01786	A	A1S	Potri.001G171800	Potri.001G171800(AS)	POPTR_0001s17170	sp|Q9FUZ0|DEF1A_SOLLC	Peptide deformylase 1A, chloroplastic OS=Solanum lycopersicum GN=PDF1A PE=2 SV=1	AT1G15390.1	| Symbols: PDF1A, ATDEF1 | peptide deformylase 1A | chr1:5294653-5295625 FORWARD LENGTH=269	LOC_Os01g37510.1	protein|peptide deformylase, putative, expressed	NA	NA	GO:0006412|translation GO:0043686|co-translational protein modification	GO:0005506|iron ion binding GO:0042586|peptide deformylase activity	GO:0005739|mitochondrion GO:0009505|plant-type cell wall GO:0009507|chloroplast
pt2_01787	B	B1S	Potri.001G171900	Potri.001G171900(BS)	POPTR_0001s17180	sp|Q94AJ5|PGLR5_ARATH	Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana GN=At1g80170 PE=1 SV=1	AT1G80170.1	| Symbols: | Pectin lyase-like superfamily protein | chr1:30153646-30155683 REVERSE LENGTH=444	LOC_Os05g46510.1	protein|polygalacturonase, putative, expressed	IMGA|Medtr5g033680.1	Polygalacturonase chr5 14093504-14090165 H EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0004650|polygalacturonase activity GO:0005515|protein binding	GO:0009505|plant-type cell wall
pt2_01788	A	A1S	Potri.001G172100	Potri.001G172100(AS)	POPTR_0001s17190	sp|Q9XI29|Y1540_ARATH	Uncharacterized protein At1g15400 OS=Arabidopsis thaliana GN=At1g15400 PE=1 SV=2	AT1G15400.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast hits to 82 proteins in 16 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). | chr1:5296402-5296824 REVERSE LENGTH=140	LOC_Os05g46500.1	protein|expressed protein	NA	NA	GO:0008150|biological_process GO:0010260|organ senescence	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_01789	A	A1S	Potri.001G172200	Potri.001G172200(AS)	POPTR_0001s17200	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01790	A	A2S	Potri.001G172300	Potri.001G172300(AS) Potri.003G062100(DS)	POPTR_0001s17210	NA	NA	NA	NA	LOC_Os02g10900.1	protein|NB-ARC domain containing protein, expressed	NA	NA	GO:0006499|N-terminal protein myristoylation GO:0006952|defense response	GO:0043531|ADP binding	NA
pt2_01791	A	A1S	Potri.001G172400	Potri.001G172400(AS)	POPTR_0001s17220	sp|O14111|PSD3_SCHPO	Phosphatidylserine decarboxylase proenzyme 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=psd3 PE=2 SV=2	AT4G25970.1	| Symbols: PSD3 | phosphatidylserine decarboxylase 3 | chr4:13184240-13189139 FORWARD LENGTH=635	LOC_Os01g72940.1	protein|phosphatidylserine decarboxylase, putative, expressed	NA	NA	GO:0006499|N-terminal protein myristoylation GO:0008654|phospholipid biosynthetic process	GO:0004609|phosphatidylserine decarboxylase activity GO:0005509|calcium ion binding	GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0005783|endoplasmic reticulum GO:0009705|plant-type vacuole membrane
pt2_01792	C	C1S	Potri.001G172400	Potri.001G172400(CS)	sp|O14111|PSD3_SCHPO	Phosphatidylserine decarboxylase proenzyme 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=psd3 PE=2 SV=2	AT4G25970.1	| Symbols: PSD3 | phosphatidylserine decarboxylase 3 | chr4:13184240-13189139 FORWARD LENGTH=635	LOC_Os01g72940.1	protein|phosphatidylserine decarboxylase, putative, expressed	NA	NA	GO:0006499|N-terminal protein myristoylation GO:0008654|phospholipid biosynthetic process	GO:0004609|phosphatidylserine decarboxylase activity GO:0005509|calcium ion binding	GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0005783|endoplasmic reticulum GO:0009705|plant-type vacuole membrane
pt2_01793	A	A1A	Potri.001G172400	Potri.001G172400(AA)	POPTR_0001s17240	sp|O14111|PSD3_SCHPO	Phosphatidylserine decarboxylase proenzyme 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=psd3 PE=2 SV=2	AT4G25970.1	| Symbols: PSD3 | phosphatidylserine decarboxylase 3 | chr4:13184240-13189139 FORWARD LENGTH=635	LOC_Os01g72940.1	protein|phosphatidylserine decarboxylase, putative, expressed	NA	NA	GO:0006499|N-terminal protein myristoylation GO:0008654|phospholipid biosynthetic process	GO:0004609|phosphatidylserine decarboxylase activity GO:0005509|calcium ion binding	GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0005783|endoplasmic reticulum GO:0009705|plant-type vacuole membrane
pt2_01794	C	C1S	Potri.001G172400	Potri.001G172400(CS)	sp|O14111|PSD3_SCHPO	Phosphatidylserine decarboxylase proenzyme 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=psd3 PE=2 SV=2	AT4G25970.1	| Symbols: PSD3 | phosphatidylserine decarboxylase 3 | chr4:13184240-13189139 FORWARD LENGTH=635	LOC_Os01g72940.1	protein|phosphatidylserine decarboxylase, putative, expressed	NA	NA	GO:0006499|N-terminal protein myristoylation GO:0008654|phospholipid biosynthetic process	GO:0004609|phosphatidylserine decarboxylase activity GO:0005509|calcium ion binding	GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0005783|endoplasmic reticulum GO:0009705|plant-type vacuole membrane
pt2_01795	A	A1S	Potri.001G172500	Potri.001G172500(AS)	POPTR_0001s17260	NA	NA	AT3G49890.1	| Symbols: | unknown protein; Has 27 Blast hits to 27 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). | chr3:18499296-18500501 FORWARD LENGTH=220	LOC_Os03g10410.1	protein|expressed protein	NA	NA	GO:0006626|protein targeting to mitochondrion GO:0008150|biological_process GO:0009560|embryo sac egg cell differentiation	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_01796	A	A1S	Potri.001G172600	Potri.001G172600(AS)	POPTR_0001s17270	NA	NA	AT3G15690.2	| Symbols: | Single hybrid motif superfamily protein | chr3:5317108-5319435 FORWARD LENGTH=263	NA	NA	IMGA|Medtr5g083520.1	Biotin carboxyl carrier protein of acetyl-CoA carboxylase chr5 35035995-35040845 E EGN_Mt100125 20111014	GO:0030003|cellular cation homeostasis GO:0070838|divalent metal ion transport	NA	GO:0009507|chloroplast
pt2_01797	A	A1S	Potri.001G172700	Potri.001G172700(AS)	POPTR_0001s17280	NA	NA	AT3G15680.1	| Symbols: | Ran BP2/NZF zinc finger-like superfamily protein | chr3:5315437-5316048 FORWARD LENGTH=164	LOC_Os02g10920.5	protein|zinc finger family protein, putative, expressed	NA	NA	GO:0008150|biological_process GO:0009664|plant-type cell wall organization GO:0042545|cell wall modification	GO:0008270|zinc ion binding	GO:0005622|intracellular
pt2_01798	A	A1S	Potri.001G172800	Potri.001G172800(AS)	POPTR_0001s17290	sp|B5X8M4|BRCC3_SALSA	Lys-63-specific deubiquitinase BRCC36 OS=Salmo salar GN=brcc3 PE=2 SV=1	AT1G80210.1	| Symbols: BRCC36A, AtBRCC36A | Mov34/MPN/PAD-1 family protein | chr1:30163357-30165628 REVERSE LENGTH=406	LOC_Os05g46490.1	protein|mov34 family protein, putative, expressed	NA	NA	GO:0006281|DNA repair GO:0006310|DNA recombination	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_01799	A	A1S	Potri.001G172900	Potri.001G172900(AS)	POPTR_0001s17300	NA	NA	AT1G52680.1	| Symbols: | late embryogenesis abundant protein-related / LEA protein-related | chr1:19618419-19618961 REVERSE LENGTH=114	NA	NA	NA	NA	GO:0008150|biological_process GO:0009827|plant-type cell wall modification GO:0009860|pollen tube growth	GO:0003674|molecular_function	NA
pt2_01800	A	A2S	Potri.001G173000	Potri.001G173000(AS) Potri.001G173200(AS)	POPTR_0001s17310	sp|P13939|LEAD7_GOSHI	Late embryogenesis abundant protein D-7 OS=Gossypium hirsutum PE=2 SV=1	AT1G52690.2	| Symbols: | Late embryogenesis abundant protein (LEA) family protein | chr1:19619842-19620589 FORWARD LENGTH=169	NA	NA	NA	NA	GO:0009793|embryo development ending in seed dormancy GO:0009830|cell wall modification involved in abscission	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_01801	A	A2S	Potri.001G173100	Potri.001G173100(AS) Potri.001G173300(AS)	POPTR_0001s17320	sp|P69310|UBIQ_AVESA	Ubiquitin OS=Avena sativa PE=1 SV=1	AT1G15420.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp12 (InterPro:IPR007148); Has 764 Blast hits to 656 proteins in 193 species: Archae - 0; Bacteria - 42; Metazoa - 237; Fungi - 154; Plants - 85; Viruses - 23; Other Eukaryotes - 223 (source: NCBI BLink). | chr1:5301794-5303296 REVERSE LENGTH=278	LOC_Os12g43830.1	protein|NUC189 domain containing protein, expressed	IMGA|Medtr5g033960.1	Ubiquitin chr5 14250866-14251520 F EGN_Mt100125 20111014	GO:0006626|protein targeting to mitochondrion GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_01802	A	A1S	Potri.001G173400	Potri.001G173400(AS)	POPTR_0001s17330	NA	NA	AT3G25910.1	| Symbols: | Protein of unknown function (DUF1644) | chr3:9489836-9490954 FORWARD LENGTH=372	LOC_Os01g42700.4	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_01803	A	A2S	Potri.001G173500	Potri.001G173500(AS) Potri.003G060500(BS)	POPTR_0001s17340	sp|Q15269|PWP2_HUMAN	Periodic tryptophan protein 2 homolog OS=Homo sapiens GN=PWP2 PE=1 SV=2	AT1G15440.1	| Symbols: PWP2, ATPWP2 | periodic tryptophan protein 2 | chr1:5306159-5309460 REVERSE LENGTH=900	LOC_Os05g44320.1	protein|WD domain, G-beta repeat domain containing protein, expressed	IMGA|contig_53197_1.1	Wd-repeat protein contig_53197 137-4865 E PREDN 20111014	GO:0001510|RNA methylation GO:0006406|mRNA export from nucleus GO:0006606|protein import into nucleus GO:0008150|biological_process GO:0009220|pyrimidine ribonucleotide biosynthetic process	GO:0000166|nucleotide binding	GO:0005634|nucleus GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_01804	A	A1S	Potri.001G173600	Potri.001G173600(AS)	POPTR_0001s17350	sp|Q9LUI3|TSO1_ARATH	CRC domain-containing protein TSO1 OS=Arabidopsis thaliana GN=TSO1 PE=1 SV=1	AT3G22780.1	| Symbols: TSO1, ATTSO1 | Tesmin/TSO1-like CXC domain-containing protein | chr3:8048927-8052058 FORWARD LENGTH=695	LOC_Os07g07974.1	protein|tesmin/TSO1-like CXC domain containing protein, expressed	IMGA|Medtr5g006530.1	Lin-54-like protein chr5 723130-718351 E EGN_Mt100125 20111014	GO:0000226|microtubule cytoskeleton organization GO:0006260|DNA replication GO:0006306|DNA methylation GO:0006310|DNA recombination GO:0006346|methylation-dependent chromatin silencing GO:0007020|microtubule nucleation GO:0007126|meiosis GO:0008283|cell proliferation GO:0009909|regulation of flower development GO:0009934|regulation of meristem structural organization GO:0010332|response to gamma radiation GO:0016458|gene silencing GO:0016570|histone modification GO:0031048|chromatin silencing by small RNA GO:0032204|regulation of telomere maintenance GO:0034968|histone lysine methylation GO:0043247|telomere maintenance in response to DNA damage GO:0048444|floral organ morphogenesis GO:0048449|floral organ formation GO:0051225|spindle assembly GO:0051302|regulation of cell division GO:0051567|histone H3-K9 methylation	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_01805	A	A1S	Potri.001G173700	Potri.001G173700(AS)	POPTR_0001s17360	sp|Q9QYL8|LYPA2_RAT	Acyl-protein thioesterase 2 OS=Rattus norvegicus GN=Lypla2 PE=1 SV=1	AT3G15650.2	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr3:5306006-5307764 FORWARD LENGTH=274	LOC_Os01g07960.1	protein|acyl-protein thioesterase, putative, expressed	IMGA|contig_55215_1.1	Acyl-protein thioesterase contig_55215 364-5917 F PREDN 20111014	NA	GO:0004091|carboxylesterase activity GO:0016787|hydrolase activity	GO:0005737|cytoplasm
pt2_01806	A	A2S	Potri.001G173800	Potri.001G173800(AS) Potri.003G060100(DS)	POPTR_0001s17370	sp|Q9SSB8|CX5B2_ARATH	Cytochrome c oxidase subunit 5b-2, mitochondrial OS=Arabidopsis thaliana GN=COX5B-2 PE=2 SV=1	AT1G80230.1	| Symbols: | Rubredoxin-like superfamily protein | chr1:30169784-30170999 REVERSE LENGTH=171	LOC_Os06g05080.1	protein|cytochrome c oxidase subunit 5B, mitochondrial precursor, putative, expressed	IMGA|contig_52983_1.1	Cytochrome c oxidase subunit Vb contig_52983 661-2156 E PREDN 20111014	NA	GO:0004129|cytochrome-c oxidase activity	GO:0005739|mitochondrion GO:0005740|mitochondrial envelope
pt2_01807	A	A2S	Potri.001G173800	Potri.001G173800(AS) Potri.003G060100(BS)	POPTR_0001s17370	sp|Q9SSB8|CX5B2_ARATH	Cytochrome c oxidase subunit 5b-2, mitochondrial OS=Arabidopsis thaliana GN=COX5B-2 PE=2 SV=1	AT1G80230.1	| Symbols: | Rubredoxin-like superfamily protein | chr1:30169784-30170999 REVERSE LENGTH=171	LOC_Os06g05080.1	protein|cytochrome c oxidase subunit 5B, mitochondrial precursor, putative, expressed	IMGA|contig_52983_1.1	Cytochrome c oxidase subunit Vb contig_52983 661-2156 E PREDN 20111014	NA	GO:0004129|cytochrome-c oxidase activity	GO:0005739|mitochondrion GO:0005740|mitochondrial envelope
pt2_01808	A	A1S	Potri.001G173900	Potri.001G173900(AS)	POPTR_0001s17380	NA	NA	AT4G32440.1	| Symbols: | Plant Tudor-like RNA-binding protein | chr4:15657295-15658692 FORWARD LENGTH=377	LOC_Os02g11000.2	protein|agenet domain containing protein, putative, expressed	NA	NA	GO:0008150|biological_process GO:0010200|response to chitin	GO:0003723|RNA binding	GO:0005634|nucleus
pt2_01809	A	A1S	Potri.001G174000	Potri.001G174000(AS)	POPTR_0001s17390	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01810	A	A1S	Potri.001G174100	Potri.001G174100(AS)	POPTR_0001s17400	sp|Q9FNP1|PEX1_ARATH	Peroxisome biogenesis protein 1 OS=Arabidopsis thaliana GN=PEX1 PE=2 SV=2	AT5G08470.1	| Symbols: PEX1 | peroxisome 1 | chr5:2735925-2742731 FORWARD LENGTH=1130	LOC_Os08g44240.1	protein|AAA-type ATPase family protein, putative, expressed	IMGA|Medtr1g083330.1	26S protease regulatory subunit 6A-like protein chr1 21592984-21597408 F EGN_Mt100125 20111014	GO:0006635|fatty acid beta-oxidation GO:0006950|response to stress GO:0007031|peroxisome organization GO:0016558|protein import into peroxisome matrix	GO:0000166|nucleotide binding GO:0005515|protein binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity	GO:0005886|plasma membrane
pt2_01811	A	A2S	Potri.001G174200	Potri.001G174200(AS) Potri.001G174100(AA)	POPTR_0001s17410	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01812	A	A1S	Potri.001G174300	Potri.001G174300(AS)	POPTR_0001s17420	NA	NA	AT1G52720.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15630.1); Has 61 Blast hits to 61 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:19641007-19641360 FORWARD LENGTH=117	LOC_Os01g07970.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009536|plastid
pt2_01813	A	A1S	Potri.001G174400	Potri.001G174400(AS)	POPTR_0001s17430	NA	NA	AT5G25460.1	| Symbols: | Protein of unknown function, DUF642 | chr5:8863430-8865394 FORWARD LENGTH=369	LOC_Os01g42520.1	protein|expressed protein	IMGA|contig_51971_1.1	Unknown protein contig_51971 824-2968 E PREDN 20111014	GO:0010015|root morphogenesis GO:0080167|response to karrikin	GO:0003674|molecular_function	GO:0005576|extracellular region GO:0009505|plant-type cell wall GO:0009506|plasmodesma
pt2_01814	C	C1S	Potri.001G174500	Potri.001G174500(CS)	sp|Q9XI23|BOR4_ARATH	Boron transporter 4 OS=Arabidopsis thaliana GN=BOR4 PE=2 SV=1	AT1G15460.1	| Symbols: ATBOR4, BOR4 | HCO3- transporter family | chr1:5310196-5313376 REVERSE LENGTH=683	LOC_Os01g08020.1	protein|boron transporter protein, putative, expressed	NA	NA	GO:0006820|anion transport GO:0046713|borate transport GO:0080029|cellular response to boron-containing substance levels	GO:0005452|inorganic anion exchanger activity GO:0015301|anion:anion antiporter activity GO:0080139|borate efflux transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_01815	A	A1S	Potri.001G174600	Potri.001G174600(AS)	POPTR_0001s17450	sp|Q54LT8|STRAP_DICDI	Serine-threonine kinase receptor-associated protein OS=Dictyostelium discoideum GN=strap PE=3 SV=1	AT1G52730.1	| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr1:19642866-19644978 FORWARD LENGTH=343	LOC_Os02g11060.1	protein|WD domain, G-beta repeat domain containing protein, expressed	IMGA|Medtr5g022690.1	U4/U6 small nuclear ribonucleoprotein PRP4-like protein chr5 8715534-8712947 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0000166|nucleotide binding	GO:0005737|cytoplasm GO:0005829|cytosol GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_01816	A	A1S	Potri.001G174700	Potri.001G174700(AS)	POPTR_0001s17460	NA	NA	AT3G15605.4	| Symbols: | nucleic acid binding | chr3:5288291-5290941 FORWARD LENGTH=481	LOC_Os01g42460.1	protein|BAH domain containing protein, expressed	IMGA|Medtr1g008670.2	hypothetical protein chr1 1588201-1591528 F EGN_Mt100125 20111014	GO:0006333|chromatin assembly or disassembly GO:0008150|biological_process	GO:0003676|nucleic acid binding GO:0003677|DNA binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01817	A	A5S	Potri.001G174800	Potri.001G174800(AS) Potri.012G010400(BS) Potri.004G149700(BS) Potri.005G009200(BS) Potri.001G422400(BS)	POPTR_0001s17470	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01818	A	A1S	Potri.001G174900	Potri.001G174900(AS)	POPTR_0001s17480	NA	NA	AT1G80280.1	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr1:30183839-30186141 REVERSE LENGTH=647	LOC_Os01g45960.1	protein|hydrolase, alpha/beta fold family domain containing protein, expressed	NA	NA	NA	GO:0016787|hydrolase activity	GO:0005737|cytoplasm
pt2_01819	G	G1	NA	NA	POPTR_0001s17490	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01820	A	A1S	Potri.001G175000	Potri.001G175000(AS)	POPTR_0001s17500	sp|Q99685|MGLL_HUMAN	Monoglyceride lipase OS=Homo sapiens GN=MGLL PE=1 SV=2	AT1G52760.1	| Symbols: LysoPL2 | lysophospholipase 2 | chr1:19651378-19652576 FORWARD LENGTH=332	LOC_Os02g11720.1	protein|lipase, putative, expressed	IMGA|Medtr1g095110.1	Monoglyceride lipase chr1 27112088-27110884 E EGN_Mt100125 20111014	GO:0006979|response to oxidative stress GO:0010043|response to zinc ion GO:0042542|response to hydrogen peroxide GO:0046686|response to cadmium ion	GO:0003846|2-acylglycerol O-acyltransferase activity GO:0004622|lysophospholipase activity GO:0016787|hydrolase activity	GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0009507|chloroplast
pt2_01821	C	C1S	Potri.001G175100	Potri.001G175100(CS)	sp|Q9LNG5|PPP7L_ARATH	Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana GN=At1g48120 PE=2 SV=1	AT1G48120.1	| Symbols: | hydrolases;protein serine/threonine phosphatases | chr1:17774238-17779624 REVERSE LENGTH=1340	LOC_Os01g53660.1	protein|transposon protein, putative, unclassified, expressed	NA	NA	NA	GO:0004722|protein serine/threonine phosphatase activity GO:0016787|hydrolase activity	GO:0005634|nucleus
pt2_01822	A	A1S	Potri.001G175200	Potri.001G175200(AS)	POPTR_0001s17520	sp|O24381|TLC1_SOLTU	Plastidic ATP/ADP-transporter OS=Solanum tuberosum PE=2 SV=2	AT1G80300.1	| Symbols: NTT1, ATNTT1 | nucleotide transporter 1 | chr1:30191954-30194280 FORWARD LENGTH=624	LOC_Os02g11740.1	protein|plastidic ATP/ADP-transporter, putative, expressed	NA	NA	NA	GO:0005471|ATP:ADP antiporter activity GO:0005524|ATP binding	GO:0009507|chloroplast GO:0009536|plastid GO:0009941|chloroplast envelope GO:0016020|membrane GO:0016021|integral to membrane
pt2_01823	A	A1S	Potri.001G175300	Potri.001G175300(AS)	POPTR_0001s17530	NA	NA	AT2G04865.1	| Symbols: | Aminotransferase-like, plant mobile domain family protein | chr2:1712149-1714599 FORWARD LENGTH=667	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01824	A	A1S	Potri.001G175400	Potri.001G175400(AS)	POPTR_0001s17540	sp|Q9FMF5|RPT3_ARATH	Root phototropism protein 3 OS=Arabidopsis thaliana GN=RPT3 PE=1 SV=2	AT1G52770.1	| Symbols: | Phototropic-responsive NPH3 family protein | chr1:19656009-19657546 FORWARD LENGTH=454	LOC_Os05g08530.1	protein|phototropic-responsive NPH3 family protein, putative, expressed	IMGA|Medtr5g032780.1	BTB/POZ domain-containing protein chr5 13701861-13705690 E EGN_Mt100125 20111014	GO:0009416|response to light stimulus	GO:0004871|signal transducer activity	GO:0005575|cellular_component GO:0005886|plasma membrane
pt2_01825	A	A1S	Potri.001G175500	Potri.001G175500(AS)	POPTR_0001s17550	NA	NA	AT3G15550.1	| Symbols: | unknown protein; Has 25732 Blast hits to 16979 proteins in 961 species: Archae - 144; Bacteria - 1801; Metazoa - 12681; Fungi - 1868; Plants - 912; Viruses - 94; Other Eukaryotes - 8232 (source: NCBI BLink). | chr3:5267351-5270095 FORWARD LENGTH=729	LOC_Os01g08150.1	protein|expressed protein	NA	NA	GO:0000226|microtubule cytoskeleton organization GO:0000724|double-strand break repair via homologous recombination GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0006346|methylation-dependent chromatin silencing GO:0008150|biological_process GO:0031047|gene silencing by RNA GO:0031048|chromatin silencing by small RNA GO:0031507|heterochromatin assembly GO:0045787|positive regulation of cell cycle GO:0048451|petal formation GO:0048453|sepal formation GO:0051567|histone H3-K9 methylation	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_01826	A	A1S	Potri.001G175600	Potri.001G175600(AS)	POPTR_0001s17560	NA	NA	AT1G52780.1	| Symbols: | Protein of unknown function (DUF2921) | chr1:19658846-19662025 FORWARD LENGTH=1059	LOC_Os01g08170.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005576|extracellular region GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0016020|membrane
pt2_01827	A	A1S	Potri.001G175700	Potri.001G175700(AS)	POPTR_0001s17570	sp|Q76CU2|PDR1_TOBAC	Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum GN=PDR1 PE=2 SV=1	AT1G15520.1	| Symbols: PDR12, ATPDR12, ABCG40, ATABCG40 | pleiotropic drug resistance 12 | chr1:5331993-5338175 REVERSE LENGTH=1423	LOC_Os02g11760.1	protein|pleiotropic drug resistance protein, putative, expressed	IMGA|Medtr5g070320.1	Pleiotropic drug resistance ABC transporter family protein chr5 28781263-28793818 H EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0002831|regulation of response to biotic stimulus GO:0006612|protein targeting to membrane GO:0006855|drug transmembrane transport GO:0007165|signal transduction GO:0009414|response to water deprivation GO:0009595|detection of biotic stimulus GO:0009607|response to biotic stimulus GO:0009697|salicylic acid biosynthetic process GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009751|response to salicylic acid stimulus GO:0009753|response to jasmonic acid stimulus GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010193|response to ozone GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0015692|lead ion transport GO:0031348|negative regulation of defense response GO:0042538|hyperosmotic salinity response GO:0042742|defense response to bacterium GO:0043069|negative regulation of programmed cell death GO:0043900|regulation of multi-organism process GO:0046865|terpenoid transport GO:0050832|defense response to fungus GO:0080168|abscisic acid transport	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0005886|plasma membrane
pt2_01828	A	A1S	Potri.001G175800	Potri.001G175800(AS)	POPTR_0001s17580	sp|Q9C6I4|G2OX7_ARATH	Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=1	AT1G52820.1	| Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr1:19669216-19670321 FORWARD LENGTH=317	LOC_Os08g32170.1	protein|oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed	IMGA|Medtr5g027230.1	1-aminocyclopropane-1-carboxylate oxidase chr5 11053638-11057458 H EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	GO:0005737|cytoplasm
pt2_01829	A	A2S	Potri.001G175900	Potri.001G175900(AS) Potri.001G175800(AS)	POPTR_0001s17610	sp|O04707|GAO1A_WHEAT	Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN=GA20ox1A PE=2 SV=1	AT1G52820.1	| Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr1:19669216-19670321 FORWARD LENGTH=317	LOC_Os08g32170.1	protein|oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed	IMGA|Medtr5g027230.1	1-aminocyclopropane-1-carboxylate oxidase chr5 11053638-11057458 H EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_01830	A	A1S	Potri.001G176000	Potri.001G176000(AS)	POPTR_0001s17620	sp|O04706|GAO1B_WHEAT	Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN=GA20ox1B PE=2 SV=1	AT1G52790.1	| Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr1:19662194-19663301 REVERSE LENGTH=310	LOC_Os08g32170.1	protein|oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed	IMGA|Medtr5g027230.1	1-aminocyclopropane-1-carboxylate oxidase chr5 11053638-11057458 H EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_01831	A	A1S	Potri.001G176100	Potri.001G176100(AS)	POPTR_0001s17630	sp|O04705|GAO1D_WHEAT	Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN=GA20ox1D PE=1 SV=1	AT1G52800.1	| Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr1:19664044-19665362 FORWARD LENGTH=314	LOC_Os08g32170.1	protein|oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed	IMGA|Medtr5g027230.1	1-aminocyclopropane-1-carboxylate oxidase chr5 11053638-11057458 H EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_01832	A	A1S	Potri.001G176200	Potri.001G176200(AS)	POPTR_0001s17640	sp|Q39110|GAOX1_ARATH	Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=20ox1 PE=2 SV=2	AT1G52820.1	| Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr1:19669216-19670321 FORWARD LENGTH=317	LOC_Os08g32170.1	protein|oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed	IMGA|Medtr5g027230.1	1-aminocyclopropane-1-carboxylate oxidase chr5 11053638-11057458 H EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	GO:0005737|cytoplasm
pt2_01833	A	A1S	Potri.001G176300	Potri.001G176300(AS)	POPTR_0001s17650	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01834	A	A1S	Potri.001G176400	Potri.001G176400(AS)	POPTR_0001s17660	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01835	A	A1S	Potri.001G176500	Potri.001G176500(AS)	POPTR_0001s17670	sp|Q39110|GAOX1_ARATH	Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=20ox1 PE=2 SV=2	AT1G52800.1	| Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr1:19664044-19665362 FORWARD LENGTH=314	LOC_Os08g32170.1	protein|oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed	IMGA|Medtr5g025090.1	1-aminocyclopropane-1-carboxylate oxidase chr5 9896148-9893858 E EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_01836	A	A1S	Potri.001G176600	Potri.001G176600(AS)	POPTR_0001s17680	sp|Q39103|G3OX1_ARATH	Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA4 PE=1 SV=2	AT1G15550.1	| Symbols: GA4, ATGA3OX1, GA3OX1 | gibberellin 3-oxidase 1 | chr1:5344569-5346078 REVERSE LENGTH=358	LOC_Os01g08220.1	protein|gibberellin 3-beta-dioxygenase 2-2, putative, expressed	IMGA|Medtr5g055680.1	Protein SRG1 chr5 22384306-22387839 F EGN_Mt100125 20111014	GO:0009639|response to red or far red light GO:0009686|gibberellin biosynthetic process GO:0009739|response to gibberellin stimulus GO:0009740|gibberellic acid mediated signaling pathway GO:0010114|response to red light GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0008134|transcription factor binding GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors GO:0016707|gibberellin 3-beta-dioxygenase activity	GO:0005737|cytoplasm
pt2_01837	R	R	NA	NA	POPTR_0001s17690	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01838	A	A1S	Potri.001G176800	Potri.001G176800(AS)	POPTR_0001s17700	NA	NA	AT4G14746.1	| Symbols: | CONTAINS InterPro DOMAIN/s: EGF-like (InterPro:IPR006210); Has 259 Blast hits to 234 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 184; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). | chr4:8462720-8464326 REVERSE LENGTH=212	LOC_Os11g37210.1	protein|MTN26L5 - MtN26 family protein precursor, expressed	NA	NA	GO:0008150|biological_process	NA	GO:0031225|anchored to membrane
pt2_01839	A	A1S	Potri.001G176900	Potri.001G176900(AS)	POPTR_0001s17710	sp|Q9SEX2|KTNA1_ARATH	Katanin p60 ATPase-containing subunit OS=Arabidopsis thaliana GN=AAA1 PE=1 SV=1	AT1G80350.1	| Symbols: ERH3, AAA1, FRA2, LUE1, ATKTN1, KTN1, FRC2, BOT1, FTR | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:30205499-30208050 REVERSE LENGTH=523	LOC_Os01g49000.1	protein|katanin p60 ATPase-containing subunit, putative, expressed	IMGA|Medtr1g088750.1	Katanin p60 ATPase-containing subunit A-like protein chr1 24184365-24173384 E EGN_Mt100125 20111014	GO:0000226|microtubule cytoskeleton organization GO:0009825|multidimensional cell growth GO:0010091|trichome branching GO:0043622|cortical microtubule organization	GO:0000166|nucleotide binding GO:0005515|protein binding GO:0005524|ATP binding GO:0017111|nucleoside-triphosphatase activity	GO:0005737|cytoplasm
pt2_01840	A	A1S	Potri.001G177000	Potri.001G177000(AS)	POPTR_0001s17720	sp|O67781|AAT_AQUAE	Aspartate aminotransferase OS=Aquifex aeolicus (strain VF5) GN=aspC PE=3 SV=1	AT1G80360.1	| Symbols: | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein | chr1:30208736-30210643 REVERSE LENGTH=394	LOC_Os01g08270.1	protein|aminotransferase, classes I and II, domain containing protein, expressed	NA	NA	GO:0006530|asparagine catabolic process GO:0009058|biosynthetic process GO:0019465|aspartate transamidation GO:0019554|glutamate catabolic process to oxaloacetate	GO:0003824|catalytic activity GO:0008483|transaminase activity GO:0016740|transferase activity GO:0030170|pyridoxal phosphate binding	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_01841	A	A1S	Potri.001G177100	Potri.001G177100(AS)	POPTR_0001s17730	sp|Q9C968|CCA24_ARATH	Cyclin-A2-4 OS=Arabidopsis thaliana GN=CYCA2-4 PE=2 SV=1	AT1G80370.1	| Symbols: CYCA2;4 | Cyclin A2;4 | chr1:30214694-30216861 FORWARD LENGTH=461	LOC_Os12g31810.1	protein|cyclin, putative, expressed	IMGA|Medtr1g011470.1	Cyclin chr1 2363745-2358343 H EGN_Mt100125 20111014	GO:0000079|regulation of cyclin-dependent protein kinase activity GO:0006275|regulation of DNA replication GO:0008283|cell proliferation GO:0010374|stomatal complex development GO:0010389|regulation of G2/M transition of mitotic cell cycle GO:0042023|DNA endoreduplication GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0043248|proteasome assembly GO:0051510|regulation of unidimensional cell growth GO:0051726|regulation of cell cycle GO:0051788|response to misfolded protein	GO:0016538|cyclin-dependent protein kinase regulator activity GO:0019901|protein kinase binding	GO:0005634|nucleus
pt2_01842	C	C1S	Potri.001G177200	Potri.001G177200(CS)	sp|Q9ZQE5|PP153_ARATH	Pentatricopeptide repeat-containing protein At2g15690 OS=Arabidopsis thaliana GN=PCMP-H66 PE=2 SV=2	AT2G15690.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr2:6831855-6833594 REVERSE LENGTH=579	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_01843	A	A2S	Potri.001G177300	Potri.001G177300(AS) Potri.003G058500(DS)	POPTR_0001s17750	sp|Q944I4|GLYK_ARATH	D-glycerate 3-kinase, chloroplastic OS=Arabidopsis thaliana GN=GLYK PE=1 SV=2	AT1G80380.2	| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:30217332-30219784 FORWARD LENGTH=456	LOC_Os01g48990.2	protein|uncharacterized kinase mug58, putative, expressed	NA	NA	GO:0008152|metabolic process GO:0009853|photorespiration	GO:0005524|ATP binding GO:0008887|glycerate kinase activity GO:0016301|kinase activity	GO:0005634|nucleus GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope
pt2_01844	A	A1S	Potri.001G177300	Potri.001G177300(AS)	POPTR_0001s17760	sp|Q944I4|GLYK_ARATH	D-glycerate 3-kinase, chloroplastic OS=Arabidopsis thaliana GN=GLYK PE=1 SV=2	AT1G80380.2	| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:30217332-30219784 FORWARD LENGTH=456	LOC_Os01g48990.2	protein|uncharacterized kinase mug58, putative, expressed	NA	NA	GO:0008152|metabolic process GO:0009853|photorespiration	GO:0005524|ATP binding GO:0008887|glycerate kinase activity GO:0016301|kinase activity	GO:0005634|nucleus GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope
pt2_01845	A	A1S	Potri.001G177400	Potri.001G177400(AS)	POPTR_0001s17770	sp|O24407|IAA16_ARATH	Auxin-responsive protein IAA16 OS=Arabidopsis thaliana GN=IAA16 PE=1 SV=1	AT3G04730.1	| Symbols: IAA16 | indoleacetic acid-induced protein 16 | chr3:1288993-1290415 REVERSE LENGTH=236	LOC_Os03g43400.1	protein|OsIAA11 - Auxin-responsive Aux/IAA gene family member, expressed	IMGA|Medtr1g093350.1	Auxin-induced protein chr1 26247246-26248612 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009733|response to auxin stimulus GO:0009734|auxin mediated signaling pathway	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0042802|identical protein binding GO:0046983|protein dimerization activity	GO:0000502|proteasome complex GO:0005634|nucleus GO:0008180|signalosome GO:0019005|SCF ubiquitin ligase complex
pt2_01846	A	A1S	Potri.001G177500	Potri.001G177500(AS)	POPTR_0001s17780	sp|P13088|AUX22_SOYBN	Auxin-induced protein AUX22 OS=Glycine max GN=AUX22 PE=2 SV=1	AT3G15540.1	| Symbols: IAA19, MSG2 | indole-3-acetic acid inducible 19 | chr3:5264100-5265378 FORWARD LENGTH=197	LOC_Os03g43400.1	protein|OsIAA11 - Auxin-responsive Aux/IAA gene family member, expressed	IMGA|Medtr1g093350.1	Auxin-induced protein chr1 26247246-26248612 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009630|gravitropism GO:0009638|phototropism GO:0009733|response to auxin stimulus GO:0009741|response to brassinosteroid stimulus GO:0048527|lateral root development GO:0080086|stamen filament development	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_01847	C	C2S	Potri.001G177900	Potri.001G177900(CS) Potri.001G177600(CS)	sp|Q9SQI3|FATB_GOSHI	Palmitoyl-acyl carrier protein thioesterase, chloroplastic OS=Gossypium hirsutum GN=FATB1 PE=1 SV=1	AT1G08510.1	| Symbols: FATB | fatty acyl-ACP thioesterases B | chr1:2691546-2693409 REVERSE LENGTH=412	LOC_Os11g43820.1	protein|myristoyl-acyl carrier protein thioesterase, chloroplast precursor, putative, expressed	NA	NA	GO:0006633|fatty acid biosynthetic process GO:0008152|metabolic process	GO:0000036|ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process GO:0016297|acyl-[acyl-carrier-protein] hydrolase activity GO:0016790|thiolester hydrolase activity	GO:0009507|chloroplast GO:0009536|plastid
pt2_01848	A	A2S	Potri.001G177700	Potri.001G177700(AS) Potri.001G178000(BS)	POPTR_0001s17800	sp|Q5R4J9|NAA15_PONAB	N-alpha-acetyltransferase 15, NatA auxiliary subunit OS=Pongo abelii GN=NAA15 PE=2 SV=1	AT1G80410.1	| Symbols: EMB2753 | tetratricopeptide repeat (TPR)-containing protein | chr1:30227963-30234832 REVERSE LENGTH=897	LOC_Os01g43030.1	protein|tetratricopeptide repeat domain containing protein, expressed	NA	NA	GO:0009793|embryo development ending in seed dormancy GO:0010228|vegetative to reproductive phase transition of meristem	NA	GO:0005634|nucleus GO:0005829|cytosol GO:0009506|plasmodesma GO:0016020|membrane
pt2_01849	A	A1S	Potri.001G177800	Potri.001G177800(AS)	POPTR_0001s17810	sp|Q9DBB4|NAA16_MOUSE	N-alpha-acetyltransferase 16, NatA auxiliary subunit OS=Mus musculus GN=Naa16 PE=2 SV=1	AT1G80410.1	| Symbols: EMB2753 | tetratricopeptide repeat (TPR)-containing protein | chr1:30227963-30234832 REVERSE LENGTH=897	LOC_Os01g43030.2	protein|tetratricopeptide repeat domain containing protein, expressed	NA	NA	GO:0009793|embryo development ending in seed dormancy GO:0010228|vegetative to reproductive phase transition of meristem	NA	GO:0005634|nucleus GO:0005829|cytosol GO:0009506|plasmodesma GO:0016020|membrane
pt2_01850	A	A1S	Potri.001G177900	Potri.001G177900(AS)	POPTR_0001s17815	sp|Q9SQI3|FATB_GOSHI	Palmitoyl-acyl carrier protein thioesterase, chloroplastic OS=Gossypium hirsutum GN=FATB1 PE=1 SV=1	AT1G08510.1	| Symbols: FATB | fatty acyl-ACP thioesterases B | chr1:2691546-2693409 REVERSE LENGTH=412	LOC_Os11g43820.1	protein|myristoyl-acyl carrier protein thioesterase, chloroplast precursor, putative, expressed	NA	NA	GO:0006633|fatty acid biosynthetic process GO:0008152|metabolic process	GO:0000036|ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process GO:0016297|acyl-[acyl-carrier-protein] hydrolase activity GO:0016790|thiolester hydrolase activity	GO:0009507|chloroplast GO:0009536|plastid
pt2_01851	G	G3	NA	NA	POPTR_0001s17820	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01852	A	A2S	Potri.001G178000	Potri.001G178000(AS) Potri.001G177700(BS)	POPTR_0001s17830	sp|Q6N069|NAA16_HUMAN	N-alpha-acetyltransferase 16, NatA auxiliary subunit OS=Homo sapiens GN=NAA16 PE=1 SV=2	AT1G80410.1	| Symbols: EMB2753 | tetratricopeptide repeat (TPR)-containing protein | chr1:30227963-30234832 REVERSE LENGTH=897	LOC_Os01g43030.1	protein|tetratricopeptide repeat domain containing protein, expressed	NA	NA	GO:0009793|embryo development ending in seed dormancy GO:0010228|vegetative to reproductive phase transition of meristem	NA	GO:0005634|nucleus GO:0005829|cytosol GO:0009506|plasmodesma GO:0016020|membrane
pt2_01853	A	A1S	Potri.001G178100	Potri.001G178100(AS)	POPTR_0001s17840	sp|Q9ESZ0|XRCC1_RAT	DNA repair protein XRCC1 OS=Rattus norvegicus GN=Xrcc1 PE=2 SV=2	AT1G80420.3	| Symbols: ATXRCC1 | BRCT domain-containing DNA repair protein | chr1:30235444-30237163 REVERSE LENGTH=353	LOC_Os06g05190.1	protein|BRCA1 C Terminus domain containing protein, expressed	NA	NA	GO:0006281|DNA repair	GO:0003713|transcription coactivator activity	GO:0005622|intracellular GO:0005634|nucleus
pt2_01854	A	A1S	Potri.001G178200	Potri.001G178200(AS)	POPTR_0001s17850	NA	NA	AT1G15660.1	| Symbols: CENP-C | centromere protein C | chr1:5381230-5385057 FORWARD LENGTH=705	LOC_Os01g43050.1	protein|CENP-C1, putative, expressed	NA	NA	GO:0000280|nuclear division GO:0006260|DNA replication GO:0006275|regulation of DNA replication GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0008150|biological_process GO:0008283|cell proliferation GO:0010389|regulation of G2/M transition of mitotic cell cycle GO:0016572|histone phosphorylation GO:0042023|DNA endoreduplication GO:0051225|spindle assembly GO:0051567|histone H3-K9 methylation	GO:0003674|molecular_function	GO:0000775|chromosome, centromeric region GO:0005634|nucleus
pt2_01855	A	A1S	Potri.001G178300	Potri.001G178300(AS)	POPTR_0001s17860	sp|Q9M8L2|FBK30_ARATH	F-box/kelch-repeat protein At1g80440 OS=Arabidopsis thaliana GN=At1g80440 PE=2 SV=1	AT1G80440.1	| Symbols: | Galactose oxidase/kelch repeat superfamily protein | chr1:30241763-30242827 FORWARD LENGTH=354	LOC_Os06g39370.1	protein|OsFBK16 - F-box domain and kelch repeat containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01856	A	A1S	Potri.001G178400	Potri.001G178400(AS)	POPTR_0001s17870	NA	NA	NA	NA	LOC_Os07g07890.1	protein|expressed protein	NA	NA	NA	NA	NA
pt2_01857	A	A1S	Potri.001G178500	Potri.001G178500(AS)	POPTR_0001s17880	sp|Q9LMR5|FK126_ARATH	F-box/kelch-repeat protein At1g15670 OS=Arabidopsis thaliana GN=At1g15670 PE=2 SV=1	AT1G15670.1	| Symbols: | Galactose oxidase/kelch repeat superfamily protein | chr1:5390119-5391198 FORWARD LENGTH=359	LOC_Os06g39370.1	protein|OsFBK16 - F-box domain and kelch repeat containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01858	B	B1S	Potri.001G178700	Potri.001G178700(BS)	POPTR_0001s17890	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01859	A	A1S	Potri.001G178800	Potri.001G178800(AS)	POPTR_0001s17900	sp|O87690|CBIX_BACME	Sirohydrochlorin cobaltochelatase OS=Bacillus megaterium GN=cbiX PE=1 SV=1	AT1G50170.1	| Symbols: ATSIRB, SIRB | sirohydrochlorin ferrochelatase B | chr1:18582087-18583514 FORWARD LENGTH=225	LOC_Os02g19440.1	protein|sirohydrochlorin ferrochelatase, putative, expressed	NA	NA	GO:0006979|response to oxidative stress GO:0009236|cobalamin biosynthetic process GO:0019354|siroheme biosynthetic process	GO:0016829|lyase activity GO:0046872|metal ion binding GO:0051266|sirohydrochlorin ferrochelatase activity	GO:0009507|chloroplast
pt2_01860	A	A1S	Potri.001G178900	Potri.001G178900(AS)	POPTR_0001s17910	NA	NA	AT1G80000.2	| Symbols: | CASC3/Barentsz eIF4AIII binding | chr1:30093195-30096742 FORWARD LENGTH=605	LOC_Os01g41190.2	protein|glycine-rich protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_01861	A	A1S	Potri.001G179000	Potri.001G179000(AS)	POPTR_0001s17920	NA	NA	AT3G15940.2	| Symbols: | UDP-Glycosyltransferase superfamily protein | chr3:5393632-5396187 REVERSE LENGTH=697	LOC_Os01g15780.1	protein|glycosyl transferase, group 1 domain containing protein, expressed	NA	NA	GO:0001666|response to hypoxia GO:0009058|biosynthetic process GO:0019375|galactolipid biosynthetic process	GO:0016757|transferase activity, transferring glycosyl groups	GO:0005794|Golgi apparatus
pt2_01862	A	A1S	Potri.001G179100	Potri.001G179100(AS)	POPTR_0001s17930	NA	NA	AT1G52380.1	| Symbols: | NUP50 (Nucleoporin 50 kDa) protein | chr1:19509979-19511301 FORWARD LENGTH=440	LOC_Os05g28190.1	protein|ranBP1 domain containing protein, expressed	NA	NA	GO:0046907|intracellular transport	GO:0005515|protein binding	GO:0005634|nucleus GO:0005643|nuclear pore GO:0005829|cytosol
pt2_01863	A	A2S	Potri.001G179200	Potri.001G179200(AS) Potri.003G056300(DS)	POPTR_0001s17940	sp|Q9C827|COB22_ARATH	Coatomer subunit beta'-2 OS=Arabidopsis thaliana GN=At1g52360 PE=2 SV=1	AT1G52360.1	| Symbols: | Coatomer, beta' subunit | chr1:19499282-19505397 FORWARD LENGTH=926	LOC_Os02g11830.2	protein|coatomer subunit beta, putative, expressed	IMGA|Medtr5g022690.1	U4/U6 small nuclear ribonucleoprotein PRP4-like protein chr5 8715534-8712947 H EGN_Mt100125 20111014	GO:0006094|gluconeogenesis GO:0006886|intracellular protein transport GO:0007010|cytoskeleton organization GO:0010498|proteasomal protein catabolic process GO:0016192|vesicle-mediated transport	GO:0005198|structural molecule activity	GO:0005737|cytoplasm GO:0005829|cytosol GO:0030117|membrane coat GO:0030126|COPI vesicle coat
pt2_01864	A	A1S	Potri.001G179200	Potri.001G179200(AS)	POPTR_0001s17940	sp|Q9C827|COB22_ARATH	Coatomer subunit beta'-2 OS=Arabidopsis thaliana GN=At1g52360 PE=2 SV=1	AT1G52360.1	| Symbols: | Coatomer, beta' subunit | chr1:19499282-19505397 FORWARD LENGTH=926	LOC_Os02g11830.2	protein|coatomer subunit beta, putative, expressed	IMGA|Medtr5g022690.1	U4/U6 small nuclear ribonucleoprotein PRP4-like protein chr5 8715534-8712947 H EGN_Mt100125 20111014	GO:0006094|gluconeogenesis GO:0006886|intracellular protein transport GO:0007010|cytoskeleton organization GO:0010498|proteasomal protein catabolic process GO:0016192|vesicle-mediated transport	GO:0005198|structural molecule activity	GO:0005737|cytoplasm GO:0005829|cytosol GO:0030117|membrane coat GO:0030126|COPI vesicle coat
pt2_01865	A	A1S	Potri.001G179200	Potri.001G179200(AS)	POPTR_0001s17940	sp|Q9C827|COB22_ARATH	Coatomer subunit beta'-2 OS=Arabidopsis thaliana GN=At1g52360 PE=2 SV=1	AT1G52360.1	| Symbols: | Coatomer, beta' subunit | chr1:19499282-19505397 FORWARD LENGTH=926	LOC_Os02g11830.2	protein|coatomer subunit beta, putative, expressed	IMGA|Medtr5g022690.1	U4/U6 small nuclear ribonucleoprotein PRP4-like protein chr5 8715534-8712947 H EGN_Mt100125 20111014	GO:0006094|gluconeogenesis GO:0006886|intracellular protein transport GO:0007010|cytoskeleton organization GO:0010498|proteasomal protein catabolic process GO:0016192|vesicle-mediated transport	GO:0005198|structural molecule activity	GO:0005737|cytoplasm GO:0005829|cytosol GO:0030117|membrane coat GO:0030126|COPI vesicle coat
pt2_01866	G	G1	NA	NA	POPTR_0001s17955	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01867	A	A1S	Potri.001G179400	Potri.001G179400(AS)	POPTR_0001s17960	sp|Q9LW86|SUT34_ARATH	Probable sulfate transporter 3.4 OS=Arabidopsis thaliana GN=SULTR3;4 PE=2 SV=1	AT3G15990.1	| Symbols: SULTR3;4 | sulfate transporter 3;4 | chr3:5427081-5430679 FORWARD LENGTH=653	LOC_Os06g05160.1	protein|sulfate transporter, putative, expressed	IMGA|Medtr1g071530.1	Sulfate/bicarbonate/oxalate exchanger and transporter sat-1 chr1 17673194-17680143 E EGN_Mt100125 20111014	GO:0006810|transport GO:0008272|sulfate transport GO:0055085|transmembrane transport	GO:0005215|transporter activity GO:0008271|secondary active sulfate transmembrane transporter activity GO:0015116|sulfate transmembrane transporter activity	GO:0009506|plasmodesma GO:0016020|membrane GO:0016021|integral to membrane
pt2_01868	A	A1S	Potri.001G179500	Potri.001G179500(AS)	POPTR_0001s17970	sp|Q55E69|SYS1_DICDI	Protein SYS1 homolog OS=Dictyostelium discoideum GN=sys1 PE=3 SV=1	AT1G79990.4	| Symbols: | structural molecules | chr1:30084522-30085194 FORWARD LENGTH=152	LOC_Os01g41040.1	protein|SCF apoptosis response protein, putative, expressed	NA	NA	GO:0006094|gluconeogenesis GO:0006661|phosphatidylinositol biosynthetic process GO:0006886|intracellular protein transport GO:0007010|cytoskeleton organization GO:0010498|proteasomal protein catabolic process GO:0016192|vesicle-mediated transport	GO:0005198|structural molecule activity	GO:0000139|Golgi membrane GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane GO:0030117|membrane coat GO:0030126|COPI vesicle coat
pt2_01869	A	A1S	Potri.001G179500	Potri.001G179500(AS)	POPTR_0001s17970	sp|Q55E69|SYS1_DICDI	Protein SYS1 homolog OS=Dictyostelium discoideum GN=sys1 PE=3 SV=1	AT1G79990.4	| Symbols: | structural molecules | chr1:30084522-30085194 FORWARD LENGTH=152	LOC_Os01g41040.1	protein|SCF apoptosis response protein, putative, expressed	NA	NA	GO:0006094|gluconeogenesis GO:0006661|phosphatidylinositol biosynthetic process GO:0006886|intracellular protein transport GO:0007010|cytoskeleton organization GO:0010498|proteasomal protein catabolic process GO:0016192|vesicle-mediated transport	GO:0005198|structural molecule activity	GO:0000139|Golgi membrane GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane GO:0030117|membrane coat GO:0030126|COPI vesicle coat
pt2_01870	A	A1S	Potri.001G179600	Potri.001G179600(AS)	POPTR_0001s17980	sp|Q9M7J4|MFP1_TOBAC	MAR-binding filament-like protein 1-1 OS=Nicotiana tabacum GN=MFP1-1 PE=2 SV=1	AT3G16000.1	| Symbols: MFP1 | MAR binding filament-like protein 1 | chr3:5431041-5433613 REVERSE LENGTH=726	LOC_Os01g08510.1	protein|MAR-binding filament-like protein 1, putative, expressed	NA	NA	GO:0000023|maltose metabolic process GO:0000272|polysaccharide catabolic process GO:0005982|starch metabolic process GO:0006098|pentose-phosphate shunt GO:0006655|phosphatidylglycerol biosynthetic process GO:0009664|plant-type cell wall organization GO:0009902|chloroplast relocation GO:0010027|thylakoid membrane organization GO:0010075|regulation of meristem growth GO:0019252|starch biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019760|glucosinolate metabolic process GO:0034660|ncRNA metabolic process	GO:0003677|DNA binding	GO:0005634|nucleus GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0042646|plastid nucleoid
pt2_01871	A	A1S	Potri.001G179700	Potri.001G179700(AS)	POPTR_0001s17990	NA	NA	AT5G11460.1	| Symbols: | Protein of unknown function (DUF581) | chr5:3657064-3658388 REVERSE LENGTH=344	LOC_Os01g08520.1	protein|DUF581 domain containing protein, expressed	IMGA|Medtr1g071780.1	Senescence-associated protein SAG102 chr1 17804386-17805727 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_01872	A	A1S	Potri.001G179800	Potri.001G179800(AS)	POPTR_0001s18000	NA	NA	AT3G24490.1	| Symbols: | Alcohol dehydrogenase transcription factor Myb/SANT-like family protein | chr3:8911022-8912023 FORWARD LENGTH=333	LOC_Os01g52090.1	protein|transcription factor like protein, putative, expressed	IMGA|contig_83346_1.1	Transcription regulation protein contig_83346 3217-606 E PREDN 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0043687|post-translational protein modification GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01873	A	A1S	Potri.001G179900	Potri.001G179900(AS)	POPTR_0001s18010	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01874	G	G1	NA	NA	POPTR_0001s18020	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01875	A	A1S	Potri.001G180000	Potri.001G180000(AS)	POPTR_0001s18030	sp|Q9LW84|PP236_ARATH	Pentatricopeptide repeat-containing protein At3g16010 OS=Arabidopsis thaliana GN=At3g16010 PE=2 SV=1	AT3G16010.1	| Symbols: | Pentatricopeptide repeat (PPR-like) superfamily protein | chr3:5434142-5436244 FORWARD LENGTH=642	LOC_Os02g16650.1	protein|PPR repeat domain containing protein, putative, expressed	IMGA|Medtr5g095130.1	Pentatricopeptide repeat-containing protein chr5 40539476-40536629 H EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005739|mitochondrion
pt2_01876	A	A2S	Potri.001G180100	Potri.001G180100(AS) Potri.003G055800(BS)	POPTR_0001s18040	sp|F4HQD4|HSP7P_ARATH	Heat shock 70 kDa protein 15 OS=Arabidopsis thaliana GN=HSP70-15 PE=1 SV=1	AT1G79920.1	| Symbols: | Heat shock protein 70 (Hsp 70) family protein | chr1:30058935-30062224 REVERSE LENGTH=831	LOC_Os01g08560.1	protein|DnaK family protein, putative, expressed	IMGA|Medtr5g092570.1	97 kDa heat shock protein chr5 39390729-39395142 E EGN_Mt100125 20111014	NA	GO:0005524|ATP binding	GO:0005618|cell wall GO:0005634|nucleus GO:0005829|cytosol GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_01877	A	A1S	Potri.001G180200	Potri.001G180200(AS)	POPTR_0001s18050	sp|P0C928|RTEL1_DANRE	Regulator of telomere elongation helicase 1 OS=Danio rerio GN=rtel1 PE=3 SV=1	AT1G79950.1	| Symbols: | RAD3-like DNA-binding helicase protein | chr1:30073580-30079537 FORWARD LENGTH=1040	LOC_Os01g40980.1	protein|helicase, putative, expressed	NA	NA	GO:0006139|nucleobase-containing compound metabolic process GO:0006346|methylation-dependent chromatin silencing GO:0006355|regulation of transcription, DNA-dependent GO:0007267|cell-cell signaling GO:0009616|virus induced gene silencing GO:0009855|determination of bilateral symmetry GO:0010014|meristem initiation GO:0010073|meristem maintenance GO:0010267|production of ta-siRNAs involved in RNA interference GO:0016246|RNA interference GO:0035196|production of miRNAs involved in gene silencing by miRNA	GO:0003676|nucleic acid binding GO:0003677|DNA binding GO:0004003|ATP-dependent DNA helicase activity GO:0005524|ATP binding GO:0008026|ATP-dependent helicase activity GO:0016817|hydrolase activity, acting on acid anhydrides GO:0016818|hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	GO:0005634|nucleus GO:0005739|mitochondrion
pt2_01878	A	A1S	Potri.001G180300	Potri.001G180300(AS)	POPTR_0001s18060	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01879	A	A1S	Potri.001G180400	Potri.001G180400(AS)	POPTR_0001s18070	NA	NA	AT1G79960.1	| Symbols: ATOFP14, OFP14 | ovate family protein 14 | chr1:30079665-30080549 REVERSE LENGTH=294	LOC_Os01g40970.1	protein|DUF623 domain containing protein, expressed	NA	NA	GO:0045892|negative regulation of transcription, DNA-dependent	NA	GO:0005634|nucleus
pt2_01880	A	A1S	Potri.001G180500	Potri.001G180500(AS)	POPTR_0001s18080	NA	NA	NA	NA	LOC_Os01g08670.1	protein|expressed protein	NA	NA	GO:0002237|response to molecule of bacterial origin GO:0002679|respiratory burst involved in defense response GO:0006979|response to oxidative stress GO:0008150|biological_process GO:0009611|response to wounding GO:0010200|response to chitin GO:0030968|endoplasmic reticulum unfolded protein response GO:0035556|intracellular signal transduction GO:0050832|defense response to fungus	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0005886|plasma membrane
pt2_01881	A	A2S	Potri.001G180600	Potri.001G180600(AS) Potri.003G055000(DS)	POPTR_0001s18090	NA	NA	AT1G52330.1	| Symbols: | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | chr1:19488962-19489763 FORWARD LENGTH=214	LOC_Os03g48950.2	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01882	A	A1S	Potri.004G063700	Potri.004G063700(AS)	POPTR_0001s18110	NA	NA	NA	NA	LOC_Os08g39580.1	protein|zinc knuckle family protein, expressed	NA	NA	NA	NA	NA
pt2_01883	A	A1S	Potri.001G181000	Potri.001G181000(AS)	POPTR_0001s18120	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_01884	A	A1S	Potri.001G181100	Potri.001G181100(AS)	POPTR_0001s18130	NA	NA	AT1G52320.4	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT5G25590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr1:19485399-19487204 FORWARD LENGTH=472	LOC_Os05g32760.1	protein|BZIP protein, putative, expressed	IMGA|Medtr5g022530.1	hypothetical protein chr5 8631873-8636502 E EGN_Mt100125 20111014	GO:0006487|protein N-linked glycosylation GO:0006499|N-terminal protein myristoylation GO:0009640|photomorphogenesis GO:0010388|cullin deneddylation GO:0016567|protein ubiquitination GO:0016571|histone methylation GO:0016579|protein deubiquitination GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_01885	G	G1	NA	NA	POPTR_0001s18140	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01886	A	A1S	Potri.001G181200	Potri.001G181200(AS)	POPTR_0001s18150	sp|Q9BUU2|MET22_HUMAN	Methyltransferase-like protein 22 OS=Homo sapiens GN=METTL22 PE=2 SV=2	AT1G79915.1	| Symbols: | Putative methyltransferase family protein | chr1:30057220-30058657 FORWARD LENGTH=312	LOC_Os06g43250.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01887	A	A1S	Potri.001G181300	Potri.001G181300(AS)	POPTR_0001s18160	sp|Q54I39|IST1L_DICDI	IST1-like protein OS=Dictyostelium discoideum GN=DDB_G0289029 PE=3 SV=1	AT1G79910.1	| Symbols: | Regulator of Vps4 activity in the MVB pathway protein | chr1:30055050-30057011 FORWARD LENGTH=381	LOC_Os02g06430.1	protein|DUF292 domain containing protein, expressed	IMGA|Medtr1g110690.1	IST1-like protein chr1 32671624-32676007 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005737|cytoplasm
pt2_01888	A	A1S	Potri.001G181400	Potri.001G181400(AS)	POPTR_0001s18170	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01889	A	A1S	Potri.001G181500	Potri.001G181500(AS)	POPTR_0001s18180	sp|Q9C9I2|ERF21_ARATH	Ethylene-responsive transcription factor ERF021 OS=Arabidopsis thaliana GN=ERF021 PE=2 SV=1	AT1G71450.1	| Symbols: | Integrase-type DNA-binding superfamily protein | chr1:26927088-26927639 FORWARD LENGTH=183	LOC_Os11g13840.1	protein|AP2 domain containing protein, expressed	IMGA|Medtr5g008590.1	Ethylene-responsive transcription factor chr5 1599800-1600363 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_01890	A	A1S	Potri.001G181600	Potri.001G181600(AS)	POPTR_0001s18190	NA	NA	NA	NA	NA	NA	NA	NA	GO:0031348|negative regulation of defense response GO:0042177|negative regulation of protein catabolic process	GO:0003674|molecular_function GO:0005515|protein binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_01891	C	C1S	Potri.001G181700	Potri.001G181700(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01892	A	A1S	Potri.001G181800	Potri.001G181800(AS)	POPTR_0001s18210	NA	NA	AT1G15270.1	| Symbols: | Translation machinery associated TMA7 | chr1:5250833-5252020 REVERSE LENGTH=64	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005886|plasma membrane
pt2_01893	A	A1S	Potri.001G181900	Potri.001G181900(AS)	POPTR_0001s18220	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01894	A	A1S	Potri.001G182000	Potri.001G182000(AS)	POPTR_0001s18230	sp|Q08DK7|MCATL_BOVIN	Mitochondrial carnitine/acylcarnitine carrier protein CACL OS=Bos taurus GN=SLC25A29 PE=2 SV=1	AT1G79900.1	| Symbols: ATMBAC2, BAC2 | Mitochondrial substrate carrier family protein | chr1:30052524-30053599 REVERSE LENGTH=296	LOC_Os01g12520.1	protein|mitochondrial carrier protein, putative, expressed	IMGA|Medtr5g030530.1	Mitochondrial carnitine/acylcarnitine carrier-like protein chr5 12590466-12586303 E EGN_Mt100125 20111014	GO:0006561|proline biosynthetic process GO:0006810|transport GO:0006839|mitochondrial transport GO:0006972|hyperosmotic response GO:0043091|L-arginine import	GO:0000064|L-ornithine transmembrane transporter activity GO:0005476|carnitine:acyl carnitine antiporter activity	GO:0005739|mitochondrion GO:0005743|mitochondrial inner membrane
pt2_01895	A	A1S	Potri.001G182100	Potri.001G182100(AS)	POPTR_0001s18240	sp|Q9ZNR6|PDX12_ARATH	Probable pyridoxal biosynthesis protein PDX1.2 OS=Arabidopsis thaliana GN=PDX12 PE=1 SV=1	AT3G16050.1	| Symbols: A37, ATPDX1.2, PDX1.2 | pyridoxine biosynthesis 1.2 | chr3:5444121-5445065 REVERSE LENGTH=314	LOC_Os07g01020.1	protein|SOR/SNZ family protein, putative, expressed	NA	NA	GO:0006457|protein folding GO:0008152|metabolic process GO:0009408|response to heat GO:0009644|response to high light intensity GO:0034976|response to endoplasmic reticulum stress GO:0042542|response to hydrogen peroxide GO:0042819|vitamin B6 biosynthetic process GO:0042823|pyridoxal phosphate biosynthetic process	GO:0003824|catalytic activity GO:0005515|protein binding GO:0046982|protein heterodimerization activity	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_01896	A	A10S	Potri.001G182200	Potri.001G182200(AS) Potri.005G153700(BS) Potri.008G176600(BS) Potri.017G008500(DS) Potri.014G091900(DS) Potri.019G061000(DS) Potri.010G017700(DS) Potri.005G156800(DS) Potri.001G236600(DS) Potri.005G135800(DS)	POPTR_0001s18250	NA	NA	NA	NA	LOC_Os03g46884.1	protein|transposon protein, putative, CACTA, En/Spm sub-class, expressed	IMGA|Medtr5g054570.1	PIF-like protein chr5 21936286-21937344 H EGN_Mt100125 20111014	NA	NA	NA
pt2_01897	B	B3S	Potri.018G075700	Potri.018G075700(BS) Potri.009G001000(DS) Potri.017G072400(DS)	POPTR_0001s18255	NA	NA	AT4G10890.1	| Symbols: | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2439 (InterPro:IPR018838); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:6688833-6692937 FORWARD LENGTH=527	ChrUn.fgenesh.mRNA.24	protein|hypothetical protein	IMGA|Medtr1g059320.1	hypothetical protein chr1 15361664-15360985 H EGN_Mt100125 20111014	NA	GO:0003674|molecular_function GO:0016788|hydrolase activity, acting on ester bonds	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01898	A	A2S	Potri.001G182300	Potri.001G182300(AS) Potri.003G053800(DS)	POPTR_0001s18260	sp|Q95LP1|KIF2C_MACFA	Kinesin-like protein KIF2C OS=Macaca fascicularis GN=KIF2C PE=2 SV=1	AT3G16060.1	| Symbols: | ATP binding microtubule motor family protein | chr3:5447503-5451196 FORWARD LENGTH=684	LOC_Os01g43580.1	protein|kinesin motor domain containing protein, putative, expressed	IMGA|contig_49486_1.1	Kinesin like protein contig_49486 826-6258 E PREDN 20111014	NA	GO:0003777|microtubule motor activity GO:0005524|ATP binding	GO:0005634|nucleus GO:0005739|mitochondrion GO:0005886|plasma membrane
pt2_01899	B	B1S	Potri.001G182400	Potri.001G182400(BS)	POPTR_0001s18270	sp|O81755|PER48_ARATH	Putative Peroxidase 48 OS=Arabidopsis thaliana GN=PER48 PE=2 SV=3	AT4G33870.1	| Symbols: | Peroxidase superfamily protein | chr4:16234670-16236492 REVERSE LENGTH=401	LOC_Os01g51550.1	protein|peroxidase family protein, expressed	IMGA|Medtr1g025980.1	Peroxidase chr1 8471540-8470286 H EGN_Mt100125 20111014	GO:0006979|response to oxidative stress GO:0055114|oxidation-reduction process	GO:0004601|peroxidase activity GO:0020037|heme binding	GO:0005576|extracellular region
pt2_01900	A	A1S	Potri.001G182500	Potri.001G182500(AS)	POPTR_0001s18280	NA	NA	AT3G16070.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15260.1); Has 26 Blast hits to 26 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:5451864-5452316 REVERSE LENGTH=150	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_01901	A	A1S	Potri.001G182600	Potri.001G182600(AS)	POPTR_0001s18290	sp|Q6AXC6|DDX11_MOUSE	Probable ATP-dependent RNA helicase DDX11 OS=Mus musculus GN=Ddx11 PE=2 SV=1	AT1G79890.1	| Symbols: | RAD3-like DNA-binding helicase protein | chr1:30048655-30052203 FORWARD LENGTH=882	LOC_Os05g13300.1	protein|helicase, putative, expressed	NA	NA	GO:0006139|nucleobase-containing compound metabolic process GO:0006259|DNA metabolic process GO:0006261|DNA-dependent DNA replication GO:0006310|DNA recombination GO:0007126|meiosis GO:0007129|synapsis GO:0007131|reciprocal meiotic recombination GO:0010332|response to gamma radiation GO:0032204|regulation of telomere maintenance GO:0033044|regulation of chromosome organization GO:0042138|meiotic DNA double-strand break formation GO:0043247|telomere maintenance in response to DNA damage	GO:0003676|nucleic acid binding GO:0003677|DNA binding GO:0004003|ATP-dependent DNA helicase activity GO:0005524|ATP binding GO:0008026|ATP-dependent helicase activity GO:0016817|hydrolase activity, acting on acid anhydrides GO:0016818|hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	GO:0005634|nucleus
pt2_01902	A	A1S	Potri.001G182700	Potri.001G182700(AS)	POPTR_0001s18300	NA	NA	AT2G25737.1	| Symbols: | Sulfite exporter TauE/SafE family protein | chr2:10977174-10979677 FORWARD LENGTH=476	LOC_Os08g30020.2	protein|membrane protein, putative, expressed	IMGA|Medtr5g019950.1	Membrane protein-like protein chr5 7311160-7315089 H EGN_Mt100125 20111014	NA	NA	GO:0009507|chloroplast GO:0016021|integral to membrane
pt2_01903	A	A1S	Potri.001G182800	Potri.001G182800(AS)	POPTR_0001s18310	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01904	G	G1	NA	NA	POPTR_0001s18320	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01905	A	A2S	Potri.001G182900	Potri.001G182900(AS) Potri.003G053400(DS)	POPTR_0001s18330	sp|O24461|RAB7_PRUAR	Ras-related protein Rab7 OS=Prunus armeniaca PE=2 SV=1	AT3G16100.1	| Symbols: ATRABG3C, ATRAB7D, RABG3c | RAB GTPase homolog G3C | chr3:5459270-5460556 FORWARD LENGTH=206	LOC_Os01g12730.1	protein|ras-related protein, putative, expressed	IMGA|Medtr5g013900.1	Ras-related protein Rab-6 chr5 4324275-4328602 E EGN_Mt100125 20111014	GO:0007264|small GTPase mediated signal transduction GO:0015031|protein transport GO:0016192|vesicle-mediated transport	GO:0005525|GTP binding	GO:0005634|nucleus GO:0005794|Golgi apparatus GO:0005886|plasma membrane
pt2_01906	A	A1S	Potri.001G183000	Potri.001G183000(AS)	POPTR_0001s18340	sp|Q9LV48|PERK1_ARATH	Proline-rich receptor-like protein kinase PERK1 OS=Arabidopsis thaliana GN=PERK1 PE=1 SV=1	AT3G24550.1	| Symbols: ATPERK1, PERK1 | proline extensin-like receptor kinase 1 | chr3:8960411-8963303 FORWARD LENGTH=652	LOC_Os05g12680.1	protein|retrotransposon protein, putative, unclassified, expressed	IMGA|Medtr5g019940.1	Cysteine-rich receptor-like protein kinase chr5 7305562-7308897 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0009611|response to wounding GO:0009620|response to fungus GO:0046777|protein autophosphorylation GO:0051510|regulation of unidimensional cell growth GO:0052541|plant-type cell wall cellulose metabolic process GO:0052546|cell wall pectin metabolic process	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_01907	G	G1	NA	NA	POPTR_0001s18350	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01908	A	A1S	Potri.001G183100	Potri.001G183100(AS)	POPTR_0001s18360	NA	NA	AT1G15240.1	| Symbols: | Phox-associated domain;Phox-like;Sorting nexin, C-terminal | chr1:5243799-5246495 FORWARD LENGTH=706	LOC_Os05g50660.1	protein|PX domain containing protein, putative, expressed	IMGA|contig_95319_1.1	Unknown protein contig_95319 3176-516 H PREDN 20111014	GO:0007165|signal transduction GO:0035556|intracellular signal transduction	GO:0035091|phosphatidylinositol binding	GO:0005634|nucleus
pt2_01909	A	A2S	Potri.001G183200	Potri.001G183200(AS) Potri.003G053100(DS)	POPTR_0001s18370	sp|Q8LEM8|RL373_ARATH	60S ribosomal protein L37-3 OS=Arabidopsis thaliana GN=RPL37C PE=3 SV=1	AT3G16080.1	| Symbols: | Zinc-binding ribosomal protein family protein | chr3:5454892-5455677 FORWARD LENGTH=95	LOC_Os02g56990.1	protein|ribosomal protein L37, putative, expressed	NA	NA	GO:0001510|RNA methylation GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005737|cytoplasm GO:0005840|ribosome GO:0022625|cytosolic large ribosomal subunit
pt2_01910	A	A1S	Potri.001G183300	Potri.001G183300(AS)	POPTR_0001s18380	NA	NA	AT2G25737.1	| Symbols: | Sulfite exporter TauE/SafE family protein | chr2:10977174-10979677 FORWARD LENGTH=476	LOC_Os08g30020.3	protein|membrane protein, putative, expressed	IMGA|Medtr5g019950.1	Membrane protein-like protein chr5 7311160-7315089 H EGN_Mt100125 20111014	NA	NA	GO:0009507|chloroplast GO:0016021|integral to membrane
pt2_01911	A	A1S	Potri.001G183400	Potri.001G183400(AS)	POPTR_0001s18390	NA	NA	AT2G25737.1	| Symbols: | Sulfite exporter TauE/SafE family protein | chr2:10977174-10979677 FORWARD LENGTH=476	LOC_Os09g17600.2	protein|membrane protein, putative, expressed	IMGA|Medtr5g019950.1	Membrane protein-like protein chr5 7311160-7315089 H EGN_Mt100125 20111014	NA	NA	GO:0009507|chloroplast GO:0016021|integral to membrane
pt2_01912	A	A1S	Potri.001G183500	Potri.001G183500(AS)	POPTR_0001s18400	sp|Q66GQ3|PDI16_ARATH	Protein disulfide isomerase-like 1-6 OS=Arabidopsis thaliana GN=PDIL1-6 PE=1 SV=1	AT3G16110.1	| Symbols: ATPDIL1-6, ATPDI4, PDI4, PDIL1-6 | PDI-like 1-6 | chr3:5460955-5463666 REVERSE LENGTH=534	LOC_Os06g06790.1	protein|OsPDIL1-5 protein disulfide isomerase PDIL1-5, expressed	NA	NA	GO:0000280|nuclear division GO:0007000|nucleolus organization GO:0045454|cell redox homeostasis	GO:0003756|protein disulfide isomerase activity	GO:0005783|endoplasmic reticulum GO:0009507|chloroplast
pt2_01913	A	A1S	Potri.001G183600	Potri.001G183600(AS)	POPTR_0001s18410	NA	NA	AT1G45688.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42860.1); Has 258 Blast hits to 242 proteins in 39 species: Archae - 0; Bacteria - 11; Metazoa - 10; Fungi - 14; Plants - 198; Viruses - 17; Other Eukaryotes - 8 (source: NCBI BLink). | chr1:17191502-17192870 FORWARD LENGTH=342	LOC_Os06g06780.1	protein|harpin-induced protein, putative, expressed	NA	NA	GO:0008150|biological_process GO:0048767|root hair elongation	GO:0003674|molecular_function	GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_01914	A	A1S	Potri.001G183700	Potri.001G183700(AS)	POPTR_0001s18420	sp|Q8U3Y2|GYAR_PYRFU	Glyoxylate reductase OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=gyaR PE=3 SV=1	AT1G79870.1	| Symbols: | D-isomer specific 2-hydroxyacid dehydrogenase family protein | chr1:30044794-30045851 FORWARD LENGTH=313	LOC_Os01g12830.2	protein|erythronate-4-phosphate dehydrogenase domain containing protein, expressed	NA	NA	GO:0009854|oxidative photosynthetic carbon pathway	GO:0016491|oxidoreductase activity GO:0016618|hydroxypyruvate reductase activity GO:0030267|glyoxylate reductase (NADP) activity	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_01915	A	A1S	Potri.001G183800	Potri.001G183800(AS)	POPTR_0001s18430	sp|Q9LV40|ROGF8_ARATH	Rho guanine nucleotide exchange factor 8 OS=Arabidopsis thaliana GN=ROPGEF8 PE=1 SV=1	AT1G79860.1	| Symbols: ATROPGEF12, ROPGEF12, MEE64 | RHO guanyl-nucleotide exchange factor 12 | chr1:30042172-30044092 REVERSE LENGTH=515	LOC_Os02g17240.1	protein|ATROPGEF7/ROPGEF7, putative, expressed	IMGA|Medtr5g081410.1	Rop guanine nucleotide exchange factor chr5 33853946-33849635 E EGN_Mt100125 20111014	GO:0009793|embryo development ending in seed dormancy GO:0009860|pollen tube growth	GO:0005089|Rho guanyl-nucleotide exchange factor activity	GO:0005634|nucleus GO:0005886|plasma membrane GO:0090406|pollen tube
pt2_01916	R	R	NA	NA	POPTR_0001s18450	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01917	A	A1A	Potri.001G184000	Potri.001G184000(AA)	POPTR_0001s18460	sp|P16180|RR17_ARATH	30S ribosomal protein S17, chloroplastic OS=Arabidopsis thaliana GN=RPS17 PE=2 SV=1	AT1G79850.1	| Symbols: RPS17, CS17, PRPS17 | ribosomal protein S17 | chr1:30041473-30041922 REVERSE LENGTH=149	LOC_Os04g59494.1	protein|transportin-2, putative, expressed	NA	NA	GO:0006412|translation GO:0032544|plastid translation	GO:0003735|structural constituent of ribosome	GO:0000312|plastid small ribosomal subunit GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope GO:0022627|cytosolic small ribosomal subunit
pt2_01918	A	A1S	Potri.001G184100	Potri.001G184100(AS)	POPTR_0001s18470	sp|P46607|HGL2_ARATH	Homeobox-leucine zipper protein GLABRA 2 OS=Arabidopsis thaliana GN=GL2 PE=2 SV=3	AT1G79840.1	| Symbols: GL2 | HD-ZIP IV family of homeobox-leucine zipper protein with lipid-binding START domain | chr1:30037526-30041013 FORWARD LENGTH=747	LOC_Os01g55549.1	protein|homeobox and START domains containing protein, putative, expressed	IMGA|Medtr5g029320.1	Homeobox-leucine zipper protein ROC3 chr5 12022721-12028684 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009888|tissue development GO:0009957|epidermal cell fate specification GO:0010062|negative regulation of trichoblast fate specification GO:0030154|cell differentiation	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_01919	G	G7	NA	NA	POPTR_0001s18480	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01920	G	G1	NA	NA	POPTR_0001s18490	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01921	A	A3S	Potri.001G184300	Potri.001G184300(AS) Potri.009G156800(BS) Potri.009G156600(BS)	POPTR_0001s18500	sp|O81081|LAC2_ARATH	Laccase-2 OS=Arabidopsis thaliana GN=LAC2 PE=2 SV=1	AT2G29130.1	| Symbols: LAC2, ATLAC2 | laccase 2 | chr2:12525189-12527699 REVERSE LENGTH=573	LOC_Os01g62490.1	protein|laccase precursor protein, putative, expressed	IMGA|Medtr5g020600.1	Laccase-11 chr5 7633298-7636466 E EGN_Mt100125 20111014	GO:0009698|phenylpropanoid metabolic process GO:0009809|lignin biosynthetic process GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process GO:0046274|lignin catabolic process GO:0055114|oxidation-reduction process	GO:0005507|copper ion binding GO:0016491|oxidoreductase activity GO:0052716|hydroquinone:oxygen oxidoreductase activity	GO:0005576|extracellular region GO:0048046|apoplast
pt2_01922	C	C2S	Potri.015G064200	Potri.015G064200(CS) Potri.001G184400(CS)	sp|Q40255|ALDH_LINUS	Probable aldehyde dehydrogenase OS=Linum usitatissimum GN=FIS1 PE=2 SV=1	AT5G62530.1	| Symbols: ALDH12A1, ATP5CDH, P5CDH | aldehyde dehydrogenase 12A1 | chr5:25099768-25103159 REVERSE LENGTH=556	LOC_Os12g40440.1	protein|expressed protein	IMGA|Medtr1g014320.1	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase chr1 3773177-3769070 E EGN_Mt100125 20111014	GO:0006560|proline metabolic process GO:0008152|metabolic process GO:0009651|response to salt stress GO:0010133|proline catabolic process to glutamate GO:0055114|oxidation-reduction process GO:0072593|reactive oxygen species metabolic process	GO:0003842|1-pyrroline-5-carboxylate dehydrogenase activity GO:0004028|3-chloroallyl aldehyde dehydrogenase activity GO:0008270|zinc ion binding GO:0016491|oxidoreductase activity GO:0050897|cobalt ion binding	GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_01923	B	B2S	Potri.010G011500	Potri.010G011500(BS) Potri.001G433100(DA)	POPTR_0001s18520	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01924	A	A2S	Potri.001G184600	Potri.001G184600(AS) Potri.001G433200(AS)	POPTR_0001s18530	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006164|purine nucleotide biosynthetic process GO:0009220|pyrimidine ribonucleotide biosynthetic process GO:0009409|response to cold	GO:0003937|IMP cyclohydrolase activity GO:0004643|phosphoribosylaminoimidazolecarboxamide formyltransferase activity	GO:0009507|chloroplast GO:0009536|plastid GO:0009570|chloroplast stroma GO:0010319|stromule
pt2_01925	B	B1S	Potri.001G184700	Potri.001G184700(BS)	POPTR_0001s18540	sp|Q8LCA1|TMP14_ARATH	Thylakoid membrane phosphoprotein 14 kDa, chloroplastic OS=Arabidopsis thaliana GN=TMP14 PE=1 SV=2	AT1G52220.1	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: photosystem I P subunit (TAIR:AT2G46820.2); Has 291 Blast hits to 291 proteins in 50 species: Archae - 0; Bacteria - 90; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | chr1:19453770-19454605 REVERSE LENGTH=156	LOC_Os01g55570.3	protein|expressed protein	IMGA|Medtr5g032440.1	Glutamyl-tRNA synthetase chr5 13506160-13502156 F EGN_Mt100125 20111014	GO:0006364|rRNA processing GO:0008150|biological_process GO:0009657|plastid organization GO:0010103|stomatal complex morphogenesis GO:0010207|photosystem II assembly GO:0019684|photosynthesis, light reaction GO:0035304|regulation of protein dephosphorylation GO:0043085|positive regulation of catalytic activity	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane
pt2_01926	A	A1S	Potri.001G184800	Potri.001G184800(AS)	POPTR_0001s18550	sp|Q9SL70|TCX6_ARATH	Protein tesmin/TSO1-like CXC 6 OS=Arabidopsis thaliana GN=TCX6 PE=1 SV=1	AT2G20110.1	| Symbols: | Tesmin/TSO1-like CXC domain-containing protein | chr2:8684496-8686870 FORWARD LENGTH=571	LOC_Os01g55580.2	protein|tesmin/TSO1-like CXC domain containing protein, expressed	IMGA|Medtr5g006530.1	Lin-54-like protein chr5 723130-718351 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_01927	A	A1S	Potri.001G184900	Potri.001G184900(AS)	POPTR_0001s18555	sp|Q0WLB5|CLAH2_ARATH	Clathrin heavy chain 2 OS=Arabidopsis thaliana GN=CHC2 PE=1 SV=1	AT3G08530.1	| Symbols: | Clathrin, heavy chain | chr3:2587171-2595411 REVERSE LENGTH=1703	LOC_Os12g01390.1	protein|clathrin heavy chain, putative, expressed	IMGA|Medtr5g082900.1	Clathrin heavy chain chr5 34719270-34732522 E EGN_Mt100125 20111014	GO:0006886|intracellular protein transport GO:0006897|endocytosis GO:0016192|vesicle-mediated transport	GO:0005198|structural molecule activity GO:0005515|protein binding	GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0030130|clathrin coat of trans-Golgi network vesicle GO:0030132|clathrin coat of coated pit
pt2_01928	A	A2S	Potri.001G185000	Potri.001G185000(AS) Potri.003G052100(DS)	POPTR_0001s18560	sp|Q0WVL7|GOGC5_ARATH	Golgin candidate 5 OS=Arabidopsis thaliana GN=GC5 PE=1 SV=1	AT1G79830.3	| Symbols: GC5 | golgin candidate 5 | chr1:30028110-30033508 REVERSE LENGTH=956	LOC_Os05g48620.1	protein|tRNA-binding arm, putative, expressed	NA	NA	GO:0006944|cellular membrane fusion GO:0008150|biological_process GO:0048193|Golgi vesicle transport	GO:0005515|protein binding	GO:0005576|extracellular region GO:0005634|nucleus GO:0005737|cytoplasm GO:0005794|Golgi apparatus
pt2_01929	A	A2S	Potri.001G185100	Potri.001G185100(AS) Potri.003G052100(DS)	POPTR_0001s18570	sp|Q0WVL7|GOGC5_ARATH	Golgin candidate 5 OS=Arabidopsis thaliana GN=GC5 PE=1 SV=1	AT1G79830.3	| Symbols: GC5 | golgin candidate 5 | chr1:30028110-30033508 REVERSE LENGTH=956	LOC_Os05g48620.1	protein|tRNA-binding arm, putative, expressed	NA	NA	GO:0006944|cellular membrane fusion GO:0008150|biological_process GO:0048193|Golgi vesicle transport	GO:0005515|protein binding	GO:0005576|extracellular region GO:0005634|nucleus GO:0005737|cytoplasm GO:0005794|Golgi apparatus
pt2_01930	A	A1S	Potri.001G185200	Potri.001G185200(AS)	POPTR_0001s18580	NA	NA	AT3G19950.1	| Symbols: | RING/U-box superfamily protein | chr3:6942853-6943839 FORWARD LENGTH=328	LOC_Os03g22830.2	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr5g062820.1	E3 ubiquitin-protein ligase RNF181 chr5 25331306-25331944 H EGN_Mt100125 20111014	GO:0009555|pollen development	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_01931	A	A1S	Potri.001G185300	Potri.001G185300(AS)	POPTR_0001s18590	sp|Q2V4B9|PLST3_ARATH	Probable plastidic glucose transporter 3 OS=Arabidopsis thaliana GN=At1g79820 PE=2 SV=2	AT1G79820.2	| Symbols: SGB1 | Major facilitator superfamily protein | chr1:30022581-30026771 REVERSE LENGTH=495	LOC_Os02g17500.2	protein|transporter family protein, putative, expressed	IMGA|Medtr5g020270.1	Sugar transporter ERD6-like protein chr5 7498368-7494668 H EGN_Mt100125 20111014	GO:0006810|transport GO:0009855|determination of bilateral symmetry GO:0009887|organ morphogenesis GO:0010051|xylem and phloem pattern formation GO:0048439|flower morphogenesis GO:0048519|negative regulation of biological process GO:0055085|transmembrane transport	GO:0005215|transporter activity GO:0005351|sugar:hydrogen symporter activity GO:0015144|carbohydrate transmembrane transporter activity GO:0022857|transmembrane transporter activity GO:0022891|substrate-specific transmembrane transporter activity	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0009507|chloroplast GO:0016020|membrane GO:0016021|integral to membrane
pt2_01932	A	A1S	Potri.001G185400	Potri.001G185400(AS)	POPTR_0001s18600	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01933	C	C1S	Potri.001G185500	Potri.001G185500(CS)	sp|Q8H151|AAE13_ARATH	Malonate--CoA ligase OS=Arabidopsis thaliana GN=AAE13 PE=1 SV=1	AT3G16170.1	| Symbols: | AMP-dependent synthetase and ligase family protein | chr3:5476490-5480128 FORWARD LENGTH=544	LOC_Os01g55590.1	protein|AMP-binding enzyme, putative, expressed	IMGA|Medtr5g007640.1	4-coumarate CoA ligase chr5 1207155-1213155 E EGN_Mt100125 20111014	GO:0008152|metabolic process GO:0090410|malonate catabolic process	GO:0003824|catalytic activity GO:0016208|AMP binding GO:0090409|malonyl-CoA synthetase activity	GO:0005634|nucleus GO:0005739|mitochondrion GO:0005829|cytosol GO:0016020|membrane
pt2_01934	A	A1S	Potri.001G185500	Potri.001G185500(AS)	POPTR_0001s18620	sp|Q8H151|AAE13_ARATH	Malonate--CoA ligase OS=Arabidopsis thaliana GN=AAE13 PE=1 SV=1	AT3G16170.1	| Symbols: | AMP-dependent synthetase and ligase family protein | chr3:5476490-5480128 FORWARD LENGTH=544	LOC_Os01g55590.1	protein|AMP-binding enzyme, putative, expressed	IMGA|Medtr5g007640.1	4-coumarate CoA ligase chr5 1207155-1213155 E EGN_Mt100125 20111014	GO:0008152|metabolic process GO:0090410|malonate catabolic process	GO:0003824|catalytic activity GO:0016208|AMP binding GO:0090409|malonyl-CoA synthetase activity	GO:0005634|nucleus GO:0005739|mitochondrion GO:0005829|cytosol GO:0016020|membrane
pt2_01935	A	A1S	Potri.001G185600	Potri.001G185600(AS)	POPTR_0001s18630	sp|P29102|LEU3_BRANA	3-isopropylmalate dehydrogenase, chloroplastic OS=Brassica napus PE=2 SV=1	AT1G80560.1	| Symbols: ATIMD2, IMD2 | isopropylmalate dehydrogenase 2 | chr1:30287833-30290126 FORWARD LENGTH=405	LOC_Os03g45320.1	protein|dehydrogenase, putative, expressed	IMGA|Medtr5g023740.1	Isocitrate dehydrogenase chr5 9177700-9173787 E EGN_Mt100125 20111014	GO:0006744|ubiquinone biosynthetic process GO:0008152|metabolic process GO:0009098|leucine biosynthetic process GO:0055114|oxidation-reduction process	GO:0000287|magnesium ion binding GO:0003862|3-isopropylmalate dehydrogenase activity GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0051287|NAD binding	GO:0005737|cytoplasm GO:0009507|chloroplast GO:0009536|plastid GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope
pt2_01936	A	A1S	Potri.001G185700	Potri.001G185700(AS)	POPTR_0001s18640	sp|Q9M817|PTR6_ARATH	Probable peptide transporter At1g52190 OS=Arabidopsis thaliana GN=At1g52190 PE=1 SV=1	AT1G52190.1	| Symbols: | Major facilitator superfamily protein | chr1:19434671-19438673 FORWARD LENGTH=607	LOC_Os01g55610.1	protein|peptide transporter PTR2, putative, expressed	IMGA|Medtr5g038060.1	Peptide transporter PTR1 chr5 16203327-16198603 F EGN_Mt100125 20111014	GO:0006857|oligopeptide transport	GO:0005215|transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_01937	A	A1S	Potri.001G185800	Potri.001G185800(AS)	POPTR_0001s18650	NA	NA	AT3G16190.1	| Symbols: | Isochorismatase family protein | chr3:5489883-5491195 REVERSE LENGTH=196	LOC_Os02g17620.1	protein|isochorismatase family protein, putative, expressed	NA	NA	GO:0008152|metabolic process	GO:0003824|catalytic activity	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_01938	A	A1S	Potri.001G185900	Potri.001G185900(AS)	POPTR_0001s18660	sp|Q8S3D1|BH068_ARATH	Transcription factor bHLH68 OS=Arabidopsis thaliana GN=BHLH68 PE=2 SV=2	AT4G29100.1	| Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr4:14341140-14344575 FORWARD LENGTH=407	LOC_Os05g14010.1	protein|ethylene-responsive protein related, putative, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_01939	A	A1S	Potri.001G186000	Potri.001G186000(AS)	POPTR_0001s18670	sp|Q9CA86|PEX2_ARATH	Peroxisome biogenesis protein 2 OS=Arabidopsis thaliana GN=PEX2 PE=1 SV=1	AT1G79810.1	| Symbols: TED3, PEX2, ATPEX2 | Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein | chr1:30019944-30022156 FORWARD LENGTH=333	LOC_Os05g19480.1	protein|peroxisome assembly protein, putative, expressed	NA	NA	GO:0006635|fatty acid beta-oxidation GO:0006869|lipid transport GO:0006888|ER to Golgi vesicle-mediated transport GO:0006891|intra-Golgi vesicle-mediated transport GO:0007031|peroxisome organization GO:0009640|photomorphogenesis GO:0010351|lithium ion transport GO:0016558|protein import into peroxisome matrix GO:0044265|cellular macromolecule catabolic process	GO:0008270|zinc ion binding	GO:0005777|peroxisome GO:0005829|cytosol GO:0009506|plasmodesma
pt2_01940	A	A2S	Potri.001G186000	Potri.001G186000(AS) Potri.003G051500(DS)	POPTR_0001s18670	sp|Q9CA86|PEX2_ARATH	Peroxisome biogenesis protein 2 OS=Arabidopsis thaliana GN=PEX2 PE=1 SV=1	AT1G79810.1	| Symbols: TED3, PEX2, ATPEX2 | Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein | chr1:30019944-30022156 FORWARD LENGTH=333	LOC_Os05g19480.1	protein|peroxisome assembly protein, putative, expressed	NA	NA	GO:0006635|fatty acid beta-oxidation GO:0006869|lipid transport GO:0006888|ER to Golgi vesicle-mediated transport GO:0006891|intra-Golgi vesicle-mediated transport GO:0007031|peroxisome organization GO:0009640|photomorphogenesis GO:0010351|lithium ion transport GO:0016558|protein import into peroxisome matrix GO:0044265|cellular macromolecule catabolic process	GO:0008270|zinc ion binding	GO:0005777|peroxisome GO:0005829|cytosol GO:0009506|plasmodesma
pt2_01941	A	A1S	Potri.001G186000	Potri.001G186000(AS)	POPTR_0001s18670	sp|Q9CA86|PEX2_ARATH	Peroxisome biogenesis protein 2 OS=Arabidopsis thaliana GN=PEX2 PE=1 SV=1	AT1G79810.1	| Symbols: TED3, PEX2, ATPEX2 | Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein | chr1:30019944-30022156 FORWARD LENGTH=333	LOC_Os05g19480.1	protein|peroxisome assembly protein, putative, expressed	NA	NA	GO:0006635|fatty acid beta-oxidation GO:0006869|lipid transport GO:0006888|ER to Golgi vesicle-mediated transport GO:0006891|intra-Golgi vesicle-mediated transport GO:0007031|peroxisome organization GO:0009640|photomorphogenesis GO:0010351|lithium ion transport GO:0016558|protein import into peroxisome matrix GO:0044265|cellular macromolecule catabolic process	GO:0008270|zinc ion binding	GO:0005777|peroxisome GO:0005829|cytosol GO:0009506|plasmodesma
pt2_01942	A	A1S	Potri.001G186100	Potri.001G186100(AS)	POPTR_0001s18680	sp|Q9ZSY8|IAA27_ARATH	Auxin-responsive protein IAA27 OS=Arabidopsis thaliana GN=IAA27 PE=1 SV=1	AT4G29080.1	| Symbols: PAP2, IAA27 | phytochrome-associated protein 2 | chr4:14323665-14325213 REVERSE LENGTH=305	LOC_Os06g22870.1	protein|OsIAA21 - Auxin-responsive Aux/IAA gene family member, expressed	IMGA|Medtr5g030710.1	Auxin-responsive protein (Aux/IAA) chr5 12699892-12694370 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006417|regulation of translation GO:0007389|pattern specification process GO:0009733|response to auxin stimulus GO:0048438|floral whorl development GO:0048439|flower morphogenesis	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0046983|protein dimerization activity	GO:0005622|intracellular GO:0005634|nucleus
pt2_01943	A	A1S	Potri.001G186200	Potri.001G186200(AS)	POPTR_0001s18690	NA	NA	AT3G16200.1	| Symbols: | unknown protein; Has 97 Blast hits to 97 proteins in 15 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). | chr3:5491619-5493605 REVERSE LENGTH=456	LOC_Os01g31220.1	protein|expressed protein	NA	NA	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0008150|biological_process GO:0009086|methionine biosynthetic process	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_01944	A	A1S	Potri.001G186300	Potri.001G186300(AS)	POPTR_0001s18700	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01945	A	A1S	Potri.001G186500	Potri.001G186500(AS)	POPTR_0001s18710	sp|Q9LW63|PP251_ARATH	Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1	AT3G23330.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:8347200-8349347 FORWARD LENGTH=715	LOC_Os07g39090.1	protein|pentatricopeptide repeat domain containing protein, putative, expressed	IMGA|Medtr1g007600.1	Pentatricopeptide repeat-containing protein chr1 1022538-1020055 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_01946	A	A1S	Potri.001G186600	Potri.001G186600(AS)	POPTR_0001s18720	NA	NA	AT3G16230.2	| Symbols: | Predicted eukaryotic LigT | chr3:5500563-5503303 FORWARD LENGTH=449	LOC_Os01g13100.2	protein|KH domain containing protein, putative, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0016070|RNA metabolic process	GO:0003723|RNA binding GO:0003824|catalytic activity	GO:0005622|intracellular GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_01947	A	A1S	Potri.001G186600	Potri.001G186600(AS)	POPTR_0001s18720	NA	NA	AT3G16230.2	| Symbols: | Predicted eukaryotic LigT | chr3:5500563-5503303 FORWARD LENGTH=449	LOC_Os01g13100.2	protein|KH domain containing protein, putative, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0016070|RNA metabolic process	GO:0003723|RNA binding GO:0003824|catalytic activity	GO:0005622|intracellular GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_01948	A	A1S	Potri.001G186700	Potri.001G186700(AS)	POPTR_0001s18730	sp|Q41951|TIP21_ARATH	Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2	AT3G16240.1	| Symbols: DELTA-TIP, TIP2;1, DELTA-TIP1, AQP1, ATTIP2;1 | delta tonoplast integral protein | chr3:5505534-5506788 FORWARD LENGTH=250	LOC_Os06g22960.1	protein|aquaporin protein, putative, expressed	IMGA|Medtr5g012810.1	Aquaporin TIP2-3 chr5 3671983-3673705 F EGN_Mt100125 20111014	GO:0006810|transport GO:0006816|calcium ion transport GO:0006833|water transport GO:0007030|Golgi organization GO:0009651|response to salt stress GO:0015840|urea transport GO:0030003|cellular cation homeostasis GO:0055085|transmembrane transport GO:0070838|divalent metal ion transport	GO:0005215|transporter activity GO:0015200|methylammonium transmembrane transporter activity GO:0015204|urea transmembrane transporter activity GO:0015250|water channel activity GO:0051739|ammonia transmembrane transporter activity	GO:0000326|protein storage vacuole GO:0005618|cell wall GO:0005737|cytoplasm GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0009505|plant-type cell wall GO:0009506|plasmodesma GO:0009507|chloroplast GO:0009705|plant-type vacuole membrane GO:0009941|chloroplast envelope GO:0016020|membrane GO:0016021|integral to membrane GO:0042807|central vacuole
pt2_01949	A	A1S	Potri.001G186800	Potri.001G186800(AS)	POPTR_0001s18740	NA	NA	AT3G16250.1	| Symbols: NDF4 | NDH-dependent cyclic electron flow 1 | chr3:5507091-5508320 REVERSE LENGTH=204	LOC_Os07g30670.1	protein|2Fe-2S iron-sulfur cluster binding domain containing protein, expressed	NA	NA	GO:0006098|pentose-phosphate shunt GO:0009773|photosynthetic electron transport in photosystem I GO:0019252|starch biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019760|glucosinolate metabolic process GO:0019761|glucosinolate biosynthetic process GO:0030003|cellular cation homeostasis GO:0070838|divalent metal ion transport	GO:0009055|electron carrier activity GO:0051536|iron-sulfur cluster binding	GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0010598|NAD(P)H dehydrogenase complex (plastoquinone)
pt2_01950	A	A1S	Potri.001G186900	Potri.001G186900(AS)	POPTR_0001s18750	sp|Q8CGS5|RNZ2_RAT	Zinc phosphodiesterase ELAC protein 2 OS=Rattus norvegicus GN=Elac2 PE=2 SV=1	AT3G16260.1	| Symbols: TRZ4 | tRNAse Z4 | chr3:5509397-5513118 FORWARD LENGTH=942	LOC_Os01g13150.1	protein|metallo-beta-lactamase family protein, putative, expressed	NA	NA	GO:0008152|metabolic process GO:0042779|tRNA 3'-trailer cleavage GO:0042780|tRNA 3'-end processing	GO:0003824|catalytic activity GO:0016787|hydrolase activity GO:0016891|endoribonuclease activity, producing 5'-phosphomonoesters GO:0042781|3'-tRNA processing endoribonuclease activity	GO:0005634|nucleus
pt2_01951	A	A1S	Potri.001G187000	Potri.001G187000(AS)	POPTR_0001s18760	sp|Q9C5H4|Y3627_ARATH	VHS domain-containing protein At3g16270 OS=Arabidopsis thaliana GN=At3g16270 PE=1 SV=1	AT3G16270.1	| Symbols: | ENTH/VHS family protein | chr3:5513701-5516540 FORWARD LENGTH=690	LOC_Os01g13160.1	protein|expressed protein	NA	NA	GO:0000902|cell morphogenesis GO:0006623|protein targeting to vacuole GO:0006886|intracellular protein transport GO:0016049|cell growth GO:0016192|vesicle-mediated transport GO:0048193|Golgi vesicle transport	NA	GO:0005634|nucleus GO:0016020|membrane
pt2_01952	A	A1S	Potri.001G187100	Potri.001G187100(AS)	POPTR_0001s18770	NA	NA	AT5G06220.1	| Symbols: | LETM1-like protein | chr5:1880049-1885366 FORWARD LENGTH=832	LOC_Os08g37610.2	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009941|chloroplast envelope
pt2_01953	A	A1S	Potri.001G187200	Potri.001G187200(AS)	POPTR_0001s18780	sp|P0CM86|COX19_CRYNJ	Cytochrome c oxidase assembly protein COX19 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=COX19 PE=3 SV=1	AT1G66590.1	| Symbols: ATCOX19-1, COX19-1 | cytochrome c oxidase 19-1 | chr1:24841191-24842157 FORWARD LENGTH=98	LOC_Os02g20940.1	protein|CHCH domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01954	A	A1S	Potri.001G187300	Potri.001G187300(AS)	POPTR_0001s18790	NA	NA	AT1G52155.1	| Symbols: | unknown protein; Has 37 Blast hits to 37 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr1:19417666-19419591 FORWARD LENGTH=319	LOC_Os01g48570.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_01955	A	A1S	Potri.001G187500	Potri.001G187500(AS)	POPTR_0001s18800	sp|Q9LYD3|DREB3_ARATH	Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana GN=DREB3 PE=2 SV=1	AT5G11590.1	| Symbols: TINY2 | Integrase-type DNA-binding superfamily protein | chr5:3727789-3728499 REVERSE LENGTH=236	LOC_Os01g10370.1	protein|AP2 domain containing protein, expressed	IMGA|Medtr5g012910.1	Ethylene-responsive transcription factor TINY chr5 3739805-3739260 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_01956	C	C1S	Potri.001G187600	Potri.001G187600(CS)	sp|Q6AWW5|Y5262_ARATH	Ankyrin repeat-containing protein At5g02620 OS=Arabidopsis thaliana GN=At5g02620 PE=1 SV=1	AT2G24600.4	| Symbols: | Ankyrin repeat family protein | chr2:10452430-10454414 REVERSE LENGTH=601	LOC_Os07g34780.1	protein|ankyrin repeat domain-containing protein, putative, expressed	IMGA|Medtr5g085480.1	Serine/threonine protein phosphatase 6 regulatory ankyrin repeat subunit C chr5 35933754-35936964 E EGN_Mt100125 20111014	GO:0002237|response to molecule of bacterial origin GO:0008150|biological_process GO:0009581|detection of external stimulus GO:0009595|detection of biotic stimulus GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process	NA	GO:0005575|cellular_component
pt2_01957	A	A1S	Potri.001G187700	Potri.001G187700(AS)	POPTR_0001s18820	sp|Q9SK27|ENL1_ARATH	Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060 PE=1 SV=2	AT1G79800.1	| Symbols: ENODL7, AtENODL7 | early nodulin-like protein 7 | chr1:30018549-30019217 FORWARD LENGTH=192	LOC_Os06g17730.1	protein|plastocyanin-like domain containing protein, putative, expressed	IMGA|Medtr5g006040.1	Early nodulin-like protein chr5 502223-501280 F EGN_Mt100125 20111014	NA	GO:0005507|copper ion binding GO:0009055|electron carrier activity	GO:0005886|plasma membrane GO:0031225|anchored to membrane
pt2_01958	A	A2S	Potri.001G187900	Potri.001G187900(AS) Potri.001G187800(AA)	POPTR_0001s18830	sp|Q69P51|CESA9_ORYSJ	Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1	AT4G32410.1	| Symbols: CESA1, RSW1, AtCESA1 | cellulose synthase 1 | chr4:15641009-15646388 REVERSE LENGTH=1081	LOC_Os09g25490.1	protein|CESA9 - cellulose synthase, expressed	IMGA|contig_10763_1.1	Cellulose synthase contig_10763 678-4315 H PREDN 20111014	GO:0000902|cell morphogenesis GO:0006096|glycolysis GO:0006816|calcium ion transport GO:0006833|water transport GO:0006972|hyperosmotic response GO:0007030|Golgi organization GO:0009266|response to temperature stimulus GO:0009651|response to salt stress GO:0009664|plant-type cell wall organization GO:0009750|response to fructose stimulus GO:0016049|cell growth GO:0030243|cellulose metabolic process GO:0030244|cellulose biosynthetic process GO:0042538|hyperosmotic salinity response GO:0046686|response to cadmium ion GO:0048193|Golgi vesicle transport GO:0048767|root hair elongation	GO:0008270|zinc ion binding GO:0016757|transferase activity, transferring glycosyl groups GO:0016759|cellulose synthase activity GO:0016760|cellulose synthase (UDP-forming) activity	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0005886|plasma membrane
pt2_01959	A	A1S	Potri.001G187800	Potri.001G187800(AS)	POPTR_0001s18840	NA	NA	AT3G07510.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01580.1); Has 133 Blast hits to 133 proteins in 14 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:2393895-2394464 REVERSE LENGTH=189	LOC_Os10g09930.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_01960	A	A2S	Potri.001G188000	Potri.001G188000(AS) Potri.003G050400(DS)	POPTR_0001s18850	sp|B9GGL4|CSPLN_POPTR	CASP-like protein POPTRDRAFT_751837 OS=Populus trichocarpa GN=POPTRDRAFT_751837 PE=2 SV=1	AT3G16300.1	| Symbols: | Uncharacterised protein family (UPF0497) | chr3:5525491-5526207 REVERSE LENGTH=212	LOC_Os01g52610.1	protein|membrane associated DUF588 domain containing protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_01961	A	A1S	Potri.001G188100	Potri.001G188100(AS)	POPTR_0001s18860	sp|A1E9V4|CYB6_SORBI	Cytochrome b6 OS=Sorghum bicolor GN=petB PE=3 SV=2	ATCG00720.1	| Symbols: PETB | photosynthetic electron transfer B | chrC:74841-76292 FORWARD LENGTH=215	LOC_Os10g21324.1	protein|cytochrome b6, putative, expressed	NA	NA	GO:0006091|generation of precursor metabolites and energy GO:0006354|DNA-dependent transcription, elongation GO:0009407|toxin catabolic process GO:0009773|photosynthetic electron transport in photosystem I GO:0010583|response to cyclopentenone GO:0015979|photosynthesis GO:0016049|cell growth GO:0019684|photosynthesis, light reaction GO:0022904|respiratory electron transport chain GO:0030243|cellulose metabolic process	GO:0009055|electron carrier activity GO:0016491|oxidoreductase activity GO:0020037|heme binding	GO:0009507|chloroplast GO:0009512|cytochrome b6f complex GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009579|thylakoid GO:0016020|membrane
pt2_01962	G	G3	NA	NA	POPTR_0001s18870	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01963	A	A1S	Potri.001G188300	Potri.001G188300(AS)	POPTR_0001s18880	sp|Q6P6X9|NUP53_DANRE	Nucleoporin NUP53 OS=Danio rerio GN=nup35 PE=1 SV=1	AT3G16310.1	| Symbols: | mitotic phosphoprotein N' end (MPPN) family protein | chr3:5526593-5528106 REVERSE LENGTH=329	LOC_Os01g10350.1	protein|MPPN domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_01964	B	B1S	Potri.001G188400	Potri.001G188400(BS)	POPTR_0001s18890	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01965	A	A1S	Potri.001G188500	Potri.001G188500(AS)	POPTR_0001s18900	sp|O82632|GATA9_ARATH	GATA transcription factor 9 OS=Arabidopsis thaliana GN=GATA9 PE=2 SV=1	AT4G32890.1	| Symbols: GATA9 | GATA transcription factor 9 | chr4:15875598-15876615 FORWARD LENGTH=308	LOC_Os01g54210.1	protein|GATA zinc finger domain containing protein, expressed	IMGA|Medtr5g021340.1	GATA transcription factor chr5 7978965-7980622 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0007623|circadian rhythm GO:0009416|response to light stimulus GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_01966	D	D1S	Potri.001G188600	Potri.001G188600(DS)	POPTR_0001s18910	NA	NA	AT3G61690.1	| Symbols: | nucleotidyltransferases | chr3:22828349-22833477 FORWARD LENGTH=1303	LOC_Os03g11240.1	protein|nucleotidyltransferase, putative, expressed	NA	NA	GO:0000226|microtubule cytoskeleton organization	GO:0016779|nucleotidyltransferase activity	GO:0005634|nucleus
pt2_01967	A	A1S	Potri.001G188700	Potri.001G188700(AS)	POPTR_0001s18920	NA	NA	AT1G79770.1	| Symbols: | Protein of unknown function (DUF1677) | chr1:30014371-30014874 FORWARD LENGTH=167	LOC_Os01g10260.1	protein|expressed protein	IMGA|contig_171270_1.1	Unknown protein contig_171270 1317-252 F PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_01968	A	A2S	Potri.001G188800	Potri.001G188800(AS) Potri.003G050100(DS)	POPTR_0001s18930	sp|Q9ZU11|ATB15_ARATH	Homeobox-leucine zipper protein ATHB-15 OS=Arabidopsis thaliana GN=ATHB-15 PE=1 SV=1	AT1G52150.1	| Symbols: ATHB-15, ATHB15, CNA, ICU4 | Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein | chr1:19409913-19413961 REVERSE LENGTH=836	LOC_Os03g43930.2	protein|START domain containing protein, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0006995|cellular response to nitrogen starvation GO:0007155|cell adhesion GO:0009855|determination of bilateral symmetry GO:0009887|organ morphogenesis GO:0009944|polarity specification of adaxial/abaxial axis GO:0009965|leaf morphogenesis GO:0010014|meristem initiation GO:0010051|xylem and phloem pattern formation GO:0010073|meristem maintenance GO:0010075|regulation of meristem growth GO:0010087|phloem or xylem histogenesis GO:0010089|xylem development GO:0010090|trichome morphogenesis GO:0045010|actin nucleation GO:0048263|determination of dorsal identity GO:0048439|flower morphogenesis GO:0048519|negative regulation of biological process GO:0048765|root hair cell differentiation GO:0071555|cell wall organization GO:0080060|integument development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_01969	G	G1	NA	NA	POPTR_0001s18940	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01970	A	A1S	Potri.001G188900	Potri.001G188900(AS)	POPTR_0001s18950	NA	NA	AT1G52140.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G16330.1); Has 114 Blast hits to 114 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:19407559-19408185 REVERSE LENGTH=208	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_01971	G	G1	NA	NA	POPTR_0001s18970	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01972	A	A1S	Potri.001G189100	Potri.001G189100(AS)	POPTR_0001s18990	sp|P40234|CKI2_SCHPO	Casein kinase I homolog 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cki2 PE=1 SV=2	AT2G25760.1	| Symbols: | Protein kinase family protein | chr2:10985118-10988652 REVERSE LENGTH=673	LOC_Os05g11140.2	protein|CK1_CaseinKinase_1a.5 - CK1 includes the casein kinase 1 kinases, expressed	IMGA|Medtr1g042430.1	Casein kinase chr1 12130628-12134366 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_01973	A	A1S	Potri.001G189200	Potri.001G189200(AS)	POPTR_0001s19000	NA	NA	AT1G15215.2	| Symbols: | BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1); Has 89 Blast hits to 86 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:5238096-5239770 FORWARD LENGTH=258	LOC_Os09g17770.1	protein|retrotransposon protein, putative, unclassified, expressed	NA	NA	GO:0006306|DNA methylation GO:0006346|methylation-dependent chromatin silencing GO:0006355|regulation of transcription, DNA-dependent GO:0009560|embryo sac egg cell differentiation GO:0033562|cotranscriptional gene silencing by small RNA	GO:0003674|molecular_function GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01974	A	A1S	Potri.001G189300	Potri.001G189300(AS)	POPTR_0001s19010	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01975	A	A1S	Potri.001G189400	Potri.001G189400(AS)	POPTR_0001s19020	NA	NA	AT1G79760.1	| Symbols: DTA4 | downstream target of AGL15-4 | chr1:30012054-30013042 FORWARD LENGTH=299	LOC_Os01g54090.1	protein|expressed protein	IMGA|Medtr5g082850.1	Gibberellin 2-beta-dioxygenase chr5 34661403-34664228 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_01976	A	A1S	Potri.001G189500	Potri.001G189500(AS)	POPTR_0001s19030	sp|Q9XIE2|AB36G_ARATH	ABC transporter G family member 36 OS=Arabidopsis thaliana GN=ABCG36 PE=1 SV=1	AT1G59870.1	| Symbols: PEN3, PDR8, ATPDR8, ABCG36, ATABCG36 | ABC-2 and Plant PDR ABC-type transporter family protein | chr1:22034661-22039844 FORWARD LENGTH=1469	LOC_Os06g36090.1	protein|ABC-2 type transporter, putative, expressed	IMGA|Medtr5g070320.1	Pleiotropic drug resistance ABC transporter family protein chr5 28781263-28793818 H EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0002831|regulation of response to biotic stimulus GO:0006612|protein targeting to membrane GO:0006855|drug transmembrane transport GO:0006995|cellular response to nitrogen starvation GO:0009595|detection of biotic stimulus GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process GO:0009737|response to abscisic acid stimulus GO:0009817|defense response to fungus, incompatible interaction GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0015691|cadmium ion transport GO:0030003|cellular cation homeostasis GO:0031347|regulation of defense response GO:0031348|negative regulation of defense response GO:0042344|indole glucosinolate catabolic process GO:0042742|defense response to bacterium GO:0043900|regulation of multi-organism process GO:0050832|defense response to fungus GO:0052544|defense response by callose deposition in cell wall GO:0070838|divalent metal ion transport GO:0071366|cellular response to indolebutyric acid stimulus	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0015086|cadmium ion transmembrane transporter activity GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0005739|mitochondrion GO:0005774|vacuolar membrane GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009941|chloroplast envelope GO:0016020|membrane
pt2_01977	A	A1S	Potri.001G189600	Potri.001G189600(AS)	POPTR_0001s19040	sp|P10978|POLX_TOBAC	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1	NA	NA	LOC_Os02g37790.1	protein|retrotransposon protein, putative, unclassified, expressed	NA	NA	NA	NA	NA
pt2_01978	A	A1S	Potri.001G189700	Potri.001G189700(AS)	POPTR_0001s19050	sp|P51615|MAOX_VITVI	NADP-dependent malic enzyme OS=Vitis vinifera PE=2 SV=1	AT1G79750.1	| Symbols: ATNADP-ME4, NADP-ME4 | NADP-malic enzyme 4 | chr1:30007655-30011179 REVERSE LENGTH=646	LOC_Os01g52500.3	protein|NADP-dependent malic enzyme, putative, expressed	NA	NA	GO:0006094|gluconeogenesis GO:0006108|malate metabolic process GO:0006633|fatty acid biosynthetic process GO:0007010|cytoskeleton organization GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0010498|proteasomal protein catabolic process GO:0051289|protein homotetramerization GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0004470|malic enzyme activity GO:0004473|malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity GO:0008270|zinc ion binding GO:0016491|oxidoreductase activity GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0016619|malate dehydrogenase (oxaloacetate-decarboxylating) activity GO:0016652|oxidoreductase activity, acting on NADH or NADPH, NAD or NADP as acceptor GO:0042803|protein homodimerization activity GO:0046872|metal ion binding GO:0050897|cobalt ion binding GO:0051287|NAD binding	GO:0009507|chloroplast
pt2_01979	A	A1S	Potri.001G189800	Potri.001G189800(AS)	POPTR_0001s19070	sp|Q2V9B0|MY1R1_SOLTU	Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1	AT3G16350.1	| Symbols: | Homeodomain-like superfamily protein | chr3:5547828-5549397 FORWARD LENGTH=387	LOC_Os10g41200.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr5g037080.1	DIV1B protein chr5 15763383-15765765 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009651|response to salt stress GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009739|response to gibberellin stimulus GO:0009753|response to jasmonic acid stimulus GO:0046686|response to cadmium ion	GO:0003676|nucleic acid binding GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_01980	A	A1S	Potri.001G189900	Potri.001G189900(AS)	POPTR_0001s19080	sp|Q9LU15|AHP4_ARATH	Histidine-containing phosphotransfer protein 4 OS=Arabidopsis thaliana GN=AHP4 PE=1 SV=2	AT3G16360.2	| Symbols: AHP4 | HPT phosphotransmitter 4 | chr3:5554351-5555518 FORWARD LENGTH=145	LOC_Os01g54050.1	protein|histidine-containing phosphotransfer protein, putative, expressed	IMGA|Medtr1g089130.1	Histidine phosphotransfer protein chr1 24402259-24405326 F EGN_Mt100125 20111014	GO:0000160|two-component signal transduction system (phosphorelay) GO:0009736|cytokinin mediated signaling pathway GO:0080036|regulation of cytokinin mediated signaling pathway	GO:0004871|signal transducer activity GO:0009927|histidine phosphotransfer kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_01981	A	A1S	Potri.001G190000	Potri.001G190000(AS)	POPTR_0001s19090	sp|Q4U0S5|PAF1_DANRE	RNA polymerase II-associated factor 1 homolog OS=Danio rerio GN=paf1 PE=1 SV=1	AT1G79730.1	| Symbols: ELF7 | hydroxyproline-rich glycoprotein family protein | chr1:30000743-30003969 REVERSE LENGTH=589	LOC_Os08g06070.1	protein|ELF7, putative, expressed	NA	NA	GO:0009640|photomorphogenesis GO:0009910|negative regulation of flower development GO:0010388|cullin deneddylation GO:0016567|protein ubiquitination GO:0016571|histone methylation GO:0016579|protein deubiquitination GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_01982	A	A1S	Potri.001G190100	Potri.001G190100(AS)	POPTR_0001s19100	sp|Q9LIG0|Y3136_ARATH	Clavaminate synthase-like protein At3g21360 OS=Arabidopsis thaliana GN=At3g21360 PE=1 SV=1	AT3G21360.1	| Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr3:7522865-7524036 FORWARD LENGTH=330	LOC_Os01g09430.1	protein|expressed protein	NA	NA	GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity	GO:0005634|nucleus
pt2_01983	A	A1S	Potri.001G190200	Potri.001G190200(AS)	POPTR_0001s19110	sp|Q9SFT7|Y3707_ARATH	Serine/threonine-protein kinase At3g07070 OS=Arabidopsis thaliana GN=At3g07070 PE=2 SV=1	AT1G51940.1	| Symbols: | protein kinase family protein / peptidoglycan-binding LysM domain-containing protein | chr1:19296092-19298941 REVERSE LENGTH=651	LOC_Os01g53840.1	protein|protein kinase family protein, putative, expressed	IMGA|Medtr5g033490.1	Wall-associated receptor kinase-like protein chr5 13993068-13997047 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0007020|microtubule nucleation GO:0016998|cell wall macromolecule catabolic process	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_01984	A	A2S	Potri.001G190300	Potri.001G190300(AS) Potri.003G048100(DS)	POPTR_0001s19120	sp|Q8LAL2|IAA26_ARATH	Auxin-responsive protein IAA26 OS=Arabidopsis thaliana GN=IAA26 PE=1 SV=2	AT3G16500.1	| Symbols: PAP1, IAA26 | phytochrome-associated protein 1 | chr3:5612801-5614208 REVERSE LENGTH=269	LOC_Os02g13520.1	protein|OsIAA7 - Auxin-responsive Aux/IAA gene family member, expressed	IMGA|Medtr5g030710.1	Auxin-responsive protein (Aux/IAA) chr5 12699892-12694370 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006995|cellular response to nitrogen starvation GO:0009733|response to auxin stimulus	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_01985	A	A1S	Potri.001G190400	Potri.001G190400(AS)	POPTR_0001s19130	sp|Q9SEK2|HXK1_TOBAC	Hexokinase-1 OS=Nicotiana tabacum GN=HXK1 PE=2 SV=1	AT4G29130.1	| Symbols: ATHXK1, GIN2, HXK1 | hexokinase 1 | chr4:14352338-14354865 REVERSE LENGTH=496	LOC_Os05g45590.1	protein|hexokinase, putative, expressed	IMGA|Medtr5g009000.1	Hexokinase chr5 1801579-1806713 E EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0006096|glycolysis GO:0009747|hexokinase-dependent signaling GO:0010182|sugar mediated signaling pathway GO:0012501|programmed cell death	GO:0004340|glucokinase activity GO:0004396|hexokinase activity GO:0005524|ATP binding GO:0008865|fructokinase activity GO:0016773|phosphotransferase activity, alcohol group as acceptor	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009536|plastid GO:0031307|integral to mitochondrial outer membrane
pt2_01986	A	A1S	Potri.001G190500	Potri.001G190500(AS)	POPTR_0001s19140	NA	NA	AT3G16490.1	| Symbols: IQD26 | IQ-domain 26 | chr3:5603962-5605489 REVERSE LENGTH=389	LOC_Os01g09470.1	protein|IQ calmodulin-binding motif family protein, expressed	NA	NA	GO:0008150|biological_process	GO:0005516|calmodulin binding	GO:0005575|cellular_component GO:0005794|Golgi apparatus
pt2_01987	G	G1	NA	NA	POPTR_0001s19150	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01988	A	A1S	Potri.001G190700	Potri.001G190700(AS)	POPTR_0001s19160	NA	NA	AT5G56550.1	| Symbols: OXS3, ATOXS3 | oxidative stress 3 | chr5:22895847-22896502 REVERSE LENGTH=172	LOC_Os02g13370.1	protein|expressed protein	NA	NA	GO:0006950|response to stress GO:0006979|response to oxidative stress GO:0046686|response to cadmium ion	GO:0003674|molecular_function	GO:0005634|nucleus GO:0016607|nuclear speck
pt2_01989	A	A2S	Potri.001G190800	Potri.001G190800(AS) Potri.003G047700(DS)	POPTR_0001s19170	sp|Q941H7|PROF_LITCN	Profilin OS=Litchi chinensis PE=1 SV=1	AT2G19760.1	| Symbols: PFN1, PRF1 | profilin 1 | chr2:8517074-8518067 REVERSE LENGTH=131	LOC_Os06g05880.1	protein|profilin domain containing protein, expressed	NA	NA	GO:0007010|cytoskeleton organization GO:0007015|actin filament organization GO:0008154|actin polymerization or depolymerization GO:0009826|unidimensional cell growth GO:0009845|seed germination GO:0030036|actin cytoskeleton organization GO:0030041|actin filament polymerization GO:0051510|regulation of unidimensional cell growth GO:0090351|seedling development	GO:0003779|actin binding GO:0003785|actin monomer binding	GO:0005618|cell wall GO:0005634|nucleus GO:0005730|nucleolus GO:0005737|cytoplasm GO:0005819|spindle GO:0005829|cytosol GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0009507|chloroplast GO:0009524|phragmoplast GO:0015629|actin cytoskeleton GO:0048046|apoplast
pt2_01990	A	A1S	Potri.001G190900	Potri.001G190900(AS)	POPTR_0001s19175	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01991	A	A1S	Potri.001G191000	Potri.001G191000(AS)	POPTR_0001s19180	sp|P27061|PPA1_SOLLC	Acid phosphatase 1 OS=Solanum lycopersicum GN=APS1 PE=2 SV=1	AT4G25150.1	| Symbols: | HAD superfamily, subfamily IIIB acid phosphatase | chr4:12901736-12902882 REVERSE LENGTH=260	LOC_Os06g04790.1	protein|HAD superfamily phosphatase, putative, expressed	IMGA|contig_124001_1.1	Stem glycoprotein contig_124001 1093-869 H PREDN 20111014	NA	GO:0003993|acid phosphatase activity	GO:0009507|chloroplast
pt2_01992	A	A1S	Potri.001G191100	Potri.001G191100(AS)	POPTR_0001s19190	sp|P29677|MPPA_SOLTU	Mitochondrial-processing peptidase subunit alpha OS=Solanum tuberosum GN=MPP PE=1 SV=1	AT1G51980.1	| Symbols: | Insulinase (Peptidase family M16) protein | chr1:19323692-19326771 REVERSE LENGTH=503	LOC_Os01g53700.1	protein|mitochondrial-processing peptidase subunit, mitochondrial precursor, putative, expressed	NA	NA	GO:0006007|glucose catabolic process GO:0006096|glycolysis GO:0006098|pentose-phosphate shunt GO:0006508|proteolysis GO:0009060|aerobic respiration GO:0009651|response to salt stress GO:0046686|response to cadmium ion	GO:0003824|catalytic activity GO:0004222|metalloendopeptidase activity GO:0005524|ATP binding GO:0008270|zinc ion binding GO:0046872|metal ion binding	GO:0005739|mitochondrion GO:0005750|mitochondrial respiratory chain complex III GO:0005774|vacuolar membrane GO:0009507|chloroplast GO:0009536|plastid GO:0016020|membrane
pt2_01993	A	A1S	Potri.T147100	Potri.T147100(AS)	POPTR_0001s19200	sp|P37572|RADA_BACSU	DNA repair protein RadA homolog OS=Bacillus subtilis (strain 168) GN=radA PE=3 SV=1	AT5G50340.1	| Symbols: | ATP-dependent peptidases;nucleotide binding;serine-type endopeptidases;DNA helicases;ATP binding;damaged DNA binding;nucleoside-triphosphatases | chr5:20491635-20495830 REVERSE LENGTH=587	LOC_Os06g05820.1	protein|OsLonP2 - Putative Lon protease homologue, expressed	NA	NA	GO:0006260|DNA replication GO:0006281|DNA repair GO:0006508|proteolysis	GO:0000166|nucleotide binding GO:0003678|DNA helicase activity GO:0003684|damaged DNA binding GO:0004176|ATP-dependent peptidase activity GO:0004252|serine-type endopeptidase activity GO:0005524|ATP binding GO:0017111|nucleoside-triphosphatase activity	GO:0005575|cellular_component GO:0005737|cytoplasm GO:0009295|nucleoid
pt2_01994	A	A1S	Potri.001G191300	Potri.001G191300(AS)	POPTR_0001s19210	sp|Q9LI74|CHUP1_ARATH	Protein CHUP1, chloroplastic OS=Arabidopsis thaliana GN=CHUP1 PE=1 SV=1	AT1G52080.1	| Symbols: AR791 | actin binding protein family | chr1:19369788-19371862 FORWARD LENGTH=573	LOC_Os05g09380.2	protein|AR791, putative, expressed	IMGA|Medtr5g053270.1	Protein CHUP1 chr5 21417069-21422285 E EGN_Mt100125 20111014	NA	GO:0003779|actin binding	GO:0005739|mitochondrion
pt2_01995	A	A1S	Potri.001G191400	Potri.001G191400(AS)	POPTR_0001s19220	sp|Q9LU14|APG2_ARATH	GDSL esterase/lipase APG OS=Arabidopsis thaliana GN=APG PE=1 SV=1	AT3G16370.1	| Symbols: | GDSL-like Lipase/Acylhydrolase superfamily protein | chr3:5556928-5558351 FORWARD LENGTH=353	LOC_Os06g05550.1	protein|GDSL-like lipase/acylhydrolase, putative, expressed	IMGA|Medtr5g084750.1	GDSL esterase/lipase chr5 35552357-35561949 E EGN_Mt100125 20111014	GO:0000038|very long-chain fatty acid metabolic process GO:0000271|polysaccharide biosynthetic process GO:0006629|lipid metabolic process GO:0007389|pattern specification process GO:0008361|regulation of cell size GO:0009664|plant-type cell wall organization GO:0009825|multidimensional cell growth GO:0009926|auxin polar transport GO:0009932|cell tip growth GO:0010015|root morphogenesis GO:0010817|regulation of hormone levels GO:0040007|growth GO:0042335|cuticle development GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0048767|root hair elongation GO:0071555|cell wall organization	GO:0004091|carboxylesterase activity GO:0016788|hydrolase activity, acting on ester bonds	GO:0005576|extracellular region GO:0048046|apoplast
pt2_01996	A	A1S	Potri.001G191500	Potri.001G191500(AS)	POPTR_0001s19230	sp|P11940|PABP1_HUMAN	Polyadenylate-binding protein 1 OS=Homo sapiens GN=PABPC1 PE=1 SV=2	AT3G16380.1	| Symbols: PAB6 | poly(A) binding protein 6 | chr3:5558676-5560993 REVERSE LENGTH=537	LOC_Os08g22354.2	protein|polyadenylate-binding protein, putative, expressed	IMGA|Medtr1g019150.1	Polyadenylate-binding protein chr1 5864665-5869890 F EGN_Mt100125 20111014	GO:0006413|translational initiation GO:0016071|mRNA metabolic process	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding GO:0003743|translation initiation factor activity	NA
pt2_01997	A	A2S	Potri.001G191600	Potri.001G191600(AS) Potri.006G144400(BS)	POPTR_0001s19240	sp|Q9LU14|APG2_ARATH	GDSL esterase/lipase APG OS=Arabidopsis thaliana GN=APG PE=1 SV=1	AT3G16370.1	| Symbols: | GDSL-like Lipase/Acylhydrolase superfamily protein | chr3:5556928-5558351 FORWARD LENGTH=353	LOC_Os06g05550.1	protein|GDSL-like lipase/acylhydrolase, putative, expressed	IMGA|Medtr5g084750.1	GDSL esterase/lipase chr5 35552357-35561949 E EGN_Mt100125 20111014	GO:0000038|very long-chain fatty acid metabolic process GO:0000271|polysaccharide biosynthetic process GO:0006629|lipid metabolic process GO:0007389|pattern specification process GO:0008361|regulation of cell size GO:0009664|plant-type cell wall organization GO:0009825|multidimensional cell growth GO:0009926|auxin polar transport GO:0009932|cell tip growth GO:0010015|root morphogenesis GO:0010817|regulation of hormone levels GO:0040007|growth GO:0042335|cuticle development GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0048767|root hair elongation GO:0071555|cell wall organization	GO:0004091|carboxylesterase activity GO:0016788|hydrolase activity, acting on ester bonds	GO:0005576|extracellular region GO:0048046|apoplast
pt2_01998	C	C1S	Potri.001G191700	Potri.001G191700(CS)	sp|C0LGG6|Y5189_ARATH	Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana GN=At1g51890 PE=2 SV=2	AT1G51890.2	| Symbols: | Leucine-rich repeat protein kinase family protein | chr1:19274802-19278528 REVERSE LENGTH=828	LOC_Os09g09220.1	protein|protein kinase domain containing protein, expressed	IMGA|Medtr5g058090.1	Receptor-like protein kinase chr5 23323996-23335232 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_01999	A	A1S	Potri.001G191800	Potri.001G191800(AS)	POPTR_0001s19250	sp|Q8S3D2|BH087_ARATH	Transcription factor bHLH87 OS=Arabidopsis thaliana GN=BHLH87 PE=2 SV=1	AT3G21330.1	| Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr3:7507720-7508841 FORWARD LENGTH=373	LOC_Os01g51140.1	protein|helix-loop-helix DNA-binding domain containing protein, expressed	IMGA|Medtr5g017210.1	Transcription factor HEC2 chr5 6002060-6002803 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_02000	A	A2S	Potri.001G191900	Potri.001G191900(AS) Potri.003G032400(DS)	POPTR_0001s19260	sp|Q9SSC9|AHP6_ARATH	Histidine-containing phosphotransfer protein 6 OS=Arabidopsis thaliana GN=AHP6 PE=2 SV=2	AT1G80100.1	| Symbols: AHP6, HP6 | histidine phosphotransfer protein 6 | chr1:30133818-30134652 FORWARD LENGTH=154	LOC_Os08g44350.1	protein|histidine-containing phosphotransfer protein, putative, expressed	IMGA|Medtr1g089130.1	Histidine phosphotransfer protein chr1 24402259-24405326 F EGN_Mt100125 20111014	GO:0000160|two-component signal transduction system (phosphorelay) GO:0009735|response to cytokinin stimulus GO:0009736|cytokinin mediated signaling pathway GO:0010089|xylem development	GO:0004871|signal transducer activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_02001	A	A2S	Potri.001G192000	Potri.001G192000(AS) Potri.003G032500(DS)	POPTR_0001s19270	sp|Q9LVZ8|LOR12_ARATH	Protein LURP-one-related 12 OS=Arabidopsis thaliana GN=At3g15810 PE=2 SV=1	AT3G15810.1	| Symbols: | Protein of unknown function (DUF567) | chr3:5348054-5349178 REVERSE LENGTH=220	LOC_Os01g56450.1	protein|DUF567 domain containing protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_02002	A	A1S	Potri.001G192100	Potri.001G192100(AS)	POPTR_0001s19280	sp|P29602|CPC_CUCSA	Cucumber peeling cupredoxin OS=Cucumis sativus PE=1 SV=3	AT5G20230.1	| Symbols: ATBCB, BCB, SAG14 | blue-copper-binding protein | chr5:6826626-6827408 FORWARD LENGTH=196	LOC_Os06g11490.1	protein|plastocyanin-like domain containing protein, putative, expressed	IMGA|Medtr5g006040.1	Early nodulin-like protein chr5 502223-501280 F EGN_Mt100125 20111014	GO:0006979|response to oxidative stress GO:0009611|response to wounding GO:0009620|response to fungus GO:0009646|response to absence of light GO:0009695|jasmonic acid biosynthetic process GO:0009753|response to jasmonic acid stimulus GO:0015690|aluminum cation transport GO:0050832|defense response to fungus	GO:0005507|copper ion binding GO:0009055|electron carrier activity	GO:0005773|vacuole GO:0005886|plasma membrane GO:0031225|anchored to membrane GO:0046658|anchored to plasma membrane
pt2_02003	A	A1S	Potri.001G192200	Potri.001G192200(AS)	POPTR_0001s19290	sp|Q9ZQG9|E1314_ARATH	Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis thaliana GN=At2g27500 PE=1 SV=2	AT3G15800.1	| Symbols: | Glycosyl hydrolase superfamily protein | chr3:5345051-5346988 FORWARD LENGTH=399	LOC_Os02g10660.1	protein|glycosyl hydrolases family 17, putative, expressed	IMGA|Medtr5g085580.1	"Glucan endo-1,3-beta-glucosidase" chr5 35975309-35973056 F EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0043169|cation binding	GO:0031225|anchored to membrane
pt2_02004	A	A1S	Potri.001G192300	Potri.001G192300(AS)	POPTR_0001s19300	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02005	A	A1S	Potri.001G192500	Potri.001G192500(AS)	POPTR_0001s19310	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process GO:0045892|negative regulation of transcription, DNA-dependent	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_02006	A	A1S	Potri.001G192600	Potri.001G192600(AS)	POPTR_0001s19320	sp|Q9SSQ8|HS26M_ARATH	26.5 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP26.5 PE=2 SV=1	AT1G52560.1	| Symbols: | HSP20-like chaperones superfamily protein | chr1:19574783-19575766 REVERSE LENGTH=232	LOC_Os02g10710.1	protein|hsp20/alpha crystallin family protein, putative, expressed	NA	NA	GO:0006457|protein folding GO:0009408|response to heat GO:0009644|response to high light intensity GO:0010286|heat acclimation GO:0042542|response to hydrogen peroxide	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_02007	A	A1S	Potri.001G192700	Potri.001G192700(AS)	POPTR_0001s19330	NA	NA	AT5G25360.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1). | chr5:8799934-8802333 REVERSE LENGTH=169	LOC_Os02g10720.1	protein|expressed protein	IMGA|Medtr1g012480.1	hypothetical protein chr1 2929273-2931257 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_02008	A	A1S	Potri.001G192800	Potri.001G192800(AS)	POPTR_0001s19340	NA	NA	AT1G52565.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15760.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr1:19580061-19580511 REVERSE LENGTH=129	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_02009	A	A1S	Potri.001G192900	Potri.001G192900(AS)	POPTR_0001s19350	NA	NA	AT3G17450.1	| Symbols: | hAT dimerisation domain-containing protein | chr3:5972793-5975684 REVERSE LENGTH=877	LOC_Os09g32380.1	protein|transposon protein, putative, unclassified, expressed	IMGA|Medtr5g012510.1	hypothetical protein chr5 3512350-3509693 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003677|DNA binding GO:0046983|protein dimerization activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02010	A	A1S	Potri.001G193000	Potri.001G193000(AS)	POPTR_0001s19360	sp|Q41142|PLDA1_RICCO	Phospholipase D alpha 1 OS=Ricinus communis GN=PLD1 PE=1 SV=1	AT1G52570.1	| Symbols: PLDALPHA2 | phospholipase D alpha 2 | chr1:19583940-19586551 REVERSE LENGTH=810	LOC_Os01g07760.2	protein|phospholipase D, putative, expressed	IMGA|Medtr5g011060.1	Phospholipase D chr5 2878311-2874091 H EGN_Mt100125 20111014	GO:0006094|gluconeogenesis GO:0006096|glycolysis GO:0006631|fatty acid metabolic process GO:0006833|water transport GO:0006972|hyperosmotic response GO:0007030|Golgi organization GO:0008152|metabolic process GO:0009266|response to temperature stimulus GO:0009651|response to salt stress GO:0009737|response to abscisic acid stimulus GO:0009789|positive regulation of abscisic acid mediated signaling pathway GO:0009845|seed germination GO:0010119|regulation of stomatal movement GO:0046470|phosphatidylcholine metabolic process GO:0046686|response to cadmium ion GO:0048767|root hair elongation	GO:0003824|catalytic activity GO:0004630|phospholipase D activity GO:0005509|calcium ion binding GO:0005515|protein binding GO:0005546|phosphatidylinositol-4,5-bisphosphate binding	GO:0005634|nucleus GO:0005739|mitochondrion GO:0005829|cytosol GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0009507|chloroplast GO:0009941|chloroplast envelope GO:0016020|membrane GO:0030136|clathrin-coated vesicle
pt2_02011	A	A1S	Potri.001G193100	Potri.001G193100(AS)	POPTR_0001s19370	NA	NA	AT1G15370.1	| Symbols: | SNARE-like superfamily protein | chr1:5287135-5288375 FORWARD LENGTH=147	LOC_Os03g63910.1	protein|PPR repeat domain containing protein, putative, expressed	NA	NA	GO:0006810|transport	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_02012	A	A1S	Potri.001G193200	Potri.001G193200(AS)	POPTR_0001s19380	sp|Q8LBH4|SPX1_ARATH	SPX domain-containing protein 1 OS=Arabidopsis thaliana GN=SPX1 PE=2 SV=2	AT5G20150.1	| Symbols: ATSPX1, SPX1 | SPX domain gene 1 | chr5:6802429-6803367 FORWARD LENGTH=256	LOC_Os06g40120.1	protein|SPX domain containing protein, putative, expressed	IMGA|Medtr1g012440.1	Vacuolar transporter chaperone chr1 2914381-2911347 F EGN_Mt100125 20111014	GO:0006817|phosphate ion transport GO:0016036|cellular response to phosphate starvation GO:0019375|galactolipid biosynthetic process GO:0045892|negative regulation of transcription, DNA-dependent GO:0080040|positive regulation of cellular response to phosphate starvation	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_02013	A	A1S	Potri.001G193300	Potri.001G193300(AS)	POPTR_0001s19390	sp|Q499P8|CP058_RAT	UPF0420 protein C16orf58 homolog OS=Rattus norvegicus PE=2 SV=1	AT3G45890.1	| Symbols: RUS1 | Protein of unknown function, DUF647 | chr3:16871697-16874100 FORWARD LENGTH=608	LOC_Os04g22360.1	protein|DUF647 domain containing protein, putative, expressed	IMGA|Medtr5g025160.1	hypothetical protein chr5 9942962-9949542 E EGN_Mt100125 20111014	GO:0010224|response to UV-B GO:0032502|developmental process	NA	GO:0005739|mitochondrion GO:0009536|plastid GO:0009941|chloroplast envelope
pt2_02014	A	A2S	Potri.001G193400	Potri.001G193400(AS) Potri.003G033300(BS)	POPTR_0001s19410	NA	NA	AT4G19160.2	| Symbols: | unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr4:10477772-10479947 FORWARD LENGTH=453	NA	NA	NA	NA	GO:0008150|biological_process	NA	GO:0005634|nucleus GO:0009507|chloroplast
pt2_02015	A	A1S	Potri.001G193500	Potri.001G193500(AS)	POPTR_0001s19420	NA	NA	AT5G62200.1	| Symbols: | Embryo-specific protein 3, (ATS3) | chr5:24984463-24985674 REVERSE LENGTH=190	LOC_Os01g07780.1	protein|embryo-specific 3, putative, expressed	IMGA|Medtr1g102420.1	Embryo-specific protein chr1 30477947-30475519 F EGN_Mt100125 20111014	GO:0008150|biological_process GO:0009611|response to wounding GO:0009695|jasmonic acid biosynthetic process	GO:0003674|molecular_function	GO:0005774|vacuolar membrane GO:0031225|anchored to membrane
pt2_02016	A	A1S	Potri.001G193600	Potri.001G193600(AS)	POPTR_0001s19430	sp|Q9S1F9|DHE4_PSYT1	NADP-specific glutamate dehydrogenase OS=Psychrobacter sp. (strain TAD1) GN=gdhA PE=1 SV=4	AT1G51720.1	| Symbols: | Amino acid dehydrogenase family protein | chr1:19181741-19186297 FORWARD LENGTH=637	LOC_Os01g37760.1	protein|glutamate dehydrogenase protein, putative, expressed	NA	NA	GO:0006520|cellular amino acid metabolic process GO:0008295|spermidine biosynthetic process GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0016491|oxidoreductase activity	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_02017	A	A2S	Potri.001G193700	Potri.001G193700(AS) Potri.001G199500(BS)	POPTR_0001s19440	sp|Q9CQK7|RWDD1_MOUSE	RWD domain-containing protein 1 OS=Mus musculus GN=Rwdd1 PE=1 SV=1	AT1G51730.1	| Symbols: | Ubiquitin-conjugating enzyme family protein | chr1:19186812-19188638 REVERSE LENGTH=252	LOC_Os01g37770.1	protein|RWD domain containing protein, expressed	IMGA|contig_84992_1.1	RWD domain-containing protein contig_84992 235-725 E PREDN 20111014	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_02018	A	A2S	Potri.001G193700	Potri.001G193700(AS) Potri.001G199500(BS)	POPTR_0001s19450	sp|Q9CQK7|RWDD1_MOUSE	RWD domain-containing protein 1 OS=Mus musculus GN=Rwdd1 PE=1 SV=1	AT1G51730.1	| Symbols: | Ubiquitin-conjugating enzyme family protein | chr1:19186812-19188638 REVERSE LENGTH=252	LOC_Os01g37770.1	protein|RWD domain containing protein, expressed	IMGA|contig_84992_1.1	RWD domain-containing protein contig_84992 235-725 E PREDN 20111014	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_02019	A	A2S	Potri.001G193700	Potri.001G193700(AS) Potri.001G199500(BS)	POPTR_0001s19450	sp|Q9CQK7|RWDD1_MOUSE	RWD domain-containing protein 1 OS=Mus musculus GN=Rwdd1 PE=1 SV=1	AT1G51730.1	| Symbols: | Ubiquitin-conjugating enzyme family protein | chr1:19186812-19188638 REVERSE LENGTH=252	LOC_Os01g37770.1	protein|RWD domain containing protein, expressed	IMGA|contig_84992_1.1	RWD domain-containing protein contig_84992 235-725 E PREDN 20111014	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_02020	A	A1S	Potri.001G193800	Potri.001G193800(AS)	POPTR_0001s19460	NA	NA	AT2G01050.1	| Symbols: | zinc ion binding;nucleic acid binding | chr2:68337-69884 REVERSE LENGTH=515	NA	NA	IMGA|Medtr1g023970.1	hypothetical protein chr1 7481287-7479242 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003676|nucleic acid binding GO:0008270|zinc ion binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02021	G	G1	NA	NA	POPTR_0001s19470	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02022	A	A1S	Potri.001G193900	Potri.001G193900(AS)	POPTR_0001s19480	sp|P59278|Y1745_ARATH	Uncharacterized protein At1g51745 OS=Arabidopsis thaliana GN=At1g51745 PE=2 SV=2	AT1G51745.1	| Symbols: | Tudor/PWWP/MBT superfamily protein | chr1:19192055-19194375 FORWARD LENGTH=563	LOC_Os01g37790.1	protein|expressed protein	IMGA|Medtr5g007980.1	hypothetical protein chr5 1385906-1380423 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02023	A	A1S	Potri.001G193900	Potri.001G193900(AS)	POPTR_0001s19480	sp|P59278|Y1745_ARATH	Uncharacterized protein At1g51745 OS=Arabidopsis thaliana GN=At1g51745 PE=2 SV=2	AT1G51745.1	| Symbols: | Tudor/PWWP/MBT superfamily protein | chr1:19192055-19194375 FORWARD LENGTH=563	LOC_Os01g37790.1	protein|expressed protein	IMGA|Medtr5g007980.1	hypothetical protein chr5 1385906-1380423 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02024	A	A3S	Potri.001G194000	Potri.001G194000(AS) Potri.T165500(DS) Potri.003G045500(DS)	POPTR_0001s19490	sp|O82204|RL281_ARATH	60S ribosomal protein L28-1 OS=Arabidopsis thaliana GN=RPL28A PE=1 SV=1	AT2G19730.3	| Symbols: | Ribosomal L28e protein family | chr2:8511752-8512995 FORWARD LENGTH=143	LOC_Os01g51020.1	protein|60S ribosomal protein L28-1, putative, expressed	NA	NA	GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005618|cell wall GO:0005622|intracellular GO:0005840|ribosome GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0009507|chloroplast GO:0022625|cytosolic large ribosomal subunit GO:0022626|cytosolic ribosome
pt2_02025	A	A1S	Potri.001G194100	Potri.001G194100(AS)	POPTR_0001s19500	NA	NA	NA	NA	LOC_Os01g37810.1	protein|expressed protein	IMGA|contig_8938_1.1	Unknown protein contig_8938 293-1155 F PREDN 20111014	NA	NA	NA
pt2_02026	A	A1S	Potri.001G194200	Potri.001G194200(AS)	POPTR_0001s19510	sp|A0MFS9|CACLC_ARATH	Anoctamin-like protein At1g73020 OS=Arabidopsis thaliana GN=At1g73020 PE=2 SV=1	AT1G73020.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF590 (InterPro:IPR007632). | chr1:27469714-27473181 REVERSE LENGTH=665	LOC_Os01g51040.1	protein|transmembrane protein 16K, putative, expressed	IMGA|contig_8938_3.1	Anoctamin-like protein contig_8938 5965-2935 H PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_02027	A	A1S	Potri.001G194300	Potri.001G194300(AS)	POPTR_0001s19520	sp|A0MFS9|CACLC_ARATH	Anoctamin-like protein At1g73020 OS=Arabidopsis thaliana GN=At1g73020 PE=2 SV=1	AT1G73020.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF590 (InterPro:IPR007632). | chr1:27469714-27473181 REVERSE LENGTH=665	LOC_Os01g51040.1	protein|transmembrane protein 16K, putative, expressed	IMGA|contig_8938_3.1	Anoctamin-like protein contig_8938 5965-2935 H PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_02028	A	A2S	Potri.001G194400	Potri.001G194400(AS) Potri.003G045300(BS)	POPTR_0001s19530	sp|O96552|CHMP1_DICDI	Charged multivesicular body protein 1 OS=Dictyostelium discoideum GN=chmp1 PE=3 SV=1	AT1G73030.1	| Symbols: VPS46.2, CHMP1A | SNF7 family protein | chr1:27473938-27474848 FORWARD LENGTH=203	LOC_Os06g43590.3	protein|SNF7 domain containing protein, putative, expressed	NA	NA	GO:0000578|embryonic axis specification GO:0009790|embryo development GO:0015031|protein transport GO:0016192|vesicle-mediated transport GO:0032509|endosome transport via multivesicular body sorting pathway GO:0040007|growth	NA	NA
pt2_02029	A	A2S	Potri.001G194500	Potri.001G194500(AS) Potri.004G215600(BS)	POPTR_0001s19730	NA	NA	AT2G28120.1	| Symbols: | Major facilitator superfamily protein | chr2:11985934-11987667 FORWARD LENGTH=577	LOC_Os07g09010.1	protein|nodulin, putative, expressed	IMGA|Medtr5g022380.1	hypothetical protein chr5 8564572-8561479 E EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0055085|transmembrane transport	NA	GO:0005886|plasma membrane GO:0016021|integral to membrane
pt2_02030	A	A1S	Potri.001G194600	Potri.001G194600(AS)	POPTR_0001s19740	NA	NA	AT2G01050.1	| Symbols: | zinc ion binding;nucleic acid binding | chr2:68337-69884 REVERSE LENGTH=515	LOC_Os06g28660.1	protein|retrotransposon protein, putative, unclassified, expressed	IMGA|Medtr5g062140.1	hypothetical protein chr5 25005759-25007108 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003676|nucleic acid binding GO:0008270|zinc ion binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02031	A	A1S	Potri.001G195200	Potri.001G195200(AS)	POPTR_0001s19950	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02032	A	A1S	Potri.001G195000	Potri.001G195000(AS)	POPTR_0001s19960	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02033	A	A1S	Potri.001G194900	Potri.001G194900(AS)	POPTR_0001s19970	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02034	A	A1S	Potri.001G194700	Potri.001G194700(AS)	POPTR_0001s19980	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02035	A	A1S	Potri.001G195300	Potri.001G195300(AS)	POPTR_0001s19990	sp|Q8KGF9|Y009_CHLTE	Uncharacterized RNA methyltransferase CT0009 OS=Chlorobium tepidum (strain ATCC 49652 / DSM 12025 / TLS) GN=CT0009 PE=3 SV=1	AT3G21300.1	| Symbols: | RNA methyltransferase family protein | chr3:7493654-7496257 REVERSE LENGTH=554	LOC_Os01g09750.2	protein|RNA methyltransferase protein, putative, expressed	NA	NA	GO:0006396|RNA processing	GO:0003723|RNA binding GO:0008173|RNA methyltransferase activity	GO:0005737|cytoplasm
pt2_02036	A	A1S	Potri.001G195300	Potri.001G195300(AS)	POPTR_0001s19990	sp|Q8KGF9|Y009_CHLTE	Uncharacterized RNA methyltransferase CT0009 OS=Chlorobium tepidum (strain ATCC 49652 / DSM 12025 / TLS) GN=CT0009 PE=3 SV=1	AT3G21300.1	| Symbols: | RNA methyltransferase family protein | chr3:7493654-7496257 REVERSE LENGTH=554	LOC_Os01g09750.2	protein|RNA methyltransferase protein, putative, expressed	NA	NA	GO:0006396|RNA processing	GO:0003723|RNA binding GO:0008173|RNA methyltransferase activity	GO:0005737|cytoplasm
pt2_02037	A	A1S	Potri.001G195400	Potri.001G195400(AS)	POPTR_0001s20000	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02038	C	C1S	Potri.001G195500	Potri.001G195500(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02039	A	A1S	Potri.001G195600	Potri.001G195600(AS)	POPTR_0001s20020	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02040	A	A2S	Potri.001G195700	Potri.001G195700(AS) Potri.015G137800(DS)	POPTR_0001s20030	NA	NA	AT5G05800.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 881 Blast hits to 512 proteins in 30 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 38; Plants - 833; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). | chr5:1743234-1744751 REVERSE LENGTH=449	LOC_Os04g16940.1	protein|transposon protein, putative, CACTA, En/Spm sub-class, expressed	NA	NA	GO:0008150|biological_process GO:0048573|photoperiodism, flowering	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_02041	A	A1S	Potri.001G195800	Potri.001G195800(AS)	POPTR_0001s20040	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02042	A	A1S	Potri.001G195900	Potri.001G195900(AS)	POPTR_0001s20050	NA	NA	AT3G21310.1	| Symbols: | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein | chr3:7497774-7499011 FORWARD LENGTH=383	LOC_Os03g52120.1	protein|DNA binding protein, putative, expressed	IMGA|Medtr5g055480.1	hypothetical protein chr5 22301699-22299299 E EGN_Mt100125 20111014	NA	GO:0016757|transferase activity, transferring glycosyl groups	GO:0005739|mitochondrion GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0016020|membrane
pt2_02043	A	A1S	Potri.001G196000	Potri.001G196000(AS)	POPTR_0001s20060	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006508|proteolysis GO:0008152|metabolic process GO:0009611|response to wounding	GO:0008237|metallopeptidase activity GO:0010179|IAA-Ala conjugate hydrolase activity GO:0016787|hydrolase activity	GO:0005783|endoplasmic reticulum GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_02044	A	A9S	Potri.001G196200	Potri.001G196200(AS) Potri.018G074000(BS) Potri.006G151700(BS) Potri.004G053900(BS) Potri.018G052800(BS) Potri.018G032800(DS) Potri.002G009500(DS) Potri.011G091500(DS) Potri.004G137300(DS)	POPTR_0001s20070	NA	NA	AT5G33406.1	| Symbols: | hAT dimerisation domain-containing protein / transposase-related | chr5:12676126-12678403 REVERSE LENGTH=509	LOC_Os12g35220.1	protein|transposon protein, putative, Ac/Ds sub-class, expressed	IMGA|Medtr5g012510.1	hypothetical protein chr5 3512350-3509693 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003677|DNA binding GO:0046983|protein dimerization activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02045	D	D2S	Potri.003G039900	Potri.003G039900(DS) Potri.003G037100(DS)	POPTR_0001s20090	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_02046	A	A1S	Potri.001G196300	Potri.001G196300(AS)	POPTR_0001s20100	NA	NA	AT1G55080.1	| Symbols: MED9 | MED9; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G29580.1); Has 67203 Blast hits to 25757 proteins in 1293 species: Archae - 12; Bacteria - 4374; Metazoa - 24340; Fungi - 7940; Plants - 5927; Viruses - 273; Other Eukaryotes - 24337 (source: NCBI BLink). | chr1:20553121-20554174 REVERSE LENGTH=244	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0016592|mediator complex
pt2_02047	A	A1S	Potri.001G196400	Potri.001G196400(AS)	POPTR_0001s20110	sp|Q9LRW1|LBD22_ARATH	LOB domain-containing protein 22 OS=Arabidopsis thaliana GN=LBD22 PE=2 SV=1	AT3G13850.1	| Symbols: LBD22 | LOB domain-containing protein 22 | chr3:4559910-4560716 FORWARD LENGTH=268	LOC_Os08g31080.1	protein|DUF260 domain containing protein, putative, expressed	IMGA|contig_56252_1.1	LOB domain protein contig_56252 2437-1246 H PREDN 20111014	GO:0008150|biological_process	NA	GO:0005634|nucleus
pt2_02048	A	A1S	Potri.001G196500	Potri.001G196500(AS)	POPTR_0001s20310	sp|O94432|YHKF_SCHPO	Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC660.15 PE=2 SV=1	AT1G17640.1	| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr1:6067394-6069098 REVERSE LENGTH=369	LOC_Os02g12850.1	protein|RNA recognition motif containing protein, expressed	IMGA|Medtr5g097580.1	Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like protein chr5 41711192-41715991 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_02049	A	A1S	Potri.001G196600	Potri.001G196600(AS)	POPTR_0001s20320	sp|Q9LEV0|PPP7I_ARATH	Serine/threonine-protein phosphatase 7 inactive homolog OS=Arabidopsis thaliana GN=At5g10900 PE=3 SV=1	AT5G10900.1	| Symbols: | Calcineurin-like metallo-phosphoesterase superfamily protein | chr5:3436413-3439221 REVERSE LENGTH=600	LOC_Os08g40200.1	protein|Ser/Thr protein phosphatase family protein, putative, expressed	IMGA|Medtr1g079950.1	Serine/threonine protein phosphatase PP1 chr1 20043884-20051001 F EGN_Mt100125 20111014	GO:0009408|response to heat GO:0009785|blue light signaling pathway	GO:0004722|protein serine/threonine phosphatase activity GO:0016787|hydrolase activity	GO:0005575|cellular_component GO:0005634|nucleus GO:0005737|cytoplasm
pt2_02050	A	A1S	Potri.001G196700	Potri.001G196700(AS)	POPTR_0001s20330	NA	NA	AT3G13780.1	| Symbols: | SMAD/FHA domain-containing protein | chr3:4525108-4526214 FORWARD LENGTH=309	LOC_Os06g36940.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02051	G	G1	NA	NA	POPTR_0001s20340	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02052	A	A1S	Potri.001G196800	Potri.001G196800(AS)	POPTR_0001s20350	sp|A1VY14|SURE_CAMJJ	5'-nucleotidase SurE OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=surE PE=3 SV=1	AT1G72880.1	| Symbols: | Survival protein SurE-like phosphatase/nucleotidase | chr1:27423678-27425928 REVERSE LENGTH=385	LOC_Os01g51280.1	protein|5-nucleotidase surE, putative, expressed	IMGA|Medtr5g006290.1	5'-nucleotidase surE chr5 612036-607992 F EGN_Mt100125 20111014	NA	GO:0003993|acid phosphatase activity GO:0016787|hydrolase activity	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_02053	A	A1S	Potri.001G196900	Potri.001G196900(AS)	POPTR_0001s20360	NA	NA	NA	NA	LOC_Os01g35820.1	protein|retrotransposon protein, putative, unclassified, expressed	NA	NA	NA	NA	NA
pt2_02054	A	A1S	Potri.001G197000	Potri.001G197000(AS)	POPTR_0001s20370	sp|Q8LPH6|MYB86_ARATH	Transcription factor MYB86 OS=Arabidopsis thaliana GN=MYB86 PE=2 SV=1	AT3G13890.2	| Symbols: MYB26 | myb domain protein 26 | chr3:4576744-4578027 REVERSE LENGTH=358	LOC_Os01g51260.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr5g010020.2	40S ribosomal protein S10-like protein chr5 2353539-2367303 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009739|response to gibberellin stimulus GO:0009901|anther dehiscence	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_02055	C	C1S	Potri.001G197100	Potri.001G197100(CS)	NA	NA	AT1G72670.1	| Symbols: iqd8 | IQ-domain 8 | chr1:27356898-27358657 REVERSE LENGTH=414	LOC_Os01g09790.1	protein|IQ calmodulin-binding motif domain containing protein, expressed	NA	NA	GO:0000226|microtubule cytoskeleton organization GO:0008150|biological_process	GO:0005516|calmodulin binding	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_02056	A	A2S	Potri.001G197200	Potri.001G197200(AS) Potri.003G043200(DS)	POPTR_0001s20390	sp|Q84LG4|COPZ2_ARATH	Coatomer subunit zeta-2 OS=Arabidopsis thaliana GN=At3g09800 PE=2 SV=1	AT4G08520.1	| Symbols: | SNARE-like superfamily protein | chr4:5417887-5420295 FORWARD LENGTH=181	LOC_Os02g21250.2	protein|clathrin adaptor complex small chain domain containing protein, expressed	NA	NA	GO:0006457|protein folding GO:0006810|transport GO:0006886|intracellular protein transport GO:0009408|response to heat GO:0009644|response to high light intensity GO:0034976|response to endoplasmic reticulum stress GO:0042542|response to hydrogen peroxide GO:0045893|positive regulation of transcription, DNA-dependent	NA	GO:0005886|plasma membrane GO:0030125|clathrin vesicle coat
pt2_02057	A	A2S	Potri.001G197300	Potri.001G197300(AS) Potri.003G034300(DS)	POPTR_0001s20400	sp|Q39247|2ABB_ARATH	Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform OS=Arabidopsis thaliana GN=PP2AB2 PE=2 SV=1	AT1G17720.2	| Symbols: ATB BETA | Protein phosphatase 2A, regulatory subunit PR55 | chr1:6093949-6098065 REVERSE LENGTH=500	LOC_Os02g13110.1	protein|serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed	IMGA|Medtr1g040810.1	Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform chr1 11248594-11250096 H EGN_Mt100125 20111014	GO:0006470|protein dephosphorylation GO:0007165|signal transduction	GO:0000166|nucleotide binding GO:0008601|protein phosphatase type 2A regulator activity	GO:0000159|protein phosphatase type 2A complex GO:0005737|cytoplasm GO:0005829|cytosol
pt2_02058	A	A1S	Potri.001G197400	Potri.001G197400(AS)	POPTR_0001s20410	sp|Q84WC6|UBP7_ARATH	Ubiquitin carboxyl-terminal hydrolase 7 OS=Arabidopsis thaliana GN=UBP7 PE=1 SV=1	AT3G21280.1	| Symbols: UBP7 | ubiquitin-specific protease 7 | chr3:7478166-7482037 REVERSE LENGTH=532	LOC_Os01g36930.1	protein|ubiquitin carboxyl-terminal hydrolase 6, putative, expressed	NA	NA	GO:0006511|ubiquitin-dependent protein catabolic process	GO:0004221|ubiquitin thiolesterase activity GO:0004843|ubiquitin-specific protease activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02059	D	D1S	Potri.019G042000	Potri.019G042000(DS)	POPTR_0001s20430	NA	NA	NA	NA	LOC_Os08g17750.1	protein|retrotransposon protein, putative, Ty1-copia subclass, expressed	NA	NA	NA	NA	NA
pt2_02060	B	B1S	Potri.001G197500	Potri.001G197500(BS)	POPTR_0001s20440	sp|Q9LNQ4|ALA4_ARATH	Putative phospholipid-transporting ATPase 4 OS=Arabidopsis thaliana GN=ALA4 PE=1 SV=2	AT1G17500.1	| Symbols: | ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein | chr1:6018757-6023201 FORWARD LENGTH=1216	LOC_Os06g36990.1	protein|phospholipid-transporting ATPase 4, putative, expressed	IMGA|Medtr5g037210.1	Phospholipid-translocating P-type ATPase flippase family protein chr5 15827138-15809797 E EGN_Mt100125 20111014	GO:0006812|cation transport GO:0006888|ER to Golgi vesicle-mediated transport GO:0008152|metabolic process GO:0009744|response to sucrose stimulus GO:0009749|response to glucose stimulus GO:0009750|response to fructose stimulus GO:0015914|phospholipid transport GO:0043090|amino acid import	GO:0000166|nucleotide binding GO:0000287|magnesium ion binding GO:0003824|catalytic activity GO:0004012|phospholipid-translocating ATPase activity GO:0005524|ATP binding GO:0015662|ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism GO:0016820|hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances GO:0046872|metal ion binding	GO:0005886|plasma membrane
pt2_02061	A	A1S	Potri.001G197600	Potri.001G197600(AS)	POPTR_0001s20450	sp|P42158|KC1D_ARATH	Casein kinase I isoform delta-like OS=Arabidopsis thaliana GN=At4g26100 PE=2 SV=2	AT1G72710.1	| Symbols: CKL2 | casein kinase 1-like protein 2 | chr1:27372553-27376178 FORWARD LENGTH=465	LOC_Os01g51200.1	protein|CK1_CaseinKinase_1.3 - CK1 includes the casein kinase 1 kinases, expressed	IMGA|Medtr1g042430.1	Casein kinase chr1 12130628-12134366 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006487|protein N-linked glycosylation GO:0044036|cell wall macromolecule metabolic process	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005886|plasma membrane
pt2_02062	A	A2S	Potri.001G197700	Potri.001G197700(AS) Potri.003G043600(DS)	POPTR_0001s20460	NA	NA	AT5G11970.1	| Symbols: | Protein of unknown function (DUF3511) | chr5:3863289-3863606 REVERSE LENGTH=105	LOC_Os01g38660.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02063	G	G1	NA	NA	POPTR_0001s20470	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02064	A	A2S	Potri.001G197900	Potri.001G197900(AS) Potri.003G043700(DS)	POPTR_0001s20480	sp|P41381|IF4A8_TOBAC	Eukaryotic initiation factor 4A-8 OS=Nicotiana tabacum PE=2 SV=1	AT3G13920.1	| Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation initiation factor 4A1 | chr3:4592635-4594128 REVERSE LENGTH=412	LOC_Os06g48750.2	protein|DEAD-box ATP-dependent RNA helicase, putative, expressed	IMGA|Medtr1g012420.1	DEAD-box ATP-dependent RNA helicase chr1 2906253-2898397 F EGN_Mt100125 20111014	GO:0006094|gluconeogenesis GO:0006096|glycolysis GO:0006413|translational initiation GO:0009651|response to salt stress GO:0046686|response to cadmium ion	GO:0003676|nucleic acid binding GO:0003743|translation initiation factor activity GO:0004386|helicase activity GO:0005515|protein binding GO:0005524|ATP binding GO:0008026|ATP-dependent helicase activity	GO:0005618|cell wall GO:0005634|nucleus GO:0005730|nucleolus GO:0005737|cytoplasm GO:0005829|cytosol GO:0009506|plasmodesma GO:0016020|membrane GO:0048046|apoplast
pt2_02065	G	G1	NA	NA	POPTR_0001s20490	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02066	A	A1S	Potri.001G198000	Potri.001G198000(AS)	POPTR_0001s20510	sp|Q5M729|OPD23_ARATH	Dihydrolipoyllysine-residue acetyltransferase component 3 of pyruvate dehydrogenase complex, mitochondrial OS=Arabidopsis thaliana GN=At1g54220 PE=1 SV=1	AT1G54220.2	| Symbols: | Dihydrolipoamide acetyltransferase, long form protein | chr1:20246460-20250208 REVERSE LENGTH=539	LOC_Os06g01630.6	protein|2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed	IMGA|Medtr5g093300.1	Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex chr5 39691667-39698807 F EGN_Mt100125 20111014	GO:0006086|acetyl-CoA biosynthetic process from pyruvate GO:0006090|pyruvate metabolic process GO:0008152|metabolic process GO:0046686|response to cadmium ion	GO:0004742|dihydrolipoyllysine-residue acetyltransferase activity GO:0016746|transferase activity, transferring acyl groups	GO:0005739|mitochondrion GO:0045254|pyruvate dehydrogenase complex
pt2_02067	A	A1S	Potri.001G198100	Potri.001G198100(AS)	POPTR_0001s20520	NA	NA	AT1G17530.1	| Symbols: ATTIM23-1, TIM23-1 | translocase of inner mitochondrial membrane 23 | chr1:6027723-6028286 FORWARD LENGTH=187	LOC_Os03g02390.1	protein|mitochondrial import inner membrane translocase subunit Tim17, putative, expressed	IMGA|Medtr1g081230.1	Mitochondrial import inner membrane translocase subunit tim23 chr1 20688360-20688917 H EGN_Mt100125 20111014	GO:0006626|protein targeting to mitochondrion GO:0006869|lipid transport GO:0006886|intracellular protein transport GO:0006891|intra-Golgi vesicle-mediated transport GO:0010351|lithium ion transport GO:0015031|protein transport GO:0016558|protein import into peroxisome matrix	GO:0015450|P-P-bond-hydrolysis-driven protein transmembrane transporter activity	GO:0005622|intracellular GO:0005743|mitochondrial inner membrane GO:0005744|mitochondrial inner membrane presequence translocase complex
pt2_02068	G	G1	NA	NA	POPTR_0001s20525	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02069	C	C1S	Potri.001G198200	Potri.001G198200(CS)	NA	NA	NA	NA	LOC_Os11g20480.1	protein|expressed protein	NA	NA	NA	NA	NA
pt2_02070	G	G1	NA	NA	POPTR_0001s20540	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02071	C	C1S	Potri.001G198300	Potri.001G198300(CS)	sp|Q8S8S7|PUB34_ARATH	U-box domain-containing protein 34 OS=Arabidopsis thaliana GN=PUB34 PE=2 SV=1	AT5G12000.1	| Symbols: | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain | chr5:3874151-3876780 REVERSE LENGTH=701	LOC_Os01g39970.1	protein|protein kinase domain containing protein, putative, expressed	IMGA|Medtr1g009310.1	U-box domain-containing protein chr1 1884968-1891327 H EGN_Mt100125 20111014	GO:0002238|response to molecule of fungal origin GO:0006468|protein phosphorylation GO:0006950|response to stress GO:0010093|specification of floral organ identity GO:0048440|carpel development	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus
pt2_02072	A	A1S	Potri.001G198400	Potri.001G198400(AS)	POPTR_0001s20565	sp|Q9CAJ0|P2C16_ARATH	Protein phosphatase 2C 16 OS=Arabidopsis thaliana GN=HAB1 PE=1 SV=1	AT1G72770.3	| Symbols: HAB1 | homology to ABI1 | chr1:27390998-27392851 FORWARD LENGTH=511	LOC_Os01g40094.1	protein|protein phosphatase 2C, putative, expressed	NA	NA	GO:0006470|protein dephosphorylation GO:0009610|response to symbiotic fungus GO:0010029|regulation of seed germination	GO:0004722|protein serine/threonine phosphatase activity GO:0005515|protein binding	GO:0008287|protein serine/threonine phosphatase complex
pt2_02073	A	A1S	Potri.001G198500	Potri.001G198500(AS)	POPTR_0001s20570	sp|Q9LNP9|P2C07_ARATH	Protein phosphatase 2C 7 OS=Arabidopsis thaliana GN=HAB2 PE=2 SV=2	AT1G17550.1	| Symbols: HAB2 | homology to ABI2 | chr1:6034917-6036939 FORWARD LENGTH=511	LOC_Os01g40094.1	protein|protein phosphatase 2C, putative, expressed	IMGA|contig_240289_1.1	Protein phosphatase 2C contig_240289 189-2272 E PREDN 20111014	GO:0006470|protein dephosphorylation GO:0009610|response to symbiotic fungus	GO:0003824|catalytic activity GO:0004722|protein serine/threonine phosphatase activity	GO:0008287|protein serine/threonine phosphatase complex
pt2_02074	A	A1S	Potri.001G198600	Potri.001G198600(AS)	POPTR_0001s20580	sp|O14086|RPA49_SCHPO	DNA-directed RNA polymerase I subunit rpa49 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rpa49 PE=2 SV=1	AT3G13940.1	| Symbols: | DNA binding;DNA-directed RNA polymerases | chr3:4600647-4602412 REVERSE LENGTH=442	LOC_Os11g40090.2	protein|A49-like RNA polymerase I associated factor family protein, expressed	NA	NA	GO:0006351|transcription, DNA-dependent	GO:0003677|DNA binding GO:0003899|DNA-directed RNA polymerase activity	GO:0005634|nucleus
pt2_02075	A	A1S	Potri.001G198700	Potri.001G198700(AS)	POPTR_0001s20590	NA	NA	AT4G26060.1	| Symbols: | Ribosomal protein L18ae family | chr4:13214972-13215955 REVERSE LENGTH=133	LOC_Os01g08814.1	protein|expressed protein	NA	NA	GO:0006412|translation GO:0008150|biological_process GO:0019835|cytolysis GO:0050829|defense response to Gram-negative bacterium	GO:0003674|molecular_function GO:0003735|structural constituent of ribosome	GO:0005575|cellular_component GO:0005739|mitochondrion GO:0005840|ribosome GO:0016021|integral to membrane
pt2_02076	A	A2S	Potri.001G198700	Potri.001G198700(AS) Potri.003G044400(DS)	POPTR_0001s20590	NA	NA	AT4G26060.1	| Symbols: | Ribosomal protein L18ae family | chr4:13214972-13215955 REVERSE LENGTH=133	LOC_Os01g08814.1	protein|expressed protein	NA	NA	GO:0006412|translation GO:0008150|biological_process GO:0019835|cytolysis GO:0050829|defense response to Gram-negative bacterium	GO:0003674|molecular_function GO:0003735|structural constituent of ribosome	GO:0005575|cellular_component GO:0005739|mitochondrion GO:0005840|ribosome GO:0016021|integral to membrane
pt2_02077	A	A1S	Potri.001G198800	Potri.001G198800(AS)	POPTR_0001s20600	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02078	A	A1S	Potri.001G198900	Potri.001G198900(AS)	POPTR_0001s20610	NA	NA	AT1G72790.1	| Symbols: | hydroxyproline-rich glycoprotein family protein | chr1:27394848-27396533 FORWARD LENGTH=561	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005829|cytosol GO:0005886|plasma membrane
pt2_02079	A	A1S	Potri.001G199000	Potri.001G199000(AS)	POPTR_0001s20620	NA	NA	AT4G33090.1	| Symbols: APM1, ATAPM1 | aminopeptidase M1 | chr4:15965915-15970418 REVERSE LENGTH=879	LOC_Os02g12650.1	protein|puromycin-sensitive aminopeptidase, putative, expressed	NA	NA	GO:0006094|gluconeogenesis GO:0006508|proteolysis GO:0007010|cytoskeleton organization GO:0009926|auxin polar transport GO:0010359|regulation of anion channel activity GO:0010498|proteasomal protein catabolic process	GO:0004177|aminopeptidase activity GO:0008237|metallopeptidase activity GO:0008270|zinc ion binding	GO:0005634|nucleus GO:0005829|cytosol GO:0005886|plasma membrane
pt2_02080	A	A2S	Potri.001G199100	Potri.001G199100(AS) Potri.003G033200(AS)	POPTR_0001s20630	sp|Q9MT28|THRC_SOLTU	Threonine synthase, chloroplastic OS=Solanum tuberosum PE=2 SV=1	AT1G72810.1	| Symbols: | Pyridoxal-5'-phosphate-dependent enzyme family protein | chr1:27398760-27400393 REVERSE LENGTH=516	LOC_Os05g47640.1	protein|threonine synthase, chloroplast precursor, putative, expressed	NA	NA	GO:0006520|cellular amino acid metabolic process GO:0008152|metabolic process GO:0009088|threonine biosynthetic process	GO:0003824|catalytic activity GO:0004795|threonine synthase activity GO:0030170|pyridoxal phosphate binding	GO:0009507|chloroplast
pt2_02081	A	A1S	Potri.001G199200	Potri.001G199200(AS)	POPTR_0001s20640	sp|P54697|MYOJ_DICDI	Myosin-J heavy chain OS=Dictyostelium discoideum GN=myoJ PE=4 SV=2	AT5G20490.1	| Symbols: XIK, ATXIK, XI-17 | Myosin family protein with Dil domain | chr5:6927064-6936825 REVERSE LENGTH=1545	LOC_Os03g48140.1	protein|myosin, putative, expressed	IMGA|contig_50747_1.1	Myosin XI contig_50747 226-12071 H PREDN 20111014	GO:0009791|post-embryonic development GO:0010090|trichome morphogenesis GO:0010091|trichome branching GO:0010154|fruit development GO:0016049|cell growth GO:0048467|gynoecium development GO:0048768|root hair cell tip growth GO:0051645|Golgi localization GO:0051646|mitochondrion localization GO:0060151|peroxisome localization GO:0090436|leaf pavement cell development	GO:0003774|motor activity GO:0005524|ATP binding	GO:0009506|plasmodesma GO:0016459|myosin complex
pt2_02082	A	A1S	Potri.001G199300	Potri.001G199300(AS)	POPTR_0001s20650	sp|Q94AJ5|PGLR5_ARATH	Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana GN=At1g80170 PE=1 SV=1	AT1G80140.1	| Symbols: | Pectin lyase-like superfamily protein | chr1:30146611-30148180 FORWARD LENGTH=336	LOC_Os05g46520.1	protein|polygalacturonase, putative, expressed	IMGA|Medtr5g043350.1	Polygalacturonase chr5 18643080-18640606 H EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0004650|polygalacturonase activity	GO:0005576|extracellular region
pt2_02083	A	A2S	Potri.001G199500	Potri.001G199500(AS) Potri.001G193700(DS)	POPTR_0001s20660	sp|Q9CQK7|RWDD1_MOUSE	RWD domain-containing protein 1 OS=Mus musculus GN=Rwdd1 PE=1 SV=1	AT1G51730.1	| Symbols: | Ubiquitin-conjugating enzyme family protein | chr1:19186812-19188638 REVERSE LENGTH=252	LOC_Os01g37770.1	protein|RWD domain containing protein, expressed	IMGA|contig_84992_1.1	RWD domain-containing protein contig_84992 235-725 E PREDN 20111014	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_02084	A	A2S	Potri.001G199600	Potri.001G199600(AS) Potri.001G193600(BS)	POPTR_0001s20670	sp|P28724|DHE4_GIAIN	NADP-specific glutamate dehydrogenase OS=Giardia intestinalis PE=2 SV=1	AT1G51720.1	| Symbols: | Amino acid dehydrogenase family protein | chr1:19181741-19186297 FORWARD LENGTH=637	LOC_Os01g37760.1	protein|glutamate dehydrogenase protein, putative, expressed	IMGA|Medtr5g013470.1	Glutamate dehydrogenase chr5 4018429-4014787 E EGN_Mt100125 20111014	GO:0006520|cellular amino acid metabolic process GO:0008295|spermidine biosynthetic process GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0016491|oxidoreductase activity	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_02085	A	A1S	Potri.001G199700	Potri.001G199700(AS)	POPTR_0001s20680	sp|P93422|SYH_ORYSJ	Histidine--tRNA ligase OS=Oryza sativa subsp. japonica GN=Os05g0150900 PE=2 SV=2	AT3G02760.1	| Symbols: | Class II aaRS and biotin synthetases superfamily protein | chr3:597588-600650 REVERSE LENGTH=883	LOC_Os05g05840.1	protein|tRNA synthetase class II core domain containing protein, expressed	NA	NA	GO:0006418|tRNA aminoacylation for protein translation GO:0006427|histidyl-tRNA aminoacylation GO:0048481|ovule development	GO:0000166|nucleotide binding GO:0004812|aminoacyl-tRNA ligase activity GO:0004821|histidine-tRNA ligase activity GO:0005524|ATP binding	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_02086	A	A1S	Potri.001G199800	Potri.001G199800(AS)	POPTR_0001s20700	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02087	A	A1S	Potri.001G200000	Potri.001G200000(AS)	POPTR_0001s20710	sp|P0DH62|Y4407_SELML	Inactive protein kinase SELMODRAFT_444075 OS=Selaginella moellendorffii GN=SELMODRAFT_444075 PE=2 SV=1	AT3G13690.1	| Symbols: | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain | chr3:4486920-4490011 FORWARD LENGTH=753	LOC_Os01g41870.2	protein|protein kinase, putative, expressed	IMGA|Medtr5g034210.1	Receptor-like-kinase chr5 14377604-14370310 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0046777|protein autophosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005575|cellular_component GO:0005886|plasma membrane
pt2_02088	A	A1S	Potri.001G200100	Potri.001G200100(AS)	POPTR_0001s20720	sp|Q94IA6|C90D1_ARATH	3-epi-6-deoxocathasterone 23-monooxygenase OS=Arabidopsis thaliana GN=CYP90D1 PE=2 SV=1	AT3G13730.1	| Symbols: CYP90D1 | cytochrome P450, family 90, subfamily D, polypeptide 1 | chr3:4498330-4500836 REVERSE LENGTH=491	LOC_Os01g10040.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g021220.1	Cytochrome P450 90C1 chr5 7906123-7900243 H EGN_Mt100125 20111014	GO:0016132|brassinosteroid biosynthetic process GO:0048366|leaf development GO:0048441|petal development GO:0048443|stamen development GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0016709|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0009507|chloroplast
pt2_02089	A	A1S	Potri.001G200200	Potri.001G200200(AS)	POPTR_0001s20740	NA	NA	AT1G55160.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G19530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr1:20578804-20579803 FORWARD LENGTH=137	LOC_Os05g51540.1	protein|expressed protein	IMGA|contig_61111_1.1	Unknown protein contig_61111 4503-1053 E PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009536|plastid
pt2_02090	A	A1S	Potri.001G200200	Potri.001G200200(AS)	POPTR_0001s20740	NA	NA	AT1G55160.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G19530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr1:20578804-20579803 FORWARD LENGTH=137	LOC_Os05g51540.1	protein|expressed protein	IMGA|contig_61111_1.1	Unknown protein contig_61111 4503-1053 E PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009536|plastid
pt2_02091	A	A2S	Potri.001G200300	Potri.001G200300(AS) Potri.003G038400(DS)	POPTR_0001s20750	sp|P74327|MRNC_SYNY3	Mini-ribonuclease 3 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=mrnC PE=3 SV=1	AT1G55140.1	| Symbols: | Ribonuclease III family protein | chr1:20572503-20574332 REVERSE LENGTH=237	LOC_Os11g13420.3	protein|RNA binding protein, putative, expressed	NA	NA	GO:0006396|RNA processing	GO:0003723|RNA binding GO:0004525|ribonuclease III activity	GO:0009507|chloroplast
pt2_02092	A	A1S	Potri.001G200400	Potri.001G200400(AS)	POPTR_0001s20760	sp|Q9SCW1|BGAL1_ARATH	Beta-galactosidase 1 OS=Arabidopsis thaliana GN=BGAL1 PE=1 SV=1	AT3G13750.1	| Symbols: BGAL1 | beta galactosidase 1 | chr3:4511192-4515756 FORWARD LENGTH=847	LOC_Os01g39830.1	protein|beta-galactosidase, putative, expressed	IMGA|Medtr5g021190.1	Beta-galactosidase chr5 7885693-7880571 E EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0032880|regulation of protein localization GO:0042744|hydrogen peroxide catabolic process GO:0048767|root hair elongation	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0004565|beta-galactosidase activity GO:0030246|carbohydrate binding GO:0043169|cation binding	GO:0005576|extracellular region GO:0005618|cell wall GO:0009505|plant-type cell wall GO:0009506|plasmodesma
pt2_02093	A	A1S	Potri.001G200500	Potri.001G200500(AS)	POPTR_0001s20770	sp|Q0WV90|TPR1_ARATH	Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 PE=1 SV=3	AT1G80490.2	| Symbols: TPR1 | TOPLESS-related 1 | chr1:30261094-30266446 REVERSE LENGTH=1120	LOC_Os03g14980.1	protein|lissencephaly type-1-like homology motif, putative, expressed	IMGA|Medtr1g019470.1	WD repeat-containing protein-like protein chr1 6035857-6034563 H EGN_Mt100125 20111014	GO:0009733|response to auxin stimulus GO:0009867|jasmonic acid mediated signaling pathway GO:0010051|xylem and phloem pattern formation GO:0010072|primary shoot apical meristem specification GO:0045892|negative regulation of transcription, DNA-dependent	GO:0005515|protein binding GO:0042803|protein homodimerization activity	GO:0005634|nucleus GO:0005829|cytosol
pt2_02094	G	G1	NA	NA	POPTR_0001s20780	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02095	A	A1S	Potri.001G200700	Potri.001G200700(AS)	POPTR_0001s20790	NA	NA	AT1G17620.1	| Symbols: | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | chr1:6062313-6063107 FORWARD LENGTH=264	LOC_Os05g11010.1	protein|harpin-induced protein 1 domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_02096	A	A2S	Potri.001G200800	Potri.001G200800(AS) Potri.003G039000(DS)	POPTR_0001s20800	sp|Q9S746|HTH_ARATH	Protein HOTHEAD OS=Arabidopsis thaliana GN=HTH PE=1 SV=1	AT1G72970.1	| Symbols: HTH, EDA17 | Glucose-methanol-choline (GMC) oxidoreductase family protein | chr1:27452872-27455706 FORWARD LENGTH=594	LOC_Os09g19930.1	protein|HOTHEAD precursor, putative, expressed	IMGA|Medtr5g011020.1	Choline dehydrogenase chr5 2846622-2851422 H EGN_Mt100125 20111014	GO:0006066|alcohol metabolic process GO:0007267|cell-cell signaling GO:0009553|embryo sac development GO:0010430|fatty acid omega-oxidation GO:0055114|oxidation-reduction process	GO:0008812|choline dehydrogenase activity GO:0016614|oxidoreductase activity, acting on CH-OH group of donors GO:0016832|aldehyde-lyase activity GO:0046593|mandelonitrile lyase activity GO:0050660|flavin adenine dinucleotide binding	GO:0005576|extracellular region
pt2_02097	C	C2S	Potri.001G200900	Potri.001G200900(CS) Potri.016G105200(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02098	A	A1S	Potri.001G201000	Potri.001G201000(AS)	POPTR_0001s20820	sp|Q9SSN0|RD3H1_ARATH	Protein ROOT HAIR DEFECTIVE 3 homolog 1 OS=Arabidopsis thaliana GN=At1g72960 PE=2 SV=2	AT1G72960.1	| Symbols: | Root hair defective 3 GTP-binding protein (RHD3) | chr1:27446263-27450862 FORWARD LENGTH=795	LOC_Os01g39310.1	protein|SEY1, putative, expressed	NA	NA	NA	GO:0000166|nucleotide binding GO:0016817|hydrolase activity, acting on acid anhydrides	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02099	A	A1S	Potri.001G201100	Potri.001G201100(AS)	POPTR_0001s20830	sp|Q9LMR3|TYRA2_ARATH	Arogenate dehydrogenase 2, chloroplastic OS=Arabidopsis thaliana GN=TYRAAT2 PE=1 SV=1	AT1G15710.1	| Symbols: | prephenate dehydrogenase family protein | chr1:5404505-5405581 FORWARD LENGTH=358	LOC_Os06g49505.1	protein|arogenate dehydrogenase 1, chloroplast precursor, putative, expressed	IMGA|Medtr5g083530.2	Arogenate dehydrogenase chr5 35043508-35041723 E EGN_Mt100125 20111014	GO:0006567|threonine catabolic process GO:0006571|tyrosine biosynthetic process GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0004665|prephenate dehydrogenase (NADP+) activity GO:0008977|prephenate dehydrogenase activity	GO:0009507|chloroplast
pt2_02100	A	A1S	Potri.001G201200	Potri.001G201200(AS)	POPTR_0001s20840	NA	NA	NA	NA	LOC_Os04g27520.1	protein|retrotransposon protein, putative, unclassified, expressed	NA	NA	NA	NA	NA
pt2_02101	A	A1S	Potri.001G201300	Potri.001G201300(AS)	POPTR_0001s20850	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02102	C	C1S	Potri.001G201400	Potri.001G201400(CS)	sp|Q8IUF1|CBWD2_HUMAN	COBW domain-containing protein 2 OS=Homo sapiens GN=CBWD2 PE=1 SV=1	AT1G80480.1	| Symbols: PTAC17 | plastid transcriptionally active 17 | chr1:30258272-30260570 REVERSE LENGTH=444	LOC_Os02g55630.1	protein|COBW domain containing protein, putative, expressed	IMGA|Medtr5g044050.1	COBW domain-containing protein chr5 18952585-18958233 E EGN_Mt100125 20111014	NA	NA	GO:0009295|nucleoid GO:0009507|chloroplast GO:0009508|plastid chromosome GO:0009570|chloroplast stroma
pt2_02103	A	A1S	Potri.001G201500	Potri.001G201500(AS)	POPTR_0001s20870	NA	NA	AT1G52510.1	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr1:19563039-19565260 REVERSE LENGTH=380	LOC_Os04g55180.2	protein|hydrolase, alpha/beta fold family domain containing protein, expressed	IMGA|contig_15278_1.1	Alpha/beta hydrolase fold protein contig_15278 89-1305 E PREDN 20111014	GO:0016556|mRNA modification	GO:0003824|catalytic activity GO:0016787|hydrolase activity	GO:0005737|cytoplasm GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope
pt2_02104	A	A1S	Potri.001G201600	Potri.001G201600(AS)	POPTR_0001s20880	sp|Q9SSQ4|FRS6_ARATH	Protein FAR1-RELATED SEQUENCE 6 OS=Arabidopsis thaliana GN=FRS6 PE=2 SV=1	AT1G52520.1	| Symbols: FRS6 | FAR1-related sequence 6 | chr1:19565933-19568248 FORWARD LENGTH=703	LOC_Os02g39540.1	protein|transposon protein, putative, unclassified, expressed	IMGA|Medtr5g099300.1	FAR1-related protein chr5 42508792-42503261 E EGN_Mt100125 20111014	GO:0009639|response to red or far red light	GO:0008270|zinc ion binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02105	A	A1S	Potri.001G201700	Potri.001G201700(AS)	POPTR_0001s20890	NA	NA	AT1G52530.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Hus1-like protein (InterPro:IPR007150); Has 129 Blast hits to 128 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 57; Fungi - 10; Plants - 47; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). | chr1:19569045-19570004 FORWARD LENGTH=319	LOC_Os04g44620.2	protein|hus1-like protein, expressed	IMGA|Medtr1g082730.1	Hus1 protein chr1 21333646-21336237 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_02106	A	A1S	Potri.001G201800	Potri.001G201800(AS)	POPTR_0001s20900	sp|P08770|TRA1_MAIZE	Putative AC transposase OS=Zea mays PE=2 SV=2	AT3G42170.1	| Symbols: | BED zinc finger ;hAT family dimerisation domain | chr3:14321838-14323928 FORWARD LENGTH=696	LOC_Os03g52310.1	protein|transposon protein, putative, unclassified, expressed	IMGA|Medtr5g088330.1	Oligoribonuclease chr5 37283827-37298839 E EGN_Mt100125 20111014	GO:0009791|post-embryonic development	GO:0003677|DNA binding GO:0046983|protein dimerization activity	GO:0005634|nucleus GO:0005829|cytosol
pt2_02107	A	A1S	Potri.001G201800	Potri.001G201800(AS)	POPTR_0001s20900	sp|P08770|TRA1_MAIZE	Putative AC transposase OS=Zea mays PE=2 SV=2	AT3G42170.1	| Symbols: | BED zinc finger ;hAT family dimerisation domain | chr3:14321838-14323928 FORWARD LENGTH=696	LOC_Os03g52310.1	protein|transposon protein, putative, unclassified, expressed	IMGA|Medtr5g088330.1	Oligoribonuclease chr5 37283827-37298839 E EGN_Mt100125 20111014	GO:0009791|post-embryonic development	GO:0003677|DNA binding GO:0046983|protein dimerization activity	GO:0005634|nucleus GO:0005829|cytosol
pt2_02108	A	A1S	Potri.001G201900	Potri.001G201900(AS)	POPTR_0001s20920	NA	NA	AT3G15920.1	| Symbols: | Phox (PX) domain-containing protein | chr3:5383768-5386955 REVERSE LENGTH=755	LOC_Os06g43560.1	protein|phox domain-containing protein, putative, expressed	NA	NA	GO:0007165|signal transduction GO:0035556|intracellular signal transduction	GO:0035091|phosphatidylinositol binding	GO:0005634|nucleus
pt2_02109	A	A1S	Potri.001G202000	Potri.001G202000(AS)	POPTR_0001s20930	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_02110	C	C1S	Potri.001G202100	Potri.001G202100(CS)	sp|Q9SSD1|TMM_ARATH	Protein TOO MANY MOUTHS OS=Arabidopsis thaliana GN=TMM PE=2 SV=1	AT1G80080.1	| Symbols: TMM, AtRLP17 | Leucine-rich repeat (LRR) family protein | chr1:30128073-30129563 REVERSE LENGTH=496	LOC_Os01g43440.1	protein|TOO MANY MOUTHS precursor, putative, expressed	IMGA|Medtr5g045910.1	Receptor-like protein kinase chr5 19714325-19723568 E EGN_Mt100125 20111014	GO:0002237|response to molecule of bacterial origin GO:0007165|signal transduction GO:0009737|response to abscisic acid stimulus GO:0010103|stomatal complex morphogenesis GO:0042127|regulation of cell proliferation GO:0048443|stamen development	GO:0004872|receptor activity GO:0005515|protein binding	GO:0005739|mitochondrion GO:0031225|anchored to membrane
pt2_02111	A	A1S	Potri.001G202200	Potri.001G202200(AS)	POPTR_0001s20950	NA	NA	AT1G80030.2	| Symbols: | Molecular chaperone Hsp40/DnaJ family protein | chr1:30105398-30108873 REVERSE LENGTH=500	NA	NA	NA	NA	GO:0006457|protein folding GO:0009408|response to heat GO:0010027|thylakoid membrane organization GO:0016117|carotenoid biosynthetic process	GO:0005524|ATP binding GO:0031072|heat shock protein binding GO:0051082|unfolded protein binding	GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009941|chloroplast envelope
pt2_02112	A	A1S	Potri.001G202300	Potri.001G202300(AS)	POPTR_0001s20960	NA	NA	AT1G15320.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr1:5272468-5274029 REVERSE LENGTH=289	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_02113	C	C1S	Potri.001G202400	Potri.001G202400(CS)	sp|Q6P2Q9|PRP8_HUMAN	Pre-mRNA-processing-splicing factor 8 OS=Homo sapiens GN=PRPF8 PE=1 SV=2	AT1G80070.1	| Symbols: SUS2, EMB33, EMB177, EMB14 | Pre-mRNA-processing-splicing factor | chr1:30118052-30127574 FORWARD LENGTH=2359	LOC_Os06g07080.1	protein|pre-mRNA-processing-splicing factor 8, putative, expressed	NA	NA	GO:0000226|microtubule cytoskeleton organization GO:0000398|mRNA splicing, via spliceosome GO:0006346|methylation-dependent chromatin silencing GO:0006499|N-terminal protein myristoylation GO:0007267|cell-cell signaling GO:0009616|virus induced gene silencing GO:0009630|gravitropism GO:0009855|determination of bilateral symmetry GO:0010014|meristem initiation GO:0010050|vegetative phase change GO:0010073|meristem maintenance GO:0010267|production of ta-siRNAs involved in RNA interference GO:0016246|RNA interference GO:0035196|production of miRNAs involved in gene silencing by miRNA	NA	GO:0005634|nucleus GO:0005681|spliceosomal complex GO:0009507|chloroplast GO:0016020|membrane
pt2_02114	A	A1S	Potri.001G202500	Potri.001G202500(AS)	POPTR_0001s20980	sp|Q9FF81|VPS36_ARATH	Vacuolar protein sorting-associated protein 36 OS=Arabidopsis thaliana GN=VPS36 PE=1 SV=1	AT5G04920.1	| Symbols: | EAP30/Vps36 family protein | chr5:1439172-1441545 REVERSE LENGTH=440	LOC_Os01g59800.2	protein|EAP30/Vps36 family domain containing protein, expressed	NA	NA	GO:0016192|vesicle-mediated transport	GO:0005215|transporter activity GO:0005515|protein binding	GO:0000814|ESCRT II complex GO:0009507|chloroplast
pt2_02115	R	R	NA	NA	POPTR_0001s20990	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02116	B	B5S	Potri.001G203400	Potri.001G203400(BS) Potri.001G203200(BS) Potri.001G203300(BS) Potri.001G203700(BS) Potri.008G028400(BS)	POPTR_0001s21000	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02117	A	A14S	Potri.001G202700	Potri.001G202700(AS) Potri.001G203900(AS) Potri.001G202800(AS) Potri.001G203700(AS) Potri.001G203800(AS) Potri.001G203400(BS) Potri.001G203500(BS) Potri.008G031000(BS) Potri.001G203300(BS) Potri.008G028400(BS) Potri.008G030800(DS) Potri.008G031400(DS) Potri.008G028200(DS) Potri.008G027800(DS)	POPTR_0001s21020	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02118	A	A14S	Potri.001G202700	Potri.001G202700(AS) Potri.001G203900(AS) Potri.001G202800(AS) Potri.001G203700(AS) Potri.001G203800(AS) Potri.001G203400(BS) Potri.001G203500(BS) Potri.001G203300(BS) Potri.008G028400(BS) Potri.008G030800(DS) Potri.008G031400(DS) Potri.008G028200(DS) Potri.008G028100(DS) Potri.008G027800(DS)	POPTR_0001s21020	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02119	A	A1S	Potri.001G202900	Potri.001G202900(AS)	POPTR_0001s21030	sp|Q8T295|PRP8_DICDI	Pre-mRNA-processing-splicing factor 8 homolog OS=Dictyostelium discoideum GN=prpf8 PE=3 SV=1	AT1G80070.1	| Symbols: SUS2, EMB33, EMB177, EMB14 | Pre-mRNA-processing-splicing factor | chr1:30118052-30127574 FORWARD LENGTH=2359	LOC_Os06g07080.1	protein|pre-mRNA-processing-splicing factor 8, putative, expressed	IMGA|Medtr5g098100.1	Pre-mRNA-processing-splicing factor chr5 41909475-41911658 I EGN_Mt100125 20111014	GO:0000226|microtubule cytoskeleton organization GO:0000398|mRNA splicing, via spliceosome GO:0006346|methylation-dependent chromatin silencing GO:0006499|N-terminal protein myristoylation GO:0007267|cell-cell signaling GO:0009616|virus induced gene silencing GO:0009630|gravitropism GO:0009855|determination of bilateral symmetry GO:0010014|meristem initiation GO:0010050|vegetative phase change GO:0010073|meristem maintenance GO:0010267|production of ta-siRNAs involved in RNA interference GO:0016246|RNA interference GO:0035196|production of miRNAs involved in gene silencing by miRNA	NA	GO:0005634|nucleus GO:0005681|spliceosomal complex GO:0009507|chloroplast GO:0016020|membrane
pt2_02120	G	G9	NA	NA	POPTR_0001s21035	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02121	A	A3S	Potri.001G203100	Potri.001G203100(AS) Potri.001G203600(BS) Potri.001G204000(BS)	POPTR_0001s21040	sp|Q9LSC2|Y3589_ARATH	PTI1-like tyrosine-protein kinase At3g15890 OS=Arabidopsis thaliana GN=At3g15890 PE=1 SV=1	AT3G15890.1	| Symbols: | Protein kinase superfamily protein | chr3:5374389-5376114 FORWARD LENGTH=361	LOC_Os02g09359.1	protein|BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	IMGA|Medtr1g102190.1	Somatic embryogenesis receptor kinase chr1 30371852-30369131 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_02122	C	C2A	Potri.001G203100	Potri.001G203100(CA) Potri.001G203600(CA)	sp|Q9LSC2|Y3589_ARATH	PTI1-like tyrosine-protein kinase At3g15890 OS=Arabidopsis thaliana GN=At3g15890 PE=1 SV=1	AT3G15890.1	| Symbols: | Protein kinase superfamily protein | chr3:5374389-5376114 FORWARD LENGTH=361	LOC_Os02g09359.1	protein|BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	IMGA|Medtr1g102190.1	Somatic embryogenesis receptor kinase chr1 30371852-30369131 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_02123	G	G2	NA	NA	POPTR_0001s21065	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02124	A	A8S	Potri.001G203900	Potri.001G203900(AS) Potri.001G203700(AS) Potri.001G203800(AS) Potri.001G202700(BS) Potri.001G203400(BS) Potri.001G202800(BS) Potri.008G028400(BS) Potri.008G031400(DS)	POPTR_0001s21070	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02125	A	A1A	Potri.001G204000	Potri.001G204000(AA)	POPTR_0001s21080	sp|Q9LSC2|Y3589_ARATH	PTI1-like tyrosine-protein kinase At3g15890 OS=Arabidopsis thaliana GN=At3g15890 PE=1 SV=1	AT1G52540.1	| Symbols: | Protein kinase superfamily protein | chr1:19570298-19571884 REVERSE LENGTH=350	LOC_Os02g09359.1	protein|BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	IMGA|Medtr1g102190.1	Somatic embryogenesis receptor kinase chr1 30371852-30369131 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_02126	A	A1S	Potri.001G204000	Potri.001G204000(AS)	POPTR_0001s21090	sp|Q9LSC2|Y3589_ARATH	PTI1-like tyrosine-protein kinase At3g15890 OS=Arabidopsis thaliana GN=At3g15890 PE=1 SV=1	AT1G52540.1	| Symbols: | Protein kinase superfamily protein | chr1:19570298-19571884 REVERSE LENGTH=350	LOC_Os02g09359.1	protein|BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	IMGA|Medtr1g102190.1	Somatic embryogenesis receptor kinase chr1 30371852-30369131 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_02127	A	A1S	Potri.001G204000	Potri.001G204000(AS)	POPTR_0001s21100	sp|Q9LSC2|Y3589_ARATH	PTI1-like tyrosine-protein kinase At3g15890 OS=Arabidopsis thaliana GN=At3g15890 PE=1 SV=1	AT1G52540.1	| Symbols: | Protein kinase superfamily protein | chr1:19570298-19571884 REVERSE LENGTH=350	LOC_Os02g09359.1	protein|BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	IMGA|Medtr1g102190.1	Somatic embryogenesis receptor kinase chr1 30371852-30369131 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_02128	A	A1S	Potri.001G204100	Potri.001G204100(AS)	POPTR_0001s21110	NA	NA	AT3G15820.1	| Symbols: ROD1 | phosphatidic acid phosphatase-related / PAP2-related | chr3:5351217-5353573 FORWARD LENGTH=301	LOC_Os06g40500.1	protein|expressed protein	NA	NA	GO:0046470|phosphatidylcholine metabolic process	GO:0004142|diacylglycerol cholinephosphotransferase activity	NA
pt2_02129	G	G1	NA	NA	POPTR_0001s21115	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02130	A	A1S	Potri.001G204200	Potri.001G204200(AS)	POPTR_0001s21120	sp|Q9M7M1|ETR1_PRUPE	Ethylene receptor OS=Prunus persica GN=ETR1 PE=2 SV=1	AT1G66340.1	| Symbols: ETR1, EIN1, ETR, AtETR1 | Signal transduction histidine kinase, hybrid-type, ethylene sensor | chr1:24734698-24737366 FORWARD LENGTH=738	LOC_Os03g49500.1	protein|ethylene receptor, putative, expressed	IMGA|contig_103103_1.1	Ethylene receptor contig_103103 403-3225 E PREDN 20111014	GO:0002237|response to molecule of bacterial origin GO:0006952|defense response GO:0007623|circadian rhythm GO:0009408|response to heat GO:0009625|response to insect GO:0009651|response to salt stress GO:0009690|cytokinin metabolic process GO:0009723|response to ethylene stimulus GO:0009727|detection of ethylene stimulus GO:0009733|response to auxin stimulus GO:0009736|cytokinin mediated signaling pathway GO:0009737|response to abscisic acid stimulus GO:0009739|response to gibberellin stimulus GO:0009871|jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway GO:0010105|negative regulation of ethylene mediated signaling pathway GO:0010119|regulation of stomatal movement GO:0010182|sugar mediated signaling pathway GO:0042742|defense response to bacterium GO:0050665|hydrogen peroxide biosynthetic process GO:0052544|defense response by callose deposition in cell wall GO:0071281|cellular response to iron ion GO:1900140|regulation of seedling development	GO:0000155|two-component sensor activity GO:0000156|two-component response regulator activity GO:0004673|protein histidine kinase activity GO:0004871|signal transducer activity GO:0005515|protein binding GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0042802|identical protein binding GO:0051740|ethylene binding	GO:0005783|endoplasmic reticulum GO:0005789|endoplasmic reticulum membrane GO:0016020|membrane
pt2_02131	A	A1S	Potri.001G204300	Potri.001G204300(AS)	POPTR_0001s21140	NA	NA	AT3G15840.5	| Symbols: PIFI | post-illumination chlorophyll fluorescence increase | chr3:5356782-5358265 REVERSE LENGTH=248	LOC_Os03g38950.2	protein|chloroplast post-illumination chlorophyll fluorescence increase protein, putative, expressed	NA	NA	GO:0010478|chlororespiration	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009579|thylakoid
pt2_02132	A	A1S	Potri.001G204400	Potri.001G204400(AS)	POPTR_0001s21150	sp|Q5F468|S38A2_CHICK	Sodium-coupled neutral amino acid transporter 2 OS=Gallus gallus GN=SLC38A2 PE=2 SV=2	AT1G80510.1	| Symbols: | Transmembrane amino acid transporter family protein | chr1:30273100-30274569 FORWARD LENGTH=489	LOC_Os06g43700.1	protein|transmembrane amino acid transporter protein, putative, expressed	IMGA|Medtr5g083770.1	Sodium-coupled neutral amino acid transporter chr5 35126215-35128682 H EGN_Mt100125 20111014	GO:0006865|amino acid transport	GO:0015171|amino acid transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_02133	A	A1S	Potri.001G204600	Potri.001G204600(AS)	POPTR_0001s21160	NA	NA	AT1G15760.1	| Symbols: | Sterile alpha motif (SAM) domain-containing protein | chr1:5425714-5426322 FORWARD LENGTH=202	LOC_Os04g55120.1	protein|jp18, putative, expressed	IMGA|contig_63629_1.1	Jp18 contig_63629 750-1737 F PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_02134	A	A3S	Potri.001G204700	Potri.001G204700(AS) Potri.003G012200(DS) Potri.003G012100(DA)	POPTR_0001s21170	NA	NA	AT1G80530.1	| Symbols: | Major facilitator superfamily protein | chr1:30278224-30280247 REVERSE LENGTH=561	LOC_Os06g08110.1	protein|nodulin, putative, expressed	IMGA|Medtr5g090570.1	Nodulin-related protein chr5 38409849-38407023 H EGN_Mt100125 20111014	GO:0080167|response to karrikin	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_02135	A	A1S	Potri.001G204700	Potri.001G204700(AS)	POPTR_0001s21170	NA	NA	AT1G80530.1	| Symbols: | Major facilitator superfamily protein | chr1:30278224-30280247 REVERSE LENGTH=561	LOC_Os06g08110.1	protein|nodulin, putative, expressed	IMGA|Medtr5g090570.1	Nodulin-related protein chr5 38409849-38407023 H EGN_Mt100125 20111014	GO:0080167|response to karrikin	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_02136	A	A1S	Potri.001G204800	Potri.001G204800(AS)	POPTR_0001s21180	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02137	C	C1S	Potri.001G204700	Potri.001G204700(CS)	NA	NA	AT1G80530.1	| Symbols: | Major facilitator superfamily protein | chr1:30278224-30280247 REVERSE LENGTH=561	LOC_Os06g08110.1	protein|nodulin, putative, expressed	IMGA|Medtr5g090570.1	Nodulin-related protein chr5 38409849-38407023 H EGN_Mt100125 20111014	GO:0080167|response to karrikin	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_02138	A	A3S	Potri.001G204900	Potri.001G204900(AS) Potri.003G012400(DS) Potri.003G029600(DS)	POPTR_0001s21200	sp|F4I171|MD15A_ARATH	Mediator of RNA polymerase II transcription subunit 15a OS=Arabidopsis thaliana GN=MED15A PE=1 SV=1	AT1G15780.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI BLink). | chr1:5430446-5435921 REVERSE LENGTH=1335	LOC_Os08g45080.1	protein|expressed protein	NA	NA	GO:0001676|long-chain fatty acid metabolic process GO:0002213|defense response to insect GO:0006633|fatty acid biosynthetic process GO:0009751|response to salicylic acid stimulus	NA	GO:0005634|nucleus
pt2_02139	R	R	NA	NA	POPTR_0001s21210	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02140	A	A1S	Potri.001G205100	Potri.001G205100(AS)	POPTR_0001s21220	sp|P0C897|Y3264_ARATH	Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana GN=At3g02645 PE=3 SV=1	AT3G02645.1	| Symbols: | Plant protein of unknown function (DUF247) | chr3:566271-567860 FORWARD LENGTH=529	LOC_Os06g08120.1	protein|plant protein of unknown function domain containing protein, expressed	IMGA|Medtr5g087580.1	hypothetical protein chr5 36953659-36954327 H EGN_Mt100125 20111014	NA	NA	GO:0005886|plasma membrane
pt2_02141	A	A1S	Potri.001G205200	Potri.001G205200(AS)	POPTR_0001s21230	sp|Q9LU77|PIN2_ARATH	Auxin efflux carrier component 2 OS=Arabidopsis thaliana GN=PIN2 PE=1 SV=2	AT5G57090.1	| Symbols: EIR1, WAV6, ATPIN2, PIN2, AGR, AGR1 | Auxin efflux carrier family protein | chr5:23100765-23104456 FORWARD LENGTH=647	LOC_Os06g12610.1	protein|auxin efflux carrier component, putative, expressed	NA	NA	GO:0000271|polysaccharide biosynthetic process GO:0007389|pattern specification process GO:0008361|regulation of cell size GO:0009825|multidimensional cell growth GO:0009926|auxin polar transport GO:0009932|cell tip growth GO:0009942|longitudinal axis specification GO:0010015|root morphogenesis GO:0010583|response to cyclopentenone GO:0010817|regulation of hormone levels GO:0040007|growth GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0048364|root development GO:0048767|root hair elongation GO:0055085|transmembrane transport GO:0071555|cell wall organization	GO:0005215|transporter activity GO:0009672|auxin:hydrogen symporter activity GO:0010329|auxin efflux transmembrane transporter activity	GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane GO:0016021|integral to membrane
pt2_02142	A	A1S	Potri.001G205300	Potri.001G205300(AS)	POPTR_0001s21240	sp|F4KCL7|OE64M_ARATH	Outer envelope protein 64, mitochondrial OS=Arabidopsis thaliana GN=OM64 PE=1 SV=1	AT5G09420.1	| Symbols: ATTOC64-V, MTOM64, TOC64-V, OM64, AtmtOM64 | translocon at the outer membrane of chloroplasts 64-V | chr5:2928316-2931750 FORWARD LENGTH=603	LOC_Os02g51810.1	protein|expressed protein	IMGA|Medtr5g012030.1	Stress-induced-phosphoprotein chr5 3312809-3308439 F EGN_Mt100125 20111014	GO:0006612|protein targeting to membrane GO:0006626|protein targeting to mitochondrion GO:0006820|anion transport GO:0006862|nucleotide transport GO:0006888|ER to Golgi vesicle-mediated transport GO:0006944|cellular membrane fusion GO:0010363|regulation of plant-type hypersensitive response GO:0015696|ammonium transport GO:0015802|basic amino acid transport GO:0043069|negative regulation of programmed cell death GO:0043090|amino acid import GO:0043269|regulation of ion transport	GO:0004040|amidase activity GO:0016884|carbon-nitrogen ligase activity, with glutamine as amido-N-donor	GO:0005739|mitochondrion
pt2_02143	R	R	NA	NA	POPTR_0001s21260	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02144	A	A2S	Potri.001G205400	Potri.001G205400(AS) Potri.003G024000(BS)	POPTR_0001s21270	sp|Q9SZC9|HMA6_ARATH	Copper-transporting ATPase PAA1, chloroplastic OS=Arabidopsis thaliana GN=PAA1 PE=2 SV=1	AT4G33520.2	| Symbols: PAA1, HMA6 | P-type ATP-ase 1 | chr4:16118993-16125849 FORWARD LENGTH=949	LOC_Os08g37950.1	protein|copper-transporting ATPase PAA1, putative, expressed	IMGA|contig_52028_1.1	Copper transporting ATPase contig_52028 7242-460 E PREDN 20111014	GO:0006754|ATP biosynthetic process GO:0006812|cation transport GO:0008152|metabolic process GO:0009767|photosynthetic electron transport chain GO:0030001|metal ion transport GO:0035434|copper ion transmembrane transport GO:0046034|ATP metabolic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0005375|copper ion transmembrane transporter activity GO:0005524|ATP binding GO:0015662|ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism GO:0043682|copper-transporting ATPase activity GO:0046872|metal ion binding	GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009536|plastid GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope GO:0016020|membrane GO:0016021|integral to membrane
pt2_02145	B	B2S	Potri.003G024000	Potri.003G024000(BS) Potri.001G205400(BS)	POPTR_0001s21290	sp|Q9SZC9|HMA6_ARATH	Copper-transporting ATPase PAA1, chloroplastic OS=Arabidopsis thaliana GN=PAA1 PE=2 SV=1	AT4G33520.2	| Symbols: PAA1, HMA6 | P-type ATP-ase 1 | chr4:16118993-16125849 FORWARD LENGTH=949	LOC_Os08g37950.1	protein|copper-transporting ATPase PAA1, putative, expressed	IMGA|contig_52028_1.1	Copper transporting ATPase contig_52028 7242-460 E PREDN 20111014	GO:0006754|ATP biosynthetic process GO:0006812|cation transport GO:0008152|metabolic process GO:0009767|photosynthetic electron transport chain GO:0030001|metal ion transport GO:0035434|copper ion transmembrane transport GO:0046034|ATP metabolic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0005375|copper ion transmembrane transporter activity GO:0005524|ATP binding GO:0015662|ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism GO:0043682|copper-transporting ATPase activity GO:0046872|metal ion binding	GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009536|plastid GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope GO:0016020|membrane GO:0016021|integral to membrane
pt2_02146	R	R	NA	NA	POPTR_0001s21300	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02147	A	A1S	Potri.001G205500	Potri.001G205500(AS)	POPTR_0001s21310	sp|Q9FY75|POT7_ARATH	Potassium transporter 7 OS=Arabidopsis thaliana GN=POT7 PE=1 SV=2	AT5G09400.1	| Symbols: KUP7 | K+ uptake permease 7 | chr5:2916377-2920604 FORWARD LENGTH=858	LOC_Os07g32530.1	protein|potassium transporter, putative, expressed	IMGA|Medtr5g070670.1	Potassium transporter chr5 28933662-28942483 E EGN_Mt100125 20111014	GO:0006813|potassium ion transport GO:0071805|potassium ion transmembrane transport	GO:0015079|potassium ion transmembrane transporter activity	GO:0000325|plant-type vacuole GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005886|plasma membrane GO:0016020|membrane
pt2_02148	D	D1S	Potri.001G205600	Potri.001G205600(DS)	POPTR_0001s21320	NA	NA	AT1G43722.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). | chr1:16496403-16497377 FORWARD LENGTH=324	ChrUn.fgenesh.mRNA.24	protein|hypothetical protein	IMGA|Medtr1g059320.1	hypothetical protein chr1 15361664-15360985 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02149	A	A1S	Potri.001G205700	Potri.001G205700(AS)	POPTR_0001s21330	NA	NA	AT5G09390.1	| Symbols: | CD2-binding protein-related | chr5:2913591-2915803 FORWARD LENGTH=351	LOC_Os09g20590.1	protein|CD2-binding protein-related, putative, expressed	IMGA|Medtr5g017190.1	CD2 antigen cytoplasmic tail-binding protein chr5 5989892-5990735 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005737|cytoplasm
pt2_02150	C	C1S	Potri.001G205800	Potri.001G205800(CS)	NA	NA	AT5G64170.2	| Symbols: | dentin sialophosphoprotein-related | chr5:25672904-25675934 REVERSE LENGTH=616	LOC_Os03g27019.5	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02151	A	A1S	Potri.001G205800	Potri.001G205800(AS)	POPTR_0001s21350	NA	NA	AT5G64170.2	| Symbols: | dentin sialophosphoprotein-related | chr5:25672904-25675934 REVERSE LENGTH=616	LOC_Os03g27019.5	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02152	A	A1S	Potri.001G206000	Potri.001G206000(AS)	POPTR_0001s21360	NA	NA	AT5G64160.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:25670941-25672318 FORWARD LENGTH=227	LOC_Os02g51700.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_02153	A	A3S	Potri.001G206100	Potri.001G206100(AS) Potri.003G023500(DS) Potri.T125400(DS)	POPTR_0001s21370	sp|Q803I2|ERGI3_DANRE	Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Danio rerio GN=ergic3 PE=2 SV=1	AT1G36050.2	| Symbols: | Endoplasmic reticulum vesicle transporter protein | chr1:13450467-13453055 FORWARD LENGTH=386	LOC_Os04g38340.1	protein|endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed	IMGA|Medtr5g062720.1	Endoplasmic reticulum-Golgi intermediate compartment protein chr5 25295217-25286148 F EGN_Mt100125 20111014	GO:0006633|fatty acid biosynthetic process	GO:0003674|molecular_function	GO:0005774|vacuolar membrane GO:0005783|endoplasmic reticulum GO:0005794|Golgi apparatus
pt2_02154	C	C1S	Potri.001G206100	Potri.001G206100(CS)	sp|Q803I2|ERGI3_DANRE	Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Danio rerio GN=ergic3 PE=2 SV=1	AT1G36050.2	| Symbols: | Endoplasmic reticulum vesicle transporter protein | chr1:13450467-13453055 FORWARD LENGTH=386	LOC_Os04g38340.1	protein|endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed	IMGA|Medtr5g062720.1	Endoplasmic reticulum-Golgi intermediate compartment protein chr5 25295217-25286148 F EGN_Mt100125 20111014	GO:0006633|fatty acid biosynthetic process	GO:0003674|molecular_function	GO:0005774|vacuolar membrane GO:0005783|endoplasmic reticulum GO:0005794|Golgi apparatus
pt2_02155	A	A1S	Potri.001G206100	Potri.001G206100(AS)	POPTR_0001s21370	sp|Q803I2|ERGI3_DANRE	Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Danio rerio GN=ergic3 PE=2 SV=1	AT1G36050.2	| Symbols: | Endoplasmic reticulum vesicle transporter protein | chr1:13450467-13453055 FORWARD LENGTH=386	LOC_Os04g38340.1	protein|endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed	IMGA|Medtr5g062720.1	Endoplasmic reticulum-Golgi intermediate compartment protein chr5 25295217-25286148 F EGN_Mt100125 20111014	GO:0006633|fatty acid biosynthetic process	GO:0003674|molecular_function	GO:0005774|vacuolar membrane GO:0005783|endoplasmic reticulum GO:0005794|Golgi apparatus
pt2_02156	A	A1S	Potri.001G206200	Potri.001G206200(AS)	POPTR_0001s21380	sp|Q9FY79|LAC14_ARATH	Laccase-14 OS=Arabidopsis thaliana GN=LAC14 PE=2 SV=1	AT5G09360.1	| Symbols: LAC14 | laccase 14 | chr5:2906426-2908658 REVERSE LENGTH=569	LOC_Os01g61160.1	protein|laccase precursor protein, putative, expressed	IMGA|Medtr5g083360.1	Laccase chr5 34982493-34978821 E EGN_Mt100125 20111014	GO:0046274|lignin catabolic process GO:0055114|oxidation-reduction process	GO:0005507|copper ion binding GO:0016491|oxidoreductase activity GO:0052716|hydroquinone:oxygen oxidoreductase activity	GO:0005576|extracellular region GO:0048046|apoplast
pt2_02157	A	A2S	Potri.001G206300	Potri.001G206300(AS) Potri.008G132100(DS)	POPTR_0001s21390	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006486|protein glycosylation GO:0006499|N-terminal protein myristoylation GO:0006623|protein targeting to vacuole GO:0016192|vesicle-mediated transport GO:0048268|clathrin coat assembly	GO:0005543|phospholipid binding GO:0005545|1-phosphatidylinositol binding GO:0030276|clathrin binding	GO:0005886|plasma membrane GO:0016020|membrane
pt2_02158	A	A1S	Potri.001G206400	Potri.001G206400(AS)	POPTR_0001s21400	sp|P44176|TRPH_HAEIN	Protein trpH OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=trpH PE=3 SV=1	AT2G13840.1	| Symbols: | Polymerase/histidinol phosphatase-like | chr2:5788616-5791057 REVERSE LENGTH=434	LOC_Os03g09180.1	protein|trpH, putative, expressed	NA	NA	GO:0006260|DNA replication	GO:0003677|DNA binding GO:0003824|catalytic activity GO:0003887|DNA-directed DNA polymerase activity	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_02159	A	A1S	Potri.001G206600	Potri.001G206600(AS)	POPTR_0001s21410	sp|Q9SZ67|WRK19_ARATH	Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1	AT5G64550.1	| Symbols: | loricrin-related | chr5:25801794-25803698 REVERSE LENGTH=634	LOC_Os04g54830.1	protein|expressed protein	IMGA|contig_83807_1.1	Unknown protein contig_83807 2620-1 E PREDN 20111014	NA	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_02160	A	A1S	Potri.001G206700	Potri.001G206700(AS)	POPTR_0001s21420	sp|Q94F62|BAK1_ARATH	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2	AT4G33430.1	| Symbols: BAK1, RKS10, SERK3, ELG, ATSERK3, ATBAK1 | BRI1-associated receptor kinase | chr4:16086654-16090288 REVERSE LENGTH=615	LOC_Os08g07760.1	protein|BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	IMGA|Medtr5g033820.1	Leucine-rich repeat receptor-like kinase chr5 14174963-14169961 E EGN_Mt100125 20111014	GO:0002229|defense response to oomycetes GO:0002679|respiratory burst involved in defense response GO:0006468|protein phosphorylation GO:0006612|protein targeting to membrane GO:0008219|cell death GO:0009742|brassinosteroid mediated signaling pathway GO:0009863|salicylic acid mediated signaling pathway GO:0010200|response to chitin GO:0010363|regulation of plant-type hypersensitive response GO:0016049|cell growth GO:0016310|phosphorylation GO:0030968|endoplasmic reticulum unfolded protein response GO:0042742|defense response to bacterium GO:0043069|negative regulation of programmed cell death GO:0050832|defense response to fungus	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005515|protein binding GO:0016301|kinase activity GO:0033612|receptor serine/threonine kinase binding GO:0046982|protein heterodimerization activity	GO:0005768|endosome GO:0005886|plasma membrane GO:0043234|protein complex
pt2_02161	A	A1S	Potri.001G206800	Potri.001G206800(AS)	POPTR_0001s21430	sp|A5JTQ3|XYL2_MEDSV	Beta-xylosidase/alpha-L-arabinofuranosidase 2 OS=Medicago sativa subsp. varia GN=Xyl2 PE=2 SV=1	AT5G64570.1	| Symbols: XYL4, ATBXL4 | beta-D-xylosidase 4 | chr5:25810227-25813309 REVERSE LENGTH=784	LOC_Os04g54810.1	protein|beta-D-xylosidase, putative, expressed	IMGA|Medtr5g062430.1	Xylan 1 4-beta-xylosidase chr5 25153086-25159051 E EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0045493|xylan catabolic process	GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0009044|xylan 1,4-beta-xylosidase activity	GO:0005576|extracellular region GO:0005618|cell wall GO:0048046|apoplast
pt2_02162	A	A1S	Potri.001G206900	Potri.001G206900(AS)	POPTR_0001s21440	sp|Q52QH4|NAC68_ORYSJ	NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1	AT5G64530.1	| Symbols: ANAC104, XND1 | xylem NAC domain 1 | chr5:25795360-25796699 FORWARD LENGTH=187	LOC_Os02g34970.1	protein|no apical meristem protein, putative, expressed	IMGA|Medtr5g041940.1	NAC domain protein chr5 18013715-18012368 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0007275|multicellular organismal development GO:0010089|xylem development GO:0043067|regulation of programmed cell death GO:0048367|shoot development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02163	A	A1S	Potri.001G207000	Potri.001G207000(AS)	POPTR_0001s21450	sp|Q6NS23|TRM11_XENLA	tRNA (guanine(10)-N2)-methyltransferase homolog OS=Xenopus laevis GN=trmt11 PE=2 SV=1	AT3G26410.1	| Symbols: TRM11, AtTRM11 | methyltransferases;nucleic acid binding | chr3:9669508-9671273 REVERSE LENGTH=477	LOC_Os02g35060.1	protein|RNA methyltransferase protein, putative, expressed	NA	NA	GO:0006400|tRNA modification GO:0006626|protein targeting to mitochondrion GO:0032259|methylation GO:0080180|2-methylguanosine metabolic process	GO:0003676|nucleic acid binding GO:0008168|methyltransferase activity	GO:0005737|cytoplasm
pt2_02164	A	A1S	Potri.001G207100	Potri.001G207100(AS)	POPTR_0001s21460	sp|P49310|GRP1_SINAL	Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba PE=2 SV=1	AT3G26420.1	| Symbols: ATRZ-1A | RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain | chr3:9671953-9673055 FORWARD LENGTH=245	LOC_Os03g61990.3	protein|glycine-rich RNA-binding protein 7, putative, expressed	IMGA|Medtr1g064230.1	30 kDa ribonucleoprotein chr1 16472870-16475342 F EGN_Mt100125 20111014	GO:0009409|response to cold GO:0009631|cold acclimation	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding GO:0008270|zinc ion binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol
pt2_02165	A	A1S	Potri.001G207400	Potri.001G207400(AS)	POPTR_0001s21465	NA	NA	NA	NA	LOC_Os04g40450.1	protein|retrotransposon protein, putative, unclassified, expressed	IMGA|Medtr5g083380.1	hypothetical protein chr5 34998886-34997843 H EGN_Mt100125 20111014	NA	NA	NA
pt2_02166	A	A1S	Potri.001G207500	Potri.001G207500(AS)	POPTR_0001s21470	sp|Q9SPU7|TERT_ARATH	Telomerase reverse transcriptase OS=Arabidopsis thaliana GN=TERT PE=1 SV=1	AT5G16850.1	| Symbols: ATTERT, TERT | telomerase reverse transcriptase | chr5:5538323-5543444 REVERSE LENGTH=1123	LOC_Os12g19549.1	protein|telomerase reverse transcriptase, putative, expressed	NA	NA	GO:0000723|telomere maintenance GO:0006278|RNA-dependent DNA replication GO:0007000|nucleolus organization GO:0007004|telomere maintenance via telomerase GO:0050000|chromosome localization GO:0051276|chromosome organization	GO:0003677|DNA binding GO:0003720|telomerase activity GO:0003721|telomeric template RNA reverse transcriptase activity GO:0003723|RNA binding GO:0003964|RNA-directed DNA polymerase activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_02167	A	A1S	Potri.001G207600	Potri.001G207600(AS)	POPTR_0001s21480	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02168	A	A1S	Potri.001G207700	Potri.001G207700(AS)	POPTR_0001s21490	sp|Q6FK48|SWR1_CANGA	Helicase SWR1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SWR1 PE=3 SV=1	AT3G12810.1	| Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containing protein / helicase domain-containing protein | chr3:4065636-4073992 FORWARD LENGTH=2055	LOC_Os02g46450.1	protein|helicase conserved C-terminal domain containing protein, expressed	IMGA|Medtr5g005840.1	Chromatin remodeling complex subunit chr5 407817-415760 E EGN_Mt100125 20111014	GO:0003002|regionalization GO:0006338|chromatin remodeling GO:0007155|cell adhesion GO:0009793|embryo development ending in seed dormancy GO:0009909|regulation of flower development GO:0009910|negative regulation of flower development GO:0010090|trichome morphogenesis GO:0010228|vegetative to reproductive phase transition of meristem GO:0033043|regulation of organelle organization GO:0042742|defense response to bacterium GO:0045010|actin nucleation GO:0046686|response to cadmium ion GO:0048441|petal development GO:0048449|floral organ formation GO:0048451|petal formation GO:0048453|sepal formation GO:0048765|root hair cell differentiation GO:0071555|cell wall organization	GO:0003676|nucleic acid binding GO:0003677|DNA binding GO:0004386|helicase activity GO:0005515|protein binding GO:0005524|ATP binding	GO:0005618|cell wall GO:0005634|nucleus GO:0016514|SWI/SNF complex GO:0016585|chromatin remodeling complex
pt2_02169	A	A1S	Potri.001G207700	Potri.001G207700(AS)	POPTR_0001s21490	sp|Q6FK48|SWR1_CANGA	Helicase SWR1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SWR1 PE=3 SV=1	AT3G12810.1	| Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containing protein / helicase domain-containing protein | chr3:4065636-4073992 FORWARD LENGTH=2055	LOC_Os02g46450.1	protein|helicase conserved C-terminal domain containing protein, expressed	IMGA|Medtr5g005840.1	Chromatin remodeling complex subunit chr5 407817-415760 E EGN_Mt100125 20111014	GO:0003002|regionalization GO:0006338|chromatin remodeling GO:0007155|cell adhesion GO:0009793|embryo development ending in seed dormancy GO:0009909|regulation of flower development GO:0009910|negative regulation of flower development GO:0010090|trichome morphogenesis GO:0010228|vegetative to reproductive phase transition of meristem GO:0033043|regulation of organelle organization GO:0042742|defense response to bacterium GO:0045010|actin nucleation GO:0046686|response to cadmium ion GO:0048441|petal development GO:0048449|floral organ formation GO:0048451|petal formation GO:0048453|sepal formation GO:0048765|root hair cell differentiation GO:0071555|cell wall organization	GO:0003676|nucleic acid binding GO:0003677|DNA binding GO:0004386|helicase activity GO:0005515|protein binding GO:0005524|ATP binding	GO:0005618|cell wall GO:0005634|nucleus GO:0016514|SWI/SNF complex GO:0016585|chromatin remodeling complex
pt2_02170	A	A1S	Potri.001G207800	Potri.001G207800(AS)	POPTR_0001s21500	sp|Q6ZRS2|SRCAP_HUMAN	Helicase SRCAP OS=Homo sapiens GN=SRCAP PE=1 SV=3	AT3G12810.1	| Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containing protein / helicase domain-containing protein | chr3:4065636-4073992 FORWARD LENGTH=2055	NA	NA	IMGA|contig_110911_1.1	E1a binding protein P400 contig_110911 5504-549 H PREDN 20111014	GO:0003002|regionalization GO:0006338|chromatin remodeling GO:0007155|cell adhesion GO:0009793|embryo development ending in seed dormancy GO:0009909|regulation of flower development GO:0009910|negative regulation of flower development GO:0010090|trichome morphogenesis GO:0010228|vegetative to reproductive phase transition of meristem GO:0033043|regulation of organelle organization GO:0042742|defense response to bacterium GO:0045010|actin nucleation GO:0046686|response to cadmium ion GO:0048441|petal development GO:0048449|floral organ formation GO:0048451|petal formation GO:0048453|sepal formation GO:0048765|root hair cell differentiation GO:0071555|cell wall organization	GO:0003676|nucleic acid binding GO:0003677|DNA binding GO:0004386|helicase activity GO:0005515|protein binding GO:0005524|ATP binding	GO:0005618|cell wall GO:0005634|nucleus GO:0016514|SWI/SNF complex GO:0016585|chromatin remodeling complex
pt2_02171	A	A1S	Potri.001G207900	Potri.001G207900(AS)	POPTR_0001s21520	sp|P43255|CSN8_ARATH	COP9 signalosome complex subunit 8 OS=Arabidopsis thaliana GN=CSN8 PE=1 SV=1	AT4G14110.1	| Symbols: COP9, CSN8, FUS7, EMB143 | COP9 signalosome, subunit CSN8 | chr4:8133049-8134867 REVERSE LENGTH=197	LOC_Os04g34930.1	protein|COP9 signalosome complex subunit 8, putative, expressed	NA	NA	GO:0000338|protein deneddylation GO:0006626|protein targeting to mitochondrion GO:0009416|response to light stimulus GO:0009640|photomorphogenesis GO:0009753|response to jasmonic acid stimulus GO:0010387|signalosome assembly GO:0010388|cullin deneddylation	GO:0004222|metalloendopeptidase activity GO:0005515|protein binding	GO:0005634|nucleus GO:0008180|signalosome
pt2_02172	C	C1S	Potri.001G208000	Potri.001G208000(CS)	NA	NA	AT2G01080.1	| Symbols: | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | chr2:78038-79176 FORWARD LENGTH=231	LOC_Os03g15630.1	protein|harpin-induced protein 1 domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005886|plasma membrane
pt2_02173	A	A1S	Potri.001G208100	Potri.001G208100(AS)	POPTR_0001s21540	NA	NA	AT2G04865.1	| Symbols: | Aminotransferase-like, plant mobile domain family protein | chr2:1712149-1714599 FORWARD LENGTH=667	LOC_Os03g31839.1	protein|transposon protein, putative, unclassified, expressed	IMGA|Medtr5g072460.1	Ubiquitin-activating enzyme E1 chr5 29824205-29811181 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02174	A	A1S	Potri.001G208200	Potri.001G208200(AS)	POPTR_0001s21550	NA	NA	AT1G15200.1	| Symbols: | protein-protein interaction regulator family protein | chr1:5228477-5231017 REVERSE LENGTH=423	LOC_Os03g49520.1	protein|pinin/SDK/memA protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02175	R	R	NA	NA	POPTR_0001s21560	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02176	A	A1S	Potri.001G208600	Potri.001G208600(AS)	POPTR_0001s21580	sp|Q9C9F0|WRKY9_ARATH	Probable WRKY transcription factor 9 OS=Arabidopsis thaliana GN=WRKY9 PE=2 SV=1	AT1G68150.1	| Symbols: WRKY9, ATWRKY9 | WRKY DNA-binding protein 9 | chr1:25543970-25545615 FORWARD LENGTH=374	LOC_Os02g53100.1	protein|WRKY32, expressed	IMGA|Medtr5g074400.1	WRKY transcription factor chr5 30616836-30613078 E EGN_Mt100125 20111014	GO:0000041|transition metal ion transport GO:0006355|regulation of transcription, DNA-dependent GO:0006826|iron ion transport GO:0010043|response to zinc ion GO:0010106|cellular response to iron ion starvation GO:0010167|response to nitrate GO:0015706|nitrate transport	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_02177	A	A1S	Potri.001G208700	Potri.001G208700(AS)	POPTR_0001s21600	sp|O14777|NDC80_HUMAN	Kinetochore protein NDC80 homolog OS=Homo sapiens GN=NDC80 PE=1 SV=1	AT3G54630.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Kinetochore protein Ndc80 (InterPro:IPR005550); Has 24780 Blast hits to 15608 proteins in 1321 species: Archae - 545; Bacteria - 2969; Metazoa - 12597; Fungi - 2181; Plants - 1581; Viruses - 39; Other Eukaryotes - 4868 (source: NCBI BLink). | chr3:20221195-20222901 REVERSE LENGTH=568	LOC_Os08g36490.1	protein|kinetochore protein, putative, expressed	NA	NA	GO:0006260|DNA replication GO:0006306|DNA methylation GO:0007067|mitosis GO:0007129|synapsis GO:0007131|reciprocal meiotic recombination GO:0008150|biological_process GO:0008283|cell proliferation GO:0010564|regulation of cell cycle process GO:0048451|petal formation GO:0048453|sepal formation GO:0051567|histone H3-K9 methylation	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02178	A	A1S	Potri.001G208800	Potri.001G208800(AS)	POPTR_0001s21610	NA	NA	AT1G68140.3	| Symbols: | Protein of unknown function (DUF1644) | chr1:25539410-25540414 REVERSE LENGTH=334	LOC_Os02g53110.2	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_02179	R	R	NA	NA	POPTR_0001s21620	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02180	A	A1S	Potri.001G209000	Potri.001G209000(AS)	POPTR_0001s21630	sp|Q9SMY6|PME45_ARATH	Putative pectinesterase/pectinesterase inhibitor 45 OS=Arabidopsis thaliana GN=PME45 PE=2 SV=1	AT4G33230.1	| Symbols: | Plant invertase/pectin methylesterase inhibitor superfamily | chr4:16026591-16028754 REVERSE LENGTH=609	LOC_Os04g38560.1	protein|pectinesterase, putative, expressed	IMGA|Medtr1g083490.1	Pectinesterase chr1 21669361-21667322 E EGN_Mt100125 20111014	GO:0009860|pollen tube growth GO:0042545|cell wall modification	GO:0004857|enzyme inhibitor activity GO:0030599|pectinesterase activity	GO:0005618|cell wall GO:0009505|plant-type cell wall
pt2_02181	A	A1S	Potri.001G209100	Potri.001G209100(AS)	POPTR_0001s21640	sp|Q6PH11|WIBG_DANRE	Partner of Y14 and mago OS=Danio rerio GN=wibg PE=2 SV=1	AT1G11400.3	| Symbols: PYM | partner of Y14-MAGO | chr1:3838777-3839978 FORWARD LENGTH=204	LOC_Os03g15560.1	protein|wibg, putative, expressed	NA	NA	GO:0006396|RNA processing GO:0010628|positive regulation of gene expression	GO:0005515|protein binding	GO:0005634|nucleus GO:0005654|nucleoplasm GO:0005730|nucleolus GO:0005737|cytoplasm
pt2_02182	A	A1S	Potri.001G209200	Potri.001G209200(AS)	POPTR_0001s21650	sp|Q9FJ21|PME58_ARATH	Probable pectinesterase/pectinesterase inhibitor 58 OS=Arabidopsis thaliana GN=PME58 PE=2 SV=1	AT5G49180.1	| Symbols: | Plant invertase/pectin methylesterase inhibitor superfamily | chr5:19940783-19942876 REVERSE LENGTH=571	LOC_Os04g38560.1	protein|pectinesterase, putative, expressed	IMGA|Medtr1g083490.1	Pectinesterase chr1 21669361-21667322 E EGN_Mt100125 20111014	GO:0042545|cell wall modification	GO:0004857|enzyme inhibitor activity GO:0030599|pectinesterase activity	GO:0005618|cell wall GO:0009505|plant-type cell wall
pt2_02183	A	A1S	Potri.001G209300	Potri.001G209300(AS)	POPTR_0001s21660	sp|Q8LG89|BABL_ARATH	Basic blue protein OS=Arabidopsis thaliana GN=ARPN PE=1 SV=2	AT2G02850.1	| Symbols: ARPN | plantacyanin | chr2:826630-827720 REVERSE LENGTH=129	LOC_Os03g50160.1	protein|plastocyanin-like domain containing protein, putative, expressed	IMGA|Medtr5g006040.1	Early nodulin-like protein chr5 502223-501280 F EGN_Mt100125 20111014	GO:0009640|photomorphogenesis GO:0009737|response to abscisic acid stimulus GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009856|pollination GO:0009909|regulation of flower development GO:0009933|meristem structural organization GO:0010162|seed dormancy process GO:0010182|sugar mediated signaling pathway GO:0010228|vegetative to reproductive phase transition of meristem GO:0016567|protein ubiquitination GO:0019915|lipid storage GO:0048653|anther development GO:0050826|response to freezing	GO:0005507|copper ion binding GO:0009055|electron carrier activity	GO:0005886|plasma membrane GO:0048046|apoplast GO:0048196|plant extracellular matrix
pt2_02184	A	A1S	Potri.001G209400	Potri.001G209400(AS)	POPTR_0001s21670	sp|Q8BKU8|TM87B_MOUSE	Transmembrane protein 87B OS=Mus musculus GN=Tmem87b PE=2 SV=1	AT2G01070.1	| Symbols: | Lung seven transmembrane receptor family protein | chr2:75596-77625 FORWARD LENGTH=496	LOC_Os11g34360.1	protein|lung seven transmembrane domain containing protein, putative, expressed	IMGA|Medtr5g067670.1	Transmembrane protein 87B chr5 27609093-27604465 E EGN_Mt100125 20111014	GO:0006084|acetyl-CoA metabolic process GO:0008150|biological_process GO:0016126|sterol biosynthetic process GO:0016132|brassinosteroid biosynthetic process	GO:0003674|molecular_function	GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0016021|integral to membrane
pt2_02185	A	A1S	Potri.001G209400	Potri.001G209400(AS)	POPTR_0001s21670	sp|Q8BKU8|TM87B_MOUSE	Transmembrane protein 87B OS=Mus musculus GN=Tmem87b PE=2 SV=1	AT2G01070.1	| Symbols: | Lung seven transmembrane receptor family protein | chr2:75596-77625 FORWARD LENGTH=496	LOC_Os11g34360.1	protein|lung seven transmembrane domain containing protein, putative, expressed	IMGA|Medtr5g067670.1	Transmembrane protein 87B chr5 27609093-27604465 E EGN_Mt100125 20111014	GO:0006084|acetyl-CoA metabolic process GO:0008150|biological_process GO:0016126|sterol biosynthetic process GO:0016132|brassinosteroid biosynthetic process	GO:0003674|molecular_function	GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0016021|integral to membrane
pt2_02186	A	A1S	Potri.001G209400	Potri.001G209400(AS)	POPTR_0001s21670	sp|Q8BKU8|TM87B_MOUSE	Transmembrane protein 87B OS=Mus musculus GN=Tmem87b PE=2 SV=1	AT2G01070.1	| Symbols: | Lung seven transmembrane receptor family protein | chr2:75596-77625 FORWARD LENGTH=496	LOC_Os11g34360.1	protein|lung seven transmembrane domain containing protein, putative, expressed	IMGA|Medtr5g067670.1	Transmembrane protein 87B chr5 27609093-27604465 E EGN_Mt100125 20111014	GO:0006084|acetyl-CoA metabolic process GO:0008150|biological_process GO:0016126|sterol biosynthetic process GO:0016132|brassinosteroid biosynthetic process	GO:0003674|molecular_function	GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0016021|integral to membrane
pt2_02187	A	A1S	Potri.001G209500	Potri.001G209500(AS)	POPTR_0001s21680	sp|Q8BJ56|PLPL2_MOUSE	Patatin-like phospholipase domain-containing protein 2 OS=Mus musculus GN=Pnpla2 PE=1 SV=1	AT1G33270.1	| Symbols: | Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein | chr1:12068324-12070157 REVERSE LENGTH=369	LOC_Os11g34370.1	protein|phospholipase, patatin family, putative, expressed	NA	NA	GO:0006629|lipid metabolic process	NA	GO:0005886|plasma membrane
pt2_02188	A	A1S	Potri.001G209600	Potri.001G209600(AS)	POPTR_0001s21690	sp|Q9LU85|PAP4_ARATH	Probable plastid-lipid-associated protein 4, chloroplastic OS=Arabidopsis thaliana GN=PAP4 PE=1 SV=1	AT3G26070.1	| Symbols: | Plastid-lipid associated protein PAP / fibrillin family protein | chr3:9526904-9528199 FORWARD LENGTH=242	LOC_Os03g49720.1	protein|PAP fibrillin family domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0005198|structural molecule activity	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0010287|plastoglobule
pt2_02189	A	A2S	Potri.001G209600	Potri.001G209600(AS) Potri.001G209700(AA)	POPTR_0001s21690	sp|Q9LU85|PAP4_ARATH	Probable plastid-lipid-associated protein 4, chloroplastic OS=Arabidopsis thaliana GN=PAP4 PE=1 SV=1	AT3G26070.1	| Symbols: | Plastid-lipid associated protein PAP / fibrillin family protein | chr3:9526904-9528199 FORWARD LENGTH=242	LOC_Os03g49720.1	protein|PAP fibrillin family domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0005198|structural molecule activity	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0010287|plastoglobule
pt2_02190	A	A1S	Potri.001G209600	Potri.001G209600(AS)	POPTR_0001s21690	sp|Q9LU85|PAP4_ARATH	Probable plastid-lipid-associated protein 4, chloroplastic OS=Arabidopsis thaliana GN=PAP4 PE=1 SV=1	AT3G26070.1	| Symbols: | Plastid-lipid associated protein PAP / fibrillin family protein | chr3:9526904-9528199 FORWARD LENGTH=242	LOC_Os03g49720.1	protein|PAP fibrillin family domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0005198|structural molecule activity	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0010287|plastoglobule
pt2_02191	A	A1S	Potri.001G209600	Potri.001G209600(AS)	POPTR_0001s21690	sp|Q9LU85|PAP4_ARATH	Probable plastid-lipid-associated protein 4, chloroplastic OS=Arabidopsis thaliana GN=PAP4 PE=1 SV=1	AT3G26070.1	| Symbols: | Plastid-lipid associated protein PAP / fibrillin family protein | chr3:9526904-9528199 FORWARD LENGTH=242	LOC_Os03g49720.1	protein|PAP fibrillin family domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0005198|structural molecule activity	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0010287|plastoglobule
pt2_02192	A	A1S	Potri.001G209700	Potri.001G209700(AS)	POPTR_0001s21700	sp|Q9FHK7|Y5516_ARATH	Probable leucine-rich repeat receptor-like protein kinase At5g05160 OS=Arabidopsis thaliana GN=At5g05160 PE=1 SV=1	AT5G05160.1	| Symbols: | Leucine-rich repeat protein kinase family protein | chr5:1528000-1530017 FORWARD LENGTH=640	LOC_Os01g04230.1	protein|inactive receptor kinase At2g26730 precursor, putative, expressed	IMGA|Medtr1g061590.1	hypothetical protein chr1 15709146-15711715 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway GO:0010089|xylem development GO:0044036|cell wall macromolecule metabolic process GO:2000605|positive regulation of secondary growth	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005576|extracellular region GO:0005618|cell wall GO:0005886|plasma membrane
pt2_02193	C	C1A	Potri.001G209800	Potri.001G209800(CA)	NA	NA	AT5G64090.1	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Hyccin (InterPro:IPR018619); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G21050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:25648069-25649415 FORWARD LENGTH=448	LOC_Os11g06860.1	protein|expressed protein	IMGA|Medtr5g087660.1	Hyccin chr5 36994661-36993603 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_02194	A	A1S	Potri.001G209800	Potri.001G209800(AS)	POPTR_0001s21720	NA	NA	AT5G64090.1	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Hyccin (InterPro:IPR018619); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G21050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:25648069-25649415 FORWARD LENGTH=448	LOC_Os11g06860.1	protein|expressed protein	IMGA|Medtr5g087660.1	Hyccin chr5 36994661-36993603 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_02195	A	A1S	Potri.001G209900	Potri.001G209900(AS)	POPTR_0001s21730	sp|P73848|FABZ_SYNY3	(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=fabZ PE=3 SV=2	AT5G10160.1	| Symbols: | Thioesterase superfamily protein | chr5:3185819-3187159 FORWARD LENGTH=219	LOC_Os05g36000.1	protein|FabA-like domain containing protein, expressed	NA	NA	GO:0006633|fatty acid biosynthetic process GO:0006744|ubiquinone biosynthetic process	GO:0016836|hydro-lyase activity GO:0019171|3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity	GO:0005618|cell wall GO:0005737|cytoplasm GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009941|chloroplast envelope GO:0016020|membrane
pt2_02196	A	A1S	Potri.001G210000	Potri.001G210000(AS)	POPTR_0001s21740	sp|P27524|CB4A_SOLLC	Chlorophyll a-b binding protein CP24 10A, chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3 SV=1	AT1G15820.1	| Symbols: LHCB6, CP24 | light harvesting complex photosystem II subunit 6 | chr1:5446685-5447676 REVERSE LENGTH=258	LOC_Os04g38410.1	protein|chlorophyll A-B binding protein, putative, expressed	IMGA|Medtr5g098780.2	Chlorophyll a-b binding protein chr5 42222305-42216869 F EGN_Mt100125 20111014	GO:0006816|calcium ion transport GO:0007030|Golgi organization GO:0009651|response to salt stress GO:0009765|photosynthesis, light harvesting GO:0010196|nonphotochemical quenching GO:0015979|photosynthesis GO:0019344|cysteine biosynthetic process GO:0019684|photosynthesis, light reaction GO:0035304|regulation of protein dephosphorylation	GO:0016168|chlorophyll binding	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009579|thylakoid GO:0009783|photosystem II antenna complex GO:0009941|chloroplast envelope GO:0010287|plastoglobule GO:0016020|membrane
pt2_02197	A	A1S	Potri.001G210100	Potri.001G210100(AS)	POPTR_0001s21750	sp|Q8VYI9|NLTL5_ARATH	Non-specific lipid-transfer protein-like protein At5g64080 OS=Arabidopsis thaliana GN=At5g64080 PE=1 SV=1	AT5G64080.2	| Symbols: | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr5:25645475-25646638 REVERSE LENGTH=178	LOC_Os03g09230.2	protein|LTPL69 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	IMGA|Medtr5g070360.1	Non-specific lipid-transfer protein chr5 28816605-28814460 F EGN_Mt100125 20111014	GO:0006869|lipid transport	GO:0008289|lipid binding	GO:0005886|plasma membrane GO:0031225|anchored to membrane GO:0046658|anchored to plasma membrane
pt2_02198	A	A1S	Potri.001G210300	Potri.001G210300(AS)	POPTR_0001s21770	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02199	A	A1S	Potri.001G210200	Potri.001G210200(AS)	POPTR_0001s21780	NA	NA	AT1G71240.2	| Symbols: | Plant protein of unknown function (DUF639) | chr1:26855489-26859599 FORWARD LENGTH=823	LOC_Os01g64870.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_02200	A	A1S	Potri.001G210400	Potri.001G210400(AS)	POPTR_0001s21790	sp|P50699|TLPH_ARATH	Thaumatin-like protein OS=Arabidopsis thaliana GN=At1g18250 PE=2 SV=2	AT1G77700.1	| Symbols: | Pathogenesis-related thaumatin superfamily protein | chr1:29204747-29206217 FORWARD LENGTH=356	LOC_Os04g59370.1	protein|thaumatin, putative, expressed	IMGA|Medtr5g059200.1	Pathogenesis-related protein chr5 23780576-23781889 E EGN_Mt100125 20111014	GO:0051707|response to other organism	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005576|extracellular region
pt2_02201	A	A1S	Potri.001G210500	Potri.001G210500(AS)	POPTR_0001s21800	NA	NA	AT5G24690.1	| Symbols: | Protein of unknown function (DUF3411) | chr5:8455783-8458513 REVERSE LENGTH=521	LOC_Os12g18630.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	NA	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009536|plastid GO:0009706|chloroplast inner membrane GO:0009941|chloroplast envelope
pt2_02202	A	A2S	Potri.001G210500	Potri.001G210500(AS) Potri.003G019600(DS)	POPTR_0001s21800	NA	NA	AT5G24690.1	| Symbols: | Protein of unknown function (DUF3411) | chr5:8455783-8458513 REVERSE LENGTH=521	LOC_Os12g18630.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	NA	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009536|plastid GO:0009706|chloroplast inner membrane GO:0009941|chloroplast envelope
pt2_02203	A	A1S	Potri.001G210500	Potri.001G210500(AS)	POPTR_0001s21800	NA	NA	AT5G24690.1	| Symbols: | Protein of unknown function (DUF3411) | chr5:8455783-8458513 REVERSE LENGTH=521	LOC_Os12g18630.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	NA	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009536|plastid GO:0009706|chloroplast inner membrane GO:0009941|chloroplast envelope
pt2_02204	A	A1S	Potri.001G210600	Potri.001G210600(AS)	POPTR_0001s21810	NA	NA	AT1G10790.1	| Symbols: | BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT3G56590.2); Has 78 Blast hits to 78 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:3596360-3597847 FORWARD LENGTH=336	LOC_Os09g28110.1	protein|hydroxyproline-rich glycoprotein family protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_02205	C	C1S	Potri.001G210600	Potri.001G210600(CS)	NA	NA	AT1G10790.1	| Symbols: | BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT3G56590.2); Has 78 Blast hits to 78 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:3596360-3597847 FORWARD LENGTH=336	LOC_Os09g28110.1	protein|hydroxyproline-rich glycoprotein family protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_02206	A	A1S	Potri.001G210800	Potri.001G210800(AS)	POPTR_0001s21830	sp|Q9SAC4|FB2_ARATH	F-box protein At1g10780 OS=Arabidopsis thaliana GN=At1g10780 PE=2 SV=1	AT1G10780.1	| Symbols: | F-box/RNI-like superfamily protein | chr1:3592875-3594310 REVERSE LENGTH=418	LOC_Os09g28120.1	protein|OsFBX330 - F-box domain containing protein, expressed	NA	NA	GO:0006270|DNA replication initiation GO:0006275|regulation of DNA replication GO:0008150|biological_process GO:0008283|cell proliferation GO:0010389|regulation of G2/M transition of mitotic cell cycle GO:0016572|histone phosphorylation GO:0051726|regulation of cell cycle	GO:0003674|molecular_function	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_02207	A	A1S	Potri.001G210900	Potri.001G210900(AS)	POPTR_0001s21840	sp|P49755|TMEDA_HUMAN	Transmembrane emp24 domain-containing protein 10 OS=Homo sapiens GN=TMED10 PE=1 SV=2	AT1G09580.1	| Symbols: | emp24/gp25L/p24 family/GOLD family protein | chr1:3104657-3106092 FORWARD LENGTH=217	LOC_Os02g52920.1	protein|emp24/gp25L/p24 family protein, putative, expressed	IMGA|Medtr5g058140.1	Transmembrane emp24 domain-containing protein chr5 23359695-23355297 F EGN_Mt100125 20111014	GO:0006810|transport GO:0006886|intracellular protein transport	GO:0008320|protein transmembrane transporter activity	GO:0016020|membrane GO:0016021|integral to membrane
pt2_02208	A	A1S	Potri.001G211000	Potri.001G211000(AS)	POPTR_0001s21850	sp|P0CB26|Y1089_ARATH	Uncharacterized protein At1g10890 OS=Arabidopsis thaliana GN=At1g10890 PE=1 SV=1	AT1G10890.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: petal, flower, leaf; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13340.1); Has 11769 Blast hits to 8435 proteins in 698 species: Archae - 22; Bacteria - 971; Metazoa - 5937; Fungi - 1065; Plants - 592; Viruses - 101; Other Eukaryotes - 3081 (source: NCBI BLink). | chr1:3628081-3630545 FORWARD LENGTH=288	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_02209	A	A1S	Potri.001G211200	Potri.001G211200(AS)	POPTR_0001s21870	sp|Q8RY89|PI5K8_ARATH	Phosphatidylinositol 4-phosphate 5-kinase 8 OS=Arabidopsis thaliana GN=PIP5K8 PE=2 SV=1	AT1G60890.1	| Symbols: | Phosphatidylinositol-4-phosphate 5-kinase family protein | chr1:22412452-22416338 REVERSE LENGTH=769	LOC_Os03g49510.1	protein|phosphatidylinositol-4-phosphate 5-kinase, putative, expressed	IMGA|contig_103915_1.1	Phosphatidylinositol-4-phosphate 5-kinase contig_103915 377-2402 F PREDN 20111014	GO:0046488|phosphatidylinositol metabolic process	GO:0005524|ATP binding GO:0016307|phosphatidylinositol phosphate kinase activity GO:0016308|1-phosphatidylinositol-4-phosphate 5-kinase activity	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_02210	A	A1S	Potri.001G211300	Potri.001G211300(AS)	POPTR_0001s21880	sp|Q0WVV0|PPR31_ARATH	Pentatricopeptide repeat-containing protein At1g10910, chloroplastic OS=Arabidopsis thaliana GN=At1g10910 PE=2 SV=1	AT1G10910.1	| Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:3639908-3643974 FORWARD LENGTH=664	LOC_Os01g37870.1	protein|PPR repeat domain containing protein, putative, expressed	IMGA|Medtr5g008300.1	Pentatricopeptide repeat-containing protein chr5 1493031-1498664 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0008150|biological_process	NA	GO:0005739|mitochondrion
pt2_02211	A	A1S	Potri.001G211400	Potri.001G211400(AS)	POPTR_0001s21890	sp|Q9C992|KCS7_ARATH	3-ketoacyl-CoA synthase 7 OS=Arabidopsis thaliana GN=KCS7 PE=2 SV=1	AT1G71160.1	| Symbols: KCS7 | 3-ketoacyl-CoA synthase 7 | chr1:26828788-26830170 REVERSE LENGTH=460	LOC_Os03g12030.1	protein|3-ketoacyl-CoA synthase, putative, expressed	IMGA|contig_50040_2.1	3-ketoacyl-CoA synthase contig_50040 6464-7831 H PREDN 20111014	GO:0000038|very long-chain fatty acid metabolic process GO:0006633|fatty acid biosynthetic process GO:0008152|metabolic process GO:0008610|lipid biosynthetic process GO:0042335|cuticle development	GO:0003824|catalytic activity GO:0016746|transferase activity, transferring acyl groups GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0009507|chloroplast GO:0016020|membrane
pt2_02212	A	A1S	Potri.001G211500	Potri.001G211500(AS)	POPTR_0001s21900	sp|O34948|YKWC_BACSU	Uncharacterized oxidoreductase ykwC OS=Bacillus subtilis (strain 168) GN=ykwC PE=3 SV=1	AT1G71180.1	| Symbols: | 6-phosphogluconate dehydrogenase family protein | chr1:26832335-26833291 FORWARD LENGTH=318	LOC_Os05g49070.1	protein|dehydrogenase, putative, expressed	NA	NA	GO:0006098|pentose-phosphate shunt GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0004616|phosphogluconate dehydrogenase (decarboxylating) activity GO:0016491|oxidoreductase activity GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0050662|coenzyme binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02213	C	C1S	Potri.001G211600	Potri.001G211600(CS)	NA	NA	AT1G71190.1	| Symbols: SAG18 | senescence associated gene 18 | chr1:26833597-26834982 REVERSE LENGTH=281	LOC_Os01g73120.1	protein|expressed protein	IMGA|Medtr1g016080.1	hypothetical protein chr1 4605962-4602851 H EGN_Mt100125 20111014	GO:0006672|ceramide metabolic process	GO:0016811|hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	GO:0009507|chloroplast GO:0016021|integral to membrane
pt2_02214	A	A1S	Potri.001G211700	Potri.001G211700(AS)	POPTR_0001s21920	sp|Q4ZIN3|MBRL_HUMAN	Membralin OS=Homo sapiens GN=C19orf6 PE=1 SV=1	AT1G60995.1	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Membralin (InterPro:IPR019144); Has 172 Blast hits to 170 proteins in 70 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). | chr1:22465768-22470575 REVERSE LENGTH=623	LOC_Os03g45770.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion GO:0005783|endoplasmic reticulum
pt2_02215	A	A1S	Potri.001G211700	Potri.001G211700(AS)	POPTR_0001s21920	sp|Q4ZIN3|MBRL_HUMAN	Membralin OS=Homo sapiens GN=C19orf6 PE=1 SV=1	AT1G60995.1	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Membralin (InterPro:IPR019144); Has 172 Blast hits to 170 proteins in 70 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). | chr1:22465768-22470575 REVERSE LENGTH=623	LOC_Os03g45770.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion GO:0005783|endoplasmic reticulum
pt2_02216	A	A1S	Potri.001G211700	Potri.001G211700(AS)	POPTR_0001s21920	sp|Q4ZIN3|MBRL_HUMAN	Membralin OS=Homo sapiens GN=C19orf6 PE=1 SV=1	AT1G60995.1	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Membralin (InterPro:IPR019144); Has 172 Blast hits to 170 proteins in 70 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). | chr1:22465768-22470575 REVERSE LENGTH=623	LOC_Os03g45770.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion GO:0005783|endoplasmic reticulum
pt2_02217	A	A1S	Potri.001G211800	Potri.001G211800(AS)	POPTR_0001s21930	sp|Q80Y75|DJB13_MOUSE	DnaJ homolog subfamily B member 13 OS=Mus musculus GN=Dnajb13 PE=2 SV=1	AT1G11040.1	| Symbols: | HSP40/DnaJ peptide-binding protein | chr1:3679225-3680924 REVERSE LENGTH=438	LOC_Os01g65480.1	protein|dnaJ domain containing protein, expressed	IMGA|Medtr5g037880.1	DnaJ homolog subfamily B member chr5 16131554-16134251 F EGN_Mt100125 20111014	GO:0006457|protein folding	GO:0031072|heat shock protein binding GO:0051082|unfolded protein binding	GO:0005634|nucleus
pt2_02218	A	A1S	Potri.001G211900	Potri.001G211900(AS)	POPTR_0001s21940	NA	NA	AT1G22030.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G77855.1); Has 99 Blast hits to 99 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 96; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:7759337-7760415 REVERSE LENGTH=333	LOC_Os08g01400.1	protein|expressed protein	IMGA|Medtr5g060880.1	hypothetical protein chr5 24528016-24526257 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_02219	A	A1S	Potri.001G212000	Potri.001G212000(AS)	POPTR_0001s21950	sp|Q54Z26|GLYC1_DICDI	Serine hydroxymethyltransferase 1 OS=Dictyostelium discoideum GN=shmt1 PE=1 SV=1	AT1G36370.1	| Symbols: SHM7 | serine hydroxymethyltransferase 7 | chr1:13696240-13698576 REVERSE LENGTH=598	LOC_Os01g65410.1	protein|serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed	IMGA|Medtr5g030950.1	Serine hydroxymethyltransferase chr5 12843132-12838759 F EGN_Mt100125 20111014	GO:0006544|glycine metabolic process GO:0006563|L-serine metabolic process	GO:0003824|catalytic activity GO:0004372|glycine hydroxymethyltransferase activity GO:0030170|pyridoxal phosphate binding	NA
pt2_02220	G	G1	NA	NA	POPTR_0001s21955	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02221	A	A1S	Potri.001G212100	Potri.001G212100(AS)	POPTR_0001s21960	sp|Q9SJJ7|ATL57_ARATH	RING-H2 finger protein ATL57 OS=Arabidopsis thaliana GN=ATL57 PE=2 SV=1	AT2G27940.1	| Symbols: | RING/U-box superfamily protein | chr2:11897963-11898742 FORWARD LENGTH=237	LOC_Os09g29310.1	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr1g082550.1	RING finger family protein chr1 21249216-21250641 F EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0002679|respiratory burst involved in defense response GO:0002831|regulation of response to biotic stimulus GO:0006612|protein targeting to membrane GO:0006952|defense response GO:0009595|detection of biotic stimulus GO:0009611|response to wounding GO:0009612|response to mechanical stimulus GO:0009697|salicylic acid biosynthetic process GO:0009814|defense response, incompatible interaction GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0031348|negative regulation of defense response GO:0035556|intracellular signal transduction GO:0042742|defense response to bacterium GO:0043900|regulation of multi-organism process GO:0050832|defense response to fungus	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_02222	A	A1S	Potri.001G212200	Potri.001G212200(AS)	POPTR_0001s21970	sp|Q9SGE3|H2B2_ARATH	Histone H2B.2 OS=Arabidopsis thaliana GN=At1g08170 PE=2 SV=1	AT1G08170.1	| Symbols: | Histone superfamily protein | chr1:2562941-2563672 REVERSE LENGTH=243	LOC_Os01g62230.1	protein|Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed	IMGA|contig_170985_1.1	Histone H2B contig_170985 382-950 F PREDN 20111014	GO:0006334|nucleosome assembly	GO:0003677|DNA binding	GO:0000786|nucleosome GO:0005634|nucleus
pt2_02223	A	A1S	Potri.001G212300	Potri.001G212300(AS)	POPTR_0001s21980	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0005515|protein binding	GO:0005634|nucleus
pt2_02224	A	A1S	Potri.001G212400	Potri.001G212400(AS)	POPTR_0001s21990	NA	NA	AT2G27930.1	| Symbols: | PLATZ transcription factor family protein | chr2:11892369-11893488 FORWARD LENGTH=189	LOC_Os08g44620.1	protein|zinc-binding protein, putative, expressed	IMGA|Medtr5g007230.1	hypothetical protein chr5 1014435-1016598 F EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_02225	A	A1S	Potri.001G212500	Potri.001G212500(AS)	POPTR_0001s22000	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02226	A	A2S	Potri.001G212600	Potri.001G212600(AS) Potri.009G002900(DS)	POPTR_0001s22010	sp|Q96JG6|CC132_HUMAN	Coiled-coil domain-containing protein 132 OS=Homo sapiens GN=CCDC132 PE=1 SV=3	AT2G27900.2	| Symbols: | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein sorting-associated protein 54 (InterPro:IPR019515); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr2:11877654-11885238 FORWARD LENGTH=1124	LOC_Os10g39910.1	protein|expressed protein	NA	NA	GO:0006486|protein glycosylation GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02227	A	A1S	Potri.001G212700	Potri.001G212700(AS)	POPTR_0001s22040	sp|P93231|VPS41_SOLLC	Vacuolar protein sorting-associated protein 41 homolog OS=Solanum lycopersicum GN=VPS41 PE=2 SV=1	AT1G08190.1	| Symbols: ATVPS41, ZIP2, VPS41, ATVAM2, VAM2 | vacuolar protein sorting 41 | chr1:2567652-2573142 FORWARD LENGTH=980	LOC_Os04g11880.1	protein|WD domain, G-beta repeat domain containing protein, expressed	NA	NA	GO:0006623|protein targeting to vacuole GO:0006886|intracellular protein transport GO:0009630|gravitropism GO:0016192|vesicle-mediated transport	GO:0000166|nucleotide binding GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_02228	G	G1	NA	NA	POPTR_0001s22050	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02229	A	A1S	Potri.001G212900	Potri.001G212900(AS)	POPTR_0001s22060	sp|Q5RBU7|PCP_PONAB	Lysosomal Pro-X carboxypeptidase OS=Pongo abelii GN=PRCP PE=2 SV=1	AT5G22860.1	| Symbols: | Serine carboxypeptidase S28 family protein | chr5:7639511-7642945 REVERSE LENGTH=502	LOC_Os06g43930.1	protein|OsProCP2 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed	IMGA|contig_74944_1.1	Lysosomal pro-X carboxypeptidase contig_74944 302-1588 H PREDN 20111014	GO:0006508|proteolysis	GO:0008233|peptidase activity GO:0008236|serine-type peptidase activity	GO:0005576|extracellular region GO:0009507|chloroplast
pt2_02230	A	A1S	Potri.001G213000	Potri.001G213000(AS)	POPTR_0001s22070	sp|Q5RBU7|PCP_PONAB	Lysosomal Pro-X carboxypeptidase OS=Pongo abelii GN=PRCP PE=2 SV=1	AT5G22860.2	| Symbols: | Serine carboxypeptidase S28 family protein | chr5:7639907-7642945 REVERSE LENGTH=439	LOC_Os06g43930.2	protein|OsProCP2 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed	IMGA|contig_74944_1.1	Lysosomal pro-X carboxypeptidase contig_74944 302-1588 H PREDN 20111014	GO:0006508|proteolysis	GO:0008233|peptidase activity GO:0008236|serine-type peptidase activity	GO:0005576|extracellular region GO:0009507|chloroplast
pt2_02231	B	B2S	Potri.010G144800	Potri.010G144800(BS) Potri.001G345300(BS)	POPTR_0001s22085	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006612|protein targeting to membrane GO:0008150|biological_process GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010363|regulation of plant-type hypersensitive response	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_02232	A	A3S	Potri.001G213400	Potri.001G213400(AS) Potri.001G213200(BS) Potri.009G002200(DS)	POPTR_0001s22090	sp|Q7TMR0|PCP_MOUSE	Lysosomal Pro-X carboxypeptidase OS=Mus musculus GN=Prcp PE=2 SV=2	AT5G22860.1	| Symbols: | Serine carboxypeptidase S28 family protein | chr5:7639511-7642945 REVERSE LENGTH=502	LOC_Os06g43930.1	protein|OsProCP2 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed	IMGA|contig_74944_1.1	Lysosomal pro-X carboxypeptidase contig_74944 302-1588 H PREDN 20111014	GO:0006508|proteolysis	GO:0008233|peptidase activity GO:0008236|serine-type peptidase activity	GO:0005576|extracellular region GO:0009507|chloroplast
pt2_02233	A	A2S	Potri.001G213400	Potri.001G213400(AS) Potri.001G213200(DS)	POPTR_0001s22090	sp|Q7TMR0|PCP_MOUSE	Lysosomal Pro-X carboxypeptidase OS=Mus musculus GN=Prcp PE=2 SV=2	AT5G22860.1	| Symbols: | Serine carboxypeptidase S28 family protein | chr5:7639511-7642945 REVERSE LENGTH=502	LOC_Os06g43930.1	protein|OsProCP2 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed	IMGA|contig_74944_1.1	Lysosomal pro-X carboxypeptidase contig_74944 302-1588 H PREDN 20111014	GO:0006508|proteolysis	GO:0008233|peptidase activity GO:0008236|serine-type peptidase activity	GO:0005576|extracellular region GO:0009507|chloroplast
pt2_02234	A	A1S	Potri.001G213400	Potri.001G213400(AS)	POPTR_0001s22090	sp|Q7TMR0|PCP_MOUSE	Lysosomal Pro-X carboxypeptidase OS=Mus musculus GN=Prcp PE=2 SV=2	AT5G22860.1	| Symbols: | Serine carboxypeptidase S28 family protein | chr5:7639511-7642945 REVERSE LENGTH=502	LOC_Os06g43930.1	protein|OsProCP2 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed	IMGA|contig_74944_1.1	Lysosomal pro-X carboxypeptidase contig_74944 302-1588 H PREDN 20111014	GO:0006508|proteolysis	GO:0008233|peptidase activity GO:0008236|serine-type peptidase activity	GO:0005576|extracellular region GO:0009507|chloroplast
pt2_02235	A	A2S	Potri.001G213200	Potri.001G213200(AS) Potri.001G213400(BS)	POPTR_0001s22090	sp|Q7TMR0|PCP_MOUSE	Lysosomal Pro-X carboxypeptidase OS=Mus musculus GN=Prcp PE=2 SV=2	AT5G22860.1	| Symbols: | Serine carboxypeptidase S28 family protein | chr5:7639511-7642945 REVERSE LENGTH=502	LOC_Os06g43930.1	protein|OsProCP2 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed	IMGA|contig_74944_1.1	Lysosomal pro-X carboxypeptidase contig_74944 302-1588 H PREDN 20111014	GO:0006508|proteolysis	GO:0008233|peptidase activity GO:0008236|serine-type peptidase activity	GO:0005576|extracellular region GO:0009507|chloroplast
pt2_02236	A	A1S	Potri.001G213500	Potri.001G213500(AS)	POPTR_0001s22100	sp|Q5RBU7|PCP_PONAB	Lysosomal Pro-X carboxypeptidase OS=Pongo abelii GN=PRCP PE=2 SV=1	AT5G22860.1	| Symbols: | Serine carboxypeptidase S28 family protein | chr5:7639511-7642945 REVERSE LENGTH=502	LOC_Os06g43930.1	protein|OsProCP2 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed	IMGA|contig_74944_1.1	Lysosomal pro-X carboxypeptidase contig_74944 302-1588 H PREDN 20111014	GO:0006508|proteolysis	GO:0008233|peptidase activity GO:0008236|serine-type peptidase activity	GO:0005576|extracellular region GO:0009507|chloroplast
pt2_02237	A	A1S	Potri.001G213600	Potri.001G213600(AS)	POPTR_0001s22110	sp|Q9S9K4|ASPL2_ARATH	Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana GN=At1g65240 PE=1 SV=2	AT5G22850.1	| Symbols: | Eukaryotic aspartyl protease family protein | chr5:7633717-7636298 REVERSE LENGTH=493	LOC_Os01g56930.1	protein|eukaryotic aspartyl protease domain containing protein, expressed	IMGA|contig_114687_1.1	Aspartic proteinase nepenthesin-2 contig_114687 344-1597 F PREDN 20111014	GO:0006508|proteolysis	GO:0004190|aspartic-type endopeptidase activity	GO:0005576|extracellular region
pt2_02238	B	B1S	Potri.001G213700	Potri.001G213700(BS)	POPTR_0001s22120	sp|Q9SJK3|AGO5_ARATH	Protein argonaute 5 OS=Arabidopsis thaliana GN=AGO5 PE=1 SV=2	AT2G27880.1	| Symbols: AGO5 | Argonaute family protein | chr2:11871488-11876712 FORWARD LENGTH=997	LOC_Os03g58600.1	protein|PAZ domain containing protein, putative, expressed	IMGA|contig_52854_3.1	Argonaute contig_52854 8663-4003 E PREDN 20111014	GO:0008150|biological_process GO:0048441|petal development GO:0048443|stamen development GO:0048481|ovule development	GO:0003676|nucleic acid binding	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_02239	A	A1S	Potri.001G213800	Potri.001G213800(AS)	POPTR_0001s22130	sp|Q9ZT42|RHF2A_ARATH	E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis thaliana GN=RHF2A PE=2 SV=1	AT5G22000.3	| Symbols: RHF2A | RING-H2 group F2A | chr5:7277436-7279553 FORWARD LENGTH=375	LOC_Os11g36430.3	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|contig_115234_1.1	RING-H2 finger protein contig_115234 387-2040 E PREDN 20111014	GO:0006635|fatty acid beta-oxidation GO:0006914|autophagy GO:0007165|signal transduction GO:0009561|megagametogenesis GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process GO:0009755|hormone-mediated signaling pathway GO:0016558|protein import into peroxisome matrix GO:0044265|cellular macromolecule catabolic process GO:0051603|proteolysis involved in cellular protein catabolic process GO:0051726|regulation of cell cycle GO:0055046|microgametogenesis	GO:0008270|zinc ion binding	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_02240	A	A1S	Potri.001G213800	Potri.001G213800(AS)	POPTR_0001s22130	sp|Q9ZT42|RHF2A_ARATH	E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis thaliana GN=RHF2A PE=2 SV=1	AT5G22000.3	| Symbols: RHF2A | RING-H2 group F2A | chr5:7277436-7279553 FORWARD LENGTH=375	LOC_Os11g36430.3	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|contig_115234_1.1	RING-H2 finger protein contig_115234 387-2040 E PREDN 20111014	GO:0006635|fatty acid beta-oxidation GO:0006914|autophagy GO:0007165|signal transduction GO:0009561|megagametogenesis GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process GO:0009755|hormone-mediated signaling pathway GO:0016558|protein import into peroxisome matrix GO:0044265|cellular macromolecule catabolic process GO:0051603|proteolysis involved in cellular protein catabolic process GO:0051726|regulation of cell cycle GO:0055046|microgametogenesis	GO:0008270|zinc ion binding	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_02241	A	A1S	Potri.001G213900	Potri.001G213900(AS)	POPTR_0001s22140	sp|P35601|RFC1_MOUSE	Replication factor C subunit 1 OS=Mus musculus GN=Rfc1 PE=1 SV=2	AT5G22010.1	| Symbols: AtRFC1, RFC1 | replication factor C1 | chr5:7280632-7287037 REVERSE LENGTH=956	LOC_Os11g36390.1	protein|RFC1 - Putative clamp loader of PCNA, replication factor C subunit 1, expressed	NA	NA	GO:0006974|response to DNA damage stimulus GO:0007126|meiosis GO:0009737|response to abscisic acid stimulus GO:0031935|regulation of chromatin silencing GO:0051570|regulation of histone H3-K9 methylation	GO:0000166|nucleotide binding GO:0003677|DNA binding GO:0003689|DNA clamp loader activity GO:0005524|ATP binding GO:0017111|nucleoside-triphosphatase activity	GO:0005622|intracellular GO:0005634|nucleus GO:0005663|DNA replication factor C complex
pt2_02242	A	A1S	Potri.001G214400	Potri.001G214400(AS)	POPTR_0001s22150	NA	NA	NA	NA	LOC_Os04g41470.2	protein|expressed protein	NA	NA	NA	GO:0003676|nucleic acid binding GO:0004842|ubiquitin-protein ligase activity GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_02243	A	A1S	Potri.001G214500	Potri.001G214500(AS)	POPTR_0001s22160	sp|Q3T0E5|APMAP_BOVIN	Adipocyte plasma membrane-associated protein OS=Bos taurus GN=APMAP PE=2 SV=1	AT1G08470.1	| Symbols: SSL3 | strictosidine synthase-like 3 | chr1:2682262-2683977 REVERSE LENGTH=390	LOC_Os03g53950.1	protein|strictosidine synthase, putative, expressed	IMGA|Medtr5g091980.1	Strictosidine synthase chr5 39118212-39123058 E EGN_Mt100125 20111014	GO:0009058|biosynthetic process GO:0009821|alkaloid biosynthetic process	GO:0016844|strictosidine synthase activity	GO:0005774|vacuolar membrane GO:0005783|endoplasmic reticulum GO:0009507|chloroplast
pt2_02244	A	A1S	Potri.001G214600	Potri.001G214600(AS)	POPTR_0001s22170	sp|P13240|DR206_PEA	Disease resistance response protein 206 OS=Pisum sativum GN=PI206 PE=2 SV=2	AT2G21100.1	| Symbols: | Disease resistance-responsive (dirigent-like protein) family protein | chr2:9048687-9049336 REVERSE LENGTH=187	LOC_Os11g07770.1	protein|dirigent, putative, expressed	IMGA|Medtr5g096120.1	Disease resistance response protein chr5 40986916-40987485 H EGN_Mt100125 20111014	GO:0006952|defense response GO:0009807|lignan biosynthetic process	GO:0003674|molecular_function	NA
pt2_02245	A	A1S	Potri.001G214700	Potri.001G214700(AS)	POPTR_0001s22180	sp|Q9XFB0|YAB2_ARATH	Putative axial regulator YABBY 2 OS=Arabidopsis thaliana GN=YAB2 PE=2 SV=1	AT1G08465.1	| Symbols: YAB2 | Plant-specific transcription factor YABBY family protein | chr1:2676033-2679382 FORWARD LENGTH=184	LOC_Os03g44710.2	protein|YABBY domain containing protein, putative, expressed	IMGA|Medtr5g034030.1	Axial regulator YABBY chr5 14275693-14277568 H EGN_Mt100125 20111014	GO:0010158|abaxial cell fate specification	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02246	A	A1S	Potri.001G214800	Potri.001G214800(AS)	POPTR_0001s22200	sp|Q9C585|UBP8_ARATH	Ubiquitin carboxyl-terminal hydrolase 8 OS=Arabidopsis thaliana GN=UBP8 PE=1 SV=2	AT5G22030.1	| Symbols: UBP8 | ubiquitin-specific protease 8 | chr5:7290155-7296344 REVERSE LENGTH=913	LOC_Os07g06610.1	protein|ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed	IMGA|Medtr5g030360.2	Ubiquitin carboxyl-terminal hydrolase chr5 12508488-12504846 E EGN_Mt100125 20111014	GO:0006511|ubiquitin-dependent protein catabolic process	GO:0004221|ubiquitin thiolesterase activity GO:0004843|ubiquitin-specific protease activity	GO:0005634|nucleus
pt2_02247	C	C1S	Potri.001G214800	Potri.001G214800(CS)	sp|Q9C585|UBP8_ARATH	Ubiquitin carboxyl-terminal hydrolase 8 OS=Arabidopsis thaliana GN=UBP8 PE=1 SV=2	AT5G22030.1	| Symbols: UBP8 | ubiquitin-specific protease 8 | chr5:7290155-7296344 REVERSE LENGTH=913	LOC_Os07g06610.1	protein|ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed	IMGA|Medtr5g030360.2	Ubiquitin carboxyl-terminal hydrolase chr5 12508488-12504846 E EGN_Mt100125 20111014	GO:0006511|ubiquitin-dependent protein catabolic process	GO:0004221|ubiquitin thiolesterase activity GO:0004843|ubiquitin-specific protease activity	GO:0005634|nucleus
pt2_02248	A	A1S	Potri.001G214900	Potri.001G214900(AS)	POPTR_0001s22220	NA	NA	AT5G55690.1	| Symbols: | MADS-box transcription factor family protein | chr5:22548790-22549623 REVERSE LENGTH=277	LOC_Os01g67890.1	protein|OsMADS96 - MADS-box family gene with M-beta type-box, expressed	IMGA|Medtr1g115090.1	MADS-box transcription factor chr1 33315348-33313950 I EGN_Mt100125 20111014	NA	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_02249	A	A2S	Potri.001G215000	Potri.001G215000(AS) Potri.009G015600(DS)	POPTR_0001s22230	sp|Q9FX99|Y1497_ARATH	Probable receptor-like protein kinase At1g49730 OS=Arabidopsis thaliana GN=At1g49730 PE=1 SV=1	AT5G22050.2	| Symbols: | Protein kinase superfamily protein | chr5:7301467-7303209 FORWARD LENGTH=307	LOC_Os07g06570.1	protein|receptor protein kinase CRINKLY4 precursor, putative, expressed	IMGA|Medtr5g033820.1	Leucine-rich repeat receptor-like kinase chr5 14174963-14169961 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_02250	A	A1S	Potri.001G215100	Potri.001G215100(AS)	POPTR_0001s22240	sp|Q04960|DNJH_CUCSA	DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 PE=2 SV=1	AT3G44110.1	| Symbols: ATJ3, ATJ | DNAJ homologue 3 | chr3:15869115-15871059 REVERSE LENGTH=420	LOC_Os03g44620.2	protein|chaperone protein dnaJ, putative, expressed	IMGA|Medtr5g037880.1	DnaJ homolog subfamily B member chr5 16131554-16134251 F EGN_Mt100125 20111014	GO:0006457|protein folding GO:0006499|N-terminal protein myristoylation GO:0009651|response to salt stress GO:0009911|positive regulation of flower development GO:0043462|regulation of ATPase activity GO:0048573|photoperiodism, flowering	GO:0005524|ATP binding GO:0031072|heat shock protein binding GO:0051082|unfolded protein binding	GO:0005618|cell wall GO:0005730|nucleolus GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_02251	D	D1S	Potri.001G215200	Potri.001G215200(DS)	POPTR_0001s22260	sp|Q9SF32|IQD1_ARATH	Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana GN=IQD1 PE=1 SV=1	AT3G22190.2	| Symbols: IQD5 | IQ-domain 5 | chr3:7831280-7833512 REVERSE LENGTH=422	LOC_Os03g57330.3	protein|IQ calmodulin-binding motif domain containing protein, expressed	IMGA|Medtr1g095740.1	IQ domain-containing protein chr1 27488331-27490594 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0005516|calmodulin binding	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_02252	A	A1S	Potri.001G215300	Potri.001G215300(AS)	POPTR_0001s22280	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02253	A	A1S	Potri.001G215400	Potri.001G215400(AS)	POPTR_0001s22290	NA	NA	AT5G22070.1	| Symbols: | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein | chr5:7308255-7309343 FORWARD LENGTH=362	LOC_Os03g44580.2	protein|DNA binding protein, putative, expressed	IMGA|Medtr1g031060.1	hypothetical protein chr1 9080809-9081897 H EGN_Mt100125 20111014	NA	GO:0016757|transferase activity, transferring glycosyl groups	GO:0005576|extracellular region GO:0016020|membrane
pt2_02254	A	A1S	Potri.001G215500	Potri.001G215500(AS)	POPTR_0001s22300	sp|Q9C5J8|OEP80_ARATH	Outer envelope protein 80, chloroplastic OS=Arabidopsis thaliana GN=OEP80 PE=1 SV=1	AT3G44160.1	| Symbols: | Outer membrane OMP85 family protein | chr3:15889225-15891814 REVERSE LENGTH=362	LOC_Os05g43470.1	protein|outer membrane protein, OMP85 family, putative, expressed	NA	NA	GO:0006499|N-terminal protein myristoylation	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0019867|outer membrane
pt2_02255	A	A1S	Potri.001G215600	Potri.001G215600(AS)	POPTR_0001s22310	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02256	B	B2S	Potri.001G215700	Potri.001G215700(BS) Potri.009G016900(DS)	POPTR_0001s22320	sp|Q9SHS7|BSL3_ARATH	Serine/threonine-protein phosphatase BSL3 OS=Arabidopsis thaliana GN=BSL3 PE=1 SV=2	AT2G27210.1	| Symbols: BSL3 | BRI1 suppressor 1 (BSU1)-like 3 | chr2:11630188-11636182 FORWARD LENGTH=1006	LOC_Os12g42310.1	protein|serine/threonine-protein phosphatase BSL2, putative, expressed	IMGA|Medtr1g089370.1	Serine/threonine protein phosphatase chr1 24507187-24503767 H EGN_Mt100125 20111014	NA	GO:0004721|phosphoprotein phosphatase activity GO:0004722|protein serine/threonine phosphatase activity GO:0005506|iron ion binding GO:0016787|hydrolase activity GO:0030145|manganese ion binding	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_02257	A	A1S	Potri.001G215800	Potri.001G215800(AS)	POPTR_0001s22330	NA	NA	AT5G22080.1	| Symbols: | Chaperone DnaJ-domain superfamily protein | chr5:7310600-7313540 REVERSE LENGTH=246	LOC_Os03g15480.1	protein|heat shock protein DnaJ, putative, expressed	NA	NA	GO:0006457|protein folding	GO:0031072|heat shock protein binding	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_02258	A	A2S	Potri.001G215900	Potri.001G215900(AS) Potri.005G156200(DS)	POPTR_0001s22340	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02259	A	A1S	Potri.001G216000	Potri.001G216000(AS)	POPTR_0001s22350	sp|Q0V865|FAFL_ARATH	Protein FAF-like, chloroplastic OS=Arabidopsis thaliana GN=At5g22090 PE=2 SV=1	AT5G22090.2	| Symbols: | Protein of unknown function (DUF3049) | chr5:7315003-7316394 REVERSE LENGTH=463	LOC_Os03g15530.1	protein|expressed protein	IMGA|Medtr5g005770.1	hypothetical protein chr5 373314-372331 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_02260	G	G1	NA	NA	POPTR_0001s22360	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02261	A	A1S	Potri.001G216100	Potri.001G216100(AS)	POPTR_0001s22370	sp|Q84TG3|PUB23_ARATH	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana GN=PUB23 PE=1 SV=1	AT2G35930.1	| Symbols: PUB23 | plant U-box 23 | chr2:15083101-15084336 REVERSE LENGTH=411	LOC_Os02g33590.1	protein|U-box domain-containing protein, putative, expressed	IMGA|contig_67445_1.1	U-box domain-containing protein contig_67445 1727-932 E PREDN 20111014	GO:0000165|MAPK cascade GO:0002679|respiratory burst involved in defense response GO:0006612|protein targeting to membrane GO:0006944|cellular membrane fusion GO:0006952|defense response GO:0009414|response to water deprivation GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0016567|protein ubiquitination GO:0031348|negative regulation of defense response GO:0035556|intracellular signal transduction GO:0042742|defense response to bacterium GO:0043069|negative regulation of programmed cell death GO:0050832|defense response to fungus GO:0051865|protein autoubiquitination	GO:0004842|ubiquitin-protein ligase activity	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_02262	A	A1S	Potri.001G216200	Potri.001G216200(AS)	POPTR_0001s22380	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02263	C	C1S	Potri.001G216300	Potri.001G216300(CS)	sp|Q9SF15|PUB24_ARATH	E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis thaliana GN=PUB24 PE=1 SV=1	AT3G11840.1	| Symbols: PUB24 | plant U-box 24 | chr3:3736578-3738250 REVERSE LENGTH=470	LOC_Os04g58920.1	protein|U-box domain-containing protein, putative, expressed	IMGA|contig_67445_1.1	U-box domain-containing protein contig_67445 1727-932 E PREDN 20111014	GO:0000165|MAPK cascade GO:0002679|respiratory burst involved in defense response GO:0002831|regulation of response to biotic stimulus GO:0006499|N-terminal protein myristoylation GO:0006612|protein targeting to membrane GO:0006944|cellular membrane fusion GO:0006952|defense response GO:0009595|detection of biotic stimulus GO:0009627|systemic acquired resistance GO:0009693|ethylene biosynthetic process GO:0009697|salicylic acid biosynthetic process GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0016567|protein ubiquitination GO:0031348|negative regulation of defense response GO:0035556|intracellular signal transduction GO:0042742|defense response to bacterium GO:0043069|negative regulation of programmed cell death GO:0043900|regulation of multi-organism process GO:0050832|defense response to fungus GO:0051865|protein autoubiquitination	GO:0004842|ubiquitin-protein ligase activity	GO:0005737|cytoplasm
pt2_02264	A	A2S	Potri.001G216400	Potri.001G216400(AS) Potri.009G016000(DS)	POPTR_0001s22400	sp|Q9C578|RCL1_ARATH	Probable RNA 3'-terminal phosphate cyclase-like protein OS=Arabidopsis thaliana GN=At5g22100 PE=2 SV=1	AT5G22100.1	| Symbols: | RNA cyclase family protein | chr5:7329015-7330718 FORWARD LENGTH=375	LOC_Os03g61790.1	protein|RNA 3-terminal phosphate cyclase, putative, expressed	NA	NA	GO:0006396|RNA processing GO:0008150|biological_process	GO:0003824|catalytic activity GO:0003963|RNA-3'-phosphate cyclase activity	GO:0005575|cellular_component GO:0005730|nucleolus
pt2_02265	A	A1S	Potri.001G216500	Potri.001G216500(AS)	POPTR_0001s22420	sp|Q8BJM3|R3HCL_MOUSE	R3H and coiled-coil domain-containing protein 1-like OS=Mus musculus GN=R3hcc1l PE=2 SV=1	AT5G22120.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:7334612-7336755 REVERSE LENGTH=383	LOC_Os01g73470.1	protein|growth inhibition and differentiation-related protein 88, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02266	A	A1S	Potri.001G216500	Potri.001G216500(AS)	POPTR_0001s22420	sp|Q8BJM3|R3HCL_MOUSE	R3H and coiled-coil domain-containing protein 1-like OS=Mus musculus GN=R3hcc1l PE=2 SV=1	AT5G22120.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:7334612-7336755 REVERSE LENGTH=383	LOC_Os01g73470.1	protein|growth inhibition and differentiation-related protein 88, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02267	A	A1S	Potri.001G216500	Potri.001G216500(AS)	POPTR_0001s22420	sp|Q8BJM3|R3HCL_MOUSE	R3H and coiled-coil domain-containing protein 1-like OS=Mus musculus GN=R3hcc1l PE=2 SV=1	AT5G22120.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:7334612-7336755 REVERSE LENGTH=383	LOC_Os01g73470.1	protein|growth inhibition and differentiation-related protein 88, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02268	A	A1S	Potri.001G216600	Potri.001G216600(AS)	POPTR_0001s22430	sp|Q9SJ56|BLH1_ARATH	BEL1-like homeodomain protein 1 OS=Arabidopsis thaliana GN=BLH1 PE=1 SV=1	AT2G35940.3	| Symbols: BLH1 | BEL1-like homeodomain 1 | chr2:15089171-15091699 REVERSE LENGTH=680	LOC_Os11g06020.1	protein|homeobox domain containing protein, expressed	IMGA|Medtr5g018860.1	BEL1-like homeodomain protein chr5 6810765-6801813 F EGN_Mt100125 20111014	GO:0000303|response to superoxide GO:0006355|regulation of transcription, DNA-dependent GO:0006612|protein targeting to membrane GO:0009610|response to symbiotic fungus GO:0009651|response to salt stress GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009743|response to carbohydrate stimulus GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009873|ethylene mediated signaling pathway GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010197|polar nucleus fusion GO:0010201|response to continuous far red light stimulus by the high-irradiance response system GO:0010363|regulation of plant-type hypersensitive response GO:0019344|cysteine biosynthetic process GO:0048513|organ development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0042803|protein homodimerization activity GO:0043565|sequence-specific DNA binding GO:0046982|protein heterodimerization activity	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_02269	G	G1	NA	NA	POPTR_0001s22435	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02270	A	A1S	Potri.001G216900	Potri.001G216900(AS)	POPTR_0001s22450	sp|Q9XIN0|LHW_ARATH	Transcription factor LHW OS=Arabidopsis thaliana GN=LHW PE=1 SV=1	AT2G27230.2	| Symbols: LHW | transcription factor-related | chr2:11650895-11653840 FORWARD LENGTH=650	LOC_Os01g64560.1	protein|helix-loop-helix DNA-binding protein, putative, expressed	NA	NA	GO:0006342|chromatin silencing GO:0006355|regulation of transcription, DNA-dependent GO:0009855|determination of bilateral symmetry GO:0009887|organ morphogenesis GO:0009965|leaf morphogenesis GO:0010014|meristem initiation GO:0010051|xylem and phloem pattern formation GO:0010073|meristem maintenance GO:0010078|maintenance of root meristem identity GO:0010479|stele development GO:0016569|covalent chromatin modification GO:0031047|gene silencing by RNA GO:0045893|positive regulation of transcription, DNA-dependent GO:0048364|root development GO:0048439|flower morphogenesis GO:0048519|negative regulation of biological process	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0042803|protein homodimerization activity	GO:0005634|nucleus
pt2_02271	B	B1S	Potri.001G217000	Potri.001G217000(BS)	POPTR_0001s22460	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02272	D	D1S	Potri.001G217200	Potri.001G217200(DS)	POPTR_0001s22470	sp|Q9SJE8|ALMT2_ARATH	Aluminum-activated malate transporter 2 OS=Arabidopsis thaliana GN=ALMT2 PE=2 SV=2	AT1G08440.1	| Symbols: | Aluminium activated malate transporter family protein | chr1:2663027-2665343 FORWARD LENGTH=501	LOC_Os04g34010.1	protein|aluminum-activated malate transporter, putative, expressed	IMGA|Medtr5g014310.1	hypothetical protein chr5 4526352-4523171 H EGN_Mt100125 20111014	GO:0010044|response to aluminum ion	NA	GO:0005886|plasma membrane
pt2_02273	A	A1S	Potri.001G217100	Potri.001G217100(AS)	POPTR_0001s22480	NA	NA	NA	NA	LOC_Os05g24430.1	protein|retrotransposon protein, putative, Ty1-copia subclass, expressed	NA	NA	NA	NA	NA
pt2_02274	A	A3S	Potri.001G217200	Potri.001G217200(AS) Potri.001G217300(DS) Potri.001G217400(DS)	POPTR_0001s22490	sp|Q9SJE8|ALMT2_ARATH	Aluminum-activated malate transporter 2 OS=Arabidopsis thaliana GN=ALMT2 PE=2 SV=2	AT1G08440.1	| Symbols: | Aluminium activated malate transporter family protein | chr1:2663027-2665343 FORWARD LENGTH=501	LOC_Os04g34010.1	protein|aluminum-activated malate transporter, putative, expressed	IMGA|Medtr5g014310.1	hypothetical protein chr5 4526352-4523171 H EGN_Mt100125 20111014	GO:0010044|response to aluminum ion	NA	GO:0005886|plasma membrane
pt2_02275	A	A3S	Potri.001G217300	Potri.001G217300(AS) Potri.001G217400(BS) Potri.001G217200(BS)	POPTR_0001s22500	sp|Q9SJE8|ALMT2_ARATH	Aluminum-activated malate transporter 2 OS=Arabidopsis thaliana GN=ALMT2 PE=2 SV=2	AT1G08440.1	| Symbols: | Aluminium activated malate transporter family protein | chr1:2663027-2665343 FORWARD LENGTH=501	LOC_Os04g34010.1	protein|aluminum-activated malate transporter, putative, expressed	IMGA|Medtr5g014310.1	hypothetical protein chr5 4526352-4523171 H EGN_Mt100125 20111014	GO:0010044|response to aluminum ion	NA	GO:0005886|plasma membrane
pt2_02276	A	A2S	Potri.001G217400	Potri.001G217400(AS) Potri.001G217300(DS)	POPTR_0001s22510	sp|Q9SJE8|ALMT2_ARATH	Aluminum-activated malate transporter 2 OS=Arabidopsis thaliana GN=ALMT2 PE=2 SV=2	AT1G08440.1	| Symbols: | Aluminium activated malate transporter family protein | chr1:2663027-2665343 FORWARD LENGTH=501	LOC_Os04g34010.1	protein|aluminum-activated malate transporter, putative, expressed	IMGA|Medtr5g014310.1	hypothetical protein chr5 4526352-4523171 H EGN_Mt100125 20111014	GO:0010044|response to aluminum ion	NA	GO:0005886|plasma membrane
pt2_02277	A	A1S	Potri.001G217500	Potri.001G217500(AS)	POPTR_0001s22520	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02278	A	A1S	Potri.001G217600	Potri.001G217600(AS)	POPTR_0001s22530	sp|Q9MA50|PPR13_ARATH	Pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Arabidopsis thaliana GN=PDE247 PE=2 SV=1	AT1G05750.1	| Symbols: PDE247, CLB19 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:1721523-1723025 FORWARD LENGTH=500	LOC_Os02g53050.1	protein|tetratricopeptide-like helical, putative, expressed	IMGA|contig_53197_3.1	Pentatricopeptide repeat protein contig_53197 10365-8485 H PREDN 20111014	GO:0009451|RNA modification	NA	GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_02279	A	A1S	Potri.001G217700	Potri.001G217700(AS)	POPTR_0001s22540	sp|P43298|TMK1_ARATH	Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=2 SV=1	AT1G66150.1	| Symbols: TMK1 | transmembrane kinase 1 | chr1:24631503-24634415 FORWARD LENGTH=942	LOC_Os04g58910.1	protein|receptor protein kinase TMK1 precursor, putative, expressed	IMGA|Medtr5g077430.1	Kinase-like protein chr5 32055248-32058846 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0007165|signal transduction	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004675|transmembrane receptor protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005576|extracellular region GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_02280	A	A1S	Potri.001G217900	Potri.001G217900(AS)	POPTR_0001s22550	sp|Q94EJ2|HDA8_ARATH	Histone deacetylase 8 OS=Arabidopsis thaliana GN=HDA8 PE=2 SV=1	AT1G08460.1	| Symbols: HDA08, HDA8, ATHDA8 | histone deacetylase 8 | chr1:2672527-2674469 FORWARD LENGTH=377	LOC_Os05g36920.1	protein|histone deacetylase, putative, expressed	NA	NA	GO:0016575|histone deacetylation	GO:0004407|histone deacetylase activity	GO:0005634|nucleus
pt2_02281	A	A1S	Potri.001G217800	Potri.001G217800(AS)	POPTR_0001s22560	sp|Q54NS8|AIFB_DICDI	Apoptosis-inducing factor homolog B OS=Dictyostelium discoideum GN=aifB PE=3 SV=1	AT3G44190.1	| Symbols: | FAD/NAD(P)-binding oxidoreductase family protein | chr3:15902004-15903402 REVERSE LENGTH=367	LOC_Os02g05680.1	protein|apoptosis-inducing factor 2, putative, expressed	NA	NA	GO:0009407|toxin catabolic process GO:0010200|response to chitin GO:0010583|response to cyclopentenone GO:0042744|hydrogen peroxide catabolic process GO:0046482|para-aminobenzoic acid metabolic process GO:0055114|oxidation-reduction process	GO:0009055|electron carrier activity GO:0016491|oxidoreductase activity GO:0050660|flavin adenine dinucleotide binding	GO:0005737|cytoplasm GO:0005794|Golgi apparatus
pt2_02282	R	R	NA	NA	POPTR_0001s22570	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02283	A	A1S	Potri.001G218200	Potri.001G218200(AS)	POPTR_0001s22580	NA	NA	AT2G27260.1	| Symbols: | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | chr2:11669769-11670500 FORWARD LENGTH=243	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_02284	A	A1S	Potri.001G218300	Potri.001G218300(AS)	POPTR_0001s22590	NA	NA	AT2G27260.1	| Symbols: | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | chr2:11669769-11670500 FORWARD LENGTH=243	NA	NA	IMGA|contig_64962_1.1	NHL3 contig_64962 2279-1671 H PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_02285	A	A1S	Potri.001G218400	Potri.001G218400(AS)	POPTR_0001s22600	NA	NA	AT3G44380.1	| Symbols: | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | chr3:16036254-16036814 REVERSE LENGTH=186	LOC_Os08g44410.1	protein|harpin-induced protein 1 domain containing protein, expressed	NA	NA	GO:0009269|response to desiccation	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_02286	A	A2S	Potri.001G218500	Potri.001G218500(AS) Potri.001G218600(AS)	POPTR_0001s22610	sp|Q9FMR0|PER60_ARATH	Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=1 SV=1	AT5G22410.1	| Symbols: RHS18 | root hair specific 18 | chr5:7426347-7427722 FORWARD LENGTH=331	LOC_Os10g41720.1	protein|peroxidase precursor, putative, expressed	IMGA|Medtr5g017850.1	Peroxidase chr5 6345400-6343739 E EGN_Mt100125 20111014	GO:0006979|response to oxidative stress GO:0010054|trichoblast differentiation GO:0048765|root hair cell differentiation GO:0055114|oxidation-reduction process	GO:0004601|peroxidase activity GO:0020037|heme binding	GO:0005576|extracellular region
pt2_02287	A	A1S	Potri.001G218700	Potri.001G218700(AS)	POPTR_0001s22620	sp|P19950|RS141_MAIZE	40S ribosomal protein S14 OS=Zea mays PE=3 SV=1	AT3G52580.1	| Symbols: | Ribosomal protein S11 family protein | chr3:19503324-19504701 FORWARD LENGTH=150	LOC_Os02g06700.1	protein|ribosomal protein, putative, expressed	NA	NA	GO:0001510|RNA methylation GO:0006412|translation GO:0009664|plant-type cell wall organization GO:0042545|cell wall modification	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005730|nucleolus GO:0005737|cytoplasm GO:0005840|ribosome GO:0022626|cytosolic ribosome GO:0022627|cytosolic small ribosomal subunit
pt2_02288	A	A1S	Potri.001G218700	Potri.001G218700(AS)	POPTR_0001s22620	sp|P19950|RS141_MAIZE	40S ribosomal protein S14 OS=Zea mays PE=3 SV=1	AT3G52580.1	| Symbols: | Ribosomal protein S11 family protein | chr3:19503324-19504701 FORWARD LENGTH=150	LOC_Os02g06700.1	protein|ribosomal protein, putative, expressed	NA	NA	GO:0001510|RNA methylation GO:0006412|translation GO:0009664|plant-type cell wall organization GO:0042545|cell wall modification	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005730|nucleolus GO:0005737|cytoplasm GO:0005840|ribosome GO:0022626|cytosolic ribosome GO:0022627|cytosolic small ribosomal subunit
pt2_02289	B	B1S	Potri.001G218700	Potri.001G218700(BS)	POPTR_0001s22620	sp|P19950|RS141_MAIZE	40S ribosomal protein S14 OS=Zea mays PE=3 SV=1	AT3G52580.1	| Symbols: | Ribosomal protein S11 family protein | chr3:19503324-19504701 FORWARD LENGTH=150	LOC_Os02g06700.1	protein|ribosomal protein, putative, expressed	NA	NA	GO:0001510|RNA methylation GO:0006412|translation GO:0009664|plant-type cell wall organization GO:0042545|cell wall modification	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005730|nucleolus GO:0005737|cytoplasm GO:0005840|ribosome GO:0022626|cytosolic ribosome GO:0022627|cytosolic small ribosomal subunit
pt2_02290	A	A1S	Potri.001G218800	Potri.001G218800(AS)	POPTR_0001s22630	sp|Q9FMR3|NAC90_ARATH	NAC domain-containing protein 90 OS=Arabidopsis thaliana GN=NAC090 PE=2 SV=1	AT3G44350.2	| Symbols: anac061, NAC061 | NAC domain containing protein 61 | chr3:16022836-16024487 REVERSE LENGTH=241	LOC_Os05g37080.1	protein|No apical meristem protein, putative, expressed	IMGA|Medtr5g076850.1	NAC domain protein chr5 31792058-31787352 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0007275|multicellular organismal development GO:0010200|response to chitin	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02291	A	A2S	Potri.001G218900	Potri.001G218900(AS) Potri.001G218800(AA)	POPTR_0001s22640	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02292	C	C1S	Potri.001G218900	Potri.001G218900(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02293	A	A1S	Potri.001G219100	Potri.001G219100(AS)	POPTR_0001s22660	sp|Q2V9B0|MY1R1_SOLTU	Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1	AT5G04760.1	| Symbols: | Duplicated homeodomain-like superfamily protein | chr5:1373752-1374529 REVERSE LENGTH=215	LOC_Os05g37730.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr1g024440.1	Myb-like protein J chr1 7833865-7830706 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0010286|heat acclimation	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_02294	A	A1S	Potri.001G219200	Potri.001G219200(AS)	POPTR_0001s22670	sp|Q9FMR5|VA714_ARATH	Vesicle-associated membrane protein 714 OS=Arabidopsis thaliana GN=VAMP714 PE=2 SV=1	AT5G22360.1	| Symbols: ATVAMP714, VAMP714 | vesicle-associated membrane protein 714 | chr5:7404379-7405654 REVERSE LENGTH=221	LOC_Os10g06540.1	protein|vesicle-associated membrane protein, putative, expressed	IMGA|Medtr5g089370.1	Vesicle-associated membrane protein 7C chr5 37805654-37809372 F EGN_Mt100125 20111014	GO:0006810|transport GO:0009651|response to salt stress GO:0016192|vesicle-mediated transport	GO:0003674|molecular_function	GO:0005773|vacuole GO:0005794|Golgi apparatus GO:0016020|membrane GO:0016021|integral to membrane
pt2_02295	B	B1S	Potri.001G219300	Potri.001G219300(BS)	POPTR_0001s22680	sp|Q40588|ASO_TOBAC	L-ascorbate oxidase OS=Nicotiana tabacum GN=AAO PE=2 SV=1	AT5G21105.1	| Symbols: | Plant L-ascorbate oxidase | chr5:7172727-7177409 FORWARD LENGTH=588	LOC_Os06g37080.1	protein|L-ascorbate oxidase precursor, putative, expressed	IMGA|Medtr5g083360.1	Laccase chr5 34982493-34978821 E EGN_Mt100125 20111014	GO:0016126|sterol biosynthetic process GO:0046520|sphingoid biosynthetic process GO:0055114|oxidation-reduction process	GO:0005507|copper ion binding GO:0008447|L-ascorbate oxidase activity GO:0016491|oxidoreductase activity	GO:0005576|extracellular region GO:0005618|cell wall GO:0009506|plasmodesma
pt2_02296	A	A1S	Potri.001G219400	Potri.001G219400(AS)	POPTR_0001s22690	NA	NA	AT2G25570.3	| Symbols: | binding | chr2:10885881-10887842 REVERSE LENGTH=288	LOC_Os02g10820.1	protein|Sel1 repeat domain containing protein, putative, expressed	IMGA|contig_115669_1.1	Sel1 domain protein repeat-containing protein contig_115669 348-2019 H PREDN 20111014	GO:0008150|biological_process	NA	GO:0005576|extracellular region
pt2_02297	A	A2S	Potri.001G219500	Potri.001G219500(AS) Potri.009G018800(DS)	POPTR_0001s22700	sp|Q94AG2|SERK1_ARATH	Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2	AT5G21090.1	| Symbols: | Leucine-rich repeat (LRR) family protein | chr5:7164758-7166904 FORWARD LENGTH=218	LOC_Os01g59440.2	protein|BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	IMGA|Medtr5g087840.1	Somatic embryogenesis receptor kinase chr5 37094332-37091040 F EGN_Mt100125 20111014	GO:0006096|glycolysis GO:0006833|water transport GO:0006972|hyperosmotic response GO:0007030|Golgi organization GO:0007165|signal transduction GO:0009266|response to temperature stimulus GO:0009627|systemic acquired resistance GO:0009651|response to salt stress GO:0034976|response to endoplasmic reticulum stress GO:0042744|hydrogen peroxide catabolic process GO:0046686|response to cadmium ion	NA	GO:0005886|plasma membrane
pt2_02298	A	A1S	Potri.001G219700	Potri.001G219700(AS)	POPTR_0001s22710	sp|Q9ZVD5|AGO4_ARATH	Protein argonaute 4 OS=Arabidopsis thaliana GN=AGO4 PE=1 SV=2	AT2G27040.2	| Symbols: AGO4 | Argonaute family protein | chr2:11536795-11541503 REVERSE LENGTH=924	LOC_Os01g16870.3	protein|argonaute, putative, expressed	IMGA|Medtr5g087870.1	Protein argonaute 4 chr5 37098437-37107439 F EGN_Mt100125 20111014	GO:0000023|maltose metabolic process GO:0000226|microtubule cytoskeleton organization GO:0000724|double-strand break repair via homologous recombination GO:0006260|DNA replication GO:0006261|DNA-dependent DNA replication GO:0006275|regulation of DNA replication GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0006346|methylation-dependent chromatin silencing GO:0007267|cell-cell signaling GO:0008283|cell proliferation GO:0009555|pollen development GO:0009616|virus induced gene silencing GO:0009816|defense response to bacterium, incompatible interaction GO:0009855|determination of bilateral symmetry GO:0009909|regulation of flower development GO:0009965|leaf morphogenesis GO:0010014|meristem initiation GO:0010073|meristem maintenance GO:0010267|production of ta-siRNAs involved in RNA interference GO:0016246|RNA interference GO:0016444|somatic cell DNA recombination GO:0016458|gene silencing GO:0016568|chromatin modification GO:0016569|covalent chromatin modification GO:0016570|histone modification GO:0016572|histone phosphorylation GO:0019252|starch biosynthetic process GO:0030422|production of siRNA involved in RNA interference GO:0031047|gene silencing by RNA GO:0031048|chromatin silencing by small RNA GO:0034968|histone lysine methylation GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0043085|positive regulation of catalytic activity GO:0048449|floral organ formation GO:0051225|spindle assembly GO:0051567|histone H3-K9 methylation GO:0051726|regulation of cell cycle	GO:0005515|protein binding GO:0035197|siRNA binding	GO:0005634|nucleus GO:0005719|nuclear euchromatin GO:0005730|nucleolus GO:0015030|Cajal body
pt2_02299	A	A1S	Potri.001G219700	Potri.001G219700(AS)	POPTR_0001s22710	sp|Q9ZVD5|AGO4_ARATH	Protein argonaute 4 OS=Arabidopsis thaliana GN=AGO4 PE=1 SV=2	AT2G27040.2	| Symbols: AGO4 | Argonaute family protein | chr2:11536795-11541503 REVERSE LENGTH=924	LOC_Os01g16870.3	protein|argonaute, putative, expressed	IMGA|Medtr5g087870.1	Protein argonaute 4 chr5 37098437-37107439 F EGN_Mt100125 20111014	GO:0000023|maltose metabolic process GO:0000226|microtubule cytoskeleton organization GO:0000724|double-strand break repair via homologous recombination GO:0006260|DNA replication GO:0006261|DNA-dependent DNA replication GO:0006275|regulation of DNA replication GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0006346|methylation-dependent chromatin silencing GO:0007267|cell-cell signaling GO:0008283|cell proliferation GO:0009555|pollen development GO:0009616|virus induced gene silencing GO:0009816|defense response to bacterium, incompatible interaction GO:0009855|determination of bilateral symmetry GO:0009909|regulation of flower development GO:0009965|leaf morphogenesis GO:0010014|meristem initiation GO:0010073|meristem maintenance GO:0010267|production of ta-siRNAs involved in RNA interference GO:0016246|RNA interference GO:0016444|somatic cell DNA recombination GO:0016458|gene silencing GO:0016568|chromatin modification GO:0016569|covalent chromatin modification GO:0016570|histone modification GO:0016572|histone phosphorylation GO:0019252|starch biosynthetic process GO:0030422|production of siRNA involved in RNA interference GO:0031047|gene silencing by RNA GO:0031048|chromatin silencing by small RNA GO:0034968|histone lysine methylation GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0043085|positive regulation of catalytic activity GO:0048449|floral organ formation GO:0051225|spindle assembly GO:0051567|histone H3-K9 methylation GO:0051726|regulation of cell cycle	GO:0005515|protein binding GO:0035197|siRNA binding	GO:0005634|nucleus GO:0005719|nuclear euchromatin GO:0005730|nucleolus GO:0015030|Cajal body
pt2_02300	A	A1S	Potri.001G219700	Potri.001G219700(AS)	POPTR_0001s22710	sp|Q9ZVD5|AGO4_ARATH	Protein argonaute 4 OS=Arabidopsis thaliana GN=AGO4 PE=1 SV=2	AT2G27040.2	| Symbols: AGO4 | Argonaute family protein | chr2:11536795-11541503 REVERSE LENGTH=924	LOC_Os01g16870.3	protein|argonaute, putative, expressed	IMGA|Medtr5g087870.1	Protein argonaute 4 chr5 37098437-37107439 F EGN_Mt100125 20111014	GO:0000023|maltose metabolic process GO:0000226|microtubule cytoskeleton organization GO:0000724|double-strand break repair via homologous recombination GO:0006260|DNA replication GO:0006261|DNA-dependent DNA replication GO:0006275|regulation of DNA replication GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0006346|methylation-dependent chromatin silencing GO:0007267|cell-cell signaling GO:0008283|cell proliferation GO:0009555|pollen development GO:0009616|virus induced gene silencing GO:0009816|defense response to bacterium, incompatible interaction GO:0009855|determination of bilateral symmetry GO:0009909|regulation of flower development GO:0009965|leaf morphogenesis GO:0010014|meristem initiation GO:0010073|meristem maintenance GO:0010267|production of ta-siRNAs involved in RNA interference GO:0016246|RNA interference GO:0016444|somatic cell DNA recombination GO:0016458|gene silencing GO:0016568|chromatin modification GO:0016569|covalent chromatin modification GO:0016570|histone modification GO:0016572|histone phosphorylation GO:0019252|starch biosynthetic process GO:0030422|production of siRNA involved in RNA interference GO:0031047|gene silencing by RNA GO:0031048|chromatin silencing by small RNA GO:0034968|histone lysine methylation GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0043085|positive regulation of catalytic activity GO:0048449|floral organ formation GO:0051225|spindle assembly GO:0051567|histone H3-K9 methylation GO:0051726|regulation of cell cycle	GO:0005515|protein binding GO:0035197|siRNA binding	GO:0005634|nucleus GO:0005719|nuclear euchromatin GO:0005730|nucleolus GO:0015030|Cajal body
pt2_02301	A	A1S	Potri.001G219800	Potri.001G219800(AS)	POPTR_0001s22720	sp|Q39131|LAML_ARATH	Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=1	AT2G27035.1	| Symbols: ENODL20, AtENODL20 | early nodulin-like protein 20 | chr2:11535670-11536251 FORWARD LENGTH=163	LOC_Os07g02200.1	protein|plastocyanin-like domain containing protein, putative, expressed	IMGA|Medtr5g088000.1	Early nodulin-like protein chr5 37151788-37147251 I EGN_Mt100125 20111014	NA	GO:0005507|copper ion binding GO:0009055|electron carrier activity	GO:0005886|plasma membrane
pt2_02302	A	A1S	Potri.001G219900	Potri.001G219900(AS)	POPTR_0001s22725	sp|Q39131|LAML_ARATH	Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=1	AT2G27035.1	| Symbols: ENODL20, AtENODL20 | early nodulin-like protein 20 | chr2:11535670-11536251 FORWARD LENGTH=163	LOC_Os09g38540.1	protein|plastocyanin-like domain containing protein, putative, expressed	IMGA|Medtr5g088000.1	Early nodulin-like protein chr5 37151788-37147251 I EGN_Mt100125 20111014	NA	GO:0005507|copper ion binding GO:0009055|electron carrier activity	GO:0005886|plasma membrane
pt2_02303	A	A1S	Potri.001G220000	Potri.001G220000(AS)	POPTR_0001s22730	sp|Q9LRR4|R13L1_ARATH	Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana GN=RPPL1 PE=2 SV=1	AT3G14470.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr3:4857940-4861104 FORWARD LENGTH=1054	LOC_Os05g34220.1	protein|vrga1, putative, expressed	IMGA|Medtr5g040770.1	Resistance protein chr5 17512970-17510306 H EGN_Mt100125 20111014	GO:0006952|defense response GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process	GO:0005515|protein binding GO:0043531|ADP binding	GO:0005576|extracellular region
pt2_02304	A	A1S	Potri.001G220100	Potri.001G220100(AS)	POPTR_0001s22740	sp|Q6ZQ58|LARP1_MOUSE	La-related protein 1 OS=Mus musculus GN=Larp1 PE=1 SV=2	AT5G21160.1	| Symbols: | LA RNA-binding protein | chr5:7199191-7203879 REVERSE LENGTH=826	LOC_Os01g16110.2	protein|la domain containing protein, putative, expressed	IMGA|Medtr5g088200.1	La-related protein chr5 37202925-37196141 E EGN_Mt100125 20111014	GO:0008150|biological_process GO:0010150|leaf senescence GO:0048523|negative regulation of cellular process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol GO:0009507|chloroplast
pt2_02305	C	C1S	Potri.001G220100	Potri.001G220100(CS)	sp|Q6ZQ58|LARP1_MOUSE	La-related protein 1 OS=Mus musculus GN=Larp1 PE=1 SV=2	AT5G21160.1	| Symbols: | LA RNA-binding protein | chr5:7199191-7203879 REVERSE LENGTH=826	LOC_Os01g16110.2	protein|la domain containing protein, putative, expressed	IMGA|Medtr5g088200.1	La-related protein chr5 37202925-37196141 E EGN_Mt100125 20111014	GO:0008150|biological_process GO:0010150|leaf senescence GO:0048523|negative regulation of cellular process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol GO:0009507|chloroplast
pt2_02306	A	A1S	Potri.001G220300	Potri.001G220300(AS)	POPTR_0001s22750	sp|Q9LYT2|PP287_ARATH	Pentatricopeptide repeat-containing protein At3g59040 OS=Arabidopsis thaliana GN=At3g59040 PE=2 SV=2	AT3G59040.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:21821495-21824233 REVERSE LENGTH=583	LOC_Os08g09270.1	protein|pentatricopeptide, putative, expressed	IMGA|Medtr1g114300.1	Pentatricopeptide repeat-containing protein chr1 33122277-33117324 E EGN_Mt100125 20111014	GO:0006098|pentose-phosphate shunt GO:0006364|rRNA processing GO:0006399|tRNA metabolic process GO:0008150|biological_process GO:0009658|chloroplast organization	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_02307	A	A1S	Potri.001G220400	Potri.001G220400(AS)	POPTR_0001s22760	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02308	A	A1S	Potri.001G220500	Potri.001G220500(AS)	POPTR_0001s22770	NA	NA	NA	NA	LOC_Os01g60020.1	protein|NAC domain transcription factor, putative, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0007275|multicellular organismal development GO:0009407|toxin catabolic process GO:0010583|response to cyclopentenone	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_02309	A	A1S	Potri.001G220500	Potri.001G220500(AS)	POPTR_0001s22770	NA	NA	NA	NA	LOC_Os01g60020.1	protein|NAC domain transcription factor, putative, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0007275|multicellular organismal development GO:0009407|toxin catabolic process GO:0010583|response to cyclopentenone	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_02310	A	A1S	Potri.001G220500	Potri.001G220500(AS)	POPTR_0001s22770	NA	NA	NA	NA	LOC_Os01g60020.1	protein|NAC domain transcription factor, putative, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0007275|multicellular organismal development GO:0009407|toxin catabolic process GO:0010583|response to cyclopentenone	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_02311	A	A1S	Potri.001G220600	Potri.001G220600(AS)	POPTR_0001s22780	sp|Q99020|ROAA_MOUSE	Heterogeneous nuclear ribonucleoprotein A/B OS=Mus musculus GN=Hnrnpab PE=1 SV=1	AT3G56860.5	| Symbols: UBA2A | UBP1-associated protein 2A | chr3:21050708-21052144 REVERSE LENGTH=478	LOC_Os01g16090.1	protein|RNA binding protein, putative, expressed	IMGA|Medtr5g088220.1	Heterogeneous nuclear ribonucleoprotein D0 chr5 37214495-37212096 F EGN_Mt100125 20111014	GO:0006952|defense response GO:0008219|cell death GO:0009693|ethylene biosynthetic process GO:0010150|leaf senescence	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_02312	A	A1S	Potri.001G220700	Potri.001G220700(AS)	POPTR_0001s22790	sp|Q9C5Q2|AI5L3_ARATH	ABSCISIC ACID-INSENSITIVE 5-like protein 3 OS=Arabidopsis thaliana GN=DPBF4 PE=1 SV=1	AT2G41070.2	| Symbols: EEL, ATBZIP12, DPBF4 | Basic-leucine zipper (bZIP) transcription factor family protein | chr2:17131249-17132208 FORWARD LENGTH=262	LOC_Os05g41070.1	protein|bZIP transcription factor, putative, expressed	IMGA|Medtr5g088230.1	ABSCISIC ACID-INSENSITIVE 5-like protein chr5 37220804-37224366 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006950|response to stress GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_02313	A	A1S	Potri.001G220800	Potri.001G220800(AS)	POPTR_0001s22800	sp|Q84VQ1|KINB1_ARATH	SNF1-related protein kinase regulatory subunit beta-1 OS=Arabidopsis thaliana GN=KINB1 PE=1 SV=1	AT5G21170.1	| Symbols: AKINBETA1 | 5'-AMP-activated protein kinase beta-2 subunit protein | chr5:7205718-7208239 FORWARD LENGTH=283	LOC_Os05g41220.1	protein|SNF1-related protein kinase regulatory subunit beta-1, putative, expressed	IMGA|Medtr5g088270.1	SNF1-related protein kinase regulatory beta subunit chr5 37246331-37251307 F EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0009744|response to sucrose stimulus GO:0009750|response to fructose stimulus GO:0043562|cellular response to nitrogen levels	GO:0004679|AMP-activated protein kinase activity GO:0005515|protein binding	GO:0005737|cytoplasm
pt2_02314	A	A1S	Potri.001G220900	Potri.001G220900(AS)	POPTR_0001s22810	sp|Q9FSG7|TP1A_MALDO	Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1	AT1G20030.2	| Symbols: | Pathogenesis-related thaumatin superfamily protein | chr1:6945725-6947017 FORWARD LENGTH=316	LOC_Os09g36560.1	protein|thaumatin, putative, expressed	IMGA|Medtr5g022310.1	Thaumatin-like protein chr5 8540196-8542249 F EGN_Mt100125 20111014	GO:0051707|response to other organism	GO:0003674|molecular_function	GO:0005576|extracellular region GO:0031225|anchored to membrane
pt2_02315	A	A1S	Potri.001G221000	Potri.001G221000(AS)	POPTR_0001s22820	sp|A7RWD2|CIAO1_NEMVE	Probable cytosolic iron-sulfur protein assembly protein OS=Nematostella vectensis GN=v1g226592 PE=3 SV=1	AT2G26060.1	| Symbols: emb1345 | Transducin/WD40 repeat-like superfamily protein | chr2:11102400-11105127 FORWARD LENGTH=352	LOC_Os07g14830.1	protein|WD domain, G-beta repeat domain containing protein, expressed	IMGA|Medtr5g022690.1	U4/U6 small nuclear ribonucleoprotein PRP4-like protein chr5 8715534-8712947 H EGN_Mt100125 20111014	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0009086|methionine biosynthetic process GO:0009793|embryo development ending in seed dormancy GO:0010048|vernalization response GO:0048573|photoperiodism, flowering GO:0051604|protein maturation	GO:0000166|nucleotide binding	GO:0005737|cytoplasm GO:0005834|heterotrimeric G-protein complex
pt2_02316	B	B8S	Potri.001G221800	Potri.001G221800(BS) Potri.001G222100(BS) Potri.001G221100(BS) Potri.001G221200(BS) Potri.001G221700(BS) Potri.001G221400(BS) Potri.001G221900(DS) Potri.001G221500(DS)	POPTR_0001s22830	sp|P50694|TLP_PRUAV	Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1	AT1G75800.1	| Symbols: | Pathogenesis-related thaumatin superfamily protein | chr1:28458889-28460447 FORWARD LENGTH=330	LOC_Os10g05660.1	protein|thaumatin, putative, expressed	IMGA|Medtr5g022310.1	Thaumatin-like protein chr5 8540196-8542249 F EGN_Mt100125 20111014	GO:0051707|response to other organism	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_02317	C	C1S	Potri.001G221000	Potri.001G221000(CS)	sp|A7RWD2|CIAO1_NEMVE	Probable cytosolic iron-sulfur protein assembly protein OS=Nematostella vectensis GN=v1g226592 PE=3 SV=1	AT2G26060.1	| Symbols: emb1345 | Transducin/WD40 repeat-like superfamily protein | chr2:11102400-11105127 FORWARD LENGTH=352	LOC_Os07g14830.1	protein|WD domain, G-beta repeat domain containing protein, expressed	IMGA|Medtr5g022690.1	U4/U6 small nuclear ribonucleoprotein PRP4-like protein chr5 8715534-8712947 H EGN_Mt100125 20111014	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0009086|methionine biosynthetic process GO:0009793|embryo development ending in seed dormancy GO:0010048|vernalization response GO:0048573|photoperiodism, flowering GO:0051604|protein maturation	GO:0000166|nucleotide binding	GO:0005737|cytoplasm GO:0005834|heterotrimeric G-protein complex
pt2_02318	A	A10S	Potri.001G221200	Potri.001G221200(AS) Potri.001G221800(BS) Potri.001G222100(BS) Potri.001G221900(BS) Potri.001G221100(BS) Potri.001G221500(BS) Potri.001G221300(DS) Potri.001G222000(DS) Potri.001G221700(DS) Potri.001G221400(DS)	POPTR_0001s22850	sp|P50694|TLP_PRUAV	Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1	AT1G75800.1	| Symbols: | Pathogenesis-related thaumatin superfamily protein | chr1:28458889-28460447 FORWARD LENGTH=330	LOC_Os10g05660.1	protein|thaumatin, putative, expressed	IMGA|Medtr5g022310.1	Thaumatin-like protein chr5 8540196-8542249 F EGN_Mt100125 20111014	GO:0051707|response to other organism	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_02319	A	A5S	Potri.001G221300	Potri.001G221300(AS) Potri.001G221500(BS) Potri.001G221400(BS) Potri.001G222100(DS) Potri.001G222000(DS)	POPTR_0001s22860	sp|P83332|TLP1_PRUPE	Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1	AT1G20030.1	| Symbols: | Pathogenesis-related thaumatin superfamily protein | chr1:6945850-6947017 FORWARD LENGTH=299	LOC_Os10g05660.1	protein|thaumatin, putative, expressed	IMGA|Medtr5g022310.1	Thaumatin-like protein chr5 8540196-8542249 F EGN_Mt100125 20111014	GO:0051707|response to other organism	GO:0003674|molecular_function	GO:0005576|extracellular region GO:0031225|anchored to membrane
pt2_02320	A	A8S	Potri.001G221400	Potri.001G221400(AS) Potri.001G221300(BS) Potri.001G221800(BS) Potri.001G221900(BS) Potri.001G221100(BS) Potri.001G221200(BS) Potri.001G221500(BS) Potri.001G221700(BS)	POPTR_0001s22870	sp|O80327|TLP1_PYRPY	Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1 PE=1 SV=1	AT1G75800.1	| Symbols: | Pathogenesis-related thaumatin superfamily protein | chr1:28458889-28460447 FORWARD LENGTH=330	LOC_Os10g05660.1	protein|thaumatin, putative, expressed	IMGA|Medtr5g022310.1	Thaumatin-like protein chr5 8540196-8542249 F EGN_Mt100125 20111014	GO:0051707|response to other organism	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_02321	A	A5S	Potri.001G221500	Potri.001G221500(AS) Potri.001G221800(BS) Potri.001G221900(BS) Potri.001G221200(BS) Potri.001G222100(DS)	POPTR_0001s22880	sp|Q9FSG7|TP1A_MALDO	Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1	AT1G75800.1	| Symbols: | Pathogenesis-related thaumatin superfamily protein | chr1:28458889-28460447 FORWARD LENGTH=330	LOC_Os07g23470.1	protein|thaumatin, putative, expressed	IMGA|Medtr5g022310.1	Thaumatin-like protein chr5 8540196-8542249 F EGN_Mt100125 20111014	GO:0051707|response to other organism	GO:0003674|molecular_function	GO:0005576|extracellular region GO:0031225|anchored to membrane
pt2_02322	A	A1S	Potri.001G221600	Potri.001G221600(AS)	POPTR_0001s22890	sp|O80327|TLP1_PYRPY	Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1 PE=1 SV=1	AT1G75030.1	| Symbols: ATLP-3, TLP-3 | thaumatin-like protein 3 | chr1:28174418-28175255 FORWARD LENGTH=246	LOC_Os07g23470.1	protein|thaumatin, putative, expressed	IMGA|Medtr5g068690.1	Thaumatin-like protein chr5 28103617-28107189 H EGN_Mt100125 20111014	GO:0051707|response to other organism	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_02323	A	A1S	Potri.001G221700	Potri.001G221700(AS)	POPTR_0001s22900	sp|P83332|TLP1_PRUPE	Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1	AT1G75800.1	| Symbols: | Pathogenesis-related thaumatin superfamily protein | chr1:28458889-28460447 FORWARD LENGTH=330	LOC_Os07g23470.1	protein|thaumatin, putative, expressed	IMGA|Medtr5g022310.1	Thaumatin-like protein chr5 8540196-8542249 F EGN_Mt100125 20111014	GO:0051707|response to other organism	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_02324	A	A5S	Potri.001G221800	Potri.001G221800(AS) Potri.001G221900(BS) Potri.001G221200(BS) Potri.001G221500(BS) Potri.001G222100(DS)	POPTR_0001s22920	sp|P50694|TLP_PRUAV	Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1	AT1G75800.1	| Symbols: | Pathogenesis-related thaumatin superfamily protein | chr1:28458889-28460447 FORWARD LENGTH=330	LOC_Os10g05660.1	protein|thaumatin, putative, expressed	IMGA|Medtr5g022310.1	Thaumatin-like protein chr5 8540196-8542249 F EGN_Mt100125 20111014	GO:0051707|response to other organism	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_02325	B	B5S	Potri.001G221900	Potri.001G221900(BS) Potri.001G221800(DS) Potri.001G221200(DS) Potri.001G221500(DS) Potri.001G221400(DS)	POPTR_0001s22930	sp|Q9FSG7|TP1A_MALDO	Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1	AT1G75800.1	| Symbols: | Pathogenesis-related thaumatin superfamily protein | chr1:28458889-28460447 FORWARD LENGTH=330	LOC_Os10g05660.1	protein|thaumatin, putative, expressed	IMGA|Medtr5g022310.1	Thaumatin-like protein chr5 8540196-8542249 F EGN_Mt100125 20111014	GO:0051707|response to other organism	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_02326	A	A8S	Potri.001G221800	Potri.001G221800(AS) Potri.001G221900(AS) Potri.001G221500(AS) Potri.001G221300(BS) Potri.001G221100(BS) Potri.001G221200(BS) Potri.001G221700(BS) Potri.001G221400(BS)	POPTR_0001s22950	sp|P50694|TLP_PRUAV	Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1	AT1G75800.1	| Symbols: | Pathogenesis-related thaumatin superfamily protein | chr1:28458889-28460447 FORWARD LENGTH=330	LOC_Os10g05660.1	protein|thaumatin, putative, expressed	IMGA|Medtr5g022310.1	Thaumatin-like protein chr5 8540196-8542249 F EGN_Mt100125 20111014	GO:0051707|response to other organism	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_02327	A	A3S	Potri.001G222000	Potri.001G222000(AS) Potri.001G222100(BS) Potri.001G221200(DS)	POPTR_0001s22950	sp|O80327|TLP1_PYRPY	Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1 PE=1 SV=1	AT1G19320.1	| Symbols: | Pathogenesis-related thaumatin superfamily protein | chr1:6679327-6680178 FORWARD LENGTH=247	LOC_Os07g23470.1	protein|thaumatin, putative, expressed	IMGA|Medtr5g022310.1	Thaumatin-like protein chr5 8540196-8542249 F EGN_Mt100125 20111014	GO:0051707|response to other organism	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_02328	A	A1S	Potri.001G222100	Potri.001G222100(AS)	POPTR_0001s22960	sp|O80327|TLP1_PYRPY	Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1 PE=1 SV=1	AT1G75800.1	| Symbols: | Pathogenesis-related thaumatin superfamily protein | chr1:28458889-28460447 FORWARD LENGTH=330	LOC_Os10g05660.1	protein|thaumatin, putative, expressed	IMGA|Medtr5g022310.1	Thaumatin-like protein chr5 8540196-8542249 F EGN_Mt100125 20111014	GO:0051707|response to other organism	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_02329	A	A8S	Potri.001G221800	Potri.001G221800(AS) Potri.001G221900(AS) Potri.001G221100(AS) Potri.001G221200(AS) Potri.001G222100(BS) Potri.001G221500(BS) Potri.001G221700(BS) Potri.001G221400(BS)	POPTR_0001s22960	sp|P50694|TLP_PRUAV	Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1	AT1G75800.1	| Symbols: | Pathogenesis-related thaumatin superfamily protein | chr1:28458889-28460447 FORWARD LENGTH=330	LOC_Os10g05660.1	protein|thaumatin, putative, expressed	IMGA|Medtr5g022310.1	Thaumatin-like protein chr5 8540196-8542249 F EGN_Mt100125 20111014	GO:0051707|response to other organism	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_02330	C	C2S	Potri.011G020000	Potri.011G020000(CS) Potri.001G411200(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02331	A	A2S	Potri.001G222200	Potri.001G222200(AS) Potri.009G021500(BS)	POPTR_0001s22980	sp|P93171|CALM_HELAN	Calmodulin OS=Helianthus annuus GN=CAM PE=2 SV=3	AT2G27030.3	| Symbols: CAM5 | calmodulin 5 | chr2:11532069-11534176 FORWARD LENGTH=181	LOC_Os01g17190.1	protein|OsCam3 - Calmodulin, expressed	IMGA|Medtr5g088320.1	Calmodulin chr5 37281091-37277966 F EGN_Mt100125 20111014	NA	GO:0005509|calcium ion binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005774|vacuolar membrane GO:0005886|plasma membrane
pt2_02332	A	A1S	Potri.001G222300	Potri.001G222300(AS)	POPTR_0001s23000	sp|Q9ZVE0|ORN_ARATH	Oligoribonuclease OS=Arabidopsis thaliana GN=At2g26970 PE=2 SV=2	AT2G26970.1	| Symbols: | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr2:11509908-11511903 REVERSE LENGTH=222	LOC_Os02g26660.2	protein|exonuclease, putative, expressed	IMGA|Medtr5g088330.1	Oligoribonuclease chr5 37283827-37298839 E EGN_Mt100125 20111014	NA	GO:0003676|nucleic acid binding GO:0004527|exonuclease activity	GO:0005622|intracellular
pt2_02333	A	A1S	Potri.001G222400	Potri.001G222400(AS)	POPTR_0001s23010	NA	NA	AT4G15010.2	| Symbols: | Mitochondrial substrate carrier family protein | chr4:8573125-8574864 REVERSE LENGTH=378	LOC_Os04g44540.2	protein|mitochondrial carrier protein, putative, expressed	NA	NA	GO:0006810|transport GO:0006839|mitochondrial transport	NA	GO:0005739|mitochondrion GO:0005743|mitochondrial inner membrane
pt2_02334	A	A2S	Potri.001G222500	Potri.001G222500(AS) Potri.009G021200(DS)	POPTR_0001s23020	sp|Q9FJD0|VP26A_ARATH	Vacuolar protein sorting-associated protein 26A OS=Arabidopsis thaliana GN=VPS26A PE=2 SV=1	AT5G53530.1	| Symbols: VPS26A | vacuolar protein sorting 26A | chr5:21746275-21748156 REVERSE LENGTH=302	LOC_Os11g41130.2	protein|vacuolar protein sorting-associated protein 26, putative, expressed	NA	NA	GO:0000902|cell morphogenesis GO:0006623|protein targeting to vacuole GO:0006886|intracellular protein transport GO:0006944|cellular membrane fusion GO:0007034|vacuolar transport GO:0008333|endosome to lysosome transport GO:0016049|cell growth GO:0016192|vesicle-mediated transport GO:0016197|endosomal transport GO:0042147|retrograde transport, endosome to Golgi GO:0048193|Golgi vesicle transport	GO:0003674|molecular_function	GO:0005771|multivesicular body GO:0009507|chloroplast GO:0016020|membrane GO:0030904|retromer complex GO:0043231|intracellular membrane-bounded organelle
pt2_02335	A	A1S	Potri.001G222600	Potri.001G222600(AS)	POPTR_0001s23030	sp|Q2V452|CIPK3_ARATH	CBL-interacting serine/threonine-protein kinase 3 OS=Arabidopsis thaliana GN=CIPK3 PE=1 SV=2	AT2G26980.3	| Symbols: CIPK3 | CBL-interacting protein kinase 3 | chr2:11515234-11518205 REVERSE LENGTH=441	LOC_Os12g03810.2	protein|CAMK_KIN1/SNF1/Nim1_like.37 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	IMGA|Medtr5g088350.2	CBL-interacting protein kinase chr5 37310696-37305753 F EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0007165|signal transduction GO:0009628|response to abiotic stimulus GO:0009735|response to cytokinin stimulus GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009845|seed germination	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005886|plasma membrane
pt2_02336	A	A1S	Potri.001G222600	Potri.001G222600(AS)	POPTR_0001s23030	sp|Q2V452|CIPK3_ARATH	CBL-interacting serine/threonine-protein kinase 3 OS=Arabidopsis thaliana GN=CIPK3 PE=1 SV=2	AT2G26980.3	| Symbols: CIPK3 | CBL-interacting protein kinase 3 | chr2:11515234-11518205 REVERSE LENGTH=441	LOC_Os12g03810.2	protein|CAMK_KIN1/SNF1/Nim1_like.37 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	IMGA|Medtr5g088350.2	CBL-interacting protein kinase chr5 37310696-37305753 F EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0007165|signal transduction GO:0009628|response to abiotic stimulus GO:0009735|response to cytokinin stimulus GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009845|seed germination	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005886|plasma membrane
pt2_02337	A	A1S	Potri.001G222600	Potri.001G222600(AS)	POPTR_0001s23030	sp|Q2V452|CIPK3_ARATH	CBL-interacting serine/threonine-protein kinase 3 OS=Arabidopsis thaliana GN=CIPK3 PE=1 SV=2	AT2G26980.3	| Symbols: CIPK3 | CBL-interacting protein kinase 3 | chr2:11515234-11518205 REVERSE LENGTH=441	LOC_Os12g03810.2	protein|CAMK_KIN1/SNF1/Nim1_like.37 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	IMGA|Medtr5g088350.2	CBL-interacting protein kinase chr5 37310696-37305753 F EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0007165|signal transduction GO:0009628|response to abiotic stimulus GO:0009735|response to cytokinin stimulus GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009845|seed germination	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005886|plasma membrane
pt2_02338	A	A1S	Potri.001G222700	Potri.001G222700(AS)	POPTR_0001s23040	sp|Q8W207|CSN2_ARATH	COP9 signalosome complex subunit 2 OS=Arabidopsis thaliana GN=CSN2 PE=1 SV=1	AT2G26990.1	| Symbols: FUS12, ATCSN2, COP12, CSN2 | proteasome family protein | chr2:11519684-11522412 REVERSE LENGTH=439	LOC_Os01g17180.1	protein|proteasome subunit, putative, expressed	IMGA|Medtr1g009010.1	26S proteasome non-ATPase regulatory subunit chr1 1761773-1758074 F EGN_Mt100125 20111014	GO:0009640|photomorphogenesis GO:0010388|cullin deneddylation GO:0030163|protein catabolic process	GO:0005515|protein binding	GO:0005634|nucleus GO:0005829|cytosol GO:0008180|signalosome
pt2_02339	R	R	NA	NA	POPTR_0001s23050	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02340	A	A8S	Potri.001G223900	Potri.001G223900(AS) Potri.001G224000(AS) Potri.001G222800(AS) Potri.001G223800(AS) Potri.001G223600(AS) Potri.001G223700(AS) Potri.002G219600(BS) Potri.001G223500(BS)	POPTR_0001s23060	sp|Q7XKV4|BGL12_ORYSJ	Beta-glucosidase 12 OS=Oryza sativa subsp. japonica GN=BGLU12 PE=2 SV=2	AT2G44480.1	| Symbols: BGLU17 | beta glucosidase 17 | chr2:18359780-18363001 FORWARD LENGTH=517	LOC_Os04g39880.1	protein|Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed	IMGA|Medtr5g071520.1	Beta-glucosidase D7 chr5 29396807-29401668 H EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0043169|cation binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02341	A	A9S	Potri.001G223200	Potri.001G223200(AS) Potri.001G223400(AS) Potri.001G222900(AS) Potri.001G223300(AS) Potri.019G010800(BS) Potri.004G109200(BS) Potri.T018600(BS) Potri.T019200(BS) Potri.T018000(BS)	POPTR_0001s23070	sp|Q7F9K4|BGL10_ORYSJ	Beta-glucosidase 10 OS=Oryza sativa subsp. japonica GN=BGLU10 PE=2 SV=1	AT5G24550.1	| Symbols: BGLU32 | beta glucosidase 32 | chr5:8392059-8395302 REVERSE LENGTH=534	LOC_Os04g39840.2	protein|Os4bglu10 - beta-glucosidase homologue, similar to Os4Bglu12 exoglucanase/beta-glucosidase, expressed	IMGA|Medtr5g071520.1	Beta-glucosidase D7 chr5 29396807-29401668 H EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0051707|response to other organism	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0043169|cation binding	GO:0005576|extracellular region
pt2_02342	G	G1	NA	NA	POPTR_0001s23090	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02343	A	A8S	Potri.001G224000	Potri.001G224000(AS) Potri.001G222800(AS) Potri.001G223600(AS) Potri.001G223500(AS) Potri.001G223700(AS) Potri.001G223900(BS) Potri.002G219600(BS) Potri.001G223800(BS)	POPTR_0001s23110	sp|Q7XKV4|BGL12_ORYSJ	Beta-glucosidase 12 OS=Oryza sativa subsp. japonica GN=BGLU12 PE=2 SV=2	AT2G44480.1	| Symbols: BGLU17 | beta glucosidase 17 | chr2:18359780-18363001 FORWARD LENGTH=517	LOC_Os04g39880.1	protein|Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed	IMGA|Medtr5g071520.1	Beta-glucosidase D7 chr5 29396807-29401668 H EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0043169|cation binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02344	A	A8S	Potri.001G224000	Potri.001G224000(AS) Potri.001G223800(AS) Potri.001G223500(AS) Potri.001G223900(BS) Potri.001G222800(BS) Potri.002G219600(BS) Potri.001G223600(BS) Potri.001G223700(BS)	POPTR_0001s23120	sp|Q7XKV4|BGL12_ORYSJ	Beta-glucosidase 12 OS=Oryza sativa subsp. japonica GN=BGLU12 PE=2 SV=2	AT2G44480.1	| Symbols: BGLU17 | beta glucosidase 17 | chr2:18359780-18363001 FORWARD LENGTH=517	LOC_Os04g39880.1	protein|Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed	IMGA|Medtr5g071520.1	Beta-glucosidase D7 chr5 29396807-29401668 H EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0043169|cation binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02345	A	A1S	Potri.001G223900	Potri.001G223900(AS)	POPTR_0001s23130	sp|Q7XKV4|BGL12_ORYSJ	Beta-glucosidase 12 OS=Oryza sativa subsp. japonica GN=BGLU12 PE=2 SV=2	AT2G44480.1	| Symbols: BGLU17 | beta glucosidase 17 | chr2:18359780-18363001 FORWARD LENGTH=517	LOC_Os04g39880.1	protein|Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed	IMGA|Medtr5g071520.1	Beta-glucosidase D7 chr5 29396807-29401668 H EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0043169|cation binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02346	A	A2S	Potri.001G224100	Potri.001G224100(AS) Potri.009G020800(DS)	POPTR_0001s23140	sp|O23715|PSA3_ARATH	Proteasome subunit alpha type-3 OS=Arabidopsis thaliana GN=PAG1 PE=1 SV=2	AT2G27020.1	| Symbols: PAG1 | 20S proteasome alpha subunit G1 | chr2:11528515-11530858 REVERSE LENGTH=249	LOC_Os01g59600.2	protein|peptidase, T1 family, putative, expressed	IMGA|Medtr5g016590.1	Proteasome subunit alpha type chr5 5705647-5708295 F EGN_Mt100125 20111014	GO:0006094|gluconeogenesis GO:0006096|glycolysis GO:0006511|ubiquitin-dependent protein catabolic process GO:0006833|water transport GO:0006972|hyperosmotic response GO:0007030|Golgi organization GO:0009266|response to temperature stimulus GO:0009409|response to cold GO:0009651|response to salt stress GO:0009853|photorespiration GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0043248|proteasome assembly GO:0046686|response to cadmium ion GO:0051603|proteolysis involved in cellular protein catabolic process GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	GO:0004175|endopeptidase activity GO:0004298|threonine-type endopeptidase activity GO:0008233|peptidase activity	GO:0000502|proteasome complex GO:0005634|nucleus GO:0005737|cytoplasm GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005829|cytosol GO:0005839|proteasome core complex GO:0019773|proteasome core complex, alpha-subunit complex GO:0048046|apoplast
pt2_02347	B	B1S	Potri.001G224200	Potri.001G224200(BS)	POPTR_0001s23150	sp|Q9FGY4|FB341_ARATH	F-box protein At5g49610 OS=Arabidopsis thaliana GN=At5g49610 PE=1 SV=1	AT5G49610.1	| Symbols: | F-box family protein | chr5:20131448-20132527 REVERSE LENGTH=359	LOC_Os12g06740.2	protein|OsFBX440 - F-box domain containing protein, expressed	IMGA|Medtr5g022900.1	F-box protein chr5 8816522-8818311 I EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_02348	A	A1S	Potri.001G224300	Potri.001G224300(AS)	POPTR_0001s23155	NA	NA	NA	NA	NA	NA	IMGA|Medtr5g027330.1	F-box family protein chr5 11106233-11107743 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_02349	A	A1S	Potri.001G224400	Potri.001G224400(AS)	POPTR_0001s23160	sp|B7K911|UREF_CYAP7	Urease accessory protein UreF OS=Cyanothece sp. (strain PCC 7424) GN=ureF PE=3 SV=1	AT1G21840.1	| Symbols: UREF | urease accessory protein F | chr1:7666859-7667581 FORWARD LENGTH=240	LOC_Os02g07150.3	protein|urease accessory protein F, putative, expressed	IMGA|Medtr5g088570.2	Urease accessory protein UreF chr5 37399429-37402002 F EGN_Mt100125 20111014	GO:0006661|phosphatidylinositol biosynthetic process GO:0006807|nitrogen compound metabolic process GO:0048554|positive regulation of metalloenzyme activity	GO:0016151|nickel cation binding	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_02350	G	G1	NA	NA	POPTR_0001s23170	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02351	A	A1S	Potri.001G224600	Potri.001G224600(AS)	POPTR_0001s23180	NA	NA	AT5G56200.1	| Symbols: | C2H2 type zinc finger transcription factor family | chr5:22747768-22749249 FORWARD LENGTH=493	NA	NA	IMGA|Medtr1g106730.1	Zinc finger protein chr1 31397508-31398593 F EGN_Mt100125 20111014	NA	GO:0003676|nucleic acid binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_02352	A	A1S	Potri.001G224700	Potri.001G224700(AS)	POPTR_0001s23190	sp|Q9SI20|EF1D2_ARATH	Elongation factor 1-delta 2 OS=Arabidopsis thaliana GN=At2g18110 PE=2 SV=1	AT2G18110.1	| Symbols: | Translation elongation factor EF1B/ribosomal protein S6 family protein | chr2:7872636-7873713 FORWARD LENGTH=231	LOC_Os07g46750.1	protein|elongation factor protein, putative, expressed	IMGA|Medtr5g088660.1	Elongation factor 1-beta chr5 37427616-37430824 F EGN_Mt100125 20111014	GO:0006414|translational elongation GO:0009407|toxin catabolic process GO:0010583|response to cyclopentenone	GO:0003746|translation elongation factor activity	GO:0005853|eukaryotic translation elongation factor 1 complex GO:0005886|plasma membrane
pt2_02353	C	C1A	Potri.001G224900	Potri.001G224900(CA)	sp|P44747|TYRPB_HAEIN	Tyrosine-specific transport protein 2 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=tyrP-B PE=3 SV=1	AT5G19500.1	| Symbols: | Tryptophan/tyrosine permease | chr5:6579019-6581699 FORWARD LENGTH=505	LOC_Os07g46780.2	protein|tyrosine-specific transport protein, putative, expressed	IMGA|Medtr5g088730.1	Tyrosine-specific transport protein chr5 37482230-37477000 H EGN_Mt100125 20111014	GO:0006863|purine nucleobase transport GO:0006865|amino acid transport	GO:0005275|amine transmembrane transporter activity	GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009706|chloroplast inner membrane GO:0016020|membrane
pt2_02354	A	A1S	Potri.001G224900	Potri.001G224900(AS)	POPTR_0001s23210	sp|P44747|TYRPB_HAEIN	Tyrosine-specific transport protein 2 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=tyrP-B PE=3 SV=1	AT5G19500.1	| Symbols: | Tryptophan/tyrosine permease | chr5:6579019-6581699 FORWARD LENGTH=505	LOC_Os07g46780.2	protein|tyrosine-specific transport protein, putative, expressed	IMGA|Medtr5g088730.1	Tyrosine-specific transport protein chr5 37482230-37477000 H EGN_Mt100125 20111014	GO:0006863|purine nucleobase transport GO:0006865|amino acid transport	GO:0005275|amine transmembrane transporter activity	GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009706|chloroplast inner membrane GO:0016020|membrane
pt2_02355	C	C1S	Potri.001G225000	Potri.001G225000(CS)	sp|P0AAD5|TYRP_SHIFL	Tyrosine-specific transport protein OS=Shigella flexneri GN=tyrP PE=3 SV=1	AT5G19500.1	| Symbols: | Tryptophan/tyrosine permease | chr5:6579019-6581699 FORWARD LENGTH=505	LOC_Os07g46780.1	protein|tyrosine-specific transport protein, putative, expressed	IMGA|Medtr5g088730.1	Tyrosine-specific transport protein chr5 37482230-37477000 H EGN_Mt100125 20111014	GO:0006863|purine nucleobase transport GO:0006865|amino acid transport	GO:0005275|amine transmembrane transporter activity	GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009706|chloroplast inner membrane GO:0016020|membrane
pt2_02356	A	A1S	Potri.001G225100	Potri.001G225100(AS)	POPTR_0001s23230	sp|P93841|ISPE_SOLLC	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic/chromoplastic (Fragment) OS=Solanum lycopersicum GN=ISPE PE=1 SV=1	AT2G26930.1	| Symbols: ATCDPMEK, PDE277, ISPE, CDPMEK | 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase | chr2:11491829-11494229 REVERSE LENGTH=383	LOC_Os01g58790.1	protein|GHMP kinases ATP-binding protein, putative, expressed	NA	NA	GO:0006783|heme biosynthetic process GO:0009637|response to blue light GO:0009644|response to high light intensity GO:0009744|response to sucrose stimulus GO:0010114|response to red light GO:0010155|regulation of proton transport GO:0010218|response to far red light GO:0016114|terpenoid biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway	GO:0005524|ATP binding GO:0050515|4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity	GO:0009507|chloroplast
pt2_02357	A	A2S	Potri.001G225200	Potri.001G225200(AS) Potri.009G021900(DS)	POPTR_0001s23240	NA	NA	AT2G26920.1	| Symbols: | Ubiquitin-associated/translation elongation factor EF1B protein | chr2:11489648-11491588 FORWARD LENGTH=646	LOC_Os05g33850.1	protein|UBA/TS-N domain containing protein, expressed	IMGA|Medtr5g088750.1	hypothetical protein chr5 37495868-37490284 E EGN_Mt100125 20111014	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_02358	A	A1S	Potri.001G225300	Potri.001G225300(AS)	POPTR_0001s23250	sp|Q3UJZ3|ARMC7_MOUSE	Armadillo repeat-containing protein 7 OS=Mus musculus GN=Armc7 PE=2 SV=2	AT5G37290.1	| Symbols: | ARM repeat superfamily protein | chr5:14762730-14764097 FORWARD LENGTH=180	LOC_Os11g34364.1	protein|armadillo/beta-catenin-like repeat containing protein, expressed	IMGA|Medtr5g077040.1	Armadillo repeat-containing protein chr5 31864250-31868562 F EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005634|nucleus
pt2_02359	B	B1S	Potri.001G225400	Potri.001G225400(BS)	POPTR_0001s23260	sp|A0JPP1|NC2A_RAT	Dr1-associated corepressor OS=Rattus norvegicus GN=Drap1 PE=2 SV=1	AT3G12480.1	| Symbols: NF-YC11 | nuclear factor Y, subunit C11 | chr3:3958065-3960278 FORWARD LENGTH=293	LOC_Os11g34200.1	protein|histone-like transcription factor and archaeal histone, putative, expressed	IMGA|Medtr5g088760.1	Dr1-associated corepressor chr5 37502840-37503591 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005622|intracellular GO:0005634|nucleus GO:0005829|cytosol
pt2_02360	A	A1S	Potri.001G225500	Potri.001G225500(AS)	POPTR_0001s23270	sp|Q9FMN4|TCLOT_ARATH	Thioredoxin-like protein Clot OS=Arabidopsis thaliana GN=At5g42850 PE=2 SV=1	AT5G42850.2	| Symbols: | Thioredoxin superfamily protein | chr5:17182072-17182568 REVERSE LENGTH=134	LOC_Os06g21550.1	protein|thioredoxin domain-containing protein 17, putative, expressed	NA	NA	GO:0045454|cell redox homeostasis	NA	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_02361	A	A1S	Potri.001G225600	Potri.001G225600(AS)	POPTR_0001s23280	sp|Q9FQ19|SCC13_ARATH	Sister chromatid cohesion 1 protein 3 OS=Arabidopsis thaliana GN=SYN3 PE=2 SV=2	AT3G59550.1	| Symbols: SYN3, ATRAD21.2, ATSYN3 | Rad21/Rec8-like family protein | chr3:21997262-22000496 FORWARD LENGTH=693	LOC_Os08g16610.1	protein|Rad21 / Rec8 like protein, putative, expressed	IMGA|Medtr5g081270.1	Sister chromatid cohesion 1 protein chr5 33806067-33803418 H EGN_Mt100125 20111014	GO:0000280|nuclear division GO:0006261|DNA-dependent DNA replication GO:0006275|regulation of DNA replication GO:0007067|mitosis GO:0009555|pollen development GO:0009561|megagametogenesis GO:0010389|regulation of G2/M transition of mitotic cell cycle GO:0042023|DNA endoreduplication GO:0051225|spindle assembly	GO:0003674|molecular_function	GO:0000228|nuclear chromosome GO:0000798|nuclear cohesin complex GO:0005634|nucleus GO:0005730|nucleolus
pt2_02362	A	A1S	Potri.001G225700	Potri.001G225700(AS)	POPTR_0001s23290	sp|Q9ZU38|RPIA_ARATH	Probable ribose-5-phosphate isomerase OS=Arabidopsis thaliana GN=At2g01290 PE=2 SV=1	AT2G01290.1	| Symbols: RPI2 | ribose-5-phosphate isomerase 2 | chr2:149192-149989 REVERSE LENGTH=265	LOC_Os07g08030.1	protein|ribose-5-phosphate isomerase A, putative, expressed	NA	NA	GO:0008219|cell death GO:0009052|pentose-phosphate shunt, non-oxidative branch GO:0010228|vegetative to reproductive phase transition of meristem	GO:0004751|ribose-5-phosphate isomerase activity	GO:0005737|cytoplasm
pt2_02363	A	A2S	Potri.001G225800	Potri.001G225800(AS) Potri.009G022300(DS)	POPTR_0001s23300	sp|Q06445|CYTI_VIGUN	Cysteine proteinase inhibitor OS=Vigna unguiculata PE=3 SV=1	AT3G12490.1	| Symbols: ATCYSB, ATCYS6, CYSB | cystatin B | chr3:3960523-3961777 REVERSE LENGTH=201	LOC_Os01g16430.1	protein|cysteine proteinase inhibitor precursor protein, putative, expressed	IMGA|Medtr5g088770.1	Cysteine proteinase inhibitor chr5 37515043-37513809 F EGN_Mt100125 20111014	GO:0009628|response to abiotic stimulus	GO:0004869|cysteine-type endopeptidase inhibitor activity GO:0050897|cobalt ion binding	GO:0005576|extracellular region GO:0005783|endoplasmic reticulum GO:0005829|cytosol
pt2_02364	A	A2S	Potri.001G226100	Potri.001G226100(AS) Potri.001G225900(AS)	POPTR_0001s23310	sp|Q5Z9Z0|BGL24_ORYSJ	Beta-glucosidase 24 OS=Oryza sativa subsp. japonica GN=BGLU24 PE=2 SV=1	AT3G60130.1	| Symbols: BGLU16 | beta glucosidase 16 | chr3:22210343-22213650 FORWARD LENGTH=514	LOC_Os06g21570.1	protein|Os6bglu24 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed	IMGA|Medtr5g071520.1	Beta-glucosidase D7 chr5 29396807-29401668 H EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0006816|calcium ion transport GO:0007030|Golgi organization GO:0009651|response to salt stress	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0043169|cation binding	GO:0005576|extracellular region GO:0009505|plant-type cell wall
pt2_02365	A	A2S	Potri.001G226000	Potri.001G226000(AS) Potri.001G226200(BS)	POPTR_0001s23320	sp|Q75W17|FURH_VIBFR	Furcatin hydrolase OS=Viburnum furcatum PE=1 SV=1	AT5G24550.1	| Symbols: BGLU32 | beta glucosidase 32 | chr5:8392059-8395302 REVERSE LENGTH=534	LOC_Os04g39880.1	protein|Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed	IMGA|Medtr5g071520.1	Beta-glucosidase D7 chr5 29396807-29401668 H EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0051707|response to other organism	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0043169|cation binding	GO:0005576|extracellular region
pt2_02366	C	C1S	Potri.001G226000	Potri.001G226000(CS)	sp|Q75W17|FURH_VIBFR	Furcatin hydrolase OS=Viburnum furcatum PE=1 SV=1	AT5G24550.1	| Symbols: BGLU32 | beta glucosidase 32 | chr5:8392059-8395302 REVERSE LENGTH=534	LOC_Os04g39880.1	protein|Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed	IMGA|Medtr5g071520.1	Beta-glucosidase D7 chr5 29396807-29401668 H EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0051707|response to other organism	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0043169|cation binding	GO:0005576|extracellular region
pt2_02367	D	D2S	Potri.001G226000	Potri.001G226000(DS) Potri.001G226200(DS)	POPTR_0001s23350	sp|Q75W17|FURH_VIBFR	Furcatin hydrolase OS=Viburnum furcatum PE=1 SV=1	AT5G24550.1	| Symbols: BGLU32 | beta glucosidase 32 | chr5:8392059-8395302 REVERSE LENGTH=534	LOC_Os04g39880.1	protein|Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed	IMGA|Medtr5g071520.1	Beta-glucosidase D7 chr5 29396807-29401668 H EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0051707|response to other organism	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0043169|cation binding	GO:0005576|extracellular region
pt2_02368	A	A2S	Potri.001G226500	Potri.001G226500(AS) Potri.001G226800(BA)	POPTR_0001s23360	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02369	G	G2	NA	NA	POPTR_0001s23380	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02370	R	R	NA	NA	POPTR_0001s23385	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02371	A	A1S	Potri.001G226800	Potri.001G226800(AS)	POPTR_0001s23390	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02372	A	A1S	Potri.001G226900	Potri.001G226900(AS)	POPTR_0001s23400	sp|C1DKY7|CYSG_AZOVD	Siroheme synthase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=cysG PE=3 SV=1	AT5G40850.1	| Symbols: UPM1 | urophorphyrin methylase 1 | chr5:16367205-16368724 FORWARD LENGTH=369	LOC_Os01g44050.1	protein|siroheme synthase, putative, expressed	NA	NA	GO:0006567|threonine catabolic process GO:0006779|porphyrin-containing compound biosynthetic process GO:0008152|metabolic process GO:0019354|siroheme biosynthetic process GO:0055114|oxidation-reduction process	GO:0004851|uroporphyrin-III C-methyltransferase activity GO:0008168|methyltransferase activity GO:0043115|precorrin-2 dehydrogenase activity	GO:0009507|chloroplast
pt2_02373	C	C1A	Potri.001G227000	Potri.001G227000(CA)	sp|Q8W486|Y1491_ARATH	DUF246 domain-containing protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=1 SV=1	AT2G44500.1	| Symbols: | O-fucosyltransferase family protein | chr2:18374447-18376435 FORWARD LENGTH=573	LOC_Os04g47520.2	protein|growth regulator related protein, putative, expressed	IMGA|Medtr1g024260.1	DUF246 domain-containing protein chr1 7739646-7743015 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0016757|transferase activity, transferring glycosyl groups	GO:0005794|Golgi apparatus
pt2_02374	A	A1S	Potri.001G227000	Potri.001G227000(AS)	POPTR_0001s23420	sp|Q8W486|Y1491_ARATH	DUF246 domain-containing protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=1 SV=1	AT2G44500.1	| Symbols: | O-fucosyltransferase family protein | chr2:18374447-18376435 FORWARD LENGTH=573	LOC_Os04g47520.2	protein|growth regulator related protein, putative, expressed	IMGA|Medtr1g024260.1	DUF246 domain-containing protein chr1 7739646-7743015 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0016757|transferase activity, transferring glycosyl groups	GO:0005794|Golgi apparatus
pt2_02375	A	A1S	Potri.001G227200	Potri.001G227200(AS)	POPTR_0001s23430	sp|A2SY66|VICHY_VICSN	Vicianin hydrolase (Fragment) OS=Vicia sativa subsp. nigra PE=1 SV=1	AT2G44480.1	| Symbols: BGLU17 | beta glucosidase 17 | chr2:18359780-18363001 FORWARD LENGTH=517	LOC_Os04g39880.1	protein|Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed	IMGA|Medtr5g071520.1	Beta-glucosidase D7 chr5 29396807-29401668 H EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0043169|cation binding	GO:0005576|extracellular region
pt2_02376	A	A3S	Potri.001G227300	Potri.001G227300(AS) Potri.T177800(AS) Potri.001G227400(BS)	POPTR_0001s23440	sp|A2SY66|VICHY_VICSN	Vicianin hydrolase (Fragment) OS=Vicia sativa subsp. nigra PE=1 SV=1	AT2G44480.1	| Symbols: BGLU17 | beta glucosidase 17 | chr2:18359780-18363001 FORWARD LENGTH=517	LOC_Os04g39880.1	protein|Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed	IMGA|Medtr5g071520.1	Beta-glucosidase D7 chr5 29396807-29401668 H EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0043169|cation binding	GO:0005576|extracellular region
pt2_02377	G	G2	NA	NA	POPTR_0001s23450	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02378	A	A2S	Potri.001G227400	Potri.001G227400(AS) Potri.001G227300(AS)	POPTR_0001s23460	sp|A2SY66|VICHY_VICSN	Vicianin hydrolase (Fragment) OS=Vicia sativa subsp. nigra PE=1 SV=1	AT2G44480.1	| Symbols: BGLU17 | beta glucosidase 17 | chr2:18359780-18363001 FORWARD LENGTH=517	LOC_Os04g39880.1	protein|Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed	IMGA|Medtr5g071520.1	Beta-glucosidase D7 chr5 29396807-29401668 H EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0043169|cation binding	GO:0005576|extracellular region
pt2_02379	A	A1S	Potri.001G227500	Potri.001G227500(AS)	POPTR_0001s23470	sp|Q9M1D0|BGL16_ARATH	Beta-glucosidase 16 OS=Arabidopsis thaliana GN=BGLU16 PE=2 SV=1	AT3G60130.1	| Symbols: BGLU16 | beta glucosidase 16 | chr3:22210343-22213650 FORWARD LENGTH=514	LOC_Os04g39840.2	protein|Os4bglu10 - beta-glucosidase homologue, similar to Os4Bglu12 exoglucanase/beta-glucosidase, expressed	IMGA|Medtr1g024230.1	Beta-glucosidase D2 chr1 7720326-7726000 E EGN_Mt100125 20111014	GO:0002213|defense response to insect GO:0005975|carbohydrate metabolic process GO:0009737|response to abscisic acid stimulus GO:0010119|regulation of stomatal movement GO:0019762|glucosinolate catabolic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0019137|thioglucosidase activity GO:0043169|cation binding	GO:0005576|extracellular region GO:0005773|vacuole GO:0005777|peroxisome GO:0009506|plasmodesma GO:0009507|chloroplast GO:0022626|cytosolic ribosome GO:0048046|apoplast
pt2_02380	A	A1S	Potri.001G227600	Potri.001G227600(AS)	POPTR_0001s23480	sp|P26205|BGLT_TRIRP	Cyanogenic beta-glucosidase (Fragment) OS=Trifolium repens GN=LI PE=1 SV=1	AT5G44640.1	| Symbols: BGLU13 | beta glucosidase 13 | chr5:18011146-18012669 FORWARD LENGTH=507	LOC_Os06g21570.1	protein|Os6bglu24 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed	IMGA|Medtr1g024230.1	Beta-glucosidase D2 chr1 7720326-7726000 E EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0043169|cation binding	GO:0005576|extracellular region GO:0005794|Golgi apparatus
pt2_02381	G	G1	NA	NA	POPTR_0001s23490	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02382	A	A1S	Potri.001G227900	Potri.001G227900(AS)	POPTR_0001s23500	NA	NA	NA	NA	NA	NA	NA	NA	GO:0000165|MAPK cascade GO:0006355|regulation of transcription, DNA-dependent GO:0006468|protein phosphorylation GO:0006612|protein targeting to membrane GO:0009617|response to bacterium GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0031348|negative regulation of defense response GO:0035304|regulation of protein dephosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_02383	A	A1S	Potri.001G228000	Potri.001G228000(AS)	POPTR_0001s23510	sp|Q5RF97|BCD1_PONAB	Box C/D snoRNA protein 1 OS=Pongo abelii GN=ZNHIT6 PE=2 SV=1	AT1G04945.2	| Symbols: | HIT-type Zinc finger family protein | chr1:1400969-1402651 FORWARD LENGTH=392	LOC_Os01g73150.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0009507|chloroplast
pt2_02384	A	A1S	Potri.001G228100	Potri.001G228100(AS)	POPTR_0001s23520	sp|Q86HW6|Y6461_DICDI	Probable serine/threonine-protein kinase DDB_G0276461 OS=Dictyostelium discoideum GN=DDB_G0276461 PE=3 SV=1	AT2G32850.2	| Symbols: | Protein kinase superfamily protein | chr2:13935448-13937977 REVERSE LENGTH=670	LOC_Os02g37880.1	protein|cyclin G-associated kinase, putative, expressed	IMGA|Medtr5g064540.1	Serine-threonine protein kinase chr5 26127716-26123453 F EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005575|cellular_component GO:0005634|nucleus GO:0005737|cytoplasm
pt2_02385	A	A1S	Potri.001G228200	Potri.001G228200(AS)	POPTR_0001s23530	sp|Q39202|RLK1_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 OS=Arabidopsis thaliana GN=RLK1 PE=2 SV=2	AT5G60900.1	| Symbols: RLK1 | receptor-like protein kinase 1 | chr5:24498467-24501494 REVERSE LENGTH=748	LOC_Os04g39930.1	protein|receptor-like protein kinase, putative, expressed	IMGA|Medtr5g013130.1	Kinase-like protein chr5 3871934-3874336 H EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0006355|regulation of transcription, DNA-dependent GO:0006468|protein phosphorylation GO:0006612|protein targeting to membrane GO:0009617|response to bacterium GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0031348|negative regulation of defense response GO:0035304|regulation of protein dephosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_02386	C	C1S	Potri.001G228300	Potri.001G228300(CS)	sp|Q39202|RLK1_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 OS=Arabidopsis thaliana GN=RLK1 PE=2 SV=2	AT5G60900.1	| Symbols: RLK1 | receptor-like protein kinase 1 | chr5:24498467-24501494 REVERSE LENGTH=748	LOC_Os04g12560.1	protein|receptor-like protein kinase, putative, expressed	IMGA|Medtr5g013130.1	Kinase-like protein chr5 3871934-3874336 H EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0006355|regulation of transcription, DNA-dependent GO:0006468|protein phosphorylation GO:0006612|protein targeting to membrane GO:0009617|response to bacterium GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0031348|negative regulation of defense response GO:0035304|regulation of protein dephosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_02387	A	A1S	Potri.001G228400	Potri.001G228400(AS)	POPTR_0001s23550	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02388	A	A1S	Potri.001G228500	Potri.001G228500(AS)	POPTR_0001s23560	sp|Q8GUN5|PHL1_ARATH	Protein PHR1-LIKE 1 OS=Arabidopsis thaliana GN=PHL1 PE=1 SV=1	AT5G06800.2	| Symbols: | myb-like HTH transcriptional regulator family protein | chr5:2103374-2105186 FORWARD LENGTH=302	LOC_Os04g56990.2	protein|Myb-like DNA-binding domain containing protein, putative, expressed	IMGA|Medtr1g080330.1	Two-component response regulator ARR2 chr1 20210666-20206390 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_02389	A	A1S	Potri.001G228600	Potri.001G228600(AS)	POPTR_0001s23570	NA	NA	AT5G06800.1	| Symbols: | myb-like HTH transcriptional regulator family protein | chr5:2103374-2105680 FORWARD LENGTH=375	LOC_Os04g56990.1	protein|Myb-like DNA-binding domain containing protein, putative, expressed	IMGA|Medtr1g080330.1	Two-component response regulator ARR2 chr1 20210666-20206390 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_02390	A	A1S	Potri.001G228700	Potri.001G228700(AS)	POPTR_0001s23580	sp|A2A1A0|NCS1_COPJA	S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1	AT3G21420.1	| Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr3:7541579-7543221 FORWARD LENGTH=364	LOC_Os10g40880.1	protein|flavonol synthase/flavanone 3-hydroxylase, putative, expressed	IMGA|Medtr5g055680.1	Protein SRG1 chr5 22384306-22387839 F EGN_Mt100125 20111014	GO:0008152|metabolic process GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_02391	B	B1S	Potri.001G228800	Potri.001G228800(BS)	POPTR_0001s23590	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02392	A	A1S	Potri.001G228900	Potri.001G228900(AS)	POPTR_0001s23600	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02393	A	A2S	Potri.001G229000	Potri.001G229000(AS) Potri.009G022900(DS)	POPTR_0001s23610	NA	NA	AT5G13020.1	| Symbols: | Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein | chr5:4129691-4132089 REVERSE LENGTH=397	LOC_Os08g23930.2	protein|ENT domain containing protein, expressed	NA	NA	GO:0008150|biological_process GO:0008284|positive regulation of cell proliferation GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_02394	A	A1S	Potri.001G229100	Potri.001G229100(AS)	POPTR_0001s23620	sp|Q0JCU7|ZEP_ORYSJ	Zeaxanthin epoxidase, chloroplastic OS=Oryza sativa subsp. japonica GN=ZEP PE=2 SV=1	AT5G67030.2	| Symbols: ABA1, LOS6, NPQ2, ATABA1, ZEP, IBS3, ATZEP | zeaxanthin epoxidase (ZEP) (ABA1) | chr5:26754026-26757090 REVERSE LENGTH=610	LOC_Os04g37619.2	protein|zeaxanthin epoxidase, chloroplast precursor, putative, expressed	IMGA|Medtr5g017330.1	Zeaxanthin epoxidase chr5 6056698-6060213 E EGN_Mt100125 20111014	GO:0006970|response to osmotic stress GO:0008152|metabolic process GO:0009408|response to heat GO:0009414|response to water deprivation GO:0009688|abscisic acid biosynthetic process GO:0010114|response to red light GO:0010182|sugar mediated signaling pathway GO:0010264|myo-inositol hexakisphosphate biosynthetic process GO:0016123|xanthophyll biosynthetic process GO:0055114|oxidation-reduction process	GO:0009540|zeaxanthin epoxidase [overall] activity GO:0016491|oxidoreductase activity	GO:0009507|chloroplast GO:0009941|chloroplast envelope GO:0016020|membrane
pt2_02395	A	A1S	Potri.001G229200	Potri.001G229200(AS)	POPTR_0001s23630	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02396	A	A1S	Potri.001G229200	Potri.001G229200(AS)	POPTR_0001s23630	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02397	A	A1S	Potri.001G229200	Potri.001G229200(AS)	POPTR_0001s23630	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02398	A	A1S	Potri.001G229300	Potri.001G229300(AS)	POPTR_0001s23640	NA	NA	AT2G44430.1	| Symbols: | DNA-binding bromodomain-containing protein | chr2:18333603-18336165 FORWARD LENGTH=646	LOC_Os08g39980.1	protein|DNA-binding bromodomain-containing protein, putative, expressed	NA	NA	NA	GO:0003677|DNA binding	GO:0005634|nucleus
pt2_02399	B	B1S	Potri.001G229400	Potri.001G229400(BS)	POPTR_0001s23650	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02400	A	A1S	Potri.001G229500	Potri.001G229500(AS)	POPTR_0001s23660	NA	NA	AT2G27660.1	| Symbols: | Cysteine/Histidine-rich C1 domain family protein | chr2:11798694-11800850 REVERSE LENGTH=718	LOC_Os09g31980.1	protein|DC1 domain-containing protein, putative, expressed	IMGA|Medtr1g034960.1	hypothetical protein chr1 9682526-9685931 E EGN_Mt100125 20111014	GO:0002679|respiratory burst involved in defense response GO:0006865|amino acid transport GO:0010167|response to nitrate GO:0010200|response to chitin GO:0015706|nitrate transport GO:0015824|proline transport GO:0055114|oxidation-reduction process	GO:0008270|zinc ion binding GO:0047134|protein-disulfide reductase activity	NA
pt2_02401	A	A1S	Potri.001G229600	Potri.001G229600(AS)	POPTR_0001s23670	sp|Q91YT2|RN185_MOUSE	E3 ubiquitin-protein ligase RNF185 OS=Mus musculus GN=Rnf185 PE=2 SV=1	AT2G44410.1	| Symbols: | RING/U-box superfamily protein | chr2:18328873-18330114 FORWARD LENGTH=413	LOC_Os01g61420.1	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr5g019300.1	RING finger protein chr5 7035768-7034421 F EGN_Mt100125 20111014	NA	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_02402	A	A1S	Potri.001G229700	Potri.001G229700(AS)	POPTR_0001s23680	sp|P46665|HAT14_ARATH	Homeobox-leucine zipper protein HAT14 OS=Arabidopsis thaliana GN=HAT14 PE=2 SV=3	AT5G06710.1	| Symbols: HAT14 | homeobox from Arabidopsis thaliana | chr5:2068305-2070284 REVERSE LENGTH=336	LOC_Os08g36220.1	protein|homeobox associated leucine zipper, putative, expressed	IMGA|Medtr5g013010.1	Homeobox-leucine zipper protein HOX17 chr5 3801008-3802889 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_02403	A	A1S	Potri.001G229800	Potri.001G229800(AS)	POPTR_0001s23690	NA	NA	AT2G32840.1	| Symbols: | proline-rich family protein | chr2:13933101-13934836 REVERSE LENGTH=337	NA	NA	NA	NA	NA	NA	GO:0005634|nucleus
pt2_02404	A	A1S	Potri.001G229900	Potri.001G229900(AS)	POPTR_0001s23700	NA	NA	AT2G28270.1	| Symbols: | Cysteine/Histidine-rich C1 domain family protein | chr2:12053652-12054398 FORWARD LENGTH=248	LOC_Os07g41930.1	protein|DC1 domain-containing protein, putative, expressed	IMGA|Medtr1g034960.1	hypothetical protein chr1 9682526-9685931 E EGN_Mt100125 20111014	GO:0008150|biological_process GO:0055114|oxidation-reduction process	GO:0003674|molecular_function GO:0047134|protein-disulfide reductase activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02405	A	A1S	Potri.001G230000	Potri.001G230000(AS)	POPTR_0001s23710	sp|Q9LXT9|CALS3_ARATH	Callose synthase 3 OS=Arabidopsis thaliana GN=CALS3 PE=2 SV=3	AT5G13000.1	| Symbols: ATGSL12, gsl12 | glucan synthase-like 12 | chr5:4110445-4121202 REVERSE LENGTH=1955	LOC_Os03g03610.1	protein|1,3-beta-glucan synthase component domain containing protein, expressed	IMGA|AC235753_1023.1	Callose synthase AC235753.2 124305-113042 E EGN_Mt100125 20111014	GO:0000226|microtubule cytoskeleton organization GO:0006075|(1->3)-beta-D-glucan biosynthetic process GO:0006346|methylation-dependent chromatin silencing GO:0006944|cellular membrane fusion GO:0007267|cell-cell signaling GO:0009556|microsporogenesis GO:0009616|virus induced gene silencing GO:0010228|vegetative to reproductive phase transition of meristem GO:0010267|production of ta-siRNAs involved in RNA interference GO:0016246|RNA interference GO:0016926|protein desumoylation GO:0031048|chromatin silencing by small RNA GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0050665|hydrogen peroxide biosynthetic process GO:0051567|histone H3-K9 methylation GO:0052543|callose deposition in cell wall	GO:0003843|1,3-beta-D-glucan synthase activity GO:0016757|transferase activity, transferring glycosyl groups	GO:0000148|1,3-beta-D-glucan synthase complex GO:0005886|plasma membrane GO:0009504|cell plate GO:0009506|plasmodesma GO:0016020|membrane
pt2_02406	A	A1S	Potri.001G230100	Potri.001G230100(AS)	POPTR_0001s23720	NA	NA	AT2G44360.1	| Symbols: | unknown protein; Has 23 Blast hits to 23 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:18320855-18321584 REVERSE LENGTH=135	LOC_Os09g38080.1	protein|retrotransposon protein, putative, unclassified, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_02407	C	C2S	Potri.001G230100	Potri.001G230100(CS) Potri.001G230200(CA)	NA	NA	AT2G44360.1	| Symbols: | unknown protein; Has 23 Blast hits to 23 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:18320855-18321584 REVERSE LENGTH=135	LOC_Os09g38080.1	protein|retrotransposon protein, putative, unclassified, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_02408	A	A1S	Potri.001G230300	Potri.001G230300(AS)	POPTR_0001s23740	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02409	G	G1	NA	NA	POPTR_0001s23750	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02410	A	A1S	Potri.001G230500	Potri.001G230500(AS)	POPTR_0001s23760	sp|O80433|CISY_DAUCA	Citrate synthase, mitochondrial OS=Daucus carota GN=CS PE=2 SV=1	AT2G44350.2	| Symbols: ATCS, CSY4 | Citrate synthase family protein | chr2:18316673-18320524 FORWARD LENGTH=474	LOC_Os02g10070.2	protein|citrate synthase, putative, expressed	IMGA|Medtr5g091930.1	Citrate synthase chr5 39080555-39085032 E EGN_Mt100125 20111014	GO:0006096|glycolysis GO:0006099|tricarboxylic acid cycle GO:0009060|aerobic respiration GO:0044262|cellular carbohydrate metabolic process GO:0046686|response to cadmium ion	GO:0004108|citrate (SI)-synthase activity GO:0005524|ATP binding GO:0008270|zinc ion binding GO:0046912|transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer	GO:0005618|cell wall GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_02411	A	A1S	Potri.001G230600	Potri.001G230600(AS)	POPTR_0001s23770	sp|Q8GX29|SKI25_ARATH	F-box/kelch-repeat protein SKIP25 OS=Arabidopsis thaliana GN=SKIP25 PE=1 SV=1	AT1G31350.1	| Symbols: KUF1 | KAR-UP F-box 1 | chr1:11221519-11222706 REVERSE LENGTH=395	LOC_Os06g49750.1	protein|kelch motif family protein, expressed	IMGA|Medtr5g026580.1	F-box/kelch-repeat protein SKIP25 chr5 10684366-10682756 F EGN_Mt100125 20111014	GO:0080167|response to karrikin	GO:0005515|protein binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02412	A	A1S	Potri.001G230700	Potri.001G230700(AS)	POPTR_0001s23780	sp|Q39055|CNX2_ARATH	Molybdopterin biosynthesis protein CNX2 OS=Arabidopsis thaliana GN=CNX2 PE=2 SV=1	AT2G31955.3	| Symbols: CNX2 | cofactor of nitrate reductase and xanthine dehydrogenase 2 | chr2:13584635-13586484 REVERSE LENGTH=382	LOC_Os12g32230.2	protein|molybdenum cofactor biosynthesis protein 1, putative, expressed	NA	NA	GO:0006777|Mo-molybdopterin cofactor biosynthetic process	GO:0003824|catalytic activity GO:0046872|metal ion binding GO:0051536|iron-sulfur cluster binding GO:0051539|4 iron, 4 sulfur cluster binding	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0019008|molybdopterin synthase complex
pt2_02413	A	A1S	Potri.001G230800	Potri.001G230800(AS)	POPTR_0001s23790	NA	NA	AT2G44340.1	| Symbols: | VQ motif-containing protein | chr2:18314279-18314845 FORWARD LENGTH=188	NA	NA	IMGA|contig_86261_1.1	VQ motif family protein contig_86261 588-133 H PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_02414	C	C1S	Potri.001G230900	Potri.001G230900(CS)	NA	NA	AT2G31945.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G05575.1); Has 61 Blast hits to 61 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:13581691-13581978 FORWARD LENGTH=95	LOC_Os09g27410.1	protein|expressed protein	NA	NA	GO:0008150|biological_process GO:0009407|toxin catabolic process GO:0009693|ethylene biosynthetic process GO:0010583|response to cyclopentenone	GO:0003674|molecular_function	NA
pt2_02415	A	A1S	Potri.001G231000	Potri.001G231000(AS)	POPTR_0001s23810	sp|Q8LPN7|RNG1L_ARATH	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=2 SV=1	AT3G60080.1	| Symbols: | RING/U-box superfamily protein | chr3:22187635-22188555 FORWARD LENGTH=306	LOC_Os03g22830.2	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr5g088720.3	Thioredoxin-related protein chr5 37468686-37475289 F EGN_Mt100125 20111014	NA	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_02416	A	A1S	Potri.001G231100	Potri.001G231100(AS)	POPTR_0001s23820	NA	NA	AT2G44310.1	| Symbols: | Calcium-binding EF-hand family protein | chr2:18309285-18309713 FORWARD LENGTH=142	LOC_Os03g29770.1	protein|EF hand family protein, expressed	NA	NA	GO:0008150|biological_process	GO:0005509|calcium ion binding	GO:0005634|nucleus GO:0005829|cytosol
pt2_02417	G	G1	NA	NA	POPTR_0001s23830	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02418	A	A1S	Potri.001G231300	Potri.001G231300(AS)	POPTR_0001s23840	NA	NA	AT5G19875.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G31940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:6718412-6718783 FORWARD LENGTH=123	LOC_Os09g27330.1	protein|oxidoreductase/ transition metal ion binding protein, putative, expressed	IMGA|Medtr5g084250.1	hypothetical protein chr5 35344101-35343476 F EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005739|mitochondrion
pt2_02419	A	A2S	Potri.001G232000	Potri.001G232000(AS) Potri.001G231400(AS)	POPTR_0001s23850	NA	NA	AT2G44290.1	| Symbols: | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr2:18305418-18306202 REVERSE LENGTH=205	LOC_Os07g09970.1	protein|LTPL84 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	IMGA|contig_179832_1.1	Non-specific lipid-transfer protein contig_179832 1008-250 H PREDN 20111014	GO:0006869|lipid transport	GO:0008289|lipid binding	GO:0005886|plasma membrane GO:0031225|anchored to membrane
pt2_02420	A	A2S	Potri.001G232000	Potri.001G232000(AS) Potri.001G231400(AS)	POPTR_0001s23850	NA	NA	AT2G44290.1	| Symbols: | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr2:18305418-18306202 REVERSE LENGTH=205	LOC_Os07g09970.1	protein|LTPL84 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	IMGA|contig_179832_1.1	Non-specific lipid-transfer protein contig_179832 1008-250 H PREDN 20111014	GO:0006869|lipid transport	GO:0008289|lipid binding	GO:0005886|plasma membrane GO:0031225|anchored to membrane
pt2_02421	C	C2S	Potri.001G231400	Potri.001G231400(CS) Potri.001G232000(CS)	NA	NA	AT2G44290.1	| Symbols: | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr2:18305418-18306202 REVERSE LENGTH=205	LOC_Os07g09970.1	protein|LTPL84 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	IMGA|contig_179832_1.1	Non-specific lipid-transfer protein contig_179832 1008-250 H PREDN 20111014	GO:0006869|lipid transport	GO:0008289|lipid binding	GO:0005886|plasma membrane GO:0031225|anchored to membrane
pt2_02422	A	A3S	Potri.001G231500	Potri.001G231500(AS) Potri.001G232100(AS) Potri.009G024600(DS)	POPTR_0001s23860	sp|Q6NUT3|MFS12_HUMAN	Major facilitator superfamily domain-containing protein 12 OS=Homo sapiens GN=MFSD12 PE=2 SV=2	AT3G60070.1	| Symbols: | Major facilitator superfamily protein | chr3:22183572-22185941 REVERSE LENGTH=458	LOC_Os07g39010.1	protein|lactose permease-related, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_02423	A	A2S	Potri.001G231600	Potri.001G231600(AS) Potri.001G232200(AS)	POPTR_0001s23870	NA	NA	AT2G31930.1	| Symbols: | unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr2:13577566-13577997 FORWARD LENGTH=143	NA	NA	NA	NA	GO:0008150|biological_process GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_02424	A	A2S	Potri.001G231700	Potri.001G231700(AS) Potri.001G232300(AS)	POPTR_0001s23880	NA	NA	AT1G05577.1	| Symbols: | Domain of unknown function (DUF966) | chr1:1662643-1664288 REVERSE LENGTH=372	LOC_Os01g57020.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_02425	A	A2S	Potri.001G231800	Potri.001G231800(AS) Potri.001G232400(BS)	POPTR_0001s23890	sp|Q9LKF9|CPSF2_ARATH	Cleavage and polyadenylation specificity factor subunit 2 OS=Arabidopsis thaliana GN=CPSF100 PE=1 SV=2	AT5G23880.1	| Symbols: EMB1265, CPSF100, ESP5, ATCPSF100 | cleavage and polyadenylation specificity factor 100 | chr5:8052550-8058147 FORWARD LENGTH=739	LOC_Os09g39590.1	protein|metallo-beta-lactamase, putative, expressed	NA	NA	GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0006378|mRNA polyadenylation GO:0006379|mRNA cleavage GO:0006396|RNA processing GO:0006397|mRNA processing GO:0007267|cell-cell signaling GO:0009220|pyrimidine ribonucleotide biosynthetic process GO:0009616|virus induced gene silencing GO:0009640|photomorphogenesis GO:0009793|embryo development ending in seed dormancy GO:0010267|production of ta-siRNAs involved in RNA interference GO:0010388|cullin deneddylation GO:0016569|covalent chromatin modification GO:0031047|gene silencing by RNA GO:0035194|posttranscriptional gene silencing by RNA GO:0035196|production of miRNAs involved in gene silencing by miRNA	GO:0003677|DNA binding GO:0005515|protein binding GO:0016787|hydrolase activity	GO:0005634|nucleus GO:0005847|mRNA cleavage and polyadenylation specificity factor complex GO:0009506|plasmodesma
pt2_02426	A	A3S	Potri.001G231900	Potri.001G231900(AS) Potri.001G232500(AS) Potri.T132200(DS)	POPTR_0001s23900	NA	NA	AT2G44260.2	| Symbols: | Plant protein of unknown function (DUF946) | chr2:18295988-18297739 FORWARD LENGTH=583	LOC_Os07g38840.1	protein|expressed protein	IMGA|Medtr1g080370.1	hypothetical protein chr1 20233964-20237129 F EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_02427	A	A2S	Potri.001G232600	Potri.001G232600(AS) Potri.001G232800(DS)	POPTR_0001s23910	sp|P43077|HEX1_CANAX	Beta-hexosaminidase OS=Candida albicans GN=HEX1 PE=1 SV=1	AT1G05590.1	| Symbols: HEXO2, ATHEX3 | beta-hexosaminidase 2 | chr1:1669871-1671686 FORWARD LENGTH=580	LOC_Os07g38790.1	protein|beta-hexosaminidase precursor, putative, expressed	IMGA|contig_62200_1.1	Beta-hexosaminidase contig_62200 5097-803 E PREDN 20111014	GO:0005975|carbohydrate metabolic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0004563|beta-N-acetylhexosaminidase activity GO:0015929|hexosaminidase activity GO:0035251|UDP-glucosyltransferase activity GO:0043169|cation binding	GO:0005576|extracellular region GO:0005886|plasma membrane
pt2_02428	A	A2S	Potri.001G232700	Potri.001G232700(AS) Potri.001G232900(BS)	POPTR_0001s23920	sp|Q9ZPW9|NLTP8_ARATH	Non-specific lipid-transfer protein 8 OS=Arabidopsis thaliana GN=LTP8 PE=2 SV=1	AT2G18370.1	| Symbols: | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr2:7980687-7981475 FORWARD LENGTH=116	LOC_Os06g34840.1	protein|LTPL5 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed	NA	NA	GO:0006869|lipid transport	GO:0008289|lipid binding	GO:0005576|extracellular region
pt2_02429	A	A2S	Potri.001G232800	Potri.001G232800(AS) Potri.001G232600(DS)	POPTR_0001s23930	sp|P43077|HEX1_CANAX	Beta-hexosaminidase OS=Candida albicans GN=HEX1 PE=1 SV=1	AT1G05590.1	| Symbols: HEXO2, ATHEX3 | beta-hexosaminidase 2 | chr1:1669871-1671686 FORWARD LENGTH=580	LOC_Os07g38790.1	protein|beta-hexosaminidase precursor, putative, expressed	IMGA|contig_62200_1.1	Beta-hexosaminidase contig_62200 5097-803 E PREDN 20111014	GO:0005975|carbohydrate metabolic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0004563|beta-N-acetylhexosaminidase activity GO:0015929|hexosaminidase activity GO:0035251|UDP-glucosyltransferase activity GO:0043169|cation binding	GO:0005576|extracellular region GO:0005886|plasma membrane
pt2_02430	A	A2S	Potri.001G232900	Potri.001G232900(AS) Potri.001G232700(BS)	POPTR_0001s23940	sp|Q9ZPW9|NLTP8_ARATH	Non-specific lipid-transfer protein 8 OS=Arabidopsis thaliana GN=LTP8 PE=2 SV=1	AT2G18370.1	| Symbols: | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr2:7980687-7981475 FORWARD LENGTH=116	LOC_Os06g34840.1	protein|LTPL5 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed	NA	NA	GO:0006869|lipid transport	GO:0008289|lipid binding	GO:0005576|extracellular region
pt2_02431	A	A1S	Potri.001G233000	Potri.001G233000(AS)	POPTR_0001s23950	NA	NA	AT3G13510.1	| Symbols: | Protein of Unknown Function (DUF239) | chr3:4403776-4405741 FORWARD LENGTH=419	LOC_Os07g10530.1	protein|carboxyl-terminal peptidase, putative, expressed	IMGA|Medtr1g079730.1	hypothetical protein chr1 19938198-19941909 E EGN_Mt100125 20111014	GO:0006346|methylation-dependent chromatin silencing GO:0008150|biological_process GO:0009744|response to sucrose stimulus GO:0009813|flavonoid biosynthetic process GO:0009855|determination of bilateral symmetry GO:0009887|organ morphogenesis GO:0009944|polarity specification of adaxial/abaxial axis GO:0010014|meristem initiation GO:0010051|xylem and phloem pattern formation GO:0010073|meristem maintenance GO:0010075|regulation of meristem growth GO:0010224|response to UV-B GO:0016246|RNA interference GO:0048439|flower morphogenesis GO:0048519|negative regulation of biological process	NA	GO:0005576|extracellular region
pt2_02432	A	A1S	Potri.001G233100	Potri.001G233100(AS)	POPTR_0001s23960	sp|P54697|MYOJ_DICDI	Myosin-J heavy chain OS=Dictyostelium discoideum GN=myoJ PE=4 SV=2	AT2G31900.1	| Symbols: XIF, ATXIF, ATMYO5 | myosin-like protein XIF | chr2:13560760-13569623 REVERSE LENGTH=1556	LOC_Os03g53660.1	protein|Myosin head domain containing protein, expressed	IMGA|contig_50747_1.1	Myosin XI contig_50747 226-12071 H PREDN 20111014	GO:0009624|response to nematode GO:0010089|xylem development GO:0044036|cell wall macromolecule metabolic process GO:0051645|Golgi localization GO:0051646|mitochondrion localization GO:0060151|peroxisome localization	GO:0003774|motor activity GO:0005515|protein binding GO:0005524|ATP binding	GO:0016459|myosin complex GO:0016461|unconventional myosin complex
pt2_02433	A	A1S	Potri.001G233200	Potri.001G233200(AS)	POPTR_0001s23970	sp|P0C872|JMJD7_MOUSE	JmjC domain-containing protein 7 OS=Mus musculus GN=Jmjd7 PE=2 SV=1	AT3G45880.1	| Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr3:16869855-16871544 REVERSE LENGTH=345	LOC_Os09g31050.1	protein|cytosolic phospholipase A2 beta, putative, expressed	IMGA|Medtr5g025190.1	JmjC domain-containing protein chr5 9962182-9965347 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0008654|phospholipid biosynthetic process	NA	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_02434	A	A1S	Potri.001G233300	Potri.001G233300(AS)	POPTR_0001s23980	sp|Q8LCU7|MECR_ARATH	Probable trans-2-enoyl-CoA reductase, mitochondrial OS=Arabidopsis thaliana GN=At3g45770 PE=1 SV=1	AT3G45770.1	| Symbols: | Polyketide synthase, enoylreductase family protein | chr3:16805753-16807774 REVERSE LENGTH=375	LOC_Os11g01154.4	protein|dehydrogenase, putative, expressed	NA	NA	GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0005507|copper ion binding GO:0005524|ATP binding GO:0008270|zinc ion binding GO:0016491|oxidoreductase activity GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0005634|nucleus GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_02435	A	A1S	Potri.001G233400	Potri.001G233400(AS)	POPTR_0001s23990	sp|Q9XES1|ECA4_ARATH	Calcium-transporting ATPase 4, endoplasmic reticulum-type OS=Arabidopsis thaliana GN=ECA4 PE=2 SV=2	AT1G07670.1	| Symbols: ATECA4, ECA4 | endomembrane-type CA-ATPase 4 | chr1:2370305-2374196 REVERSE LENGTH=1061	LOC_Os03g17310.1	protein|calcium-transporting ATPase, endoplasmic reticulum-type, putative, expressed	IMGA|Medtr5g015590.1	"Calcium-transporting ATPase 2, plasma membrane-type" chr5 5159662-5165001 E EGN_Mt100125 20111014	GO:0006754|ATP biosynthetic process GO:0006812|cation transport GO:0006816|calcium ion transport GO:0008152|metabolic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0005388|calcium-transporting ATPase activity GO:0005524|ATP binding GO:0015662|ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism GO:0016820|hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances GO:0046872|metal ion binding	GO:0005634|nucleus GO:0005783|endoplasmic reticulum GO:0005886|plasma membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_02436	A	A1S	Potri.001G233500	Potri.001G233500(AS)	POPTR_0001s24000	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02437	A	A1S	Potri.001G233600	Potri.001G233600(AS)	POPTR_0001s24010	NA	NA	AT5G59990.1	| Symbols: | CCT motif family protein | chr5:24151206-24153084 REVERSE LENGTH=241	LOC_Os01g61900.1	protein|CCT motif family protein, expressed	IMGA|Medtr5g010120.1	Zinc finger protein CONSTANS-like protein chr5 2398574-2400307 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02438	A	A1S	Potri.001G233700	Potri.001G233700(AS)	POPTR_0001s24020	sp|O23826|K125_TOBAC	125 kDa kinesin-related protein OS=Nicotiana tabacum GN=TKRP125 PE=1 SV=1	AT3G45850.2	| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr3:16855814-16860950 REVERSE LENGTH=1058	LOC_Os05g02670.1	protein|kinesin motor domain containing protein, putative, expressed	IMGA|Medtr5g066320.1	Kinesin-like protein chr5 26974235-26983370 E EGN_Mt100125 20111014	GO:0007020|microtubule nucleation	GO:0003777|microtubule motor activity GO:0005524|ATP binding	GO:0005886|plasma membrane
pt2_02439	C	C1A	Potri.001G233800	Potri.001G233800(CA)	sp|Q6PIJ4|NFRKB_MOUSE	Nuclear factor related to kappa-B-binding protein OS=Mus musculus GN=Nfrkb PE=2 SV=1	AT3G45830.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02290.1); Has 499 Blast hits to 438 proteins in 100 species: Archae - 0; Bacteria - 7; Metazoa - 236; Fungi - 15; Plants - 108; Viruses - 2; Other Eukaryotes - 131 (source: NCBI BLink). | chr3:16841277-16845173 FORWARD LENGTH=1298	LOC_Os05g02680.1	protein|nuclear factor related to kappa-B-binding protein, related, putative, expressed	IMGA|contig_51676_1.1	Unknown protein contig_51676 2357-9275 E PREDN 20111014	GO:0006259|DNA metabolic process GO:0006396|RNA processing GO:0007062|sister chromatid cohesion GO:0007126|meiosis GO:0007129|synapsis GO:0007131|reciprocal meiotic recombination GO:0008150|biological_process GO:0008284|positive regulation of cell proliferation GO:0010332|response to gamma radiation GO:0010413|glucuronoxylan metabolic process GO:0031048|chromatin silencing by small RNA GO:0032204|regulation of telomere maintenance GO:0032504|multicellular organism reproduction GO:0033044|regulation of chromosome organization GO:0042138|meiotic DNA double-strand break formation GO:0043247|telomere maintenance in response to DNA damage GO:0045132|meiotic chromosome segregation GO:0045492|xylan biosynthetic process GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02440	A	A1S	Potri.001G233800	Potri.001G233800(AS)	POPTR_0001s24040	sp|Q6PIJ4|NFRKB_MOUSE	Nuclear factor related to kappa-B-binding protein OS=Mus musculus GN=Nfrkb PE=2 SV=1	AT3G45830.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02290.1); Has 499 Blast hits to 438 proteins in 100 species: Archae - 0; Bacteria - 7; Metazoa - 236; Fungi - 15; Plants - 108; Viruses - 2; Other Eukaryotes - 131 (source: NCBI BLink). | chr3:16841277-16845173 FORWARD LENGTH=1298	LOC_Os05g02680.1	protein|nuclear factor related to kappa-B-binding protein, related, putative, expressed	IMGA|contig_51676_1.1	Unknown protein contig_51676 2357-9275 E PREDN 20111014	GO:0006259|DNA metabolic process GO:0006396|RNA processing GO:0007062|sister chromatid cohesion GO:0007126|meiosis GO:0007129|synapsis GO:0007131|reciprocal meiotic recombination GO:0008150|biological_process GO:0008284|positive regulation of cell proliferation GO:0010332|response to gamma radiation GO:0010413|glucuronoxylan metabolic process GO:0031048|chromatin silencing by small RNA GO:0032204|regulation of telomere maintenance GO:0032504|multicellular organism reproduction GO:0033044|regulation of chromosome organization GO:0042138|meiotic DNA double-strand break formation GO:0043247|telomere maintenance in response to DNA damage GO:0045132|meiotic chromosome segregation GO:0045492|xylan biosynthetic process GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02441	A	A1S	Potri.001G233900	Potri.001G233900(AS)	POPTR_0001s24050	sp|Q9LVG9|Y5600_ARATH	BTB/POZ domain-containing protein At5g60050 OS=Arabidopsis thaliana GN=At5g60050 PE=2 SV=1	AT5G60050.1	| Symbols: | BTB/POZ domain-containing protein | chr5:24183680-24185264 REVERSE LENGTH=499	LOC_Os04g49060.1	protein|H-BTB3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed	NA	NA	NA	NA	GO:0009507|chloroplast
pt2_02442	C	C1S	Potri.001G234000	Potri.001G234000(CS)	NA	NA	AT1G07850.1	| Symbols: | Protein of unknown function (DUF604) | chr1:2426745-2428719 FORWARD LENGTH=541	NA	NA	IMGA|Medtr5g010070.1	hypothetical protein chr5 2381571-2385382 E EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation	GO:0016757|transferase activity, transferring glycosyl groups	GO:0005794|Golgi apparatus
pt2_02443	A	A1S	Potri.001G234100	Potri.001G234100(AS)	POPTR_0001s24070	sp|Q9LQQ8|RLCK7_ARATH	Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1	AT1G07870.1	| Symbols: | Protein kinase superfamily protein | chr1:2429933-2431843 REVERSE LENGTH=423	LOC_Os07g49470.1	protein|protein kinase APK1B, chloroplast precursor, putative, expressed	IMGA|Medtr5g092120.1	Serine/threonine protein kinase chr5 39187993-39185584 F EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006499|N-terminal protein myristoylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_02444	A	A1S	Potri.001G234200	Potri.001G234200(AS)	POPTR_0001s24080	sp|Q9LX66|HERK_ARATH	Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1	AT3G46290.1	| Symbols: HERK1 | hercules receptor kinase 1 | chr3:17013009-17015501 FORWARD LENGTH=830	LOC_Os06g22810.1	protein|TKL_IRAK_CrRLK1L-1.14 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed	IMGA|contig_75928_1.1	Receptor-like kinase contig_75928 234-3010 H PREDN 20111014	GO:0006468|protein phosphorylation GO:0009741|response to brassinosteroid stimulus GO:0009742|brassinosteroid mediated signaling pathway GO:0009791|post-embryonic development GO:0009826|unidimensional cell growth GO:0051510|regulation of unidimensional cell growth	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_02445	A	A1S	Potri.001G234300	Potri.001G234300(AS)	POPTR_0001s24090	sp|Q9LX73|UFL1_ARATH	E3 UFM1-protein ligase 1 homolog OS=Arabidopsis thaliana GN=At3g46220 PE=2 SV=1	AT3G46220.1	| Symbols: | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2042 (InterPro:IPR018611); Has 559 Blast hits to 533 proteins in 154 species: Archae - 3; Bacteria - 32; Metazoa - 305; Fungi - 42; Plants - 50; Viruses - 3; Other Eukaryotes - 124 (source: NCBI BLink). | chr3:16979174-16983970 FORWARD LENGTH=804	LOC_Os05g02650.1	protein|expressed protein	NA	NA	GO:0008150|biological_process GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process	NA	NA
pt2_02446	C	C1A	Potri.001G234300	Potri.001G234300(CA)	sp|Q9LX73|UFL1_ARATH	E3 UFM1-protein ligase 1 homolog OS=Arabidopsis thaliana GN=At3g46220 PE=2 SV=1	AT3G46220.1	| Symbols: | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2042 (InterPro:IPR018611); Has 559 Blast hits to 533 proteins in 154 species: Archae - 3; Bacteria - 32; Metazoa - 305; Fungi - 42; Plants - 50; Viruses - 3; Other Eukaryotes - 124 (source: NCBI BLink). | chr3:16979174-16983970 FORWARD LENGTH=804	LOC_Os05g02650.1	protein|expressed protein	NA	NA	GO:0008150|biological_process GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process	NA	NA
pt2_02447	G	G1	NA	NA	POPTR_0001s24110	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02448	A	A1S	Potri.001G234500	Potri.001G234500(AS)	POPTR_0001s24120	sp|Q9SIB2|KCS12_ARATH	3-ketoacyl-CoA synthase 12 OS=Arabidopsis thaliana GN=KCS12 PE=2 SV=1	AT2G28630.1	| Symbols: KCS12 | 3-ketoacyl-CoA synthase 12 | chr2:12275719-12277149 REVERSE LENGTH=476	LOC_Os10g33370.1	protein|3-ketoacyl-CoA synthase precursor, putative, expressed	IMGA|Medtr5g056510.1	3-ketoacyl-CoA synthase chr5 22730882-22729392 H EGN_Mt100125 20111014	GO:0006633|fatty acid biosynthetic process GO:0008152|metabolic process GO:0008610|lipid biosynthetic process	GO:0003824|catalytic activity GO:0016746|transferase activity, transferring acyl groups GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0005576|extracellular region GO:0005783|endoplasmic reticulum GO:0016020|membrane
pt2_02449	B	B1S	Potri.001G234600	Potri.001G234600(BS)	POPTR_0001s24130	sp|O54922|EXOC7_RAT	Exocyst complex component 7 OS=Rattus norvegicus GN=Exoc7 PE=2 SV=1	AT2G39380.1	| Symbols: ATEXO70H2, EXO70H2 | exocyst subunit exo70 family protein H2 | chr2:16447096-16449009 REVERSE LENGTH=637	LOC_Os09g26820.1	protein|exo70 exocyst complex subunit, putative, expressed	IMGA|Medtr5g073450.1	Exocyst complex component chr5 30274154-30276420 E EGN_Mt100125 20111014	GO:0006826|iron ion transport GO:0006865|amino acid transport GO:0006887|exocytosis GO:0006904|vesicle docking involved in exocytosis GO:0010106|cellular response to iron ion starvation GO:0010167|response to nitrate GO:0015706|nitrate transport	NA	GO:0000145|exocyst GO:0005634|nucleus
pt2_02450	A	A1S	Potri.001G234700	Potri.001G234700(AS)	POPTR_0001s24140	NA	NA	AT2G37390.1	| Symbols: NAKR2 | Chloroplast-targeted copper chaperone protein | chr2:15694300-15695461 FORWARD LENGTH=259	LOC_Os03g60480.1	protein|heavy metal-associated domain containing protein, expressed	NA	NA	GO:0006612|protein targeting to membrane GO:0006825|copper ion transport GO:0009908|flower development GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010015|root morphogenesis GO:0010233|phloem transport GO:0010363|regulation of plant-type hypersensitive response GO:0030001|metal ion transport GO:0055078|sodium ion homeostasis	GO:0005507|copper ion binding GO:0046872|metal ion binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0009507|chloroplast
pt2_02451	A	A1S	Potri.001G234800	Potri.001G234800(AS)	POPTR_0001s24150	sp|Q6NMB6|UTR5B_ARATH	UDP-galactose/UDP-glucose transporter 5B OS=Arabidopsis thaliana GN=At5g59740 PE=2 SV=1	AT5G59740.1	| Symbols: | UDP-N-acetylglucosamine (UAA) transporter family | chr5:24070310-24072747 REVERSE LENGTH=344	LOC_Os05g02490.1	protein|transporter family protein, putative, expressed	IMGA|Medtr5g038900.1	Solute carrier family protein chr5 16690825-16695289 F EGN_Mt100125 20111014	GO:0007062|sister chromatid cohesion GO:0031048|chromatin silencing by small RNA GO:0045132|meiotic chromosome segregation GO:0055085|transmembrane transport	GO:0005354|galactose transmembrane transporter activity	NA
pt2_02452	A	A1S	Potri.001G234900	Potri.001G234900(AS)	POPTR_0001s24160	sp|P47924|RIBBA_ARATH	Riboflavin biosynthesis protein ribBA, chloroplastic OS=Arabidopsis thaliana GN=RIBBA PE=2 SV=2	AT5G59750.1	| Symbols: | DHBP synthase RibB-like alpha/beta domain;GTP cyclohydrolase II | chr5:24073397-24075411 FORWARD LENGTH=509	LOC_Os05g38570.1	protein|riboflavin biosynthesis protein ribAB, chloroplast precursor, putative, expressed	NA	NA	GO:0009231|riboflavin biosynthetic process GO:0016556|mRNA modification	GO:0003935|GTP cyclohydrolase II activity GO:0008686|3,4-dihydroxy-2-butanone-4-phosphate synthase activity	GO:0009507|chloroplast
pt2_02453	C	C1S	Potri.001G235000	Potri.001G235000(CS)	sp|Q9AT35|RL23A_DAUCA	60S ribosomal protein L23a OS=Daucus carota GN=RPL23A PE=2 SV=1	AT3G55280.2	| Symbols: RPL23AB | ribosomal protein L23AB | chr3:20500667-20501519 FORWARD LENGTH=154	LOC_Os01g24690.1	protein|60S ribosomal protein L23A, putative, expressed	NA	NA	GO:0006412|translation GO:0006979|response to oxidative stress GO:0009409|response to cold GO:0009644|response to high light intensity	GO:0000166|nucleotide binding GO:0003723|RNA binding GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005737|cytoplasm GO:0005840|ribosome GO:0016020|membrane GO:0022625|cytosolic large ribosomal subunit GO:0022626|cytosolic ribosome
pt2_02454	B	B1S	Potri.001G235100	Potri.001G235100(BS)	POPTR_0001s24180	sp|P93823|ATL1_ARATH	RING-H2 finger protein ATL1 OS=Arabidopsis thaliana GN=ATL1 PE=2 SV=1	AT1G04360.1	| Symbols: | RING/U-box superfamily protein | chr1:1167507-1168652 REVERSE LENGTH=381	LOC_Os01g55110.1	protein|RING-H2 finger protein, putative, expressed	IMGA|Medtr5g064890.1	RING-H2 finger protein ATL1O chr5 26287066-26288801 E EGN_Mt100125 20111014	NA	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_02455	A	A1S	Potri.001G235200	Potri.001G235200(AS)	POPTR_0001s24190	NA	NA	AT2G28690.1	| Symbols: | Protein of unknown function (DUF1635) | chr2:12307140-12308477 REVERSE LENGTH=231	LOC_Os05g02450.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_02456	A	A1S	Potri.001G235200	Potri.001G235200(AS)	POPTR_0001s24190	NA	NA	AT2G28690.1	| Symbols: | Protein of unknown function (DUF1635) | chr2:12307140-12308477 REVERSE LENGTH=231	LOC_Os05g02450.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_02457	A	A1S	Potri.001G235200	Potri.001G235200(AS)	POPTR_0001s24190	NA	NA	AT2G28690.1	| Symbols: | Protein of unknown function (DUF1635) | chr2:12307140-12308477 REVERSE LENGTH=231	LOC_Os05g02450.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_02458	A	A1S	Potri.001G235300	Potri.001G235300(AS)	POPTR_0001s24200	sp|O82598|TIP13_ARATH	Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3 PE=1 SV=1	AT4G01470.1	| Symbols: GAMMA-TIP3, TIP1;3, ATTIP1.3 | tonoplast intrinsic protein 1;3 | chr4:625092-625850 REVERSE LENGTH=252	LOC_Os01g74450.1	protein|aquaporin protein, putative, expressed	IMGA|Medtr5g012810.1	Aquaporin TIP2-3 chr5 3671983-3673705 F EGN_Mt100125 20111014	GO:0006810|transport GO:0006833|water transport GO:0015840|urea transport GO:0055085|transmembrane transport	GO:0005215|transporter activity GO:0015204|urea transmembrane transporter activity GO:0015250|water channel activity	GO:0005737|cytoplasm GO:0016020|membrane GO:0016021|integral to membrane
pt2_02459	A	A1S	Potri.001G235400	Potri.001G235400(AS)	POPTR_0001s24210	sp|Q2KIP8|HACD2_BOVIN	3-hydroxyacyl-CoA dehydratase 2 OS=Bos taurus GN=PTPLB PE=2 SV=2	AT5G59770.1	| Symbols: | Protein-tyrosine phosphatase-like, PTPLA | chr5:24079521-24081195 REVERSE LENGTH=272	LOC_Os05g38590.2	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_02460	A	A1S	Potri.001G235500	Potri.001G235500(AS)	POPTR_0001s24220	sp|Q9LX82|MYB48_ARATH	Transcription factor MYB48 OS=Arabidopsis thaliana GN=MYB48 PE=2 SV=1	AT3G46130.1	| Symbols: ATMYB48, ATMYB48-3, MYB48 | myb domain protein 48 | chr3:16945433-16946376 FORWARD LENGTH=256	LOC_Os11g47460.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr1g086510.1	Myb-like transcription factor chr1 23058938-23060452 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009751|response to salicylic acid stimulus	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_02461	A	A1S	Potri.001G235600	Potri.001G235600(AS)	POPTR_0001s24230	sp|P10978|POLX_TOBAC	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1	NA	NA	LOC_Os06g47070.1	protein|retrotransposon protein, putative, unclassified, expressed	IMGA|Medtr5g035290.1	Cc-nbs-lrr resistance protein chr5 14930516-14924004 H EGN_Mt100125 20111014	NA	NA	NA
pt2_02462	A	A1S	Potri.001G235700	Potri.001G235700(AS)	POPTR_0001s24240	NA	NA	AT5G59790.1	| Symbols: | Domain of unknown function (DUF966) | chr5:24090950-24092804 FORWARD LENGTH=423	LOC_Os01g62200.1	protein|domain of unknown function DUF966 domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02463	A	A1S	Potri.001G235800	Potri.001G235800(AS)	POPTR_0001s24250	sp|Q9SLD4|ZAT11_ARATH	Zinc finger protein ZAT11 OS=Arabidopsis thaliana GN=ZAT11 PE=2 SV=1	AT2G37430.1	| Symbols: | C2H2 and C2HC zinc fingers superfamily protein | chr2:15706454-15706990 FORWARD LENGTH=178	LOC_Os03g17150.1	protein|ZOS3-09 - C2H2 zinc finger protein, expressed	IMGA|Medtr1g106730.1	Zinc finger protein chr1 31397508-31398593 F EGN_Mt100125 20111014	GO:0002679|respiratory burst involved in defense response GO:0006355|regulation of transcription, DNA-dependent GO:0009693|ethylene biosynthetic process GO:0010200|response to chitin GO:0035556|intracellular signal transduction	GO:0003676|nucleic acid binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_02464	A	A1S	Potri.001G235900	Potri.001G235900(AS)	POPTR_0001s24270	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02465	A	A1S	Potri.001G236000	Potri.001G236000(AS)	POPTR_0001s24280	NA	NA	AT5G59830.2	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13660.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr5:24105423-24107071 FORWARD LENGTH=425	LOC_Os03g17050.1	protein|expressed protein	NA	NA	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0008150|biological_process GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process GO:0048573|photoperiodism, flowering	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02466	A	A1S	Potri.001G236000	Potri.001G236000(AS)	POPTR_0001s24280	NA	NA	AT5G59830.2	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13660.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr5:24105423-24107071 FORWARD LENGTH=425	LOC_Os03g17050.1	protein|expressed protein	NA	NA	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0008150|biological_process GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process GO:0048573|photoperiodism, flowering	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02467	A	A2S	Potri.001G236100	Potri.001G236100(AS) Potri.009G027900(DS)	POPTR_0001s24290	sp|P28186|RAE1C_ARATH	Ras-related protein RABE1c OS=Arabidopsis thaliana GN=RABE1C PE=1 SV=1	AT5G59840.1	| Symbols: | Ras-related small GTP-binding family protein | chr5:24107450-24109049 REVERSE LENGTH=216	LOC_Os07g13530.1	protein|ras-related protein, putative, expressed	IMGA|Medtr1g068730.1	Ras-like protein chr1 17072901-17066690 F EGN_Mt100125 20111014	GO:0006007|glucose catabolic process GO:0007264|small GTPase mediated signal transduction GO:0009873|ethylene mediated signaling pathway GO:0015031|protein transport GO:0042732|D-xylose metabolic process	GO:0005515|protein binding GO:0005525|GTP binding	GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_02468	R	R	NA	NA	POPTR_0001s24300	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02469	A	A1S	Potri.001G236200	Potri.001G236200(AS)	POPTR_0001s24300	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005575|cellular_component
pt2_02470	C	C1S	Potri.001G236300	Potri.001G236300(CS)	sp|Q9SVM8|GRP2_ARATH	Glycine-rich RNA-binding protein 2, mitochondrial OS=Arabidopsis thaliana GN=GRP2 PE=1 SV=1	AT4G13850.4	| Symbols: ATGRP2 | glycine-rich RNA-binding protein 2 | chr4:8021314-8022065 FORWARD LENGTH=129	LOC_Os01g74340.1	protein|RNA recognition motif containing protein, putative, expressed	IMGA|Medtr1g092860.1	RNA-binding protein chr1 25969148-25965992 F EGN_Mt100125 20111014	GO:0006364|rRNA processing GO:0006970|response to osmotic stress GO:0009651|response to salt stress GO:0009664|plant-type cell wall organization GO:0042545|cell wall modification	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003690|double-stranded DNA binding GO:0003697|single-stranded DNA binding GO:0003723|RNA binding	GO:0005739|mitochondrion
pt2_02471	A	A1S	Potri.001G236300	Potri.001G236300(AS)	POPTR_0001s24310	sp|Q9SVM8|GRP2_ARATH	Glycine-rich RNA-binding protein 2, mitochondrial OS=Arabidopsis thaliana GN=GRP2 PE=1 SV=1	AT4G13850.4	| Symbols: ATGRP2 | glycine-rich RNA-binding protein 2 | chr4:8021314-8022065 FORWARD LENGTH=129	LOC_Os01g74340.1	protein|RNA recognition motif containing protein, putative, expressed	IMGA|Medtr1g092860.1	RNA-binding protein chr1 25969148-25965992 F EGN_Mt100125 20111014	GO:0006364|rRNA processing GO:0006970|response to osmotic stress GO:0009651|response to salt stress GO:0009664|plant-type cell wall organization GO:0042545|cell wall modification	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003690|double-stranded DNA binding GO:0003697|single-stranded DNA binding GO:0003723|RNA binding	GO:0005739|mitochondrion
pt2_02472	A	A1S	Potri.001G236300	Potri.001G236300(AS)	POPTR_0001s24310	sp|Q9SVM8|GRP2_ARATH	Glycine-rich RNA-binding protein 2, mitochondrial OS=Arabidopsis thaliana GN=GRP2 PE=1 SV=1	AT4G13850.4	| Symbols: ATGRP2 | glycine-rich RNA-binding protein 2 | chr4:8021314-8022065 FORWARD LENGTH=129	LOC_Os01g74340.1	protein|RNA recognition motif containing protein, putative, expressed	IMGA|Medtr1g092860.1	RNA-binding protein chr1 25969148-25965992 F EGN_Mt100125 20111014	GO:0006364|rRNA processing GO:0006970|response to osmotic stress GO:0009651|response to salt stress GO:0009664|plant-type cell wall organization GO:0042545|cell wall modification	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003690|double-stranded DNA binding GO:0003697|single-stranded DNA binding GO:0003723|RNA binding	GO:0005739|mitochondrion
pt2_02473	A	A6S	Potri.001G236400	Potri.001G236400(AS) Potri.008G052100(DS) Potri.001G236500(DS) Potri.001G236700(DS) Potri.009G028200(DS) Potri.009G028100(DS)	POPTR_0001s24320	sp|Q9FVI1|ADF2_PETHY	Actin-depolymerizing factor 2 OS=Petunia hybrida GN=ADF2 PE=2 SV=1	AT3G46000.1	| Symbols: ADF2 | actin depolymerizing factor 2 | chr3:16907743-16908822 REVERSE LENGTH=137	LOC_Os02g44470.1	protein|actin-depolymerizing factor, putative, expressed	IMGA|Medtr5g010430.1	Actin depolymerizing factor chr5 2553660-2554177 H EGN_Mt100125 20111014	GO:0007015|actin filament organization GO:0009870|defense response signaling pathway, resistance gene-dependent GO:0030042|actin filament depolymerization GO:0042742|defense response to bacterium	GO:0003779|actin binding	GO:0005622|intracellular GO:0005737|cytoplasm GO:0009507|chloroplast
pt2_02474	A	A5S	Potri.001G236500	Potri.001G236500(AS) Potri.001G236700(AS) Potri.001G236400(DS) Potri.009G028200(DS) Potri.009G028100(DS)	POPTR_0001s24330	sp|Q9FVI1|ADF2_PETHY	Actin-depolymerizing factor 2 OS=Petunia hybrida GN=ADF2 PE=2 SV=1	AT5G59890.1	| Symbols: ADF4, ATADF4 | actin depolymerizing factor 4 | chr5:24122545-24123596 FORWARD LENGTH=139	LOC_Os02g44470.1	protein|actin-depolymerizing factor, putative, expressed	IMGA|Medtr5g010430.1	Actin depolymerizing factor chr5 2553660-2554177 H EGN_Mt100125 20111014	GO:0009870|defense response signaling pathway, resistance gene-dependent GO:0042742|defense response to bacterium	GO:0003779|actin binding	GO:0005622|intracellular GO:0005737|cytoplasm
pt2_02475	A	A1S	Potri.001G236800	Potri.001G236800(AS)	POPTR_0001s24340	sp|Q9FJE6|PP437_ARATH	Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1	AT5G59900.1	| Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr5:24123983-24126706 REVERSE LENGTH=907	LOC_Os01g06000.1	protein|PPR repeat containing protein, expressed	IMGA|Medtr5g090210.1	Pentatricopeptide repeat-containing protein chr5 38260030-38262180 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_02476	A	A1S	Potri.001G236900	Potri.001G236900(AS)	POPTR_0001s24350	sp|Q9JJW6|REFP2_MOUSE	RNA and export factor-binding protein 2 OS=Mus musculus GN=Refbp2 PE=1 SV=1	AT5G59950.4	| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr5:24140235-24141410 FORWARD LENGTH=211	LOC_Os03g17010.1	protein|RNA recognition motif containing protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding	GO:0005634|nucleus
pt2_02477	A	A1S	Potri.001G237000	Potri.001G237000(AS)	POPTR_0001s24360	NA	NA	AT5G59960.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:24142352-24145140 REVERSE LENGTH=359	LOC_Os01g05830.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005739|mitochondrion GO:0005783|endoplasmic reticulum
pt2_02478	A	A1S	Potri.001G237100	Potri.001G237100(AS)	POPTR_0001s24370	NA	NA	AT2G39570.1	| Symbols: | ACT domain-containing protein | chr2:16507963-16509741 FORWARD LENGTH=411	LOC_Os05g02220.3	protein|ACT domain containing protein, expressed	NA	NA	GO:0008152|metabolic process GO:0009744|response to sucrose stimulus GO:0009750|response to fructose stimulus	GO:0016597|amino acid binding	GO:0005634|nucleus
pt2_02479	A	A1S	Potri.001G237200	Potri.001G237200(AS)	POPTR_0001s24380	sp|Q8NBZ7|UXS1_HUMAN	UDP-glucuronic acid decarboxylase 1 OS=Homo sapiens GN=UXS1 PE=1 SV=1	AT3G46440.2	| Symbols: UXS5 | UDP-XYL synthase 5 | chr3:17089268-17091611 REVERSE LENGTH=341	LOC_Os03g16980.1	protein|NAD dependent epimerase/dehydratase family domain containing protein, expressed	IMGA|contig_164943_1.1	Dtdp-glucose 4 6-dehydratase contig_164943 3364-208 F PREDN 20111014	GO:0009225|nucleotide-sugar metabolic process GO:0009744|response to sucrose stimulus GO:0009749|response to glucose stimulus GO:0009750|response to fructose stimulus GO:0042732|D-xylose metabolic process GO:0044237|cellular metabolic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0048040|UDP-glucuronate decarboxylase activity GO:0050662|coenzyme binding	GO:0005829|cytosol GO:0005886|plasma membrane
pt2_02480	A	A1S	Potri.001G237300	Potri.001G237300(AS)	POPTR_0001s24390	NA	NA	AT2G28780.1	| Symbols: | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: inflorescence meristem, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF939, bacterial (InterPro:IPR010343); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G09450.1); Has 671 Blast hits to 667 proteins in 305 species: Archae - 0; Bacteria - 588; Metazoa - 0; Fungi - 2; Plants - 66; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). | chr2:12340099-12343281 REVERSE LENGTH=796	LOC_Os12g01020.1	protein|expressed protein	NA	NA	GO:0008150|biological_process GO:0009734|auxin mediated signaling pathway	NA	GO:0005886|plasma membrane
pt2_02481	A	A1S	Potri.001G237400	Potri.001G237400(AS)	POPTR_0001s24400	NA	NA	AT3G46450.1	| Symbols: | SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein | chr3:17093297-17095319 REVERSE LENGTH=486	LOC_Os03g60610.1	protein|SEC14 cytosolic factor family protein, putative, expressed	NA	NA	GO:0006810|transport GO:0010228|vegetative to reproductive phase transition of meristem GO:0016926|protein desumoylation GO:0050665|hydrogen peroxide biosynthetic process	GO:0005215|transporter activity	GO:0005634|nucleus GO:0005739|mitochondrion
pt2_02482	A	A1S	Potri.001G237400	Potri.001G237400(AS)	POPTR_0001s24410	NA	NA	AT3G46450.1	| Symbols: | SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein | chr3:17093297-17095319 REVERSE LENGTH=486	LOC_Os03g60610.1	protein|SEC14 cytosolic factor family protein, putative, expressed	NA	NA	GO:0006810|transport GO:0010228|vegetative to reproductive phase transition of meristem GO:0016926|protein desumoylation GO:0050665|hydrogen peroxide biosynthetic process	GO:0005215|transporter activity	GO:0005634|nucleus GO:0005739|mitochondrion
pt2_02483	A	A1S	Potri.001G237400	Potri.001G237400(AS)	POPTR_0001s24410	NA	NA	AT3G46450.1	| Symbols: | SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein | chr3:17093297-17095319 REVERSE LENGTH=486	LOC_Os03g60610.1	protein|SEC14 cytosolic factor family protein, putative, expressed	NA	NA	GO:0006810|transport GO:0010228|vegetative to reproductive phase transition of meristem GO:0016926|protein desumoylation GO:0050665|hydrogen peroxide biosynthetic process	GO:0005215|transporter activity	GO:0005634|nucleus GO:0005739|mitochondrion
pt2_02484	C	C1S	Potri.001G237400	Potri.001G237400(CS)	NA	NA	AT3G46450.1	| Symbols: | SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein | chr3:17093297-17095319 REVERSE LENGTH=486	LOC_Os03g60610.1	protein|SEC14 cytosolic factor family protein, putative, expressed	NA	NA	GO:0006810|transport GO:0010228|vegetative to reproductive phase transition of meristem GO:0016926|protein desumoylation GO:0050665|hydrogen peroxide biosynthetic process	GO:0005215|transporter activity	GO:0005634|nucleus GO:0005739|mitochondrion
pt2_02485	A	A1S	Potri.001G237500	Potri.001G237500(AS)	POPTR_0001s24420	NA	NA	AT1G07645.1	| Symbols: ATDSI-1VOC, DSI-1VOC | dessication-induced 1VOC superfamily protein | chr1:2367612-2368349 REVERSE LENGTH=137	LOC_Os03g16940.1	protein|glyoxalase family protein, putative, expressed	NA	NA	NA	GO:0003824|catalytic activity	GO:0005576|extracellular region
pt2_02486	A	A2S	Potri.001G237600	Potri.001G237600(AS) Potri.009G028800(DS)	POPTR_0001s24430	sp|Q41350|OLP1_SOLLC	Osmotin-like protein OS=Solanum lycopersicum PE=1 SV=1	AT2G28790.1	| Symbols: | Pathogenesis-related thaumatin superfamily protein | chr2:12354664-12355413 REVERSE LENGTH=249	LOC_Os01g62260.1	protein|thaumatin, putative, expressed	IMGA|Medtr5g022310.1	Thaumatin-like protein chr5 8540196-8542249 F EGN_Mt100125 20111014	GO:0009664|plant-type cell wall organization GO:0042545|cell wall modification GO:0051707|response to other organism	GO:0003674|molecular_function	GO:0005576|extracellular region GO:0009505|plant-type cell wall GO:0009506|plasmodesma
pt2_02487	A	A2S	Potri.001G237700	Potri.001G237700(AS) Potri.009G029000(DS)	POPTR_0001s24440	NA	NA	AT5G59305.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:23923232-23923679 FORWARD LENGTH=76	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_02488	A	A3S	Potri.001G237800	Potri.001G237800(AS) Potri.001G237700(AA) Potri.009G029100(DS)	POPTR_0001s24450	sp|Q9FY06|PPF1_PEA	Inner membrane protein PPF-1, chloroplastic OS=Pisum sativum GN=PPF-1 PE=2 SV=2	AT2G28800.1	| Symbols: ALB3 | 63 kDa inner membrane family protein | chr2:12356669-12359158 REVERSE LENGTH=462	LOC_Os01g05800.1	protein|inner membrane protein, putative, expressed	NA	NA	GO:0006364|rRNA processing GO:0009902|chloroplast relocation GO:0010027|thylakoid membrane organization GO:0010207|photosystem II assembly GO:0034660|ncRNA metabolic process GO:0035304|regulation of protein dephosphorylation GO:0042744|hydrogen peroxide catabolic process GO:0042793|transcription from plastid promoter GO:0045038|protein import into chloroplast thylakoid membrane GO:0045893|positive regulation of transcription, DNA-dependent GO:0051205|protein insertion into membrane GO:0090342|regulation of cell aging	GO:0005515|protein binding GO:0015450|P-P-bond-hydrolysis-driven protein transmembrane transporter activity	GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0016020|membrane
pt2_02489	A	A1S	Potri.001G237900	Potri.001G237900(AS)	POPTR_0001s24470	sp|Q6X7K1|WOX2_ARATH	WUSCHEL-related homeobox 2 OS=Arabidopsis thaliana GN=WOX2 PE=2 SV=1	AT5G59340.1	| Symbols: WOX2 | WUSCHEL related homeobox 2 | chr5:23933408-23934627 REVERSE LENGTH=260	LOC_Os01g62310.1	protein|homeobox domain containing protein, expressed	IMGA|Medtr5g081990.1	WUSCHEL-related homeobox chr5 34173373-34172481 F EGN_Mt100125 20111014	GO:0008284|positive regulation of cell proliferation GO:0009880|embryonic pattern specification GO:0009942|longitudinal axis specification GO:0010654|apical cell fate commitment GO:0048825|cotyledon development GO:0080167|response to karrikin GO:0090451|cotyledon boundary formation	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_02490	B	B15S	Potri.014G026000	Potri.014G026000(BS) Potri.003G006700(BS) Potri.T098000(BS) Potri.012G066500(BS) Potri.005G163200(BS) Potri.001G393500(BS) Potri.017G062600(BS) Potri.001G238000(BS) Potri.001G278700(BS) Potri.018G075600(BS) Potri.010G026700(DS) Potri.001G297800(DS) Potri.001G256500(DS) Potri.002G200700(DS) Potri.001G402200(DS)	POPTR_0001s24480	NA	NA	AT5G05800.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 881 Blast hits to 512 proteins in 30 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 38; Plants - 833; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). | chr5:1743234-1744751 REVERSE LENGTH=449	LOC_Os12g10550.1	protein|transposon protein, putative, CACTA, En/Spm sub-class, expressed	IMGA|Medtr5g054570.1	PIF-like protein chr5 21936286-21937344 H EGN_Mt100125 20111014	GO:0008150|biological_process GO:0048573|photoperiodism, flowering	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_02491	B	B6S	Potri.018G075700	Potri.018G075700(BS) Potri.003G006600(BS) Potri.005G163100(DS) Potri.002G213700(DS) Potri.004G118300(DS) Potri.001G393600(DS)	POPTR_0001s24490	NA	NA	AT4G10890.1	| Symbols: | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2439 (InterPro:IPR018838); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:6688833-6692937 FORWARD LENGTH=527	ChrUn.fgenesh.mRNA.24	protein|hypothetical protein	IMGA|Medtr1g059320.1	hypothetical protein chr1 15361664-15360985 H EGN_Mt100125 20111014	NA	GO:0003674|molecular_function GO:0016788|hydrolase activity, acting on ester bonds	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02492	G	G1	NA	NA	POPTR_0001s24500	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02493	A	A1S	Potri.001G238200	Potri.001G238200(AS)	POPTR_0001s24510	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_02494	A	A1S	Potri.001G238300	Potri.001G238300(AS)	POPTR_0001s24520	NA	NA	AT5G59350.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:23941132-23941995 FORWARD LENGTH=287	LOC_Os11g47730.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_02495	R	R	NA	NA	POPTR_0001s24530	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02496	A	A1S	Potri.001G238400	Potri.001G238400(AS)	POPTR_0001s24540	sp|Q9M2U1|DOF36_ARATH	Dof zinc finger protein DOF3.6 OS=Arabidopsis thaliana GN=DOF3.6 PE=1 SV=2	AT3G55370.1	| Symbols: OBP3 | OBF-binding protein 3 | chr3:20527198-20528876 FORWARD LENGTH=323	LOC_Os03g16850.1	protein|dof zinc finger domain containing protein, putative, expressed	IMGA|contig_99303_1.1	Dof zinc finger protein contig_99303 304-1771 F PREDN 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009640|photomorphogenesis GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_02497	A	A1S	Potri.001G238500	Potri.001G238500(AS)	POPTR_0001s24550	sp|Q9SNC6|PUB13_ARATH	U-box domain-containing protein 13 OS=Arabidopsis thaliana GN=PUB13 PE=1 SV=1	AT3G46510.1	| Symbols: PUB13, ATPUB13 | plant U-box 13 | chr3:17124106-17126539 REVERSE LENGTH=660	LOC_Os03g16824.1	protein|spotted leaf 11, putative, expressed	IMGA|Medtr5g083030.1	U-box domain-containing protein chr5 34808238-34811295 E EGN_Mt100125 20111014	GO:0000902|cell morphogenesis GO:0006487|protein N-linked glycosylation GO:0006499|N-terminal protein myristoylation GO:0016049|cell growth GO:0016567|protein ubiquitination GO:0032880|regulation of protein localization GO:0042742|defense response to bacterium GO:0046777|protein autophosphorylation GO:0048193|Golgi vesicle transport GO:0048767|root hair elongation	GO:0004842|ubiquitin-protein ligase activity GO:0005515|protein binding GO:0070696|transmembrane receptor protein serine/threonine kinase binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol
pt2_02498	A	A1S	Potri.001G238700	Potri.001G238700(AS)	POPTR_0001s24560	sp|P27880|HSP12_MEDSA	18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1	AT1G53540.1	| Symbols: | HSP20-like chaperones superfamily protein | chr1:19980510-19980983 FORWARD LENGTH=157	LOC_Os01g04380.1	protein|hsp20/alpha crystallin family protein, putative, expressed	IMGA|Medtr5g081530.1	18.2 kDa class I heat shock protein chr5 33907234-33907931 F EGN_Mt100125 20111014	GO:0006457|protein folding GO:0009408|response to heat GO:0009644|response to high light intensity GO:0034976|response to endoplasmic reticulum stress GO:0042542|response to hydrogen peroxide	NA	GO:0005737|cytoplasm
pt2_02499	A	A1S	Potri.001G238800	Potri.001G238800(AS)	POPTR_0001s24570	sp|Q94B55|XB31_ARATH	Putative E3 ubiquitin-protein ligase XBAT31 OS=Arabidopsis thaliana GN=XBAT31 PE=2 SV=1	AT2G28840.1	| Symbols: XBAT31 | XB3 ortholog 1 in Arabidopsis thaliana | chr2:12378542-12380474 FORWARD LENGTH=456	LOC_Os05g02130.1	protein|ankyrin repeat domain-containing protein 28, putative, expressed	IMGA|Medtr5g023090.1	Ankyrin repeat domain-containing protein chr5 8915030-8919298 E EGN_Mt100125 20111014	GO:0051049|regulation of transport	GO:0008270|zinc ion binding	GO:0005737|cytoplasm
pt2_02500	A	A2S	Potri.001G238900	Potri.001G238900(AS) Potri.009G030100(DS)	POPTR_0001s24580	NA	NA	AT5G02440.1	| Symbols: | unknown protein; Has 71 Blast hits to 71 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:531066-532725 FORWARD LENGTH=176	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_02501	R	R	NA	NA	POPTR_0001s24590	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02502	A	A1S	Potri.001G239100	Potri.001G239100(AS)	POPTR_0001s24600	sp|Q8GUH1|PUB33_ARATH	U-box domain-containing protein 33 OS=Arabidopsis thaliana GN=PUB33 PE=2 SV=2	AT2G45910.1	| Symbols: | U-box domain-containing protein kinase family protein | chr2:18894520-18898212 FORWARD LENGTH=834	LOC_Os09g39640.1	protein|protein kinase, putative, expressed	IMGA|Medtr1g100820.1	U-box domain-containing protein chr1 29460239-29454831 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006950|response to stress GO:0016567|protein ubiquitination	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004842|ubiquitin-protein ligase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0000151|ubiquitin ligase complex GO:0005886|plasma membrane
pt2_02503	B	B1S	Potri.001G239200	Potri.001G239200(BS)	POPTR_0001s24610	sp|A7Z035|EPN4_BOVIN	Clathrin interactor 1 OS=Bos taurus GN=CLINT1 PE=2 SV=1	AT3G46540.1	| Symbols: | ENTH/VHS family protein | chr3:17134204-17135411 REVERSE LENGTH=307	LOC_Os01g62370.1	protein|ENTH domain containing protein, expressed	IMGA|Medtr1g075760.1	Epsin-2 chr1 19302561-19301051 H EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005575|cellular_component
pt2_02504	A	A1S	Potri.001G239300	Potri.001G239300(AS)	POPTR_0001s24620	sp|Q9ZV25|P2C23_ARATH	Probable protein phosphatase 2C 23 OS=Arabidopsis thaliana GN=PLL4 PE=2 SV=1	AT2G28890.1	| Symbols: PLL4 | poltergeist like 4 | chr2:12405799-12408062 REVERSE LENGTH=654	LOC_Os03g60650.1	protein|protein phosphatase 2C, putative, expressed	IMGA|contig_113959_1.1	Protein phosphatase 2C contig_113959 455-2236 E PREDN 20111014	GO:0006499|N-terminal protein myristoylation GO:0006857|oligopeptide transport GO:0010359|regulation of anion channel activity GO:0048366|leaf development	GO:0003824|catalytic activity GO:0004722|protein serine/threonine phosphatase activity	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_02505	A	A1S	Potri.001G239300	Potri.001G239300(AS)	POPTR_0001s24620	sp|Q9ZV25|P2C23_ARATH	Probable protein phosphatase 2C 23 OS=Arabidopsis thaliana GN=PLL4 PE=2 SV=1	AT2G28890.1	| Symbols: PLL4 | poltergeist like 4 | chr2:12405799-12408062 REVERSE LENGTH=654	LOC_Os03g60650.1	protein|protein phosphatase 2C, putative, expressed	IMGA|contig_113959_1.1	Protein phosphatase 2C contig_113959 455-2236 E PREDN 20111014	GO:0006499|N-terminal protein myristoylation GO:0006857|oligopeptide transport GO:0010359|regulation of anion channel activity GO:0048366|leaf development	GO:0003824|catalytic activity GO:0004722|protein serine/threonine phosphatase activity	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_02506	A	A1S	Potri.001G239500	Potri.001G239500(AS)	POPTR_0001s24630	NA	NA	AT5G02390.1	| Symbols: | Protein of unknown function (DUF3741) | chr5:508764-511710 REVERSE LENGTH=835	LOC_Os12g38260.1	protein|expressed protein	NA	NA	GO:0048235|pollen sperm cell differentiation	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_02507	A	A2S	Potri.001G239600	Potri.001G239600(AS) Potri.T181700(AS)	POPTR_0001s24650	sp|B7GIR2|OBG_ANOFW	GTPase obg OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=obg PE=3 SV=1	AT1G07615.1	| Symbols: | GTP-binding protein Obg/CgtA | chr1:2342277-2344200 REVERSE LENGTH=493	LOC_Os11g47800.1	protein|spo0B-associated GTP-binding protein, putative, expressed	IMGA|Medtr1g073010.1	GTPase obg chr1 18466009-18463442 E EGN_Mt100125 20111014	NA	GO:0000287|magnesium ion binding GO:0003924|GTPase activity GO:0005525|GTP binding	GO:0005737|cytoplasm
pt2_02508	A	A1S	Potri.001G239700	Potri.001G239700(AS)	POPTR_0001s24660	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02509	A	A1S	Potri.001G239900	Potri.001G239900(AS)	POPTR_0001s24670	sp|Q41050|OEP16_PEA	Outer envelope pore protein 16, chloroplastic OS=Pisum sativum GN=OEP16 PE=1 SV=1	AT2G28900.1	| Symbols: OEP16, ATOEP16-L, ATOEP16-1, OEP16-1 | outer plastid envelope protein 16-1 | chr2:12414423-12415459 REVERSE LENGTH=148	LOC_Os05g02060.1	protein|mitochondrial import inner membrane translocase subunit Tim17, putative, expressed	NA	NA	GO:0009409|response to cold GO:0009611|response to wounding GO:0009744|response to sucrose stimulus GO:0009749|response to glucose stimulus GO:0009753|response to jasmonic acid stimulus GO:0015031|protein transport GO:0042742|defense response to bacterium GO:0045037|protein import into chloroplast stroma	GO:0015171|amino acid transmembrane transporter activity GO:0015450|P-P-bond-hydrolysis-driven protein transmembrane transporter activity	GO:0005773|vacuole GO:0009507|chloroplast GO:0009527|plastid outer membrane GO:0009536|plastid GO:0009707|chloroplast outer membrane GO:0009941|chloroplast envelope
pt2_02510	A	A1S	Potri.001G240000	Potri.001G240000(AS)	POPTR_0001s24680	sp|P52409|E13B_WHEAT	Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1	AT5G24318.1	| Symbols: | O-Glycosyl hydrolases family 17 protein | chr5:8282285-8283956 REVERSE LENGTH=458	LOC_Os11g47820.1	protein|glucan endo-1,3-beta-glucosidase precursor, putative, expressed	IMGA|Medtr5g085580.1	"Glucan endo-1,3-beta-glucosidase" chr5 35975309-35973056 F EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0043169|cation binding	GO:0005576|extracellular region
pt2_02511	A	A1S	Potri.001G240100	Potri.001G240100(AS)	POPTR_0001s24690	sp|Q9SNC0|MBD5_ARATH	Methyl-CpG-binding domain-containing protein 5 OS=Arabidopsis thaliana GN=MBD5 PE=1 SV=1	AT3G46580.1	| Symbols: MBD05, MBD5, ATMBD5 | methyl-CPG-binding domain protein 5 | chr3:17148397-17149328 FORWARD LENGTH=182	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003677|DNA binding GO:0005515|protein binding GO:0008327|methyl-CpG binding GO:0019899|enzyme binding GO:0043621|protein self-association	GO:0005634|nucleus GO:0005720|nuclear heterochromatin GO:0010370|perinucleolar chromocenter
pt2_02512	A	A1S	Potri.001G240100	Potri.001G240100(AS)	POPTR_0001s24690	sp|Q9SNC0|MBD5_ARATH	Methyl-CpG-binding domain-containing protein 5 OS=Arabidopsis thaliana GN=MBD5 PE=1 SV=1	AT3G46580.1	| Symbols: MBD05, MBD5, ATMBD5 | methyl-CPG-binding domain protein 5 | chr3:17148397-17149328 FORWARD LENGTH=182	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003677|DNA binding GO:0005515|protein binding GO:0008327|methyl-CpG binding GO:0019899|enzyme binding GO:0043621|protein self-association	GO:0005634|nucleus GO:0005720|nuclear heterochromatin GO:0010370|perinucleolar chromocenter
pt2_02513	A	A1S	Potri.001G240100	Potri.001G240100(AS)	POPTR_0001s24690	sp|Q9SNC0|MBD5_ARATH	Methyl-CpG-binding domain-containing protein 5 OS=Arabidopsis thaliana GN=MBD5 PE=1 SV=1	AT3G46580.1	| Symbols: MBD05, MBD5, ATMBD5 | methyl-CPG-binding domain protein 5 | chr3:17148397-17149328 FORWARD LENGTH=182	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003677|DNA binding GO:0005515|protein binding GO:0008327|methyl-CpG binding GO:0019899|enzyme binding GO:0043621|protein self-association	GO:0005634|nucleus GO:0005720|nuclear heterochromatin GO:0010370|perinucleolar chromocenter
pt2_02514	A	A1S	Potri.001G240100	Potri.001G240100(AS)	POPTR_0001s24690	sp|Q9SNC0|MBD5_ARATH	Methyl-CpG-binding domain-containing protein 5 OS=Arabidopsis thaliana GN=MBD5 PE=1 SV=1	AT3G46580.1	| Symbols: MBD05, MBD5, ATMBD5 | methyl-CPG-binding domain protein 5 | chr3:17148397-17149328 FORWARD LENGTH=182	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003677|DNA binding GO:0005515|protein binding GO:0008327|methyl-CpG binding GO:0019899|enzyme binding GO:0043621|protein self-association	GO:0005634|nucleus GO:0005720|nuclear heterochromatin GO:0010370|perinucleolar chromocenter
pt2_02515	A	A1S	Potri.001G240200	Potri.001G240200(AS)	POPTR_0001s24700	sp|Q9LJ98|PFD2_ARATH	Probable prefoldin subunit 2 OS=Arabidopsis thaliana GN=At3g22480 PE=2 SV=1	AT3G22480.1	| Symbols: PDF2 | prefoldin 2 | chr3:7969080-7969526 FORWARD LENGTH=148	LOC_Os12g30060.2	protein|prefoldin subunit, putative, expressed	NA	NA	GO:0006457|protein folding	GO:0051082|unfolded protein binding	GO:0005737|cytoplasm GO:0016272|prefoldin complex
pt2_02516	A	A1S	Potri.001G240300	Potri.001G240300(AS)	POPTR_0001s24710	sp|P21820|TPIS_COPJA	Triosephosphate isomerase, cytosolic OS=Coptis japonica PE=2 SV=1	AT3G55440.1	| Symbols: ATCTIMC, TPI, CYTOTPI | triosephosphate isomerase | chr3:20553794-20556078 FORWARD LENGTH=254	LOC_Os01g05490.1	protein|triosephosphate isomerase, cytosolic, putative, expressed	NA	NA	GO:0006094|gluconeogenesis GO:0006096|glycolysis GO:0006098|pentose-phosphate shunt GO:0006511|ubiquitin-dependent protein catabolic process GO:0006833|water transport GO:0006972|hyperosmotic response GO:0007030|Golgi organization GO:0008152|metabolic process GO:0009060|aerobic respiration GO:0009266|response to temperature stimulus GO:0009651|response to salt stress GO:0009853|photorespiration GO:0010043|response to zinc ion GO:0018119|peptidyl-cysteine S-nitrosylation GO:0019344|cysteine biosynthetic process GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0044262|cellular carbohydrate metabolic process GO:0046686|response to cadmium ion GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	GO:0003824|catalytic activity GO:0004807|triose-phosphate isomerase activity GO:0005507|copper ion binding	GO:0005618|cell wall GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005829|cytosol GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0048046|apoplast
pt2_02517	A	A1S	Potri.001G240400	Potri.001G240400(AS)	POPTR_0001s24720	sp|Q06548|APK1A_ARATH	Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1	AT1G07570.1	| Symbols: APK1A, APK1 | Protein kinase superfamily protein | chr1:2331369-2333210 REVERSE LENGTH=410	LOC_Os03g60710.1	protein|protein kinase domain containing protein, expressed	IMGA|Medtr5g079840.1	Serine/threonine protein kinase chr5 33137301-33139864 F EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006499|N-terminal protein myristoylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_02518	A	A2S	Potri.001G240500	Potri.001G240500(AS) Potri.009G031500(DS)	POPTR_0001s24730	sp|Q9LTC0|Y5707_ARATH	Probable receptor-like protein kinase At5g47070 OS=Arabidopsis thaliana GN=At5g47070 PE=1 SV=1	AT2G28940.2	| Symbols: | Protein kinase superfamily protein | chr2:12426853-12428678 REVERSE LENGTH=462	LOC_Os02g57420.1	protein|protein kinase APK1A, chloroplast precursor, putative, expressed	IMGA|Medtr5g013610.1	NAK-type protein kinase chr5 4102763-4105060 F EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_02519	A	A1S	Potri.001G240600	Potri.001G240600(AS)	POPTR_0001s24740	sp|P13917|7SB1_SOYBN	Basic 7S globulin OS=Glycine max GN=BG PE=1 SV=2	AT1G03230.1	| Symbols: | Eukaryotic aspartyl protease family protein | chr1:790110-791414 FORWARD LENGTH=434	LOC_Os05g33410.1	protein|xylanase inhibitor, putative, expressed	IMGA|contig_70142_1.1	Xylanase inhibitor contig_70142 1771-479 E PREDN 20111014	GO:0006508|proteolysis GO:0009651|response to salt stress	GO:0004190|aspartic-type endopeptidase activity	GO:0005576|extracellular region GO:0005618|cell wall GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0009505|plant-type cell wall
pt2_02520	A	A1S	Potri.001G240700	Potri.001G240700(AS)	POPTR_0001s24750	NA	NA	AT3G48670.2	| Symbols: IDN2, RDM12 | XH/XS domain-containing protein | chr3:18031240-18033615 FORWARD LENGTH=647	LOC_Os01g44230.1	protein|transcription factor X1, putative, expressed	IMGA|Medtr5g079940.1	Transcription factor X1-like protein chr5 33186502-33193428 E EGN_Mt100125 20111014	GO:0048451|petal formation GO:0048453|sepal formation GO:0080188|RNA-directed DNA methylation	GO:0003674|molecular_function	NA
pt2_02521	A	A1S	Potri.001G240900	Potri.001G240900(AS)	POPTR_0001s24760	sp|O48818|EXPA4_ARATH	Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1	AT2G39700.1	| Symbols: ATEXPA4, ATEXP4, ATHEXP ALPHA 1.6, EXPA4 | expansin A4 | chr2:16544246-16545434 REVERSE LENGTH=257	LOC_Os03g60720.1	protein|expansin precursor, putative, expressed	IMGA|Medtr5g079950.1	Expansin chr5 33196713-33195638 E EGN_Mt100125 20111014	GO:0006949|syncytium formation GO:0009664|plant-type cell wall organization GO:0009826|unidimensional cell growth GO:0009828|plant-type cell wall loosening GO:0009831|plant-type cell wall modification involved in multidimensional cell growth	NA	GO:0005576|extracellular region GO:0005829|cytosol GO:0009505|plant-type cell wall GO:0009506|plasmodesma
pt2_02522	A	A1S	Potri.001G241000	Potri.001G241000(AS)	POPTR_0001s24770	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02523	G	G1	NA	NA	POPTR_0001s24780	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02524	A	A1S	Potri.001G241200	Potri.001G241200(AS)	POPTR_0001s24790	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_02525	A	A1S	Potri.001G241300	Potri.001G241300(AS)	POPTR_0001s24800	sp|Q6GMF8|RHDF1_DANRE	Inactive rhomboid protein 1 OS=Danio rerio GN=rhbdf1 PE=2 SV=1	AT2G29050.1	| Symbols: ATRBL1, RBL1 | RHOMBOID-like 1 | chr2:12478245-12480121 FORWARD LENGTH=389	LOC_Os11g47840.1	protein|OsRhmbd18 - Putative Rhomboid homologue, expressed	IMGA|contig_69015_1.1	Rhomboid family protein expressed contig_69015 1651-2320 H PREDN 20111014	GO:0006508|proteolysis	GO:0004252|serine-type endopeptidase activity	GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0016021|integral to membrane
pt2_02526	A	A1S	Potri.001G241400	Potri.001G241400(AS)	POPTR_0001s24810	sp|Q8GYC7|PGL1B_ARATH	PGR5-like protein 1B, chloroplastic OS=Arabidopsis thaliana GN=PGRL1B PE=1 SV=1	AT5G59400.1	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: PGR5-like B (TAIR:AT4G11960.1); Has 97 Blast hits to 97 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 97; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:23957756-23959518 FORWARD LENGTH=299	LOC_Os05g02010.1	protein|expressed protein	IMGA|Medtr5g011220.1	PGR5-like protein 1A chr5 2946108-2943524 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_02527	C	C1A	Potri.001G241400	Potri.001G241400(CA)	sp|Q8GYC7|PGL1B_ARATH	PGR5-like protein 1B, chloroplastic OS=Arabidopsis thaliana GN=PGRL1B PE=1 SV=1	AT5G59400.1	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: PGR5-like B (TAIR:AT4G11960.1); Has 97 Blast hits to 97 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 97; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:23957756-23959518 FORWARD LENGTH=299	LOC_Os05g02010.1	protein|expressed protein	IMGA|Medtr5g011220.1	PGR5-like protein 1A chr5 2946108-2943524 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_02528	A	A1S	Potri.001G241500	Potri.001G241500(AS)	POPTR_0001s24830	sp|Q9CQT9|CT024_MOUSE	Uncharacterized protein C20orf24 homolog OS=Mus musculus PE=2 SV=1	AT5G59410.1	| Symbols: | Rab5-interacting family protein | chr5:23959761-23960730 REVERSE LENGTH=130	LOC_Os05g01994.1	protein|rab5-interacting protein like, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_02529	A	A1S	Potri.001G241600	Potri.001G241600(AS)	POPTR_0001s24840	sp|Q6R0E3|TRP5_ARATH	Telomere repeat-binding protein 5 OS=Arabidopsis thaliana GN=TRP5 PE=1 SV=2	AT1G07540.1	| Symbols: TRFL2 | TRF-like 2 | chr1:2318433-2321048 REVERSE LENGTH=630	LOC_Os03g16700.4	protein|initiator-binding protein, putative, expressed	IMGA|Medtr5g080010.1	Telomeric DNA-binding protein chr5 33232184-33236152 E EGN_Mt100125 20111014	NA	GO:0003677|DNA binding	GO:0005634|nucleus
pt2_02530	A	A1S	Potri.001G241700	Potri.001G241700(AS)	POPTR_0001s24850	sp|Q9XE58|SCL14_ARATH	Scarecrow-like protein 14 OS=Arabidopsis thaliana GN=SCL14 PE=2 SV=2	AT1G07530.1	| Symbols: SCL14, ATGRAS2, GRAS2 | SCARECROW-like 14 | chr1:2313828-2316137 REVERSE LENGTH=769	LOC_Os03g48450.4	protein|SCARECROW, putative, expressed	IMGA|Medtr5g097480.1	Chitin-inducible gibberellin-responsive protein chr5 41660791-41664149 E EGN_Mt100125 20111014	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0006355|regulation of transcription, DNA-dependent GO:0006486|protein glycosylation GO:0009410|response to xenobiotic stimulus GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus GO:0005829|cytosol
pt2_02531	A	A1S	Potri.001G241800	Potri.001G241800(AS)	POPTR_0001s24860	sp|Q9XE58|SCL14_ARATH	Scarecrow-like protein 14 OS=Arabidopsis thaliana GN=SCL14 PE=2 SV=2	AT1G07530.1	| Symbols: SCL14, ATGRAS2, GRAS2 | SCARECROW-like 14 | chr1:2313828-2316137 REVERSE LENGTH=769	LOC_Os03g48450.4	protein|SCARECROW, putative, expressed	IMGA|Medtr5g097480.1	Chitin-inducible gibberellin-responsive protein chr5 41660791-41664149 E EGN_Mt100125 20111014	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0006355|regulation of transcription, DNA-dependent GO:0006486|protein glycosylation GO:0009410|response to xenobiotic stimulus GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus GO:0005829|cytosol
pt2_02532	A	A1S	Potri.001G241900	Potri.001G241900(AS)	POPTR_0001s24870	sp|Q9XE58|SCL14_ARATH	Scarecrow-like protein 14 OS=Arabidopsis thaliana GN=SCL14 PE=2 SV=2	AT1G07530.1	| Symbols: SCL14, ATGRAS2, GRAS2 | SCARECROW-like 14 | chr1:2313828-2316137 REVERSE LENGTH=769	LOC_Os03g48450.4	protein|SCARECROW, putative, expressed	IMGA|Medtr5g097480.1	Chitin-inducible gibberellin-responsive protein chr5 41660791-41664149 E EGN_Mt100125 20111014	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0006355|regulation of transcription, DNA-dependent GO:0006486|protein glycosylation GO:0009410|response to xenobiotic stimulus GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus GO:0005829|cytosol
pt2_02533	A	A1S	Potri.001G242000	Potri.001G242000(AS)	POPTR_0001s24880	sp|P0C883|SCL33_ARATH	Scarecrow-like protein 33 OS=Arabidopsis thaliana GN=SCL33 PE=3 SV=1	AT2G29060.1	| Symbols: | GRAS family transcription factor | chr2:12481991-12484075 FORWARD LENGTH=694	LOC_Os03g48450.4	protein|SCARECROW, putative, expressed	IMGA|Medtr5g097480.1	Chitin-inducible gibberellin-responsive protein chr5 41660791-41664149 E EGN_Mt100125 20111014	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0006355|regulation of transcription, DNA-dependent GO:0006486|protein glycosylation GO:0009410|response to xenobiotic stimulus GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus GO:0005829|cytosol
pt2_02534	A	A1S	Potri.001G242100	Potri.001G242100(AS)	POPTR_0001s24890	sp|P0C883|SCL33_ARATH	Scarecrow-like protein 33 OS=Arabidopsis thaliana GN=SCL33 PE=3 SV=1	AT2G29060.1	| Symbols: | GRAS family transcription factor | chr2:12481991-12484075 FORWARD LENGTH=694	LOC_Os03g48450.4	protein|SCARECROW, putative, expressed	IMGA|Medtr5g097480.1	Chitin-inducible gibberellin-responsive protein chr5 41660791-41664149 E EGN_Mt100125 20111014	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0006355|regulation of transcription, DNA-dependent GO:0006486|protein glycosylation GO:0009410|response to xenobiotic stimulus GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus GO:0005829|cytosol
pt2_02535	A	A1S	Potri.001G242200	Potri.001G242200(AS)	POPTR_0001s24900	sp|P70362|UFD1_MOUSE	Ubiquitin fusion degradation protein 1 homolog OS=Mus musculus GN=Ufd1l PE=1 SV=2	AT2G29070.2	| Symbols: | Ubiquitin fusion degradation UFD1 family protein | chr2:12487797-12489335 FORWARD LENGTH=312	LOC_Os02g08480.1	protein|ubiquitin fusion degradation protein, putative, expressed	IMGA|Medtr5g086350.1	Ubiquitin fusion degradation protein-like protein chr5 36310460-36315526 E EGN_Mt100125 20111014	GO:0006511|ubiquitin-dependent protein catabolic process	NA	GO:0005575|cellular_component GO:0005634|nucleus GO:0009507|chloroplast
pt2_02536	A	A1S	Potri.001G242200	Potri.001G242200(AS)	POPTR_0001s24900	sp|P70362|UFD1_MOUSE	Ubiquitin fusion degradation protein 1 homolog OS=Mus musculus GN=Ufd1l PE=1 SV=2	AT2G29070.2	| Symbols: | Ubiquitin fusion degradation UFD1 family protein | chr2:12487797-12489335 FORWARD LENGTH=312	LOC_Os02g08480.1	protein|ubiquitin fusion degradation protein, putative, expressed	IMGA|Medtr5g086350.1	Ubiquitin fusion degradation protein-like protein chr5 36310460-36315526 E EGN_Mt100125 20111014	GO:0006511|ubiquitin-dependent protein catabolic process	NA	GO:0005575|cellular_component GO:0005634|nucleus GO:0009507|chloroplast
pt2_02537	A	A2S	Potri.001G242200	Potri.001G242200(AS) Potri.001G242300(AA)	POPTR_0001s24900	sp|P70362|UFD1_MOUSE	Ubiquitin fusion degradation protein 1 homolog OS=Mus musculus GN=Ufd1l PE=1 SV=2	AT2G29070.2	| Symbols: | Ubiquitin fusion degradation UFD1 family protein | chr2:12487797-12489335 FORWARD LENGTH=312	LOC_Os02g08480.1	protein|ubiquitin fusion degradation protein, putative, expressed	IMGA|Medtr5g086350.1	Ubiquitin fusion degradation protein-like protein chr5 36310460-36315526 E EGN_Mt100125 20111014	GO:0006511|ubiquitin-dependent protein catabolic process	NA	GO:0005575|cellular_component GO:0005634|nucleus GO:0009507|chloroplast
pt2_02538	A	A2S	Potri.001G242300	Potri.001G242300(AS) Potri.001G242200(AA)	POPTR_0001s24910	sp|Q09893|YAI5_SCHPO	Uncharacterized protein C24B11.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC24B11.05 PE=2 SV=1	AT5G59480.1	| Symbols: | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr5:23979619-23981156 REVERSE LENGTH=282	LOC_Os01g74152.1	protein|haloacid dehalogenase-like hydrolase family protein, putative, expressed	NA	NA	GO:0015824|proline transport	GO:0016787|hydrolase activity	GO:0005634|nucleus
pt2_02539	A	A2S	Potri.001G242400	Potri.001G242400(AS) Potri.009G033700(DS)	POPTR_0001s24920	NA	NA	AT5G59500.1	| Symbols: | protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferases | chr5:23986024-23987214 FORWARD LENGTH=396	NA	NA	NA	NA	GO:0006481|C-terminal protein methylation	GO:0004671|protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity	GO:0005576|extracellular region GO:0016021|integral to membrane
pt2_02540	C	C1S	Potri.001G242500	Potri.001G242500(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02541	A	A1S	Potri.001G242600	Potri.001G242600(AS)	POPTR_0001s24940	sp|O81077|ABAH2_ARATH	Abscisic acid 8'-hydroxylase 2 OS=Arabidopsis thaliana GN=CYP707A2 PE=2 SV=1	AT2G29090.2	| Symbols: CYP707A2 | cytochrome P450, family 707, subfamily A, polypeptide 2 | chr2:12495038-12499080 REVERSE LENGTH=482	LOC_Os02g47470.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g025610.1	Abscisic acid 8'-hydroxylase chr5 10165401-10168264 F EGN_Mt100125 20111014	GO:0009639|response to red or far red light GO:0009687|abscisic acid metabolic process GO:0010114|response to red light GO:0048838|release of seed from dormancy GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0010295|(+)-abscisic acid 8'-hydroxylase activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0009507|chloroplast
pt2_02542	A	A1S	Potri.001G242600	Potri.001G242600(AS)	POPTR_0001s24940	sp|O81077|ABAH2_ARATH	Abscisic acid 8'-hydroxylase 2 OS=Arabidopsis thaliana GN=CYP707A2 PE=2 SV=1	AT2G29090.2	| Symbols: CYP707A2 | cytochrome P450, family 707, subfamily A, polypeptide 2 | chr2:12495038-12499080 REVERSE LENGTH=482	LOC_Os02g47470.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g025610.1	Abscisic acid 8'-hydroxylase chr5 10165401-10168264 F EGN_Mt100125 20111014	GO:0009639|response to red or far red light GO:0009687|abscisic acid metabolic process GO:0010114|response to red light GO:0048838|release of seed from dormancy GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0010295|(+)-abscisic acid 8'-hydroxylase activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0009507|chloroplast
pt2_02543	A	A1S	Potri.001G242600	Potri.001G242600(AS)	POPTR_0001s24940	sp|O81077|ABAH2_ARATH	Abscisic acid 8'-hydroxylase 2 OS=Arabidopsis thaliana GN=CYP707A2 PE=2 SV=1	AT2G29090.2	| Symbols: CYP707A2 | cytochrome P450, family 707, subfamily A, polypeptide 2 | chr2:12495038-12499080 REVERSE LENGTH=482	LOC_Os02g47470.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g025610.1	Abscisic acid 8'-hydroxylase chr5 10165401-10168264 F EGN_Mt100125 20111014	GO:0009639|response to red or far red light GO:0009687|abscisic acid metabolic process GO:0010114|response to red light GO:0048838|release of seed from dormancy GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0010295|(+)-abscisic acid 8'-hydroxylase activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0009507|chloroplast
pt2_02544	A	A2S	Potri.001G242800	Potri.001G242800(AS) Potri.009G034300(DS)	POPTR_0001s24950	NA	NA	AT2G29125.1	| Symbols: RTFL2, DVL13 | ROTUNDIFOLIA like 2 | chr2:12523472-12523819 FORWARD LENGTH=115	NA	NA	IMGA|contig_113684_1.1	Unknown protein contig_113684 437-156 H PREDN 20111014	GO:0015824|proline transport GO:0048367|shoot development	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02545	A	A1A	Potri.001G242900	Potri.001G242900(AA)	POPTR_0001s24960	sp|Q8WUQ7|CS029_HUMAN	Uncharacterized protein C19orf29 OS=Homo sapiens GN=C19orf29 PE=1 SV=3	AT1G03910.1	| Symbols: | EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cactin protein, cactus-binding domain, C-terminal (InterPro:IPR019134), Cactin, central region (InterPro:IPR018816); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G36815.2); Has 11711 Blast hits to 7382 proteins in 452 species: Archae - 31; Bacteria - 352; Metazoa - 6006; Fungi - 1138; Plants - 599; Viruses - 33; Other Eukaryotes - 3552 (source: NCBI BLink). | chr1:996432-1000231 FORWARD LENGTH=672	LOC_Os03g58590.1	protein|expressed protein	NA	NA	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0008150|biological_process GO:0051604|protein maturation	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02546	A	A1S	Potri.001G243000	Potri.001G243000(AS)	POPTR_0001s24970	sp|Q9LK21|CXE11_ARATH	Probable carboxylesterase 11 OS=Arabidopsis thaliana GN=CXE11 PE=2 SV=1	AT3G27320.2	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr3:10090307-10092391 FORWARD LENGTH=428	LOC_Os12g15400.1	protein|CXE carboxylesterase, putative, expressed	NA	NA	GO:0008152|metabolic process	GO:0016787|hydrolase activity	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_02547	A	A1S	Potri.001G243100	Potri.001G243100(AS)	POPTR_0001s24980	NA	NA	AT1G76440.3	| Symbols: | HSP20-like chaperones superfamily protein | chr1:28682371-28682999 REVERSE LENGTH=143	NA	NA	IMGA|Medtr1g082670.1	Heat shock protein-like protein chr1 21319213-21317430 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_02548	G	G1	NA	NA	POPTR_0001s24990	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02549	B	B1S	Potri.005G129200	Potri.005G129200(BS)	POPTR_0001s25000	NA	NA	AT5G05800.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 881 Blast hits to 512 proteins in 30 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 38; Plants - 833; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). | chr5:1743234-1744751 REVERSE LENGTH=449	LOC_Os12g10550.1	protein|transposon protein, putative, CACTA, En/Spm sub-class, expressed	IMGA|Medtr5g054570.1	PIF-like protein chr5 21936286-21937344 H EGN_Mt100125 20111014	GO:0008150|biological_process GO:0048573|photoperiodism, flowering	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_02550	G	G1	NA	NA	POPTR_0001s25010	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02551	A	A1S	Potri.001G243400	Potri.001G243400(AS)	POPTR_0001s25020	sp|Q9ZW06|PUM2_ARATH	Pumilio homolog 2 OS=Arabidopsis thaliana GN=APUM2 PE=1 SV=1	AT2G29190.2	| Symbols: PUM2 | pumilio 2 | chr2:12544260-12548071 REVERSE LENGTH=972	LOC_Os01g62650.1	protein|pumilio-family RNA binding protein, putative, expressed	IMGA|Medtr5g080390.1	Pumilio-like protein chr5 33399353-33406744 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003723|RNA binding GO:0003729|mRNA binding GO:0003730|mRNA 3'-UTR binding	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_02552	A	A1S	Potri.001G243500	Potri.001G243500(AS)	POPTR_0001s25030	NA	NA	AT2G29180.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 34 Blast hits to 33 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | chr2:12543081-12543702 FORWARD LENGTH=169	NA	NA	NA	NA	GO:0008150|biological_process GO:0009965|leaf morphogenesis GO:0030154|cell differentiation GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane
pt2_02553	A	A1S	Potri.001G243600	Potri.001G243600(AS)	POPTR_0001s25040	sp|Q9ZWJ9|ARR2_ARATH	Two-component response regulator ARR2 OS=Arabidopsis thaliana GN=ARR2 PE=1 SV=1	AT3G46640.2	| Symbols: PCL1 | Homeodomain-like superfamily protein | chr3:17183248-17184219 FORWARD LENGTH=323	LOC_Os01g74020.1	protein|MYB family transcription factor, putative, expressed	IMGA|AC232874_1021.1	Two-component response regulator ARR1 AC232874.5 84940-86635 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0007623|circadian rhythm	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_02554	R	R	NA	NA	POPTR_0001s25050	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02555	A	A1S	Potri.001G243800	Potri.001G243800(AS)	POPTR_0001s25060	sp|Q9FGR2|PP436_ARATH	Pentatricopeptide repeat-containing protein At5g59600 OS=Arabidopsis thaliana GN=PCMP-E1 PE=2 SV=1	AT5G59600.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:24011315-24012919 REVERSE LENGTH=534	LOC_Os03g16450.1	protein|pentatricopeptide, putative, expressed	IMGA|Medtr1g007600.1	Pentatricopeptide repeat-containing protein chr1 1022538-1020055 H EGN_Mt100125 20111014	GO:0007062|sister chromatid cohesion GO:0007131|reciprocal meiotic recombination GO:0008150|biological_process GO:0033044|regulation of chromosome organization GO:0042138|meiotic DNA double-strand break formation GO:0045132|meiotic chromosome segregation	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_02556	C	C1S	Potri.001G243900	Potri.001G243900(CS)	NA	NA	AT3G46750.1	| Symbols: | unknown protein; Has 2631 Blast hits to 1984 proteins in 271 species: Archae - 6; Bacteria - 163; Metazoa - 1232; Fungi - 253; Plants - 141; Viruses - 8; Other Eukaryotes - 828 (source: NCBI BLink). | chr3:17219944-17221461 FORWARD LENGTH=388	NA	NA	NA	NA	GO:0008150|biological_process GO:0009827|plant-type cell wall modification GO:0009860|pollen tube growth	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_02557	A	A1S	Potri.001G244000	Potri.001G244000(AS)	POPTR_0001s25090	sp|Q9M345|LRK42_ARATH	L-type lectin-domain containing receptor kinase IV.2 OS=Arabidopsis thaliana GN=LECRK42 PE=2 SV=1	AT3G53810.1	| Symbols: | Concanavalin A-like lectin protein kinase family protein | chr3:19933153-19935186 REVERSE LENGTH=677	LOC_Os04g44910.1	protein|receptor like protein kinase, putative, expressed	IMGA|Medtr5g035910.1	Lectin-domain containing receptor kinase A4.2 chr5 15202656-15200596 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006612|protein targeting to membrane GO:0006944|cellular membrane fusion GO:0009555|pollen development GO:0010363|regulation of plant-type hypersensitive response GO:0043069|negative regulation of programmed cell death	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_02558	A	A1S	Potri.001G244100	Potri.001G244100(AS)	POPTR_0001s25100	sp|Q0WWW9|XYLL3_ARATH	D-xylose-proton symporter-like 3, chloroplastic OS=Arabidopsis thaliana GN=At5g59250 PE=1 SV=2	AT5G59250.1	| Symbols: | Major facilitator superfamily protein | chr5:23903958-23906853 FORWARD LENGTH=558	LOC_Os10g42830.1	protein|transporter family protein, putative, expressed	IMGA|Medtr5g075300.1	hypothetical protein chr5 30990801-30988749 H EGN_Mt100125 20111014	GO:0006810|transport GO:0019684|photosynthesis, light reaction GO:0055085|transmembrane transport	GO:0005215|transporter activity GO:0005351|sugar:hydrogen symporter activity GO:0015144|carbohydrate transmembrane transporter activity GO:0022857|transmembrane transporter activity GO:0022891|substrate-specific transmembrane transporter activity	GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009941|chloroplast envelope GO:0016020|membrane GO:0016021|integral to membrane
pt2_02559	C	C1S	Potri.001G244200	Potri.001G244200(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02560	R	R	NA	NA	POPTR_0001s25120	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02561	A	A1S	Potri.001G244400	Potri.001G244400(AS)	POPTR_0001s25120	NA	NA	AT1G07470.1	| Symbols: | Transcription factor IIA, alpha/beta subunit | chr1:2291723-2294350 FORWARD LENGTH=375	LOC_Os05g22670.1	protein|transcription factor IIA large subunit, putative, expressed	NA	NA	GO:0006351|transcription, DNA-dependent GO:0006367|transcription initiation from RNA polymerase II promoter	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus GO:0005672|transcription factor TFIIA complex
pt2_02562	A	A2S	Potri.001G244300	Potri.001G244300(AS) Potri.009G036700(DS)	POPTR_0001s25120	NA	NA	AT1G07470.1	| Symbols: | Transcription factor IIA, alpha/beta subunit | chr1:2291723-2294350 FORWARD LENGTH=375	LOC_Os05g22670.1	protein|transcription factor IIA large subunit, putative, expressed	NA	NA	GO:0006351|transcription, DNA-dependent GO:0006367|transcription initiation from RNA polymerase II promoter	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus GO:0005672|transcription factor TFIIA complex
pt2_02563	C	C2S	Potri.001G244300	Potri.001G244300(CS) Potri.001G244200(CA)	NA	NA	AT1G07470.1	| Symbols: | Transcription factor IIA, alpha/beta subunit | chr1:2291723-2294350 FORWARD LENGTH=375	LOC_Os05g22670.1	protein|transcription factor IIA large subunit, putative, expressed	NA	NA	GO:0006351|transcription, DNA-dependent GO:0006367|transcription initiation from RNA polymerase II promoter	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus GO:0005672|transcription factor TFIIA complex
pt2_02564	A	A1S	Potri.001G244600	Potri.001G244600(AS)	POPTR_0001s25140	sp|Q5ZMJ9|SRRM1_CHICK	Serine/arginine repetitive matrix protein 1 OS=Gallus gallus GN=SRRM1 PE=2 SV=1	AT2G29210.1	| Symbols: | splicing factor PWI domain-containing protein | chr2:12558156-12562168 FORWARD LENGTH=878	LOC_Os03g16369.1	protein|retrotransposon protein, putative, unclassified, expressed	NA	NA	GO:0006397|mRNA processing GO:0008380|RNA splicing	GO:0005515|protein binding	GO:0005634|nucleus
pt2_02565	A	A3S	Potri.001G244700	Potri.001G244700(AS) Potri.001G244500(AA) Potri.001G244600(AA)	POPTR_0001s25150	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02566	A	A1S	Potri.001G244800	Potri.001G244800(AS)	POPTR_0001s25160	sp|Q8SKU2|TIC62_PEA	Protein TIC 62, chloroplastic OS=Pisum sativum GN=TIC62 PE=1 SV=2	AT3G46780.1	| Symbols: PTAC16 | plastid transcriptionally active 16 | chr3:17228766-17231021 FORWARD LENGTH=510	LOC_Os05g22614.1	protein|PTAC16, putative, expressed	NA	NA	GO:0006098|pentose-phosphate shunt GO:0006364|rRNA processing GO:0007623|circadian rhythm GO:0009637|response to blue light GO:0009902|chloroplast relocation GO:0010027|thylakoid membrane organization GO:0010103|stomatal complex morphogenesis GO:0010114|response to red light GO:0010218|response to far red light GO:0015979|photosynthesis GO:0015995|chlorophyll biosynthetic process GO:0016117|carotenoid biosynthetic process GO:0019684|photosynthesis, light reaction GO:0019761|glucosinolate biosynthetic process GO:0034660|ncRNA metabolic process	GO:0000166|nucleotide binding	GO:0009295|nucleoid GO:0009507|chloroplast GO:0009508|plastid chromosome GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009941|chloroplast envelope GO:0016020|membrane
pt2_02567	A	A1S	Potri.001G244900	Potri.001G244900(AS)	POPTR_0001s25170	sp|P50165|TRNH_DATST	Tropinone reductase homolog OS=Datura stramonium PE=2 SV=1	AT2G29260.1	| Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr2:12582523-12583954 FORWARD LENGTH=322	LOC_Os03g16220.1	protein|oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed	NA	NA	GO:0008152|metabolic process	GO:0000166|nucleotide binding GO:0016491|oxidoreductase activity	NA
pt2_02568	A	A1S	Potri.001G245000	Potri.001G245000(AS)	POPTR_0001s25180	sp|Q9ASX2|TRNH1_ARATH	Tropinone reductase homolog At1g07440 OS=Arabidopsis thaliana GN=At1g07440 PE=1 SV=1	AT2G29150.1	| Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr2:12535715-12536964 REVERSE LENGTH=268	LOC_Os03g16220.1	protein|oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed	NA	NA	GO:0000023|maltose metabolic process GO:0006098|pentose-phosphate shunt GO:0008152|metabolic process GO:0019252|starch biosynthetic process GO:0043085|positive regulation of catalytic activity GO:0046686|response to cadmium ion GO:0080167|response to karrikin	GO:0000166|nucleotide binding GO:0016491|oxidoreductase activity	GO:0005575|cellular_component
pt2_02569	A	A1S	Potri.001G245100	Potri.001G245100(AS)	POPTR_0001s25190	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02570	A	A1S	Potri.001G245200	Potri.001G245200(AS)	POPTR_0001s25200	sp|Q9ZW21|P2C24_ARATH	Probable protein phosphatase 2C 24 OS=Arabidopsis thaliana GN=At2g29380 PE=2 SV=1	AT2G29380.1	| Symbols: HAI3 | highly ABA-induced PP2C gene 3 | chr2:12608855-12610124 FORWARD LENGTH=362	LOC_Os01g62760.1	protein|protein phosphatase 2C, putative, expressed	IMGA|Medtr5g080680.1	Protein phosphatase 2C chr5 33524252-33526470 F EGN_Mt100125 20111014	GO:0006470|protein dephosphorylation GO:0009738|abscisic acid mediated signaling pathway	GO:0003824|catalytic activity GO:0004722|protein serine/threonine phosphatase activity	GO:0005886|plasma membrane GO:0008287|protein serine/threonine phosphatase complex
pt2_02571	A	A1S	Potri.001G245200	Potri.001G245200(AS)	POPTR_0001s25200	sp|Q9ZW21|P2C24_ARATH	Probable protein phosphatase 2C 24 OS=Arabidopsis thaliana GN=At2g29380 PE=2 SV=1	AT2G29380.1	| Symbols: HAI3 | highly ABA-induced PP2C gene 3 | chr2:12608855-12610124 FORWARD LENGTH=362	LOC_Os01g62760.1	protein|protein phosphatase 2C, putative, expressed	IMGA|Medtr5g080680.1	Protein phosphatase 2C chr5 33524252-33526470 F EGN_Mt100125 20111014	GO:0006470|protein dephosphorylation GO:0009738|abscisic acid mediated signaling pathway	GO:0003824|catalytic activity GO:0004722|protein serine/threonine phosphatase activity	GO:0005886|plasma membrane GO:0008287|protein serine/threonine phosphatase complex
pt2_02572	A	A1S	Potri.001G245300	Potri.001G245300(AS)	POPTR_0001s25210	sp|Q8VWZ8|SMO22_ARATH	Methylsterol monooxygenase 2-2 OS=Arabidopsis thaliana GN=SMO2-2 PE=2 SV=1	AT1G07420.1	| Symbols: ATSMO2, SMO2-1 | sterol 4-alpha-methyl-oxidase 2-1 | chr1:2277910-2280033 FORWARD LENGTH=266	LOC_Os07g01150.3	protein|fatty acid hydroxylase, putative, expressed	IMGA|Medtr5g035190.1	Sterol 4-alpha-methyl-oxidase chr5 14887526-14890800 F EGN_Mt100125 20111014	GO:0006333|chromatin assembly or disassembly GO:0006633|fatty acid biosynthetic process GO:0016126|sterol biosynthetic process GO:0046520|sphingoid biosynthetic process GO:0055114|oxidation-reduction process	GO:0000254|C-4 methylsterol oxidase activity GO:0005506|iron ion binding GO:0016491|oxidoreductase activity GO:0080065|4-alpha-methyl-delta7-sterol-4alpha-methyl oxidase activity	GO:0009941|chloroplast envelope
pt2_02573	A	A1S	Potri.001G245400	Potri.001G245400(AS)	POPTR_0001s25220	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02574	A	A1S	Potri.001G245500	Potri.001G245500(AS)	POPTR_0001s25230	NA	NA	AT5G59210.1	| Symbols: | myosin heavy chain-related | chr5:23890802-23893619 REVERSE LENGTH=434	LOC_Os03g16120.1	protein|myosin heavy chain-related, putative, expressed	NA	NA	GO:0008150|biological_process GO:0030244|cellulose biosynthetic process GO:0048193|Golgi vesicle transport	NA	NA
pt2_02575	A	A1S	Potri.001G245600	Potri.001G245600(AS)	POPTR_0001s25240	sp|Q9STF3|PP265_ARATH	Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1	AT3G46790.1	| Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:17231975-17233948 REVERSE LENGTH=657	LOC_Os01g62910.1	protein|CRR2, putative, expressed	IMGA|Medtr5g008600.1	Pentatricopeptide repeat-containing protein chr5 1604164-1608184 H EGN_Mt100125 20111014	GO:0000398|mRNA splicing, via spliceosome GO:0006355|regulation of transcription, DNA-dependent GO:0030422|production of siRNA involved in RNA interference GO:0031425|chloroplast RNA processing GO:0031426|polycistronic mRNA processing GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0043687|post-translational protein modification GO:0045893|positive regulation of transcription, DNA-dependent	NA	GO:0009507|chloroplast
pt2_02576	A	A1S	Potri.001G245700	Potri.001G245700(AS)	POPTR_0001s25260	sp|O04856|PP11_TOBAC	Serine/threonine-protein phosphatase PP1 isozyme 1 OS=Nicotiana tabacum GN=NPP1 PE=2 SV=1	AT2G29400.1	| Symbols: TOPP1, PP1-AT | type one protein phosphatase 1 | chr2:12613789-12615283 REVERSE LENGTH=318	LOC_Os03g16110.3	protein|Ser/Thr protein phosphatase family protein, putative, expressed	IMGA|Medtr5g081230.1	Serine/threonine protein phosphatase chr5 33774182-33779036 F EGN_Mt100125 20111014	GO:0006470|protein dephosphorylation	GO:0004722|protein serine/threonine phosphatase activity GO:0016787|hydrolase activity	GO:0000164|protein phosphatase type 1 complex GO:0005737|cytoplasm
pt2_02577	A	A1S	Potri.001G245800	Potri.001G245800(AS)	POPTR_0001s25270	sp|Q6DBM8|MTPB_ARATH	Metal tolerance protein B OS=Arabidopsis thaliana GN=MTPB PE=2 SV=1	AT2G29410.1	| Symbols: MTPB1, ATMTPB1 | metal tolerance protein B1 | chr2:12616810-12617937 FORWARD LENGTH=375	LOC_Os05g03780.1	protein|cation efflux family protein, putative, expressed	IMGA|contig_85015_1.1	Zinc transporter contig_85015 1536-98 E PREDN 20111014	GO:0006812|cation transport GO:0006829|zinc ion transport GO:0009723|response to ethylene stimulus GO:0009827|plant-type cell wall modification GO:0009860|pollen tube growth GO:0055085|transmembrane transport	GO:0005385|zinc ion transmembrane transporter activity GO:0008324|cation transmembrane transporter activity GO:0015103|inorganic anion transmembrane transporter activity GO:0015562|efflux transmembrane transporter activity	GO:0005737|cytoplasm GO:0016021|integral to membrane
pt2_02578	A	A1S	Potri.001G245900	Potri.001G245900(AS)	POPTR_0001s25280	sp|Q94AB5|U7E12_ARATH	UDP-glycosyltransferase 76E12 OS=Arabidopsis thaliana GN=UGT76E12 PE=2 SV=1	AT3G46660.1	| Symbols: UGT76E12 | UDP-glucosyl transferase 76E12 | chr3:17189406-17190862 REVERSE LENGTH=458	LOC_Os07g13770.1	protein|UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed	IMGA|Medtr5g058320.1	Cytokinin-O-glucosyltransferase chr5 23438112-23436435 H EGN_Mt100125 20111014	GO:0008152|metabolic process	GO:0008194|UDP-glycosyltransferase activity GO:0016758|transferase activity, transferring hexosyl groups GO:0080043|quercetin 3-O-glucosyltransferase activity GO:0080044|quercetin 7-O-glucosyltransferase activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02579	A	A1S	Potri.001G246000	Potri.001G246000(AS)	POPTR_0001s25290	sp|Q39065|COPT1_ARATH	Copper transporter 1 OS=Arabidopsis thaliana GN=COPT1 PE=2 SV=2	AT5G59030.1	| Symbols: COPT1 | copper transporter 1 | chr5:23833945-23834457 REVERSE LENGTH=170	LOC_Os01g56420.1	protein|ctr copper transporter family protein, putative, expressed	NA	NA	GO:0006825|copper ion transport GO:0035434|copper ion transmembrane transport GO:0048235|pollen sperm cell differentiation GO:0048364|root development	GO:0005375|copper ion transmembrane transporter activity	GO:0016020|membrane GO:0016021|integral to membrane
pt2_02580	A	A1S	Potri.001G246100	Potri.001G246100(AS)	POPTR_0001s25300	sp|P46070|TF3B_KLULA	Transcription factor IIIB 70 kDa subunit OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=TDS4 PE=3 SV=2	AT3G09360.1	| Symbols: | Cyclin/Brf1-like TBP-binding protein | chr3:2873796-2878432 FORWARD LENGTH=604	LOC_Os05g23940.1	protein|transcription initiation factor IIB, putative, expressed	NA	NA	GO:0006352|DNA-dependent transcription, initiation GO:0006355|regulation of transcription, DNA-dependent GO:0006413|translational initiation GO:0007062|sister chromatid cohesion GO:0010440|stomatal lineage progression GO:0031048|chromatin silencing by small RNA GO:0045132|meiotic chromosome segregation GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003743|translation initiation factor activity GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_02581	A	A1S	Potri.001G246100	Potri.001G246100(AS)	POPTR_0001s25330	sp|P46070|TF3B_KLULA	Transcription factor IIIB 70 kDa subunit OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=TDS4 PE=3 SV=2	AT3G09360.1	| Symbols: | Cyclin/Brf1-like TBP-binding protein | chr3:2873796-2878432 FORWARD LENGTH=604	LOC_Os05g23940.1	protein|transcription initiation factor IIB, putative, expressed	NA	NA	GO:0006352|DNA-dependent transcription, initiation GO:0006355|regulation of transcription, DNA-dependent GO:0006413|translational initiation GO:0007062|sister chromatid cohesion GO:0010440|stomatal lineage progression GO:0031048|chromatin silencing by small RNA GO:0045132|meiotic chromosome segregation GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003743|translation initiation factor activity GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_02582	A	A1S	Potri.001G246200	Potri.001G246200(AS)	POPTR_0001s25340	NA	NA	AT5G59020.1	| Symbols: | Protein of unknown function (DUF3527) | chr5:23827160-23829603 REVERSE LENGTH=780	LOC_Os03g16070.2	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_02583	D	D1S	Potri.001G246300	Potri.001G246300(DS)	POPTR_0001s25350	NA	NA	AT2G29525.3	| Symbols: AtIPCS3 | Arabidopsis Inositol phosphorylceramide synthase 3 | chr2:12638533-12640661 FORWARD LENGTH=289	LOC_Os01g63060.1	protein|phosphatidic acid phosphatase-related, putative, expressed	NA	NA	GO:0030148|sphingolipid biosynthetic process	GO:0045140|inositol phosphoceramide synthase activity	GO:0005886|plasma membrane
pt2_02584	A	A1S	Potri.001G246400	Potri.001G246400(AS)	POPTR_0001s25360	sp|Q9FHD7|Y5126_ARATH	Probable serine/threonine-protein kinase At5g41260 OS=Arabidopsis thaliana GN=At5g41260 PE=1 SV=1	AT5G59010.1	| Symbols: | Protein kinase protein with tetratricopeptide repeat domain | chr5:23820578-23823099 REVERSE LENGTH=489	LOC_Os03g61010.1	protein|protein kinase family protein, putative, expressed	IMGA|Medtr5g098970.1	Receptor like protein kinase chr5 42299884-42292251 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006499|N-terminal protein myristoylation	GO:0004672|protein kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_02585	A	A1S	Potri.001G246500	Potri.001G246500(AS)	POPTR_0001s25370	sp|Q9ZW33|TIM10_ARATH	Mitochondrial import inner membrane translocase subunit Tim10 OS=Arabidopsis thaliana GN=TIM10 PE=2 SV=1	AT2G29530.2	| Symbols: TIM10 | Tim10/DDP family zinc finger protein | chr2:12641026-12642243 REVERSE LENGTH=83	LOC_Os03g61019.1	protein|mitochondrial import inner membrane translocase subunit Tim, putative, expressed	NA	NA	GO:0001510|RNA methylation GO:0006626|protein targeting to mitochondrion GO:0009853|photorespiration GO:0045039|protein import into mitochondrial inner membrane	GO:0015450|P-P-bond-hydrolysis-driven protein transmembrane transporter activity	GO:0005739|mitochondrion GO:0005743|mitochondrial inner membrane GO:0005758|mitochondrial intermembrane space GO:0009507|chloroplast GO:0042719|mitochondrial intermembrane space protein transporter complex
pt2_02586	A	A1S	Potri.001G246600	Potri.001G246600(AS)	POPTR_0001s25380	sp|Q5XK67|RPAC2_XENLA	DNA-directed RNA polymerases I and III subunit RPAC2 OS=Xenopus laevis GN=polr1d PE=3 SV=1	AT2G29540.2	| Symbols: ATRPC14, ATRPAC14, RPC14 | RNApolymerase 14 kDa subunit | chr2:12642727-12643828 FORWARD LENGTH=122	LOC_Os12g09280.1	protein|RNA polymerase subunit, putative, expressed	NA	NA	GO:0006351|transcription, DNA-dependent GO:0009304|tRNA transcription	GO:0003677|DNA binding GO:0003899|DNA-directed RNA polymerase activity GO:0046983|protein dimerization activity	GO:0005634|nucleus GO:0005666|DNA-directed RNA polymerase III complex
pt2_02587	A	A1S	Potri.001G246700	Potri.001G246700(AS)	POPTR_0001s25390	NA	NA	AT5G59000.1	| Symbols: | RING/FYVE/PHD zinc finger superfamily protein | chr5:23818768-23820018 FORWARD LENGTH=231	LOC_Os05g37900.1	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr5g081560.1	hypothetical protein chr5 33922757-33920573 E EGN_Mt100125 20111014	NA	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_02588	A	A1S	Potri.001G246800	Potri.001G246800(AS)	POPTR_0001s25400	NA	NA	AT5G52370.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G58990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:21260558-21261203 REVERSE LENGTH=142	LOC_Os02g27960.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_02589	A	A1S	Potri.001G246900	Potri.001G246900(AS)	POPTR_0001s25410	sp|P37392|TBB1_LUPAL	Tubulin beta-1 chain OS=Lupinus albus GN=TUBB1 PE=3 SV=1	AT5G62700.1	| Symbols: TUB3 | tubulin beta chain 3 | chr5:25184501-25186426 FORWARD LENGTH=450	LOC_Os03g01530.1	protein|tubulin/FtsZ domain containing protein, putative, expressed	IMGA|contig_53526_2.1	Tubulin beta chain contig_53526 5156-2874 H PREDN 20111014	GO:0006184|GTP catabolic process GO:0009409|response to cold GO:0009651|response to salt stress GO:0046686|response to cadmium ion GO:0051258|protein polymerization	GO:0003924|GTPase activity GO:0005198|structural molecule activity GO:0005525|GTP binding	GO:0005618|cell wall GO:0005730|nucleolus GO:0005737|cytoplasm GO:0005794|Golgi apparatus GO:0005874|microtubule GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0043234|protein complex GO:0045298|tubulin complex
pt2_02590	B	B1S	Potri.001G247000	Potri.001G247000(BS)	POPTR_0001s25420	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02591	A	A1S	Potri.001G247100	Potri.001G247100(AS)	POPTR_0001s25430	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02592	A	A2S	Potri.001G247300	Potri.001G247300(AS) Potri.001G247200(AS)	POPTR_0001s25440	NA	NA	AT5G43240.3	| Symbols: | Protein of unknown function (DUF674) | chr5:17353077-17354765 REVERSE LENGTH=512	LOC_Os04g50800.1	protein|expressed protein	IMGA|Medtr1g014060.1	hypothetical protein chr1 3628179-3626479 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02593	A	A1S	Potri.001G247300	Potri.001G247300(AS)	POPTR_0001s25450	NA	NA	AT5G43240.3	| Symbols: | Protein of unknown function (DUF674) | chr5:17353077-17354765 REVERSE LENGTH=512	LOC_Os04g50800.1	protein|expressed protein	IMGA|Medtr1g014060.1	hypothetical protein chr1 3628179-3626479 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02594	A	A2S	Potri.001G247400	Potri.001G247400(AS) Potri.009G040600(DS)	POPTR_0001s25460	sp|Q304B9|NCASE_ARATH	Neutral ceramidase OS=Arabidopsis thaliana GN=At2g38010 PE=2 SV=1	AT1G07380.1	| Symbols: | Neutral/alkaline non-lysosomal ceramidase | chr1:2264829-2268306 REVERSE LENGTH=779	LOC_Os01g43520.2	protein|neutral ceramidase precursor, putative, expressed	IMGA|Medtr5g096890.1	Neutral ceramidase chr5 41358661-41365273 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0017040|ceramidase activity	GO:0005576|extracellular region GO:0005774|vacuolar membrane
pt2_02595	A	A1S	Potri.001G247400	Potri.001G247400(AS)	POPTR_0001s25460	sp|Q304B9|NCASE_ARATH	Neutral ceramidase OS=Arabidopsis thaliana GN=At2g38010 PE=2 SV=1	AT1G07380.1	| Symbols: | Neutral/alkaline non-lysosomal ceramidase | chr1:2264829-2268306 REVERSE LENGTH=779	LOC_Os01g43520.2	protein|neutral ceramidase precursor, putative, expressed	IMGA|Medtr5g096890.1	Neutral ceramidase chr5 41358661-41365273 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0017040|ceramidase activity	GO:0005576|extracellular region GO:0005774|vacuolar membrane
pt2_02596	C	C1S	Potri.001G247400	Potri.001G247400(CS)	sp|Q304B9|NCASE_ARATH	Neutral ceramidase OS=Arabidopsis thaliana GN=At2g38010 PE=2 SV=1	AT1G07380.1	| Symbols: | Neutral/alkaline non-lysosomal ceramidase | chr1:2264829-2268306 REVERSE LENGTH=779	LOC_Os01g43520.2	protein|neutral ceramidase precursor, putative, expressed	IMGA|Medtr5g096890.1	Neutral ceramidase chr5 41358661-41365273 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0017040|ceramidase activity	GO:0005576|extracellular region GO:0005774|vacuolar membrane
pt2_02597	C	C1A	Potri.001G247500	Potri.001G247500(CA)	sp|Q9ZW34|ENO3_ARATH	Cytosolic enolase 3 OS=Arabidopsis thaliana GN=ENO3 PE=2 SV=1	AT2G29560.1	| Symbols: ENOC | cytosolic enolase | chr2:12646635-12649694 FORWARD LENGTH=475	LOC_Os09g20820.1	protein|enolase, putative, expressed	IMGA|Medtr5g096970.1	Enolase chr5 41399985-41408659 E EGN_Mt100125 20111014	GO:0006096|glycolysis	GO:0000287|magnesium ion binding GO:0004634|phosphopyruvate hydratase activity	GO:0000015|phosphopyruvate hydratase complex GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol
pt2_02598	C	C1S	Potri.001G247500	Potri.001G247500(CS)	sp|Q9ZW34|ENO3_ARATH	Cytosolic enolase 3 OS=Arabidopsis thaliana GN=ENO3 PE=2 SV=1	AT2G29560.1	| Symbols: ENOC | cytosolic enolase | chr2:12646635-12649694 FORWARD LENGTH=475	LOC_Os09g20820.1	protein|enolase, putative, expressed	IMGA|Medtr5g096970.1	Enolase chr5 41399985-41408659 E EGN_Mt100125 20111014	GO:0006096|glycolysis	GO:0000287|magnesium ion binding GO:0004634|phosphopyruvate hydratase activity	GO:0000015|phosphopyruvate hydratase complex GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol
pt2_02599	A	A1S	Potri.001G247600	Potri.001G247600(AS)	POPTR_0001s25480	sp|Q5XF09|PT311_ARATH	Probable sugar phosphate/phosphate translocator At3g11320 OS=Arabidopsis thaliana GN=At3g11320 PE=2 SV=1	AT3G11320.1	| Symbols: | Nucleotide-sugar transporter family protein | chr3:3547017-3548539 REVERSE LENGTH=308	LOC_Os03g17740.1	protein|transporter, putative, expressed	IMGA|Medtr5g081710.2	Maturase chr5 33996127-34007844 E EGN_Mt100125 20111014	GO:0006863|purine nucleobase transport GO:0016132|brassinosteroid biosynthetic process	GO:0008514|organic anion transmembrane transporter activity	GO:0005783|endoplasmic reticulum GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0016020|membrane
pt2_02600	A	A1S	Potri.001G247700	Potri.001G247700(AS)	POPTR_0001s25490	sp|O82797|PCNA_TOBAC	Proliferating cell nuclear antigen OS=Nicotiana tabacum GN=PCNA PE=2 SV=1	AT2G29570.1	| Symbols: PCNA2, ATPCNA2 | proliferating cell nuclear antigen 2 | chr2:12650139-12651598 REVERSE LENGTH=264	LOC_Os02g56130.1	protein|PCNA - Putative DNA replicative polymerase clamp, expressed	NA	NA	GO:0006260|DNA replication GO:0006261|DNA-dependent DNA replication GO:0006275|regulation of DNA replication GO:0006306|DNA methylation GO:0008283|cell proliferation GO:0042276|error-prone translesion synthesis GO:0051567|histone H3-K9 methylation	GO:0003677|DNA binding GO:0005515|protein binding GO:0030337|DNA polymerase processivity factor activity	GO:0005634|nucleus GO:0043626|PCNA complex
pt2_02601	A	A1S	Potri.001G247800	Potri.001G247800(AS)	POPTR_0001s25500	sp|Q9N2I9|UCP3_CANFA	Mitochondrial uncoupling protein 3 OS=Canis familiaris GN=UCP3 PE=2 SV=1	AT5G58970.1	| Symbols: ATUCP2, UCP2 | uncoupling protein 2 | chr5:23808642-23811018 REVERSE LENGTH=305	LOC_Os11g48040.1	protein|mitochondrial carrier protein, putative, expressed	IMGA|Medtr5g032420.1	Mitochondrial 2-oxoglutarate/malate carrier protein chr5 13491772-13493235 F EGN_Mt100125 20111014	GO:0006007|glucose catabolic process GO:0006839|mitochondrial transport GO:0009853|photorespiration	GO:0017077|oxidative phosphorylation uncoupler activity	GO:0005739|mitochondrion GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0031966|mitochondrial membrane
pt2_02602	B	B2S	Potri.001G248000	Potri.001G248000(BS) Potri.009G041000(DS)	POPTR_0001s25510	NA	NA	AT5G58960.3	| Symbols: GIL1 | Plant protein of unknown function (DUF641) | chr5:23806906-23808360 FORWARD LENGTH=484	LOC_Os03g61040.1	protein|GIL1, putative, expressed	IMGA|Medtr5g075180.1	hypothetical protein chr5 30936325-30937893 E EGN_Mt100125 20111014	GO:0007020|microtubule nucleation GO:0009639|response to red or far red light GO:0009959|negative gravitropism GO:0010075|regulation of meristem growth GO:0048653|anther development	GO:0003674|molecular_function	NA
pt2_02603	A	A1S	Potri.001G248100	Potri.001G248100(AS)	POPTR_0001s25520	sp|Q10422|YDC1_SCHPO	Uncharacterized RNA-binding protein C25G10.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC25G10.01 PE=1 SV=1	AT1G07350.1	| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr1:2257732-2260101 REVERSE LENGTH=382	LOC_Os03g15890.2	protein|RNA recognition motif containing protein, expressed	IMGA|Medtr5g023060.1	Scaffold attachment factor B1 chr5 8907854-8910694 F EGN_Mt100125 20111014	GO:0008380|RNA splicing GO:0009644|response to high light intensity GO:0043484|regulation of RNA splicing	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	NA
pt2_02604	A	A1S	Potri.001G248200	Potri.001G248200(AS)	POPTR_0001s25530	sp|Q66GI9|ANTR4_ARATH	Probable anion transporter 4, chloroplastic OS=Arabidopsis thaliana GN=ANTR4 PE=2 SV=1	AT3G46980.1	| Symbols: PHT4;3 | phosphate transporter 4;3 | chr3:17307294-17309899 REVERSE LENGTH=533	LOC_Os01g63290.1	protein|transporter, major facilitator family, putative, expressed	IMGA|Medtr5g069630.1	Major facilitator superfamily protein chr5 28542849-28535154 F EGN_Mt100125 20111014	GO:0015706|nitrate transport GO:0055085|transmembrane transport	GO:0005315|inorganic phosphate transmembrane transporter activity GO:0005351|sugar:hydrogen symporter activity GO:0008514|organic anion transmembrane transporter activity GO:0015144|carbohydrate transmembrane transporter activity	GO:0009507|chloroplast GO:0016020|membrane GO:0016021|integral to membrane
pt2_02605	C	C1S	Potri.001G248200	Potri.001G248200(CS)	sp|Q66GI9|ANTR4_ARATH	Probable anion transporter 4, chloroplastic OS=Arabidopsis thaliana GN=ANTR4 PE=2 SV=1	AT3G46980.1	| Symbols: PHT4;3 | phosphate transporter 4;3 | chr3:17307294-17309899 REVERSE LENGTH=533	LOC_Os01g63290.1	protein|transporter, major facilitator family, putative, expressed	IMGA|Medtr5g069630.1	Major facilitator superfamily protein chr5 28542849-28535154 F EGN_Mt100125 20111014	GO:0015706|nitrate transport GO:0055085|transmembrane transport	GO:0005315|inorganic phosphate transmembrane transporter activity GO:0005351|sugar:hydrogen symporter activity GO:0008514|organic anion transmembrane transporter activity GO:0015144|carbohydrate transmembrane transporter activity	GO:0009507|chloroplast GO:0016020|membrane GO:0016021|integral to membrane
pt2_02606	A	A2S	Potri.001G248300	Potri.001G248300(AS) Potri.009G042100(DS)	POPTR_0001s25540	NA	NA	AT2G29590.1	| Symbols: | Thioesterase superfamily protein | chr2:12654602-12655432 REVERSE LENGTH=158	NA	NA	IMGA|Medtr5g069640.1	Acyl-coenzyme A thioesterase chr5 28544629-28547810 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0016788|hydrolase activity, acting on ester bonds GO:0047617|acyl-CoA hydrolase activity	GO:0005737|cytoplasm GO:0005777|peroxisome
pt2_02607	A	A2S	Potri.001G248400	Potri.001G248400(AS) Potri.009G042200(DS)	POPTR_0001s25550	sp|Q9SS80|U503A_ARATH	UPF0503 protein At3g09070, chloroplastic OS=Arabidopsis thaliana GN=At3g09070 PE=1 SV=1	AT5G58930.1	| Symbols: | Protein of unknown function (DUF740) | chr5:23794529-23796094 REVERSE LENGTH=521	LOC_Os01g63310.1	protein|DUF740 domain containing protein, expressed	NA	NA	GO:0008150|biological_process GO:0009855|determination of bilateral symmetry GO:0009887|organ morphogenesis GO:0010051|xylem and phloem pattern formation GO:0048439|flower morphogenesis GO:0048519|negative regulation of biological process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_02608	A	A2S	Potri.001G248500	Potri.001G248500(AS) Potri.009G042300(BS)	POPTR_0001s25560	NA	NA	AT5G58920.1	| Symbols: | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:23793239-23794014 FORWARD LENGTH=162	LOC_Os01g26020.1	protein|expressed protein	IMGA|Medtr5g069660.1	hypothetical protein chr5 28559565-28558643 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_02609	A	A1S	Potri.001G248600	Potri.001G248600(AS)	POPTR_0001s25570	sp|Q9M390|PTR1_ARATH	Peptide transporter PTR1 OS=Arabidopsis thaliana GN=PTR1 PE=2 SV=1	AT3G54140.1	| Symbols: ATPTR1, PTR1 | peptide transporter 1 | chr3:20045885-20048154 REVERSE LENGTH=570	LOC_Os01g04950.2	protein|peptide transporter PTR2, putative, expressed	IMGA|Medtr5g055000.1	Peptide transporter PTR chr5 22113111-22119217 F EGN_Mt100125 20111014	GO:0006807|nitrogen compound metabolic process GO:0006857|oligopeptide transport GO:0015824|proline transport GO:0015996|chlorophyll catabolic process GO:0042938|dipeptide transport GO:0042939|tripeptide transport	GO:0005215|transporter activity GO:0042936|dipeptide transporter activity GO:0042937|tripeptide transporter activity	GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane
pt2_02610	A	A1S	Potri.001G248700	Potri.001G248700(AS)	POPTR_0001s25580	sp|O80434|LAC4_ARATH	Laccase-4 OS=Arabidopsis thaliana GN=IRX12 PE=2 SV=2	AT2G38080.1	| Symbols: IRX12, LAC4, ATLMCO4, LMCO4 | Laccase/Diphenol oxidase family protein | chr2:15934540-15937352 FORWARD LENGTH=558	LOC_Os11g48060.1	protein|laccase-22 precursor, putative, expressed	IMGA|Medtr5g069680.1	Laccase 1a chr5 28563726-28567609 H EGN_Mt100125 20111014	GO:0009809|lignin biosynthetic process GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process GO:0046274|lignin catabolic process GO:0055114|oxidation-reduction process	GO:0005507|copper ion binding GO:0016491|oxidoreductase activity GO:0052716|hydroquinone:oxygen oxidoreductase activity	GO:0005576|extracellular region GO:0048046|apoplast
pt2_02611	A	A1S	Potri.001G248800	Potri.001G248800(AS)	POPTR_0001s25590	sp|Q2V9B0|MY1R1_SOLTU	Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1	AT2G38090.1	| Symbols: | Duplicated homeodomain-like superfamily protein | chr2:15945278-15946775 FORWARD LENGTH=298	LOC_Os01g04930.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr5g069710.1	DnaJ homolog subfamily C member chr5 28575594-28577669 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_02612	A	A1S	Potri.001G248900	Potri.001G248900(AS)	POPTR_0001s25600	sp|Q9SBA7|STP8_ARATH	Sugar transport protein 8 OS=Arabidopsis thaliana GN=STP8 PE=2 SV=2	AT5G26250.1	| Symbols: | Major facilitator superfamily protein | chr5:9196758-9198681 FORWARD LENGTH=507	LOC_Os03g11900.1	protein|transporter family protein, putative, expressed	IMGA|Medtr5g006070.1	Hexose transporter chr5 514577-511252 F EGN_Mt100125 20111014	GO:0006810|transport GO:0055085|transmembrane transport	GO:0005215|transporter activity GO:0005351|sugar:hydrogen symporter activity GO:0015144|carbohydrate transmembrane transporter activity GO:0022857|transmembrane transporter activity GO:0022891|substrate-specific transmembrane transporter activity	GO:0016020|membrane GO:0016021|integral to membrane
pt2_02613	A	A1S	Potri.001G249000	Potri.001G249000(AS)	POPTR_0001s25610	NA	NA	AT5G17910.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G29620.1). | chr5:5927906-5932292 FORWARD LENGTH=1342	LOC_Os01g59670.1	protein|expressed protein	IMGA|Medtr5g069750.1	hypothetical protein chr5 28604570-28600034 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_02614	A	A1S	Potri.001G249100	Potri.001G249100(AS)	POPTR_0001s25620	sp|Q9FIM2|FTSH9_ARATH	ATP-dependent zinc metalloprotease FTSH 9, chloroplastic OS=Arabidopsis thaliana GN=FTSH9 PE=2 SV=1	AT5G58870.1	| Symbols: ftsh9 | FTSH protease 9 | chr5:23770080-23773719 REVERSE LENGTH=806	LOC_Os02g43350.1	protein|OsFtsH7 FtsH protease, homologue of AtFtsH7, expressed	IMGA|Medtr5g069780.2	Cell division protease ftsH-like protein chr5 28612359-28618409 F EGN_Mt100125 20111014	GO:0006508|proteolysis GO:0030163|protein catabolic process	GO:0000166|nucleotide binding GO:0004176|ATP-dependent peptidase activity GO:0004222|metalloendopeptidase activity GO:0005524|ATP binding GO:0008237|metallopeptidase activity GO:0008270|zinc ion binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity	GO:0009507|chloroplast GO:0009941|chloroplast envelope GO:0016020|membrane GO:0016021|integral to membrane
pt2_02615	A	A1S	Potri.001G249200	Potri.001G249200(AS)	POPTR_0001s25630	sp|O82392|THIC_ARATH	Phosphomethylpyrimidine synthase, chloroplastic OS=Arabidopsis thaliana GN=THIC PE=1 SV=1	AT2G29630.3	| Symbols: THIC | thiaminC | chr2:12667395-12669569 FORWARD LENGTH=644	LOC_Os03g47610.4	protein|thiamine biosynthesis protein thiC, putative, expressed	NA	NA	GO:0000023|maltose metabolic process GO:0006098|pentose-phosphate shunt GO:0009228|thiamine biosynthetic process GO:0010266|response to vitamin B1 GO:0016045|detection of bacterium GO:0019252|starch biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019760|glucosinolate metabolic process GO:0043085|positive regulation of catalytic activity	GO:0003824|catalytic activity GO:0051536|iron-sulfur cluster binding GO:0080041|ADP-ribose pyrophosphohydrolase activity	GO:0009507|chloroplast GO:0009536|plastid GO:0009570|chloroplast stroma
pt2_02616	A	A1S	Potri.001G249300	Potri.001G249300(AS)	POPTR_0001s25640	NA	NA	AT1G07310.1	| Symbols: | Calcium-dependent lipid-binding (CaLB domain) family protein | chr1:2247775-2248833 REVERSE LENGTH=352	LOC_Os01g63470.1	protein|C2 domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_02617	A	A1S	Potri.001G249400	Potri.001G249400(AS)	POPTR_0001s25650	sp|O82391|JOSL_ARATH	Josephin-like protein OS=Arabidopsis thaliana GN=At2g29640 PE=2 SV=1	AT2G29640.1	| Symbols: JOSL | JOSEPHIN-like protein | chr2:12671206-12673300 FORWARD LENGTH=360	LOC_Os03g15850.1	protein|josephin, putative, expressed	IMGA|Medtr5g069880.1	Josephin-like protein chr5 28635148-28636001 E EGN_Mt100125 20111014	NA	GO:0003674|molecular_function GO:0008242|omega peptidase activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02618	A	A1S	Potri.001G249500	Potri.001G249500(AS)	POPTR_0001s25660	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_02619	A	A1S	Potri.001G249600	Potri.001G249600(AS)	POPTR_0001s25670	NA	NA	NA	NA	NA	NA	IMGA|Medtr5g069990.1	hypothetical protein chr5 28674645-28673983 F EGN_Mt100125 20111014	GO:0006364|rRNA processing GO:0009637|response to blue light GO:0009902|chloroplast relocation GO:0010027|thylakoid membrane organization GO:0010114|response to red light GO:0010218|response to far red light GO:0015979|photosynthesis GO:0030003|cellular cation homeostasis GO:0034660|ncRNA metabolic process GO:0070838|divalent metal ion transport	NA	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009579|thylakoid GO:0009941|chloroplast envelope
pt2_02620	A	A2S	Potri.001G249700	Potri.001G249700(AS) Potri.009G043700(DS)	POPTR_0001s25680	sp|P48422|C86A1_ARATH	Cytochrome P450 86A1 OS=Arabidopsis thaliana GN=CYP86A1 PE=1 SV=2	AT5G58860.1	| Symbols: CYP86A1, CYP86 | cytochrome P450, family 86, subfamily A, polypeptide 1 | chr5:23765999-23767997 REVERSE LENGTH=513	LOC_Os01g63540.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g070010.1	Cytochrome P450 chr5 28679240-28682095 F EGN_Mt100125 20111014	GO:0000041|transition metal ion transport GO:0006631|fatty acid metabolic process GO:0010345|suberin biosynthetic process GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0018685|alkane 1-monooxygenase activity GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005773|vacuole
pt2_02621	A	A2S	Potri.001G249800	Potri.001G249800(AS) Potri.009G043800(DS)	POPTR_0001s25690	sp|O82390|ANTR1_ARATH	Sodium-dependent phosphate transport protein 1, chloroplastic OS=Arabidopsis thaliana GN=ANTR1 PE=1 SV=1	AT2G29650.1	| Symbols: ANTR1, PHT4;1 | phosphate transporter 4;1 | chr2:12673685-12676003 REVERSE LENGTH=512	LOC_Os01g17240.1	protein|transporter, major facilitator family, putative, expressed	IMGA|Medtr5g069630.1	Major facilitator superfamily protein chr5 28542849-28535154 F EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0002831|regulation of response to biotic stimulus GO:0006612|protein targeting to membrane GO:0009416|response to light stimulus GO:0009595|detection of biotic stimulus GO:0009624|response to nematode GO:0009697|salicylic acid biosynthetic process GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0015706|nitrate transport GO:0031348|negative regulation of defense response GO:0042631|cellular response to water deprivation GO:0042742|defense response to bacterium GO:0043900|regulation of multi-organism process GO:0050832|defense response to fungus GO:0055085|transmembrane transport	GO:0005315|inorganic phosphate transmembrane transporter activity GO:0005351|sugar:hydrogen symporter activity GO:0008514|organic anion transmembrane transporter activity GO:0015144|carbohydrate transmembrane transporter activity GO:0030504|inorganic diphosphate transmembrane transporter activity	GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009579|thylakoid GO:0016020|membrane
pt2_02622	A	A1S	Potri.001G249900	Potri.001G249900(AS)	POPTR_0001s25700	NA	NA	AT2G29660.1	| Symbols: | zinc finger (C2H2 type) family protein | chr2:12679346-12680467 FORWARD LENGTH=373	LOC_Os03g15790.1	protein|ZOS3-08 - C2H2 zinc finger protein, expressed	IMGA|AC229724_1046.1	C2H2 zinc finger protein AC229724.12 177025-179406 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0016132|brassinosteroid biosynthetic process	GO:0003676|nucleic acid binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005576|extracellular region GO:0005622|intracellular GO:0031225|anchored to membrane
pt2_02623	A	A1S	Potri.001G250000	Potri.001G250000(AS)	POPTR_0001s25710	sp|Q9S7L2|MYB98_ARATH	Transcription factor MYB98 OS=Arabidopsis thaliana GN=MYB98 PE=2 SV=1	AT5G58850.1	| Symbols: ATMYB119, MYB119 | myb domain protein 119 | chr5:23763945-23765441 FORWARD LENGTH=430	LOC_Os06g06740.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr5g070020.1	Myb chr5 28685196-28683043 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_02624	A	A2S	Potri.T142400	Potri.T142400(AS) Potri.001G250100(AS)	POPTR_0001s25720	NA	NA	AT2G29670.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr2:12682309-12684745 REVERSE LENGTH=536	LOC_Os01g63620.1	protein|expressed protein	IMGA|Medtr5g082130.1	hypothetical protein chr5 34248903-34246001 F EGN_Mt100125 20111014	NA	NA	GO:0009507|chloroplast
pt2_02625	A	A2S	Potri.001G250200	Potri.001G250200(AS) Potri.T142500(AS)	POPTR_0001s25730	sp|O89033|CDC6_MOUSE	Cell division control protein 6 homolog OS=Mus musculus GN=Cdc6 PE=2 SV=2	AT1G07270.1	| Symbols: | Cell division control, Cdc6 | chr1:2229757-2232897 REVERSE LENGTH=505	LOC_Os01g63710.3	protein|CDC6 - Putative DNA replication initiation protein, expressed	NA	NA	GO:0006260|DNA replication GO:0051726|regulation of cell cycle	GO:0005515|protein binding GO:0005524|ATP binding	GO:0005634|nucleus
pt2_02626	A	A1S	Potri.001G250300	Potri.001G250300(AS)	POPTR_0001s25740	sp|P32069|TRPX_ARATH	Anthranilate synthase component I-2, chloroplastic OS=Arabidopsis thaliana GN=ASA2 PE=2 SV=1	AT2G29690.1	| Symbols: ASA2, ATHANSYNAB | anthranilate synthase 2 | chr2:12693899-12696791 FORWARD LENGTH=621	LOC_Os03g61120.1	protein|anthranilate synthase component I-1, chloroplast precursor, putative, expressed	IMGA|Medtr1g114520.1	Anthranilate synthase alpha chr1 33223589-33216639 E EGN_Mt100125 20111014	GO:0000162|tryptophan biosynthetic process GO:0006567|threonine catabolic process GO:0009058|biosynthetic process GO:0009073|aromatic amino acid family biosynthetic process	GO:0004049|anthranilate synthase activity GO:0016833|oxo-acid-lyase activity	GO:0005950|anthranilate synthase complex GO:0009507|chloroplast
pt2_02627	A	A3S	Potri.001G250400	Potri.001G250400(AS) Potri.T142600(AS) Potri.009G044500(DS)	POPTR_0001s25750	sp|Q9ST43|PH1_ARATH	Pleckstrin homology domain-containing protein 1 OS=Arabidopsis thaliana GN=PH1 PE=2 SV=2	AT2G29700.1	| Symbols: ATPH1, PH1 | pleckstrin homologue 1 | chr2:12697571-12698008 FORWARD LENGTH=145	LOC_Os01g63800.1	protein|pleckstrin homology domain-containing protein, putative, expressed	IMGA|Medtr5g082470.1	Pleckstrin homology domain-containing protein chr5 34428785-34427997 F EGN_Mt100125 20111014	GO:0007165|signal transduction	GO:0005543|phospholipid binding GO:0035091|phosphatidylinositol binding	GO:0005737|cytoplasm
pt2_02628	A	A1S	Potri.001G250500	Potri.001G250500(AS)	POPTR_0001s25760	sp|P0A5R8|PHLD_MYCTU	Phospholipase C 4 OS=Mycobacterium tuberculosis GN=plcD PE=3 SV=1	AT1G07230.1	| Symbols: NPC1 | non-specific phospholipase C1 | chr1:2220509-2222778 REVERSE LENGTH=533	LOC_Os03g61130.1	protein|phosphoesterase family protein, putative, expressed	NA	NA	NA	GO:0016788|hydrolase activity, acting on ester bonds	GO:0005886|plasma membrane
pt2_02629	B	B1S	Potri.001G250600	Potri.001G250600(BS)	POPTR_0001s25770	sp|Q9FVN0|AMT13_SOLLC	Ammonium transporter 1 member 3 OS=Solanum lycopersicum GN=AMT1-3 PE=2 SV=1	AT4G13510.1	| Symbols: AMT1;1, ATAMT1, ATAMT1;1 | ammonium transporter 1;1 | chr4:7858220-7859725 FORWARD LENGTH=501	LOC_Os04g43070.1	protein|ammonium transporter protein, putative, expressed	IMGA|Medtr1g079760.1	Ammonium transporter chr1 19960149-19946940 E EGN_Mt100125 20111014	GO:0001666|response to hypoxia GO:0006612|protein targeting to membrane GO:0006810|transport GO:0006820|anion transport GO:0006862|nucleotide transport GO:0006888|ER to Golgi vesicle-mediated transport GO:0006944|cellular membrane fusion GO:0009737|response to abscisic acid stimulus GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010311|lateral root formation GO:0010363|regulation of plant-type hypersensitive response GO:0015695|organic cation transport GO:0015696|ammonium transport GO:0015802|basic amino acid transport GO:0031347|regulation of defense response GO:0043069|negative regulation of programmed cell death GO:0043090|amino acid import GO:0043269|regulation of ion transport GO:0051258|protein polymerization GO:0080167|response to karrikin GO:0080181|lateral root branching	GO:0008519|ammonium transmembrane transporter activity	GO:0005634|nucleus GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane
pt2_02630	A	A1S	Potri.001G250700	Potri.001G250700(AS)	POPTR_0001s25780	sp|Q84T03|RH27_ORYSJ	DEAD-box ATP-dependent RNA helicase 27 OS=Oryza sativa subsp. japonica GN=Os03g0802700 PE=3 SV=1	AT3G18600.1	| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr3:6399724-6403007 REVERSE LENGTH=568	LOC_Os03g58810.1	protein|DEAD-box ATP-dependent RNA helicase, putative, expressed	IMGA|Medtr5g092560.1	ATP-dependent RNA helicase DBP4 chr5 39389139-39383328 E EGN_Mt100125 20111014	GO:0001510|RNA methylation GO:0009220|pyrimidine ribonucleotide biosynthetic process GO:0009909|regulation of flower development GO:0034968|histone lysine methylation	GO:0003676|nucleic acid binding GO:0004386|helicase activity GO:0005524|ATP binding GO:0008026|ATP-dependent helicase activity	GO:0005634|nucleus GO:0005730|nucleolus
pt2_02631	A	A1S	Potri.001G250700	Potri.001G250700(AS)	POPTR_0001s25780	sp|Q84T03|RH27_ORYSJ	DEAD-box ATP-dependent RNA helicase 27 OS=Oryza sativa subsp. japonica GN=Os03g0802700 PE=3 SV=1	AT3G18600.1	| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr3:6399724-6403007 REVERSE LENGTH=568	LOC_Os03g58810.1	protein|DEAD-box ATP-dependent RNA helicase, putative, expressed	IMGA|Medtr5g092560.1	ATP-dependent RNA helicase DBP4 chr5 39389139-39383328 E EGN_Mt100125 20111014	GO:0001510|RNA methylation GO:0009220|pyrimidine ribonucleotide biosynthetic process GO:0009909|regulation of flower development GO:0034968|histone lysine methylation	GO:0003676|nucleic acid binding GO:0004386|helicase activity GO:0005524|ATP binding GO:0008026|ATP-dependent helicase activity	GO:0005634|nucleus GO:0005730|nucleolus
pt2_02632	A	A1S	Potri.001G250800	Potri.001G250800(AS)	POPTR_0001s25790	NA	NA	AT3G47160.1	| Symbols: | RING/U-box superfamily protein | chr3:17360238-17361879 REVERSE LENGTH=245	LOC_Os07g46700.3	protein|zinc finger, RING-type, putative, expressed	NA	NA	NA	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_02633	A	A1S	Potri.001G250900	Potri.001G250900(AS)	POPTR_0001s25800	sp|Q56Y11|DDPS2_ARATH	Dehydrodolichyl diphosphate synthase 2 OS=Arabidopsis thaliana GN=At5g58770 PE=2 SV=2	AT5G58770.1	| Symbols: | Undecaprenyl pyrophosphate synthetase family protein | chr5:23734396-23735495 FORWARD LENGTH=310	LOC_Os01g63830.1	protein|dehydrodolichyl diphosphate synthase, putative, expressed	IMGA|Medtr5g070210.1	Dehydrodolichyl diphosphate synthase chr5 28739423-28737316 E EGN_Mt100125 20111014	GO:0006744|ubiquinone biosynthetic process GO:0019408|dolichol biosynthetic process	GO:0016765|transferase activity, transferring alkyl or aryl (other than methyl) groups GO:0045547|dehydrodolichyl diphosphate synthase activity	GO:0009507|chloroplast
pt2_02634	A	A1S	Potri.001G251000	Potri.001G251000(AS)	POPTR_0001s25810	sp|Q6NQ88|DDB2_ARATH	Protein DAMAGED DNA-BINDING 2 OS=Arabidopsis thaliana GN=DDB2 PE=1 SV=1	AT5G58760.1	| Symbols: DDB2 | damaged DNA binding 2 | chr5:23730741-23733606 REVERSE LENGTH=557	LOC_Os01g04870.1	protein|WD domain, G-beta repeat domain containing protein, expressed	IMGA|Medtr5g070310.1	DAMAGED DNA-BINDING protein chr5 28772528-28777580 E EGN_Mt100125 20111014	GO:0006281|DNA repair GO:0010224|response to UV-B	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0008270|zinc ion binding	GO:0005634|nucleus GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_02635	A	A1S	Potri.001G251100	Potri.001G251100(AS)	POPTR_0001s25820	sp|Q7PC88|AB31G_ARATH	ABC transporter G family member 31 OS=Arabidopsis thaliana GN=ABCG31 PE=2 SV=1	AT2G29940.1	| Symbols: PDR3, ATPDR3 | pleiotropic drug resistance 3 | chr2:12760139-12766455 FORWARD LENGTH=1426	LOC_Os01g42370.1	protein|pleiotropic drug resistance protein, putative, expressed	IMGA|Medtr5g070320.1	Pleiotropic drug resistance ABC transporter family protein chr5 28781263-28793818 H EGN_Mt100125 20111014	GO:0006855|drug transmembrane transport	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0009506|plasmodesma GO:0016020|membrane
pt2_02636	A	A1S	Potri.001G251200	Potri.001G251200(AS)	POPTR_0001s25830	sp|Q93Z81|CAX3_ARATH	Vacuolar cation/proton exchanger 3 OS=Arabidopsis thaliana GN=CAX3 PE=1 SV=1	AT3G51860.1	| Symbols: CAX3, ATHCX1, CAX1-LIKE, ATCAX3 | cation exchanger 3 | chr3:19239458-19242519 FORWARD LENGTH=459	LOC_Os01g37690.1	protein|sodium/calcium exchanger protein, putative, expressed	IMGA|Medtr5g070330.1	Vacuolar cation/proton exchanger chr5 28799924-28794477 E EGN_Mt100125 20111014	GO:0006812|cation transport GO:0006816|calcium ion transport GO:0006833|water transport GO:0006882|cellular zinc ion homeostasis GO:0007030|Golgi organization GO:0009624|response to nematode GO:0009631|cold acclimation GO:0009651|response to salt stress GO:0009750|response to fructose stimulus GO:0019761|glucosinolate biosynthetic process GO:0030003|cellular cation homeostasis GO:0030026|cellular manganese ion homeostasis GO:0032880|regulation of protein localization GO:0044242|cellular lipid catabolic process GO:0055062|phosphate ion homeostasis GO:0055085|transmembrane transport GO:0070838|divalent metal ion transport	GO:0005515|protein binding GO:0008324|cation transmembrane transporter activity GO:0015085|calcium ion transmembrane transporter activity GO:0015368|calcium:cation antiporter activity GO:0015369|calcium:hydrogen antiporter activity	GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0009507|chloroplast GO:0009705|plant-type vacuole membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_02637	A	A1S	Potri.001G251200	Potri.001G251200(AS)	POPTR_0001s25830	sp|Q93Z81|CAX3_ARATH	Vacuolar cation/proton exchanger 3 OS=Arabidopsis thaliana GN=CAX3 PE=1 SV=1	AT3G51860.1	| Symbols: CAX3, ATHCX1, CAX1-LIKE, ATCAX3 | cation exchanger 3 | chr3:19239458-19242519 FORWARD LENGTH=459	LOC_Os01g37690.1	protein|sodium/calcium exchanger protein, putative, expressed	IMGA|Medtr5g070330.1	Vacuolar cation/proton exchanger chr5 28799924-28794477 E EGN_Mt100125 20111014	GO:0006812|cation transport GO:0006816|calcium ion transport GO:0006833|water transport GO:0006882|cellular zinc ion homeostasis GO:0007030|Golgi organization GO:0009624|response to nematode GO:0009631|cold acclimation GO:0009651|response to salt stress GO:0009750|response to fructose stimulus GO:0019761|glucosinolate biosynthetic process GO:0030003|cellular cation homeostasis GO:0030026|cellular manganese ion homeostasis GO:0032880|regulation of protein localization GO:0044242|cellular lipid catabolic process GO:0055062|phosphate ion homeostasis GO:0055085|transmembrane transport GO:0070838|divalent metal ion transport	GO:0005515|protein binding GO:0008324|cation transmembrane transporter activity GO:0015085|calcium ion transmembrane transporter activity GO:0015368|calcium:cation antiporter activity GO:0015369|calcium:hydrogen antiporter activity	GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0009507|chloroplast GO:0009705|plant-type vacuole membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_02638	A	A2S	Potri.001G251200	Potri.001G251200(AS) Potri.009G045800(BS)	POPTR_0001s25830	sp|Q93Z81|CAX3_ARATH	Vacuolar cation/proton exchanger 3 OS=Arabidopsis thaliana GN=CAX3 PE=1 SV=1	AT3G51860.1	| Symbols: CAX3, ATHCX1, CAX1-LIKE, ATCAX3 | cation exchanger 3 | chr3:19239458-19242519 FORWARD LENGTH=459	LOC_Os01g37690.1	protein|sodium/calcium exchanger protein, putative, expressed	IMGA|Medtr5g070330.1	Vacuolar cation/proton exchanger chr5 28799924-28794477 E EGN_Mt100125 20111014	GO:0006812|cation transport GO:0006816|calcium ion transport GO:0006833|water transport GO:0006882|cellular zinc ion homeostasis GO:0007030|Golgi organization GO:0009624|response to nematode GO:0009631|cold acclimation GO:0009651|response to salt stress GO:0009750|response to fructose stimulus GO:0019761|glucosinolate biosynthetic process GO:0030003|cellular cation homeostasis GO:0030026|cellular manganese ion homeostasis GO:0032880|regulation of protein localization GO:0044242|cellular lipid catabolic process GO:0055062|phosphate ion homeostasis GO:0055085|transmembrane transport GO:0070838|divalent metal ion transport	GO:0005515|protein binding GO:0008324|cation transmembrane transporter activity GO:0015085|calcium ion transmembrane transporter activity GO:0015368|calcium:cation antiporter activity GO:0015369|calcium:hydrogen antiporter activity	GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0009507|chloroplast GO:0009705|plant-type vacuole membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_02639	A	A1S	Potri.001G251300	Potri.001G251300(AS)	POPTR_0001s25840	NA	NA	AT5G58740.1	| Symbols: | HSP20-like chaperones superfamily protein | chr5:23725936-23727528 REVERSE LENGTH=158	LOC_Os01g47770.2	protein|CS domain containing protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005737|cytoplasm
pt2_02640	A	A1S	Potri.001G251400	Potri.001G251400(AS)	POPTR_0001s25850	sp|Q9FKK2|AGL62_ARATH	Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana GN=AGL62 PE=1 SV=1	AT5G60440.1	| Symbols: AGL62 | AGAMOUS-like 62 | chr5:24306329-24307520 FORWARD LENGTH=299	LOC_Os02g06860.1	protein|OsMADS80 - MADS-box family gene with M-alpha type-box, expressed	IMGA|Medtr5g045560.1	Agamous-like MADS-box protein AGL62 chr5 19572496-19573209 H EGN_Mt100125 20111014	GO:0009960|endosperm development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_02641	A	A1S	Potri.001G251500	Potri.001G251500(AS)	POPTR_0001s25860	NA	NA	AT5G58730.1	| Symbols: | pfkB-like carbohydrate kinase family protein | chr5:23723627-23725324 REVERSE LENGTH=353	LOC_Os03g52760.1	protein|kinase, pfkB family, putative, expressed	IMGA|Medtr5g070350.1	5-dehydro-2-deoxygluconokinase chr5 28805008-28810139 E EGN_Mt100125 20111014	GO:0010264|myo-inositol hexakisphosphate biosynthetic process	GO:0016301|kinase activity GO:0016773|phosphotransferase activity, alcohol group as acceptor	NA
pt2_02642	A	A1S	Potri.001G251600	Potri.001G251600(AS)	POPTR_0001s25870	sp|O80877|EF4L1_ARATH	Protein ELF4-LIKE 1 OS=Arabidopsis thaliana GN=EFL1 PE=2 SV=1	AT2G29950.1	| Symbols: ELF4-L1 | ELF4-like 1 | chr2:12767790-12768167 FORWARD LENGTH=125	LOC_Os11g40610.4	protein|EARLY flowering protein, putative, expressed	NA	NA	GO:0008150|biological_process GO:0042753|positive regulation of circadian rhythm	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02643	C	C1S	Potri.001G251600	Potri.001G251600(CS)	sp|O80877|EF4L1_ARATH	Protein ELF4-LIKE 1 OS=Arabidopsis thaliana GN=EFL1 PE=2 SV=1	AT2G29950.1	| Symbols: ELF4-L1 | ELF4-like 1 | chr2:12767790-12768167 FORWARD LENGTH=125	LOC_Os11g40610.4	protein|EARLY flowering protein, putative, expressed	NA	NA	GO:0008150|biological_process GO:0042753|positive regulation of circadian rhythm	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02644	A	A1S	Potri.001G251600	Potri.001G251600(AS)	POPTR_0001s25870	sp|O80877|EF4L1_ARATH	Protein ELF4-LIKE 1 OS=Arabidopsis thaliana GN=EFL1 PE=2 SV=1	AT2G29950.1	| Symbols: ELF4-L1 | ELF4-like 1 | chr2:12767790-12768167 FORWARD LENGTH=125	LOC_Os11g40610.4	protein|EARLY flowering protein, putative, expressed	NA	NA	GO:0008150|biological_process GO:0042753|positive regulation of circadian rhythm	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02645	A	A1S	Potri.001G251700	Potri.001G251700(AS)	POPTR_0001s25880	sp|Q9SP02|CP20A_ARATH	Peptidyl-prolyl cis-trans isomerase CYP20-1 OS=Arabidopsis thaliana GN=CYP20-1 PE=1 SV=1	AT5G58710.1	| Symbols: ROC7 | rotamase CYP 7 | chr5:23717840-23719495 FORWARD LENGTH=204	LOC_Os06g49480.2	protein|peptidyl-prolyl cis-trans isomerase, putative, expressed	IMGA|AC225458_18.1	Peptidyl-prolyl cis-trans isomerase AC225458.11 44405-42269 E EGN_Mt100125 20111014	GO:0006457|protein folding GO:0006623|protein targeting to vacuole	GO:0003755|peptidyl-prolyl cis-trans isomerase activity	GO:0005737|cytoplasm GO:0005771|multivesicular body GO:0005783|endoplasmic reticulum GO:0005795|Golgi stack GO:0005829|cytosol GO:0016020|membrane
pt2_02646	G	G1	NA	NA	POPTR_0001s25890	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02647	A	A1S	Potri.001G252000	Potri.001G252000(AS)	POPTR_0001s25900	sp|Q29AU6|RUMI_DROPS	O-glucosyltransferase rumi OS=Drosophila pseudoobscura pseudoobscura GN=rumi PE=3 SV=1	AT1G07220.1	| Symbols: | Arabidopsis thaliana protein of unknown function (DUF821) | chr1:2217073-2219379 REVERSE LENGTH=507	LOC_Os05g05690.1	protein|DTA2, putative, expressed	IMGA|Medtr5g010500.1	KTEL motif-containing protein chr5 2579004-2576004 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_02648	A	A1S	Potri.001G252100	Potri.001G252100(AS)	POPTR_0001s25910	sp|Q944C1|PLCD4_ARATH	Phosphoinositide phospholipase C 4 OS=Arabidopsis thaliana GN=PLC4 PE=2 SV=2	AT5G58700.1	| Symbols: ATPLC4, PLC4 | phosphatidylinositol-speciwc phospholipase C4 | chr5:23713144-23716057 REVERSE LENGTH=597	LOC_Os07g49330.1	protein|phospholipase C, putative, expressed	IMGA|Medtr5g082620.1	Phosphoinositide phospholipase C chr5 34536930-34542293 E EGN_Mt100125 20111014	GO:0006629|lipid metabolic process GO:0007165|signal transduction GO:0035556|intracellular signal transduction GO:0042732|D-xylose metabolic process GO:0051645|Golgi localization GO:0051646|mitochondrion localization GO:0060151|peroxisome localization	GO:0004435|phosphatidylinositol phospholipase C activity GO:0004629|phospholipase C activity GO:0008081|phosphoric diester hydrolase activity	GO:0005886|plasma membrane
pt2_02649	A	A1S	Potri.001G252200	Potri.001G252200(AS)	POPTR_0001s25920	sp|Q8GV43|PLCD6_ARATH	Phosphoinositide phospholipase C 6 OS=Arabidopsis thaliana GN=PLC6 PE=2 SV=2	AT2G40116.1	| Symbols: | Phosphoinositide-specific phospholipase C family protein | chr2:16751782-16754311 FORWARD LENGTH=613	LOC_Os07g49330.1	protein|phospholipase C, putative, expressed	IMGA|Medtr5g082620.1	Phosphoinositide phospholipase C chr5 34536930-34542293 E EGN_Mt100125 20111014	GO:0006629|lipid metabolic process GO:0007165|signal transduction GO:0035556|intracellular signal transduction	GO:0004435|phosphatidylinositol phospholipase C activity GO:0004629|phospholipase C activity GO:0008081|phosphoric diester hydrolase activity	GO:0005634|nucleus
pt2_02650	B	B1S	Potri.001G252300	Potri.001G252300(BS)	POPTR_0001s25930	sp|Q39033|PLCD2_ARATH	Phosphoinositide phospholipase C 2 OS=Arabidopsis thaliana GN=PLC2 PE=1 SV=1	AT3G08510.2	| Symbols: ATPLC2, PLC2 | phospholipase C 2 | chr3:2582626-2585556 REVERSE LENGTH=581	LOC_Os07g49330.1	protein|phospholipase C, putative, expressed	IMGA|Medtr5g082620.1	Phosphoinositide phospholipase C chr5 34536930-34542293 E EGN_Mt100125 20111014	GO:0006629|lipid metabolic process GO:0007165|signal transduction GO:0035556|intracellular signal transduction GO:0051645|Golgi localization GO:0051646|mitochondrion localization GO:0060151|peroxisome localization	GO:0004435|phosphatidylinositol phospholipase C activity GO:0004629|phospholipase C activity GO:0008081|phosphoric diester hydrolase activity	GO:0005886|plasma membrane
pt2_02651	A	A1S	Potri.001G252400	Potri.001G252400(AS)	POPTR_0001s25940	sp|Q9LY50|ACCR3_ARATH	Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana GN=CCR3 PE=2 SV=1	AT3G55950.1	| Symbols: CCR3, ATCRR3 | CRINKLY4 related 3 | chr3:20753903-20756347 REVERSE LENGTH=814	LOC_Os05g03620.1	protein|TKL_IRAK_CR4L.4 - The CR4L subfamily has homology with Crinkly4, expressed	IMGA|Medtr5g082630.1	Receptor kinase-like protein chr5 34548824-34543745 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006612|protein targeting to membrane GO:0006944|cellular membrane fusion GO:0009723|response to ethylene stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0010363|regulation of plant-type hypersensitive response GO:0035556|intracellular signal transduction GO:0043069|negative regulation of programmed cell death	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0042803|protein homodimerization activity	GO:0005886|plasma membrane
pt2_02652	A	A1S	Potri.001G252500	Potri.001G252500(AS)	POPTR_0001s25950	sp|Q8EU05|CLPB_OCEIH	Chaperone protein ClpB OS=Oceanobacillus iheyensis (strain DSM 14371 / JCM 11309 / KCTC 3954 / HTE831) GN=clpB PE=3 SV=1	AT2G29970.1	| Symbols: | Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein | chr2:12776601-12779784 FORWARD LENGTH=1002	LOC_Os11g01330.1	protein|expressed protein	IMGA|Medtr5g071060.1	ATP-dependent Clp protease ATP-binding subunit clpL chr5 29144846-29149963 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0005524|ATP binding	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_02653	A	A1S	Potri.001G252600	Potri.001G252600(AS)	POPTR_0001s25960	sp|Q9LUZ4|C3H66_ARATH	Zinc finger CCCH domain-containing protein 66 OS=Arabidopsis thaliana GN=At5g58620 PE=2 SV=1	AT5G58620.1	| Symbols: | zinc finger (CCCH-type) family protein | chr5:23693959-23695782 FORWARD LENGTH=607	LOC_Os05g03760.1	protein|zinc finger family protein, putative, expressed	IMGA|Medtr5g071070.1	Zinc finger CCCH domain-containing protein chr5 29160023-29164070 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006888|ER to Golgi vesicle-mediated transport GO:0043090|amino acid import	GO:0003676|nucleic acid binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_02654	A	A1S	Potri.001G252800	Potri.001G252800(AS)	POPTR_0001s25970	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02655	A	A1S	Potri.001G252900	Potri.001G252900(AS)	POPTR_0001s25980	sp|P48619|FAD3C_RICCO	Omega-3 fatty acid desaturase, chloroplastic OS=Ricinus communis GN=FAD7A-1 PE=2 SV=1	AT5G05580.1	| Symbols: FAD8 | fatty acid desaturase 8 | chr5:1664331-1666345 FORWARD LENGTH=435	LOC_Os07g49310.1	protein|omega-3 fatty acid desaturase, chloroplast precursor, putative, expressed	IMGA|Medtr5g071170.1	Omega-3 fatty acid desaturase chr5 29225742-29223460 H EGN_Mt100125 20111014	GO:0006629|lipid metabolic process GO:0006633|fatty acid biosynthetic process GO:0009266|response to temperature stimulus GO:0055114|oxidation-reduction process	GO:0016717|oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water GO:0042389|omega-3 fatty acid desaturase activity	GO:0009507|chloroplast GO:0009941|chloroplast envelope
pt2_02656	A	A1S	Potri.001G253000	Potri.001G253000(AS)	POPTR_0001s25990	sp|Q9STZ2|SELT_ARATH	SelT-like protein OS=Arabidopsis thaliana GN=At3g47300 PE=2 SV=2	AT3G47300.1	| Symbols: SELT | SELT-like protein precursor | chr3:17428685-17429555 REVERSE LENGTH=209	LOC_Os01g61580.1	protein|selT-like protein precursor, putative, expressed	IMGA|Medtr5g071240.1	SelT-like protein chr5 29250746-29253788 F EGN_Mt100125 20111014	GO:0045454|cell redox homeostasis	GO:0008430|selenium binding	NA
pt2_02657	A	A1S	Potri.001G253100	Potri.001G253100(AS)	POPTR_0001s26000	sp|Q3SWX0|NIPA2_BOVIN	Magnesium transporter NIPA2 OS=Bos taurus GN=NIPA2 PE=2 SV=1	AT1G34470.1	| Symbols: | Protein of unknown function (DUF803) | chr1:12604574-12606758 FORWARD LENGTH=368	LOC_Os05g43790.1	protein|DUF803 domain containing, putative, expressed	IMGA|Medtr5g090020.1	Magnesium transporter NIPA2 chr5 38124854-38117514 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_02658	A	A1S	Potri.001G253200	Potri.001G253200(AS)	POPTR_0001s26010	sp|Q4QR75|EXOS9_RAT	Exosome complex component RRP45 OS=Rattus norvegicus GN=Exosc9 PE=2 SV=1	AT3G60500.3	| Symbols: CER7 | 3'-5'-exoribonuclease family protein | chr3:22354245-22356440 FORWARD LENGTH=438	LOC_Os02g34570.2	protein|exosome complex exonuclease, putative, expressed	NA	NA	GO:0006396|RNA processing GO:0010025|wax biosynthetic process	GO:0000175|3'-5'-exoribonuclease activity GO:0003723|RNA binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_02659	A	A1S	Potri.001G253200	Potri.001G253200(AS)	POPTR_0001s26010	sp|Q4QR75|EXOS9_RAT	Exosome complex component RRP45 OS=Rattus norvegicus GN=Exosc9 PE=2 SV=1	AT3G60500.3	| Symbols: CER7 | 3'-5'-exoribonuclease family protein | chr3:22354245-22356440 FORWARD LENGTH=438	LOC_Os02g34570.2	protein|exosome complex exonuclease, putative, expressed	NA	NA	GO:0006396|RNA processing GO:0010025|wax biosynthetic process	GO:0000175|3'-5'-exoribonuclease activity GO:0003723|RNA binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_02660	A	A1S	Potri.001G253300	Potri.001G253300(AS)	POPTR_0001s26020	sp|Q56YA5|SGAT_ARATH	Serine--glyoxylate aminotransferase OS=Arabidopsis thaliana GN=AGT1 PE=1 SV=2	AT2G13360.2	| Symbols: AGT, AGT1, SGAT | alanine:glyoxylate aminotransferase | chr2:5539417-5540902 REVERSE LENGTH=401	LOC_Os08g39300.4	protein|aminotransferase, putative, expressed	IMGA|Medtr5g090070.1	Alanine glyoxylate aminotransferase chr5 38151129-38148561 H EGN_Mt100125 20111014	GO:0006833|water transport GO:0008152|metabolic process GO:0009651|response to salt stress GO:0009750|response to fructose stimulus GO:0009853|photorespiration GO:0030003|cellular cation homeostasis GO:0070838|divalent metal ion transport	GO:0003824|catalytic activity GO:0004760|serine-pyruvate transaminase activity GO:0008453|alanine-glyoxylate transaminase activity GO:0030170|pyridoxal phosphate binding GO:0050281|serine-glyoxylate transaminase activity	GO:0005777|peroxisome GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0016020|membrane GO:0048046|apoplast
pt2_02661	A	A2S	Potri.001G253300	Potri.001G253300(AS) Potri.009G047700(DS)	POPTR_0001s26020	sp|Q56YA5|SGAT_ARATH	Serine--glyoxylate aminotransferase OS=Arabidopsis thaliana GN=AGT1 PE=1 SV=2	AT2G13360.2	| Symbols: AGT, AGT1, SGAT | alanine:glyoxylate aminotransferase | chr2:5539417-5540902 REVERSE LENGTH=401	LOC_Os08g39300.4	protein|aminotransferase, putative, expressed	IMGA|Medtr5g090070.1	Alanine glyoxylate aminotransferase chr5 38151129-38148561 H EGN_Mt100125 20111014	GO:0006833|water transport GO:0008152|metabolic process GO:0009651|response to salt stress GO:0009750|response to fructose stimulus GO:0009853|photorespiration GO:0030003|cellular cation homeostasis GO:0070838|divalent metal ion transport	GO:0003824|catalytic activity GO:0004760|serine-pyruvate transaminase activity GO:0008453|alanine-glyoxylate transaminase activity GO:0030170|pyridoxal phosphate binding GO:0050281|serine-glyoxylate transaminase activity	GO:0005777|peroxisome GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0016020|membrane GO:0048046|apoplast
pt2_02662	A	A2S	Potri.001G253300	Potri.001G253300(AS) Potri.009G047700(DS)	POPTR_0001s26020	sp|Q56YA5|SGAT_ARATH	Serine--glyoxylate aminotransferase OS=Arabidopsis thaliana GN=AGT1 PE=1 SV=2	AT2G13360.2	| Symbols: AGT, AGT1, SGAT | alanine:glyoxylate aminotransferase | chr2:5539417-5540902 REVERSE LENGTH=401	LOC_Os08g39300.4	protein|aminotransferase, putative, expressed	IMGA|Medtr5g090070.1	Alanine glyoxylate aminotransferase chr5 38151129-38148561 H EGN_Mt100125 20111014	GO:0006833|water transport GO:0008152|metabolic process GO:0009651|response to salt stress GO:0009750|response to fructose stimulus GO:0009853|photorespiration GO:0030003|cellular cation homeostasis GO:0070838|divalent metal ion transport	GO:0003824|catalytic activity GO:0004760|serine-pyruvate transaminase activity GO:0008453|alanine-glyoxylate transaminase activity GO:0030170|pyridoxal phosphate binding GO:0050281|serine-glyoxylate transaminase activity	GO:0005777|peroxisome GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0016020|membrane GO:0048046|apoplast
pt2_02663	A	A2S	Potri.001G253300	Potri.001G253300(AS) Potri.009G047700(DS)	POPTR_0001s26020	sp|Q56YA5|SGAT_ARATH	Serine--glyoxylate aminotransferase OS=Arabidopsis thaliana GN=AGT1 PE=1 SV=2	AT2G13360.2	| Symbols: AGT, AGT1, SGAT | alanine:glyoxylate aminotransferase | chr2:5539417-5540902 REVERSE LENGTH=401	LOC_Os08g39300.4	protein|aminotransferase, putative, expressed	IMGA|Medtr5g090070.1	Alanine glyoxylate aminotransferase chr5 38151129-38148561 H EGN_Mt100125 20111014	GO:0006833|water transport GO:0008152|metabolic process GO:0009651|response to salt stress GO:0009750|response to fructose stimulus GO:0009853|photorespiration GO:0030003|cellular cation homeostasis GO:0070838|divalent metal ion transport	GO:0003824|catalytic activity GO:0004760|serine-pyruvate transaminase activity GO:0008453|alanine-glyoxylate transaminase activity GO:0030170|pyridoxal phosphate binding GO:0050281|serine-glyoxylate transaminase activity	GO:0005777|peroxisome GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0016020|membrane GO:0048046|apoplast
pt2_02664	A	A1S	Potri.001G253300	Potri.001G253300(AS)	POPTR_0001s26020	sp|Q56YA5|SGAT_ARATH	Serine--glyoxylate aminotransferase OS=Arabidopsis thaliana GN=AGT1 PE=1 SV=2	AT2G13360.2	| Symbols: AGT, AGT1, SGAT | alanine:glyoxylate aminotransferase | chr2:5539417-5540902 REVERSE LENGTH=401	LOC_Os08g39300.4	protein|aminotransferase, putative, expressed	IMGA|Medtr5g090070.1	Alanine glyoxylate aminotransferase chr5 38151129-38148561 H EGN_Mt100125 20111014	GO:0006833|water transport GO:0008152|metabolic process GO:0009651|response to salt stress GO:0009750|response to fructose stimulus GO:0009853|photorespiration GO:0030003|cellular cation homeostasis GO:0070838|divalent metal ion transport	GO:0003824|catalytic activity GO:0004760|serine-pyruvate transaminase activity GO:0008453|alanine-glyoxylate transaminase activity GO:0030170|pyridoxal phosphate binding GO:0050281|serine-glyoxylate transaminase activity	GO:0005777|peroxisome GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0016020|membrane GO:0048046|apoplast
pt2_02665	A	A1S	Potri.001G253400	Potri.001G253400(AS)	POPTR_0001s26030	sp|O14647|CHD2_HUMAN	Chromodomain-helicase-DNA-binding protein 2 OS=Homo sapiens GN=CHD2 PE=1 SV=2	AT2G13370.1	| Symbols: CHR5 | chromatin remodeling 5 | chr2:5544601-5555543 REVERSE LENGTH=1724	LOC_Os07g46590.1	protein|SNF2 family N-terminal domain containing protein, expressed	IMGA|Medtr5g090090.1	Chromodomain-helicase-DNA-binding protein chr5 38180814-38157967 E EGN_Mt100125 20111014	GO:0006333|chromatin assembly or disassembly	GO:0003676|nucleic acid binding GO:0003677|DNA binding GO:0003682|chromatin binding GO:0004386|helicase activity GO:0005524|ATP binding	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_02666	A	A3S	Potri.001G253500	Potri.001G253500(AS) Potri.001G253600(AS) Potri.016G112800(DS)	POPTR_0001s26040	sp|P49972|SR542_SOLLC	Signal recognition particle 54 kDa protein 2 OS=Solanum lycopersicum PE=2 SV=1	AT1G48900.1	| Symbols: | Signal recognition particle, SRP54 subunit protein | chr1:18084972-18087743 REVERSE LENGTH=495	LOC_Os01g56600.1	protein|signal recognition particle 54 kDa protein, putative, expressed	NA	NA	GO:0006614|SRP-dependent cotranslational protein targeting to membrane GO:0006617|SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition GO:0010267|production of ta-siRNAs involved in RNA interference GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0051607|defense response to virus	GO:0000166|nucleotide binding GO:0003729|mRNA binding GO:0005525|GTP binding GO:0008312|7S RNA binding GO:0017111|nucleoside-triphosphatase activity	GO:0005737|cytoplasm GO:0005786|signal recognition particle, endoplasmic reticulum targeting GO:0005829|cytosol GO:0048500|signal recognition particle
pt2_02667	B	B1S	Potri.001G253700	Potri.001G253700(BS)	POPTR_0001s26050	sp|Q9SR43|PFBS_ARATH	Phytochromobilin:ferredoxin oxidoreductase, chloroplastic OS=Arabidopsis thaliana GN=HY2 PE=2 SV=1	AT3G09150.2	| Symbols: HY2, GUN3 | phytochromobilin:ferredoxin oxidoreductase, chloroplast / phytochromobilin synthase (HY2) | chr3:2803665-2805333 FORWARD LENGTH=329	LOC_Os01g72090.1	protein|phycoerythrobilin ferredoxin oxidoreductase, putative, expressed	IMGA|Medtr5g097080.1	Phytochromobilin:ferredoxin oxidoreductase chr5 41462176-41457723 E EGN_Mt100125 20111014	GO:0010019|chloroplast-nucleus signaling pathway GO:0010024|phytochromobilin biosynthetic process GO:0055114|oxidation-reduction process	GO:0016636|oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor GO:0050619|phytochromobilin:ferredoxin oxidoreductase activity GO:0050897|cobalt ion binding	GO:0009507|chloroplast
pt2_02668	A	A2S	Potri.001G253800	Potri.001G253800(AS) Potri.001G253900(AA)	POPTR_0001s26060	sp|Q8GW61|STP14_ARATH	Sugar transport protein 14 OS=Arabidopsis thaliana GN=STP14 PE=2 SV=2	AT1G77210.2	| Symbols: STP14 | sugar transporter 14 | chr1:29009036-29010980 REVERSE LENGTH=504	LOC_Os09g24924.1	protein|transporter family protein, putative, expressed	IMGA|Medtr5g094760.1	Hexose transporter chr5 40377854-40375022 H EGN_Mt100125 20111014	GO:0006810|transport GO:0055085|transmembrane transport	GO:0005215|transporter activity GO:0005351|sugar:hydrogen symporter activity GO:0005354|galactose transmembrane transporter activity GO:0015144|carbohydrate transmembrane transporter activity GO:0022857|transmembrane transporter activity GO:0022891|substrate-specific transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_02669	A	A2S	Potri.001G253900	Potri.001G253900(AS) Potri.001G253800(AA)	POPTR_0001s26070	sp|O80934|Y2766_ARATH	Uncharacterized protein At2g37660, chloroplastic OS=Arabidopsis thaliana GN=At2g37660 PE=1 SV=2	AT4G31530.1	| Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr4:15282281-15284064 FORWARD LENGTH=324	LOC_Os03g23980.1	protein|NAD dependent epimerase/dehydratase family protein, putative, expressed	NA	NA	GO:0006694|steroid biosynthetic process GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0003854|3-beta-hydroxy-delta5-steroid dehydrogenase activity GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope
pt2_02670	A	A1S	Potri.001G254000	Potri.001G254000(AS)	POPTR_0001s26090	sp|C0ZIY1|PSUG_BREBN	Pseudouridine-5'-phosphate glycosidase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=psuG PE=3 SV=1	AT1G50510.1	| Symbols: | indigoidine synthase A family protein | chr1:18716578-18719060 FORWARD LENGTH=330	LOC_Os08g39420.2	protein|uncharacterized protein yeiN, putative, expressed	NA	NA	NA	GO:0016798|hydrolase activity, acting on glycosyl bonds	GO:0005777|peroxisome GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_02671	A	A2S	Potri.001G254100	Potri.001G254100(AS) Potri.006G044400(DS)	POPTR_0001s26100	sp|P27057|GAST1_SOLLC	Protein GAST1 OS=Solanum lycopersicum GN=GAST1 PE=2 SV=1	AT1G74670.1	| Symbols: | Gibberellin-regulated family protein | chr1:28053378-28053893 FORWARD LENGTH=101	LOC_Os05g31280.1	protein|GASR5 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed	IMGA|Medtr5g095990.1	Gibberellin induced protein chr5 40930558-40929229 I EGN_Mt100125 20111014	GO:0009739|response to gibberellin stimulus GO:0009740|gibberellic acid mediated signaling pathway GO:0009744|response to sucrose stimulus GO:0009749|response to glucose stimulus GO:0009750|response to fructose stimulus GO:0010162|seed dormancy process GO:0080167|response to karrikin	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_02672	G	G1	NA	NA	POPTR_0001s26110	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02673	G	G1	NA	NA	POPTR_0001s26120	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02674	A	A1S	Potri.001G254300	Potri.001G254300(AS)	POPTR_0001s26130	NA	NA	AT5G12400.1	| Symbols: | DNA binding;zinc ion binding;DNA binding | chr5:4013813-4021018 FORWARD LENGTH=1602	LOC_Os07g46690.1	protein|PHD-finger family protein, expressed	NA	NA	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0006355|regulation of transcription, DNA-dependent GO:0007155|cell adhesion GO:0010090|trichome morphogenesis GO:0010228|vegetative to reproductive phase transition of meristem GO:0016926|protein desumoylation GO:0044036|cell wall macromolecule metabolic process GO:0045010|actin nucleation GO:0048765|root hair cell differentiation GO:0050665|hydrogen peroxide biosynthetic process GO:0071555|cell wall organization	GO:0003677|DNA binding GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_02675	A	A2S	Potri.001G254400	Potri.001G254400(AS) Potri.009G049400(DS)	POPTR_0001s26140	sp|O22437|CHLD_PEA	Magnesium-chelatase subunit chlD, chloroplastic OS=Pisum sativum GN=CHLD PE=2 SV=1	AT1G08520.1	| Symbols: ALB1, ALB-1V, V157, PDE166, CHLD | ALBINA 1 | chr1:2696538-2700819 FORWARD LENGTH=760	LOC_Os03g59640.1	protein|magnesium-chelatase subunit chlD, chloroplast precursor, putative, expressed	IMGA|Medtr5g009070.1	Magnesium-chelatase subunit chlD chr5 1845628-1832329 E EGN_Mt100125 20111014	GO:0009690|cytokinin metabolic process GO:0015979|photosynthesis GO:0015995|chlorophyll biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016851|magnesium chelatase activity GO:0017111|nucleoside-triphosphatase activity	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009570|chloroplast stroma GO:0010007|magnesium chelatase complex
pt2_02676	A	A1S	Potri.001G254500	Potri.001G254500(AS)	POPTR_0001s26150	sp|Q9LJZ5|UBC19_ARATH	Ubiquitin-conjugating enzyme E2 19 OS=Arabidopsis thaliana GN=UBC19 PE=1 SV=1	AT3G20060.1	| Symbols: UBC19 | ubiquitin-conjugating enzyme19 | chr3:7002927-7004283 REVERSE LENGTH=181	LOC_Os01g16650.1	protein|ubiquitin-conjugating enzyme, putative, expressed	IMGA|Medtr5g009020.1	Ubiquitin carrier protein chr5 1819536-1817598 F EGN_Mt100125 20111014	GO:0000226|microtubule cytoskeleton organization GO:0008283|cell proliferation GO:0042023|DNA endoreduplication GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0043248|proteasome assembly GO:0051510|regulation of unidimensional cell growth GO:0051788|response to misfolded protein	GO:0004842|ubiquitin-protein ligase activity GO:0016881|acid-amino acid ligase activity	GO:0005634|nucleus
pt2_02677	A	A1S	Potri.001G254600	Potri.001G254600(AS)	POPTR_0001s26170	sp|Q99J36|THUM1_MOUSE	THUMP domain-containing protein 1 OS=Mus musculus GN=Thumpd1 PE=1 SV=1	AT5G12410.1	| Symbols: | THUMP domain-containing protein | chr5:4021974-4023950 REVERSE LENGTH=376	LOC_Os11g36060.1	protein|THUMP domain-containing protein, putative, expressed	IMGA|Medtr5g009010.1	THUMP domain containing protein chr5 1810716-1815384 F EGN_Mt100125 20111014	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0006310|DNA recombination GO:0006406|mRNA export from nucleus GO:0007126|meiosis GO:0008150|biological_process GO:0009086|methionine biosynthetic process GO:0009560|embryo sac egg cell differentiation GO:0009640|photomorphogenesis GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009909|regulation of flower development GO:0009933|meristem structural organization GO:0010048|vernalization response GO:0010074|maintenance of meristem identity GO:0010162|seed dormancy process GO:0010182|sugar mediated signaling pathway GO:0010228|vegetative to reproductive phase transition of meristem GO:0010332|response to gamma radiation GO:0010388|cullin deneddylation GO:0016567|protein ubiquitination GO:0019915|lipid storage GO:0032204|regulation of telomere maintenance GO:0043247|telomere maintenance in response to DNA damage GO:0050826|response to freezing GO:0051604|protein maturation	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005829|cytosol
pt2_02678	C	C1S	Potri.001G254700	Potri.001G254700(CS)	sp|P02519|HSP11_SOYBN	17.3 kDa class I heat shock protein OS=Glycine max GN=HSP17.3-B PE=3 SV=1	AT2G29500.1	| Symbols: | HSP20-like chaperones superfamily protein | chr2:12633279-12633740 REVERSE LENGTH=153	LOC_Os03g16020.1	protein|hsp20/alpha crystallin family protein, putative, expressed	IMGA|Medtr5g064060.1	class I heat shock protein chr5 25868107-25868924 F EGN_Mt100125 20111014	GO:0006979|response to oxidative stress GO:0009408|response to heat	NA	GO:0005737|cytoplasm
pt2_02679	A	A1S	Potri.001G254800	Potri.001G254800(AS)	POPTR_0001s26190	sp|Q9LPS1|HXK3_ARATH	Hexokinase-3 OS=Arabidopsis thaliana GN=At1g50460 PE=1 SV=1	AT1G50460.1	| Symbols: HKL1, ATHKL1 | hexokinase-like 1 | chr1:18694031-18697429 FORWARD LENGTH=498	LOC_Os01g71320.1	protein|hexokinase, putative, expressed	IMGA|Medtr5g009000.1	Hexokinase chr5 1801579-1806713 E EGN_Mt100125 20111014	GO:0006970|response to osmotic stress GO:0009409|response to cold GO:0009651|response to salt stress GO:0080147|root hair cell development	GO:0004396|hexokinase activity GO:0005515|protein binding GO:0005524|ATP binding	GO:0005739|mitochondrion GO:0009536|plastid GO:0031307|integral to mitochondrial outer membrane
pt2_02680	A	A1S	Potri.001G255000	Potri.001G255000(AS)	POPTR_0001s26200	sp|Q5R8D8|DNJC7_PONAB	DnaJ homolog subfamily C member 7 OS=Pongo abelii GN=DNAJC7 PE=2 SV=1	AT5G12430.1	| Symbols: TPR16 | Heat shock protein DnaJ with tetratricopeptide repeat | chr5:4028475-4034086 REVERSE LENGTH=1165	LOC_Os05g31062.1	protein|DNAJ heat shock N-terminal domain-containing protein, putative, expressed	IMGA|Medtr5g063200.1	Small glutamine-rich tetratricopeptide repeat-containing protein chr5 25499833-25496222 E EGN_Mt100125 20111014	GO:0006457|protein folding GO:0007155|cell adhesion GO:0010090|trichome morphogenesis GO:0010228|vegetative to reproductive phase transition of meristem GO:0016926|protein desumoylation GO:0045010|actin nucleation GO:0048765|root hair cell differentiation GO:0050665|hydrogen peroxide biosynthetic process GO:0071555|cell wall organization	GO:0031072|heat shock protein binding	NA
pt2_02681	A	A1S	Potri.001G255100	Potri.001G255100(AS)	POPTR_0001s26210	sp|P52407|E13B_HEVBR	Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform OS=Hevea brasiliensis GN=HGN1 PE=1 SV=2	AT4G16260.1	| Symbols: | Glycosyl hydrolase superfamily protein | chr4:9200180-9201441 REVERSE LENGTH=344	LOC_Os01g71400.1	protein|glycosyl hydrolases family 17, putative, expressed	IMGA|Medtr5g085580.1	"Glucan endo-1,3-beta-glucosidase" chr5 35975309-35973056 F EGN_Mt100125 20111014	GO:0002215|defense response to nematode GO:0005975|carbohydrate metabolic process GO:0009651|response to salt stress GO:0009817|defense response to fungus, incompatible interaction	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0043169|cation binding	GO:0005618|cell wall GO:0005774|vacuolar membrane
pt2_02682	C	C1S	Potri.001G255200	Potri.001G255200(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02683	A	A1S	Potri.001G255300	Potri.001G255300(AS)	POPTR_0001s26230	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02684	B	B1S	Potri.001G255400	Potri.001G255400(BS)	POPTR_0001s26240	sp|Q94CJ8|C3H55_ARATH	Zinc finger CCCH domain-containing protein 55 OS=Arabidopsis thaliana GN=At5g12440 PE=2 SV=3	AT3G21100.2	| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr3:7399162-7401870 FORWARD LENGTH=602	LOC_Os03g21140.1	protein|RNA-binding zinc finger protein, putative, expressed	IMGA|Medtr5g008900.1	Zinc finger CCCH domain-containing protein chr5 1751944-1756293 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02685	A	A1S	Potri.001G255500	Potri.001G255500(AS)	POPTR_0001s26250	sp|Q9SV09|C3H46_ARATH	Zinc finger CCCH domain-containing protein 46 OS=Arabidopsis thaliana GN=At3g51950 PE=1 SV=1	AT3G51950.2	| Symbols: | Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein | chr3:19278244-19280407 REVERSE LENGTH=540	LOC_Os03g21140.1	protein|RNA-binding zinc finger protein, putative, expressed	IMGA|Medtr5g008900.1	Zinc finger CCCH domain-containing protein chr5 1751944-1756293 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0008150|biological_process	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding GO:0008270|zinc ion binding	GO:0005575|cellular_component
pt2_02686	A	A2S	Potri.001G255600	Potri.001G255600(AS) Potri.009G051000(DS)	POPTR_0001s26260	sp|B5DGI7|RBM8A_SALSA	RNA-binding protein 8A OS=Salmo salar GN=rbm8a PE=2 SV=1	AT1G51510.1	| Symbols: Y14 | RNA-binding (RRM/RBD/RNP motifs) family protein | chr1:19103072-19104753 REVERSE LENGTH=202	LOC_Os05g04850.1	protein|RNA recognition motif containing protein, putative, expressed	IMGA|Medtr5g008890.1	RNA-binding protein 8A chr5 1739768-1744173 F EGN_Mt100125 20111014	GO:0010628|positive regulation of gene expression	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding GO:0005515|protein binding	GO:0005634|nucleus GO:0005654|nucleoplasm GO:0005730|nucleolus GO:0005737|cytoplasm GO:0016604|nuclear body GO:0035145|exon-exon junction complex
pt2_02687	A	A1A	Potri.001G255700	Potri.001G255700(AA)	POPTR_0001s26270	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02688	A	A1S	Potri.001G255700	Potri.001G255700(AS)	POPTR_0001s26280	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02689	A	A1S	Potri.001G255800	Potri.001G255800(AS)	POPTR_0001s26290	sp|Q8RWI9|AB15G_ARATH	ABC transporter G family member 15 OS=Arabidopsis thaliana GN=ABCG15 PE=2 SV=2	AT3G21090.1	| Symbols: | ABC-2 type transporter family protein | chr3:7391497-7394933 REVERSE LENGTH=691	LOC_Os05g13520.1	protein|white-brown complex homolog protein 12, putative, expressed	IMGA|contig_58220_1.1	ABC transporter G family member contig_58220 2510-271 H PREDN 20111014	GO:0009062|fatty acid catabolic process GO:0080167|response to karrikin	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0005886|plasma membrane GO:0016020|membrane
pt2_02690	A	A1S	Potri.001G255900	Potri.001G255900(AS)	POPTR_0001s26300	sp|Q8RWI9|AB15G_ARATH	ABC transporter G family member 15 OS=Arabidopsis thaliana GN=ABCG15 PE=2 SV=2	AT3G21090.1	| Symbols: | ABC-2 type transporter family protein | chr3:7391497-7394933 REVERSE LENGTH=691	LOC_Os05g13520.1	protein|white-brown complex homolog protein 12, putative, expressed	IMGA|Medtr1g115790.1	ABC transporter G family member chr1 33538389-33535794 E EGN_Mt100125 20111014	GO:0009062|fatty acid catabolic process GO:0080167|response to karrikin	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0005886|plasma membrane GO:0016020|membrane
pt2_02691	A	A2S	Potri.001G256000	Potri.001G256000(AS) Potri.009G051400(DS)	POPTR_0001s26320	sp|Q91X20|ASH2L_MOUSE	Set1/Ash2 histone methyltransferase complex subunit ASH2 OS=Mus musculus GN=Ash2l PE=1 SV=1	AT1G51450.1	| Symbols: TRO | TRAUCO | chr1:19074399-19076220 FORWARD LENGTH=509	LOC_Os12g04930.1	protein|ASH-like SPRY domain containing protein, putative, expressed	NA	NA	GO:0009790|embryo development GO:0009793|embryo development ending in seed dormancy GO:0010228|vegetative to reproductive phase transition of meristem GO:0016571|histone methylation GO:0060776|simple leaf morphogenesis GO:0080182|histone H3-K4 trimethylation	GO:0031490|chromatin DNA binding	GO:0005576|extracellular region GO:0005634|nucleus GO:0048188|Set1C/COMPASS complex
pt2_02692	A	A1S	Potri.001G256100	Potri.001G256100(AS)	POPTR_0001s26330	sp|Q56YN3|NADK1_ARATH	NAD(H) kinase 1 OS=Arabidopsis thaliana GN=NADK1 PE=1 SV=2	AT3G21070.2	| Symbols: NADK1 | NAD kinase 1 | chr3:7380434-7383874 REVERSE LENGTH=524	LOC_Os01g72690.2	protein|NAD kinase, putative, expressed	NA	NA	GO:0006741|NADP biosynthetic process GO:0008152|metabolic process GO:0019363|pyridine nucleotide biosynthetic process	GO:0003951|NAD+ kinase activity GO:0042736|NADH kinase activity	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_02693	A	A1S	Potri.001G256200	Potri.001G256200(AS)	POPTR_0001s26340	NA	NA	AT5G12460.1	| Symbols: | Protein of unknown function (DUF604) | chr5:4043057-4044583 FORWARD LENGTH=441	LOC_Os04g48950.1	protein|fringe-related protein, putative, expressed	IMGA|Medtr5g010070.1	hypothetical protein chr5 2381571-2385382 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_02694	A	A1S	Potri.001G256300	Potri.001G256300(AS)	POPTR_0001s26350	NA	NA	AT5G12470.1	| Symbols: | Protein of unknown function (DUF3411) | chr5:4044950-4047290 REVERSE LENGTH=386	LOC_Os01g72710.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009536|plastid GO:0009706|chloroplast inner membrane GO:0009941|chloroplast envelope
pt2_02695	A	A1S	Potri.001G256400	Potri.001G256400(AS)	POPTR_0001s26360	sp|Q9S9N9|CCR1_ARATH	Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1	AT5G19440.1	| Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr5:6556493-6558123 FORWARD LENGTH=326	LOC_Os01g34480.1	protein|NAD dependent epimerase/dehydratase family protein, putative, expressed	IMGA|Medtr5g072620.1	Dihydroflavonol 4-reductase-like protein chr5 29922618-29926018 E EGN_Mt100125 20111014	GO:0044237|cellular metabolic process GO:0046482|para-aminobenzoic acid metabolic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0004022|alcohol dehydrogenase (NAD) activity GO:0050662|coenzyme binding	GO:0005794|Golgi apparatus GO:0005829|cytosol GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_02696	G	G1	NA	NA	POPTR_0001s26365	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02697	A	A1S	Potri.001G256500	Potri.001G256500(AS)	POPTR_0001s26370	NA	NA	NA	NA	NA	NA	IMGA|Medtr5g054570.1	PIF-like protein chr5 21936286-21937344 H EGN_Mt100125 20111014	NA	NA	NA
pt2_02698	A	A1S	Potri.001G256600	Potri.001G256600(AS)	POPTR_0001s26380	sp|Q39013|NAC2_ARATH	NAC domain-containing protein 2 OS=Arabidopsis thaliana GN=NAC002 PE=2 SV=2	AT3G04070.2	| Symbols: anac047, NAC047 | NAC domain containing protein 47 | chr3:1061573-1062976 REVERSE LENGTH=343	LOC_Os05g34830.1	protein|No apical meristem protein, putative, expressed	IMGA|Medtr5g041940.1	NAC domain protein chr5 18013715-18012368 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006865|amino acid transport GO:0007275|multicellular organismal development GO:0010260|organ senescence	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02699	C	C1S	Potri.001G256700	Potri.001G256700(CS)	NA	NA	AT1G51405.1	| Symbols: | myosin-related | chr1:19057780-19059582 FORWARD LENGTH=487	LOC_Os03g11770.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_02700	A	A1S	Potri.001G256800	Potri.001G256800(AS)	POPTR_0001s26400	sp|Q93VB8|RS22_ARATH	40S ribosomal protein S2-2 OS=Arabidopsis thaliana GN=RPS2B PE=2 SV=1	AT1G58684.1	| Symbols: | Ribosomal protein S5 family protein | chr1:21770021-21771217 REVERSE LENGTH=284	LOC_Os03g59310.1	protein|ribosomal protein, putative, expressed	NA	NA	GO:0001510|RNA methylation GO:0006412|translation	GO:0003723|RNA binding GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005730|nucleolus GO:0005829|cytosol GO:0005840|ribosome GO:0009506|plasmodesma GO:0015935|small ribosomal subunit GO:0016020|membrane GO:0022626|cytosolic ribosome GO:0022627|cytosolic small ribosomal subunit
pt2_02701	C	C1S	Potri.001G256900	Potri.001G256900(CS)	sp|P31336|PST2_GOSHI	Photosystem II 5 kDa protein, chloroplastic OS=Gossypium hirsutum GN=PSBT PE=4 SV=1	AT1G51400.1	| Symbols: | Photosystem II 5 kD protein | chr1:19052172-19052492 REVERSE LENGTH=106	NA	NA	NA	NA	GO:0009611|response to wounding GO:0010193|response to ozone GO:0010224|response to UV-B	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009543|chloroplast thylakoid lumen GO:0030095|chloroplast photosystem II
pt2_02702	A	A2S	Potri.001G257000	Potri.001G257000(AS) Potri.009G052600(BS)	POPTR_0001s26420	sp|O82802|SIR1_TOBAC	Sulfite reductase 1 [ferredoxin], chloroplastic OS=Nicotiana tabacum GN=SIR1 PE=1 SV=1	AT5G04590.1	| Symbols: SIR | sulfite reductase | chr5:1319404-1322298 FORWARD LENGTH=642	LOC_Os05g42350.1	protein|ferredoxin--nitrite reductase, putative, expressed	NA	NA	GO:0006096|glycolysis GO:0006833|water transport GO:0006972|hyperosmotic response GO:0007030|Golgi organization GO:0009266|response to temperature stimulus GO:0009409|response to cold GO:0009651|response to salt stress GO:0009684|indoleacetic acid biosynthetic process GO:0016126|sterol biosynthetic process GO:0019344|cysteine biosynthetic process GO:0019419|sulfate reduction GO:0019761|glucosinolate biosynthetic process GO:0046686|response to cadmium ion GO:0055114|oxidation-reduction process	GO:0005507|copper ion binding GO:0016002|sulfite reductase activity GO:0016491|oxidoreductase activity GO:0020037|heme binding GO:0050311|sulfite reductase (ferredoxin) activity GO:0051536|iron-sulfur cluster binding GO:0051539|4 iron, 4 sulfur cluster binding	GO:0005737|cytoplasm GO:0009507|chloroplast GO:0009536|plastid GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope GO:0010319|stromule GO:0016020|membrane GO:0048046|apoplast
pt2_02703	A	A2S	Potri.001G257100	Potri.001G257100(AS) Potri.009G052700(DS)	POPTR_0001s26430	sp|Q38873|CDPK7_ARATH	Calcium-dependent protein kinase 7 OS=Arabidopsis thaliana GN=CPK7 PE=1 SV=1	AT5G12480.1	| Symbols: CPK7 | calmodulin-domain protein kinase 7 | chr5:4047817-4050035 REVERSE LENGTH=535	LOC_Os07g38120.1	protein|CAMK_CAMK_like.34 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	IMGA|Medtr5g089320.1	Calcium dependent protein kinase chr5 37772048-37769598 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006499|N-terminal protein myristoylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004683|calmodulin-dependent protein kinase activity GO:0004713|protein tyrosine kinase activity GO:0005509|calcium ion binding GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_02704	A	A1S	Potri.001G257300	Potri.001G257300(AS)	POPTR_0001s26440	NA	NA	AT4G37860.1	| Symbols: | SPT2 chromatin protein | chr4:17800589-17801907 REVERSE LENGTH=354	LOC_Os02g44530.1	protein|expressed protein	IMGA|Medtr5g030610.1	hypothetical protein chr5 12631657-12626771 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_02705	A	A1S	Potri.001G257400	Potri.001G257400(AS)	POPTR_0001s26450	NA	NA	AT2G01870.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 11 Blast hits to 11 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:389846-390319 REVERSE LENGTH=157	NA	NA	NA	NA	GO:0000023|maltose metabolic process GO:0008150|biological_process GO:0019252|starch biosynthetic process	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane
pt2_02706	A	A1S	Potri.001G257500	Potri.001G257500(AS)	POPTR_0001s26460	NA	NA	AT3G20920.1	| Symbols: | translocation protein-related | chr3:7328763-7330698 REVERSE LENGTH=365	LOC_Os02g23890.1	protein|protein transporter, putative, expressed	NA	NA	GO:0015031|protein transport	GO:0008565|protein transporter activity	GO:0005634|nucleus GO:0005886|plasma membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_02707	A	A1S	Potri.001G257600	Potri.001G257600(AS)	POPTR_0001s26480	sp|Q9LXV5|NFYA1_ARATH	Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana GN=NFYA1 PE=2 SV=1	AT5G12840.4	| Symbols: HAP2A, ATHAP2A, NF-YA1 | nuclear factor Y, subunit A1 | chr5:4051147-4052961 REVERSE LENGTH=271	LOC_Os03g48970.2	protein|nuclear transcription factor Y subunit, putative, expressed	IMGA|Medtr1g056530.1	Nuclear transcription factor Y subunit A-10 chr1 14860365-14857641 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009790|embryo development GO:0009793|embryo development ending in seed dormancy GO:0010262|somatic embryogenesis GO:0048316|seed development GO:0048510|regulation of timing of transition from vegetative to reproductive phase GO:0055046|microgametogenesis	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus GO:0016602|CCAAT-binding factor complex
pt2_02708	A	A1S	Potri.001G257700	Potri.001G257700(AS)	POPTR_0001s26490	NA	NA	AT3G20898.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G51355.1); Has 66 Blast hits to 66 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:7323796-7324203 FORWARD LENGTH=108	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02709	B	B2S	Potri.001G257800	Potri.001G257800(BS) Potri.001G257700(BA)	POPTR_0001s26500	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02710	A	A1S	Potri.001G257900	Potri.001G257900(AS)	POPTR_0001s26510	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02711	A	A1S	Potri.001G258000	Potri.001G258000(AS)	POPTR_0001s26520	sp|Q60HC3|HNRPF_MACFA	Heterogeneous nuclear ribonucleoprotein F OS=Macaca fascicularis GN=HNRNPF PE=2 SV=3	AT3G20890.1	| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr3:7319939-7321054 FORWARD LENGTH=292	LOC_Os11g03890.1	protein|RNA recognition motif containing protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_02712	C	C1A	Potri.001G258000	Potri.001G258000(CA)	sp|Q60HC3|HNRPF_MACFA	Heterogeneous nuclear ribonucleoprotein F OS=Macaca fascicularis GN=HNRNPF PE=2 SV=3	AT3G20890.1	| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr3:7319939-7321054 FORWARD LENGTH=292	LOC_Os11g03890.1	protein|RNA recognition motif containing protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_02713	A	A3S	Potri.001G258100	Potri.001G258100(AS) Potri.009G053300(DS) Potri.009G053400(DA)	POPTR_0001s26540	NA	NA	AT5G19855.1	| Symbols: | Chaperonin-like RbcX protein | chr5:6712166-6713445 REVERSE LENGTH=203	LOC_Os03g59320.1	protein|expressed protein	NA	NA	GO:0061077|chaperone-mediated protein folding	GO:0044183|protein binding involved in protein folding	GO:0009570|chloroplast stroma
pt2_02714	A	A1S	Potri.001G258200	Potri.001G258200(AS)	POPTR_0001s26545	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02715	A	A1S	Potri.001G258300	Potri.001G258300(AS)	POPTR_0001s26550	NA	NA	AT1G51350.1	| Symbols: | ARM repeat superfamily protein | chr1:19035851-19038738 FORWARD LENGTH=666	LOC_Os11g41990.1	protein|armadillo/beta-catenin-like repeat family protein, expressed	IMGA|Medtr5g096860.1	Armadillo repeat-containing protein chr5 41352243-41344673 E EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0009543|chloroplast thylakoid lumen
pt2_02716	A	A1S	Potri.001G258400	Potri.001G258400(AS)	POPTR_0001s26560	sp|Q9LXV4|C3H56_ARATH	Zinc finger CCCH domain-containing protein 56 OS=Arabidopsis thaliana GN=At5g12850 PE=2 SV=1	AT5G12850.1	| Symbols: | CCCH-type zinc finger protein with ARM repeat domain | chr5:4057068-4059188 FORWARD LENGTH=706	LOC_Os03g49170.3	protein|zinc finger family protein, putative, expressed	IMGA|Medtr5g082830.1	Zinc finger CCCH domain-containing protein chr5 34631506-34633512 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003676|nucleic acid binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_02717	A	A1S	Potri.001G258500	Potri.001G258500(AS)	POPTR_0001s26570	sp|Q7XJN6|PP197_ARATH	Pentatricopeptide repeat-containing protein At2g40720 OS=Arabidopsis thaliana GN=PCMP-E26 PE=2 SV=1	AT2G40720.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr2:16987269-16989851 FORWARD LENGTH=860	LOC_Os01g10800.1	protein|pentatricopeptide, putative, expressed	IMGA|Medtr1g071240.1	Pentatricopeptide repeat-containing protein chr1 17511913-17505644 H EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_02718	A	A2S	Potri.001G258600	Potri.001G258600(AS) Potri.009G053800(DS)	POPTR_0001s26580	sp|Q41364|SOT1_SPIOL	2-oxoglutarate/malate translocator, chloroplastic OS=Spinacia oleracea GN=SODIT1 PE=1 SV=1	AT5G12860.1	| Symbols: DiT1 | dicarboxylate transporter 1 | chr5:4059927-4061919 REVERSE LENGTH=557	LOC_Os12g33080.1	protein|2-oxoglutarate/malate translocator, chloroplast precursor, putative, expressed	NA	NA	GO:0006499|N-terminal protein myristoylation GO:0006833|water transport GO:0009624|response to nematode GO:0009651|response to salt stress GO:0009750|response to fructose stimulus GO:0015729|oxaloacetate transport GO:0015742|alpha-ketoglutarate transport GO:0015743|malate transport GO:0016049|cell growth GO:0016126|sterol biosynthetic process GO:0019676|ammonia assimilation cycle GO:0030243|cellulose metabolic process GO:0071423|malate transmembrane transport	GO:0015131|oxaloacetate transmembrane transporter activity GO:0015139|alpha-ketoglutarate transmembrane transporter activity GO:0015140|malate transmembrane transporter activity GO:0015367|oxoglutarate:malate antiporter activity	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009536|plastid GO:0009941|chloroplast envelope GO:0016020|membrane
pt2_02719	A	A1S	Potri.001G258700	Potri.001G258700(AS)	POPTR_0001s26590	sp|Q9LXV2|MYB46_ARATH	Transcription factor MYB46 OS=Arabidopsis thaliana GN=MYB46 PE=2 SV=1	AT5G12870.1	| Symbols: ATMYB46, MYB46 | myb domain protein 46 | chr5:4062939-4064939 REVERSE LENGTH=280	LOC_Os12g33070.1	protein|myb-like DNA-binding domain containing protein, putative, expressed	IMGA|Medtr5g079670.1	Myb-like transcription factor chr5 33056957-33055245 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009751|response to salicylic acid stimulus GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process GO:0045893|positive regulation of transcription, DNA-dependent GO:0050832|defense response to fungus GO:1901348|positive regulation of secondary cell wall biogenesis GO:2000652|regulation of secondary cell wall biogenesis	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_02720	A	A1S	Potri.001G258800	Potri.001G258800(AS)	POPTR_0001s26600	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02721	A	A1S	Potri.001G258900	Potri.001G258900(AS)	POPTR_0001s26610	sp|Q9C6I8|NOG1_ARATH	Nucleolar GTP-binding protein 1 OS=Arabidopsis thaliana GN=At1g50920 PE=2 SV=1	AT1G50920.1	| Symbols: | Nucleolar GTP-binding protein | chr1:18870555-18872570 FORWARD LENGTH=671	LOC_Os06g09570.1	protein|nucleolar GTP-binding protein 1, putative, expressed	NA	NA	GO:0001510|RNA methylation	GO:0000166|nucleotide binding GO:0005525|GTP binding	GO:0005634|nucleus GO:0016020|membrane
pt2_02722	A	A1S	Potri.001G259000	Potri.001G259000(AS)	POPTR_0001s26620	sp|O51625|MNMA_BORBU	tRNA-specific 2-thiouridylase MnmA OS=Borrelia burgdorferi (strain ATCC 35210 / B31 / CIP 102532 / DSM 4680) GN=mnmA PE=3 SV=1	AT1G51310.1	| Symbols: | transferases;tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferases | chr1:19019185-19021735 REVERSE LENGTH=497	LOC_Os03g07850.1	protein|tRNA methyltransferase, putative, expressed	NA	NA	GO:0006396|RNA processing GO:0008033|tRNA processing	GO:0004808|tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity GO:0016740|transferase activity	GO:0005737|cytoplasm GO:0009507|chloroplast
pt2_02723	A	A1S	Potri.001G259100	Potri.001G259100(AS)	POPTR_0001s26630	sp|Q70E96|AL3F1_ARATH	Aldehyde dehydrogenase family 3 member F1 OS=Arabidopsis thaliana GN=ALDH3F1 PE=2 SV=2	AT4G36250.1	| Symbols: ALDH3F1 | aldehyde dehydrogenase 3F1 | chr4:17151029-17153381 FORWARD LENGTH=484	LOC_Os02g43194.1	protein|aldehyde dehydrogenase, putative, expressed	IMGA|Medtr1g014320.1	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase chr1 3773177-3769070 E EGN_Mt100125 20111014	GO:0006081|cellular aldehyde metabolic process GO:0008152|metabolic process GO:0009612|response to mechanical stimulus GO:0019722|calcium-mediated signaling GO:0042631|cellular response to water deprivation GO:0055114|oxidation-reduction process	GO:0004028|3-chloroallyl aldehyde dehydrogenase activity GO:0004029|aldehyde dehydrogenase (NAD) activity GO:0004030|aldehyde dehydrogenase [NAD(P)+] activity GO:0016491|oxidoreductase activity	GO:0005737|cytoplasm GO:0005783|endoplasmic reticulum GO:0016020|membrane
pt2_02724	A	A1S	Potri.001G259200	Potri.001G259200(AS)	POPTR_0001s26640	sp|Q9SYC8|LPAT3_ARATH	1-acyl-sn-glycerol-3-phosphate acyltransferase 3 OS=Arabidopsis thaliana GN=LPAT3 PE=2 SV=1	AT1G51260.1	| Symbols: LPAT3 | lysophosphatidyl acyltransferase 3 | chr1:19003460-19005512 REVERSE LENGTH=376	LOC_Os11g41900.1	protein|acyltransferase, putative, expressed	NA	NA	GO:0006655|phosphatidylglycerol biosynthetic process GO:0008152|metabolic process	GO:0003841|1-acylglycerol-3-phosphate O-acyltransferase activity GO:0016746|transferase activity, transferring acyl groups	GO:0009507|chloroplast
pt2_02725	A	A1S	Potri.001G259300	Potri.001G259300(AS)	POPTR_0001s26650	NA	NA	AT2G28490.1	| Symbols: | RmlC-like cupins superfamily protein | chr2:12178812-12180983 REVERSE LENGTH=511	LOC_Os03g21790.1	protein|cupin domain containing protein, expressed	IMGA|Medtr5g019780.1	Vicilin-like antimicrobial peptides 2-3 chr5 7239907-7243213 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0045735|nutrient reservoir activity	GO:0005576|extracellular region GO:0009506|plasmodesma
pt2_02726	A	A1S	Potri.001G259400	Potri.001G259400(AS)	POPTR_0001s26660	NA	NA	AT2G28490.1	| Symbols: | RmlC-like cupins superfamily protein | chr2:12178812-12180983 REVERSE LENGTH=511	NA	NA	NA	NA	GO:0008150|biological_process	GO:0045735|nutrient reservoir activity	GO:0005576|extracellular region GO:0009506|plasmodesma
pt2_02727	A	A2S	Potri.001G259500	Potri.001G259500(AS) Potri.001G259700(BS)	POPTR_0001s26670	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02728	D	D1S	Potri.001G259600	Potri.001G259600(DS)	POPTR_0001s26680	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02729	A	A2S	Potri.001G259600	Potri.001G259600(AS) Potri.001G259700(DS)	POPTR_0001s26690	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02730	C	C1S	Potri.001G260500	Potri.001G260500(CS)	NA	NA	AT5G13800.1	| Symbols: PPH, CRN1 | pheophytinase | chr5:4452063-4454141 REVERSE LENGTH=484	LOC_Os06g24730.1	protein|hydrolase, alpha/beta fold family domain containing protein, expressed	NA	NA	GO:0015996|chlorophyll catabolic process	GO:0005515|protein binding GO:0016787|hydrolase activity GO:0080124|pheophytinase activity	GO:0009507|chloroplast
pt2_02731	A	A3S	Potri.001G260300	Potri.001G260300(AS) Potri.001G259900(AS) Potri.001G260600(BS)	POPTR_0001s26700	NA	NA	AT5G43210.1	| Symbols: | Excinuclease ABC, C subunit, N-terminal | chr5:17347567-17348379 FORWARD LENGTH=170	LOC_Os11g04935.1	protein|GIY-YIG catalytic domain containing protein, putative, expressed	NA	NA	GO:0006281|DNA repair	GO:0004518|nuclease activity	GO:0005622|intracellular GO:0005634|nucleus
pt2_02732	C	C1S	Potri.001G260000	Potri.001G260000(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02733	A	A1S	Potri.001G260400	Potri.001G260400(AS)	POPTR_0001s26710	sp|Q00962|POL_CAMVN	Enzymatic polyprotein OS=Cauliflower mosaic virus (strain NY8153) GN=ORF V PE=3 SV=1	NA	NA	LOC_Os02g19370.1	protein|retrotransposon protein, putative, unclassified	NA	NA	NA	NA	NA
pt2_02734	C	C2S	Potri.001G259600	Potri.001G259600(CS) Potri.001G259600(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02735	B	B2S	Potri.013G108200	Potri.013G108200(BS) Potri.012G000400(BA)	POPTR_0001s26725	sp|Q9LEQ3|CNG18_ARATH	Putative cyclic nucleotide-gated ion channel 18 OS=Arabidopsis thaliana GN=CNGC18 PE=2 SV=1	AT5G14870.1	| Symbols: CNGC18, ATCNGC18 | cyclic nucleotide-gated channel 18 | chr5:4808268-4810897 REVERSE LENGTH=706	LOC_Os02g54760.1	protein|cyclic nucleotide-gated ion channel 14, putative, expressed	IMGA|Medtr1g064240.1	CNGC5-like protein chr1 16479213-16483284 H EGN_Mt100125 20111014	GO:0006874|cellular calcium ion homeostasis GO:0009827|plant-type cell wall modification GO:0009860|pollen tube growth GO:0048610|cellular process involved in reproduction GO:0048868|pollen tube development	GO:0005216|ion channel activity GO:0005516|calmodulin binding GO:0030551|cyclic nucleotide binding	GO:0005886|plasma membrane GO:0016324|apical plasma membrane
pt2_02736	D	D1S	Potri.001G260100	Potri.001G260100(DS)	POPTR_0001s26740	sp|Q9SV07|ASAT1_ARATH	Acyl-CoA--sterol O-acyltransferase 1 OS=Arabidopsis thaliana GN=ASAT1 PE=1 SV=1	AT3G51970.1	| Symbols: ATSAT1, ASAT1, ATASAT1 | acyl-CoA sterol acyl transferase 1 | chr3:19284420-19285457 FORWARD LENGTH=345	LOC_Os02g25700.1	protein|O-acyltransferase, putative, expressed	IMGA|Medtr5g094140.1	hypothetical protein chr5 40078555-40077150 H EGN_Mt100125 20111014	GO:0008150|biological_process GO:0016127|sterol catabolic process GO:0034434|sterol esterification	GO:0005515|protein binding GO:0016746|transferase activity, transferring acyl groups	GO:0009507|chloroplast
pt2_02737	C	C1S	Potri.001G260400	Potri.001G260400(CS)	sp|Q00962|POL_CAMVN	Enzymatic polyprotein OS=Cauliflower mosaic virus (strain NY8153) GN=ORF V PE=3 SV=1	NA	NA	LOC_Os02g19370.1	protein|retrotransposon protein, putative, unclassified	NA	NA	NA	NA	NA
pt2_02738	G	G1	NA	NA	POPTR_0001s26760	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02739	B	B1S	Potri.001G260500	Potri.001G260500(BS)	POPTR_0001s26770	NA	NA	AT5G13800.1	| Symbols: PPH, CRN1 | pheophytinase | chr5:4452063-4454141 REVERSE LENGTH=484	LOC_Os06g24730.1	protein|hydrolase, alpha/beta fold family domain containing protein, expressed	NA	NA	GO:0015996|chlorophyll catabolic process	GO:0005515|protein binding GO:0016787|hydrolase activity GO:0080124|pheophytinase activity	GO:0009507|chloroplast
pt2_02740	A	A3S	Potri.001G260600	Potri.001G260600(AS) Potri.001G260300(BS) Potri.001G259900(BS)	POPTR_0001s26780	NA	NA	AT5G43210.1	| Symbols: | Excinuclease ABC, C subunit, N-terminal | chr5:17347567-17348379 FORWARD LENGTH=170	LOC_Os12g04934.1	protein|GIY-YIG catalytic domain containing protein, putative, expressed	NA	NA	GO:0006281|DNA repair	GO:0004518|nuclease activity	GO:0005622|intracellular GO:0005634|nucleus
pt2_02741	G	G3	NA	NA	POPTR_0001s26790	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02742	A	A1S	Potri.001G260700	Potri.001G260700(AS)	POPTR_0001s26800	sp|Q9SV07|ASAT1_ARATH	Acyl-CoA--sterol O-acyltransferase 1 OS=Arabidopsis thaliana GN=ASAT1 PE=1 SV=1	AT3G51970.1	| Symbols: ATSAT1, ASAT1, ATASAT1 | acyl-CoA sterol acyl transferase 1 | chr3:19284420-19285457 FORWARD LENGTH=345	LOC_Os02g25700.1	protein|O-acyltransferase, putative, expressed	IMGA|Medtr5g094140.1	hypothetical protein chr5 40078555-40077150 H EGN_Mt100125 20111014	GO:0008150|biological_process GO:0016127|sterol catabolic process GO:0034434|sterol esterification	GO:0005515|protein binding GO:0016746|transferase activity, transferring acyl groups	GO:0009507|chloroplast
pt2_02743	A	A1S	Potri.001G260800	Potri.001G260800(AS)	POPTR_0001s26810	sp|Q9SV05|CCR35_ARATH	Serine/threonine-protein kinase-like protein At3g51990 OS=Arabidopsis thaliana GN=At3g51990 PE=2 SV=1	AT3G51990.1	| Symbols: | Protein kinase superfamily protein | chr3:19287989-19289077 FORWARD LENGTH=362	LOC_Os05g32170.1	protein|TKL_IRAK_CR4L.5 - The CR4L subfamily has homology with Crinkly4, expressed	IMGA|contig_241346_1.1	Receptor-like protein kinase contig_241346 2414-682 E PREDN 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005576|extracellular region
pt2_02744	A	A2S	Potri.001G260900	Potri.001G260900(AS) Potri.009G055400(DS)	POPTR_0001s26820	sp|Q55CT5|SEC31_DICDI	Protein transport protein SEC31 OS=Dictyostelium discoideum GN=sec31 PE=3 SV=1	AT3G63460.1	| Symbols: | transducin family protein / WD-40 repeat family protein | chr3:23431009-23437241 REVERSE LENGTH=1104	LOC_Os07g46370.1	protein|WD domain, G-beta repeat domain containing protein, expressed	IMGA|contig_57879_1.1	Transport protein SEC31 contig_57879 439-1650 E PREDN 20111014	GO:0006007|glucose catabolic process GO:0006499|N-terminal protein myristoylation	GO:0003674|molecular_function	GO:0005737|cytoplasm GO:0005829|cytosol GO:0009506|plasmodesma GO:0016020|membrane GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_02745	A	A1S	Potri.001G261000	Potri.001G261000(AS)	POPTR_0001s26830	sp|A5PK19|MET13_BOVIN	Methyltransferase-like protein 13 OS=Bos taurus GN=METTL13 PE=2 SV=1	AT3G60910.1	| Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr3:22501727-22503182 FORWARD LENGTH=252	LOC_Os07g46340.1	protein|methyltransferase, putative, expressed	NA	NA	GO:0008152|metabolic process	GO:0003824|catalytic activity GO:0008168|methyltransferase activity	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_02746	G	G1	NA	NA	POPTR_0001s26840	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02747	A	A1S	Potri.001G261100	Potri.001G261100(AS)	POPTR_0001s26850	sp|Q0WRX3|SCP40_ARATH	Serine carboxypeptidase-like 40 OS=Arabidopsis thaliana GN=SCPL40 PE=2 SV=2	AT3G63470.1	| Symbols: scpl40 | serine carboxypeptidase-like 40 | chr3:23438561-23440862 FORWARD LENGTH=502	LOC_Os07g46350.1	protein|OsSCP40 - Putative Serine Carboxypeptidase homologue, expressed	IMGA|Medtr1g100600.1	Serine carboxypeptidase II-3 chr1 29361758-29358915 H EGN_Mt100125 20111014	GO:0006508|proteolysis	GO:0004185|serine-type carboxypeptidase activity	GO:0005576|extracellular region
pt2_02748	A	A1S	Potri.001G261200	Potri.001G261200(AS)	POPTR_0001s26860	sp|Q0WRX3|SCP40_ARATH	Serine carboxypeptidase-like 40 OS=Arabidopsis thaliana GN=SCPL40 PE=2 SV=2	AT3G63470.1	| Symbols: scpl40 | serine carboxypeptidase-like 40 | chr3:23438561-23440862 FORWARD LENGTH=502	LOC_Os07g46350.1	protein|OsSCP40 - Putative Serine Carboxypeptidase homologue, expressed	IMGA|Medtr1g100600.1	Serine carboxypeptidase II-3 chr1 29361758-29358915 H EGN_Mt100125 20111014	GO:0006508|proteolysis	GO:0004185|serine-type carboxypeptidase activity	GO:0005576|extracellular region
pt2_02749	A	A1A	Potri.001G261300	Potri.001G261300(AA)	POPTR_0001s26870	sp|Q9LRR4|R13L1_ARATH	Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana GN=RPPL1 PE=2 SV=1	AT3G14470.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr3:4857940-4861104 FORWARD LENGTH=1054	LOC_Os05g41290.1	protein|disease resistance RPP13-like protein 1, putative, expressed	IMGA|Medtr5g095910.1	NB-LRR type disease resistance protein Rps1-k-2 chr5 40893619-40897389 H EGN_Mt100125 20111014	GO:0006952|defense response	GO:0043531|ADP binding	GO:0005634|nucleus
pt2_02750	A	A1A	Potri.001G261300	Potri.001G261300(AA)	POPTR_0001s26880	sp|Q9LRR4|R13L1_ARATH	Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana GN=RPPL1 PE=2 SV=1	AT3G14470.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr3:4857940-4861104 FORWARD LENGTH=1054	LOC_Os05g41290.1	protein|disease resistance RPP13-like protein 1, putative, expressed	IMGA|Medtr5g095910.1	NB-LRR type disease resistance protein Rps1-k-2 chr5 40893619-40897389 H EGN_Mt100125 20111014	GO:0006952|defense response	GO:0043531|ADP binding	GO:0005634|nucleus
pt2_02751	C	C1A	Potri.001G261500	Potri.001G261500(CA)	sp|Q9LRR4|R13L1_ARATH	Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana GN=RPPL1 PE=2 SV=1	AT3G14470.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr3:4857940-4861104 FORWARD LENGTH=1054	LOC_Os05g41290.1	protein|disease resistance RPP13-like protein 1, putative, expressed	IMGA|Medtr5g095910.1	NB-LRR type disease resistance protein Rps1-k-2 chr5 40893619-40897389 H EGN_Mt100125 20111014	GO:0006952|defense response GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process	GO:0005515|protein binding GO:0043531|ADP binding	GO:0005576|extracellular region
pt2_02752	A	A1S	Potri.001G261600	Potri.001G261600(AS)	POPTR_0001s26900	sp|Q9LRR4|R13L1_ARATH	Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana GN=RPPL1 PE=2 SV=1	AT3G14470.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr3:4857940-4861104 FORWARD LENGTH=1054	LOC_Os05g41290.1	protein|disease resistance RPP13-like protein 1, putative, expressed	IMGA|Medtr5g095910.1	NB-LRR type disease resistance protein Rps1-k-2 chr5 40893619-40897389 H EGN_Mt100125 20111014	GO:0006952|defense response GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process	GO:0005515|protein binding GO:0043531|ADP binding	GO:0005576|extracellular region
pt2_02753	A	A1S	Potri.001G261700	Potri.001G261700(AS)	POPTR_0001s26910	NA	NA	AT5G28040.1	| Symbols: | DNA-binding storekeeper protein-related transcriptional regulator | chr5:10037654-10038937 REVERSE LENGTH=427	LOC_Os07g44200.1	protein|transcription regulator, putative, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent	NA	GO:0005634|nucleus
pt2_02754	A	A1S	Potri.001G261800	Potri.001G261800(AS)	POPTR_0001s26920	sp|Q3UX61|NAA11_MOUSE	N-alpha-acetyltransferase 11 OS=Mus musculus GN=Naa11 PE=2 SV=1	AT5G13780.1	| Symbols: | Acyl-CoA N-acyltransferases (NAT) superfamily protein | chr5:4447610-4448603 REVERSE LENGTH=192	LOC_Os04g54330.2	protein|acetyltransferase, GNAT family, putative, expressed	NA	NA	GO:0008152|metabolic process GO:0010228|vegetative to reproductive phase transition of meristem GO:0051604|protein maturation	GO:0008080|N-acetyltransferase activity	GO:0005737|cytoplasm
pt2_02755	A	A1S	Potri.001G261900	Potri.001G261900(AS)	POPTR_0001s26930	sp|Q869R1|CTLHB_DICDI	CTL-like protein DDB_G0274487 OS=Dictyostelium discoideum GN=DDB_G0274487 PE=3 SV=1	AT5G13760.1	| Symbols: | Plasma-membrane choline transporter family protein | chr5:4442102-4444565 FORWARD LENGTH=569	LOC_Os07g46240.1	protein|choline transporter-related, putative, expressed	IMGA|Medtr5g054780.1	Choline transporter-like protein 5-A chr5 22030135-22035055 H EGN_Mt100125 20111014	GO:0019344|cysteine biosynthetic process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005886|plasma membrane
pt2_02756	A	A1S	Potri.001G262000	Potri.001G262000(AS)	POPTR_0001s26940	NA	NA	AT3G52040.1	| Symbols: | unknown protein; Has 37 Blast hits to 37 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:19304368-19304802 REVERSE LENGTH=90	LOC_Os01g16550.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_02757	A	A2S	Potri.001G262100	Potri.001G262100(AS) Potri.009G056900(BS)	POPTR_0001s26950	sp|Q08069|RS8_MAIZE	40S ribosomal protein S8 OS=Zea mays GN=RPS8 PE=2 SV=2	AT5G59240.1	| Symbols: | Ribosomal protein S8e family protein | chr5:23902626-23903670 REVERSE LENGTH=210	LOC_Os04g28180.1	protein|ribosomal protein, putative, expressed	NA	NA	GO:0000462|maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0006412|translation GO:0006414|translational elongation GO:0009165|nucleotide biosynthetic process GO:0042991|transcription factor import into nucleus	GO:0003735|structural constituent of ribosome	GO:0005737|cytoplasm GO:0005840|ribosome GO:0016020|membrane GO:0022626|cytosolic ribosome GO:0022627|cytosolic small ribosomal subunit
pt2_02758	A	A1S	Potri.001G262200	Potri.001G262200(AS)	POPTR_0001s26960	NA	NA	AT5G12470.1	| Symbols: | Protein of unknown function (DUF3411) | chr5:4044950-4047290 REVERSE LENGTH=386	LOC_Os05g32230.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009536|plastid GO:0009706|chloroplast inner membrane GO:0009941|chloroplast envelope
pt2_02759	A	A1S	Potri.001G262400	Potri.001G262400(AS)	POPTR_0001s26970	sp|Q9LY66|RK1_ARATH	50S ribosomal protein L1, chloroplastic OS=Arabidopsis thaliana GN=RPL1 PE=1 SV=1	AT3G63490.1	| Symbols: | Ribosomal protein L1p/L10e family | chr3:23444269-23446020 FORWARD LENGTH=346	LOC_Os05g32220.1	protein|L1P family of ribosomal proteins domain containing protein, expressed	NA	NA	GO:0006098|pentose-phosphate shunt GO:0006354|DNA-dependent transcription, elongation GO:0006412|translation GO:0009073|aromatic amino acid family biosynthetic process GO:0009902|chloroplast relocation GO:0010027|thylakoid membrane organization GO:0015979|photosynthesis GO:0016226|iron-sulfur cluster assembly GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0034660|ncRNA metabolic process GO:0042793|transcription from plastid promoter GO:0045036|protein targeting to chloroplast	GO:0003723|RNA binding GO:0003735|structural constituent of ribosome	GO:0005634|nucleus GO:0005840|ribosome GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope GO:0016020|membrane
pt2_02760	A	A1S	Potri.001G262600	Potri.001G262600(AS)	POPTR_0001s26980	sp|Q8CG46|SMC5_MOUSE	Structural maintenance of chromosomes protein 5 OS=Mus musculus GN=Smc5 PE=2 SV=1	AT5G15920.1	| Symbols: SMC5 | structural maintenance of chromosomes 5 | chr5:5196210-5199559 FORWARD LENGTH=1053	LOC_Os05g51790.1	protein|RecF/RecN/SMC N terminal domain containing protein, expressed	IMGA|Medtr5g036370.1	Structural maintenance of chromosomes protein chr5 15424066-15414400 H EGN_Mt100125 20111014	GO:0007062|sister chromatid cohesion GO:0010267|production of ta-siRNAs involved in RNA interference GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0051607|defense response to virus	GO:0005524|ATP binding	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_02761	B	B1S	Potri.001G262600	Potri.001G262600(BS)	POPTR_0001s26980	sp|Q8CG46|SMC5_MOUSE	Structural maintenance of chromosomes protein 5 OS=Mus musculus GN=Smc5 PE=2 SV=1	AT5G15920.1	| Symbols: SMC5 | structural maintenance of chromosomes 5 | chr5:5196210-5199559 FORWARD LENGTH=1053	LOC_Os05g51790.1	protein|RecF/RecN/SMC N terminal domain containing protein, expressed	IMGA|Medtr5g036370.1	Structural maintenance of chromosomes protein chr5 15424066-15414400 H EGN_Mt100125 20111014	GO:0007062|sister chromatid cohesion GO:0010267|production of ta-siRNAs involved in RNA interference GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0051607|defense response to virus	GO:0005524|ATP binding	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_02762	A	A1S	Potri.001G262600	Potri.001G262600(AS)	POPTR_0001s26980	sp|Q8CG46|SMC5_MOUSE	Structural maintenance of chromosomes protein 5 OS=Mus musculus GN=Smc5 PE=2 SV=1	AT5G15920.1	| Symbols: SMC5 | structural maintenance of chromosomes 5 | chr5:5196210-5199559 FORWARD LENGTH=1053	LOC_Os05g51790.1	protein|RecF/RecN/SMC N terminal domain containing protein, expressed	IMGA|Medtr5g036370.1	Structural maintenance of chromosomes protein chr5 15424066-15414400 H EGN_Mt100125 20111014	GO:0007062|sister chromatid cohesion GO:0010267|production of ta-siRNAs involved in RNA interference GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0051607|defense response to virus	GO:0005524|ATP binding	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_02763	A	A1S	Potri.001G262700	Potri.001G262700(AS)	POPTR_0001s26990	NA	NA	NA	NA	LOC_Os06g04840.1	protein|leucine rich repeat protein, putative, expressed	IMGA|AC202349_3.1	Receptor protein kinase-like protein AC202349.13 6348-8596 H EGN_Mt100125 20111014	GO:0006952|defense response GO:0007165|signal transduction GO:0050832|defense response to fungus	NA	GO:0005618|cell wall
pt2_02764	A	A1S	Potri.001G262800	Potri.001G262800(AS)	POPTR_0001s27000	sp|Q9LYN8|EXS_ARATH	Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1	AT2G34930.1	| Symbols: | disease resistance family protein / LRR family protein | chr2:14737169-14739886 REVERSE LENGTH=905	LOC_Os08g42840.1	protein|leucine rich repeat protein, putative, expressed	IMGA|Medtr5g069580.1	Receptor protein kinase-like protein chr5 28520745-28517219 H EGN_Mt100125 20111014	GO:0006952|defense response GO:0007165|signal transduction GO:0050832|defense response to fungus	NA	GO:0005618|cell wall
pt2_02765	A	A1S	Potri.001G262900	Potri.001G262900(AS)	POPTR_0001s27010	sp|Q9SU30|CPR30_ARATH	F-box protein CPR30 OS=Arabidopsis thaliana GN=CPR30 PE=1 SV=2	AT4G12560.2	| Symbols: CPR30 | F-box and associated interaction domains-containing protein | chr4:7441815-7443157 FORWARD LENGTH=413	LOC_Os09g27660.3	protein|OsFBO21 - F-box and other domain containing protein, expressed	IMGA|Medtr5g057690.1	F-box/kelch-repeat protein chr5 23148635-23147430 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_02766	A	A1S	Potri.001G263000	Potri.001G263000(AS)	POPTR_0001s27020	sp|P69322|UBIQP_PEA	Polyubiquitin OS=Pisum sativum GN=PU1 PE=2 SV=2	AT4G05320.6	| Symbols: UBQ10 | polyubiquitin 10 | chr4:2718559-2719932 FORWARD LENGTH=381	LOC_Os05g42424.1	protein|ubiquitin family protein, putative, expressed	IMGA|Medtr5g092700.1	Bi-ubiquitin chr5 39454527-39453230 F EGN_Mt100125 20111014	GO:0006464|cellular protein modification process GO:0007568|aging GO:0009751|response to salicylic acid stimulus	NA	NA
pt2_02767	A	A1S	Potri.001G263100	Potri.001G263100(AS)	POPTR_0001s27030	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02768	A	A1S	Potri.001G263200	Potri.001G263200(AS)	POPTR_0001s27040	sp|Q941F1|PLA15_ARATH	Phospholipase A1-Igamma1, chloroplastic OS=Arabidopsis thaliana GN=At1g06800 PE=1 SV=2	AT1G30370.1	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr1:10719169-10720758 REVERSE LENGTH=529	LOC_Os05g32380.1	protein|phospholipase, putative, expressed	IMGA|contig_239396_1.1	Lipase family protein contig_239396 2101-830 H PREDN 20111014	GO:0006629|lipid metabolic process GO:0010214|seed coat development	GO:0004806|triglyceride lipase activity GO:0008970|phosphatidylcholine 1-acylhydrolase activity	GO:0005739|mitochondrion
pt2_02769	A	A1S	Potri.001G263300	Potri.001G263300(AS)	POPTR_0001s27050	sp|Q9FLX9|NLE1_ARATH	Notchless protein homolog OS=Arabidopsis thaliana GN=NLE1 PE=2 SV=1	AT5G52820.1	| Symbols: | WD-40 repeat family protein / notchless protein, putative | chr5:21401423-21404203 FORWARD LENGTH=473	LOC_Os10g01540.2	protein|notchless protein, putative, expressed	IMGA|contig_61922_1.1	WD repeat protein contig_61922 3963-60 F PREDN 20111014	GO:0051604|protein maturation	GO:0000166|nucleotide binding	GO:0005634|nucleus GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_02770	A	A1S	Potri.001G263400	Potri.001G263400(AS)	POPTR_0001s27060	sp|Q9FNA2|PAO1_ARATH	Polyamine oxidase 1 OS=Arabidopsis thaliana GN=PAO1 PE=1 SV=1	AT5G13700.1	| Symbols: ATPAO1, APAO, PAO1 | polyamine oxidase 1 | chr5:4420222-4422974 REVERSE LENGTH=472	LOC_Os09g20284.1	protein|amine oxidase, flavin-containing, domain containing protein, expressed	IMGA|Medtr5g090300.1	Polyamine oxidase chr5 38284608-38279612 F EGN_Mt100125 20111014	GO:0006598|polyamine catabolic process GO:0055114|oxidation-reduction process	GO:0046592|polyamine oxidase activity GO:0050660|flavin adenine dinucleotide binding	GO:0005739|mitochondrion
pt2_02771	A	A1S	Potri.001G263500	Potri.001G263500(AS)	POPTR_0001s27070	sp|Q9SCP4|PP279_ARATH	Pentatricopeptide repeat-containing protein At3g53170 OS=Arabidopsis thaliana GN=At3g53170 PE=2 SV=1	AT3G53170.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:19704600-19706417 REVERSE LENGTH=499	LOC_Os03g02430.1	protein|PPR repeat domain containing protein, putative, expressed	IMGA|Medtr5g090210.1	Pentatricopeptide repeat-containing protein chr5 38260030-38262180 E EGN_Mt100125 20111014	GO:0006542|glutamine biosynthetic process GO:0016556|mRNA modification	GO:0003674|molecular_function	GO:0005730|nucleolus GO:0005739|mitochondrion
pt2_02772	A	A1S	Potri.001G263600	Potri.001G263600(AS)	POPTR_0001s27080	NA	NA	AT3G57450.1	| Symbols: | unknown protein; Has 65 Blast hits to 65 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:21262028-21262318 FORWARD LENGTH=96	NA	NA	NA	NA	GO:0008150|biological_process GO:0009611|response to wounding GO:0009620|response to fungus GO:0009695|jasmonic acid biosynthetic process GO:0009738|abscisic acid mediated signaling pathway GO:0009753|response to jasmonic acid stimulus GO:0010200|response to chitin GO:0030968|endoplasmic reticulum unfolded protein response GO:0035556|intracellular signal transduction	GO:0003674|molecular_function	NA
pt2_02773	A	A1S	Potri.001G263700	Potri.001G263700(AS)	POPTR_0001s27090	sp|Q9LM02|SMT1_ARATH	Cycloartenol-C-24-methyltransferase OS=Arabidopsis thaliana GN=SMT1 PE=2 SV=1	AT5G13710.2	| Symbols: SMT1, CPH | sterol methyltransferase 1 | chr5:4424048-4426866 REVERSE LENGTH=336	LOC_Os07g10600.2	protein|cycloartenol-C-24-methyltransferase 1, putative, expressed	NA	NA	GO:0006084|acetyl-CoA metabolic process GO:0006598|polyamine catabolic process GO:0006694|steroid biosynthetic process GO:0008152|metabolic process GO:0009611|response to wounding GO:0009698|phenylpropanoid metabolic process GO:0009793|embryo development ending in seed dormancy GO:0009805|coumarin biosynthetic process GO:0016126|sterol biosynthetic process GO:0016132|brassinosteroid biosynthetic process GO:0019745|pentacyclic triterpenoid biosynthetic process GO:0042398|cellular modified amino acid biosynthetic process	GO:0003838|sterol 24-C-methyltransferase activity GO:0008168|methyltransferase activity	GO:0005737|cytoplasm GO:0005773|vacuole GO:0005783|endoplasmic reticulum GO:0009506|plasmodesma
pt2_02774	A	A1S	Potri.001G263800	Potri.001G263800(AS)	POPTR_0001s27100	sp|Q7L1T6|NB5R4_HUMAN	Cytochrome b5 reductase 4 OS=Homo sapiens GN=CYB5R4 PE=1 SV=1	AT5G09680.2	| Symbols: RLF | reduced lateral root formation | chr5:2999362-3000185 REVERSE LENGTH=211	LOC_Os07g12830.3	protein|cytochrome b5-like Heme/Steroid binding domain containing protein, expressed	NA	NA	GO:0010311|lateral root formation	GO:0020037|heme binding	GO:0005634|nucleus GO:0005829|cytosol
pt2_02775	A	A1S	Potri.001G263900	Potri.001G263900(AS)	POPTR_0001s27110	NA	NA	AT3G08030.1	| Symbols: | Protein of unknown function, DUF642 | chr3:2564191-2565819 FORWARD LENGTH=365	LOC_Os03g59300.1	protein|expressed protein	IMGA|contig_51971_1.1	Unknown protein contig_51971 824-2968 E PREDN 20111014	GO:0008150|biological_process GO:0009740|gibberellic acid mediated signaling pathway GO:0010162|seed dormancy process GO:0015995|chlorophyll biosynthetic process	GO:0003674|molecular_function	GO:0005618|cell wall GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_02776	B	B1S	Potri.001G264000	Potri.001G264000(BS)	POPTR_0001s27120	sp|P30182|TOP2_ARATH	DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2	AT3G23890.2	| Symbols: TOPII, ATTOPII | topoisomerase II | chr3:8624931-8631106 FORWARD LENGTH=1438	LOC_Os02g47150.1	protein|DNA topoisomerase 2, putative, expressed	NA	NA	GO:0000226|microtubule cytoskeleton organization GO:0000712|resolution of meiotic recombination intermediates GO:0000819|sister chromatid segregation GO:0006200|ATP catabolic process GO:0006259|DNA metabolic process GO:0006260|DNA replication GO:0006261|DNA-dependent DNA replication GO:0006265|DNA topological change GO:0006270|DNA replication initiation GO:0006275|regulation of DNA replication GO:0006306|DNA methylation GO:0006312|mitotic recombination GO:0006342|chromatin silencing GO:0008283|cell proliferation GO:0009909|regulation of flower development GO:0009957|epidermal cell fate specification GO:0010583|response to cyclopentenone GO:0016458|gene silencing GO:0016572|histone phosphorylation GO:0034968|histone lysine methylation GO:0051225|spindle assembly GO:0051567|histone H3-K9 methylation GO:0051726|regulation of cell cycle GO:0070683|mitotic cell cycle G2/M transition decatenation checkpoint	GO:0003677|DNA binding GO:0003916|DNA topoisomerase activity GO:0003918|DNA topoisomerase (ATP-hydrolyzing) activity GO:0005524|ATP binding GO:0008094|DNA-dependent ATPase activity	GO:0000795|synaptonemal complex GO:0005634|nucleus GO:0005694|chromosome GO:0009330|DNA topoisomerase complex (ATP-hydrolyzing) GO:0009507|chloroplast
pt2_02777	A	A1S	Potri.001G264100	Potri.001G264100(AS)	POPTR_0001s27130	sp|Q84TI3|OBE4_ARATH	Protein OBERON 4 OS=Arabidopsis thaliana GN=OBE4 PE=1 SV=2	AT3G63500.1	| Symbols: | Protein of unknown function (DUF1423) | chr3:23446331-23449166 REVERSE LENGTH=887	LOC_Os03g11890.1	protein|potyvirus VPg interacting protein, putative, expressed	IMGA|Medtr5g097360.1	Potyvirus VPg interacting protein chr5 41607135-41610779 F EGN_Mt100125 20111014	GO:0001708|cell fate specification GO:0009880|embryonic pattern specification GO:0090421|embryonic meristem initiation	GO:0005515|protein binding	GO:0005634|nucleus
pt2_02778	A	A1S	Potri.001G264200	Potri.001G264200(AS)	POPTR_0001s27140	NA	NA	NA	NA	LOC_Os10g05700.1	protein|retrotransposon protein, putative, unclassified, expressed	IMGA|Medtr5g061150.1	hypothetical protein chr5 24621334-24620915 H EGN_Mt100125 20111014	NA	NA	NA
pt2_02779	A	A1S	Potri.001G264300	Potri.001G264300(AS)	POPTR_0001s27150	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02780	A	A1S	Potri.001G264400	Potri.001G264400(AS)	POPTR_0001s27160	sp|Q9LDC0|FKB42_ARATH	Peptidyl-prolyl cis-trans isomerase FKBP42 OS=Arabidopsis thaliana GN=FKBP42 PE=1 SV=1	AT3G21640.1	| Symbols: TWD1, UCU2, FKBP42, ATFKBP42 | FKBP-type peptidyl-prolyl cis-trans isomerase family protein | chr3:7619025-7621097 REVERSE LENGTH=365	LOC_Os11g05090.1	protein|peptidyl-prolyl isomerase, putative, expressed	IMGA|Medtr1g017870.1	70 kDa peptidyl-prolyl isomerase chr1 5194150-5200002 E EGN_Mt100125 20111014	GO:0006457|protein folding GO:0018208|peptidyl-proline modification GO:0030244|cellulose biosynthetic process GO:0048193|Golgi vesicle transport GO:0048366|leaf development	GO:0003755|peptidyl-prolyl cis-trans isomerase activity GO:0005515|protein binding GO:0005516|calmodulin binding GO:0005528|FK506 binding	GO:0005886|plasma membrane
pt2_02781	A	A1S	Potri.001G264500	Potri.001G264500(AS)	POPTR_0001s27170	sp|Q9BZE9|ASPC1_HUMAN	Tether containing UBX domain for GLUT4 OS=Homo sapiens GN=ASPSCR1 PE=1 SV=1	AT3G27310.1	| Symbols: PUX1 | plant UBX domain-containing protein 1 | chr3:10087360-10089077 REVERSE LENGTH=251	LOC_Os04g40870.1	protein|alveolar soft part sarcoma chromosome region, candidate 1, putative, expressed	NA	NA	GO:0035265|organ growth GO:0043241|protein complex disassembly	NA	GO:0005634|nucleus
pt2_02782	A	A1S	Potri.001G264600	Potri.001G264600(AS)	POPTR_0001s27180	sp|Q8L709|CHX28_ARATH	Cation/H(+) antiporter 28 OS=Arabidopsis thaliana GN=CHX28 PE=2 SV=2	AT3G52080.1	| Symbols: chx28 | cation/hydrogen exchanger 28 | chr3:19315090-19317735 FORWARD LENGTH=801	LOC_Os12g44300.1	protein|CHX28, putative, expressed	IMGA|Medtr5g009770.1	Na+/H+ antiporter-like protein chr5 2205905-2209473 E EGN_Mt100125 20111014	GO:0006812|cation transport GO:0009827|plant-type cell wall modification GO:0009860|pollen tube growth GO:0055085|transmembrane transport	GO:0005451|monovalent cation:hydrogen antiporter activity GO:0015299|solute:hydrogen antiporter activity	GO:0016020|membrane GO:0016021|integral to membrane
pt2_02783	G	G1	NA	NA	POPTR_0001s27190	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02784	A	A1S	Potri.001G264800	Potri.001G264800(AS)	POPTR_0001s27200	sp|O08550|MLL4_MOUSE	Histone-lysine N-methyltransferase MLL4 OS=Mus musculus GN=Wbp7 PE=1 SV=3	AT3G08020.1	| Symbols: | PHD finger family protein | chr3:2557753-2561534 REVERSE LENGTH=779	LOC_Os12g34330.1	protein|protein binding protein, putative, expressed	NA	NA	NA	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_02785	A	A1S	Potri.001G264900	Potri.001G264900(AS)	POPTR_0001s27210	sp|Q87L85|DUSA_VIBPA	tRNA-dihydrouridine synthase A OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) GN=dusA PE=3 SV=1	AT3G63510.1	| Symbols: | FMN-linked oxidoreductases superfamily protein | chr3:23450542-23452682 FORWARD LENGTH=419	LOC_Os04g20990.1	protein|tRNA-dihydrouridine synthase, putative, expressed	NA	NA	GO:0006808|regulation of nitrogen utilization GO:0008033|tRNA processing GO:0016556|mRNA modification GO:0019243|methylglyoxal catabolic process to D-lactate GO:0055114|oxidation-reduction process	GO:0003824|catalytic activity GO:0017150|tRNA dihydrouridine synthase activity GO:0050660|flavin adenine dinucleotide binding	GO:0009507|chloroplast
pt2_02786	A	A1S	Potri.001G265000	Potri.001G265000(AS)	POPTR_0001s27220	NA	NA	NA	NA	NA	NA	NA	NA	GO:0009611|response to wounding GO:0010193|response to ozone GO:0010224|response to UV-B	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009543|chloroplast thylakoid lumen GO:0030095|chloroplast photosystem II
pt2_02787	A	A1S	Potri.001G265100	Potri.001G265100(AS)	POPTR_0001s27230	NA	NA	AT5G47940.1	| Symbols: | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:19409407-19411893 REVERSE LENGTH=749	LOC_Os07g38160.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02788	A	A1S	Potri.001G265200	Potri.001G265200(AS)	POPTR_0001s27240	sp|Q8L4Y5|ARP7_ARATH	Actin-related protein 7 OS=Arabidopsis thaliana GN=ARP7 PE=1 SV=1	AT3G60830.1	| Symbols: ATARP7, ARP7 | actin-related protein 7 | chr3:22474298-22476000 FORWARD LENGTH=363	LOC_Os03g56970.1	protein|actin, putative, expressed	IMGA|Medtr5g066400.1	Actin-related protein chr5 27024745-27037702 F EGN_Mt100125 20111014	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0006325|chromatin organization GO:0009086|methionine biosynthetic process GO:0009616|virus induced gene silencing GO:0009640|photomorphogenesis GO:0009653|anatomical structure morphogenesis GO:0009737|response to abscisic acid stimulus GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009909|regulation of flower development GO:0009933|meristem structural organization GO:0010050|vegetative phase change GO:0010162|seed dormancy process GO:0010182|sugar mediated signaling pathway GO:0010227|floral organ abscission GO:0010228|vegetative to reproductive phase transition of meristem GO:0010564|regulation of cell cycle process GO:0016567|protein ubiquitination GO:0019915|lipid storage GO:0048366|leaf development GO:0048825|cotyledon development GO:0050826|response to freezing	GO:0005200|structural constituent of cytoskeleton	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_02789	A	A1S	Potri.001G265300	Potri.001G265300(AS)	POPTR_0001s27250	sp|Q8RUN2|LOG1_ARATH	Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 OS=Arabidopsis thaliana GN=LOG1 PE=1 SV=1	AT2G28305.1	| Symbols: LOG1, ATLOG1 | Putative lysine decarboxylase family protein | chr2:12081186-12084307 FORWARD LENGTH=213	LOC_Os04g43840.1	protein|possible lysine decarboxylase domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005829|cytosol
pt2_02790	A	A1S	Potri.001G265300	Potri.001G265300(AS)	POPTR_0001s27250	sp|Q8RUN2|LOG1_ARATH	Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 OS=Arabidopsis thaliana GN=LOG1 PE=1 SV=1	AT2G28305.1	| Symbols: LOG1, ATLOG1 | Putative lysine decarboxylase family protein | chr2:12081186-12084307 FORWARD LENGTH=213	LOC_Os04g43840.1	protein|possible lysine decarboxylase domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005829|cytosol
pt2_02791	C	C2S	Potri.001G265300	Potri.001G265300(CS) Potri.009G060300(CS)	sp|Q8RUN2|LOG1_ARATH	Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 OS=Arabidopsis thaliana GN=LOG1 PE=1 SV=1	AT2G28305.1	| Symbols: LOG1, ATLOG1 | Putative lysine decarboxylase family protein | chr2:12081186-12084307 FORWARD LENGTH=213	LOC_Os04g43840.1	protein|possible lysine decarboxylase domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005829|cytosol
pt2_02792	A	A4S	Potri.001G265400	Potri.001G265400(AS) Potri.009G060500(DS) Potri.001G265600(DS) Potri.001G265900(DS)	POPTR_0001s27260	sp|O65572|CCD1_ARATH	Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Arabidopsis thaliana GN=CCD1 PE=1 SV=2	AT3G63520.1	| Symbols: CCD1, ATCCD1, ATNCED1, NCED1 | carotenoid cleavage dioxygenase 1 | chr3:23452940-23455896 FORWARD LENGTH=538	LOC_Os12g44310.2	protein|carotenoid cleavage dioxygenase, putative, expressed	IMGA|Medtr5g025270.1	50S ribosomal protein L14 chr5 9997336-10001424 E EGN_Mt100125 20111014	GO:0006098|pentose-phosphate shunt GO:0006636|unsaturated fatty acid biosynthetic process GO:0006655|phosphatidylglycerol biosynthetic process GO:0009414|response to water deprivation GO:0010304|PSII associated light-harvesting complex II catabolic process GO:0015995|chlorophyll biosynthetic process GO:0016117|carotenoid biosynthetic process GO:0016118|carotenoid catabolic process GO:0016121|carotene catabolic process GO:0016124|xanthophyll catabolic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0044242|cellular lipid catabolic process	GO:0045549|9-cis-epoxycarotenoid dioxygenase activity	GO:0005737|cytoplasm GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_02793	A	A2S	Potri.001G265600	Potri.001G265600(AS) Potri.001G265900(BS)	POPTR_0001s27270	sp|Q8LP17|CCD1_PEA	Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Pisum sativum GN=CCD1 PE=2 SV=1	AT3G63520.1	| Symbols: CCD1, ATCCD1, ATNCED1, NCED1 | carotenoid cleavage dioxygenase 1 | chr3:23452940-23455896 FORWARD LENGTH=538	LOC_Os12g44310.2	protein|carotenoid cleavage dioxygenase, putative, expressed	IMGA|Medtr5g025270.1	50S ribosomal protein L14 chr5 9997336-10001424 E EGN_Mt100125 20111014	GO:0006098|pentose-phosphate shunt GO:0006636|unsaturated fatty acid biosynthetic process GO:0006655|phosphatidylglycerol biosynthetic process GO:0009414|response to water deprivation GO:0010304|PSII associated light-harvesting complex II catabolic process GO:0015995|chlorophyll biosynthetic process GO:0016117|carotenoid biosynthetic process GO:0016118|carotenoid catabolic process GO:0016121|carotene catabolic process GO:0016124|xanthophyll catabolic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0044242|cellular lipid catabolic process	GO:0045549|9-cis-epoxycarotenoid dioxygenase activity	GO:0005737|cytoplasm GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_02794	A	A4S	Potri.001G265600	Potri.001G265600(AS) Potri.001G265900(AS) Potri.001G265400(DS) Potri.009G060500(DS)	POPTR_0001s27290	sp|Q8LP17|CCD1_PEA	Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Pisum sativum GN=CCD1 PE=2 SV=1	AT3G63520.1	| Symbols: CCD1, ATCCD1, ATNCED1, NCED1 | carotenoid cleavage dioxygenase 1 | chr3:23452940-23455896 FORWARD LENGTH=538	LOC_Os12g44310.2	protein|carotenoid cleavage dioxygenase, putative, expressed	IMGA|Medtr5g025270.1	50S ribosomal protein L14 chr5 9997336-10001424 E EGN_Mt100125 20111014	GO:0006098|pentose-phosphate shunt GO:0006636|unsaturated fatty acid biosynthetic process GO:0006655|phosphatidylglycerol biosynthetic process GO:0009414|response to water deprivation GO:0010304|PSII associated light-harvesting complex II catabolic process GO:0015995|chlorophyll biosynthetic process GO:0016117|carotenoid biosynthetic process GO:0016118|carotenoid catabolic process GO:0016121|carotene catabolic process GO:0016124|xanthophyll catabolic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0044242|cellular lipid catabolic process	GO:0045549|9-cis-epoxycarotenoid dioxygenase activity	GO:0005737|cytoplasm GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_02795	A	A1S	Potri.001G266000	Potri.001G266000(AS)	POPTR_0001s27300	sp|Q9LXV5|NFYA1_ARATH	Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana GN=NFYA1 PE=2 SV=1	AT5G12840.4	| Symbols: HAP2A, ATHAP2A, NF-YA1 | nuclear factor Y, subunit A1 | chr5:4051147-4052961 REVERSE LENGTH=271	LOC_Os03g48970.2	protein|nuclear transcription factor Y subunit, putative, expressed	IMGA|Medtr1g056530.1	Nuclear transcription factor Y subunit A-10 chr1 14860365-14857641 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009555|pollen development GO:0009790|embryo development GO:0009793|embryo development ending in seed dormancy GO:0010262|somatic embryogenesis GO:0045892|negative regulation of transcription, DNA-dependent GO:0045893|positive regulation of transcription, DNA-dependent GO:0048316|seed development GO:0048510|regulation of timing of transition from vegetative to reproductive phase GO:0055046|microgametogenesis	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus GO:0016602|CCAAT-binding factor complex
pt2_02796	A	A1S	Potri.001G266200	Potri.001G266200(AS)	POPTR_0001s27310	sp|Q70Z53|F10C1_HUMAN	Protein FRA10AC1 OS=Homo sapiens GN=FRA10AC1 PE=1 SV=3	AT4G15030.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Folate-sensitive fragile site protein Fra10Ac1 (InterPro:IPR019129); Has 8455 Blast hits to 5700 proteins in 376 species: Archae - 6; Bacteria - 264; Metazoa - 3820; Fungi - 744; Plants - 645; Viruses - 76; Other Eukaryotes - 2900 (source: NCBI BLink). | chr4:8578989-8581180 FORWARD LENGTH=278	LOC_Os11g42000.1	protein|FRA10AC1, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_02797	A	A1S	Potri.001G266400	Potri.001G266400(AS)	POPTR_0001s27320	sp|Q941L0|CESA3_ARATH	Cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Arabidopsis thaliana GN=CESA3 PE=1 SV=2	AT5G05170.1	| Symbols: CESA3, IXR1, ATCESA3, ATH-B, CEV1 | Cellulose synthase family protein | chr5:1530401-1535090 REVERSE LENGTH=1065	LOC_Os07g10770.1	protein|CESA8 - cellulose synthase, expressed	IMGA|contig_10763_1.1	Cellulose synthase contig_10763 678-4315 H PREDN 20111014	GO:0000271|polysaccharide biosynthetic process GO:0006096|glycolysis GO:0006816|calcium ion transport GO:0006833|water transport GO:0006952|defense response GO:0006972|hyperosmotic response GO:0007030|Golgi organization GO:0007389|pattern specification process GO:0008361|regulation of cell size GO:0009266|response to temperature stimulus GO:0009651|response to salt stress GO:0009750|response to fructose stimulus GO:0009809|lignin biosynthetic process GO:0009825|multidimensional cell growth GO:0009926|auxin polar transport GO:0009932|cell tip growth GO:0010015|root morphogenesis GO:0010817|regulation of hormone levels GO:0016049|cell growth GO:0016126|sterol biosynthetic process GO:0030243|cellulose metabolic process GO:0030244|cellulose biosynthetic process GO:0040007|growth GO:0043255|regulation of carbohydrate biosynthetic process GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0046686|response to cadmium ion GO:0048767|root hair elongation GO:0071555|cell wall organization	GO:0008270|zinc ion binding GO:0016757|transferase activity, transferring glycosyl groups GO:0016759|cellulose synthase activity GO:0016760|cellulose synthase (UDP-forming) activity	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane
pt2_02798	A	A2S	Potri.001G266400	Potri.001G266400(AS) Potri.009G060800(BS)	POPTR_0001s27320	sp|Q941L0|CESA3_ARATH	Cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Arabidopsis thaliana GN=CESA3 PE=1 SV=2	AT5G05170.1	| Symbols: CESA3, IXR1, ATCESA3, ATH-B, CEV1 | Cellulose synthase family protein | chr5:1530401-1535090 REVERSE LENGTH=1065	LOC_Os07g10770.1	protein|CESA8 - cellulose synthase, expressed	IMGA|contig_10763_1.1	Cellulose synthase contig_10763 678-4315 H PREDN 20111014	GO:0000271|polysaccharide biosynthetic process GO:0006096|glycolysis GO:0006816|calcium ion transport GO:0006833|water transport GO:0006952|defense response GO:0006972|hyperosmotic response GO:0007030|Golgi organization GO:0007389|pattern specification process GO:0008361|regulation of cell size GO:0009266|response to temperature stimulus GO:0009651|response to salt stress GO:0009750|response to fructose stimulus GO:0009809|lignin biosynthetic process GO:0009825|multidimensional cell growth GO:0009926|auxin polar transport GO:0009932|cell tip growth GO:0010015|root morphogenesis GO:0010817|regulation of hormone levels GO:0016049|cell growth GO:0016126|sterol biosynthetic process GO:0030243|cellulose metabolic process GO:0030244|cellulose biosynthetic process GO:0040007|growth GO:0043255|regulation of carbohydrate biosynthetic process GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0046686|response to cadmium ion GO:0048767|root hair elongation GO:0071555|cell wall organization	GO:0008270|zinc ion binding GO:0016757|transferase activity, transferring glycosyl groups GO:0016759|cellulose synthase activity GO:0016760|cellulose synthase (UDP-forming) activity	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane
pt2_02799	C	C1S	Potri.001G266400	Potri.001G266400(CS)	sp|Q941L0|CESA3_ARATH	Cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Arabidopsis thaliana GN=CESA3 PE=1 SV=2	AT5G05170.1	| Symbols: CESA3, IXR1, ATCESA3, ATH-B, CEV1 | Cellulose synthase family protein | chr5:1530401-1535090 REVERSE LENGTH=1065	LOC_Os07g10770.1	protein|CESA8 - cellulose synthase, expressed	IMGA|contig_10763_1.1	Cellulose synthase contig_10763 678-4315 H PREDN 20111014	GO:0000271|polysaccharide biosynthetic process GO:0006096|glycolysis GO:0006816|calcium ion transport GO:0006833|water transport GO:0006952|defense response GO:0006972|hyperosmotic response GO:0007030|Golgi organization GO:0007389|pattern specification process GO:0008361|regulation of cell size GO:0009266|response to temperature stimulus GO:0009651|response to salt stress GO:0009750|response to fructose stimulus GO:0009809|lignin biosynthetic process GO:0009825|multidimensional cell growth GO:0009926|auxin polar transport GO:0009932|cell tip growth GO:0010015|root morphogenesis GO:0010817|regulation of hormone levels GO:0016049|cell growth GO:0016126|sterol biosynthetic process GO:0030243|cellulose metabolic process GO:0030244|cellulose biosynthetic process GO:0040007|growth GO:0043255|regulation of carbohydrate biosynthetic process GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0046686|response to cadmium ion GO:0048767|root hair elongation GO:0071555|cell wall organization	GO:0008270|zinc ion binding GO:0016757|transferase activity, transferring glycosyl groups GO:0016759|cellulose synthase activity GO:0016760|cellulose synthase (UDP-forming) activity	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane
pt2_02800	A	A1S	Potri.001G266500	Potri.001G266500(AS)	POPTR_0001s27330	NA	NA	AT1G07985.1	| Symbols: | Expressed protein | chr1:2475508-2475942 FORWARD LENGTH=144	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_02801	G	G4	NA	NA	POPTR_0001s27340	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02802	A	A1S	Potri.001G266600	Potri.001G266600(AS)	POPTR_0001s27360	NA	NA	NA	NA	LOC_Os07g07600.1	protein|transposon protein, putative, unclassified, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02803	A	A1S	Potri.001G266700	Potri.001G266700(AS)	POPTR_0001s27370	sp|P93755|C3H30_ARATH	Zinc finger CCCH domain-containing protein 30 OS=Arabidopsis thaliana GN=At2g41900 PE=1 SV=2	AT2G41900.1	| Symbols: | CCCH-type zinc finger protein with ARM repeat domain | chr2:17491352-17493502 FORWARD LENGTH=716	LOC_Os03g49170.3	protein|zinc finger family protein, putative, expressed	IMGA|Medtr5g082830.1	Zinc finger CCCH domain-containing protein chr5 34631506-34633512 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006486|protein glycosylation	GO:0003676|nucleic acid binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_02804	A	A1S	Potri.001G266800	Potri.001G266800(AS)	POPTR_0001s27380	NA	NA	NA	NA	LOC_Os04g23360.1	protein|retrotransposon protein, putative, unclassified, expressed	IMGA|Medtr5g032840.1	Helicase-like protein chr5 13739656-13738319 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02805	A	A1S	Potri.001G266900	Potri.001G266900(AS)	POPTR_0001s27390	sp|Q9SFB0|FRD3_ARATH	MATE efflux family protein FRD3 OS=Arabidopsis thaliana GN=FRD3 PE=1 SV=1	AT3G08040.2	| Symbols: FRD3, MAN1, ATFRD3 | MATE efflux family protein | chr3:2566593-2569397 REVERSE LENGTH=526	LOC_Os03g11734.2	protein|MATE efflux protein, putative, expressed	IMGA|Medtr5g099020.2	"Transporter, putative" chr5 42332540-42338402 F EGN_Mt100125 20111014	GO:0006826|iron ion transport GO:0006855|drug transmembrane transport GO:0006879|cellular iron ion homeostasis GO:0010106|cellular response to iron ion starvation GO:0010167|response to nitrate GO:0010413|glucuronoxylan metabolic process GO:0015706|nitrate transport GO:0045492|xylan biosynthetic process GO:0055085|transmembrane transport GO:0071281|cellular response to iron ion GO:0071369|cellular response to ethylene stimulus GO:0071732|cellular response to nitric oxide	GO:0005215|transporter activity GO:0015137|citrate transmembrane transporter activity GO:0015238|drug transmembrane transporter activity GO:0015297|antiporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_02806	A	A1S	Potri.001G267000	Potri.001G267000(AS)	POPTR_0001s27400	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02807	A	A3S	Potri.001G267100	Potri.001G267100(AS) Potri.006G112300(BS) Potri.001G354400(BS)	POPTR_0001s27410	sp|Q9FHF9|PP419_ARATH	Pentatricopeptide repeat-containing protein At5g46460, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H49 PE=2 SV=1	AT5G46460.1	| Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr5:18840305-18842398 FORWARD LENGTH=697	LOC_Os03g13230.1	protein|pentatricopeptide, putative, expressed	IMGA|Medtr1g073300.1	Pentatricopeptide repeat-containing protein chr1 18648764-18651151 H EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005739|mitochondrion
pt2_02808	A	A1S	Potri.001G267200	Potri.001G267200(AS)	POPTR_0001s27420	NA	NA	AT3G08490.1	| Symbols: | BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant protein, group 2 (TAIR:AT3G24600.1); Has 161 Blast hits to 158 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 161; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:2574105-2575125 REVERSE LENGTH=271	LOC_Os03g11710.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02809	A	A1S	Potri.001G267200	Potri.001G267200(AS)	POPTR_0001s27420	NA	NA	AT3G08490.1	| Symbols: | BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant protein, group 2 (TAIR:AT3G24600.1); Has 161 Blast hits to 158 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 161; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:2574105-2575125 REVERSE LENGTH=271	LOC_Os03g11710.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02810	A	A1S	Potri.001G267300	Potri.001G267300(AS)	POPTR_0001s27430	sp|Q9LXV2|MYB46_ARATH	Transcription factor MYB46 OS=Arabidopsis thaliana GN=MYB46 PE=2 SV=1	AT3G08500.1	| Symbols: MYB83, AtMYB83 | myb domain protein 83 | chr3:2576958-2578072 REVERSE LENGTH=343	LOC_Os12g33070.1	protein|myb-like DNA-binding domain containing protein, putative, expressed	IMGA|Medtr5g010020.2	40S ribosomal protein S10-like protein chr5 2353539-2367303 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0045893|positive regulation of transcription, DNA-dependent GO:2000652|regulation of secondary cell wall biogenesis	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_02811	A	A1S	Potri.001G267400	Potri.001G267400(AS)	POPTR_0001s27440	sp|Q9SZ30|HIS5_ARATH	Imidazole glycerol phosphate synthase hisHF, chloroplastic OS=Arabidopsis thaliana GN=At4g26900 PE=1 SV=1	AT4G26900.1	| Symbols: AT-HF, HISN4 | HIS HF | chr4:13515514-13519608 FORWARD LENGTH=592	LOC_Os03g15120.1	protein|imidazole glycerol phosphate synthase hisHF, chloroplast precursor, putative, expressed	NA	NA	GO:0000105|histidine biosynthetic process GO:0008152|metabolic process GO:0009220|pyrimidine ribonucleotide biosynthetic process	GO:0000107|imidazoleglycerol-phosphate synthase activity GO:0003824|catalytic activity GO:0016763|transferase activity, transferring pentosyl groups GO:0016833|oxo-acid-lyase activity	GO:0005737|cytoplasm GO:0009507|chloroplast GO:0009536|plastid GO:0009570|chloroplast stroma
pt2_02812	C	C1S	Potri.001G267500	Potri.001G267500(CS)	NA	NA	AT3G52105.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr3:19323394-19323606 FORWARD LENGTH=70	NA	NA	NA	NA	GO:0006661|phosphatidylinositol biosynthetic process GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_02813	A	A1S	Potri.001G267600	Potri.001G267600(AS)	POPTR_0001s27460	NA	NA	AT3G52110.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages. | chr3:19323925-19325632 REVERSE LENGTH=334	LOC_Os03g07810.1	protein|expressed protein	NA	NA	GO:0000226|microtubule cytoskeleton organization GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_02814	A	A1S	Potri.001G267700	Potri.001G267700(AS)	POPTR_0001s27470	sp|Q8L649|BB_ARATH	E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana GN=BB PE=1 SV=1	AT3G63530.2	| Symbols: BB, BB2 | RING/U-box superfamily protein | chr3:23456407-23457787 REVERSE LENGTH=248	LOC_Os03g07790.1	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr1g114240.1	RING finger protein chr1 33086901-33092916 F EGN_Mt100125 20111014	GO:0016567|protein ubiquitination GO:0046621|negative regulation of organ growth GO:0048437|floral organ development GO:0051865|protein autoubiquitination	GO:0004842|ubiquitin-protein ligase activity GO:0008270|zinc ion binding GO:0031624|ubiquitin conjugating enzyme binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02815	A	A1S	Potri.001G267800	Potri.001G267800(AS)	POPTR_0001s27480	sp|O22342|ADT1_GOSHI	ADP,ATP carrier protein 1, mitochondrial OS=Gossypium hirsutum GN=ANT1 PE=2 SV=1	AT3G08580.2	| Symbols: AAC1 | ADP/ATP carrier 1 | chr3:2605706-2607030 REVERSE LENGTH=381	LOC_Os02g48720.2	protein|mitochondrial carrier protein, putative, expressed	IMGA|Medtr1g012030.1	Brittle 1 protein-like protein chr1 2768338-2765042 H EGN_Mt100125 20111014	GO:0006094|gluconeogenesis GO:0006612|protein targeting to membrane GO:0006810|transport GO:0006820|anion transport GO:0006862|nucleotide transport GO:0006865|amino acid transport GO:0006888|ER to Golgi vesicle-mediated transport GO:0006944|cellular membrane fusion GO:0007010|cytoskeleton organization GO:0010363|regulation of plant-type hypersensitive response GO:0010498|proteasomal protein catabolic process GO:0015696|ammonium transport GO:0015802|basic amino acid transport GO:0015865|purine nucleotide transport GO:0043069|negative regulation of programmed cell death GO:0043090|amino acid import GO:0043269|regulation of ion transport GO:0055085|transmembrane transport	GO:0005215|transporter activity GO:0005471|ATP:ADP antiporter activity GO:0005507|copper ion binding GO:0005515|protein binding	GO:0005739|mitochondrion GO:0005740|mitochondrial envelope GO:0005743|mitochondrial inner membrane GO:0005774|vacuolar membrane GO:0009507|chloroplast GO:0009941|chloroplast envelope GO:0016020|membrane
pt2_02816	A	A1S	Potri.001G267900	Potri.001G267900(AS)	POPTR_0001s27490	sp|Q8VWG3|TT1_ARATH	Protein TRANSPARENT TESTA 1 OS=Arabidopsis thaliana GN=TT1 PE=2 SV=1	AT3G57670.1	| Symbols: NTT, WIP2 | C2H2-type zinc finger family protein | chr3:21370936-21373121 FORWARD LENGTH=383	LOC_Os06g40960.1	protein|ZOS6-05 - C2H2 zinc finger protein, expressed	IMGA|Medtr5g054090.1	Zinc finger-like protein chr5 21755121-21752391 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009827|plant-type cell wall modification GO:0009860|pollen tube growth GO:0010500|transmitting tissue development	GO:0003676|nucleic acid binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_02817	A	A1S	Potri.001G268000	Potri.001G268000(AS)	POPTR_0001s27500	NA	NA	NA	NA	LOC_Os09g31170.1	protein|expressed protein	NA	NA	NA	NA	NA
pt2_02818	A	A1S	Potri.001G268100	Potri.001G268100(AS)	POPTR_0001s27510	sp|P82658|TL19_ARATH	Thylakoid lumenal 19 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=At3g63540 PE=1 SV=2	AT3G63540.1	| Symbols: | Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein | chr3:23459372-23459803 REVERSE LENGTH=143	LOC_Os08g39430.1	protein|thylakoid lumenal 19 kDa protein, chloroplast precursor, putative, expressed	NA	NA	GO:0015979|photosynthesis	GO:0005509|calcium ion binding	GO:0009507|chloroplast GO:0009523|photosystem II GO:0009654|oxygen evolving complex GO:0019898|extrinsic to membrane
pt2_02819	A	A2A	Potri.001G268200	Potri.001G268200(AA) Potri.009G062600(DA)	POPTR_0001s27520	sp|E0X9N4|C3H69_ARATH	Zinc finger CCCH domain-containing protein 69 OS=Arabidopsis thaliana GN=At3g63550 PE=3 SV=1	AT3G08505.1	| Symbols: | zinc finger (CCCH-type/C3HC4-type RING finger) family protein | chr3:2580603-2582043 REVERSE LENGTH=323	LOC_Os06g21390.2	protein|Zinc finger C-x8-C-x5-C-x3-H type domain containing protein, expressed	NA	NA	NA	GO:0003676|nucleic acid binding GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_02820	A	A1S	Potri.001G268400	Potri.001G268400(AS)	POPTR_0001s27530	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02821	A	A1S	Potri.001G268500	Potri.001G268500(AS)	POPTR_0001s27540	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02822	A	A1S	Potri.001G268600	Potri.001G268600(AS)	POPTR_0001s27550	sp|Q9ZRF1|MTDH_FRAAN	Probable mannitol dehydrogenase OS=Fragaria ananassa GN=CAD PE=2 SV=1	AT4G37980.1	| Symbols: ELI3-1, ELI3, ATCAD7, CAD7 | elicitor-activated gene 3-1 | chr4:17852670-17854302 FORWARD LENGTH=357	LOC_Os09g23540.1	protein|dehydrogenase, putative, expressed	IMGA|Medtr5g031310.1	Cinnamyl alcohol dehydrogenase chr5 13001233-12999270 F EGN_Mt100125 20111014	GO:0009617|response to bacterium GO:0009626|plant-type hypersensitive response GO:0009809|lignin biosynthetic process GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0008270|zinc ion binding GO:0016491|oxidoreductase activity GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups GO:0045551|cinnamyl-alcohol dehydrogenase activity	GO:0005737|cytoplasm
pt2_02823	A	A2S	Potri.001G268700	Potri.001G268700(AS) Potri.002G161300(AS)	POPTR_0001s27560	sp|P80728|MAVI_CUCPE	Mavicyanin OS=Cucurbita pepo PE=1 SV=1	AT5G26330.1	| Symbols: | Cupredoxin superfamily protein | chr5:9241614-9242635 REVERSE LENGTH=187	LOC_Os03g59280.1	protein|plastocyanin-like domain containing protein, putative, expressed	IMGA|Medtr5g006040.1	Early nodulin-like protein chr5 502223-501280 F EGN_Mt100125 20111014	GO:0010413|glucuronoxylan metabolic process GO:0044036|cell wall macromolecule metabolic process GO:0045492|xylan biosynthetic process	GO:0005507|copper ion binding GO:0009055|electron carrier activity	GO:0005886|plasma membrane GO:0031225|anchored to membrane
pt2_02824	A	A1S	Potri.001G268900	Potri.001G268900(AS)	POPTR_0001s27570	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02825	A	A1S	Potri.001G269000	Potri.001G269000(AS)	POPTR_0001s27580	NA	NA	AT3G12650.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 31 Blast hits to 31 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:4017881-4018597 REVERSE LENGTH=238	LOC_Os02g48680.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_02826	G	G1	NA	NA	POPTR_0001s27590	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02827	A	A1S	Potri.001G269200	Potri.001G269200(AS)	POPTR_0001s27600	sp|A6NDY0|EPAB2_HUMAN	Embryonic polyadenylate-binding protein 2 OS=Homo sapiens GN=PABPN1L PE=2 SV=1	AT3G12640.1	| Symbols: | RNA binding (RRM/RBD/RNP motifs) family protein | chr3:4014455-4017675 FORWARD LENGTH=638	LOC_Os04g39629.1	protein|RNA recognition motif containing protein, putative, expressed	IMGA|Medtr1g073000.1	Polyadenylate-binding protein chr1 18456519-18461191 F EGN_Mt100125 20111014	GO:0000398|mRNA splicing, via spliceosome GO:0006397|mRNA processing GO:0006486|protein glycosylation	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005634|nucleus
pt2_02828	A	A1S	Potri.001G269300	Potri.001G269300(AS)	POPTR_0001s27610	NA	NA	AT1G51200.4	| Symbols: | A20/AN1-like zinc finger family protein | chr1:18985690-18986211 FORWARD LENGTH=173	LOC_Os06g41010.3	protein|zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed	NA	NA	GO:0007067|mitosis GO:0008150|biological_process GO:0048573|photoperiodism, flowering	GO:0003677|DNA binding GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_02829	A	A1S	Potri.001G269400	Potri.001G269400(AS)	POPTR_0001s27620	sp|Q9LHJ8|SAP5_ARATH	Zinc finger A20 and AN1 domain-containing stress-associated protein 5 OS=Arabidopsis thaliana GN=SAP5 PE=2 SV=1	AT3G12630.1	| Symbols: | A20/AN1-like zinc finger family protein | chr3:4012707-4013189 FORWARD LENGTH=160	LOC_Os09g31200.1	protein|AN1-like zinc finger domain containing protein, expressed	NA	NA	GO:0006007|glucose catabolic process GO:0009414|response to water deprivation GO:0016567|protein ubiquitination GO:0051865|protein autoubiquitination	GO:0003677|DNA binding GO:0004842|ubiquitin-protein ligase activity GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_02830	A	A2S	Potri.001G269500	Potri.001G269500(AS) Potri.009G064000(DS)	POPTR_0001s27630	sp|Q54HF6|LSM7_DICDI	Probable U6 snRNA-associated Sm-like protein LSm7 OS=Dictyostelium discoideum GN=lsm7 PE=3 SV=1	AT2G03870.1	| Symbols: | Small nuclear ribonucleoprotein family protein | chr2:1180306-1181256 FORWARD LENGTH=99	LOC_Os08g08040.1	protein|LSM domain containing protein, expressed	NA	NA	NA	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005732|small nucleolar ribonucleoprotein complex
pt2_02831	A	A1S	Potri.001G269600	Potri.001G269600(AS)	POPTR_0001s27640	sp|Q9M573|RL31_PERFR	60S ribosomal protein L31 OS=Perilla frutescens GN=RPL31 PE=2 SV=1	AT2G19740.1	| Symbols: | Ribosomal protein L31e family protein | chr2:8513577-8514346 FORWARD LENGTH=119	LOC_Os08g39500.1	protein|60S ribosomal protein L31, putative, expressed	NA	NA	GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005618|cell wall GO:0005622|intracellular GO:0005737|cytoplasm GO:0005840|ribosome GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0009507|chloroplast GO:0022625|cytosolic large ribosomal subunit GO:0022626|cytosolic ribosome
pt2_02832	A	A2S	Potri.001G269700	Potri.001G269700(AS) Potri.009G064200(DS)	POPTR_0001s27650	sp|Q9ZRT1|GR1_ARATH	Protein gamma response 1 OS=Arabidopsis thaliana GN=GR1 PE=1 SV=2	AT3G52115.1	| Symbols: ATGR1, ATCOM1, COM1, GR1 | gamma response gene 1 | chr3:19326333-19328245 FORWARD LENGTH=588	LOC_Os06g41050.1	protein|expressed protein	NA	NA	GO:0000706|meiotic DNA double-strand break processing GO:0006974|response to DNA damage stimulus GO:0007276|gamete generation GO:0010212|response to ionizing radiation	NA	GO:0005634|nucleus
pt2_02833	G	G1	NA	NA	POPTR_0001s27660	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02834	A	A1S	Potri.001G269900	Potri.001G269900(AS)	POPTR_0001s27670	sp|Q94C11|SUGP1_ARATH	SURP and G-patch domain-containing protein 1-like protein OS=Arabidopsis thaliana GN=At3g52120 PE=2 SV=1	AT3G52120.1	| Symbols: | SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein | chr3:19329243-19331738 FORWARD LENGTH=443	LOC_Os09g10930.1	protein|gamma response I protein, putative, expressed	NA	NA	GO:0006396|RNA processing	GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_02835	A	A1S	Potri.001G269900	Potri.001G269900(AS)	POPTR_0001s27670	sp|Q94C11|SUGP1_ARATH	SURP and G-patch domain-containing protein 1-like protein OS=Arabidopsis thaliana GN=At3g52120 PE=2 SV=1	AT3G52120.1	| Symbols: | SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein | chr3:19329243-19331738 FORWARD LENGTH=443	LOC_Os09g10930.1	protein|gamma response I protein, putative, expressed	NA	NA	GO:0006396|RNA processing	GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_02836	A	A1S	Potri.001G269900	Potri.001G269900(AS)	POPTR_0001s27670	sp|Q94C11|SUGP1_ARATH	SURP and G-patch domain-containing protein 1-like protein OS=Arabidopsis thaliana GN=At3g52120 PE=2 SV=1	AT3G52120.1	| Symbols: | SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein | chr3:19329243-19331738 FORWARD LENGTH=443	LOC_Os09g10930.1	protein|gamma response I protein, putative, expressed	NA	NA	GO:0006396|RNA processing	GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_02837	A	A1S	Potri.001G270000	Potri.001G270000(AS)	POPTR_0001s27680	sp|Q66GR3|BH130_ARATH	Transcription factor bHLH130 OS=Arabidopsis thaliana GN=BHLH130 PE=1 SV=1	AT2G42280.1	| Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr2:17611428-17613163 REVERSE LENGTH=359	LOC_Os08g39630.1	protein|helix-loop-helix DNA-binding domain containing protein, expressed	IMGA|Medtr1g105280.1	Transcription factor bHLH130 chr1 31113232-31108907 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0046685|response to arsenic-containing substance GO:0048573|photoperiodism, flowering	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_02838	A	A1S	Potri.001G270100	Potri.001G270100(AS)	POPTR_0001s27690	sp|Q9LH50|RAA4D_ARATH	Ras-related protein RABA4d OS=Arabidopsis thaliana GN=RABA4D PE=1 SV=1	AT3G12160.1	| Symbols: ATRABA4D, RABA4D | RAB GTPase homolog A4D | chr3:3879495-3880437 REVERSE LENGTH=222	LOC_Os09g10940.1	protein|ras-related protein, putative, expressed	IMGA|contig_80534_1.1	Ras-related protein Rab-25 contig_80534 213-2592 E PREDN 20111014	GO:0007264|small GTPase mediated signal transduction GO:0009827|plant-type cell wall modification GO:0009860|pollen tube growth GO:0015031|protein transport GO:0016192|vesicle-mediated transport GO:0048610|cellular process involved in reproduction GO:0048868|pollen tube development GO:0080092|regulation of pollen tube growth	GO:0005525|GTP binding GO:0019900|kinase binding	GO:0005794|Golgi apparatus GO:0045177|apical part of cell GO:0070382|exocytic vesicle GO:0090404|pollen tube tip
pt2_02839	A	A2S	Potri.001G270300	Potri.001G270300(AS) Potri.001G270400(BS)	POPTR_0001s27700	sp|Q7XU38|C87A3_ORYSJ	Cytochrome P450 87A3 OS=Oryza sativa subsp. japonica GN=CYP87A3 PE=2 SV=3	AT1G12740.1	| Symbols: CYP87A2 | cytochrome P450, family 87, subfamily A, polypeptide 2 | chr1:4342462-4344569 FORWARD LENGTH=472	LOC_Os04g48170.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g010750.1	Cytochrome P450 chr5 2706043-2703036 E EGN_Mt100125 20111014	GO:0006826|iron ion transport GO:0010106|cellular response to iron ion starvation GO:0010167|response to nitrate GO:0015706|nitrate transport GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005739|mitochondrion
pt2_02840	A	A2S	Potri.001G270400	Potri.001G270400(AS) Potri.001G270300(BS)	POPTR_0001s27710	sp|Q7XU38|C87A3_ORYSJ	Cytochrome P450 87A3 OS=Oryza sativa subsp. japonica GN=CYP87A3 PE=2 SV=3	AT1G12740.1	| Symbols: CYP87A2 | cytochrome P450, family 87, subfamily A, polypeptide 2 | chr1:4342462-4344569 FORWARD LENGTH=472	LOC_Os04g48170.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g010750.1	Cytochrome P450 chr5 2706043-2703036 E EGN_Mt100125 20111014	GO:0006826|iron ion transport GO:0010106|cellular response to iron ion starvation GO:0010167|response to nitrate GO:0015706|nitrate transport GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005739|mitochondrion
pt2_02841	A	A2S	Potri.001G270500	Potri.001G270500(AS) Potri.001G270600(AS)	POPTR_0001s27720	sp|Q7XU38|C87A3_ORYSJ	Cytochrome P450 87A3 OS=Oryza sativa subsp. japonica GN=CYP87A3 PE=2 SV=3	AT1G12740.1	| Symbols: CYP87A2 | cytochrome P450, family 87, subfamily A, polypeptide 2 | chr1:4342462-4344569 FORWARD LENGTH=472	LOC_Os04g48170.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g010750.1	Cytochrome P450 chr5 2706043-2703036 E EGN_Mt100125 20111014	GO:0006826|iron ion transport GO:0010106|cellular response to iron ion starvation GO:0010167|response to nitrate GO:0015706|nitrate transport GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005739|mitochondrion
pt2_02842	G	G1	NA	NA	POPTR_0001s27740	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02843	A	A1S	Potri.001G270700	Potri.001G270700(AS)	POPTR_0001s27760	sp|Q7XU38|C87A3_ORYSJ	Cytochrome P450 87A3 OS=Oryza sativa subsp. japonica GN=CYP87A3 PE=2 SV=3	AT1G12740.1	| Symbols: CYP87A2 | cytochrome P450, family 87, subfamily A, polypeptide 2 | chr1:4342462-4344569 FORWARD LENGTH=472	LOC_Os04g48170.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g010750.1	Cytochrome P450 chr5 2706043-2703036 E EGN_Mt100125 20111014	GO:0006826|iron ion transport GO:0010106|cellular response to iron ion starvation GO:0010167|response to nitrate GO:0015706|nitrate transport GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005739|mitochondrion
pt2_02844	A	A1S	Potri.001G270800	Potri.001G270800(AS)	POPTR_0001s27770	sp|Q7XU38|C87A3_ORYSJ	Cytochrome P450 87A3 OS=Oryza sativa subsp. japonica GN=CYP87A3 PE=2 SV=3	AT1G12740.1	| Symbols: CYP87A2 | cytochrome P450, family 87, subfamily A, polypeptide 2 | chr1:4342462-4344569 FORWARD LENGTH=472	LOC_Os04g48170.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g010750.1	Cytochrome P450 chr5 2706043-2703036 E EGN_Mt100125 20111014	GO:0006826|iron ion transport GO:0010106|cellular response to iron ion starvation GO:0010167|response to nitrate GO:0015706|nitrate transport GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005739|mitochondrion
pt2_02845	A	A1S	Potri.001G270900	Potri.001G270900(AS)	POPTR_0001s27780	sp|Q9FI39|THAD_ARATH	Cytochrome P450 705A5 OS=Arabidopsis thaliana GN=CYP705A5 PE=2 SV=1	AT5G47990.1	| Symbols: CYP705A5, THAD, THAD1 | cytochrome P450, family 705, subfamily A, polypeptide 5 | chr5:19434827-19436444 FORWARD LENGTH=511	LOC_Os06g41070.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g018990.1	Cytochrome P450 chr5 6883202-6884868 H EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	NA
pt2_02846	A	A1S	Potri.001G271000	Potri.001G271000(AS)	POPTR_0001s27785	NA	NA	AT3G52130.1	| Symbols: | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr3:19332081-19332458 REVERSE LENGTH=125	NA	NA	NA	NA	GO:0006869|lipid transport	GO:0008289|lipid binding	GO:0005576|extracellular region
pt2_02847	A	A1S	Potri.001G271100	Potri.001G271100(AS)	POPTR_0001s27790	NA	NA	AT5G48020.1	| Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr5:19462888-19464790 REVERSE LENGTH=355	LOC_Os02g48630.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_02848	A	A1S	Potri.001G271200	Potri.001G271200(AS)	POPTR_0001s27800	sp|B0W2S0|K0664_CULQU	Protein KIAA0664 homolog OS=Culex quinquefasciatus GN=CPIJ001445 PE=3 SV=1	AT3G52140.1	| Symbols: | tetratricopeptide repeat (TPR)-containing protein | chr3:19333232-19341295 FORWARD LENGTH=1403	LOC_Os02g48620.2	protein|tetratricopeptide repeat, putative, expressed	NA	NA	GO:0006094|gluconeogenesis GO:0007010|cytoskeleton organization GO:0008150|biological_process GO:0010498|proteasomal protein catabolic process	NA	GO:0005634|nucleus GO:0005829|cytosol GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_02849	A	A1S	Potri.001G271300	Potri.001G271300(AS)	POPTR_0001s27810	sp|Q38813|DNAJ1_ARATH	Chaperone protein dnaJ 1, mitochondrial OS=Arabidopsis thaliana GN=ATJ1 PE=2 SV=2	AT5G48030.1	| Symbols: GFA2 | gametophytic factor 2 | chr5:19466298-19469753 REVERSE LENGTH=456	LOC_Os12g07060.1	protein|chaperone protein dnaJ, putative, expressed	IMGA|Medtr5g065160.1	Chaperone protein dnaJ chr5 26405680-26397253 H EGN_Mt100125 20111014	GO:0000740|nuclear membrane fusion GO:0000741|karyogamy GO:0006457|protein folding GO:0009553|embryo sac development GO:0009558|embryo sac cellularization GO:0009560|embryo sac egg cell differentiation GO:0010197|polar nucleus fusion GO:0010198|synergid death GO:0051085|chaperone mediated protein folding requiring cofactor	GO:0031072|heat shock protein binding GO:0051082|unfolded protein binding	GO:0005739|mitochondrion
pt2_02850	A	A2S	Potri.001G271400	Potri.001G271400(AS) Potri.009G065600(BS)	POPTR_0001s27820	sp|Q6DN14|MCTP1_HUMAN	Multiple C2 and transmembrane domain-containing protein 1 OS=Homo sapiens GN=MCTP1 PE=2 SV=2	AT5G48060.1	| Symbols: | C2 calcium/lipid-binding plant phosphoribosyltransferase family protein | chr5:19475296-19478878 FORWARD LENGTH=1036	LOC_Os05g30750.4	protein|anthranilate phosphoribosyltransferase, putative, expressed	IMGA|Medtr5g010390.1	Glutathione peroxidase chr5 2530505-2527317 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02851	A	A1S	Potri.001G271500	Potri.001G271500(AS)	POPTR_0001s27830	sp|P34091|RL6_MESCR	60S ribosomal protein L6 OS=Mesembryanthemum crystallinum GN=RPL6 PE=2 SV=1	AT1G74050.1	| Symbols: | Ribosomal protein L6 family protein | chr1:27847256-27848680 REVERSE LENGTH=233	LOC_Os04g39700.1	protein|60S ribosomal protein L6, putative, expressed	IMGA|Medtr5g098090.1	60S ribosomal protein L6 chr5 41905275-41906004 E EGN_Mt100125 20111014	GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005737|cytoplasm GO:0005829|cytosol GO:0005840|ribosome GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane GO:0022625|cytosolic large ribosomal subunit
pt2_02852	G	G1	NA	NA	POPTR_0001s27840	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02853	A	A2S	Potri.001G271700	Potri.001G271700(AS) Potri.009G066100(DS)	POPTR_0001s27860	sp|Q39023|MPK3_ARATH	Mitogen-activated protein kinase 3 OS=Arabidopsis thaliana GN=MPK3 PE=1 SV=2	AT3G45640.1	| Symbols: ATMPK3, MPK3, ATMAPK3 | mitogen-activated protein kinase 3 | chr3:16756918-16758476 FORWARD LENGTH=370	LOC_Os06g06090.1	protein|CGMC_MAPKCMGC_2_ERK.12 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	IMGA|Medtr5g010030.1	Mitogen-activated protein kinase chr5 2369912-2371946 F EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0000169|activation of MAPK activity involved in osmosensory signaling pathway GO:0001666|response to hypoxia GO:0002831|regulation of response to biotic stimulus GO:0006355|regulation of transcription, DNA-dependent GO:0006468|protein phosphorylation GO:0006612|protein targeting to membrane GO:0006950|response to stress GO:0006970|response to osmotic stress GO:0006979|response to oxidative stress GO:0007165|signal transduction GO:0009409|response to cold GO:0009595|detection of biotic stimulus GO:0009611|response to wounding GO:0009617|response to bacterium GO:0009697|salicylic acid biosynthetic process GO:0009738|abscisic acid mediated signaling pathway GO:0009814|defense response, incompatible interaction GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010120|camalexin biosynthetic process GO:0010200|response to chitin GO:0010224|response to UV-B GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0010374|stomatal complex development GO:0019684|photosynthesis, light reaction GO:0031347|regulation of defense response GO:0031348|negative regulation of defense response GO:0035304|regulation of protein dephosphorylation GO:0035556|intracellular signal transduction GO:0042742|defense response to bacterium GO:0043069|negative regulation of programmed cell death GO:0043900|regulation of multi-organism process GO:0048481|ovule development GO:0050832|defense response to fungus GO:0051707|response to other organism GO:0080136|priming of cellular response to stress GO:2000037|regulation of stomatal complex patterning GO:2000038|regulation of stomatal complex development	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004707|MAP kinase activity GO:0004713|protein tyrosine kinase activity GO:0005515|protein binding GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus
pt2_02854	A	A2S	Potri.001G271800	Potri.001G271800(AS) Potri.009G066400(DS)	POPTR_0001s27870	sp|Q54FQ8|EI2BG_DICDI	Translation initiation factor eIF-2B subunit gamma OS=Dictyostelium discoideum GN=eif2b3 PE=3 SV=1	AT5G19485.1	| Symbols: | transferases;nucleotidyltransferases | chr5:6573907-6576352 REVERSE LENGTH=456	LOC_Os06g23160.1	protein|bacterial transferase hexapeptide domain containing protein, expressed	NA	NA	GO:0009058|biosynthetic process	GO:0016740|transferase activity GO:0016779|nucleotidyltransferase activity	GO:0005737|cytoplasm
pt2_02855	A	A1S	Potri.001G271900	Potri.001G271900(AS)	POPTR_0001s27880	sp|Q6NPN5|FK113_ARATH	F-box/kelch-repeat protein At5g26960 OS=Arabidopsis thaliana GN=At5g26960 PE=2 SV=1	AT5G26960.1	| Symbols: | Galactose oxidase/kelch repeat superfamily protein | chr5:9484908-9486149 REVERSE LENGTH=413	LOC_Os11g04330.1	protein|OsFBK24 - F-box domain and kelch repeat containing protein, expressed	IMGA|contig_163621_1.1	Kelch-like protein contig_163621 1572-340 E PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_02856	A	A1S	Potri.001G272000	Potri.001G272000(AS)	POPTR_0001s27890	sp|O48790|CCB14_ARATH	Cyclin-B1-4 OS=Arabidopsis thaliana GN=CYCB1-4 PE=2 SV=1	AT2G26760.1	| Symbols: CYCB1;4 | Cyclin B1;4 | chr2:11401551-11403205 FORWARD LENGTH=387	LOC_Os01g59120.1	protein|cyclin, putative, expressed	IMGA|Medtr5g088980.1	Cyclin chr5 37598221-37595207 E EGN_Mt100125 20111014	GO:0000079|regulation of cyclin-dependent protein kinase activity GO:0010440|stomatal lineage progression GO:0051726|regulation of cell cycle	GO:0005515|protein binding GO:0016538|cyclin-dependent protein kinase regulator activity GO:0019901|protein kinase binding	GO:0005634|nucleus
pt2_02857	A	A1S	Potri.001G272100	Potri.001G272100(AS)	POPTR_0001s27900	sp|O22827|MOC2B_ARATH	Molybdopterin synthase catalytic subunit OS=Arabidopsis thaliana GN=MOCS2 PE=2 SV=1	AT2G43760.3	| Symbols: | molybdopterin biosynthesis MoaE family protein | chr2:18133276-18133872 FORWARD LENGTH=198	LOC_Os02g04740.1	protein|molybdenum cofactor synthesis protein 2 large subunit, putative, expressed	NA	NA	GO:0006777|Mo-molybdopterin cofactor biosynthetic process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_02858	A	A1S	Potri.001G272200	Potri.001G272200(AS)	POPTR_0001s27910	sp|Q9LIP4|C71BX_ARATH	Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=CYP71B36 PE=2 SV=1	AT3G26320.1	| Symbols: CYP71B36 | cytochrome P450, family 71, subfamily B, polypeptide 36 | chr3:9644383-9646064 REVERSE LENGTH=500	LOC_Os03g63310.1	protein|cytochrome P450 71E1, putative, expressed	IMGA|Medtr1g023700.1	Cytochrome P450 chr1 7365565-7363737 E EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_02859	A	A2S	Potri.001G272300	Potri.001G272300(AS) Potri.009G066800(BS)	POPTR_0001s27920	NA	NA	AT2G26770.2	| Symbols: | plectin-related | chr2:11404257-11407743 REVERSE LENGTH=496	LOC_Os01g59130.1	protein|proline-rich family protein, putative, expressed	IMGA|Medtr5g088860.1	hypothetical protein chr5 37554106-37549358 F EGN_Mt100125 20111014	GO:0007015|actin filament organization GO:0010119|regulation of stomatal movement GO:0032880|regulation of protein localization	GO:0003779|actin binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02860	A	A1S	Potri.001G272400	Potri.001G272400(AS)	POPTR_0001s27930	NA	NA	AT5G12260.1	| Symbols: | BEST Arabidopsis thaliana protein match is: glycosyltransferase family protein 2 (TAIR:AT5G60700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:3966417-3968684 FORWARD LENGTH=624	LOC_Os01g18060.1	protein|sugar transporter superfamily, putative, expressed	NA	NA	GO:0007129|synapsis GO:0007131|reciprocal meiotic recombination GO:0008150|biological_process GO:0042138|meiotic DNA double-strand break formation	GO:0016757|transferase activity, transferring glycosyl groups	GO:0005575|cellular_component GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_02861	C	C1S	Potri.001G272500	Potri.001G272500(CS)	NA	NA	NA	NA	NA	NA	NA	NA	GO:0010286|heat acclimation GO:0031347|regulation of defense response	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02862	A	A1S	Potri.001G272700	Potri.001G272700(AS)	POPTR_0001s27950	sp|P93176|TBB_HORVU	Tubulin beta chain OS=Hordeum vulgare GN=TUBB PE=2 SV=1	AT5G62700.1	| Symbols: TUB3 | tubulin beta chain 3 | chr5:25184501-25186426 FORWARD LENGTH=450	LOC_Os01g59150.2	protein|tubulin/FtsZ domain containing protein, putative, expressed	IMGA|contig_53526_2.1	Tubulin beta chain contig_53526 5156-2874 H PREDN 20111014	GO:0006184|GTP catabolic process GO:0009409|response to cold GO:0009651|response to salt stress GO:0046686|response to cadmium ion GO:0051258|protein polymerization	GO:0003924|GTPase activity GO:0005198|structural molecule activity GO:0005525|GTP binding	GO:0005618|cell wall GO:0005730|nucleolus GO:0005737|cytoplasm GO:0005794|Golgi apparatus GO:0005874|microtubule GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0043234|protein complex GO:0045298|tubulin complex
pt2_02863	A	A2S	Potri.001G272800	Potri.001G272800(AS) Potri.009G067100(DS)	POPTR_0001s27960	sp|P93176|TBB_HORVU	Tubulin beta chain OS=Hordeum vulgare GN=TUBB PE=2 SV=1	AT5G62700.1	| Symbols: TUB3 | tubulin beta chain 3 | chr5:25184501-25186426 FORWARD LENGTH=450	LOC_Os01g59150.2	protein|tubulin/FtsZ domain containing protein, putative, expressed	IMGA|contig_53526_2.1	Tubulin beta chain contig_53526 5156-2874 H PREDN 20111014	GO:0006184|GTP catabolic process GO:0009409|response to cold GO:0009651|response to salt stress GO:0046686|response to cadmium ion GO:0051258|protein polymerization	GO:0003924|GTPase activity GO:0005198|structural molecule activity GO:0005525|GTP binding	GO:0005618|cell wall GO:0005730|nucleolus GO:0005737|cytoplasm GO:0005794|Golgi apparatus GO:0005874|microtubule GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0043234|protein complex GO:0045298|tubulin complex
pt2_02864	A	A1S	Potri.001G272900	Potri.001G272900(AS)	POPTR_0001s27970	sp|Q93VV5|PTR16_ARATH	Probable peptide/nitrate transporter At1g59740 OS=Arabidopsis thaliana GN=At1g59740 PE=2 SV=1	AT1G59740.1	| Symbols: | Major facilitator superfamily protein | chr1:21968227-21972312 FORWARD LENGTH=591	LOC_Os01g54515.1	protein|peptide transporter PTR2, putative, expressed	IMGA|Medtr5g038380.1	Nitrate transporter NTL1 chr5 16398082-16404412 E EGN_Mt100125 20111014	GO:0006857|oligopeptide transport GO:0009624|response to nematode	GO:0005215|transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_02865	A	A1S	Potri.001G273000	Potri.001G273000(AS)	POPTR_0001s27980	NA	NA	AT1G08500.1	| Symbols: ENODL18, AtENODL18 | early nodulin-like protein 18 | chr1:2689110-2689881 FORWARD LENGTH=228	LOC_Os01g17470.1	protein|plastocyanin-like domain containing protein, putative, expressed	IMGA|Medtr5g088990.1	Early nodulin-like protein chr5 37604593-37606499 F EGN_Mt100125 20111014	NA	GO:0005507|copper ion binding GO:0009055|electron carrier activity	GO:0005886|plasma membrane GO:0031225|anchored to membrane
pt2_02866	A	A1S	Potri.001G273100	Potri.001G273100(AS)	POPTR_0001s27990	sp|Q5BIV3|PPR35_ARATH	Pentatricopeptide repeat-containing protein At1g11900 OS=Arabidopsis thaliana GN=At1g11900 PE=2 SV=1	AT1G11900.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:4013166-4014630 REVERSE LENGTH=367	LOC_Os05g40320.1	protein|PPR repeat domain containing protein, putative, expressed	IMGA|Medtr1g031720.1	Pentatricopeptide repeat-containing protein chr1 9369418-9364959 E EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005739|mitochondrion
pt2_02867	A	A2S	Potri.001G273200	Potri.001G273200(AS) Potri.009G067500(DS)	POPTR_0001s28000	sp|Q9FMP4|PM14_ARATH	Pre-mRNA branch site p14-like protein OS=Arabidopsis thaliana GN=At5g12190 PE=2 SV=1	AT5G12190.1	| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr5:3940731-3941105 REVERSE LENGTH=124	LOC_Os03g59710.1	protein|RNA recognition motif containing protein, putative, expressed	IMGA|Medtr5g089300.1	Pre-mRNA branch site p14-like protein chr5 37764053-37766622 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005634|nucleus
pt2_02868	A	A1S	Potri.001G273300	Potri.001G273300(AS)	POPTR_0001s28010	NA	NA	AT5G19473.1	| Symbols: | RPM1-interacting protein 4 (RIN4) family protein | chr5:6569268-6570680 FORWARD LENGTH=99	LOC_Os10g26540.1	protein|expressed protein	IMGA|Medtr5g089290.1	hypothetical protein chr5 37763824-37762069 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02869	A	A1S	Potri.001G273400	Potri.001G273400(AS)	POPTR_0001s28020	sp|Q55DL0|DPYS_DICDI	Dihydropyrimidinase OS=Dictyostelium discoideum GN=pyd2 PE=1 SV=1	AT5G12200.1	| Symbols: PYD2 | pyrimidine 2 | chr5:3941700-3944727 REVERSE LENGTH=531	LOC_Os01g59340.1	protein|dihydropyrimidinase, putative, expressed	IMGA|Medtr5g089280.1	Dihydropyrimidinase chr5 37756428-37761911 E EGN_Mt100125 20111014	GO:0006208|pyrimidine nucleobase catabolic process GO:0006212|uracil catabolic process GO:0006635|fatty acid beta-oxidation GO:0016558|protein import into peroxisome matrix GO:0043562|cellular response to nitrogen levels	GO:0004157|dihydropyrimidinase activity GO:0016787|hydrolase activity GO:0016810|hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds GO:0016812|hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides	GO:0005783|endoplasmic reticulum GO:0005794|Golgi apparatus GO:0012505|endomembrane system
pt2_02870	A	A1S	Potri.001G273600	Potri.001G273600(AS)	POPTR_0001s28030	sp|Q9Y4W2|LAS1L_HUMAN	Ribosomal biogenesis protein LAS1L OS=Homo sapiens GN=LAS1L PE=1 SV=2	AT5G12220.1	| Symbols: | las1-like family protein | chr5:3950218-3953014 FORWARD LENGTH=611	LOC_Os12g08800.1	protein|las1-like family protein, putative, expressed	IMGA|Medtr5g089190.1	LAS1-like protein chr5 37728663-37723895 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02871	A	A1S	Potri.001G273700	Potri.001G273700(AS)	POPTR_0001s28040	sp|Q7XHZ0|HFB4B_ORYSJ	Heat stress transcription factor B-4b OS=Oryza sativa subsp. japonica GN=HSFB4B PE=2 SV=1	AT1G46264.1	| Symbols: AT-HSFB4, HSFB4, SCZ | heat shock transcription factor B4 | chr1:17224904-17226183 FORWARD LENGTH=348	LOC_Os07g44690.1	protein|HSF-type DNA-binding domain containing protein, expressed	IMGA|Medtr5g089170.1	Heat stress transcription factor B-4 chr5 37713556-37712242 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009408|response to heat	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_02872	A	A2S	Potri.001G273900	Potri.001G273900(AS) Potri.009G068100(DS)	POPTR_0001s28050	sp|Q6NLB1|FB118_ARATH	F-box protein At2g26850 OS=Arabidopsis thaliana GN=At2g26850 PE=2 SV=1	AT2G26850.1	| Symbols: | F-box family protein | chr2:11449369-11450889 REVERSE LENGTH=371	LOC_Os01g17390.1	protein|OsFBX5 - F-box domain containing protein, expressed	IMGA|Medtr5g089110.1	F-box family protein chr5 37691342-37687069 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_02873	A	A2S	Potri.001G274000	Potri.001G274000(AS) Potri.001G273900(AA)	POPTR_0001s28060	NA	NA	NA	NA	NA	NA	IMGA|Medtr5g089100.1	hypothetical protein chr5 37685483-37686745 E EGN_Mt100125 20111014	GO:0006612|protein targeting to membrane GO:0008150|biological_process GO:0009611|response to wounding GO:0009612|response to mechanical stimulus GO:0009646|response to absence of light GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010200|response to chitin GO:0010363|regulation of plant-type hypersensitive response	GO:0003674|molecular_function	GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_02874	A	A1S	Potri.001G274100	Potri.001G274100(AS)	POPTR_0001s28070	sp|O81027|HMGCL_ARATH	Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Arabidopsis thaliana GN=HMGCL PE=1 SV=2	AT2G26800.1	| Symbols: | Aldolase superfamily protein | chr2:11429192-11432185 REVERSE LENGTH=433	LOC_Os12g04020.1	protein|hydroxymethylglutaryl-CoA lyase, putative, expressed	NA	NA	GO:0006551|leucine metabolic process	GO:0003824|catalytic activity GO:0004419|hydroxymethylglutaryl-CoA lyase activity	GO:0005739|mitochondrion
pt2_02875	A	A1S	Potri.001G274200	Potri.001G274200(AS)	POPTR_0001s28080	NA	NA	NA	NA	NA	NA	NA	NA	GO:0007165|signal transduction	GO:0005102|receptor binding GO:0033612|receptor serine/threonine kinase binding	GO:0005739|mitochondrion GO:0048046|apoplast
pt2_02876	A	A1S	Potri.001G274300	Potri.001G274300(AS)	POPTR_0001s28090	sp|P34893|CH10_ARATH	10 kDa chaperonin OS=Arabidopsis thaliana GN=CPN10 PE=2 SV=1	AT1G14980.1	| Symbols: CPN10 | chaperonin 10 | chr1:5165930-5166654 REVERSE LENGTH=98	LOC_Os03g25050.1	protein|chaperonin, putative, expressed	NA	NA	GO:0006457|protein folding GO:0009408|response to heat GO:0009644|response to high light intensity GO:0034976|response to endoplasmic reticulum stress GO:0042542|response to hydrogen peroxide	GO:0005507|copper ion binding GO:0005524|ATP binding GO:0051087|chaperone binding	GO:0005737|cytoplasm GO:0005739|mitochondrion
pt2_02877	A	A1S	Potri.001G274400	Potri.001G274400(AS)	POPTR_0001s28100	NA	NA	AT5G12240.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages. | chr5:3959120-3960777 REVERSE LENGTH=114	LOC_Os07g44744.1	protein|expressed protein	IMGA|Medtr5g089030.1	hypothetical protein chr5 37644713-37648970 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005829|cytosol
pt2_02878	A	A1S	Potri.001G274500	Potri.001G274500(AS)	POPTR_0001s28120	sp|Q5VYK3|ECM29_HUMAN	Proteasome-associated protein ECM29 homolog OS=Homo sapiens GN=ECM29 PE=1 SV=2	AT2G26780.1	| Symbols: | ARM repeat superfamily protein | chr2:11410125-11423598 FORWARD LENGTH=1826	LOC_Os11g04220.1	protein|HEAT repeat family protein, putative, expressed	IMGA|Medtr5g089000.1	Proteasome-associated protein ECM29-like protein chr5 37608725-37638548 H EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0016020|membrane
pt2_02879	A	A1S	Potri.001G274600	Potri.001G274600(AS)	POPTR_0001s28140	sp|P48419|C75A3_PETHY	Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida GN=CYP75A3 PE=2 SV=1	AT5G07990.1	| Symbols: TT7, CYP75B1, D501 | Cytochrome P450 superfamily protein | chr5:2560437-2562859 FORWARD LENGTH=513	LOC_Os03g25150.1	protein|transposon protein, putative, unclassified, expressed	IMGA|Medtr5g070920.1	Cytochrome P450 chr5 29084191-29081597 E EGN_Mt100125 20111014	GO:0009411|response to UV GO:0009718|anthocyanin-containing compound biosynthetic process GO:0009733|response to auxin stimulus GO:0009744|response to sucrose stimulus GO:0009813|flavonoid biosynthetic process GO:0010224|response to UV-B GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0016711|flavonoid 3'-monooxygenase activity GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005576|extracellular region
pt2_02880	B	B2S	Potri.001G274700	Potri.001G274700(BS) Potri.009G069200(DS)	POPTR_0001s28150	sp|Q9FMP5|CDPKH_ARATH	Calcium-dependent protein kinase 17 OS=Arabidopsis thaliana GN=CPK17 PE=2 SV=1	AT5G12180.1	| Symbols: CPK17 | calcium-dependent protein kinase 17 | chr5:3937136-3939323 FORWARD LENGTH=528	LOC_Os01g59360.1	protein|CAMK_CAMK_like.10 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	IMGA|Medtr5g089320.1	Calcium dependent protein kinase chr5 37772048-37769598 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006499|N-terminal protein myristoylation GO:0046777|protein autophosphorylation GO:0080092|regulation of pollen tube growth	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004683|calmodulin-dependent protein kinase activity GO:0005509|calcium ion binding GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005886|plasma membrane
pt2_02881	A	A1S	Potri.001G274800	Potri.001G274800(AS)	POPTR_0001s28160	NA	NA	NA	NA	LOC_Os07g48810.2	protein|parvulin-type peptidyl prolyl cis/trans isomerase, putative, expressed	IMGA|Medtr5g089330.1	Peptidyl-prolyl cis-trans isomerase C chr5 37784212-37773692 E EGN_Mt100125 20111014	NA	GO:0016853|isomerase activity	GO:0009507|chloroplast
pt2_02882	A	A1S	Potri.001G274900	Potri.001G274900(AS)	POPTR_0001s28170	sp|Q9FY48|KEG_ARATH	E3 ubiquitin-protein ligase KEG OS=Arabidopsis thaliana GN=KEG PE=1 SV=2	AT5G13530.1	| Symbols: KEG | protein kinases;ubiquitin-protein ligases | chr5:4345618-4354369 FORWARD LENGTH=1625	LOC_Os05g32570.1	protein|RING E3 ligase protein, putative, expressed	IMGA|Medtr1g012610.1	G protein-coupled receptor kinase chr1 3001173-3003743 F EGN_Mt100125 20111014	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0006468|protein phosphorylation GO:0006952|defense response GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009788|negative regulation of abscisic acid mediated signaling pathway GO:0016567|protein ubiquitination GO:0048589|developmental growth	GO:0004672|protein kinase activity GO:0004713|protein tyrosine kinase activity GO:0004842|ubiquitin-protein ligase activity GO:0005515|protein binding GO:0005524|ATP binding GO:0008270|zinc ion binding GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0043621|protein self-association	GO:0005737|cytoplasm GO:0005769|early endosome GO:0005802|trans-Golgi network
pt2_02883	A	A1S	Potri.001G275000	Potri.001G275000(AS)	POPTR_0001s28180	sp|Q1PFH7|PPR89_ARATH	Pentatricopeptide repeat-containing protein At1g62350 OS=Arabidopsis thaliana GN=At1g62350 PE=2 SV=1	AT1G62350.1	| Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:23056653-23057935 FORWARD LENGTH=196	LOC_Os03g18620.1	protein|PPR repeat domain containing protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_02884	A	A1S	Potri.001G275100	Potri.001G275100(AS)	POPTR_0001s28190	sp|Q9SUD8|PP340_ARATH	Pentatricopeptide repeat-containing protein At4g28010 OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1	AT4G28010.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:13930379-13932493 FORWARD LENGTH=704	LOC_Os07g42880.1	protein|PPR repeat containing protein, expressed	IMGA|Medtr5g029690.1	Pentatricopeptide repeat-containing protein chr5 12239519-12233813 H EGN_Mt100125 20111014	GO:0008150|biological_process GO:0048451|petal formation GO:0048453|sepal formation	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_02885	A	A1S	Potri.001G275200	Potri.001G275200(AS)	POPTR_0001s28200	sp|Q91YM2|RHG35_MOUSE	Rho GTPase-activating protein 35 OS=Mus musculus GN=Arhgap35 PE=1 SV=3	AT5G19390.2	| Symbols: | Rho GTPase activation protein (RhoGAP) with PH domain | chr5:6531906-6538206 FORWARD LENGTH=870	LOC_Os03g24180.1	protein|pleckstrin homology domain-containing protein, putative, expressed	IMGA|Medtr5g089490.1	Rho GTPase-activating protein chr5 37839960-37850612 E EGN_Mt100125 20111014	GO:0007165|signal transduction	GO:0005100|Rho GTPase activator activity GO:0005543|phospholipid binding GO:0035091|phosphatidylinositol binding	GO:0005622|intracellular GO:0005737|cytoplasm GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane
pt2_02886	C	C1S	Potri.001G275300	Potri.001G275300(CS)	NA	NA	AT4G29070.2	| Symbols: | Phospholipase A2 family protein | chr4:14322109-14323035 FORWARD LENGTH=259	LOC_Os07g46420.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_02887	A	A1S	Potri.001G275400	Potri.001G275400(AS)	POPTR_0001s28220	sp|Q5RJH6|SMG7_MOUSE	Protein SMG7 OS=Mus musculus GN=Smg7 PE=1 SV=1	AT5G19400.2	| Symbols: SMG7 | Telomerase activating protein Est1 | chr5:6540603-6544262 FORWARD LENGTH=1059	LOC_Os08g21350.3	protein|cig3, putative, expressed	IMGA|contig_50242_1.1	Smg-7 homolog nonsense mediated mRNA decay factor (C. elegans) contig_50242 5469-336 E PREDN 20111014	GO:0000184|nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:0007126|meiosis GO:0090306|spindle assembly involved in meiosis	GO:0003674|molecular_function	GO:0000932|cytoplasmic mRNA processing body GO:0005634|nucleus
pt2_02888	A	A2S	Potri.001G275500	Potri.001G275500(AS) Potri.001G275600(AA)	POPTR_0001s28230	sp|P95245|PHLC_MYCTU	Phospholipase C 3 OS=Mycobacterium tuberculosis GN=plcC PE=3 SV=2	AT2G26870.1	| Symbols: NPC2 | non-specific phospholipase C2 | chr2:11457117-11459355 REVERSE LENGTH=514	LOC_Os01g72520.1	protein|phosphoesterase family protein, putative, expressed	NA	NA	GO:0008654|phospholipid biosynthetic process GO:0019432|triglyceride biosynthetic process	GO:0016788|hydrolase activity, acting on ester bonds	GO:0005886|plasma membrane
pt2_02889	A	A1S	Potri.001G275600	Potri.001G275600(AS)	POPTR_0001s28240	NA	NA	AT5G13500.3	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25265.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr5:4338676-4340827 FORWARD LENGTH=358	LOC_Os05g32060.1	protein|expressed protein	IMGA|Medtr5g089520.1	hypothetical protein chr5 37879484-37872834 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0016757|transferase activity, transferring glycosyl groups	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_02890	A	A2S	Potri.001G275700	Potri.001G275700(AS) Potri.009G070300(DS)	POPTR_0001s28250	sp|Q9S7C9|ESCA_ARATH	Putative DNA-binding protein ESCAROLA OS=Arabidopsis thaliana GN=ESC PE=2 SV=1	AT5G49700.1	| Symbols: | Predicted AT-hook DNA-binding family protein | chr5:20192599-20193429 FORWARD LENGTH=276	LOC_Os09g28930.1	protein|DNA binding protein, putative, expressed	IMGA|Medtr5g089600.1	hypothetical protein chr5 37915432-37916142 H EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005634|nucleus
pt2_02891	A	A2S	Potri.001G275800	Potri.001G275800(AS) Potri.009G070400(DS)	POPTR_0001s28260	NA	NA	AT5G12300.1	| Symbols: | Calcium-dependent lipid-binding (CaLB domain) family protein | chr5:3978508-3979632 REVERSE LENGTH=374	LOC_Os01g72420.1	protein|C2 domain containing protein, putative, expressed	IMGA|Medtr5g089720.1	hypothetical protein chr5 37961213-37959103 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_02892	A	A1S	Potri.001G275800	Potri.001G275800(AS)	POPTR_0001s28260	NA	NA	AT5G12300.1	| Symbols: | Calcium-dependent lipid-binding (CaLB domain) family protein | chr5:3978508-3979632 REVERSE LENGTH=374	LOC_Os01g72420.1	protein|C2 domain containing protein, putative, expressed	IMGA|Medtr5g089720.1	hypothetical protein chr5 37961213-37959103 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_02893	A	A1S	Potri.001G275900	Potri.001G275900(AS)	POPTR_0001s28270	NA	NA	AT5G19430.1	| Symbols: | RING/U-box superfamily protein | chr5:6553998-6555616 FORWARD LENGTH=255	LOC_Os01g72480.1	protein|zinc finger, C3HC4 type domain containing protein, expressed	NA	NA	GO:0048573|photoperiodism, flowering	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_02894	A	A1S	Potri.001G276100	Potri.001G276100(AS)	POPTR_0001s28280	sp|Q9HFE7|YNW5_SCHPO	Ankyrin repeat-containing protein P16F5.05c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBP16F5.05c PE=2 SV=1	AT5G12320.1	| Symbols: | ankyrin repeat family protein | chr5:3982762-3983899 FORWARD LENGTH=144	LOC_Os07g46500.2	protein|ankyrin repeat domain containing protein, putative, expressed	IMGA|Medtr5g026800.1	Ankyrin repeat domain-containing protein chr5 10816790-10819302 F EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02895	A	A1S	Potri.001G276100	Potri.001G276100(AS)	POPTR_0001s28280	sp|Q9HFE7|YNW5_SCHPO	Ankyrin repeat-containing protein P16F5.05c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBP16F5.05c PE=2 SV=1	AT5G12320.1	| Symbols: | ankyrin repeat family protein | chr5:3982762-3983899 FORWARD LENGTH=144	LOC_Os07g46500.2	protein|ankyrin repeat domain containing protein, putative, expressed	IMGA|Medtr5g026800.1	Ankyrin repeat domain-containing protein chr5 10816790-10819302 F EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02896	B	B1S	Potri.001G276100	Potri.001G276100(BS)	POPTR_0001s28280	sp|Q9HFE7|YNW5_SCHPO	Ankyrin repeat-containing protein P16F5.05c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBP16F5.05c PE=2 SV=1	AT5G12320.1	| Symbols: | ankyrin repeat family protein | chr5:3982762-3983899 FORWARD LENGTH=144	LOC_Os07g46500.2	protein|ankyrin repeat domain containing protein, putative, expressed	IMGA|Medtr5g026800.1	Ankyrin repeat domain-containing protein chr5 10816790-10819302 F EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02897	A	A1S	Potri.001G276200	Potri.001G276200(AS)	POPTR_0001s28290	NA	NA	AT5G12330.1	| Symbols: LRP1 | Lateral root primordium (LRP) protein-related | chr5:3987677-3989074 REVERSE LENGTH=320	LOC_Os01g72490.1	protein|LRP1, putative, expressed	IMGA|Medtr5g089750.1	Short internode related sequence chr5 37981788-37979155 E EGN_Mt100125 20111014	GO:0007155|cell adhesion GO:0009733|response to auxin stimulus GO:0010090|trichome morphogenesis GO:0045010|actin nucleation GO:0048364|root development GO:0048765|root hair cell differentiation GO:0071555|cell wall organization	GO:0042803|protein homodimerization activity	GO:0005575|cellular_component
pt2_02898	A	A1S	Potri.001G276300	Potri.001G276300(AS)	POPTR_0001s28300	sp|Q94CJ8|C3H55_ARATH	Zinc finger CCCH domain-containing protein 55 OS=Arabidopsis thaliana GN=At5g12440 PE=2 SV=3	AT5G12440.3	| Symbols: | CCCH-type zinc fingerfamily protein with RNA-binding domain | chr5:4035891-4038604 REVERSE LENGTH=650	NA	NA	IMGA|Medtr5g008900.1	Zinc finger CCCH domain-containing protein chr5 1751944-1756293 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_02899	A	A1S	Potri.001G276400	Potri.001G276400(AS)	POPTR_0001s28310	NA	NA	AT5G12340.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:3992948-3993610 REVERSE LENGTH=220	LOC_Os01g72360.1	protein|expressed protein	IMGA|Medtr5g089820.1	hypothetical protein chr5 38026220-38025455 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_02900	A	A1S	Potri.001G276500	Potri.001G276500(AS)	POPTR_0001s28320	sp|Q9LFC5|PP360_ARATH	Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1	AT5G01110.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:42114-44303 REVERSE LENGTH=729	LOC_Os03g06910.1	protein|PPR repeat containing protein, expressed	IMGA|Medtr5g090210.1	Pentatricopeptide repeat-containing protein chr5 38260030-38262180 E EGN_Mt100125 20111014	NA	NA	GO:0005739|mitochondrion
pt2_02901	A	A1S	Potri.001G276600	Potri.001G276600(AS)	POPTR_0001s28330	sp|Q9CAL3|CRK2_ARATH	Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=CRK2 PE=2 SV=1	AT1G70520.1	| Symbols: CRK2 | cysteine-rich RLK (RECEPTOR-like protein kinase) 2 | chr1:26584888-26587334 REVERSE LENGTH=649	LOC_Os11g28104.1	protein|TKL_IRAK_DUF26-lf.4 - DUF26 kinases have homology to DUF26 containing loci, expressed	IMGA|Medtr5g033690.1	Cysteine-rich receptor-like protein kinase chr5 14100663-14103784 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0009627|systemic acquired resistance GO:0031347|regulation of defense response	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005576|extracellular region GO:0005886|plasma membrane
pt2_02902	A	A2S	Potri.001G276700	Potri.001G276700(AS) Potri.009G071600(DS)	POPTR_0001s28340	sp|Q9D8V0|HM13_MOUSE	Minor histocompatibility antigen H13 OS=Mus musculus GN=Hm13 PE=1 SV=1	AT2G03120.1	| Symbols: ATSPP, SPP | signal peptide peptidase | chr2:937554-940083 FORWARD LENGTH=344	LOC_Os02g02530.1	protein|signal peptide peptidase domain containing protein, expressed	IMGA|contig_13225_1.1	Minor histocompatibility antigen H13 contig_13225 320-1653 F PREDN 20111014	GO:0006499|N-terminal protein myristoylation GO:0009555|pollen development GO:0009846|pollen germination	GO:0004190|aspartic-type endopeptidase activity	GO:0005783|endoplasmic reticulum GO:0005789|endoplasmic reticulum membrane GO:0016021|integral to membrane
pt2_02903	A	A1S	Potri.001G276700	Potri.001G276700(AS)	POPTR_0001s28340	sp|Q9D8V0|HM13_MOUSE	Minor histocompatibility antigen H13 OS=Mus musculus GN=Hm13 PE=1 SV=1	AT2G03120.1	| Symbols: ATSPP, SPP | signal peptide peptidase | chr2:937554-940083 FORWARD LENGTH=344	LOC_Os02g02530.1	protein|signal peptide peptidase domain containing protein, expressed	IMGA|contig_13225_1.1	Minor histocompatibility antigen H13 contig_13225 320-1653 F PREDN 20111014	GO:0006499|N-terminal protein myristoylation GO:0009555|pollen development GO:0009846|pollen germination	GO:0004190|aspartic-type endopeptidase activity	GO:0005783|endoplasmic reticulum GO:0005789|endoplasmic reticulum membrane GO:0016021|integral to membrane
pt2_02904	A	A1S	Potri.001G276800	Potri.001G276800(AS)	POPTR_0001s28350	NA	NA	AT4G03250.1	| Symbols: | Homeodomain-like superfamily protein | chr4:1425050-1427744 FORWARD LENGTH=507	LOC_Os01g48170.1	protein|homeobox domain containing protein, expressed	IMGA|Medtr5g089870.1	hypothetical protein chr5 38051295-38057264 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_02905	A	A1S	Potri.001G276800	Potri.001G276800(AS)	POPTR_0001s28350	NA	NA	AT4G03250.1	| Symbols: | Homeodomain-like superfamily protein | chr4:1425050-1427744 FORWARD LENGTH=507	LOC_Os01g48170.1	protein|homeobox domain containing protein, expressed	IMGA|Medtr5g089870.1	hypothetical protein chr5 38051295-38057264 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_02906	A	A1S	Potri.001G276900	Potri.001G276900(AS)	POPTR_0001s28360	sp|Q15751|HERC1_HUMAN	Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1 PE=1 SV=2	AT5G19420.1	| Symbols: | Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain | chr5:6547945-6552866 REVERSE LENGTH=1105	LOC_Os01g72320.1	protein|FYVE zinc finger domain containing protein, expressed	IMGA|Medtr5g089900.1	Lateral signaling target protein-like protein chr5 38066312-38075364 E EGN_Mt100125 20111014	GO:0000956|nuclear-transcribed mRNA catabolic process	GO:0003682|chromatin binding GO:0005543|phospholipid binding GO:0008270|zinc ion binding GO:0008536|Ran GTPase binding GO:0046872|metal ion binding	GO:0005737|cytoplasm
pt2_02907	A	A1S	Potri.001G277000	Potri.001G277000(AS)	POPTR_0001s28365	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006468|protein phosphorylation GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway GO:0009611|response to wounding GO:0031347|regulation of defense response	GO:0001653|peptide receptor activity GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0004888|transmembrane signaling receptor activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005575|cellular_component GO:0005886|plasma membrane
pt2_02908	A	A1S	Potri.001G277100	Potri.001G277100(AS)	POPTR_0001s28370	NA	NA	AT3G07910.1	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Reactive oxygen species modulator 1 (InterPro:IPR018450); Has 192 Blast hits to 192 proteins in 80 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 6; Plants - 39; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). | chr3:2523367-2524048 REVERSE LENGTH=74	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_02909	A	A1S	Potri.001G277200	Potri.001G277200(AS)	POPTR_0001s28380	sp|Q7TPD0|INT3_MOUSE	Integrator complex subunit 3 OS=Mus musculus GN=Ints3 PE=1 SV=2	AT4G14590.1	| Symbols: emb2739 | embryo defective 2739 | chr4:8374391-8375962 FORWARD LENGTH=508	LOC_Os11g07030.1	protein|integrator complex subunit 3, putative, expressed	NA	NA	GO:0009793|embryo development ending in seed dormancy	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02910	A	A1S	Potri.001G277300	Potri.001G277300(AS)	POPTR_0001s28390	sp|O81117|C94A1_VICSA	Cytochrome P450 94A1 OS=Vicia sativa GN=CYP94A1 PE=2 SV=2	AT3G56630.1	| Symbols: CYP94D2 | cytochrome P450, family 94, subfamily D, polypeptide 2 | chr3:20978953-20980512 FORWARD LENGTH=499	LOC_Os01g58960.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g070010.1	Cytochrome P450 chr5 28679240-28682095 F EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005576|extracellular region
pt2_02911	A	A1S	Potri.001G277400	Potri.001G277400(AS)	POPTR_0001s28400	sp|Q3EBZ2|SKI23_ARATH	F-box protein SKIP23 OS=Arabidopsis thaliana GN=SKIP23 PE=1 SV=1	AT2G17030.1	| Symbols: | F-box family protein with a domain of unknown function (DUF295) | chr2:7399108-7400650 FORWARD LENGTH=407	NA	NA	IMGA|Medtr1g091800.1	F-box protein chr1 25506849-25509381 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02912	A	A1S	Potri.001G277500	Potri.001G277500(AS)	POPTR_0001s28410	sp|Q94CK4|ANXD8_ARATH	Annexin D8 OS=Arabidopsis thaliana GN=ANNAT8 PE=2 SV=2	AT5G12380.1	| Symbols: ANNAT8 | annexin 8 | chr5:4009223-4010687 FORWARD LENGTH=316	LOC_Os02g51750.1	protein|annexin, putative, expressed	IMGA|Medtr5g063670.1	Annexin chr5 25680904-25678394 F EGN_Mt100125 20111014	GO:0009408|response to heat GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009651|response to salt stress	GO:0005509|calcium ion binding GO:0005544|calcium-dependent phospholipid binding	GO:0005634|nucleus
pt2_02913	A	A2S	Potri.001G277600	Potri.001G277600(AS) Potri.009G072200(DS)	POPTR_0001s28420	NA	NA	AT1G07175.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G29995.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr1:2202382-2202774 FORWARD LENGTH=71	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_02914	A	A3S	Potri.001G277700	Potri.001G277700(AS) Potri.009G072300(BS) Potri.008G028300(DS)	POPTR_0001s28430	sp|Q0WMV8|PHF5B_ARATH	PHD finger-like domain-containing protein 5B OS=Arabidopsis thaliana GN=At1g07170 PE=2 SV=1	AT2G30000.1	| Symbols: | PHF5-like protein | chr2:12804042-12804374 REVERSE LENGTH=110	LOC_Os05g30410.1	protein|PHF5-like protein domain containing protein, expressed	NA	NA	GO:0000398|mRNA splicing, via spliceosome	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005689|U12-type spliceosomal complex
pt2_02915	A	A1S	Potri.001G277800	Potri.001G277800(AS)	POPTR_0001s28440	sp|Q0WMV8|PHF5B_ARATH	PHD finger-like domain-containing protein 5B OS=Arabidopsis thaliana GN=At1g07170 PE=2 SV=1	AT2G30000.1	| Symbols: | PHF5-like protein | chr2:12804042-12804374 REVERSE LENGTH=110	LOC_Os05g30410.1	protein|PHF5-like protein domain containing protein, expressed	NA	NA	GO:0000398|mRNA splicing, via spliceosome	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005689|U12-type spliceosomal complex
pt2_02916	A	A2S	Potri.001G277900	Potri.001G277900(AS) Potri.009G072500(DS)	POPTR_0001s28450	sp|Q5R628|LSM5_PONAB	U6 snRNA-associated Sm-like protein LSm5 OS=Pongo abelii GN=LSM5 PE=3 SV=3	AT5G48870.1	| Symbols: SAD1 | Small nuclear ribonucleoprotein family protein | chr5:19813407-19814362 FORWARD LENGTH=88	LOC_Os05g32310.1	protein|LSM domain containing protein, expressed	NA	NA	GO:0009414|response to water deprivation GO:0009737|response to abscisic acid stimulus	GO:0003723|RNA binding	GO:0005634|nucleus GO:0005732|small nucleolar ribonucleoprotein complex
pt2_02917	A	A1S	Potri.001G278000	Potri.001G278000(AS)	POPTR_0001s28460	sp|Q5RCP3|NAA38_PONAB	N-alpha-acetyltransferase 38, NatC auxiliary subunit OS=Pongo abelii GN=NAA38 PE=3 SV=3	AT1G65700.2	| Symbols: | Small nuclear ribonucleoprotein family protein | chr1:24434463-24435870 REVERSE LENGTH=98	LOC_Os05g51650.1	protein|LSM domain containing protein, expressed	NA	NA	GO:0002237|response to molecule of bacterial origin GO:0006626|protein targeting to mitochondrion GO:0007165|signal transduction GO:0008150|biological_process GO:0010103|stomatal complex morphogenesis GO:0048443|stamen development	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005732|small nucleolar ribonucleoprotein complex GO:0005829|cytosol
pt2_02918	A	A1S	Potri.001G278100	Potri.001G278100(AS)	POPTR_0001s28470	sp|Q7XU38|C87A3_ORYSJ	Cytochrome P450 87A3 OS=Oryza sativa subsp. japonica GN=CYP87A3 PE=2 SV=3	AT1G12740.1	| Symbols: CYP87A2 | cytochrome P450, family 87, subfamily A, polypeptide 2 | chr1:4342462-4344569 FORWARD LENGTH=472	LOC_Os04g48170.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g010750.1	Cytochrome P450 chr5 2706043-2703036 E EGN_Mt100125 20111014	GO:0006826|iron ion transport GO:0010106|cellular response to iron ion starvation GO:0010167|response to nitrate GO:0015706|nitrate transport GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005739|mitochondrion
pt2_02919	A	A1S	Potri.001G278200	Potri.001G278200(AS)	POPTR_0001s28480	sp|O49561|G2OX8_ARATH	Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=2	AT5G58660.1	| Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr5:23701509-23703802 FORWARD LENGTH=352	LOC_Os04g33360.1	protein|gibberellin 2-beta-dioxygenase 7, putative, expressed	IMGA|Medtr5g005570.1	Gibberellin 2-beta-dioxygenase chr5 271078-268212 H EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_02920	A	A1S	Potri.001G278300	Potri.001G278300(AS)	POPTR_0001s28490	NA	NA	AT5G58600.1	| Symbols: PMR5, TBL44 | Plant protein of unknown function (DUF828) | chr5:23683944-23685679 REVERSE LENGTH=402	LOC_Os03g18110.1	protein| proteins of unknown function domain containing protein, putative, expressed	IMGA|Medtr5g071350.1	hypothetical protein chr5 29305092-29308893 H EGN_Mt100125 20111014	GO:0006333|chromatin assembly or disassembly GO:0009620|response to fungus	GO:0003674|molecular_function	GO:0005783|endoplasmic reticulum
pt2_02921	A	A1S	Potri.001G278400	Potri.001G278400(AS)	POPTR_0001s28500	sp|P49078|ASNS_ARATH	Asparagine synthetase [glutamine-hydrolyzing] OS=Arabidopsis thaliana GN=ASN1 PE=2 SV=2	AT3G47340.1	| Symbols: ASN1, DIN6, AT-ASN1 | glutamine-dependent asparagine synthase 1 | chr3:17438136-17441043 REVERSE LENGTH=584	LOC_Os06g15420.1	protein|asparagine synthetase, putative, expressed	IMGA|Medtr5g071360.1	Asparagine synthetase chr5 29314912-29309800 F EGN_Mt100125 20111014	GO:0006529|asparagine biosynthetic process GO:0009063|cellular amino acid catabolic process GO:0009416|response to light stimulus GO:0009646|response to absence of light GO:0009744|response to sucrose stimulus GO:0009749|response to glucose stimulus GO:0009750|response to fructose stimulus GO:0043617|cellular response to sucrose starvation	GO:0004066|asparagine synthase (glutamine-hydrolyzing) activity	GO:0005737|cytoplasm
pt2_02922	A	A1S	Potri.001G278500	Potri.001G278500(AS)	POPTR_0001s28510	sp|O80871|P2C25_ARATH	Probable protein phosphatase 2C 25 OS=Arabidopsis thaliana GN=At2g30020 PE=1 SV=1	AT2G30020.1	| Symbols: | Protein phosphatase 2C family protein | chr2:12814437-12815904 FORWARD LENGTH=396	LOC_Os03g18150.1	protein|protein phosphatase 2C, putative, expressed	IMGA|Medtr5g071550.1	Protein phosphatase 2C chr5 29411212-29413553 F EGN_Mt100125 20111014	GO:0006470|protein dephosphorylation GO:0009611|response to wounding GO:0009620|response to fungus GO:0009738|abscisic acid mediated signaling pathway GO:0050832|defense response to fungus	GO:0003824|catalytic activity GO:0004722|protein serine/threonine phosphatase activity	GO:0008287|protein serine/threonine phosphatase complex GO:0009536|plastid
pt2_02923	A	A1S	Potri.001G278600	Potri.001G278600(AS)	POPTR_0001s28520	sp|Q9FZ36|M3K2_ARATH	Mitogen-activated protein kinase kinase kinase 2 OS=Arabidopsis thaliana GN=ANP2 PE=2 SV=1	AT1G07150.2	| Symbols: MAPKKK13 | mitogen-activated protein kinase kinase kinase 13 | chr1:2193983-2195736 REVERSE LENGTH=493	LOC_Os03g18170.1	protein|STE_MEKK_ste11_MAP3K.13 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	IMGA|Medtr5g071560.1	Serine/threonine protein kinase chr5 29427044-29430481 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus
pt2_02924	A	A21S	Potri.005G153700	Potri.005G153700(AS) Potri.T098000(AS) Potri.001G299100(AS) Potri.001G297800(AS) Potri.018G075600(AS) Potri.004G097600(AS) Potri.014G026000(AS) Potri.003G006700(AS) Potri.015G012100(AS) Potri.014G091900(DS) Potri.012G066400(DS) Potri.011G094000(DS) Potri.005G135800(DS) Potri.002G200700(DS) Potri.017G008500(DS) Potri.019G061100(DS) Potri.001G236600(DS) Potri.010G017700(DS) Potri.008G176600(DS) Potri.001G238000(DS) Potri.001G402200(DS)	POPTR_0001s28530	NA	NA	AT5G05800.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 881 Blast hits to 512 proteins in 30 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 38; Plants - 833; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). | chr5:1743234-1744751 REVERSE LENGTH=449	LOC_Os12g10550.1	protein|transposon protein, putative, CACTA, En/Spm sub-class, expressed	IMGA|Medtr5g054570.1	PIF-like protein chr5 21936286-21937344 H EGN_Mt100125 20111014	GO:0008150|biological_process GO:0048573|photoperiodism, flowering	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_02925	A	A2S	Potri.001G278800	Potri.001G278800(AS) Potri.009G073300(DS)	POPTR_0001s28540	sp|Q2QYW2|CLH2_ORYSJ	Clathrin heavy chain 2 OS=Oryza sativa subsp. japonica GN=Os12g0104800 PE=3 SV=1	AT3G11130.1	| Symbols: | Clathrin, heavy chain | chr3:3482575-3491667 REVERSE LENGTH=1705	LOC_Os12g01390.1	protein|clathrin heavy chain, putative, expressed	IMGA|Medtr5g082900.1	Clathrin heavy chain chr5 34719270-34732522 E EGN_Mt100125 20111014	GO:0006886|intracellular protein transport GO:0006897|endocytosis GO:0016192|vesicle-mediated transport	GO:0005198|structural molecule activity GO:0005515|protein binding	GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0030130|clathrin coat of trans-Golgi network vesicle GO:0030132|clathrin coat of coated pit
pt2_02926	A	A1S	Potri.001G278900	Potri.001G278900(AS)	POPTR_0001s28550	sp|P92985|RBP1C_ARATH	Ran-binding protein 1 homolog c OS=Arabidopsis thaliana GN=RANBP1C PE=2 SV=1	AT5G58590.1	| Symbols: RANBP1 | RAN binding protein 1 | chr5:23680319-23681714 REVERSE LENGTH=219	LOC_Os03g18180.1	protein|ranBP1 domain containing protein, expressed	NA	NA	GO:0000060|protein import into nucleus, translocation GO:0046907|intracellular transport	GO:0008536|Ran GTPase binding	GO:0005634|nucleus
pt2_02927	G	G1	NA	NA	POPTR_0001s28560	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02928	A	A1S	Potri.001G279000	Potri.001G279000(AS)	POPTR_0001s28570	sp|Q9LI74|CHUP1_ARATH	Protein CHUP1, chloroplastic OS=Arabidopsis thaliana GN=CHUP1 PE=1 SV=1	AT1G07120.1	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: inflorescence meristem, petal, leaf whorl, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G18570.1); Has 288 Blast hits to 260 proteins in 50 species: Archae - 0; Bacteria - 8; Metazoa - 27; Fungi - 15; Plants - 163; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). | chr1:2184874-2186580 REVERSE LENGTH=392	LOC_Os03g18300.1	protein|chloroplast unusual positioning protein, putative, expressed	IMGA|Medtr5g071840.1	Protein CHUP1 chr5 29555968-29553205 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009941|chloroplast envelope
pt2_02929	A	A1S	Potri.001G279000	Potri.001G279000(AS)	POPTR_0001s28570	sp|Q9LI74|CHUP1_ARATH	Protein CHUP1, chloroplastic OS=Arabidopsis thaliana GN=CHUP1 PE=1 SV=1	AT1G07120.1	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: inflorescence meristem, petal, leaf whorl, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G18570.1); Has 288 Blast hits to 260 proteins in 50 species: Archae - 0; Bacteria - 8; Metazoa - 27; Fungi - 15; Plants - 163; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). | chr1:2184874-2186580 REVERSE LENGTH=392	LOC_Os03g18300.1	protein|chloroplast unusual positioning protein, putative, expressed	IMGA|Medtr5g071840.1	Protein CHUP1 chr5 29555968-29553205 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009941|chloroplast envelope
pt2_02930	G	G1	NA	NA	POPTR_0001s28580	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02931	A	A2S	Potri.001G279100	Potri.001G279100(AS) Potri.009G073800(DS)	POPTR_0001s28590	sp|Q9MB58|F26_ARATH	 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase OS=Arabidopsis thaliana GN=FKFBP PE=1 SV=1	AT1G07110.1	| Symbols: F2KP, ATF2KP, FKFBP | fructose-2,6-bisphosphatase | chr1:2178363-2183980 REVERSE LENGTH=744	LOC_Os05g07130.1	protein|6PF-2-K/Fru-2,6-P2ASE liver isozyme, putative, expressed	IMGA|Medtr5g071920.1	 "6-phosphofructo-2-kinase/fructose-2,6-biphosphatase" chr5 29592324-29599212 E EGN_Mt100125 20111014	GO:0006000|fructose metabolic process GO:0006002|fructose 6-phosphate metabolic process GO:0006003|fructose 2,6-bisphosphate metabolic process GO:0006499|N-terminal protein myristoylation GO:0008152|metabolic process GO:0042732|D-xylose metabolic process GO:0043609|regulation of carbon utilization	GO:0003824|catalytic activity GO:0003873|6-phosphofructo-2-kinase activity GO:0004331|fructose-2,6-bisphosphate 2-phosphatase activity GO:0005524|ATP binding GO:0030246|carbohydrate binding GO:2001070|starch binding	GO:0005634|nucleus GO:0005829|cytosol GO:0005886|plasma membrane
pt2_02932	G	G1	NA	NA	POPTR_0001s28610	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02933	A	A2S	Potri.001G279300	Potri.001G279300(AS) Potri.009G074100(DS)	POPTR_0001s28620	sp|O64738|ZIP6_ARATH	Zinc transporter 6, chloroplastic OS=Arabidopsis thaliana GN=ZIP6 PE=2 SV=1	AT2G30080.1	| Symbols: ZIP6, ATZIP6 | ZIP metal ion transporter family | chr2:12838730-12840112 REVERSE LENGTH=341	LOC_Os05g07210.1	protein|metal cation transporter, putative, expressed	IMGA|Medtr5g071990.1	Zinc transporter chr5 29623620-29621192 E EGN_Mt100125 20111014	GO:0006812|cation transport GO:0009624|response to nematode GO:0030001|metal ion transport GO:0055085|transmembrane transport GO:0071577|zinc ion transmembrane transport	GO:0005385|zinc ion transmembrane transporter activity GO:0008324|cation transmembrane transporter activity GO:0046873|metal ion transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_02934	A	A1S	Potri.001G279400	Potri.001G279400(AS)	POPTR_0001s28630	NA	NA	AT2G30090.1	| Symbols: | Acyl-CoA N-acyltransferases (NAT) superfamily protein | chr2:12843583-12845597 REVERSE LENGTH=386	LOC_Os03g55530.1	protein|HLS, putative, expressed	IMGA|Medtr5g015810.1	hypothetical protein chr5 5289463-5287969 H EGN_Mt100125 20111014	GO:0008152|metabolic process	GO:0008080|N-acetyltransferase activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02935	A	A1S	Potri.001G279500	Potri.001G279500(AS)	POPTR_0001s28640	sp|Q8RX71|BAG4_ARATH	BAG family molecular chaperone regulator 4 OS=Arabidopsis thaliana GN=BAG4 PE=1 SV=1	AT3G51780.1	| Symbols: ATBAG4, BAG4 | BCL-2-associated athanogene 4 | chr3:19207029-19208178 REVERSE LENGTH=269	LOC_Os01g61500.1	protein|BAG domain containing protein, expressed	IMGA|contig_48397_1.1	Protein binding protein contig_48397 106-3094 F PREDN 20111014	GO:0009409|response to cold GO:0009651|response to salt stress GO:0010228|vegetative to reproductive phase transition of meristem	GO:0051087|chaperone binding	GO:0005634|nucleus GO:0005829|cytosol
pt2_02936	C	C1S	Potri.001G279600	Potri.001G279600(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02937	A	A1S	Potri.001G279700	Potri.001G279700(AS)	POPTR_0001s28660	NA	NA	AT5G58575.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Sgf11, transcriptional regulation (InterPro:IPR013246); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:23674399-23675224 FORWARD LENGTH=181	LOC_Os05g28370.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02938	A	A1S	Potri.001G279800	Potri.001G279800(AS)	POPTR_0001s28670	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	NA	GO:0005739|mitochondrion
pt2_02939	A	A1S	Potri.001G279900	Potri.001G279900(AS)	POPTR_0001s28680	sp|Q2N2K0|PHYK3_SOYBN	Probable phytol kinase 3, chloroplastic OS=Glycine max PE=2 SV=1	AT5G58560.1	| Symbols: | Phosphatidate cytidylyltransferase family protein | chr5:23670513-23672570 FORWARD LENGTH=307	LOC_Os01g61560.1	protein|phosphatidate cytidylyltransferase, putative, expressed	NA	NA	GO:0006720|isoprenoid metabolic process GO:0008654|phospholipid biosynthetic process GO:0009737|response to abscisic acid stimulus GO:0010228|vegetative to reproductive phase transition of meristem GO:0016487|farnesol metabolic process GO:0016926|protein desumoylation GO:0048440|carpel development GO:0050665|hydrogen peroxide biosynthetic process	GO:0004605|phosphatidate cytidylyltransferase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0052668|farnesol kinase activity GO:0052669|CTP:2-trans,-6-trans-farnesol kinase activity GO:0052670|geraniol kinase activity GO:0052671|geranylgeraniol kinase activity	GO:0009507|chloroplast GO:0016020|membrane
pt2_02940	A	A1S	Potri.001G280000	Potri.001G280000(AS)	POPTR_0001s28690	sp|Q700D9|MYBF_ARATH	Putative Myb family transcription factor At1g14600 OS=Arabidopsis thaliana GN=At1g14600 PE=2 SV=2	AT2G38300.1	| Symbols: | myb-like HTH transcriptional regulator family protein | chr2:16044175-16045679 REVERSE LENGTH=340	LOC_Os12g01490.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr1g051035.1	hypothetical protein chr1 14486605-14487366 X EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_02941	A	A1S	Potri.001G280100	Potri.001G280100(AS)	POPTR_0001s28700	sp|O65020|ETO1_ARATH	Ethylene-overproduction protein 1 OS=Arabidopsis thaliana GN=ETO1 PE=1 SV=2	AT3G51770.1	| Symbols: ETO1, ATEOL1 | tetratricopeptide repeat (TPR)-containing protein | chr3:19200328-19203974 REVERSE LENGTH=951	LOC_Os03g18360.1	protein|BTBT1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with tetratricopeptide repeats, expressed	NA	NA	GO:0006487|protein N-linked glycosylation GO:0009693|ethylene biosynthetic process GO:0009755|hormone-mediated signaling pathway GO:0010182|sugar mediated signaling pathway GO:0010364|regulation of ethylene biosynthetic process GO:0016036|cellular response to phosphate starvation GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0048585|negative regulation of response to stimulus GO:0048825|cotyledon development GO:2000069|regulation of post-embryonic root development	GO:0005515|protein binding GO:0030674|protein binding, bridging	GO:0005634|nucleus
pt2_02942	A	A1S	Potri.001G280200	Potri.001G280200(AS)	POPTR_0001s28710	sp|Q9SIZ4|Y2027_ARATH	Inactive receptor-like serine/threonine-protein kinase At2g40270 OS=Arabidopsis thaliana GN=At2g40270 PE=1 SV=2	AT2G40270.2	| Symbols: | Protein kinase family protein | chr2:16822136-16824327 REVERSE LENGTH=482	LOC_Os03g18370.1	protein|MRH1, putative, expressed	IMGA|Medtr5g010440.2	hypothetical protein chr5 2558199-2554744 F EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0009507|chloroplast
pt2_02943	A	A1S	Potri.001G280300	Potri.001G280300(AS)	POPTR_0001s28720	NA	NA	AT5G66770.1	| Symbols: | GRAS family transcription factor | chr5:26660723-26662477 FORWARD LENGTH=584	NA	NA	NA	NA	GO:0006355|regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02944	A	A2S	Potri.001G280400	Potri.001G280400(AS) Potri.009G075600(DS)	POPTR_0001s28730	sp|Q9FLE8|Y5986_ARATH	Uncharacterized protein At5g39865 OS=Arabidopsis thaliana GN=At5g39865 PE=1 SV=1	AT5G58530.1	| Symbols: | Glutaredoxin family protein | chr5:23660428-23661249 FORWARD LENGTH=273	LOC_Os01g61350.1	protein|glutaredoxin, putative, expressed	IMGA|Medtr5g072400.1	hypothetical protein chr5 29778879-29777959 E EGN_Mt100125 20111014	GO:0045454|cell redox homeostasis GO:0048653|anther development	GO:0009055|electron carrier activity GO:0015035|protein disulfide oxidoreductase activity	GO:0005634|nucleus
pt2_02945	A	A1S	Potri.001G280500	Potri.001G280500(AS)	POPTR_0001s28740	sp|P0C895|Y2010_ARATH	LRR repeats and ubiquitin-like domain-containing protein At2g30105 OS=Arabidopsis thaliana GN=At2g30105 PE=1 SV=1	AT2G30105.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT5G07910.1). | chr2:12849855-12851908 FORWARD LENGTH=367	LOC_Os10g31790.1	protein|ubiquitin family protein, putative, expressed	IMGA|Medtr5g024780.1	Leucine-rich repeat-containing protein chr5 9726976-9724870 H EGN_Mt100125 20111014	NA	NA	NA
pt2_02946	A	A1S	Potri.001G280600	Potri.001G280600(AS)	POPTR_0001s28750	sp|P93028|UBE11_ARATH	Ubiquitin-activating enzyme E1 1 OS=Arabidopsis thaliana GN=UBA1 PE=1 SV=1	AT2G30110.1	| Symbols: ATUBA1, MOS5, UBA1 | ubiquitin-activating enzyme 1 | chr2:12852632-12857369 REVERSE LENGTH=1080	LOC_Os11g01510.2	protein|ubiquitin-activating enzyme, putative, expressed	IMGA|Medtr5g072480.2	Ubiquitin-activating enzyme E1 chr5 29842416-29830673 F EGN_Mt100125 20111014	GO:0006464|cellular protein modification process GO:0006486|protein glycosylation GO:0006487|protein N-linked glycosylation GO:0006511|ubiquitin-dependent protein catabolic process GO:0006635|fatty acid beta-oxidation GO:0006888|ER to Golgi vesicle-mediated transport GO:0009407|toxin catabolic process GO:0016567|protein ubiquitination GO:0043090|amino acid import GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0046686|response to cadmium ion GO:0051707|response to other organism GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0004839|ubiquitin activating enzyme activity GO:0004842|ubiquitin-protein ligase activity GO:0005524|ATP binding GO:0008641|small protein activating enzyme activity	GO:0005634|nucleus GO:0005829|cytosol GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_02947	A	A2S	Potri.001G280700	Potri.001G280700(AS) Potri.009G075900(DS)	POPTR_0001s28760	sp|Q54I36|PYK3_DICDI	Dual specificity protein kinase pyk3 OS=Dictyostelium discoideum GN=pyk3 PE=1 SV=1	AT5G58520.1	| Symbols: | Protein kinase superfamily protein | chr5:23655312-23657943 FORWARD LENGTH=604	LOC_Os03g18430.1	protein|protein kinase, putative, expressed	IMGA|Medtr5g072500.1	Serine/threonine protein kinase HT1 chr5 29849102-29844536 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process	GO:0004672|protein kinase activity GO:0004712|protein serine/threonine/tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_02948	C	C1S	Potri.001G280900	Potri.001G280900(CS)	NA	NA	AT5G58510.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55060.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:23648287-23654421 REVERSE LENGTH=963	LOC_Os03g18440.1	protein|expressed protein	NA	NA	GO:0006486|protein glycosylation GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005737|cytoplasm GO:0009507|chloroplast
pt2_02949	A	A1S	Potri.001G281000	Potri.001G281000(AS)	POPTR_0001s28780	NA	NA	AT1G07090.1	| Symbols: LSH6 | Protein of unknown function (DUF640) | chr1:2174202-2174792 REVERSE LENGTH=196	LOC_Os01g61310.1	protein|DUF640 domain containing protein, putative, expressed	IMGA|Medtr5g072510.1	hypothetical protein chr5 29863728-29865781 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02950	R	R	NA	NA	POPTR_0001s28790	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02951	A	A1S	Potri.001G281200	Potri.001G281200(AS)	POPTR_0001s28800	sp|Q2UAP8|TIM22_ASPOR	Mitochondrial import inner membrane translocase subunit tim22 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=tim22 PE=3 SV=1	AT3G10110.1	| Symbols: MEE67 | Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein | chr3:3116225-3117378 FORWARD LENGTH=173	LOC_Os03g18500.1	protein|mitochondrial import inner membrane translocase subunit Tim17, putative, expressed	NA	NA	GO:0009793|embryo development ending in seed dormancy GO:0015031|protein transport	GO:0015450|P-P-bond-hydrolysis-driven protein transmembrane transporter activity	GO:0005744|mitochondrial inner membrane presequence translocase complex GO:0009507|chloroplast
pt2_02952	A	A2S	Potri.001G281300	Potri.001G281300(AS) Potri.009G076600(DS)	POPTR_0001s28810	NA	NA	AT5G58470.2	| Symbols: TAF15b | TBP-associated factor 15B | chr5:23638566-23640854 REVERSE LENGTH=422	LOC_Os01g07070.2	protein|transposon protein, putative, CACTA, En/Spm sub-class, expressed	NA	NA	GO:0008150|biological_process	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0009507|chloroplast
pt2_02953	A	A1S	Potri.001G281400	Potri.001G281400(AS)	POPTR_0001s28820	NA	NA	AT2G30120.2	| Symbols: | unknown protein; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14750.1); Has 2527 Blast hits to 2101 proteins in 358 species: Archae - 77; Bacteria - 245; Metazoa - 1087; Fungi - 215; Plants - 350; Viruses - 4; Other Eukaryotes - 549 (source: NCBI BLink). | chr2:12860607-12861862 REVERSE LENGTH=288	LOC_Os03g60360.1	protein|protein kinase PKN/PRK1, effector, putative, expressed	IMGA|Medtr5g072760.1	hypothetical protein chr5 29972181-29976763 E EGN_Mt100125 20111014	GO:0008150|biological_process GO:0048573|photoperiodism, flowering	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_02954	C	C1S	Potri.001G281500	Potri.001G281500(CS)	NA	NA	AT1G07060.1	| Symbols: | unknown protein; Has 30 Blast hits to 30 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:2167138-2168397 REVERSE LENGTH=233	LOC_Os12g01540.1	protein|expressed protein	NA	NA	GO:0007126|meiosis GO:0042138|meiotic DNA double-strand break formation	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_02955	A	A1S	Potri.001G281600	Potri.001G281600(AS)	POPTR_0001s28840	sp|Q8LBW3|LBD12_ARATH	LOB domain-containing protein 12 OS=Arabidopsis thaliana GN=LBD12 PE=2 SV=2	AT2G30130.1	| Symbols: ASL5, LBD12, PCK1 | Lateral organ boundaries (LOB) domain family protein | chr2:12868740-12869684 FORWARD LENGTH=193	LOC_Os05g27980.1	protein|DUF260 domain containing protein, putative, expressed	IMGA|Medtr5g083230.1	LOB domain-containing protein chr5 34907168-34908456 H EGN_Mt100125 20111014	GO:0009965|leaf morphogenesis GO:0010016|shoot morphogenesis	GO:0003677|DNA binding	GO:0005634|nucleus
pt2_02956	A	A1S	Potri.001G281700	Potri.001G281700(AS)	POPTR_0001s28850	sp|Q9LU68|CIA2_ARATH	Protein CHLOROPLAST IMPORT APPARATUS 2 OS=Arabidopsis thaliana GN=CIA2 PE=2 SV=1	AT1G07050.1	| Symbols: | CCT motif family protein | chr1:2164327-2165133 REVERSE LENGTH=195	LOC_Os02g05470.1	protein|CCT motif family protein, expressed	IMGA|Medtr5g072780.1	Zinc finger protein CONSTANS-like protein chr5 29979636-29981275 F EGN_Mt100125 20111014	GO:0007623|circadian rhythm GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02957	A	A1S	Potri.001G281800	Potri.001G281800(AS)	POPTR_0001s28860	sp|O64732|U87A1_ARATH	UDP-glycosyltransferase 87A1 OS=Arabidopsis thaliana GN=UGT87A1 PE=2 SV=1	AT2G30150.1	| Symbols: | UDP-Glycosyltransferase superfamily protein | chr2:12874706-12876122 FORWARD LENGTH=440	LOC_Os01g59110.1	protein|indole-3-acetate beta-glucosyltransferase, putative, expressed	IMGA|Medtr5g072860.1	Cytokinin-O-glucosyltransferase chr5 30009055-30010576 E EGN_Mt100125 20111014	GO:0008152|metabolic process	GO:0008194|UDP-glycosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups	NA
pt2_02958	B	B1S	Potri.001G281900	Potri.001G281900(BS)	POPTR_0001s28870	sp|O64733|U87A2_ARATH	UDP-glycosyltransferase 87A2 OS=Arabidopsis thaliana GN=UGT87A2 PE=2 SV=1	AT2G30140.1	| Symbols: | UDP-Glycosyltransferase superfamily protein | chr2:12872200-12873691 FORWARD LENGTH=455	LOC_Os01g59110.1	protein|indole-3-acetate beta-glucosyltransferase, putative, expressed	IMGA|Medtr5g072860.1	Cytokinin-O-glucosyltransferase chr5 30009055-30010576 E EGN_Mt100125 20111014	GO:0009407|toxin catabolic process GO:0009627|systemic acquired resistance GO:0009909|regulation of flower development GO:0010583|response to cyclopentenone GO:0034976|response to endoplasmic reticulum stress	GO:0008194|UDP-glycosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol
pt2_02959	A	A2S	Potri.001G282000	Potri.001G282000(AS) Potri.009G077200(DS)	POPTR_0001s28880	sp|O64733|U87A2_ARATH	UDP-glycosyltransferase 87A2 OS=Arabidopsis thaliana GN=UGT87A2 PE=2 SV=1	AT2G30140.1	| Symbols: | UDP-Glycosyltransferase superfamily protein | chr2:12872200-12873691 FORWARD LENGTH=455	LOC_Os01g59110.1	protein|indole-3-acetate beta-glucosyltransferase, putative, expressed	IMGA|Medtr5g072860.1	Cytokinin-O-glucosyltransferase chr5 30009055-30010576 E EGN_Mt100125 20111014	GO:0009407|toxin catabolic process GO:0009627|systemic acquired resistance GO:0009909|regulation of flower development GO:0010583|response to cyclopentenone GO:0034976|response to endoplasmic reticulum stress	GO:0008194|UDP-glycosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol
pt2_02960	A	A1S	Potri.001G282100	Potri.001G282100(AS)	POPTR_0001s28890	sp|O64733|U87A2_ARATH	UDP-glycosyltransferase 87A2 OS=Arabidopsis thaliana GN=UGT87A2 PE=2 SV=1	AT2G30140.2	| Symbols: | UDP-Glycosyltransferase superfamily protein | chr2:12872200-12873691 FORWARD LENGTH=454	LOC_Os01g59110.1	protein|indole-3-acetate beta-glucosyltransferase, putative, expressed	IMGA|Medtr5g072810.1	Indole-3-acetate beta-glucosyltransferase chr5 29987132-29989246 F EGN_Mt100125 20111014	GO:0009407|toxin catabolic process GO:0009627|systemic acquired resistance GO:0009909|regulation of flower development GO:0010583|response to cyclopentenone GO:0034976|response to endoplasmic reticulum stress	GO:0008194|UDP-glycosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol
pt2_02961	A	A1S	Potri.001G282200	Potri.001G282200(AS)	POPTR_0001s28900	sp|Q9LNG5|PPP7L_ARATH	Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana GN=At1g48120 PE=2 SV=1	AT2G04865.1	| Symbols: | Aminotransferase-like, plant mobile domain family protein | chr2:1712149-1714599 FORWARD LENGTH=667	LOC_Os01g07350.1	protein|transposon protein, putative, unclassified, expressed	IMGA|Medtr5g072460.1	Ubiquitin-activating enzyme E1 chr5 29824205-29811181 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02962	A	A1S	Potri.001G282300	Potri.001G282300(AS)	POPTR_0001s28910	sp|O64732|U87A1_ARATH	UDP-glycosyltransferase 87A1 OS=Arabidopsis thaliana GN=UGT87A1 PE=2 SV=1	AT2G30140.2	| Symbols: | UDP-Glycosyltransferase superfamily protein | chr2:12872200-12873691 FORWARD LENGTH=454	LOC_Os05g41400.1	protein|indole-3-acetate beta-glucosyltransferase, putative, expressed	IMGA|Medtr5g072860.1	Cytokinin-O-glucosyltransferase chr5 30009055-30010576 E EGN_Mt100125 20111014	GO:0009407|toxin catabolic process GO:0009627|systemic acquired resistance GO:0009909|regulation of flower development GO:0010583|response to cyclopentenone GO:0034976|response to endoplasmic reticulum stress	GO:0008194|UDP-glycosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol
pt2_02963	A	A2S	Potri.001G282400	Potri.001G282400(AS) Potri.001G282500(AA)	POPTR_0001s28920	sp|Q55DY8|MFRN_DICDI	Mitoferrin OS=Dictyostelium discoideum GN=mcfF PE=3 SV=1	AT1G07030.1	| Symbols: | Mitochondrial substrate carrier family protein | chr1:2158631-2160524 REVERSE LENGTH=326	LOC_Os03g18550.1	protein|mitochondrial carrier protein, putative, expressed	IMGA|Medtr5g073040.1	Solute carrier family 25 member chr5 30088501-30082642 E EGN_Mt100125 20111014	GO:0006810|transport GO:0006839|mitochondrial transport GO:0015824|proline transport GO:0055085|transmembrane transport	NA	GO:0005739|mitochondrion GO:0005743|mitochondrial inner membrane
pt2_02964	A	A2S	Potri.001G282500	Potri.001G282500(AS) Potri.001G282400(AA)	POPTR_0001s28930	sp|O64730|P2C26_ARATH	Probable protein phosphatase 2C 26 OS=Arabidopsis thaliana GN=At2g30170 PE=2 SV=2	AT2G30170.1	| Symbols: | Protein phosphatase 2C family protein | chr2:12879802-12881474 REVERSE LENGTH=298	LOC_Os01g07090.1	protein|5-azacytidine resistance protein azr1, putative, expressed	IMGA|Medtr5g019790.1	Mitochondrial catalytic protein chr5 7246834-7244365 F EGN_Mt100125 20111014	GO:0006364|rRNA processing GO:0009657|plastid organization GO:0010027|thylakoid membrane organization GO:0010155|regulation of proton transport GO:0010207|photosystem II assembly GO:0035970|peptidyl-threonine dephosphorylation GO:0046777|protein autophosphorylation GO:0071482|cellular response to light stimulus	GO:0003824|catalytic activity	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_02965	A	A1S	Potri.001G282500	Potri.001G282500(AS)	POPTR_0001s28930	sp|O64730|P2C26_ARATH	Probable protein phosphatase 2C 26 OS=Arabidopsis thaliana GN=At2g30170 PE=2 SV=2	AT2G30170.1	| Symbols: | Protein phosphatase 2C family protein | chr2:12879802-12881474 REVERSE LENGTH=298	LOC_Os01g07090.1	protein|5-azacytidine resistance protein azr1, putative, expressed	IMGA|Medtr5g019790.1	Mitochondrial catalytic protein chr5 7246834-7244365 F EGN_Mt100125 20111014	GO:0006364|rRNA processing GO:0009657|plastid organization GO:0010027|thylakoid membrane organization GO:0010155|regulation of proton transport GO:0010207|photosystem II assembly GO:0035970|peptidyl-threonine dephosphorylation GO:0046777|protein autophosphorylation GO:0071482|cellular response to light stimulus	GO:0003824|catalytic activity	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_02966	A	A1S	Potri.001G282500	Potri.001G282500(AS)	POPTR_0001s28930	sp|O64730|P2C26_ARATH	Probable protein phosphatase 2C 26 OS=Arabidopsis thaliana GN=At2g30170 PE=2 SV=2	AT2G30170.1	| Symbols: | Protein phosphatase 2C family protein | chr2:12879802-12881474 REVERSE LENGTH=298	LOC_Os01g07090.1	protein|5-azacytidine resistance protein azr1, putative, expressed	IMGA|Medtr5g019790.1	Mitochondrial catalytic protein chr5 7246834-7244365 F EGN_Mt100125 20111014	GO:0006364|rRNA processing GO:0009657|plastid organization GO:0010027|thylakoid membrane organization GO:0010155|regulation of proton transport GO:0010207|photosystem II assembly GO:0035970|peptidyl-threonine dephosphorylation GO:0046777|protein autophosphorylation GO:0071482|cellular response to light stimulus	GO:0003824|catalytic activity	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_02967	C	C1S	Potri.001G282600	Potri.001G282600(CS)	sp|Q8R3F5|FABD_MOUSE	Malonyl-CoA-acyl carrier protein transacylase, mitochondrial OS=Mus musculus GN=Mcat PE=2 SV=3	AT2G30200.1	| Symbols: | catalytics;transferases;[acyl-carrier-protein] S-malonyltransferases;binding | chr2:12883162-12885482 REVERSE LENGTH=393	LOC_Os03g18590.1	protein|malonyl CoA-acyl carrier protein transacylase, mitochondrial precursor, putative, expressed	NA	NA	GO:0006744|ubiquinone biosynthetic process GO:0008152|metabolic process	GO:0003824|catalytic activity GO:0004314|[acyl-carrier-protein] S-malonyltransferase activity GO:0016740|transferase activity	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_02968	A	A1S	Potri.001G282700	Potri.001G282700(AS)	POPTR_0001s28950	NA	NA	AT1G07010.1	| Symbols: | Calcineurin-like metallo-phosphoesterase superfamily protein | chr1:2152949-2154968 FORWARD LENGTH=389	LOC_Os10g25430.1	protein|Ser/Thr protein phosphatase family protein, putative, expressed	IMGA|Medtr5g072900.1	Pectinesterase chr5 30027858-30032164 E EGN_Mt100125 20111014	GO:0010264|myo-inositol hexakisphosphate biosynthetic process	GO:0004722|protein serine/threonine phosphatase activity GO:0016787|hydrolase activity	GO:0005777|peroxisome GO:0009507|chloroplast
pt2_02969	A	A1S	Potri.001G282800	Potri.001G282800(AS)	POPTR_0001s28960	sp|Q1HDT2|CHX24_ARATH	Cation/H(+) antiporter 24 OS=Arabidopsis thaliana GN=CHX24 PE=2 SV=2	AT5G37060.1	| Symbols: ATCHX24, CHX24 | cation/H+ exchanger 24 | chr5:14642741-14645414 REVERSE LENGTH=859	LOC_Os05g40650.1	protein|ATCHX, putative, expressed	IMGA|Medtr5g074360.1	Cation proton exchanger chr5 30596399-30593017 H EGN_Mt100125 20111014	GO:0006812|cation transport GO:0006814|sodium ion transport GO:0009827|plant-type cell wall modification GO:0009860|pollen tube growth GO:0010351|lithium ion transport GO:0035725|sodium ion transmembrane transport GO:0055085|transmembrane transport	GO:0005451|monovalent cation:hydrogen antiporter activity GO:0015299|solute:hydrogen antiporter activity GO:0015385|sodium:hydrogen antiporter activity	GO:0016021|integral to membrane
pt2_02970	A	A2S	Potri.001G282900	Potri.001G282900(AS) Potri.009G078100(DS)	POPTR_0001s28970	NA	NA	AT5G09570.1	| Symbols: | Cox19-like CHCH family protein | chr5:2970733-2971970 FORWARD LENGTH=139	LOC_Os03g48080.1	protein|CHCH domain containing protein, expressed	NA	NA	GO:0008150|biological_process GO:0016036|cellular response to phosphate starvation GO:0019375|galactolipid biosynthetic process GO:0045892|negative regulation of transcription, DNA-dependent	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_02971	G	G1	NA	NA	POPTR_0001s28980	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02972	A	A1S	Potri.001G283100	Potri.001G283100(AS)	POPTR_0001s28990	sp|Q0WM29|MMSA_ARATH	Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Arabidopsis thaliana GN=ALDH6B2 PE=2 SV=2	AT2G14170.1	| Symbols: ALDH6B2 | aldehyde dehydrogenase 6B2 | chr2:5977727-5981899 REVERSE LENGTH=607	LOC_Os07g09060.1	protein|aldehyde dehydrogenase, putative, expressed	IMGA|Medtr1g014320.1	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase chr1 3773177-3769070 E EGN_Mt100125 20111014	GO:0006979|response to oxidative stress GO:0008152|metabolic process GO:0015996|chlorophyll catabolic process GO:0055114|oxidation-reduction process	GO:0004028|3-chloroallyl aldehyde dehydrogenase activity GO:0004491|methylmalonate-semialdehyde dehydrogenase (acylating) activity GO:0005507|copper ion binding GO:0016491|oxidoreductase activity	GO:0005737|cytoplasm GO:0005739|mitochondrion
pt2_02973	A	A1S	Potri.001G283100	Potri.001G283100(AS)	POPTR_0001s28990	sp|Q0WM29|MMSA_ARATH	Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Arabidopsis thaliana GN=ALDH6B2 PE=2 SV=2	AT2G14170.1	| Symbols: ALDH6B2 | aldehyde dehydrogenase 6B2 | chr2:5977727-5981899 REVERSE LENGTH=607	LOC_Os07g09060.1	protein|aldehyde dehydrogenase, putative, expressed	IMGA|Medtr1g014320.1	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase chr1 3773177-3769070 E EGN_Mt100125 20111014	GO:0006979|response to oxidative stress GO:0008152|metabolic process GO:0015996|chlorophyll catabolic process GO:0055114|oxidation-reduction process	GO:0004028|3-chloroallyl aldehyde dehydrogenase activity GO:0004491|methylmalonate-semialdehyde dehydrogenase (acylating) activity GO:0005507|copper ion binding GO:0016491|oxidoreductase activity	GO:0005737|cytoplasm GO:0005739|mitochondrion
pt2_02974	A	A4S	Potri.001G283200	Potri.001G283200(AS) Potri.001G283700(BS) Potri.001G283500(BS) Potri.001G283400(BS)	POPTR_0001s29000	sp|Q9LXA5|LRK91_ARATH	L-type lectin-domain containing receptor kinase IX.1 OS=Arabidopsis thaliana GN=LECRK91 PE=2 SV=1	AT5G10530.1	| Symbols: | Concanavalin A-like lectin protein kinase family protein | chr5:3324978-3326933 REVERSE LENGTH=651	LOC_Os08g03240.1	protein|lectin-like receptor kinase 1, putative, expressed	IMGA|Medtr5g077100.1	Lectin receptor kinase-like protein chr5 31903098-31900697 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_02975	B	B1S	Potri.001G283300	Potri.001G283300(BS)	POPTR_0001s29010	sp|Q0WM29|MMSA_ARATH	Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Arabidopsis thaliana GN=ALDH6B2 PE=2 SV=2	AT2G14170.3	| Symbols: ALDH6B2 | aldehyde dehydrogenase 6B2 | chr2:5977851-5981899 REVERSE LENGTH=595	LOC_Os07g09060.2	protein|aldehyde dehydrogenase, putative, expressed	IMGA|Medtr1g014320.1	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase chr1 3773177-3769070 E EGN_Mt100125 20111014	GO:0006979|response to oxidative stress GO:0008152|metabolic process GO:0015996|chlorophyll catabolic process GO:0055114|oxidation-reduction process	GO:0004028|3-chloroallyl aldehyde dehydrogenase activity GO:0004491|methylmalonate-semialdehyde dehydrogenase (acylating) activity GO:0005507|copper ion binding GO:0016491|oxidoreductase activity	GO:0005737|cytoplasm GO:0005739|mitochondrion
pt2_02976	A	A1S	Potri.001G283300	Potri.001G283300(AS)	POPTR_0001s29010	sp|Q0WM29|MMSA_ARATH	Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Arabidopsis thaliana GN=ALDH6B2 PE=2 SV=2	AT2G14170.3	| Symbols: ALDH6B2 | aldehyde dehydrogenase 6B2 | chr2:5977851-5981899 REVERSE LENGTH=595	LOC_Os07g09060.2	protein|aldehyde dehydrogenase, putative, expressed	IMGA|Medtr1g014320.1	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase chr1 3773177-3769070 E EGN_Mt100125 20111014	GO:0006979|response to oxidative stress GO:0008152|metabolic process GO:0015996|chlorophyll catabolic process GO:0055114|oxidation-reduction process	GO:0004028|3-chloroallyl aldehyde dehydrogenase activity GO:0004491|methylmalonate-semialdehyde dehydrogenase (acylating) activity GO:0005507|copper ion binding GO:0016491|oxidoreductase activity	GO:0005737|cytoplasm GO:0005739|mitochondrion
pt2_02977	C	C1S	Potri.001G283500	Potri.001G283500(CS)	sp|Q9LXA5|LRK91_ARATH	L-type lectin-domain containing receptor kinase IX.1 OS=Arabidopsis thaliana GN=LECRK91 PE=2 SV=1	AT5G10530.1	| Symbols: | Concanavalin A-like lectin protein kinase family protein | chr5:3324978-3326933 REVERSE LENGTH=651	LOC_Os01g57100.1	protein|expressed protein	IMGA|Medtr5g095970.1	Lectin-domain containing receptor kinase A4.3 chr5 40923615-40925660 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_02978	A	A1S	Potri.001G283600	Potri.001G283600(AS)	POPTR_0001s29030	sp|Q91DM0|POLG_PVCV1	Genome polyprotein OS=Petunia vein clearing virus (isolate Shepherd) PE=3 SV=1	AT1G37113.1	| Symbols: | unknown protein; LOCATED IN: chloroplast; Has 24 Blast hits to 24 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 14; Viruses - 6; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:14136413-14138245 FORWARD LENGTH=414	NA	NA	NA	NA	NA	NA	GO:0005634|nucleus
pt2_02979	A	A4S	Potri.001G283700	Potri.001G283700(AS) Potri.001G283200(BS) Potri.001G284200(BS) Potri.001G283400(BS)	POPTR_0001s29050	sp|Q9LXA5|LRK91_ARATH	L-type lectin-domain containing receptor kinase IX.1 OS=Arabidopsis thaliana GN=LECRK91 PE=2 SV=1	AT5G10530.1	| Symbols: | Concanavalin A-like lectin protein kinase family protein | chr5:3324978-3326933 REVERSE LENGTH=651	LOC_Os12g41530.1	protein|cysteine-rich receptor-like protein kinase 8 precursor, putative, expressed	IMGA|Medtr5g025020.1	Lectin-domain containing receptor kinase A4.2 chr5 9874453-9867404 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_02980	G	G2	NA	NA	POPTR_0001s29060	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02981	A	A2S	Potri.001G283800	Potri.001G283800(AS) Potri.001G284100(DS)	POPTR_0001s29070	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02982	A	A4S	Potri.001G283200	Potri.001G283200(AS) Potri.001G283700(AS) Potri.001G284200(BS) Potri.001G283400(BS)	POPTR_0001s29080	sp|Q9LXA5|LRK91_ARATH	L-type lectin-domain containing receptor kinase IX.1 OS=Arabidopsis thaliana GN=LECRK91 PE=2 SV=1	AT5G10530.1	| Symbols: | Concanavalin A-like lectin protein kinase family protein | chr5:3324978-3326933 REVERSE LENGTH=651	LOC_Os08g03240.1	protein|lectin-like receptor kinase 1, putative, expressed	IMGA|Medtr5g077100.1	Lectin receptor kinase-like protein chr5 31903098-31900697 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_02983	A	A5S	Potri.001G283200	Potri.001G283200(AS) Potri.001G283700(AS) Potri.001G284200(BS) Potri.001G283500(BS) Potri.001G283400(BS)	POPTR_0001s29080	sp|Q9LXA5|LRK91_ARATH	L-type lectin-domain containing receptor kinase IX.1 OS=Arabidopsis thaliana GN=LECRK91 PE=2 SV=1	AT5G10530.1	| Symbols: | Concanavalin A-like lectin protein kinase family protein | chr5:3324978-3326933 REVERSE LENGTH=651	LOC_Os08g03240.1	protein|lectin-like receptor kinase 1, putative, expressed	IMGA|Medtr5g077100.1	Lectin receptor kinase-like protein chr5 31903098-31900697 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_02984	B	B4S	Potri.001G283200	Potri.001G283200(BS) Potri.001G283700(BS) Potri.001G284200(BS) Potri.001G283400(BS)	POPTR_0001s29090	sp|Q9LXA5|LRK91_ARATH	L-type lectin-domain containing receptor kinase IX.1 OS=Arabidopsis thaliana GN=LECRK91 PE=2 SV=1	AT5G10530.1	| Symbols: | Concanavalin A-like lectin protein kinase family protein | chr5:3324978-3326933 REVERSE LENGTH=651	LOC_Os08g03240.1	protein|lectin-like receptor kinase 1, putative, expressed	IMGA|Medtr5g077100.1	Lectin receptor kinase-like protein chr5 31903098-31900697 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_02985	C	C1S	Potri.001G284300	Potri.001G284300(CS)	sp|Q9SI38|ANR1_ARATH	MADS-box transcription factor ANR1 OS=Arabidopsis thaliana GN=ANR1 PE=1 SV=1	AT2G14210.1	| Symbols: ANR1, AGL44 | AGAMOUS-like 44 | chr2:6018841-6023585 FORWARD LENGTH=234	LOC_Os04g38770.1	protein|OsMADS61 - MADS-box family gene with MIKCc type-box, expressed	IMGA|Medtr5g066960.1	MADS-box transcription factor-like protein chr5 27287720-27296086 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006944|cellular membrane fusion GO:0007155|cell adhesion GO:0007584|response to nutrient GO:0009556|microsporogenesis GO:0009887|organ morphogenesis GO:0009888|tissue development GO:0010090|trichome morphogenesis GO:0010167|response to nitrate GO:0010413|glucuronoxylan metabolic process GO:0010638|positive regulation of organelle organization GO:0033044|regulation of chromosome organization GO:0044036|cell wall macromolecule metabolic process GO:0045010|actin nucleation GO:0045492|xylan biosynthetic process GO:0048527|lateral root development GO:0048589|developmental growth GO:0048765|root hair cell differentiation GO:0052543|callose deposition in cell wall GO:0071249|cellular response to nitrate GO:0071555|cell wall organization	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008134|transcription factor binding GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_02986	R	R	NA	NA	POPTR_0001s29110	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02987	G	G2	NA	NA	POPTR_0001s29120	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02988	A	A1S	Potri.001G284700	Potri.001G284700(AS)	POPTR_0001s29130	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02989	G	G2	NA	NA	POPTR_0001s29135	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02990	C	C1S	Potri.001G284900	Potri.001G284900(CS)	NA	NA	AT5G28950.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 448 Blast hits to 446 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 21; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:10992505-10993435 FORWARD LENGTH=148	LOC_Os05g28600.1	protein|transposon protein, putative, CACTA, En/Spm sub-class	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_02991	G	G2	NA	NA	POPTR_0001s29150	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02992	A	A1S	Potri.001G285000	Potri.001G285000(AS)	POPTR_0001s29160	NA	NA	AT5G09580.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53345.1); Has 53 Blast hits to 53 proteins in 12 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | chr5:2972639-2974438 FORWARD LENGTH=393	LOC_Os11g06670.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_02993	A	A1S	Potri.001G285100	Potri.001G285100(AS)	POPTR_0001s29170	sp|Q08276|HSP7M_SOLTU	Heat shock 70 kDa protein, mitochondrial OS=Solanum tuberosum GN=HSP68 PE=2 SV=1	AT5G09590.1	| Symbols: MTHSC70-2, HSC70-5 | mitochondrial HSO70 2 | chr5:2975721-2978508 FORWARD LENGTH=682	LOC_Os02g53420.1	protein|DnaK family protein, putative, expressed	NA	NA	GO:0006121|mitochondrial electron transport, succinate to ubiquinone	GO:0000104|succinate dehydrogenase activity GO:0016627|oxidoreductase activity, acting on the CH-CH group of donors	GO:0005739|mitochondrion GO:0005749|mitochondrial respiratory chain complex II GO:0005886|plasma membrane GO:0016020|membrane
pt2_02994	C	C1S	Potri.001G285200	Potri.001G285200(CS)	NA	NA	NA	NA	NA	NA	NA	NA	GO:0009231|riboflavin biosynthetic process	GO:0003919|FMN adenylyltransferase activity	GO:0005634|nucleus
pt2_02995	A	A1S	Potri.001G285300	Potri.001G285300(AS)	POPTR_0001s29190	NA	NA	AT2G04305.1	| Symbols: | Magnesium transporter CorA-like family protein | chr2:1501679-1503448 REVERSE LENGTH=434	LOC_Os08g03600.1	protein|expressed protein	NA	NA	GO:0006944|cellular membrane fusion GO:0009697|salicylic acid biosynthetic process GO:0009863|salicylic acid mediated signaling pathway GO:0030001|metal ion transport GO:0030968|endoplasmic reticulum unfolded protein response GO:0031348|negative regulation of defense response GO:0045087|innate immune response GO:0055085|transmembrane transport	GO:0046873|metal ion transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_02996	A	A1S	Potri.001G285400	Potri.001G285400(AS)	POPTR_0001s29200	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_02997	A	A1S	Potri.001G285500	Potri.001G285500(AS)	POPTR_0001s29210	sp|Q01899|HSP7M_PHAVU	Heat shock 70 kDa protein, mitochondrial OS=Phaseolus vulgaris PE=2 SV=1	AT5G09590.1	| Symbols: MTHSC70-2, HSC70-5 | mitochondrial HSO70 2 | chr5:2975721-2978508 FORWARD LENGTH=682	LOC_Os02g53420.1	protein|DnaK family protein, putative, expressed	IMGA|Medtr5g066800.1	Heat shock protein chr5 27240729-27238467 H EGN_Mt100125 20111014	GO:0006457|protein folding GO:0009408|response to heat GO:0009615|response to virus GO:0009644|response to high light intensity GO:0009651|response to salt stress GO:0019243|methylglyoxal catabolic process to D-lactate GO:0034976|response to endoplasmic reticulum stress GO:0042542|response to hydrogen peroxide GO:0046686|response to cadmium ion	GO:0005524|ATP binding GO:0051082|unfolded protein binding	GO:0005618|cell wall GO:0005739|mitochondrion GO:0005759|mitochondrial matrix GO:0005774|vacuolar membrane GO:0009507|chloroplast
pt2_02998	A	A1S	Potri.001G285600	Potri.001G285600(AS)	POPTR_0001s29220	sp|O60094|DPO5_SCHPO	DNA polymerase V OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pol5 PE=1 SV=2	AT5G64420.1	| Symbols: | DNA polymerase V family | chr5:25756416-25761122 FORWARD LENGTH=1306	LOC_Os02g04270.1	protein|DNA polymerase V, putative, expressed	NA	NA	GO:0006260|DNA replication GO:0006351|transcription, DNA-dependent GO:0009165|nucleotide biosynthetic process	GO:0003677|DNA binding GO:0003887|DNA-directed DNA polymerase activity	GO:0005634|nucleus GO:0005829|cytosol
pt2_02999	A	A2S	Potri.001G285700	Potri.001G285700(AS) Potri.009G080000(DS)	POPTR_0001s29230	sp|Q9S7T1|GTE3_ARATH	Transcription factor GTE3, chloroplastic OS=Arabidopsis thaliana GN=GTE3 PE=1 SV=1	AT1G73150.1	| Symbols: GTE3 | global transcription factor group E3 | chr1:27504327-27505996 REVERSE LENGTH=461	LOC_Os01g11580.1	protein|bromodomain containing protein, expressed	IMGA|contig_166847_1.1	Bromodomain protein-like protein contig_166847 889-2214 H PREDN 20111014	NA	GO:0003677|DNA binding GO:0005515|protein binding GO:0042393|histone binding	GO:0005634|nucleus
pt2_03000	A	A1S	Potri.001G285700	Potri.001G285700(AS)	POPTR_0001s29240	sp|Q9S7T1|GTE3_ARATH	Transcription factor GTE3, chloroplastic OS=Arabidopsis thaliana GN=GTE3 PE=1 SV=1	AT1G73150.1	| Symbols: GTE3 | global transcription factor group E3 | chr1:27504327-27505996 REVERSE LENGTH=461	LOC_Os01g11580.1	protein|bromodomain containing protein, expressed	IMGA|contig_166847_1.1	Bromodomain protein-like protein contig_166847 889-2214 H PREDN 20111014	NA	GO:0003677|DNA binding GO:0005515|protein binding GO:0042393|histone binding	GO:0005634|nucleus
pt2_03001	B	B1S	Potri.001G285800	Potri.001G285800(BS)	POPTR_0001s29250	NA	NA	AT5G64430.1	| Symbols: | Octicosapeptide/Phox/Bem1p family protein | chr5:25762540-25764081 REVERSE LENGTH=513	LOC_Os07g37040.1	protein|PB1 domain containing protein, expressed	IMGA|Medtr5g067160.1	PB1 domain-containing protein chr5 27402649-27396623 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0009941|chloroplast envelope
pt2_03002	A	A1S	Potri.001G285900	Potri.001G285900(AS)	POPTR_0001s29260	sp|Q7XJJ7|FAAH_ARATH	Fatty acid amide hydrolase OS=Arabidopsis thaliana GN=FAAH PE=1 SV=1	AT5G64440.1	| Symbols: AtFAAH, FAAH | fatty acid amide hydrolase | chr5:25766229-25770260 FORWARD LENGTH=607	LOC_Os04g01250.2	protein|amidase family protein, putative, expressed	NA	NA	GO:0042742|defense response to bacterium GO:0070291|N-acylethanolamine metabolic process	GO:0004040|amidase activity GO:0016884|carbon-nitrogen ligase activity, with glutamine as amido-N-donor GO:0047412|N-(long-chain-acyl)ethanolamine deacylase activity	GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005783|endoplasmic reticulum GO:0005794|Golgi apparatus GO:0005886|plasma membrane
pt2_03003	A	A1S	Potri.001G286000	Potri.001G286000(AS)	POPTR_0001s29270	NA	NA	AT5G64460.8	| Symbols: | Phosphoglycerate mutase family protein | chr5:25773009-25775104 REVERSE LENGTH=282	LOC_Os04g01230.2	protein|phosphoglycerate mutase, putative, expressed	IMGA|Medtr5g067240.1	Phosphoglycerate mutase-like protein chr5 27433579-27427129 F EGN_Mt100125 20111014	GO:0008150|biological_process GO:0009736|cytokinin mediated signaling pathway	GO:0003674|molecular_function	GO:0005829|cytosol
pt2_03004	A	A1S	Potri.001G286100	Potri.001G286100(AS)	POPTR_0001s29280	NA	NA	AT5G64470.2	| Symbols: | Plant protein of unknown function (DUF828) | chr5:25776026-25777716 FORWARD LENGTH=407	LOC_Os02g02580.1	protein|expressed protein	IMGA|contig_59644_1.1	Unknown protein contig_59644 197-4759 E PREDN 20111014	GO:0008150|biological_process	NA	GO:0009507|chloroplast
pt2_03005	A	A1S	Potri.001G286200	Potri.001G286200(AS)	POPTR_0001s29290	NA	NA	AT5G64480.1	| Symbols: | unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr5:25778202-25778756 FORWARD LENGTH=184	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_03006	A	A1S	Potri.001G286300	Potri.001G286300(AS)	POPTR_0001s29300	sp|Q640V2|RMD5A_XENTR	Protein RMD5 homolog A OS=Xenopus tropicalis GN=rmnd5a PE=2 SV=1	AT5G09630.1	| Symbols: | LisH/CRA/RING-U-box domains-containing protein | chr5:2986016-2987176 REVERSE LENGTH=386	LOC_Os06g38940.2	protein|RMD5 homolog A, putative, expressed	IMGA|Medtr5g045140.1	LisH domain-containing protein chr5 19372898-19373589 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0008270|zinc ion binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03007	A	A1S	Potri.001G286400	Potri.001G286400(AS)	POPTR_0001s29310	sp|P93111|HEM11_CUCSA	Glutamyl-tRNA reductase 1, chloroplastic OS=Cucumis sativus GN=HEMA1 PE=2 SV=1	AT1G58290.1	| Symbols: HEMA1 | Glutamyl-tRNA reductase family protein | chr1:21624028-21626051 REVERSE LENGTH=543	LOC_Os10g35840.1	protein|shikimate/quinate 5-dehydrogenase, putative, expressed	IMGA|Medtr5g067410.1	Glutamyl-tRNA reductase chr5 27498441-27495517 F EGN_Mt100125 20111014	GO:0000302|response to reactive oxygen species GO:0006779|porphyrin-containing compound biosynthetic process GO:0006783|heme biosynthetic process GO:0009416|response to light stimulus GO:0010039|response to iron ion GO:0015995|chlorophyll biosynthetic process GO:0033014|tetrapyrrole biosynthetic process GO:0055072|iron ion homeostasis GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0005515|protein binding GO:0008883|glutamyl-tRNA reductase activity GO:0050661|NADP binding	GO:0009507|chloroplast
pt2_03008	A	A1S	Potri.001G286500	Potri.001G286500(AS)	POPTR_0001s29320	sp|Q9C5C8|MSRB2_ARATH	Peptide methionine sulfoxide reductase B2, chloroplastic OS=Arabidopsis thaliana GN=MSRB2 PE=1 SV=1	AT4G21860.3	| Symbols: MSRB2 | methionine sulfoxide reductase B 2 | chr4:11600238-11601507 REVERSE LENGTH=202	LOC_Os05g33510.1	protein|peptide methionine sulfoxide reductase msrB, putative, expressed	NA	NA	GO:0006979|response to oxidative stress GO:0055114|oxidation-reduction process	GO:0008113|peptide-methionine (S)-S-oxide reductase activity GO:0033743|peptide-methionine (R)-S-oxide reductase activity	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_03009	A	A1S	Potri.001G286500	Potri.001G286500(AS)	POPTR_0001s29320	sp|Q9C5C8|MSRB2_ARATH	Peptide methionine sulfoxide reductase B2, chloroplastic OS=Arabidopsis thaliana GN=MSRB2 PE=1 SV=1	AT4G21860.3	| Symbols: MSRB2 | methionine sulfoxide reductase B 2 | chr4:11600238-11601507 REVERSE LENGTH=202	LOC_Os05g33510.1	protein|peptide methionine sulfoxide reductase msrB, putative, expressed	NA	NA	GO:0006979|response to oxidative stress GO:0055114|oxidation-reduction process	GO:0008113|peptide-methionine (S)-S-oxide reductase activity GO:0033743|peptide-methionine (R)-S-oxide reductase activity	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_03010	A	A1S	Potri.001G286500	Potri.001G286500(AS)	POPTR_0001s29320	sp|Q9C5C8|MSRB2_ARATH	Peptide methionine sulfoxide reductase B2, chloroplastic OS=Arabidopsis thaliana GN=MSRB2 PE=1 SV=1	AT4G21860.3	| Symbols: MSRB2 | methionine sulfoxide reductase B 2 | chr4:11600238-11601507 REVERSE LENGTH=202	LOC_Os05g33510.1	protein|peptide methionine sulfoxide reductase msrB, putative, expressed	NA	NA	GO:0006979|response to oxidative stress GO:0055114|oxidation-reduction process	GO:0008113|peptide-methionine (S)-S-oxide reductase activity GO:0033743|peptide-methionine (R)-S-oxide reductase activity	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_03011	A	A1S	Potri.001G286600	Potri.001G286600(AS)	POPTR_0001s29340	sp|Q9FLG8|SPNS2_ARATH	Probable sphingolipid transporter spinster homolog 2 OS=Arabidopsis thaliana GN=At5g64500 PE=2 SV=1	AT5G64500.1	| Symbols: | Major facilitator superfamily protein | chr5:25780511-25783474 FORWARD LENGTH=484	LOC_Os04g44430.1	protein|transporter, major facilitator family, putative, expressed	IMGA|Medtr5g030580.1	Spinster-like protein chr5 12613928-12604363 E EGN_Mt100125 20111014	GO:0006635|fatty acid beta-oxidation GO:0016126|sterol biosynthetic process GO:0016558|protein import into peroxisome matrix GO:0046520|sphingoid biosynthetic process GO:0055085|transmembrane transport	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0016020|membrane
pt2_03012	A	A1S	Potri.001G286600	Potri.001G286600(AS)	POPTR_0001s29340	sp|Q9FLG8|SPNS2_ARATH	Probable sphingolipid transporter spinster homolog 2 OS=Arabidopsis thaliana GN=At5g64500 PE=2 SV=1	AT5G64500.1	| Symbols: | Major facilitator superfamily protein | chr5:25780511-25783474 FORWARD LENGTH=484	LOC_Os04g44430.1	protein|transporter, major facilitator family, putative, expressed	IMGA|Medtr5g030580.1	Spinster-like protein chr5 12613928-12604363 E EGN_Mt100125 20111014	GO:0006635|fatty acid beta-oxidation GO:0016126|sterol biosynthetic process GO:0016558|protein import into peroxisome matrix GO:0046520|sphingoid biosynthetic process GO:0055085|transmembrane transport	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0016020|membrane
pt2_03013	A	A2S	Potri.001G286700	Potri.001G286700(AS) Potri.006G002800(BS)	POPTR_0001s29350	sp|Q0J4P2|HSP81_ORYSJ	Heat shock protein 81-1 OS=Oryza sativa subsp. japonica GN=HSP81-1 PE=2 SV=2	AT5G56000.1	| Symbols: Hsp81.4, AtHsp90.4 | HEAT SHOCK PROTEIN 81.4 | chr5:22677602-22680067 REVERSE LENGTH=699	LOC_Os08g39140.1	protein|heat shock protein, putative, expressed	IMGA|Medtr5g096430.1	Heat shock protein chr5 41129100-41125832 F EGN_Mt100125 20111014	GO:0006457|protein folding GO:0006950|response to stress GO:0006952|defense response GO:0009408|response to heat GO:0009414|response to water deprivation GO:0009612|response to mechanical stimulus GO:0009651|response to salt stress GO:0009816|defense response to bacterium, incompatible interaction GO:0009908|flower development GO:0010187|negative regulation of seed germination GO:0010286|heat acclimation GO:0019722|calcium-mediated signaling GO:0048366|leaf development GO:0050821|protein stabilization	GO:0005515|protein binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0051082|unfolded protein binding	GO:0005618|cell wall GO:0005634|nucleus GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0005829|cytosol GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0009570|chloroplast stroma GO:0048046|apoplast
pt2_03014	A	A1S	Potri.001G286800	Potri.001G286800(AS)	POPTR_0001s29360	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03015	A	A2S	Potri.001G286900	Potri.001G286900(AS) Potri.009G081200(DS)	POPTR_0001s29370	sp|Q9LXC9|IPYR1_ARATH	Soluble inorganic pyrophosphatase 1, chloroplastic OS=Arabidopsis thaliana GN=PPA1 PE=1 SV=1	AT5G09650.1	| Symbols: AtPPa6, PPa6 | pyrophosphorylase 6 | chr5:2991331-2993117 REVERSE LENGTH=300	LOC_Os02g52940.2	protein|soluble inorganic pyrophosphatase, putative, expressed	IMGA|Medtr1g068810.2	Soluble inorganic pyrophosphatase chr1 17097936-17101097 F EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0002831|regulation of response to biotic stimulus GO:0006612|protein targeting to membrane GO:0006796|phosphate-containing compound metabolic process GO:0008152|metabolic process GO:0009409|response to cold GO:0009595|detection of biotic stimulus GO:0009651|response to salt stress GO:0009684|indoleacetic acid biosynthetic process GO:0009697|salicylic acid biosynthetic process GO:0009814|defense response, incompatible interaction GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0019344|cysteine biosynthetic process GO:0019684|photosynthesis, light reaction GO:0019761|glucosinolate biosynthetic process GO:0031348|negative regulation of defense response GO:0042742|defense response to bacterium GO:0043900|regulation of multi-organism process GO:0046686|response to cadmium ion GO:0050832|defense response to fungus	GO:0000287|magnesium ion binding GO:0004427|inorganic diphosphatase activity GO:0016462|pyrophosphatase activity	GO:0009507|chloroplast GO:0009536|plastid GO:0009570|chloroplast stroma GO:0009579|thylakoid GO:0009941|chloroplast envelope GO:0016020|membrane GO:0044434|chloroplast part
pt2_03016	A	A1S	Potri.001G287000	Potri.001G287000(AS)	POPTR_0001s29380	sp|Q3EC11|ZDHC2_ARATH	Probable S-acyltransferase At2g14255 OS=Arabidopsis thaliana GN=At2g14255 PE=2 SV=2	AT2G14255.1	| Symbols: | Ankyrin repeat family protein with DHHC zinc finger domain | chr2:6036974-6040892 FORWARD LENGTH=536	LOC_Os11g34860.1	protein|palmitoyltransferase TIP1, putative, expressed	IMGA|Medtr1g098390.1	Palmitoyltransferase SWF1 chr1 28233746-28237541 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0008270|zinc ion binding	GO:0005794|Golgi apparatus GO:0016020|membrane
pt2_03017	A	A1S	Potri.001G287100	Potri.001G287100(AS)	POPTR_0001s29390	sp|Q52472|FCDH_PSESP	D-threo-aldose 1-dehydrogenase OS=Pseudomonas sp. GN=fdh PE=1 SV=1	AT4G33670.1	| Symbols: | NAD(P)-linked oxidoreductase superfamily protein | chr4:16169670-16171446 REVERSE LENGTH=319	LOC_Os12g29760.1	protein|oxidoreductase, aldo/keto reductase family protein, putative, expressed	NA	NA	GO:0019853|L-ascorbic acid biosynthetic process	GO:0004033|aldo-keto reductase (NADP) activity GO:0010349|L-galactose dehydrogenase activity	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_03018	A	A2S	Potri.001G287200	Potri.001G287200(AS) Potri.009G081400(DS)	POPTR_0001s29400	sp|Q9T072|BH025_ARATH	Transcription factor bHLH25 OS=Arabidopsis thaliana GN=BHLH25 PE=2 SV=2	AT4G37850.1	| Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr4:17796362-17797647 REVERSE LENGTH=328	LOC_Os03g51580.1	protein|helix-loop-helix DNA-binding domain containing protein, expressed	IMGA|Medtr5g014520.1	BHLH transcription factor chr5 4634502-4638818 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_03019	A	A1S	Potri.001G287300	Potri.001G287300(AS)	POPTR_0001s29410	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03020	A	A2S	Potri.001G287400	Potri.001G287400(AS) Potri.009G081600(DS)	POPTR_0001s29420	sp|P19446|MDHG_CITLA	Malate dehydrogenase, glyoxysomal OS=Citrullus lanatus PE=1 SV=1	AT2G22780.1	| Symbols: PMDH1 | peroxisomal NAD-malate dehydrogenase 1 | chr2:9689995-9691923 REVERSE LENGTH=354	LOC_Os12g43630.1	protein|lactate/malate dehydrogenase, putative, expressed	IMGA|Medtr5g014710.1	"Malate dehydrogenase, glyoxysomal" chr5 4735187-4730913 F EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0006108|malate metabolic process GO:0006635|fatty acid beta-oxidation GO:0007031|peroxisome organization GO:0009062|fatty acid catabolic process GO:0031998|regulation of fatty acid beta-oxidation GO:0044262|cellular carbohydrate metabolic process GO:0055114|oxidation-reduction process GO:0080093|regulation of photorespiration	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0016491|oxidoreductase activity GO:0016615|malate dehydrogenase activity GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0030060|L-malate dehydrogenase activity	GO:0005737|cytoplasm GO:0005777|peroxisome GO:0009507|chloroplast
pt2_03021	A	A1S	Potri.001G287500	Potri.001G287500(AS)	POPTR_0001s29430	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03022	C	C1S	Potri.001G287600	Potri.001G287600(CS)	sp|Q9NX01|TXN4B_HUMAN	Thioredoxin-like protein 4B OS=Homo sapiens GN=TXNL4B PE=1 SV=1	AT3G24730.1	| Symbols: | mRNA splicing factor, thioredoxin-like U5 snRNP | chr3:9030152-9030894 REVERSE LENGTH=159	LOC_Os11g19220.1	protein|mitosis protein dim1, putative, expressed	IMGA|Medtr1g045900.1	Thioredoxin-like 4A chr1 13764378-13761949 F EGN_Mt100125 20111014	GO:0007067|mitosis	GO:0003824|catalytic activity	GO:0005634|nucleus GO:0005681|spliceosomal complex
pt2_03023	B	B1S	Potri.001G287600	Potri.001G287600(BS)	POPTR_0001s29450	sp|Q9NX01|TXN4B_HUMAN	Thioredoxin-like protein 4B OS=Homo sapiens GN=TXNL4B PE=1 SV=1	AT3G24730.1	| Symbols: | mRNA splicing factor, thioredoxin-like U5 snRNP | chr3:9030152-9030894 REVERSE LENGTH=159	LOC_Os11g19220.1	protein|mitosis protein dim1, putative, expressed	IMGA|Medtr1g045900.1	Thioredoxin-like 4A chr1 13764378-13761949 F EGN_Mt100125 20111014	GO:0007067|mitosis	GO:0003824|catalytic activity	GO:0005634|nucleus GO:0005681|spliceosomal complex
pt2_03024	A	A1S	Potri.001G287700	Potri.001G287700(AS)	POPTR_0001s29460	sp|P93732|PIP_ARATH	Proline iminopeptidase OS=Arabidopsis thaliana GN=PIP PE=2 SV=3	AT2G14260.2	| Symbols: PIP | proline iminopeptidase | chr2:6041441-6043475 REVERSE LENGTH=329	LOC_Os05g43830.2	protein|hydrolase, alpha/beta fold family domain containing protein, expressed	NA	NA	GO:0006508|proteolysis	GO:0004177|aminopeptidase activity GO:0008233|peptidase activity	GO:0005737|cytoplasm GO:0005829|cytosol GO:0009507|chloroplast
pt2_03025	A	A1S	Potri.001G287800	Potri.001G287800(AS)	POPTR_0001s29470	NA	NA	AT4G17000.1	| Symbols: | unknown protein; Has 2862 Blast hits to 2331 proteins in 349 species: Archae - 6; Bacteria - 408; Metazoa - 833; Fungi - 223; Plants - 134; Viruses - 7; Other Eukaryotes - 1251 (source: NCBI BLink). | chr4:9567046-9569913 REVERSE LENGTH=674	LOC_Os03g56070.1	protein|expressed protein	NA	NA	GO:0000226|microtubule cytoskeleton organization GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03026	A	A1S	Potri.001G287900	Potri.001G287900(AS)	POPTR_0001s29480	NA	NA	AT4G33690.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: pollen tube; Has 543 Blast hits to 512 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 281; Fungi - 54; Plants - 72; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink). | chr4:16175198-16176137 FORWARD LENGTH=246	LOC_Os07g11290.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0005515|protein binding	GO:0009507|chloroplast
pt2_03027	A	A1S	Potri.001G288000	Potri.001G288000(AS)	POPTR_0001s29490	sp|Q9ZQR4|Y2452_ARATH	DUF21 domain-containing protein At2g14520 OS=Arabidopsis thaliana GN=CBSDUF3 PE=2 SV=2	AT2G14520.1	| Symbols: | CBS domain-containing protein with a domain of unknown function (DUF21) | chr2:6182362-6184648 REVERSE LENGTH=423	LOC_Os03g47120.1	protein|CBS domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005886|plasma membrane
pt2_03028	A	A1S	Potri.001G288100	Potri.001G288100(AS)	POPTR_0001s29500	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03029	A	A1S	Potri.001G288200	Potri.001G288200(AS)	POPTR_0001s29510	sp|Q9M2Y6|Y3972_ARATH	Uncharacterized protein At3g49720 OS=Arabidopsis thaliana GN=At3g49720 PE=1 SV=1	AT3G49720.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, Golgi apparatus, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65810.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:18440192-18441655 REVERSE LENGTH=261	LOC_Os01g05070.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005768|endosome GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0005886|plasma membrane GO:0009535|chloroplast thylakoid membrane GO:0016020|membrane
pt2_03030	A	A1S	Potri.001G288300	Potri.001G288300(AS)	POPTR_0001s29520	NA	NA	NA	NA	NA	NA	NA	NA	GO:0000096|sulfur amino acid metabolic process GO:0001560|regulation of cell growth by extracellular stimulus GO:0006098|pentose-phosphate shunt GO:0006520|cellular amino acid metabolic process GO:0006546|glycine catabolic process GO:0006569|tryptophan catabolic process GO:0006636|unsaturated fatty acid biosynthetic process GO:0006733|oxidoreduction coenzyme metabolic process GO:0006766|vitamin metabolic process GO:0008652|cellular amino acid biosynthetic process GO:0009058|biosynthetic process GO:0009072|aromatic amino acid family metabolic process GO:0009106|lipoate metabolic process GO:0009108|coenzyme biosynthetic process GO:0009117|nucleotide metabolic process GO:0009684|indoleacetic acid biosynthetic process GO:0009695|jasmonic acid biosynthetic process GO:0019252|starch biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019344|cysteine biosynthetic process GO:0019748|secondary metabolic process GO:0019760|glucosinolate metabolic process GO:0019761|glucosinolate biosynthetic process GO:0042218|1-aminocyclopropane-1-carboxylate biosynthetic process GO:0042742|defense response to bacterium GO:0044272|sulfur compound biosynthetic process GO:0048830|adventitious root development	GO:0003824|catalytic activity GO:0008483|transaminase activity GO:0016740|transferase activity GO:0016846|carbon-sulfur lyase activity GO:0016847|1-aminocyclopropane-1-carboxylate synthase activity GO:0030170|pyridoxal phosphate binding GO:0080108|S-alkylthiohydroximate lyase activity	GO:0005737|cytoplasm GO:0016020|membrane
pt2_03031	B	B3S	Potri.T131500	Potri.T131500(BS) Potri.T131400(DS) Potri.001G288400(DS)	POPTR_0001s29530	sp|P11670|PRB1_TOBAC	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1	AT2G14580.1	| Symbols: ATPRB1, PRB1 | basic pathogenesis-related protein 1 | chr2:6225703-6226188 REVERSE LENGTH=161	LOC_Os01g28450.1	protein|SCP-like extracellular protein, expressed	IMGA|Medtr5g018770.1	Sts14 protein chr5 6755746-6756507 F EGN_Mt100125 20111014	GO:0009723|response to ethylene stimulus GO:0009751|response to salicylic acid stimulus GO:0009753|response to jasmonic acid stimulus	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_03032	A	A2S	Potri.T131400	Potri.T131400(AS) Potri.001G288400(AS)	POPTR_0001s29540	sp|P33154|PR1_ARATH	Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1	AT2G14610.1	| Symbols: PR1, PR 1, ATPR1 | pathogenesis-related gene 1 | chr2:6241944-6242429 REVERSE LENGTH=161	LOC_Os01g28500.1	protein|SCP-like extracellular protein, expressed	IMGA|Medtr5g018770.1	Sts14 protein chr5 6755746-6756507 F EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0002831|regulation of response to biotic stimulus GO:0006612|protein targeting to membrane GO:0006952|defense response GO:0009595|detection of biotic stimulus GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process GO:0009753|response to jasmonic acid stimulus GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010200|response to chitin GO:0010266|response to vitamin B1 GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0031348|negative regulation of defense response GO:0034976|response to endoplasmic reticulum stress GO:0042742|defense response to bacterium GO:0043900|regulation of multi-organism process GO:0045088|regulation of innate immune response GO:0050832|defense response to fungus	GO:0003674|molecular_function	GO:0005576|extracellular region GO:0005618|cell wall
pt2_03033	A	A1S	Potri.001G288500	Potri.001G288500(AS)	POPTR_0001s29550	NA	NA	NA	NA	NA	NA	NA	NA	NA	GO:0004857|enzyme inhibitor activity GO:0030599|pectinesterase activity GO:0046910|pectinesterase inhibitor activity	GO:0005576|extracellular region GO:0005618|cell wall
pt2_03034	A	A1S	Potri.001G288600	Potri.001G288600(AS)	POPTR_0001s29560	sp|P33154|PR1_ARATH	Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1	AT2G14610.1	| Symbols: PR1, PR 1, ATPR1 | pathogenesis-related gene 1 | chr2:6241944-6242429 REVERSE LENGTH=161	LOC_Os10g11500.1	protein|SCP-like extracellular protein, expressed	IMGA|Medtr5g018770.1	Sts14 protein chr5 6755746-6756507 F EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0002831|regulation of response to biotic stimulus GO:0006612|protein targeting to membrane GO:0006952|defense response GO:0009595|detection of biotic stimulus GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process GO:0009753|response to jasmonic acid stimulus GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010200|response to chitin GO:0010266|response to vitamin B1 GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0031348|negative regulation of defense response GO:0034976|response to endoplasmic reticulum stress GO:0042742|defense response to bacterium GO:0043900|regulation of multi-organism process GO:0045088|regulation of innate immune response GO:0050832|defense response to fungus	GO:0003674|molecular_function	GO:0005576|extracellular region GO:0005618|cell wall
pt2_03035	A	A1S	Potri.001G288700	Potri.001G288700(AS)	POPTR_0001s29570	NA	NA	AT1G77180.2	| Symbols: SKIP | chromatin protein family | chr1:28999791-29001632 REVERSE LENGTH=613	LOC_Os02g52250.1	protein|SKIP/SNW domain containing protein, expressed	NA	NA	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0006499|N-terminal protein myristoylation GO:0008380|RNA splicing GO:0009651|response to salt stress GO:0009737|response to abscisic acid stimulus GO:0010228|vegetative to reproductive phase transition of meristem GO:0010555|response to mannitol stimulus GO:0042752|regulation of circadian rhythm GO:0045893|positive regulation of transcription, DNA-dependent	GO:0005515|protein binding	GO:0005634|nucleus GO:0005730|nucleolus
pt2_03036	A	A3S	Potri.001G288800	Potri.001G288800(AS) Potri.T131300(AS) Potri.009G083900(DS)	POPTR_0001s29580	NA	NA	AT4G33740.3	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37820.1); Has 138092 Blast hits to 73110 proteins in 2951 species: Archae - 732; Bacteria - 17903; Metazoa - 48520; Fungi - 16808; Plants - 7078; Viruses - 1044; Other Eukaryotes - 46007 (source: NCBI BLink). | chr4:16187384-16188802 FORWARD LENGTH=472	NA	NA	IMGA|Medtr5g005430.1	hypothetical protein chr5 206515-204833 E EGN_Mt100125 20111014	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0008150|biological_process GO:0009086|methionine biosynthetic process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_03037	A	A3S	Potri.001G288900	Potri.001G288900(AS) Potri.T131200(AS) Potri.T131300(AA)	POPTR_0001s29590	NA	NA	AT1G10020.1	| Symbols: | Protein of unknown function (DUF1005) | chr1:3269939-3271732 REVERSE LENGTH=461	LOC_Os07g04150.1	protein|stress-induced protein, putative, expressed	IMGA|Medtr5g005420.1	hypothetical protein chr5 200495-202040 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03038	A	A2S	Potri.T131100	Potri.T131100(AS) Potri.001G289000(AS)	POPTR_0001s29600	sp|Q112K0|SYD_TRIEI	Aspartate--tRNA ligase OS=Trichodesmium erythraeum (strain IMS101) GN=aspS PE=3 SV=1	AT4G33760.1	| Symbols: | tRNA synthetase class II (D, K and N) family protein | chr4:16189285-16193260 REVERSE LENGTH=664	LOC_Os01g06020.1	protein|aspartyl-tRNA synthetase, putative, expressed	IMGA|Medtr1g113700.1	Aspartyl-tRNA synthetase chr1 32838273-32829107 E EGN_Mt100125 20111014	GO:0006364|rRNA processing GO:0006399|tRNA metabolic process GO:0006418|tRNA aminoacylation for protein translation GO:0009658|chloroplast organization GO:0048481|ovule development	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0004812|aminoacyl-tRNA ligase activity GO:0005524|ATP binding GO:0016874|ligase activity	GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0009507|chloroplast GO:0016020|membrane
pt2_03039	A	A2S	Potri.001G289100	Potri.001G289100(AS) Potri.009G084400(BS)	POPTR_0001s29610	NA	NA	AT2G16270.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16630.1); Has 1844 Blast hits to 1256 proteins in 271 species: Archae - 6; Bacteria - 283; Metazoa - 434; Fungi - 153; Plants - 91; Viruses - 52; Other Eukaryotes - 825 (source: NCBI BLink). | chr2:7045744-7048313 REVERSE LENGTH=759	LOC_Os03g46920.1	protein|expressed protein	NA	NA	GO:0000226|microtubule cytoskeleton organization GO:0008150|biological_process GO:0051225|spindle assembly	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_03040	A	A1S	Potri.001G289200	Potri.001G289200(AS)	POPTR_0001s29620	sp|Q9FR53|TOR_ARATH	Serine/threonine-protein kinase TOR OS=Arabidopsis thaliana GN=TOR PE=1 SV=1	AT1G50030.1	| Symbols: TOR | target of rapamycin | chr1:18522626-18539619 REVERSE LENGTH=2481	LOC_Os03g52794.1	protein|phosphatidylinositol kinase, putative, expressed	IMGA|Medtr5g005380.1	Serine/threonine protein kinase mTOR chr5 185884-152963 E EGN_Mt100125 20111014	GO:0007062|sister chromatid cohesion GO:0007131|reciprocal meiotic recombination GO:0007155|cell adhesion GO:0009303|rRNA transcription GO:0009407|toxin catabolic process GO:0009790|embryo development GO:0009791|post-embryonic development GO:0009793|embryo development ending in seed dormancy GO:0009880|embryonic pattern specification GO:0009887|organ morphogenesis GO:0009888|tissue development GO:0010072|primary shoot apical meristem specification GO:0010090|trichome morphogenesis GO:0010228|vegetative to reproductive phase transition of meristem GO:0010431|seed maturation GO:0010507|negative regulation of autophagy GO:0010638|positive regulation of organelle organization GO:0030307|positive regulation of cell growth GO:0033044|regulation of chromosome organization GO:0040019|positive regulation of embryonic development GO:0042138|meiotic DNA double-strand break formation GO:0045010|actin nucleation GO:0045132|meiotic chromosome segregation GO:0045595|regulation of cell differentiation GO:0045893|positive regulation of transcription, DNA-dependent GO:0048316|seed development GO:0048765|root hair cell differentiation GO:0071555|cell wall organization GO:2000234|positive regulation of rRNA processing	GO:0000975|regulatory region DNA binding GO:0005515|protein binding GO:0016303|1-phosphatidylinositol-3-kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0016773|phosphotransferase activity, alcohol group as acceptor GO:0042802|identical protein binding GO:0043621|protein self-association	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005886|plasma membrane
pt2_03041	G	G1	NA	NA	POPTR_0001s29640	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03042	A	A2S	Potri.001G289300	Potri.001G289300(AS) Potri.009G084700(DS)	POPTR_0001s29650	sp|Q43117|KPYA_RICCO	Pyruvate kinase isozyme A, chloroplastic OS=Ricinus communis PE=1 SV=1	AT3G22960.1	| Symbols: PKP1, PKP-ALPHA | Pyruvate kinase family protein | chr3:8139369-8141771 FORWARD LENGTH=596	LOC_Os03g46910.1	protein|pyruvate kinase, putative, expressed	IMGA|Medtr5g014140.1	Pyruvate kinase chr5 4444843-4450264 H EGN_Mt100125 20111014	GO:0006096|glycolysis GO:0006629|lipid metabolic process GO:0010431|seed maturation GO:0016049|cell growth GO:0016126|sterol biosynthetic process GO:0030243|cellulose metabolic process GO:0046686|response to cadmium ion	GO:0000287|magnesium ion binding GO:0003824|catalytic activity GO:0004743|pyruvate kinase activity GO:0030955|potassium ion binding	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_03043	A	A1S	Potri.001G289400	Potri.001G289400(AS)	POPTR_0001s29660	NA	NA	AT1G50020.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 72 Blast hits to 72 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:18520144-18521600 REVERSE LENGTH=209	LOC_Os11g34870.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane
pt2_03044	A	A2S	Potri.001G289500	Potri.001G289500(AS) Potri.009G085100(DS)	POPTR_0001s29670	sp|P33629|TBA_PRUDU	Tubulin alpha chain OS=Prunus dulcis GN=TUBA PE=2 SV=1	AT4G14960.2	| Symbols: TUA6 | Tubulin/FtsZ family protein | chr4:8548769-8550319 REVERSE LENGTH=450	LOC_Os11g14220.1	protein|tubulin/FtsZ domain containing protein, putative, expressed	IMGA|contig_76569_1.1	Tubulin alpha-7 chain contig_76569 5816-1428 H PREDN 20111014	GO:0000226|microtubule cytoskeleton organization GO:0000902|cell morphogenesis GO:0006094|gluconeogenesis GO:0006184|GTP catabolic process GO:0007010|cytoskeleton organization GO:0009651|response to salt stress GO:0010498|proteasomal protein catabolic process GO:0016049|cell growth GO:0048193|Golgi vesicle transport GO:0051258|protein polymerization GO:0071258|cellular response to gravity	GO:0003924|GTPase activity GO:0005198|structural molecule activity GO:0005200|structural constituent of cytoskeleton GO:0005515|protein binding GO:0005525|GTP binding	GO:0005618|cell wall GO:0005730|nucleolus GO:0005737|cytoplasm GO:0005773|vacuole GO:0005829|cytosol GO:0005874|microtubule GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane GO:0045298|tubulin complex
pt2_03045	A	A1S	Potri.001G289600	Potri.001G289600(AS)	POPTR_0001s29680	NA	NA	AT4G33780.1	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: short hypocotyl in white light1 (TAIR:AT1G69935.1); Has 40 Blast hits to 40 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:16202174-16203617 REVERSE LENGTH=203	LOC_Os03g12930.1	protein|expressed protein	IMGA|Medtr5g037230.1	hypothetical protein chr5 15836364-15840254 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_03046	G	G8	NA	NA	POPTR_0001s29690	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03047	A	A1S	Potri.001G289700	Potri.001G289700(AS)	POPTR_0001s29700	NA	NA	AT1G17870.1	| Symbols: ATEGY3, EGY3 | ethylene-dependent gravitropism-deficient and yellow-green-like 3 | chr1:6150036-6152185 REVERSE LENGTH=573	LOC_Os03g51920.1	protein|peptidase, M50 family, putative, expressed	IMGA|Medtr5g093790.1	hypothetical protein chr5 39907459-39911804 E EGN_Mt100125 20111014	GO:0006457|protein folding GO:0009408|response to heat GO:0009644|response to high light intensity GO:0042542|response to hydrogen peroxide	NA	GO:0005739|mitochondrion
pt2_03048	A	A1S	Potri.001G289700	Potri.001G289700(AS)	POPTR_0001s29700	NA	NA	AT1G17870.1	| Symbols: ATEGY3, EGY3 | ethylene-dependent gravitropism-deficient and yellow-green-like 3 | chr1:6150036-6152185 REVERSE LENGTH=573	LOC_Os03g51920.1	protein|peptidase, M50 family, putative, expressed	IMGA|Medtr5g093790.1	hypothetical protein chr5 39907459-39911804 E EGN_Mt100125 20111014	GO:0006457|protein folding GO:0009408|response to heat GO:0009644|response to high light intensity GO:0042542|response to hydrogen peroxide	NA	GO:0005739|mitochondrion
pt2_03049	A	A1S	Potri.001G289800	Potri.001G289800(AS)	POPTR_0001s29710	sp|B6EUA9|PR40A_ARATH	Pre-mRNA-processing protein 40A OS=Arabidopsis thaliana GN=PRP40A PE=1 SV=1	AT1G44910.2	| Symbols: ATPRP40A, PRP40A | pre-mRNA-processing protein 40A | chr1:16975930-16982647 FORWARD LENGTH=926	LOC_Os01g34780.2	protein|protein binding protein, putative, expressed	NA	NA	GO:0008380|RNA splicing	GO:0070063|RNA polymerase binding	GO:0005634|nucleus GO:0005829|cytosol GO:0005886|plasma membrane GO:0016592|mediator complex
pt2_03050	A	A2S	Potri.001G289900	Potri.001G289900(AS) Potri.003G118000(DS)	POPTR_0001s29720	sp|Q9LDH3|PT112_ARATH	Probable sugar phosphate/phosphate translocator At1g12500 OS=Arabidopsis thaliana GN=At1g12500 PE=2 SV=1	AT1G12500.1	| Symbols: | Nucleotide-sugar transporter family protein | chr1:4263542-4264957 REVERSE LENGTH=361	LOC_Os03g17740.1	protein|transporter, putative, expressed	IMGA|Medtr5g081710.1	Maturase chr5 33996127-34007844 E EGN_Mt100125 20111014	GO:0016049|cell growth GO:0030243|cellulose metabolic process	GO:0008514|organic anion transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_03051	A	A1S	Potri.001G290000	Potri.001G290000(AS)	POPTR_0001s29730	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03052	A	A1S	Potri.001G290100	Potri.001G290100(AS)	POPTR_0001s29740	sp|P54461|RSME_BACSU	Ribosomal RNA small subunit methyltransferase E OS=Bacillus subtilis (strain 168) GN=rsmE PE=1 SV=1	AT1G50000.1	| Symbols: | methyltransferases | chr1:18515183-18517244 REVERSE LENGTH=296	LOC_Os03g51984.1	protein|differentiation protein, putative, expressed	NA	NA	GO:0006364|rRNA processing GO:0006744|ubiquinone biosynthetic process	GO:0008168|methyltransferase activity	GO:0009507|chloroplast
pt2_03053	A	A1S	Potri.001G290200	Potri.001G290200(AS)	POPTR_0001s29750	NA	NA	AT3G19660.1	| Symbols: | unknown protein; Has 16 Blast hits to 16 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:6825678-6825872 REVERSE LENGTH=64	NA	NA	IMGA|Medtr5g005330.1	hypothetical protein chr5 134769-133905 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_03054	A	A1S	Potri.001G290300	Potri.001G290300(AS)	POPTR_0001s29760	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03055	A	A1S	Potri.001G290400	Potri.001G290400(AS)	POPTR_0001s29770	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03056	G	G1	NA	NA	POPTR_0001s29780	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03057	A	A3S	Potri.001G290600	Potri.001G290600(AS) Potri.001G291000(AS) Potri.T116800(BS)	POPTR_0001s29790	NA	NA	AT5G14930.2	| Symbols: SAG101 | senescence-associated gene 101 | chr5:4828754-4830769 FORWARD LENGTH=537	LOC_Os09g22450.1	protein|lipase, putative, expressed	NA	NA	GO:0006629|lipid metabolic process GO:0007568|aging GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process GO:0009863|salicylic acid mediated signaling pathway GO:0010200|response to chitin GO:0030968|endoplasmic reticulum unfolded protein response GO:0031348|negative regulation of defense response GO:0045087|innate immune response	GO:0004091|carboxylesterase activity GO:0004806|triglyceride lipase activity	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_03058	A	A2S	Potri.001G290700	Potri.001G290700(AS) Potri.001G291200(BS)	POPTR_0001s29800	sp|Q9LJN2|MRS23_ARATH	Magnesium transporter MRS2-3 OS=Arabidopsis thaliana GN=MRS2-3 PE=1 SV=1	AT3G19640.1	| Symbols: MGT4, MRS2-3 | magnesium transporter 4 | chr3:6820969-6823104 FORWARD LENGTH=484	LOC_Os01g68040.1	protein|CorA-like magnesium transporter protein, putative, expressed	IMGA|Medtr5g005240.1	Magnesium transporter chr5 106710-104195 F EGN_Mt100125 20111014	GO:0009644|response to high light intensity GO:0030001|metal ion transport GO:0042542|response to hydrogen peroxide GO:0055085|transmembrane transport	GO:0015095|magnesium ion transmembrane transporter activity GO:0046873|metal ion transmembrane transporter activity	GO:0005634|nucleus GO:0005886|plasma membrane GO:0016020|membrane
pt2_03059	A	A1S	Potri.001G290800	Potri.001G290800(AS)	POPTR_0001s29810	sp|Q9C7Z9|SCP18_ARATH	Serine carboxypeptidase-like 18 OS=Arabidopsis thaliana GN=SCPL18 PE=2 SV=2	AT1G73300.1	| Symbols: scpl2 | serine carboxypeptidase-like 2 | chr1:27559673-27562048 REVERSE LENGTH=441	LOC_Os10g01110.1	protein|OsSCP44 - Putative Serine Carboxypeptidase homologue, expressed	IMGA|Medtr1g100600.1	Serine carboxypeptidase II-3 chr1 29361758-29358915 H EGN_Mt100125 20111014	GO:0006508|proteolysis	GO:0004185|serine-type carboxypeptidase activity	GO:0005576|extracellular region
pt2_03060	A	A6S	Potri.001G290900	Potri.001G290900(AS) Potri.001G290800(BS) Potri.T117600(BS) Potri.001G291800(BS) Potri.001G291300(BS) Potri.001G291700(DS)	POPTR_0001s29840	sp|Q9C7Z9|SCP18_ARATH	Serine carboxypeptidase-like 18 OS=Arabidopsis thaliana GN=SCPL18 PE=2 SV=2	AT1G33540.1	| Symbols: scpl18 | serine carboxypeptidase-like 18 | chr1:12162349-12164700 REVERSE LENGTH=446	LOC_Os04g09720.2	protein|OsSCP22 - Putative Serine Carboxypeptidase homologue, expressed	IMGA|contig_77658_1.1	Serine carboxypeptidase family protein expressed contig_77658 26-2338 H PREDN 20111014	GO:0006508|proteolysis	GO:0004185|serine-type carboxypeptidase activity	GO:0005576|extracellular region
pt2_03061	B	B1S	Potri.001G291100	Potri.001G291100(BS)	POPTR_0001s29850	NA	NA	ATCG00270.1	| Symbols: PSBD | photosystem II reaction center protein D | chrC:32711-33772 FORWARD LENGTH=353	LOC_Os04g16872.1	protein|photosystem II D2 protein, putative, expressed	IMGA|Medtr5g094930.1	Photosystem II D2 protein chr5 40466288-40466656 H EGN_Mt100125 20111014	GO:0006091|generation of precursor metabolites and energy GO:0006354|DNA-dependent transcription, elongation GO:0009769|photosynthesis, light harvesting in photosystem II GO:0009772|photosynthetic electron transport in photosystem II GO:0010207|photosystem II assembly GO:0015979|photosynthesis GO:0019684|photosynthesis, light reaction	GO:0045156|electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity GO:0045157|electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity	GO:0005737|cytoplasm GO:0009507|chloroplast GO:0009523|photosystem II GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009579|thylakoid GO:0010287|plastoglobule GO:0016020|membrane GO:0030076|light-harvesting complex
pt2_03062	C	C4S	Potri.001G291900	Potri.001G291900(CS) Potri.001G291600(CS) Potri.001G290700(CS) Potri.001G291200(CS)	sp|Q8L4S2|MRS2F_ORYSJ	Magnesium transporter MRS2-F OS=Oryza sativa subsp. japonica GN=MRS2-F PE=1 SV=1	AT3G19640.1	| Symbols: MGT4, MRS2-3 | magnesium transporter 4 | chr3:6820969-6823104 FORWARD LENGTH=484	LOC_Os01g68040.1	protein|CorA-like magnesium transporter protein, putative, expressed	IMGA|Medtr5g005240.1	Magnesium transporter chr5 106710-104195 F EGN_Mt100125 20111014	GO:0009644|response to high light intensity GO:0030001|metal ion transport GO:0042542|response to hydrogen peroxide GO:0055085|transmembrane transport	GO:0015095|magnesium ion transmembrane transporter activity GO:0046873|metal ion transmembrane transporter activity	GO:0005634|nucleus GO:0005886|plasma membrane GO:0016020|membrane
pt2_03063	A	A3S	Potri.T117600	Potri.T117600(AS) Potri.001G291300(AS) Potri.001G291700(BS)	POPTR_0001s29870	sp|Q9C7Z9|SCP18_ARATH	Serine carboxypeptidase-like 18 OS=Arabidopsis thaliana GN=SCPL18 PE=2 SV=2	AT1G33540.1	| Symbols: scpl18 | serine carboxypeptidase-like 18 | chr1:12162349-12164700 REVERSE LENGTH=446	LOC_Os10g01110.1	protein|OsSCP44 - Putative Serine Carboxypeptidase homologue, expressed	IMGA|contig_77658_1.1	Serine carboxypeptidase family protein expressed contig_77658 26-2338 H PREDN 20111014	GO:0006508|proteolysis	GO:0004185|serine-type carboxypeptidase activity	GO:0005576|extracellular region
pt2_03064	A	A6S	Potri.001G291800	Potri.001G291800(AS) Potri.001G291700(AS) Potri.001G290900(AS) Potri.001G290800(BS) Potri.T117600(BS) Potri.001G291300(BS)	POPTR_0001s29880	sp|Q9C7Z9|SCP18_ARATH	Serine carboxypeptidase-like 18 OS=Arabidopsis thaliana GN=SCPL18 PE=2 SV=2	AT1G73300.1	| Symbols: scpl2 | serine carboxypeptidase-like 2 | chr1:27559673-27562048 REVERSE LENGTH=441	LOC_Os10g01110.1	protein|OsSCP44 - Putative Serine Carboxypeptidase homologue, expressed	IMGA|contig_77658_1.1	Serine carboxypeptidase family protein expressed contig_77658 26-2338 H PREDN 20111014	GO:0006508|proteolysis	GO:0004185|serine-type carboxypeptidase activity	GO:0005576|extracellular region
pt2_03065	A	A3S	Potri.001G291600	Potri.001G291600(AS) Potri.001G291200(DS) Potri.001G290700(DS)	POPTR_0001s29890	sp|Q9LJN2|MRS23_ARATH	Magnesium transporter MRS2-3 OS=Arabidopsis thaliana GN=MRS2-3 PE=1 SV=1	AT3G19640.1	| Symbols: MGT4, MRS2-3 | magnesium transporter 4 | chr3:6820969-6823104 FORWARD LENGTH=484	LOC_Os01g68040.1	protein|CorA-like magnesium transporter protein, putative, expressed	IMGA|Medtr5g005240.1	Magnesium transporter chr5 106710-104195 F EGN_Mt100125 20111014	GO:0009644|response to high light intensity GO:0030001|metal ion transport GO:0042542|response to hydrogen peroxide GO:0055085|transmembrane transport	GO:0015095|magnesium ion transmembrane transporter activity GO:0046873|metal ion transmembrane transporter activity	GO:0005634|nucleus GO:0005886|plasma membrane GO:0016020|membrane
pt2_03066	A	A1S	Potri.001G291700	Potri.001G291700(AS)	POPTR_0001s29900	sp|Q9C7Z9|SCP18_ARATH	Serine carboxypeptidase-like 18 OS=Arabidopsis thaliana GN=SCPL18 PE=2 SV=2	AT1G33540.1	| Symbols: scpl18 | serine carboxypeptidase-like 18 | chr1:12162349-12164700 REVERSE LENGTH=446	LOC_Os04g09720.2	protein|OsSCP22 - Putative Serine Carboxypeptidase homologue, expressed	IMGA|contig_77658_1.1	Serine carboxypeptidase family protein expressed contig_77658 26-2338 H PREDN 20111014	GO:0006508|proteolysis	GO:0004185|serine-type carboxypeptidase activity	GO:0005576|extracellular region
pt2_03067	A	A5S	Potri.T117600	Potri.T117600(AS) Potri.001G291800(AS) Potri.001G291300(AS) Potri.001G290900(AS) Potri.001G291700(BS)	POPTR_0001s29910	sp|Q9C7Z9|SCP18_ARATH	Serine carboxypeptidase-like 18 OS=Arabidopsis thaliana GN=SCPL18 PE=2 SV=2	AT1G33540.1	| Symbols: scpl18 | serine carboxypeptidase-like 18 | chr1:12162349-12164700 REVERSE LENGTH=446	LOC_Os10g01110.1	protein|OsSCP44 - Putative Serine Carboxypeptidase homologue, expressed	IMGA|contig_77658_1.1	Serine carboxypeptidase family protein expressed contig_77658 26-2338 H PREDN 20111014	GO:0006508|proteolysis	GO:0004185|serine-type carboxypeptidase activity	GO:0005576|extracellular region
pt2_03068	A	A1S	Potri.001G291900	Potri.001G291900(AS)	POPTR_0001s29920	sp|Q8L4S2|MRS2F_ORYSJ	Magnesium transporter MRS2-F OS=Oryza sativa subsp. japonica GN=MRS2-F PE=1 SV=1	AT3G19640.1	| Symbols: MGT4, MRS2-3 | magnesium transporter 4 | chr3:6820969-6823104 FORWARD LENGTH=484	LOC_Os01g68040.1	protein|CorA-like magnesium transporter protein, putative, expressed	IMGA|Medtr5g005240.1	Magnesium transporter chr5 106710-104195 F EGN_Mt100125 20111014	GO:0009644|response to high light intensity GO:0030001|metal ion transport GO:0042542|response to hydrogen peroxide GO:0055085|transmembrane transport	GO:0015095|magnesium ion transmembrane transporter activity GO:0046873|metal ion transmembrane transporter activity	GO:0005634|nucleus GO:0005886|plasma membrane GO:0016020|membrane
pt2_03069	A	A1S	Potri.001G291900	Potri.001G291900(AS)	POPTR_0001s29930	sp|Q8L4S2|MRS2F_ORYSJ	Magnesium transporter MRS2-F OS=Oryza sativa subsp. japonica GN=MRS2-F PE=1 SV=1	AT3G19640.1	| Symbols: MGT4, MRS2-3 | magnesium transporter 4 | chr3:6820969-6823104 FORWARD LENGTH=484	LOC_Os01g68040.1	protein|CorA-like magnesium transporter protein, putative, expressed	IMGA|Medtr5g005240.1	Magnesium transporter chr5 106710-104195 F EGN_Mt100125 20111014	GO:0009644|response to high light intensity GO:0030001|metal ion transport GO:0042542|response to hydrogen peroxide GO:0055085|transmembrane transport	GO:0015095|magnesium ion transmembrane transporter activity GO:0046873|metal ion transmembrane transporter activity	GO:0005634|nucleus GO:0005886|plasma membrane GO:0016020|membrane
pt2_03070	A	A1S	Potri.001G292000	Potri.001G292000(AS)	POPTR_0001s29940	NA	NA	AT1G49975.1	| Symbols: | INVOLVED IN: photosynthesis; LOCATED IN: photosystem I, chloroplast, thylakoid membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit N (InterPro:IPR008796); Has 34 Blast hits to 34 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:18504845-18505431 FORWARD LENGTH=129	LOC_Os03g52130.1	protein|expressed protein	NA	NA	GO:0015979|photosynthesis	GO:0005516|calmodulin binding	GO:0009507|chloroplast GO:0009522|photosystem I GO:0042651|thylakoid membrane
pt2_03071	A	A1S	Potri.001G292100	Potri.001G292100(AS)	POPTR_0001s29950	NA	NA	AT4G33800.1	| Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:16210404-16211307 REVERSE LENGTH=170	NA	NA	IMGA|Medtr5g005230.1	hypothetical protein chr5 99039-100032 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03072	A	A1S	Potri.001G292100	Potri.001G292100(AS)	POPTR_0001s29950	NA	NA	AT4G33800.1	| Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:16210404-16211307 REVERSE LENGTH=170	NA	NA	IMGA|Medtr5g005230.1	hypothetical protein chr5 99039-100032 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03073	A	A1S	Potri.001G292100	Potri.001G292100(AS)	POPTR_0001s29950	NA	NA	AT4G33800.1	| Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:16210404-16211307 REVERSE LENGTH=170	NA	NA	IMGA|Medtr5g005230.1	hypothetical protein chr5 99039-100032 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03074	A	A1S	Potri.001G292200	Potri.001G292200(AS)	POPTR_0001s29960	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03075	A	A2S	Potri.001G292300	Potri.001G292300(AS) Potri.009G086700(DS)	POPTR_0001s29970	sp|Q6YXH8|CCD41_ORYSJ	Cyclin-D4-1 OS=Oryza sativa subsp. japonica GN=CYCD4-1 PE=2 SV=2	AT2G22490.1	| Symbols: CYCD2;1, ATCYCD2;1 | Cyclin D2;1 | chr2:9554157-9555873 REVERSE LENGTH=361	LOC_Os09g29100.1	protein|cyclin, putative, expressed	IMGA|Medtr5g032550.1	Cyclin D2 chr5 13556615-13559060 E EGN_Mt100125 20111014	GO:0010440|stomatal lineage progression GO:0042023|DNA endoreduplication GO:0045736|negative regulation of cyclin-dependent protein kinase activity GO:0051726|regulation of cell cycle	GO:0005515|protein binding GO:0016538|cyclin-dependent protein kinase regulator activity	GO:0005634|nucleus
pt2_03076	A	A1S	Potri.001G292500	Potri.001G292500(AS)	POPTR_0001s29980	sp|P93039|NAT4_ARATH	Nucleobase-ascorbate transporter 4 OS=Arabidopsis thaliana GN=NAT4 PE=2 SV=2	AT1G49960.1	| Symbols: | Xanthine/uracil permease family protein | chr1:18498700-18501699 FORWARD LENGTH=526	NA	NA	NA	NA	GO:0006810|transport GO:0055085|transmembrane transport	GO:0005215|transporter activity GO:0022857|transmembrane transporter activity	GO:0016020|membrane
pt2_03077	A	A1S	Potri.001G292600	Potri.001G292600(AS)	POPTR_0001s29990	sp|Q27GI3|NAT6_ARATH	Nucleobase-ascorbate transporter 6 OS=Arabidopsis thaliana GN=NAT6 PE=2 SV=2	AT5G62890.4	| Symbols: | Xanthine/uracil permease family protein | chr5:25243723-25246748 FORWARD LENGTH=476	LOC_Os02g50820.1	protein|nucleobase-ascorbate transporter, putative, expressed	IMGA|Medtr5g035180.1	Nucleobase ascorbate transporter chr5 14879564-14883748 H EGN_Mt100125 20111014	GO:0006810|transport GO:0055085|transmembrane transport	GO:0005215|transporter activity GO:0022857|transmembrane transporter activity	GO:0016020|membrane
pt2_03078	A	A1S	Potri.001G292700	Potri.001G292700(AS)	POPTR_0001s30000	sp|Q8VWK4|TRB1_ARATH	Telomere repeat-binding factor 1 OS=Arabidopsis thaliana GN=TRB1 PE=1 SV=1	AT1G49950.1	| Symbols: TRB1, ATTRB1 | telomere repeat binding factor 1 | chr1:18494439-18496713 REVERSE LENGTH=300	LOC_Os12g41920.2	protein|single myb histone, putative, expressed	IMGA|Medtr5g015340.1	Single myb histone chr5 5047202-5052437 F EGN_Mt100125 20111014	GO:0006334|nucleosome assembly GO:0009651|response to salt stress GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009739|response to gibberellin stimulus GO:0009751|response to salicylic acid stimulus GO:0009753|response to jasmonic acid stimulus GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process GO:0046686|response to cadmium ion	GO:0003677|DNA binding GO:0003691|double-stranded telomeric DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0042803|protein homodimerization activity	GO:0000786|nucleosome GO:0005634|nucleus
pt2_03079	A	A1S	Potri.001G292800	Potri.001G292800(AS)	POPTR_0001s30010	NA	NA	AT2G14680.3	| Symbols: MEE13 | myosin heavy chain-related | chr2:6278256-6283766 FORWARD LENGTH=629	LOC_Os03g31730.1	protein|expressed protein	IMGA|Medtr5g005010.1	hypothetical protein chr5 5565-12331 E EGN_Mt100125 20111014	GO:0008284|positive regulation of cell proliferation GO:0009793|embryo development ending in seed dormancy	GO:0003674|molecular_function	GO:0005737|cytoplasm
pt2_03080	B	B1S	Potri.001G292900	Potri.001G292900(BS)	POPTR_0001s30020	sp|P29675|SF3_HELAN	Pollen-specific protein SF3 OS=Helianthus annuus GN=SF3 PE=2 SV=1	AT1G10200.1	| Symbols: WLIM1 | GATA type zinc finger transcription factor family protein | chr1:3346677-3347763 REVERSE LENGTH=190	LOC_Os12g32620.1	protein|OsWLIM1 - LIM domain protein, putative actin-binding protein and transcription factor, expressed	IMGA|Medtr1g017950.1	Transcription factor lim1 chr1 5236878-5235441 F EGN_Mt100125 20111014	GO:0006944|cellular membrane fusion GO:0051017|actin filament bundle assembly	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding GO:0051015|actin filament binding	GO:0005737|cytoplasm GO:0005886|plasma membrane GO:0015629|actin cytoskeleton
pt2_03081	A	A1S	Potri.001G293100	Potri.001G293100(AS)	POPTR_0001s30030	sp|Q5ZKQ8|ARL8A_CHICK	ADP-ribosylation factor-like protein 8A OS=Gallus gallus GN=ARL8A PE=2 SV=1	AT3G49870.1	| Symbols: ATARLA1C, ARLA1C | ADP-ribosylation factor-like A1C | chr3:18492674-18494021 REVERSE LENGTH=184	LOC_Os03g10370.1	protein|ADP-ribosylation factor, putative, expressed	IMGA|Medtr5g015370.1	ADP-RIBOSYLATION FACTOR-like protein chr5 5065269-5060263 F EGN_Mt100125 20111014	GO:0006661|phosphatidylinositol biosynthetic process GO:0007264|small GTPase mediated signal transduction GO:0009741|response to brassinosteroid stimulus GO:0051607|defense response to virus	GO:0005525|GTP binding	GO:0005576|extracellular region GO:0005622|intracellular GO:0005634|nucleus GO:0005737|cytoplasm GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0005829|cytosol GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_03082	A	A1S	Potri.001G293300	Potri.001G293300(AS)	POPTR_0001s30040	sp|Q7X9B9|NLP2_ARATH	Protein NLP2 OS=Arabidopsis thaliana GN=NLP2 PE=2 SV=3	AT4G35270.1	| Symbols: | Plant regulator RWP-RK family protein | chr4:16777657-16780824 REVERSE LENGTH=963	LOC_Os03g03900.1	protein|NIN, putative, expressed	IMGA|Medtr5g099060.1	Nodule inception protein chr5 42369070-42372458 E EGN_Mt100125 20111014	NA	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_03083	G	G1	NA	NA	POPTR_0001s30050	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03084	C	C1S	Potri.001G293400	Potri.001G293400(CS)	sp|Q43295|KAP1_ARATH	Adenylyl-sulfate kinase 1, chloroplastic OS=Arabidopsis thaliana GN=AKN1 PE=1 SV=1	AT2G14750.1	| Symbols: APK, AKN1, ATAKN1, APK1 | APS kinase | chr2:6314128-6315501 FORWARD LENGTH=276	LOC_Os11g41650.2	protein|adenylyl-sulfate kinase, putative, expressed	IMGA|Medtr5g015530.1	Adenylyl-sulfate kinase chr5 5134638-5130420 E EGN_Mt100125 20111014	GO:0000103|sulfate assimilation GO:0010439|regulation of glucosinolate biosynthetic process GO:0016310|phosphorylation GO:0048232|male gamete generation	GO:0004020|adenylylsulfate kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0009507|chloroplast GO:0009536|plastid
pt2_03085	A	A1S	Potri.001G293600	Potri.001G293600(AS)	POPTR_0001s30070	sp|O74944|POLK_SCHPO	DNA polymerase kappa OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mug40 PE=1 SV=3	AT1G49980.1	| Symbols: | DNA/RNA polymerases superfamily protein | chr1:18508026-18512111 FORWARD LENGTH=671	LOC_Os03g42010.2	protein|DNA-directed polymerase, putative, expressed	IMGA|Medtr5g005030.1	DNA polymerase IV chr5 15245-19705 E EGN_Mt100125 20111014	GO:0006281|DNA repair	GO:0003684|damaged DNA binding GO:0003887|DNA-directed DNA polymerase activity	GO:0005737|cytoplasm GO:0016020|membrane
pt2_03086	A	A1S	Potri.001G293700	Potri.001G293700(AS)	POPTR_0001s30090	NA	NA	NA	NA	LOC_Os10g21020.1	protein|expressed protein	NA	NA	NA	NA	NA
pt2_03087	A	A1S	Potri.001G293800	Potri.001G293800(AS)	POPTR_0001s30100	sp|Q9FJX3|VDAC2_ARATH	Mitochondrial outer membrane protein porin 2 OS=Arabidopsis thaliana GN=VDAC2 PE=1 SV=1	AT5G67500.1	| Symbols: VDAC2, ATVDAC2 | voltage dependent anion channel 2 | chr5:26935223-26937123 FORWARD LENGTH=276	LOC_Os03g10510.1	protein|outer mitochondrial membrane porin, putative, expressed	IMGA|Medtr5g015580.1	Mitochondrial outer membrane protein porin chr5 5154576-5151298 F EGN_Mt100125 20111014	GO:0006096|glycolysis GO:0006820|anion transport GO:0009060|aerobic respiration GO:0009617|response to bacterium GO:0044070|regulation of anion transport GO:0046686|response to cadmium ion GO:0055085|transmembrane transport	GO:0008308|voltage-gated anion channel activity	GO:0005618|cell wall GO:0005739|mitochondrion GO:0005741|mitochondrial outer membrane GO:0005774|vacuolar membrane GO:0009507|chloroplast GO:0009941|chloroplast envelope GO:0016020|membrane
pt2_03088	A	A1S	Potri.001G293900	Potri.001G293900(AS)	POPTR_0001s30110	NA	NA	AT4G25210.1	| Symbols: | DNA-binding storekeeper protein-related transcriptional regulator | chr4:12918446-12919552 FORWARD LENGTH=368	LOC_Os07g44200.1	protein|transcription regulator, putative, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0008150|biological_process	NA	GO:0005634|nucleus GO:0005730|nucleolus GO:0005829|cytosol GO:0009507|chloroplast GO:0016592|mediator complex
pt2_03089	A	A1S	Potri.001G294000	Potri.001G294000(AS)	POPTR_0001s30120	sp|Q9FJX3|VDAC2_ARATH	Mitochondrial outer membrane protein porin 2 OS=Arabidopsis thaliana GN=VDAC2 PE=1 SV=1	AT5G67500.1	| Symbols: VDAC2, ATVDAC2 | voltage dependent anion channel 2 | chr5:26935223-26937123 FORWARD LENGTH=276	LOC_Os03g10510.1	protein|outer mitochondrial membrane porin, putative, expressed	IMGA|Medtr5g015580.1	Mitochondrial outer membrane protein porin chr5 5154576-5151298 F EGN_Mt100125 20111014	GO:0006096|glycolysis GO:0006820|anion transport GO:0009060|aerobic respiration GO:0009617|response to bacterium GO:0044070|regulation of anion transport GO:0046686|response to cadmium ion GO:0055085|transmembrane transport	GO:0008308|voltage-gated anion channel activity	GO:0005618|cell wall GO:0005739|mitochondrion GO:0005741|mitochondrial outer membrane GO:0005774|vacuolar membrane GO:0009507|chloroplast GO:0009941|chloroplast envelope GO:0016020|membrane
pt2_03090	B	B1S	Potri.001G294100	Potri.001G294100(BS)	POPTR_0001s30130	sp|Q9FJX3|VDAC2_ARATH	Mitochondrial outer membrane protein porin 2 OS=Arabidopsis thaliana GN=VDAC2 PE=1 SV=1	AT5G67500.1	| Symbols: VDAC2, ATVDAC2 | voltage dependent anion channel 2 | chr5:26935223-26937123 FORWARD LENGTH=276	LOC_Os03g10510.1	protein|outer mitochondrial membrane porin, putative, expressed	IMGA|Medtr5g015580.1	Mitochondrial outer membrane protein porin chr5 5154576-5151298 F EGN_Mt100125 20111014	GO:0006096|glycolysis GO:0006820|anion transport GO:0009060|aerobic respiration GO:0009617|response to bacterium GO:0044070|regulation of anion transport GO:0046686|response to cadmium ion GO:0055085|transmembrane transport	GO:0008308|voltage-gated anion channel activity	GO:0005618|cell wall GO:0005739|mitochondrion GO:0005741|mitochondrial outer membrane GO:0005774|vacuolar membrane GO:0009507|chloroplast GO:0009941|chloroplast envelope GO:0016020|membrane
pt2_03091	A	A1S	Potri.001G294200	Potri.001G294200(AS)	POPTR_0001s30140	sp|Q9N4Y9|ZFPL1_CAEEL	Zinc finger protein-like 1 homolog OS=Caenorhabditis elegans GN=Y45G12B.2 PE=2 SV=1	AT2G14835.2	| Symbols: | RING/U-box superfamily protein | chr2:6367238-6370610 FORWARD LENGTH=343	LOC_Os10g20600.1	protein|zinc finger, C3HC4 type domain containing protein, expressed	NA	NA	GO:0007067|mitosis GO:0009737|response to abscisic acid stimulus	GO:0008270|zinc ion binding	NA
pt2_03092	A	A1S	Potri.001G294300	Potri.001G294300(AS)	POPTR_0001s30150	sp|Q7XHI9|BH084_ARATH	Transcription factor bHLH84 OS=Arabidopsis thaliana GN=BHLH84 PE=2 SV=1	AT2G14760.1	| Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr2:6321840-6323312 REVERSE LENGTH=328	LOC_Os12g39850.1	protein|helix-loop-helix DNA-binding domain containing protein, expressed	IMGA|Medtr5g005110.1	Transcription factor bHLH85 chr5 51582-49806 H EGN_Mt100125 20111014	GO:0009555|pollen development	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_03093	A	A1S	Potri.001G294400	Potri.001G294400(AS)	POPTR_0001s30160	sp|O80977|VSR3_ARATH	Vacuolar-sorting receptor 3 OS=Arabidopsis thaliana GN=VSR3 PE=2 SV=1	AT2G14740.2	| Symbols: ATVSR3, VSR3, VSR2;2, BP80-2;2 | vaculolar sorting receptor 3 | chr2:6308895-6312303 FORWARD LENGTH=628	LOC_Os10g20630.1	protein|vacuolar-sorting receptor precursor, putative, expressed	IMGA|Medtr5g005100.1	Vacuolar-sorting receptor chr5 44556-48812 E EGN_Mt100125 20111014	GO:0006623|protein targeting to vacuole GO:0006886|intracellular protein transport	GO:0005509|calcium ion binding	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0005887|integral to plasma membrane GO:0016020|membrane GO:0017119|Golgi transport complex
pt2_03094	A	A3S	Potri.001G294500	Potri.001G294500(AS) Potri.012G074400(DS) Potri.016G111500(DS)	POPTR_0001s30170	NA	NA	AT5G62580.1	| Symbols: | ARM repeat superfamily protein | chr5:25120010-25122259 FORWARD LENGTH=615	NA	NA	IMGA|Medtr5g036950.1	Microtubule-associated protein TORTIFOLIA1 chr5 15701640-15706174 E EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_03095	A	A1S	Potri.001G294600	Potri.001G294600(AS)	POPTR_0001s30180	NA	NA	AT3G19610.1	| Symbols: | Plant protein of unknown function (DUF936) | chr3:6812493-6814660 REVERSE LENGTH=640	LOC_Os09g34110.2	protein|expressed protein	IMGA|Medtr5g034370.1	hypothetical protein chr5 14472516-14475481 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_03096	A	A1S	Potri.001G294700	Potri.001G294700(AS)	POPTR_0001s30190	sp|Q9LJN4|BXL5_ARATH	Probable beta-D-xylosidase 5 OS=Arabidopsis thaliana GN=BXL5 PE=2 SV=2	AT3G19620.1	| Symbols: | Glycosyl hydrolase family protein | chr3:6815613-6818308 REVERSE LENGTH=781	LOC_Os04g54810.1	protein|beta-D-xylosidase, putative, expressed	IMGA|Medtr5g030860.1	Beta-D-xylosidase chr5 12766808-12771719 E EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0005576|extracellular region GO:0005618|cell wall
pt2_03097	A	A1S	Potri.001G294800	Potri.001G294800(AS)	POPTR_0001s30200	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_03098	A	A1S	Potri.001G294900	Potri.001G294900(AS)	POPTR_0001s30210	sp|A9A3L9|RLMN_NITMS	Ribosomal RNA large subunit methyltransferase N OS=Nitrosopumilus maritimus (strain SCM1) GN=rlmN PE=3 SV=1	AT3G19630.1	| Symbols: | Radical SAM superfamily protein | chr3:6818676-6820674 REVERSE LENGTH=372	LOC_Os03g10520.1	protein|radical SAM enzyme, putative, expressed	IMGA|Medtr5g005050.1	Ribosomal RNA large subunit methyltransferase N chr5 24869-22565 E EGN_Mt100125 20111014	GO:0006364|rRNA processing GO:0006396|RNA processing	GO:0003824|catalytic activity GO:0008173|RNA methyltransferase activity GO:0051536|iron-sulfur cluster binding	GO:0005737|cytoplasm
pt2_03099	A	A1S	Potri.001G295000	Potri.001G295000(AS)	POPTR_0001s30220	NA	NA	AT3G19650.1	| Symbols: | cyclin-related | chr3:6823543-6825174 FORWARD LENGTH=302	LOC_Os03g10590.1	protein|splicing factor, putative, expressed	IMGA|Medtr1g106800.1	Endo-1 4-beta-xylanase chr1 31440504-31435415 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03100	A	A2S	Potri.001G295100	Potri.001G295100(AS) Potri.009G089200(DS)	POPTR_0001s30230	sp|Q9WVA3|BUB3_MOUSE	Mitotic checkpoint protein BUB3 OS=Mus musculus GN=Bub3 PE=2 SV=2	AT3G19590.1	| Symbols: BUB3.1 | Transducin/WD40 repeat-like superfamily protein | chr3:6805798-6808374 FORWARD LENGTH=340	LOC_Os03g33580.1	protein|mitotic checkpoint protein, putative, expressed	IMGA|Medtr5g005120.1	Mitotic checkpoint protein BUB3 chr5 55763-58997 F EGN_Mt100125 20111014	GO:0000226|microtubule cytoskeleton organization GO:0007094|mitotic cell cycle spindle assembly checkpoint GO:0008150|biological_process GO:0008283|cell proliferation GO:0042023|DNA endoreduplication GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0043248|proteasome assembly GO:0051510|regulation of unidimensional cell growth GO:0051788|response to misfolded protein	GO:0000166|nucleotide binding GO:0005515|protein binding	GO:0000776|kinetochore GO:0005634|nucleus GO:0005737|cytoplasm GO:0009524|phragmoplast GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_03101	A	A1S	Potri.001G295200	Potri.001G295200(AS)	POPTR_0001s30240	sp|Q9SQK3|EM506_ARATH	Ankyrin repeat domain-containing protein EMB506, chloroplastic OS=Arabidopsis thaliana GN=EMB506 PE=1 SV=1	AT5G40160.1	| Symbols: EMB139, EMB506 | Ankyrin repeat family protein | chr5:16062726-16064301 REVERSE LENGTH=315	LOC_Os06g13000.1	protein|ankyrin repeat domain-containing protein, chloroplast precursor, putative, expressed	IMGA|Medtr5g022050.1	Ankyrin repeat domain-containing protein chr5 8396885-8392674 E EGN_Mt100125 20111014	GO:0009793|embryo development ending in seed dormancy GO:0010027|thylakoid membrane organization	GO:0005515|protein binding	GO:0005634|nucleus
pt2_03102	B	B1S	Potri.001G295300	Potri.001G295300(BS)	POPTR_0001s30250	sp|Q9XJ35|CLPR1_ARATH	ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic OS=Arabidopsis thaliana GN=CLPR1 PE=1 SV=1	AT1G49970.1	| Symbols: CLPR1, NCLPP5, SVR2 | CLP protease proteolytic subunit 1 | chr1:18501936-18504462 REVERSE LENGTH=387	LOC_Os05g51450.1	protein|OsClp8 - Putative Clp protease homologue, expressed	NA	NA	GO:0006508|proteolysis	GO:0004252|serine-type endopeptidase activity	GO:0009507|chloroplast GO:0009532|plastid stroma GO:0009534|chloroplast thylakoid GO:0009570|chloroplast stroma GO:0009840|chloroplastic endopeptidase Clp complex GO:0009941|chloroplast envelope
pt2_03103	A	A1S	Potri.001G295500	Potri.001G295500(AS)	POPTR_0001s30260	sp|Q96289|ZAT10_ARATH	Zinc finger protein ZAT10 OS=Arabidopsis thaliana GN=ZAT10 PE=2 SV=1	AT1G27730.1	| Symbols: STZ, ZAT10 | salt tolerance zinc finger | chr1:9648302-9648985 REVERSE LENGTH=227	LOC_Os03g55540.1	protein|ZOS3-18 - C2H2 zinc finger protein, expressed	IMGA|contig_55524_1.1	Zinc-finger protein contig_55524 1775-2990 F PREDN 20111014	GO:0002679|respiratory burst involved in defense response GO:0006979|response to oxidative stress GO:0007165|signal transduction GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009611|response to wounding GO:0009612|response to mechanical stimulus GO:0009620|response to fungus GO:0009644|response to high light intensity GO:0009651|response to salt stress GO:0009695|jasmonic acid biosynthetic process GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009753|response to jasmonic acid stimulus GO:0009873|ethylene mediated signaling pathway GO:0010117|photoprotection GO:0010200|response to chitin GO:0015979|photosynthesis GO:0035264|multicellular organism growth GO:0035556|intracellular signal transduction GO:0042538|hyperosmotic salinity response GO:0045892|negative regulation of transcription, DNA-dependent	GO:0003676|nucleic acid binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_03104	A	A1S	Potri.001G295600	Potri.001G295600(AS)	POPTR_0001s30270	sp|O80970|NPY2_ARATH	BTB/POZ domain-containing protein NPY2 OS=Arabidopsis thaliana GN=NPY2 PE=2 SV=1	AT2G14820.1	| Symbols: NPY2 | Phototropic-responsive NPH3 family protein | chr2:6358864-6361300 FORWARD LENGTH=634	LOC_Os12g39380.1	protein|BTBN24 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed	IMGA|Medtr5g015790.1	BTB/POZ domain-containing protein chr5 5273733-5277633 E EGN_Mt100125 20111014	GO:0009416|response to light stimulus GO:0009958|positive gravitropism	GO:0004871|signal transducer activity	GO:0005886|plasma membrane GO:0071944|cell periphery
pt2_03105	A	A1S	Potri.001G295700	Potri.001G295700(AS)	POPTR_0001s30280	sp|Q9SN23|LBD38_ARATH	LOB domain-containing protein 38 OS=Arabidopsis thaliana GN=LBD38 PE=2 SV=1	AT3G49940.1	| Symbols: LBD38 | LOB domain-containing protein 38 | chr3:18514465-18515302 FORWARD LENGTH=247	LOC_Os03g33090.1	protein|DUF260 domain containing protein, putative, expressed	IMGA|Medtr5g015880.1	LOB domain-containing protein chr5 5330428-5331438 F EGN_Mt100125 20111014	GO:0008150|biological_process GO:0010167|response to nitrate GO:0015706|nitrate transport	NA	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03106	A	A1S	Potri.001G295800	Potri.001G295800(AS)	POPTR_0001s30290	NA	NA	AT1G49890.1	| Symbols: QWRF2 | Family of unknown function (DUF566) | chr1:18470282-18473463 FORWARD LENGTH=659	LOC_Os03g10820.1	protein|expressed protein	IMGA|Medtr1g018440.1	hypothetical protein chr1 5485437-5481464 H EGN_Mt100125 20111014	NA	NA	GO:0005634|nucleus
pt2_03107	G	G1	NA	NA	POPTR_0001s30310	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03108	A	A1S	Potri.001G296000	Potri.001G296000(AS)	POPTR_0001s30320	sp|Q8GXX0|ERV1_ARATH	FAD-linked sulfhydryl oxidase ERV1 OS=Arabidopsis thaliana GN=ERV1 PE=1 SV=1	AT1G49880.1	| Symbols: Erv1 | Erv1/Alr family protein | chr1:18464081-18465914 FORWARD LENGTH=191	LOC_Os03g10850.1	protein|FAD-linked sulfhydryl oxidase ALR, putative, expressed	NA	NA	GO:0055114|oxidation-reduction process	GO:0016972|thiol oxidase activity GO:0042802|identical protein binding GO:0050660|flavin adenine dinucleotide binding	GO:0005634|nucleus GO:0005739|mitochondrion
pt2_03109	B	B1S	Potri.001G296100	Potri.001G296100(BS)	POPTR_0001s30330	sp|P37034|Y1691_LEGPH	Uncharacterized transporter lpg1691 OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=lpg1691 PE=3 SV=2	AT3G19553.1	| Symbols: | Amino acid permease family protein | chr3:6790988-6792507 REVERSE LENGTH=479	LOC_Os03g37984.2	protein|amino acid permease family protein, putative, expressed	IMGA|Medtr5g005160.1	Neutral amino acid transport protein chr5 74091-75977 E EGN_Mt100125 20111014	GO:0015846|polyamine transport GO:0015996|chlorophyll catabolic process	GO:0015203|polyamine transmembrane transporter activity GO:0015326|cationic amino acid transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_03110	B	B1S	Potri.001G296100	Potri.001G296100(BS)	POPTR_0001s30330	sp|P37034|Y1691_LEGPH	Uncharacterized transporter lpg1691 OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=lpg1691 PE=3 SV=2	AT3G19553.1	| Symbols: | Amino acid permease family protein | chr3:6790988-6792507 REVERSE LENGTH=479	LOC_Os03g37984.2	protein|amino acid permease family protein, putative, expressed	IMGA|Medtr5g005160.1	Neutral amino acid transport protein chr5 74091-75977 E EGN_Mt100125 20111014	GO:0015846|polyamine transport GO:0015996|chlorophyll catabolic process	GO:0015203|polyamine transmembrane transporter activity GO:0015326|cationic amino acid transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_03111	A	A1S	Potri.001G296100	Potri.001G296100(AS)	POPTR_0001s30330	sp|P37034|Y1691_LEGPH	Uncharacterized transporter lpg1691 OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=lpg1691 PE=3 SV=2	AT3G19553.1	| Symbols: | Amino acid permease family protein | chr3:6790988-6792507 REVERSE LENGTH=479	LOC_Os03g37984.2	protein|amino acid permease family protein, putative, expressed	IMGA|Medtr5g005160.1	Neutral amino acid transport protein chr5 74091-75977 E EGN_Mt100125 20111014	GO:0015846|polyamine transport GO:0015996|chlorophyll catabolic process	GO:0015203|polyamine transmembrane transporter activity GO:0015326|cationic amino acid transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_03112	A	A1S	Potri.001G296200	Potri.001G296200(AS)	POPTR_0001s30340	NA	NA	AT4G33890.2	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G14850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr4:16250057-16251085 FORWARD LENGTH=342	LOC_Os03g55450.2	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03113	C	C1S	Potri.001G296300	Potri.001G296300(CS)	NA	NA	AT4G33890.2	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G14850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr4:16250057-16251085 FORWARD LENGTH=342	LOC_Os03g55450.2	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03114	A	A2S	Potri.001G296400	Potri.001G296400(AS) Potri.009G090600(DS)	POPTR_0001s30360	sp|Q54FR4|PX24D_DICDI	PXMP2/4 family protein 4 OS=Dictyostelium discoideum GN=DDB_G0290631 PE=3 SV=1	AT2G14860.1	| Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein | chr2:6387820-6389563 REVERSE LENGTH=252	LOC_Os12g32330.1	protein|peroxisomal membrane protein, putative, expressed	NA	NA	GO:0008150|biological_process	NA	GO:0005778|peroxisomal membrane GO:0016021|integral to membrane
pt2_03115	A	A1S	Potri.001G296500	Potri.001G296500(AS)	POPTR_0001s30370	sp|Q9XIC7|SERK2_ARATH	Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1	AT3G43740.1	| Symbols: | Leucine-rich repeat (LRR) family protein | chr3:15644127-15645446 FORWARD LENGTH=218	LOC_Os03g32580.1	protein|BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	IMGA|Medtr5g005170.1	Somatic embryogenesis receptor kinase chr5 79137-77398 F EGN_Mt100125 20111014	GO:0007165|signal transduction	NA	GO:0005886|plasma membrane
pt2_03116	A	A2S	Potri.001G296600	Potri.001G296600(AS) Potri.009G090800(DS)	POPTR_0001s30380	sp|O64818|Y2309_ARATH	Uncharacterized protein At2g23090 OS=Arabidopsis thaliana GN=At2g23090 PE=1 SV=1	AT2G23090.1	| Symbols: | Uncharacterised protein family SERF | chr2:9829657-9830274 REVERSE LENGTH=78	LOC_Os07g02340.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_03117	A	A2S	Potri.001G296700	Potri.001G296700(AS) Potri.009G090900(DS)	POPTR_0001s30390	NA	NA	AT1G49870.1	| Symbols: | unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 6518 Blast hits to 5022 proteins in 522 species: Archae - 49; Bacteria - 635; Metazoa - 3264; Fungi - 379; Plants - 242; Viruses - 9; Other Eukaryotes - 1940 (source: NCBI BLink). | chr1:18460345-18463557 FORWARD LENGTH=828	LOC_Os03g40780.1	protein|transport protein-related, putative, expressed	NA	NA	GO:0048451|petal formation GO:0048453|sepal formation	NA	GO:0005737|cytoplasm
pt2_03118	A	A2S	Potri.001G296800	Potri.001G296800(AS) Potri.009G091000(DS)	POPTR_0001s30400	sp|P16924|P4HA1_CHICK	Prolyl 4-hydroxylase subunit alpha-1 OS=Gallus gallus GN=P4HA1 PE=1 SV=1	AT4G33910.1	| Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr4:16256943-16258614 REVERSE LENGTH=288	LOC_Os03g55380.1	protein|oxidoreductase, putative, expressed	IMGA|Medtr5g016090.1	Prolyl 4-hydroxylase subunit alpha-1 chr5 5449524-5441738 H EGN_Mt100125 20111014	GO:0018401|peptidyl-proline hydroxylation to 4-hydroxy-L-proline GO:0031348|negative regulation of defense response GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0016491|oxidoreductase activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors GO:0031418|L-ascorbic acid binding	GO:0005794|Golgi apparatus
pt2_03119	A	A2S	Potri.001G296900	Potri.001G296900(AS) Potri.009G091100(DS)	POPTR_0001s30410	NA	NA	AT3G19550.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; Has 36 Blast hits to 36 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:6787462-6788165 REVERSE LENGTH=110	LOC_Os12g32290.1	protein|expressed protein	IMGA|Medtr5g005180.1	hypothetical protein chr5 82048-82653 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_03120	A	A1S	Potri.001G297000	Potri.001G297000(AS)	POPTR_0001s30420	sp|Q4KLR8|ZNRF3_XENLA	E3 ubiquitin-protein ligase ZNRF3 OS=Xenopus laevis GN=znrf3 PE=2 SV=1	AT1G49850.1	| Symbols: | RING/U-box superfamily protein | chr1:18455326-18456444 REVERSE LENGTH=250	LOC_Os03g10890.1	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|contig_240785_1.1	RING-H2 finger protein contig_240785 183-2115 F PREDN 20111014	NA	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_03121	A	A1S	Potri.001G297100	Potri.001G297100(AS)	POPTR_0001s30430	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03122	A	A1S	Potri.001G297200	Potri.001G297200(AS)	POPTR_0001s30440	sp|O81760|P2C63_ARATH	Probable protein phosphatase 2C 63 OS=Arabidopsis thaliana GN=At4g33920 PE=1 SV=1	AT4G33920.1	| Symbols: | Protein phosphatase 2C family protein | chr4:16260876-16262703 FORWARD LENGTH=380	LOC_Os12g39120.1	protein|protein phosphatase 2C, putative, expressed	IMGA|contig_113959_1.1	Protein phosphatase 2C contig_113959 455-2236 E PREDN 20111014	GO:0006470|protein dephosphorylation GO:0006612|protein targeting to membrane GO:0006944|cellular membrane fusion GO:0010200|response to chitin GO:0010363|regulation of plant-type hypersensitive response GO:0030968|endoplasmic reticulum unfolded protein response GO:0043069|negative regulation of programmed cell death GO:0052542|defense response by callose deposition	GO:0003824|catalytic activity GO:0004722|protein serine/threonine phosphatase activity	NA
pt2_03123	A	A1S	Potri.001G297300	Potri.001G297300(AS)	POPTR_0001s30450	sp|Q9LYZ9|PP362_ARATH	Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1	AT5G02860.1	| Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr5:654102-656561 FORWARD LENGTH=819	LOC_Os07g40120.1	protein|pentatricopeptide, putative, expressed	IMGA|Medtr5g090210.1	Pentatricopeptide repeat-containing protein chr5 38260030-38262180 E EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005739|mitochondrion
pt2_03124	A	A1S	Potri.001G297400	Potri.001G297400(AS)	POPTR_0001s30460	sp|O74503|UAF30_SCHPO	Upstream activation factor subunit spp27 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=spp27 PE=1 SV=1	AT2G14880.1	| Symbols: | SWIB/MDM2 domain superfamily protein | chr2:6393686-6394841 REVERSE LENGTH=141	LOC_Os12g32280.1	protein|SWIB/MDM2 domain containing protein, expressed	IMGA|Medtr5g005200.1	Upstream activation factor subunit UAF30 chr5 87098-85438 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_03125	A	A1S	Potri.001G297500	Potri.001G297500(AS)	POPTR_0001s30470	NA	NA	AT3G19540.1	| Symbols: | Protein of unknown function (DUF620) | chr3:6780762-6782633 FORWARD LENGTH=485	LOC_Os07g40150.1	protein|expressed protein	IMGA|Medtr1g018620.1	hypothetical protein chr1 5565425-5562304 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0005886|plasma membrane
pt2_03126	R	R	NA	NA	POPTR_0001s30480	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03127	A	A1S	Potri.001G297600	Potri.001G297600(AS)	POPTR_0001s30490	NA	NA	AT4G34280.1	| Symbols: | transducin family protein / WD-40 repeat family protein | chr4:16407084-16410644 FORWARD LENGTH=783	NA	NA	NA	NA	GO:0008150|biological_process	GO:0000166|nucleotide binding	GO:0005739|mitochondrion GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_03128	A	A2S	Potri.001G297700	Potri.001G297700(AS) Potri.009G092600(DS)	POPTR_0001s30500	sp|Q948Z4|SNAK1_SOLTU	Snakin-1 OS=Solanum tuberosum GN=SN1 PE=1 SV=1	AT2G14900.1	| Symbols: | Gibberellin-regulated family protein | chr2:6404210-6405043 FORWARD LENGTH=108	LOC_Os03g55290.1	protein|GASR3 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed	IMGA|AC232874_1015.1	Snakin-1 AC232874.5 53776-55154 F EGN_Mt100125 20111014	GO:0009739|response to gibberellin stimulus	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_03129	A	A9S	Potri.001G297800	Potri.001G297800(AS) Potri.T098000(BS) Potri.018G075600(BS) Potri.014G026000(BS) Potri.003G006700(BS) Potri.017G062600(BS) Potri.001G238000(BS) Potri.017G072700(DS) Potri.001G402200(DS)	POPTR_0001s30510	NA	NA	NA	NA	LOC_Os04g16940.1	protein|transposon protein, putative, CACTA, En/Spm sub-class, expressed	IMGA|Medtr5g054570.1	PIF-like protein chr5 21936286-21937344 H EGN_Mt100125 20111014	GO:0008150|biological_process GO:0048573|photoperiodism, flowering	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_03130	A	A1S	Potri.001G297900	Potri.001G297900(AS)	POPTR_0001s30520	sp|O64628|TXND9_ARATH	Thioredoxin domain-containing protein 9 homolog OS=Arabidopsis thaliana GN=At2g18990 PE=2 SV=1	AT3G25580.1	| Symbols: | Thioredoxin superfamily protein | chr3:9292557-9294148 FORWARD LENGTH=210	LOC_Os08g15204.1	protein|thioredoxin domain-containing protein 9, putative, expressed	IMGA|contig_74789_1.1	Thioredoxin domain containing contig_74789 162-1853 F PREDN 20111014	GO:0019932|second-messenger-mediated signaling GO:0045454|cell redox homeostasis	NA	GO:0005737|cytoplasm
pt2_03131	A	A1S	Potri.001G298000	Potri.001G298000(AS)	POPTR_0001s30530	sp|Q9LVC3|PUM12_ARATH	Pumilio homolog 12 OS=Arabidopsis thaliana GN=APUM12 PE=2 SV=2	AT5G56510.1	| Symbols: APUM12, PUM12 | pumilio 12 | chr5:22881721-22883842 FORWARD LENGTH=596	LOC_Os11g37090.1	protein|pumilio-family RNA binding repeat domain containing protein, expressed	IMGA|AC232874_1016.1	Pumilio domain-containing protein AC232874.5 60725-56068 E EGN_Mt100125 20111014	NA	GO:0003723|RNA binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_03132	A	A1S	Potri.001G298100	Potri.001G298100(AS)	POPTR_0001s30535	sp|Q683I9|PP295_ARATH	Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1	AT3G62890.1	| Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr3:23246168-23247973 FORWARD LENGTH=573	LOC_Os07g09370.1	protein|pentatricopeptide, putative, expressed	IMGA|Medtr1g071240.1	Pentatricopeptide repeat-containing protein chr1 17511913-17505644 H EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_03133	A	A1S	Potri.001G298200	Potri.001G298200(AS)	POPTR_0001s30540	NA	NA	AT2G14910.1	| Symbols: | unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G14970.1); Has 605 Blast hits to 425 proteins in 102 species: Archae - 0; Bacteria - 300; Metazoa - 25; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 191 (source: NCBI BLink). | chr2:6406957-6409015 REVERSE LENGTH=386	LOC_Os03g41080.1	protein|seed maturation protein PM23, putative, expressed	NA	NA	GO:0015996|chlorophyll catabolic process	NA	GO:0009507|chloroplast
pt2_03134	G	G7	NA	NA	POPTR_0001s30550	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03135	A	A2S	Potri.001G298300	Potri.001G298300(AS) Potri.009G092900(DS)	POPTR_0001s30560	sp|O82333|GH31_ARATH	Probable indole-3-acetic acid-amido synthetase GH3.1 OS=Arabidopsis thaliana GN=GH3.1 PE=2 SV=1	AT2G14960.1	| Symbols: GH3.1 | Auxin-responsive GH3 family protein | chr2:6451659-6453670 REVERSE LENGTH=590	LOC_Os07g40290.1	protein|OsGH3.8 - Probable indole-3-acetic acid-amido synthetase, expressed	IMGA|Medtr5g016320.1	Indole-3-acetic acid-amido synthetase GH3.3 chr5 5576809-5574506 F EGN_Mt100125 20111014	GO:0009733|response to auxin stimulus GO:0009741|response to brassinosteroid stimulus GO:0010583|response to cyclopentenone	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_03136	A	A1S	Potri.001G298400	Potri.001G298400(AS)	POPTR_0001s30570	sp|Q04996|HAT31_ARATH	Homeobox protein HAT3.1 OS=Arabidopsis thaliana GN=HAT3.1 PE=2 SV=3	AT3G19510.1	| Symbols: HAT3.1 | Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain | chr3:6763205-6766049 REVERSE LENGTH=723	LOC_Os06g12400.1	protein|Homeobox domain containing protein, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0008284|positive regulation of cell proliferation GO:0009560|embryo sac egg cell differentiation GO:0043687|post-translational protein modification GO:0045893|positive regulation of transcription, DNA-dependent GO:0051276|chromosome organization	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_03137	A	A1S	Potri.001G298500	Potri.001G298500(AS)	POPTR_0001s30580	sp|Q54MI6|TIPRL_DICDI	TIP41-like protein OS=Dictyostelium discoideum GN=tiprl PE=3 SV=1	AT4G34270.1	| Symbols: | TIP41-like family protein | chr4:16404138-16406153 REVERSE LENGTH=290	LOC_Os03g55270.1	protein|TIP41, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_03138	A	A1S	Potri.001G298700	Potri.001G298700(AS)	POPTR_0001s30590	sp|Q39266|ZFP7_ARATH	Zinc finger protein 7 OS=Arabidopsis thaliana GN=ZFP7 PE=2 SV=1	AT1G24625.1	| Symbols: ZFP7 | zinc finger protein 7 | chr1:8726009-8726638 REVERSE LENGTH=209	LOC_Os12g39220.1	protein|ZOS12-08 - C2H2 zinc finger protein, expressed	IMGA|Medtr5g077370.1	Zinc finger protein chr5 32033659-32032815 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003676|nucleic acid binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding GO:0046982|protein heterodimerization activity	GO:0005622|intracellular GO:0005634|nucleus
pt2_03139	A	A1S	Potri.001G298800	Potri.001G298800(AS)	POPTR_0001s30600	NA	NA	AT2G15000.5	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34265.2); Has 80 Blast hits to 80 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:6481839-6482316 REVERSE LENGTH=101	NA	NA	NA	NA	GO:0008150|biological_process GO:0009220|pyrimidine ribonucleotide biosynthetic process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_03140	A	A1S	Potri.001G298900	Potri.001G298900(AS)	POPTR_0001s30610	sp|Q8L7W8|FUCO2_ARATH	Alpha-L-fucosidase 2 OS=Arabidopsis thaliana GN=At4g34260 PE=2 SV=1	AT4G34260.1	| Symbols: FUC95A | 1,2-alpha-L-fucosidases | chr4:16398130-16401591 FORWARD LENGTH=843	LOC_Os10g19880.1	protein|alpha-1,2-fucosidase, putative, expressed	NA	NA	NA	GO:0003824|catalytic activity GO:0004560|alpha-L-fucosidase activity GO:0047513|1,2-alpha-L-fucosidase activity	GO:0005576|extracellular region
pt2_03141	A	A1S	Potri.001G299000	Potri.001G299000(AS)	POPTR_0001s30620	sp|Q8L7W8|FUCO2_ARATH	Alpha-L-fucosidase 2 OS=Arabidopsis thaliana GN=At4g34260 PE=2 SV=1	AT4G34260.1	| Symbols: FUC95A | 1,2-alpha-L-fucosidases | chr4:16398130-16401591 FORWARD LENGTH=843	LOC_Os10g19880.1	protein|alpha-1,2-fucosidase, putative, expressed	NA	NA	NA	GO:0003824|catalytic activity GO:0004560|alpha-L-fucosidase activity GO:0047513|1,2-alpha-L-fucosidase activity	GO:0005576|extracellular region
pt2_03142	G	G1	NA	NA	POPTR_0001s30630	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03143	B	B3S	Potri.014G092000	Potri.014G092000(BS) Potri.005G163100(DS) Potri.018G075700(DS)	POPTR_0001s30640	NA	NA	AT5G41980.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:16793765-16794889 FORWARD LENGTH=374	ChrUn.fgenesh.mRNA.24	protein|hypothetical protein	IMGA|Medtr1g059320.1	hypothetical protein chr1 15361664-15360985 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03144	A	A8S	Potri.001G299100	Potri.001G299100(AS) Potri.005G153700(BS) Potri.004G097600(BS) Potri.008G176600(BS) Potri.001G182200(BS) Potri.015G012100(BS) Potri.001G393500(DS) Potri.001G256500(DS)	POPTR_0001s30650	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03145	A	A1S	Potri.001G299200	Potri.001G299200(AS)	POPTR_0001s30660	sp|Q1G3M2|U631_ARATH	UPF0631 protein At3g19508 OS=Arabidopsis thaliana GN=At3g19508 PE=3 SV=1	AT3G19508.1	| Symbols: | unknown protein; LOCATED IN: mitochondrion; Has 34 Blast hits to 34 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:6762378-6762696 REVERSE LENGTH=81	LOC_Os01g24020.1	protein|expressed protein	NA	NA	NA	NA	NA
pt2_03146	A	A1S	Potri.001G299300	Potri.001G299300(AS)	POPTR_0001s30670	sp|Q9LT67|BH113_ARATH	Transcription factor bHLH113 OS=Arabidopsis thaliana GN=BHLH113 PE=2 SV=1	AT3G19500.1	| Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr3:6759289-6760893 REVERSE LENGTH=270	LOC_Os04g41570.1	protein|ethylene-responsive protein related, putative, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_03147	A	A2S	Potri.001G299400	Potri.001G299400(AS) Potri.001G299500(BS)	POPTR_0001s30680	NA	NA	AT2G15220.1	| Symbols: | Plant basic secretory protein (BSP) family protein | chr2:6608689-6609366 FORWARD LENGTH=225	LOC_Os10g34920.1	protein|secretory protein, putative, expressed	IMGA|contig_131365_1.1	PBSP domain-containing protein contig_131365 1302-9 H PREDN 20111014	GO:0006952|defense response	NA	GO:0005576|extracellular region
pt2_03148	A	A2S	Potri.001G299500	Potri.001G299500(AS) Potri.001G299400(BS)	POPTR_0001s30690	NA	NA	AT2G15220.1	| Symbols: | Plant basic secretory protein (BSP) family protein | chr2:6608689-6609366 FORWARD LENGTH=225	LOC_Os10g34920.1	protein|secretory protein, putative, expressed	IMGA|contig_131365_1.1	PBSP domain-containing protein contig_131365 1302-9 H PREDN 20111014	GO:0006952|defense response	NA	GO:0005576|extracellular region
pt2_03149	B	B1S	Potri.001G299600	Potri.001G299600(BS)	POPTR_0001s30700	NA	NA	AT2G15220.1	| Symbols: | Plant basic secretory protein (BSP) family protein | chr2:6608689-6609366 FORWARD LENGTH=225	LOC_Os10g34920.1	protein|secretory protein, putative, expressed	IMGA|contig_131365_1.1	PBSP domain-containing protein contig_131365 1302-9 H PREDN 20111014	GO:0006952|defense response	NA	GO:0005576|extracellular region
pt2_03150	A	A1S	Potri.001G299700	Potri.001G299700(AS)	POPTR_0001s30710	sp|Q9C6D2|MTK_ARATH	Methylthioribose kinase OS=Arabidopsis thaliana GN=MTK PE=1 SV=1	AT1G49820.1	| Symbols: ATMTK, MTK | S-methyl-5-thioribose kinase | chr1:18443005-18444907 FORWARD LENGTH=420	LOC_Os04g57400.1	protein|methylthioribose kinase, putative, expressed	NA	NA	GO:0009086|methionine biosynthetic process GO:0019509|L-methionine salvage from methylthioadenosine GO:0071281|cellular response to iron ion GO:0071369|cellular response to ethylene stimulus GO:0071732|cellular response to nitric oxide	GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0042802|identical protein binding GO:0046522|S-methyl-5-thioribose kinase activity	GO:0005829|cytosol
pt2_03151	A	A1S	Potri.001G299800	Potri.001G299800(AS)	POPTR_0001s30720	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_03152	A	A1S	Potri.001G299900	Potri.001G299900(AS)	POPTR_0001s30725	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_03153	C	C1S	Potri.001G300000	Potri.001G300000(CS)	sp|P31657|CADH_POPDE	Probable cinnamyl alcohol dehydrogenase OS=Populus deltoides PE=2 SV=2	AT4G34230.1	| Symbols: CAD5, ATCAD5, CAD-5 | cinnamyl alcohol dehydrogenase 5 | chr4:16386898-16388666 REVERSE LENGTH=357	LOC_Os02g09490.1	protein|dehydrogenase, putative, expressed	IMGA|Medtr5g031360.1	Cinnamyl alcohol dehydrogenase chr5 13022161-13019893 F EGN_Mt100125 20111014	GO:0006612|protein targeting to membrane GO:0006865|amino acid transport GO:0009611|response to wounding GO:0009805|coumarin biosynthetic process GO:0009809|lignin biosynthetic process GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010363|regulation of plant-type hypersensitive response GO:0015824|proline transport GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0008270|zinc ion binding GO:0016491|oxidoreductase activity GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups GO:0045551|cinnamyl-alcohol dehydrogenase activity	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_03154	A	A2S	Potri.001G300100	Potri.001G300100(AS) Potri.009G095900(DS)	POPTR_0001s30740	sp|Q54DD7|UNC50_DICDI	Protein unc-50 homolog OS=Dictyostelium discoideum GN=DDB_G0292320 PE=3 SV=1	AT2G15240.1	| Symbols: | UNC-50 family protein | chr2:6615980-6618862 REVERSE LENGTH=252	LOC_Os09g02170.1	protein|unc-50, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_03155	A	A1S	Potri.001G300200	Potri.001G300200(AS)	POPTR_0001s30750	sp|Q9FDW1|MYB44_ARATH	Transcription factor MYB44 OS=Arabidopsis thaliana GN=MYB44 PE=2 SV=1	AT4G37260.1	| Symbols: MYB73, ATMYB73 | myb domain protein 73 | chr4:17540602-17541564 FORWARD LENGTH=320	LOC_Os02g09480.1	protein|myb-like DNA-binding domain containing protein, putative, expressed	IMGA|Medtr5g016510.1	R2R3-MYB transcription factor chr5 5667229-5666279 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009723|response to ethylene stimulus GO:0009737|response to abscisic acid stimulus GO:0009751|response to salicylic acid stimulus GO:0009753|response to jasmonic acid stimulus GO:0010200|response to chitin GO:0046686|response to cadmium ion	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_03156	B	B1S	Potri.001G300300	Potri.001G300300(BS)	POPTR_0001s30760	NA	NA	AT2G15270.1	| Symbols: | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1168 (InterPro:IPR009548); Has 1930 Blast hits to 1364 proteins in 219 species: Archae - 0; Bacteria - 44; Metazoa - 762; Fungi - 280; Plants - 96; Viruses - 3; Other Eukaryotes - 745 (source: NCBI BLink). | chr2:6637967-6639252 FORWARD LENGTH=194	LOC_Os09g01690.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_03157	A	A1S	Potri.001G300400	Potri.001G300400(AS)	POPTR_0001s30770	sp|Q9LT71|RTNLK_ARATH	Reticulon-like protein B11 OS=Arabidopsis thaliana GN=RTNLB11 PE=2 SV=1	AT3G19460.1	| Symbols: | Reticulon family protein | chr3:6747600-6748904 FORWARD LENGTH=200	LOC_Os04g57420.1	protein|reticulon domain containing protein, putative, expressed	IMGA|Medtr5g090340.3	Reticulon-like protein B8 chr5 38304798-38301150 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005783|endoplasmic reticulum
pt2_03158	A	A2S	Potri.001G300500	Potri.001G300500(AS) Potri.009G096300(DS)	POPTR_0001s30780	sp|Q9SHU7|TIC21_ARATH	Protein TIC 21, chloroplastic OS=Arabidopsis thaliana GN=TIC21 PE=1 SV=1	AT2G15290.1	| Symbols: ATTIC21, TIC21, CIA5, PIC1 | translocon at inner membrane of chloroplasts 21 | chr2:6642512-6644011 REVERSE LENGTH=296	LOC_Os06g43130.1	protein|tic21, putative, expressed	NA	NA	GO:0006875|cellular metal ion homeostasis GO:0045037|protein import into chloroplast stroma	GO:0005381|iron ion transmembrane transporter activity GO:0015088|copper uptake transmembrane transporter activity GO:0042803|protein homodimerization activity	GO:0009507|chloroplast GO:0009706|chloroplast inner membrane GO:0009941|chloroplast envelope GO:0031897|Tic complex
pt2_03159	A	A1S	Potri.001G300600	Potri.001G300600(AS)	POPTR_0001s30790	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03160	A	A1S	Potri.001G300700	Potri.001G300700(AS)	POPTR_0001s30800	sp|Q94C77|RPKL_ARATH	Receptor protein kinase-like protein At4g34220 OS=Arabidopsis thaliana GN=At4g34220 PE=2 SV=1	AT4G34220.1	| Symbols: | Leucine-rich repeat protein kinase family protein | chr4:16381653-16384054 REVERSE LENGTH=757	LOC_Os09g02250.1	protein|transposon protein, putative, unclassified, expressed	IMGA|contig_54099_1.1	S-receptor kinase-like protein contig_54099 3348-562 H PREDN 20111014	GO:0006468|protein phosphorylation GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	NA
pt2_03161	A	A1S	Potri.001G300800	Potri.001G300800(AS)	POPTR_0001s30810	sp|Q8L9J9|CAES_ARATH	Probable carbohydrate esterase At4g34215 OS=Arabidopsis thaliana GN=At4g34215 PE=1 SV=2	AT4G34215.2	| Symbols: | Domain of unknown function (DUF303) | chr4:16380203-16381192 REVERSE LENGTH=260	LOC_Os04g20810.1	protein|receptor protein kinase, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0016787|hydrolase activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03162	A	A2S	Potri.001G300900	Potri.001G300900(AS) Potri.009G096600(DS)	POPTR_0001s30820	sp|O04130|SERA_ARATH	D-3-phosphoglycerate dehydrogenase, chloroplastic OS=Arabidopsis thaliana GN=At1g17745 PE=1 SV=2	AT4G34200.1	| Symbols: EDA9 | D-3-phosphoglycerate dehydrogenase | chr4:16374041-16376561 REVERSE LENGTH=603	LOC_Os04g55720.1	protein|D-3-phosphoglycerate dehydrogenase, chloroplast precursor, putative, expressed	NA	NA	GO:0006564|L-serine biosynthetic process GO:0008152|metabolic process GO:0009561|megagametogenesis GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0004617|phosphoglycerate dehydrogenase activity GO:0005524|ATP binding GO:0016597|amino acid binding GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0048037|cofactor binding GO:0051287|NAD binding	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009536|plastid GO:0009570|chloroplast stroma GO:0016020|membrane
pt2_03163	A	A1S	Potri.001G301000	Potri.001G301000(AS)	POPTR_0001s30830	NA	NA	AT3G19490.1	| Symbols: ATNHD1, NHD1 | sodium:hydrogen antiporter 1 | chr3:6754875-6758127 REVERSE LENGTH=576	LOC_Os09g02214.1	protein|Citrate transporter protein, putative, expressed	NA	NA	GO:0006814|sodium ion transport GO:0006848|pyruvate transport GO:0015746|citrate transport GO:0035725|sodium ion transmembrane transport GO:0055085|transmembrane transport	GO:0015137|citrate transmembrane transporter activity GO:0015385|sodium:hydrogen antiporter activity GO:0015386|potassium:hydrogen antiporter activity GO:0050833|pyruvate transmembrane transporter activity	GO:0009507|chloroplast GO:0016021|integral to membrane
pt2_03164	A	A1S	Potri.001G301100	Potri.001G301100(AS)	POPTR_0001s30840	NA	NA	AT4G34190.1	| Symbols: SEP1 | stress enhanced protein 1 | chr4:16372606-16373511 REVERSE LENGTH=146	LOC_Os10g25570.2	protein|expressed protein	NA	NA	GO:0006098|pentose-phosphate shunt GO:0006364|rRNA processing GO:0009637|response to blue light GO:0009644|response to high light intensity GO:0009657|plastid organization GO:0009744|response to sucrose stimulus GO:0009773|photosynthetic electron transport in photosystem I GO:0010114|response to red light GO:0010155|regulation of proton transport GO:0010207|photosystem II assembly GO:0010218|response to far red light GO:0015995|chlorophyll biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway	GO:0016168|chlorophyll binding	GO:0009535|chloroplast thylakoid membrane
pt2_03165	A	A1S	Potri.001G301200	Potri.001G301200(AS)	POPTR_0001s30850	sp|P51823|ARF2_ORYSJ	ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica GN=ARF PE=2 SV=2	AT3G62290.3	| Symbols: ARFA1E | ADP-ribosylation factor A1E | chr3:23052287-23053545 FORWARD LENGTH=181	LOC_Os05g41060.1	protein|ADP-ribosylation factor, putative, expressed	IMGA|Medtr5g016540.1	ADP-ribosylation factor chr5 5681929-5683091 F EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0006886|intracellular protein transport GO:0007264|small GTPase mediated signal transduction GO:0015031|protein transport	GO:0005525|GTP binding GO:0016004|phospholipase activator activity	GO:0005622|intracellular GO:0005773|vacuole GO:0005794|Golgi apparatus GO:0009506|plasmodesma
pt2_03166	A	A1S	Potri.001G301200	Potri.001G301200(AS)	POPTR_0001s30860	sp|P51823|ARF2_ORYSJ	ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica GN=ARF PE=2 SV=2	AT3G62290.3	| Symbols: ARFA1E | ADP-ribosylation factor A1E | chr3:23052287-23053545 FORWARD LENGTH=181	LOC_Os05g41060.1	protein|ADP-ribosylation factor, putative, expressed	IMGA|Medtr5g016540.1	ADP-ribosylation factor chr5 5681929-5683091 F EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0006886|intracellular protein transport GO:0007264|small GTPase mediated signal transduction GO:0015031|protein transport	GO:0005525|GTP binding GO:0016004|phospholipase activator activity	GO:0005622|intracellular GO:0005773|vacuole GO:0005794|Golgi apparatus GO:0009506|plasmodesma
pt2_03167	A	A1S	Potri.001G301300	Potri.001G301300(AS)	POPTR_0001s30870	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_03168	A	A1S	Potri.001G301400	Potri.001G301400(AS)	POPTR_0001s30880	sp|C0LGT6|EFR_ARATH	LRR receptor-like serine/threonine-protein kinase EFR OS=Arabidopsis thaliana GN=EFR PE=1 SV=1	AT2G15320.1	| Symbols: | Leucine-rich repeat (LRR) family protein | chr2:6666527-6667675 REVERSE LENGTH=382	LOC_Os02g43250.1	protein|receptor-like protein kinase precursor, putative, expressed	IMGA|Medtr5g021290.1	Leucine-rich repeat receptor protein kinase EXS chr5 7953920-7955564 F EGN_Mt100125 20111014	GO:0007165|signal transduction	NA	GO:0005886|plasma membrane
pt2_03169	R	R	NA	NA	POPTR_0001s30890	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03170	A	A1S	Potri.001G301600	Potri.001G301600(AS)	POPTR_0001s30900	sp|Q2N5X0|KYNB_ERYLH	Kynurenine formamidase OS=Erythrobacter litoralis (strain HTCC2594) GN=kynB PE=3 SV=1	AT4G35220.1	| Symbols: | Cyclase family protein | chr4:16752636-16753966 FORWARD LENGTH=272	LOC_Os08g23100.2	protein|cyclase family protein, putative, expressed	IMGA|contig_84773_1.1	Cyclase-like protein contig_84773 1630-75 H PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005783|endoplasmic reticulum GO:0005794|Golgi apparatus GO:0009507|chloroplast
pt2_03171	A	A1S	Potri.001G301700	Potri.001G301700(AS)	POPTR_0001s30910	sp|Q2N5X0|KYNB_ERYLH	Kynurenine formamidase OS=Erythrobacter litoralis (strain HTCC2594) GN=kynB PE=3 SV=1	AT4G35220.1	| Symbols: | Cyclase family protein | chr4:16752636-16753966 FORWARD LENGTH=272	LOC_Os08g23100.2	protein|cyclase family protein, putative, expressed	IMGA|contig_84773_1.1	Cyclase-like protein contig_84773 1630-75 H PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005783|endoplasmic reticulum GO:0005794|Golgi apparatus GO:0009507|chloroplast
pt2_03172	A	A1S	Potri.001G301800	Potri.001G301800(AS)	POPTR_0001s30920	sp|P42753|CCD31_ARATH	Cyclin-D3-1 OS=Arabidopsis thaliana GN=CYCD3-1 PE=1 SV=3	AT4G34160.1	| Symbols: CYCD3;1, CYCD3 | CYCLIN D3;1 | chr4:16357903-16359304 FORWARD LENGTH=376	LOC_Os09g29100.1	protein|cyclin, putative, expressed	IMGA|Medtr5g035360.1	Cyclin-D1-1 chr5 14950752-14954149 F EGN_Mt100125 20111014	GO:0000280|nuclear division GO:0006275|regulation of DNA replication GO:0009735|response to cytokinin stimulus GO:0009741|response to brassinosteroid stimulus GO:0009744|response to sucrose stimulus GO:0010075|regulation of meristem growth GO:0010103|stomatal complex morphogenesis GO:0010389|regulation of G2/M transition of mitotic cell cycle GO:0010583|response to cyclopentenone GO:0042023|DNA endoreduplication GO:0042127|regulation of cell proliferation GO:0048316|seed development GO:0051225|spindle assembly GO:0051726|regulation of cell cycle	GO:0005515|protein binding GO:0016538|cyclin-dependent protein kinase regulator activity	GO:0005634|nucleus
pt2_03173	A	A1S	Potri.001G301900	Potri.001G301900(AS)	POPTR_0001s30930	NA	NA	AT4G34150.1	| Symbols: | Calcium-dependent lipid-binding (CaLB domain) family protein | chr4:16355035-16356955 FORWARD LENGTH=247	LOC_Os06g43190.1	protein|retrotransposon protein, putative, unclassified, expressed	IMGA|Medtr1g008950.1	Elicitor-responsive protein chr1 1720563-1723469 E EGN_Mt100125 20111014	GO:0006612|protein targeting to membrane GO:0006944|cellular membrane fusion GO:0009409|response to cold GO:0009611|response to wounding GO:0009612|response to mechanical stimulus GO:0009646|response to absence of light GO:0010200|response to chitin GO:0010363|regulation of plant-type hypersensitive response GO:0030968|endoplasmic reticulum unfolded protein response GO:0043069|negative regulation of programmed cell death GO:0052542|defense response by callose deposition	NA	GO:0005829|cytosol GO:0009506|plasmodesma
pt2_03174	A	A1S	Potri.001G302000	Potri.001G302000(AS)	POPTR_0001s30940	sp|Q9PUT6|PTEN_XENLA	Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN OS=Xenopus laevis GN=pten PE=2 SV=1	AT3G19420.1	| Symbols: ATPEN2, PEN2 | PTEN 2 | chr3:6731824-6735354 FORWARD LENGTH=611	LOC_Os12g21890.1	protein|PTEN, putative, expressed	IMGA|Medtr5g016550.1	"Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN" chr5 5689197-5684207 H EGN_Mt100125 20111014	GO:0006944|cellular membrane fusion GO:0007243|intracellular protein kinase cascade GO:0035335|peptidyl-tyrosine dephosphorylation GO:0043407|negative regulation of MAP kinase activity GO:0046856|phosphatidylinositol dephosphorylation GO:0048193|Golgi vesicle transport	GO:0052866|phosphatidylinositol phosphate phosphatase activity GO:0070300|phosphatidic acid binding	GO:0005829|cytosol
pt2_03175	A	A1S	Potri.001G302100	Potri.001G302100(AS)	POPTR_0001s30950	sp|P43297|RD21A_ARATH	Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1	AT1G47128.1	| Symbols: RD21, RD21A | Granulin repeat cysteine protease family protein | chr1:17283139-17285609 REVERSE LENGTH=462	LOC_Os04g57440.1	protein|oryzain beta chain precursor, putative, expressed	IMGA|Medtr1g018840.2	Cysteine proteinase chr1 5706940-5702641 F EGN_Mt100125 20111014	GO:0006096|glycolysis GO:0006508|proteolysis GO:0006833|water transport GO:0006972|hyperosmotic response GO:0007030|Golgi organization GO:0009266|response to temperature stimulus GO:0009414|response to water deprivation GO:0009651|response to salt stress GO:0015996|chlorophyll catabolic process GO:0042744|hydrogen peroxide catabolic process GO:0046686|response to cadmium ion GO:0050832|defense response to fungus	GO:0005515|protein binding GO:0008233|peptidase activity GO:0008234|cysteine-type peptidase activity	GO:0005576|extracellular region GO:0005773|vacuole GO:0009506|plasmodesma GO:0009507|chloroplast GO:0048046|apoplast
pt2_03176	A	A1S	Potri.001G302200	Potri.001G302200(AS)	POPTR_0001s30960	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03177	A	A1S	Potri.001G302300	Potri.001G302300(AS)	POPTR_0001s30970	sp|Q2V6J9|UFOG7_FRAAN	UDP-glucose flavonoid 3-O-glucosyltransferase 7 OS=Fragaria ananassa GN=GT7 PE=1 SV=1	AT4G34131.1	| Symbols: UGT73B3 | UDP-glucosyl transferase 73B3 | chr4:16343268-16344713 REVERSE LENGTH=481	LOC_Os01g08090.1	 protein|flavonol-3-O-glycoside-7-O-glucosyltransferase 1, putative, expressed	IMGA|Medtr5g016660.1	Anthocyanin 3'-O-beta-glucosyltransferase chr5 5738929-5737260 H EGN_Mt100125 20111014	GO:0008152|metabolic process GO:0051707|response to other organism	GO:0008194|UDP-glycosyltransferase activity GO:0016758|transferase activity, transferring hexosyl groups GO:0035251|UDP-glucosyltransferase activity GO:0080043|quercetin 3-O-glucosyltransferase activity	NA
pt2_03178	A	A1S	Potri.001G302400	Potri.001G302400(AS)	POPTR_0001s30980	sp|Q2V6J9|UFOG7_FRAAN	UDP-glucose flavonoid 3-O-glucosyltransferase 7 OS=Fragaria ananassa GN=GT7 PE=1 SV=1	AT2G15480.1	| Symbols: UGT73B5 | UDP-glucosyl transferase 73B5 | chr2:6758817-6760452 FORWARD LENGTH=484	LOC_Os01g41430.1	protein|UDP-glucoronosyl and UDP-glucosyl transferase, putative, expressed	IMGA|contig_14068_1.1	UDP-glucosyltransferase family 1 protein contig_14068 1841-243 E PREDN 20111014	GO:0008152|metabolic process GO:0009407|toxin catabolic process GO:0009723|response to ethylene stimulus GO:0010583|response to cyclopentenone GO:0051707|response to other organism	GO:0008194|UDP-glycosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups GO:0035251|UDP-glucosyltransferase activity GO:0080043|quercetin 3-O-glucosyltransferase activity GO:0080044|quercetin 7-O-glucosyltransferase activity	GO:0005829|cytosol
pt2_03179	A	A1S	Potri.001G302500	Potri.001G302500(AS)	POPTR_0001s30990	sp|Q8W3M4|Y4744_ARATH	Uncharacterized protein At4g06744 OS=Arabidopsis thaliana GN=At4g06744 PE=2 SV=1	AT4G06744.1	| Symbols: | Leucine-rich repeat (LRR) family protein | chr4:4070870-4072084 REVERSE LENGTH=404	LOC_Os04g57430.1	protein|uncharacterized protein At4g06744 precursor, putative, expressed	IMGA|Medtr1g018910.1	hypothetical protein chr1 5728549-5727273 E EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005576|extracellular region
pt2_03180	A	A1S	Potri.001G302600	Potri.001G302600(AS)	POPTR_0001s31000	NA	NA	AT5G67210.1	| Symbols: | Protein of unknown function (DUF579) | chr5:26819019-26819972 FORWARD LENGTH=317	LOC_Os06g47310.1	protein|plant-specific domain TIGR01627 family protein, expressed	IMGA|contig_60423_1.1	Expressed protein contig_60423 1771-198 F PREDN 20111014	GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process	GO:0003674|molecular_function	GO:0005794|Golgi apparatus
pt2_03181	R	R	NA	NA	POPTR_0001s31010	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03182	C	C1S	Potri.001G302900	Potri.001G302900(CS)	sp|Q9ZQG4|U73B5_ARATH	UDP-glycosyltransferase 73B5 OS=Arabidopsis thaliana GN=UGT73B5 PE=2 SV=1	AT2G15490.3	| Symbols: UGT73B4 | UDP-glycosyltransferase 73B4 | chr2:6761750-6763398 FORWARD LENGTH=481	LOC_Os02g11700.1	protein|cytokinin-O-glucosyltransferase 3, putative, expressed	IMGA|contig_14068_1.1	UDP-glucosyltransferase family 1 protein contig_14068 1841-243 E PREDN 20111014	GO:0008152|metabolic process GO:0009407|toxin catabolic process GO:0009723|response to ethylene stimulus GO:0010583|response to cyclopentenone GO:0051707|response to other organism	GO:0008194|UDP-glycosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups GO:0035251|UDP-glucosyltransferase activity GO:0080043|quercetin 3-O-glucosyltransferase activity GO:0080044|quercetin 7-O-glucosyltransferase activity	GO:0005829|cytosol
pt2_03183	A	A2S	Potri.001G303000	Potri.001G303000(AS) Potri.001G303600(BS)	POPTR_0001s31040	sp|Q2V6J9|UFOG7_FRAAN	UDP-glucose flavonoid 3-O-glucosyltransferase 7 OS=Fragaria ananassa GN=GT7 PE=1 SV=1	AT4G34131.1	| Symbols: UGT73B3 | UDP-glucosyl transferase 73B3 | chr4:16343268-16344713 REVERSE LENGTH=481	LOC_Os01g45140.1	protein|anthocyanin 3-O-beta-glucosyltransferase, putative, expressed	IMGA|Medtr5g016660.1	Anthocyanin 3'-O-beta-glucosyltransferase chr5 5738929-5737260 H EGN_Mt100125 20111014	GO:0008152|metabolic process GO:0051707|response to other organism	GO:0008194|UDP-glycosyltransferase activity GO:0016758|transferase activity, transferring hexosyl groups GO:0035251|UDP-glucosyltransferase activity GO:0080043|quercetin 3-O-glucosyltransferase activity	NA
pt2_03184	A	A3S	Potri.001G303100	Potri.001G303100(AS) Potri.001G303700(BS) Potri.001G303300(BS)	POPTR_0001s31050	sp|Q9ZQG4|U73B5_ARATH	UDP-glycosyltransferase 73B5 OS=Arabidopsis thaliana GN=UGT73B5 PE=2 SV=1	AT2G15480.1	| Symbols: UGT73B5 | UDP-glucosyl transferase 73B5 | chr2:6758817-6760452 FORWARD LENGTH=484	LOC_Os01g08110.1	 protein|flavonol-3-O-glycoside-7-O-glucosyltransferase 1, putative, expressed	IMGA|contig_14068_1.1	UDP-glucosyltransferase family 1 protein contig_14068 1841-243 E PREDN 20111014	GO:0008152|metabolic process GO:0009407|toxin catabolic process GO:0009723|response to ethylene stimulus GO:0010583|response to cyclopentenone GO:0051707|response to other organism	GO:0008194|UDP-glycosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups GO:0035251|UDP-glucosyltransferase activity GO:0080043|quercetin 3-O-glucosyltransferase activity	NA
pt2_03185	R	R	NA	NA	POPTR_0001s31060	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03186	C	C1A	Potri.001G303100	Potri.001G303100(CA)	sp|Q9ZQG4|U73B5_ARATH	UDP-glycosyltransferase 73B5 OS=Arabidopsis thaliana GN=UGT73B5 PE=2 SV=1	AT2G15480.1	| Symbols: UGT73B5 | UDP-glucosyl transferase 73B5 | chr2:6758817-6760452 FORWARD LENGTH=484	LOC_Os01g08110.1	 protein|flavonol-3-O-glycoside-7-O-glucosyltransferase 1, putative, expressed	IMGA|contig_14068_1.1	UDP-glucosyltransferase family 1 protein contig_14068 1841-243 E PREDN 20111014	GO:0008152|metabolic process GO:0009407|toxin catabolic process GO:0009723|response to ethylene stimulus GO:0010583|response to cyclopentenone GO:0051707|response to other organism	GO:0008194|UDP-glycosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups GO:0035251|UDP-glucosyltransferase activity GO:0080043|quercetin 3-O-glucosyltransferase activity	NA
pt2_03187	A	A1S	Potri.001G303200	Potri.001G303200(AS)	POPTR_0001s31080	sp|Q9ZQG4|U73B5_ARATH	UDP-glycosyltransferase 73B5 OS=Arabidopsis thaliana GN=UGT73B5 PE=2 SV=1	AT2G15480.1	| Symbols: UGT73B5 | UDP-glucosyl transferase 73B5 | chr2:6758817-6760452 FORWARD LENGTH=484	LOC_Os01g08110.1	 protein|flavonol-3-O-glycoside-7-O-glucosyltransferase 1, putative, expressed	IMGA|contig_237741_1.1	UDP-glucosyltransferase HvUGT5876 contig_237741 1-958 E PREDN 20111014	GO:0008152|metabolic process GO:0009407|toxin catabolic process GO:0009723|response to ethylene stimulus GO:0010583|response to cyclopentenone GO:0051707|response to other organism	GO:0008194|UDP-glycosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups GO:0035251|UDP-glucosyltransferase activity GO:0080043|quercetin 3-O-glucosyltransferase activity	NA
pt2_03188	A	A4S	Potri.001G303700	Potri.001G303700(AS) Potri.001G303200(AS) Potri.001G303300(AS) Potri.001G303100(DS)	POPTR_0001s31090	sp|Q8W491|U73B3_ARATH	UDP-glycosyltransferase 73B3 OS=Arabidopsis thaliana GN=UGT73B3 PE=2 SV=1	AT4G34131.1	| Symbols: UGT73B3 | UDP-glucosyl transferase 73B3 | chr4:16343268-16344713 REVERSE LENGTH=481	LOC_Os01g08110.1	 protein|flavonol-3-O-glycoside-7-O-glucosyltransferase 1, putative, expressed	IMGA|contig_14068_1.1	UDP-glucosyltransferase family 1 protein contig_14068 1841-243 E PREDN 20111014	GO:0008152|metabolic process GO:0009407|toxin catabolic process GO:0009723|response to ethylene stimulus GO:0010583|response to cyclopentenone GO:0051707|response to other organism	GO:0008194|UDP-glycosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups GO:0035251|UDP-glucosyltransferase activity GO:0080043|quercetin 3-O-glucosyltransferase activity	NA
pt2_03189	A	A1S	Potri.001G303400	Potri.001G303400(AS)	POPTR_0001s31100	sp|Q8W3P8|AOG_PHAAN	Abscisate beta-glucosyltransferase OS=Phaseolus angularis GN=AOG PE=1 SV=1	AT2G15490.3	| Symbols: UGT73B4 | UDP-glycosyltransferase 73B4 | chr2:6761750-6763398 FORWARD LENGTH=481	LOC_Os01g08110.1	 protein|flavonol-3-O-glycoside-7-O-glucosyltransferase 1, putative, expressed	IMGA|contig_14068_1.1	UDP-glucosyltransferase family 1 protein contig_14068 1841-243 E PREDN 20111014	GO:0008152|metabolic process GO:0009407|toxin catabolic process GO:0009723|response to ethylene stimulus GO:0010583|response to cyclopentenone GO:0051707|response to other organism	GO:0008194|UDP-glycosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups GO:0035251|UDP-glucosyltransferase activity GO:0080043|quercetin 3-O-glucosyltransferase activity GO:0080044|quercetin 7-O-glucosyltransferase activity	GO:0005829|cytosol
pt2_03190	R	R	NA	NA	POPTR_0001s31105	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03191	A	A2S	Potri.001G303500	Potri.001G303500(AS) Potri.001G303800(BS)	POPTR_0001s31110	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006865|amino acid transport GO:0008152|metabolic process	GO:0008194|UDP-glycosyltransferase activity GO:0016758|transferase activity, transferring hexosyl groups	NA
pt2_03192	A	A2S	Potri.001G303600	Potri.001G303600(AS) Potri.001G303000(BS)	POPTR_0001s31120	sp|Q2V6J9|UFOG7_FRAAN	UDP-glucose flavonoid 3-O-glucosyltransferase 7 OS=Fragaria ananassa GN=GT7 PE=1 SV=1	AT4G34131.1	| Symbols: UGT73B3 | UDP-glucosyl transferase 73B3 | chr4:16343268-16344713 REVERSE LENGTH=481	LOC_Os01g45110.1	protein|anthocyanin 3-O-beta-glucosyltransferase, putative, expressed	IMGA|Medtr5g016660.1	Anthocyanin 3'-O-beta-glucosyltransferase chr5 5738929-5737260 H EGN_Mt100125 20111014	GO:0008152|metabolic process GO:0051707|response to other organism	GO:0008194|UDP-glycosyltransferase activity GO:0016758|transferase activity, transferring hexosyl groups GO:0035251|UDP-glucosyltransferase activity GO:0080043|quercetin 3-O-glucosyltransferase activity	NA
pt2_03193	A	A1S	Potri.001G303800	Potri.001G303800(AS)	POPTR_0001s31140	sp|Q8W3P8|AOG_PHAAN	Abscisate beta-glucosyltransferase OS=Phaseolus angularis GN=AOG PE=1 SV=1	AT2G15490.3	| Symbols: UGT73B4 | UDP-glycosyltransferase 73B4 | chr2:6761750-6763398 FORWARD LENGTH=481	LOC_Os01g41430.1	protein|UDP-glucoronosyl and UDP-glucosyl transferase, putative, expressed	IMGA|Medtr5g039900.1	Anthocyanin 3'-O-beta-glucosyltransferase chr5 17147867-17146002 H EGN_Mt100125 20111014	GO:0008152|metabolic process GO:0009407|toxin catabolic process GO:0009723|response to ethylene stimulus GO:0010583|response to cyclopentenone GO:0051707|response to other organism	GO:0008194|UDP-glycosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups GO:0035251|UDP-glucosyltransferase activity GO:0080043|quercetin 3-O-glucosyltransferase activity GO:0080044|quercetin 7-O-glucosyltransferase activity	GO:0005829|cytosol
pt2_03194	A	A1S	Potri.001G303900	Potri.001G303900(AS)	POPTR_0001s31150	sp|Q9C5D0|CBSX2_ARATH	CBS domain-containing protein CBSX2, chloroplastic OS=Arabidopsis thaliana GN=CBSX2 PE=1 SV=1	AT4G34120.1	| Symbols: LEJ1, CDCP1 | Cystathionine beta-synthase (CBS) family protein | chr4:16341194-16342893 FORWARD LENGTH=238	LOC_Os08g22149.1	protein|CBS domain containing membrane protein, putative, expressed	IMGA|Medtr5g016770.1	Inosine-5'-monophosphate dehydrogenase chr5 5779792-5774839 F EGN_Mt100125 20111014	GO:0045454|cell redox homeostasis	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_03195	A	A2S	Potri.001G304000	Potri.001G304000(AS) Potri.009G099300(DS)	POPTR_0001s31160	sp|P42731|PABP2_ARATH	Polyadenylate-binding protein 2 OS=Arabidopsis thaliana GN=PAB2 PE=1 SV=1	AT4G34110.1	| Symbols: PAB2, PABP2, ATPAB2 | poly(A) binding protein 2 | chr4:16336732-16339892 FORWARD LENGTH=629	LOC_Os09g02700.1	protein|polyadenylate-binding protein, putative, expressed	IMGA|Medtr1g019150.1	Polyadenylate-binding protein chr1 5864665-5869890 F EGN_Mt100125 20111014	GO:0006164|purine nucleotide biosynthetic process GO:0046686|response to cadmium ion	GO:0003723|RNA binding GO:0003743|translation initiation factor activity GO:0005515|protein binding	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_03196	C	C1S	Potri.001G304000	Potri.001G304000(CS)	sp|P42731|PABP2_ARATH	Polyadenylate-binding protein 2 OS=Arabidopsis thaliana GN=PAB2 PE=1 SV=1	AT4G34110.1	| Symbols: PAB2, PABP2, ATPAB2 | poly(A) binding protein 2 | chr4:16336732-16339892 FORWARD LENGTH=629	LOC_Os09g02700.1	protein|polyadenylate-binding protein, putative, expressed	IMGA|Medtr1g019150.1	Polyadenylate-binding protein chr1 5864665-5869890 F EGN_Mt100125 20111014	GO:0006164|purine nucleotide biosynthetic process GO:0046686|response to cadmium ion	GO:0003723|RNA binding GO:0003743|translation initiation factor activity GO:0005515|protein binding	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_03197	A	A1S	Potri.001G304100	Potri.001G304100(AS)	POPTR_0001s31170	sp|Q6ZQ89|MARH6_MOUSE	E3 ubiquitin-protein ligase MARCH6 OS=Mus musculus GN=March6 PE=2 SV=2	AT4G34100.1	| Symbols: | RING/U-box superfamily protein | chr4:16330590-16334864 FORWARD LENGTH=1108	LOC_Os06g43210.1	protein|zinc finger, C3HC4 type domain containing protein, expressed	NA	NA	GO:0010025|wax biosynthetic process GO:0010143|cutin biosynthetic process GO:0010345|suberin biosynthetic process	GO:0008270|zinc ion binding	NA
pt2_03198	A	A1S	Potri.001G304200	Potri.001G304200(AS)	POPTR_0001s31180	sp|Q9SLN1|FPP7_ARATH	Filament-like plant protein 7 OS=Arabidopsis thaliana GN=FPP7 PE=2 SV=2	AT2G23360.1	| Symbols: | Plant protein of unknown function (DUF869) | chr2:9949420-9952727 FORWARD LENGTH=898	LOC_Os04g55570.1	protein|plant protein of unknown function DUF869 domain containing protein, expressed	IMGA|Medtr5g021810.1	Filament-like plant protein chr5 8238844-8242977 E EGN_Mt100125 20111014	GO:0006612|protein targeting to membrane GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010363|regulation of plant-type hypersensitive response	NA	GO:0005737|cytoplasm GO:0005886|plasma membrane
pt2_03199	R	R	NA	NA	POPTR_0001s31190	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03200	A	A1S	Potri.001G304500	Potri.001G304500(AS)	POPTR_0001s31200	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03201	A	A1S	Potri.001G304700	Potri.001G304700(AS)	POPTR_0001s31210	sp|O22647|RS16_FRIAG	40S ribosomal protein S16 OS=Fritillaria agrestis GN=RPS16 PE=2 SV=1	AT2G09990.1	| Symbols: | Ribosomal protein S5 domain 2-like superfamily protein | chr2:3781442-3781882 FORWARD LENGTH=146	LOC_Os12g03090.1	protein|ribosomal protein, putative, expressed	IMGA|Medtr5g075240.1	40S ribosomal protein S16 chr5 30964538-30965248 F EGN_Mt100125 20111014	GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005737|cytoplasm GO:0005840|ribosome GO:0009506|plasmodesma GO:0009507|chloroplast GO:0022627|cytosolic small ribosomal subunit
pt2_03202	A	A2S	Potri.001G304800	Potri.001G304800(AS) Potri.009G099800(DS)	POPTR_0001s31220	sp|O65922|CAMT2_POPTR	Caffeoyl-CoA O-methyltransferase 2 OS=Populus trichocarpa GN=CCOAOMT2 PE=2 SV=1	AT4G34050.1	| Symbols: CCoAOMT1 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr4:16310844-16311973 FORWARD LENGTH=259	LOC_Os06g06980.1	protein|caffeoyl-CoA O-methyltransferase, putative, expressed	NA	NA	GO:0006598|polyamine catabolic process GO:0009611|response to wounding GO:0009698|phenylpropanoid metabolic process GO:0009805|coumarin biosynthetic process GO:0009963|positive regulation of flavonoid biosynthetic process GO:0019344|cysteine biosynthetic process GO:0042398|cellular modified amino acid biosynthetic process GO:0046686|response to cadmium ion	GO:0008171|O-methyltransferase activity GO:0042409|caffeoyl-CoA O-methyltransferase activity	GO:0005634|nucleus GO:0005829|cytosol
pt2_03203	G	G1	NA	NA	POPTR_0001s31230	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03204	A	A1S	Potri.001G304900	Potri.001G304900(AS)	POPTR_0001s31240	sp|Q9LT17|BBR_ARATH	E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana GN=BBR PE=2 SV=1	AT4G34040.1	| Symbols: | RING/U-box superfamily protein | chr4:16304638-16307503 REVERSE LENGTH=666	LOC_Os04g55510.1	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr1g019200.1	Zinc finger protein chr1 5896776-5903343 E EGN_Mt100125 20111014	NA	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_03205	C	C1S	Potri.001G305100	Potri.001G305100(CS)	sp|Q9FXA3|BH095_ARATH	Transcription factor bHLH95 OS=Arabidopsis thaliana GN=BHLH95 PE=2 SV=2	AT1G49770.1	| Symbols: RGE1, ZOU | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr1:18424578-18426531 FORWARD LENGTH=308	LOC_Os04g35010.1	protein|helix-loop-helix DNA-binding domain containing protein, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0009790|embryo development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_03206	G	G1	NA	NA	POPTR_0001s31260	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03207	A	A1S	Potri.001G305300	Potri.001G305300(AS)	POPTR_0001s31270	sp|B9GHA6|GUFP_POPTR	Translation factor GUF1 homolog, chloroplastic OS=Populus trichocarpa GN=POPTRDRAFT_815670 PE=3 SV=1	AT5G08650.1	| Symbols: | Small GTP-binding protein | chr5:2806533-2813220 REVERSE LENGTH=681	LOC_Os02g06300.1	protein|GTP-binding protein lepA, putative, expressed	NA	NA	GO:0006098|pentose-phosphate shunt GO:0006364|rRNA processing GO:0009637|response to blue light GO:0009902|chloroplast relocation GO:0010027|thylakoid membrane organization GO:0010114|response to red light GO:0010218|response to far red light GO:0015979|photosynthesis GO:0015995|chlorophyll biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0034660|ncRNA metabolic process	GO:0003746|translation elongation factor activity GO:0003924|GTPase activity GO:0005525|GTP binding	GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_03208	A	A1S	Potri.001G305300	Potri.001G305300(AS)	POPTR_0001s31270	sp|B9GHA6|GUFP_POPTR	Translation factor GUF1 homolog, chloroplastic OS=Populus trichocarpa GN=POPTRDRAFT_815670 PE=3 SV=1	AT5G08650.1	| Symbols: | Small GTP-binding protein | chr5:2806533-2813220 REVERSE LENGTH=681	LOC_Os02g06300.1	protein|GTP-binding protein lepA, putative, expressed	NA	NA	GO:0006098|pentose-phosphate shunt GO:0006364|rRNA processing GO:0009637|response to blue light GO:0009902|chloroplast relocation GO:0010027|thylakoid membrane organization GO:0010114|response to red light GO:0010218|response to far red light GO:0015979|photosynthesis GO:0015995|chlorophyll biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0034660|ncRNA metabolic process	GO:0003746|translation elongation factor activity GO:0003924|GTPase activity GO:0005525|GTP binding	GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_03209	A	A1S	Potri.001G305300	Potri.001G305300(AS)	POPTR_0001s31270	sp|B9GHA6|GUFP_POPTR	Translation factor GUF1 homolog, chloroplastic OS=Populus trichocarpa GN=POPTRDRAFT_815670 PE=3 SV=1	AT5G08650.1	| Symbols: | Small GTP-binding protein | chr5:2806533-2813220 REVERSE LENGTH=681	LOC_Os02g06300.1	protein|GTP-binding protein lepA, putative, expressed	NA	NA	GO:0006098|pentose-phosphate shunt GO:0006364|rRNA processing GO:0009637|response to blue light GO:0009902|chloroplast relocation GO:0010027|thylakoid membrane organization GO:0010114|response to red light GO:0010218|response to far red light GO:0015979|photosynthesis GO:0015995|chlorophyll biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0034660|ncRNA metabolic process	GO:0003746|translation elongation factor activity GO:0003924|GTPase activity GO:0005525|GTP binding	GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_03210	A	A1S	Potri.001G305300	Potri.001G305300(AS)	POPTR_0001s31270	sp|B9GHA6|GUFP_POPTR	Translation factor GUF1 homolog, chloroplastic OS=Populus trichocarpa GN=POPTRDRAFT_815670 PE=3 SV=1	AT5G08650.1	| Symbols: | Small GTP-binding protein | chr5:2806533-2813220 REVERSE LENGTH=681	LOC_Os02g06300.1	protein|GTP-binding protein lepA, putative, expressed	NA	NA	GO:0006098|pentose-phosphate shunt GO:0006364|rRNA processing GO:0009637|response to blue light GO:0009902|chloroplast relocation GO:0010027|thylakoid membrane organization GO:0010114|response to red light GO:0010218|response to far red light GO:0015979|photosynthesis GO:0015995|chlorophyll biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0034660|ncRNA metabolic process	GO:0003746|translation elongation factor activity GO:0003924|GTPase activity GO:0005525|GTP binding	GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_03211	A	A1S	Potri.001G305400	Potri.001G305400(AS)	POPTR_0001s31280	sp|Q84KJ6|AMT31_ORYSJ	Ammonium transporter 3 member 1 OS=Oryza sativa subsp. japonica GN=AMT3-1 PE=2 SV=1	AT2G38290.1	| Symbols: ATAMT2, AMT2;1, AMT2 | ammonium transporter 2 | chr2:16039672-16042291 REVERSE LENGTH=475	LOC_Os01g65000.1	protein|ammonium transporter protein, putative, expressed	IMGA|contig_48397_2.1	Ammonium transporter contig_48397 3676-3245 E PREDN 20111014	GO:0000165|MAPK cascade GO:0002237|response to molecule of bacterial origin GO:0002831|regulation of response to biotic stimulus GO:0006612|protein targeting to membrane GO:0006820|anion transport GO:0006862|nucleotide transport GO:0006888|ER to Golgi vesicle-mediated transport GO:0006944|cellular membrane fusion GO:0006995|cellular response to nitrogen starvation GO:0009409|response to cold GO:0009581|detection of external stimulus GO:0009595|detection of biotic stimulus GO:0009605|response to external stimulus GO:0009624|response to nematode GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process GO:0009738|abscisic acid mediated signaling pathway GO:0009744|response to sucrose stimulus GO:0009749|response to glucose stimulus GO:0009750|response to fructose stimulus GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0015695|organic cation transport GO:0015696|ammonium transport GO:0015802|basic amino acid transport GO:0030968|endoplasmic reticulum unfolded protein response GO:0031347|regulation of defense response GO:0031348|negative regulation of defense response GO:0042742|defense response to bacterium GO:0043069|negative regulation of programmed cell death GO:0043090|amino acid import GO:0043269|regulation of ion transport GO:0043900|regulation of multi-organism process GO:0050832|defense response to fungus GO:0051707|response to other organism	GO:0008519|ammonium transmembrane transporter activity GO:0015398|high affinity secondary active ammonium transmembrane transporter activity	GO:0005737|cytoplasm GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_03212	C	C2S	Potri.001G305500	Potri.001G305500(CS) Potri.019G000900(CS)	sp|Q15291|RBBP5_HUMAN	Retinoblastoma-binding protein 5 OS=Homo sapiens GN=RBBP5 PE=1 SV=2	AT3G21060.1	| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr3:7377822-7379942 FORWARD LENGTH=547	LOC_Os03g10990.1	protein|retinoblastoma-binding protein-like, putative, expressed	IMGA|Medtr5g069620.1	Retinoblastoma-binding protein chr5 28530095-28528629 H EGN_Mt100125 20111014	GO:0010228|vegetative to reproductive phase transition of meristem	GO:0000166|nucleotide binding	GO:0005634|nucleus GO:0005834|heterotrimeric G-protein complex GO:0048188|Set1C/COMPASS complex
pt2_03213	A	A1S	Potri.001G305500	Potri.001G305500(AS)	POPTR_0001s31290	sp|Q15291|RBBP5_HUMAN	Retinoblastoma-binding protein 5 OS=Homo sapiens GN=RBBP5 PE=1 SV=2	AT3G21060.1	| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr3:7377822-7379942 FORWARD LENGTH=547	LOC_Os03g10990.1	protein|retinoblastoma-binding protein-like, putative, expressed	IMGA|Medtr5g069620.1	Retinoblastoma-binding protein chr5 28530095-28528629 H EGN_Mt100125 20111014	GO:0010228|vegetative to reproductive phase transition of meristem	GO:0000166|nucleotide binding	GO:0005634|nucleus GO:0005834|heterotrimeric G-protein complex GO:0048188|Set1C/COMPASS complex
pt2_03214	A	A1S	Potri.001G305600	Potri.001G305600(AS)	POPTR_0001s31300	sp|Q9STW5|MACP2_ARATH	MACPF domain-containing protein At4g24290 OS=Arabidopsis thaliana GN=At4g24290 PE=2 SV=1	AT4G24290.2	| Symbols: | MAC/Perforin domain-containing protein | chr4:12594856-12597815 FORWARD LENGTH=606	LOC_Os07g07194.1	protein|MAC/Perforin domain containing protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005576|extracellular region GO:0005886|plasma membrane
pt2_03215	A	A1S	Potri.001G305700	Potri.001G305700(AS)	POPTR_0001s31310	sp|Q5R7Q3|NIPA2_PONAB	Magnesium transporter NIPA2 OS=Pongo abelii GN=NIPA2 PE=2 SV=1	AT2G21120.1	| Symbols: | Protein of unknown function (DUF803) | chr2:9052103-9054266 REVERSE LENGTH=328	LOC_Os05g35570.1	protein|DUF803 domain containing, putative, expressed	IMGA|Medtr5g090020.1	Magnesium transporter NIPA2 chr5 38124854-38117514 F EGN_Mt100125 20111014	GO:0008150|biological_process GO:0009625|response to insect GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0031348|negative regulation of defense response	NA	GO:0005886|plasma membrane
pt2_03216	A	A1S	Potri.001G305700	Potri.001G305700(AS)	POPTR_0001s31310	sp|Q5R7Q3|NIPA2_PONAB	Magnesium transporter NIPA2 OS=Pongo abelii GN=NIPA2 PE=2 SV=1	AT2G21120.1	| Symbols: | Protein of unknown function (DUF803) | chr2:9052103-9054266 REVERSE LENGTH=328	LOC_Os05g35570.1	protein|DUF803 domain containing, putative, expressed	IMGA|Medtr5g090020.1	Magnesium transporter NIPA2 chr5 38124854-38117514 F EGN_Mt100125 20111014	GO:0008150|biological_process GO:0009625|response to insect GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0031348|negative regulation of defense response	NA	GO:0005886|plasma membrane
pt2_03217	A	A1S	Potri.001G305700	Potri.001G305700(AS)	POPTR_0001s31310	sp|Q5R7Q3|NIPA2_PONAB	Magnesium transporter NIPA2 OS=Pongo abelii GN=NIPA2 PE=2 SV=1	AT2G21120.1	| Symbols: | Protein of unknown function (DUF803) | chr2:9052103-9054266 REVERSE LENGTH=328	LOC_Os05g35570.1	protein|DUF803 domain containing, putative, expressed	IMGA|Medtr5g090020.1	Magnesium transporter NIPA2 chr5 38124854-38117514 F EGN_Mt100125 20111014	GO:0008150|biological_process GO:0009625|response to insect GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0031348|negative regulation of defense response	NA	GO:0005886|plasma membrane
pt2_03218	A	A2S	Potri.001G305800	Potri.001G305800(AS) Potri.001G305900(AA)	POPTR_0001s31320	NA	NA	AT1G34320.1	| Symbols: | Protein of unknown function (DUF668) | chr1:12520713-12524046 FORWARD LENGTH=657	LOC_Os01g65330.1	protein|expressed protein	IMGA|Medtr1g025340.1	hypothetical protein chr1 8196196-8201985 E EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation	NA	GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_03219	C	C1S	Potri.001G305900	Potri.001G305900(CS)	sp|Q9FT92|Y5843_ARATH	Uncharacterized protein At5g08430 OS=Arabidopsis thaliana GN=At5g08430 PE=1 SV=2	AT5G63700.1	| Symbols: | zinc ion binding;DNA binding | chr5:25493934-25497632 REVERSE LENGTH=602	LOC_Os01g66140.1	protein|plus-3 domain containing protein, putative, expressed	IMGA|Medtr5g021500.1	Zinc finger CCCH domain-containing protein chr5 8053691-8047394 E EGN_Mt100125 20111014	GO:0006352|DNA-dependent transcription, initiation GO:0010264|myo-inositol hexakisphosphate biosynthetic process GO:0016570|histone modification	GO:0003677|DNA binding GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_03220	G	G6	NA	NA	POPTR_0001s31340	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03221	A	A1S	Potri.001G306000	Potri.001G306000(AS)	POPTR_0001s31350	sp|Q8W4S5|Y5371_ARATH	Probable LRR receptor-like serine/threonine-protein kinase At5g63710 OS=Arabidopsis thaliana GN=At5g63710 PE=2 SV=1	AT5G63710.1	| Symbols: | Leucine-rich repeat protein kinase family protein | chr5:25499475-25502598 FORWARD LENGTH=614	LOC_Os02g18320.1	protein|BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	IMGA|Medtr5g033820.1	Leucine-rich repeat receptor-like kinase chr5 14174963-14169961 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006612|protein targeting to membrane GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010363|regulation of plant-type hypersensitive response	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_03222	A	A1S	Potri.001G306100	Potri.001G306100(AS)	POPTR_0001s31360	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_03223	A	A1S	Potri.001G306200	Potri.001G306200(AS)	POPTR_0001s31370	sp|Q766C3|NEP1_NEPGR	Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1	AT2G03200.1	| Symbols: | Eukaryotic aspartyl protease family protein | chr2:966506-967891 REVERSE LENGTH=461	LOC_Os04g37550.1	protein|aspartic proteinase nepenthesin-2 precursor, putative, expressed	IMGA|contig_77063_1.1	Aspartic proteinase nepenthesin I contig_77063 1601-318 E PREDN 20111014	GO:0000041|transition metal ion transport GO:0006508|proteolysis GO:0010228|vegetative to reproductive phase transition of meristem GO:0010413|glucuronoxylan metabolic process GO:0016926|protein desumoylation GO:0045492|xylan biosynthetic process GO:0050665|hydrogen peroxide biosynthetic process	GO:0004190|aspartic-type endopeptidase activity	GO:0005576|extracellular region
pt2_03224	A	A1S	Potri.001G306300	Potri.001G306300(AS)	POPTR_0001s31380	NA	NA	AT5G53590.1	| Symbols: | SAUR-like auxin-responsive protein family | chr5:21772107-21772535 FORWARD LENGTH=142	LOC_Os02g52990.1	protein|OsSAUR12 - Auxin-responsive SAUR gene family member, expressed	IMGA|Medtr5g008370.1	Auxin-induced protein-like protein chr5 1519989-1518903 H EGN_Mt100125 20111014	GO:0009733|response to auxin stimulus	GO:0003674|molecular_function	NA
pt2_03225	G	G1	NA	NA	POPTR_0001s31390	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03226	A	A1S	Potri.001G306500	Potri.001G306500(AS)	POPTR_0001s31400	sp|Q9BRX9|WDR83_HUMAN	WD repeat domain-containing protein 83 OS=Homo sapiens GN=WDR83 PE=1 SV=1	AT5G64730.1	| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr5:25873146-25875021 FORWARD LENGTH=299	LOC_Os02g33860.1	protein|WD domain, G-beta repeat domain containing protein, expressed	IMGA|Medtr5g090420.1	WD-repeat protein-like protein chr5 38334682-38338889 E EGN_Mt100125 20111014	NA	GO:0000166|nucleotide binding	GO:0005737|cytoplasm GO:0005834|heterotrimeric G-protein complex GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_03227	A	A1S	Potri.001G306600	Potri.001G306600(AS)	POPTR_0001s31410	NA	NA	AT2G21740.1	| Symbols: | Protein of unknown function (DUF1278) | chr2:9281986-9282363 REVERSE LENGTH=125	LOC_Os11g06730.1	protein|ECAGL2 - ECA1 gametogenesis related family protein precursor, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_03228	A	A1S	Potri.001G306700	Potri.001G306700(AS)	POPTR_0001s31420	NA	NA	AT1G76750.1	| Symbols: | Protein of unknown function (DUF1278) | chr1:28811107-28811583 FORWARD LENGTH=158	LOC_Os11g06730.1	protein|ECAGL2 - ECA1 gametogenesis related family protein precursor, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_03229	B	B1S	Potri.001G306800	Potri.001G306800(BS)	POPTR_0001s31430	NA	NA	NA	NA	NA	NA	NA	NA	NA	GO:0003674|molecular_function	NA
pt2_03230	A	A1S	Potri.001G306900	Potri.001G306900(AS)	POPTR_0001s31440	sp|Q39962|CBPR_HEVBR	Citrate-binding protein OS=Hevea brasiliensis GN=CBP PE=1 SV=1	NA	NA	LOC_Os12g07310.1	protein|citrate-binding protein precursor, putative, expressed	NA	NA	NA	NA	NA
pt2_03231	A	A1S	Potri.001G307000	Potri.001G307000(AS)	POPTR_0001s31450	sp|Q39962|CBPR_HEVBR	Citrate-binding protein OS=Hevea brasiliensis GN=CBP PE=1 SV=1	NA	NA	LOC_Os12g07310.1	protein|citrate-binding protein precursor, putative, expressed	NA	NA	NA	NA	NA
pt2_03232	A	A1S	Potri.001G307100	Potri.001G307100(AS)	POPTR_0001s31460	sp|Q39962|CBPR_HEVBR	Citrate-binding protein OS=Hevea brasiliensis GN=CBP PE=1 SV=1	NA	NA	LOC_Os12g07310.1	protein|citrate-binding protein precursor, putative, expressed	NA	NA	NA	NA	NA
pt2_03233	A	A1S	Potri.001G307200	Potri.001G307200(AS)	POPTR_0001s31470	sp|P42734|CADH9_ARATH	Probable cinnamyl alcohol dehydrogenase 9 OS=Arabidopsis thaliana GN=CAD9 PE=2 SV=2	AT4G39330.1	| Symbols: ATCAD9, CAD9 | cinnamyl alcohol dehydrogenase 9 | chr4:18291268-18292772 FORWARD LENGTH=360	LOC_Os10g29470.1	protein|dehydrogenase, putative, expressed	IMGA|Medtr5g031230.1	Cinnamyl alcohol dehydrogenase chr5 12962357-12963922 H EGN_Mt100125 20111014	GO:0009809|lignin biosynthetic process GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0008270|zinc ion binding GO:0016491|oxidoreductase activity GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups GO:0045551|cinnamyl-alcohol dehydrogenase activity	GO:0005737|cytoplasm GO:0048046|apoplast
pt2_03234	A	A1S	Potri.001G307300	Potri.001G307300(AS)	POPTR_0001s31480	sp|Q40392|TMVRN_NICGU	TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1	AT5G17680.1	| Symbols: | disease resistance protein (TIR-NBS-LRR class), putative | chr5:5822999-5827153 FORWARD LENGTH=1294	LOC_Os01g35254.1	protein|transposon protein, putative, CACTA, En/Spm sub-class, expressed	IMGA|Medtr5g040490.1	Disease resistance-like protein chr5 17385532-17389405 H EGN_Mt100125 20111014	GO:0006952|defense response GO:0007165|signal transduction	GO:0043531|ADP binding	GO:0005622|intracellular
pt2_03235	A	A1S	Potri.001G307400	Potri.001G307400(AS)	POPTR_0001s31490	sp|Q4PE39|SEC23_USTMA	Protein transport protein SEC23 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=SEC23 PE=3 SV=1	AT1G05520.1	| Symbols: | Sec23/Sec24 protein transport family protein | chr1:1631126-1635703 REVERSE LENGTH=783	LOC_Os11g24560.1	protein|protein transport protein, putative, expressed	NA	NA	GO:0006810|transport GO:0006886|intracellular protein transport GO:0006888|ER to Golgi vesicle-mediated transport	GO:0005215|transporter activity GO:0008270|zinc ion binding	GO:0005737|cytoplasm GO:0005829|cytosol GO:0030127|COPII vesicle coat
pt2_03236	A	A1S	Potri.001G307500	Potri.001G307500(AS)	POPTR_0001s31500	sp|Q0JCU7|ZEP_ORYSJ	Zeaxanthin epoxidase, chloroplastic OS=Oryza sativa subsp. japonica GN=ZEP PE=2 SV=1	AT4G38540.1	| Symbols: | FAD/NAD(P)-binding oxidoreductase family protein | chr4:18023187-18024827 FORWARD LENGTH=407	LOC_Os03g05920.1	protein|expressed protein	IMGA|Medtr5g013260.1	Zeaxanthin epoxidase chr5 3919814-3917042 E EGN_Mt100125 20111014	GO:0008152|metabolic process GO:0009617|response to bacterium GO:0045087|innate immune response	GO:0004497|monooxygenase activity GO:0016491|oxidoreductase activity	GO:0005575|cellular_component
pt2_03237	A	A1S	Potri.001G307600	Potri.001G307600(AS)	POPTR_0001s31510	sp|F4KFC7|MD26C_ARATH	Probable mediator of RNA polymerase II transcription subunit 26c OS=Arabidopsis thaliana GN=MED26C PE=2 SV=1	AT5G09850.1	| Symbols: | Transcription elongation factor (TFIIS) family protein | chr5:3063488-3065221 REVERSE LENGTH=353	LOC_Os12g06850.1	protein|transcription elongation factor protein, putative, expressed	NA	NA	GO:0006351|transcription, DNA-dependent GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding	GO:0005634|nucleus GO:0005829|cytosol GO:0016021|integral to membrane
pt2_03238	A	A2S	Potri.001G307800	Potri.001G307800(AS) Potri.T073300(AS)	POPTR_0001s31520	sp|Q6J163|5NG4_PINTA	Auxin-induced protein 5NG4 OS=Pinus taeda PE=2 SV=1	AT5G64700.1	| Symbols: | nodulin MtN21 /EamA-like transporter family protein | chr5:25865190-25866845 REVERSE LENGTH=359	LOC_Os05g01570.1	protein|auxin-induced protein 5NG4, putative, expressed	IMGA|Medtr5g021160.1	Auxin-induced protein 5NG4 chr5 7866846-7869645 E EGN_Mt100125 20111014	NA	GO:0003674|molecular_function	GO:0005576|extracellular region GO:0016020|membrane
pt2_03239	A	A2S	Potri.001G307900	Potri.001G307900(AS) Potri.T073200(DS)	POPTR_0001s31530	sp|Q6J163|5NG4_PINTA	Auxin-induced protein 5NG4 OS=Pinus taeda PE=2 SV=1	AT1G25270.1	| Symbols: | nodulin MtN21 /EamA-like transporter family protein | chr1:8857726-8859909 FORWARD LENGTH=355	LOC_Os04g59120.1	protein|auxin-induced protein 5NG4, putative, expressed	IMGA|Medtr1g114210.1	Auxin-induced protein 5NG4 chr1 33072149-33074364 H EGN_Mt100125 20111014	NA	NA	GO:0005576|extracellular region GO:0016020|membrane
pt2_03240	A	A2S	Potri.001G308100	Potri.001G308100(AS) Potri.T073100(AS)	POPTR_0001s31540	sp|P09800|LEGB_GOSHI	Legumin B OS=Gossypium hirsutum GN=LEGB PE=2 SV=1	AT5G44120.3	| Symbols: CRA1, ATCRA1, CRU1 | RmlC-like cupins superfamily protein | chr5:17756460-17758246 REVERSE LENGTH=472	LOC_Os01g55690.1	protein|glutelin, putative, expressed	IMGA|Medtr1g072630.3	Legumin chr1 18241732-18234911 F EGN_Mt100125 20111014	GO:0009737|response to abscisic acid stimulus GO:0010162|seed dormancy process GO:0010431|seed maturation GO:0071215|cellular response to abscisic acid stimulus	GO:0045735|nutrient reservoir activity	GO:0005634|nucleus
pt2_03241	A	A4S	Potri.001G308200	Potri.001G308200(AS) Potri.T073000(DS) Potri.T072900(DS) Potri.001G308300(DS)	POPTR_0001s31550	sp|Q93X23|MYRS_QUEIL	Myrcene synthase, chloroplastic OS=Quercus ilex PE=1 SV=1	AT3G25810.1	| Symbols: | Terpenoid cyclases/Protein prenyltransferases superfamily protein | chr3:9430805-9433844 FORWARD LENGTH=598	LOC_Os08g04500.2	protein|terpene synthase, putative, expressed	IMGA|Medtr5g062230.1	(+)-delta-cadinene synthase isozyme A chr5 25036066-25039371 H EGN_Mt100125 20111014	GO:0008152|metabolic process GO:0016099|monoterpenoid biosynthetic process	GO:0000287|magnesium ion binding GO:0010333|terpene synthase activity GO:0016829|lyase activity GO:0034768|(E)-beta-ocimene synthase activity GO:0050551|myrcene synthase activity	GO:0009507|chloroplast
pt2_03242	A	A2S	Potri.001G308100	Potri.001G308100(AS) Potri.T073100(AS)	POPTR_0001s31560	sp|P09800|LEGB_GOSHI	Legumin B OS=Gossypium hirsutum GN=LEGB PE=2 SV=1	AT5G44120.3	| Symbols: CRA1, ATCRA1, CRU1 | RmlC-like cupins superfamily protein | chr5:17756460-17758246 REVERSE LENGTH=472	LOC_Os01g55690.1	protein|glutelin, putative, expressed	IMGA|Medtr1g072630.3	Legumin chr1 18241732-18234911 F EGN_Mt100125 20111014	GO:0009737|response to abscisic acid stimulus GO:0010162|seed dormancy process GO:0010431|seed maturation GO:0071215|cellular response to abscisic acid stimulus	GO:0045735|nutrient reservoir activity	GO:0005634|nucleus
pt2_03243	A	A4S	Potri.T073000	Potri.T073000(AS) Potri.T072900(BS) Potri.001G308300(BS) Potri.001G308200(BS)	POPTR_0001s31570	sp|Q93X23|MYRS_QUEIL	Myrcene synthase, chloroplastic OS=Quercus ilex PE=1 SV=1	AT3G25810.1	| Symbols: | Terpenoid cyclases/Protein prenyltransferases superfamily protein | chr3:9430805-9433844 FORWARD LENGTH=598	LOC_Os08g04500.2	protein|terpene synthase, putative, expressed	IMGA|Medtr5g062230.1	(+)-delta-cadinene synthase isozyme A chr5 25036066-25039371 H EGN_Mt100125 20111014	GO:0008152|metabolic process GO:0016099|monoterpenoid biosynthetic process	GO:0000287|magnesium ion binding GO:0010333|terpene synthase activity GO:0016829|lyase activity GO:0034768|(E)-beta-ocimene synthase activity GO:0050551|myrcene synthase activity	GO:0009507|chloroplast
pt2_03244	A	A4S	Potri.001G308300	Potri.001G308300(AS) Potri.T073000(BS) Potri.T072900(BS) Potri.001G308200(BS)	POPTR_0001s31580	sp|Q93X23|MYRS_QUEIL	Myrcene synthase, chloroplastic OS=Quercus ilex PE=1 SV=1	AT3G25830.1	| Symbols: ATTPS-CIN, TPS-CIN | terpene synthase-like sequence-1,8-cineole | chr3:9447545-9450316 FORWARD LENGTH=600	LOC_Os08g04500.2	protein|terpene synthase, putative, expressed	IMGA|Medtr5g062230.1	(+)-delta-cadinene synthase isozyme A chr5 25036066-25039371 H EGN_Mt100125 20111014	GO:0008152|metabolic process GO:0016099|monoterpenoid biosynthetic process	GO:0000287|magnesium ion binding GO:0010333|terpene synthase activity GO:0016829|lyase activity GO:0034768|(E)-beta-ocimene synthase activity GO:0050551|myrcene synthase activity	GO:0009507|chloroplast
pt2_03245	C	C1S	Potri.001G308400	Potri.001G308400(CS)	sp|C0LGG9|Y5344_ARATH	Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2	AT1G53440.1	| Symbols: | Leucine-rich repeat transmembrane protein kinase | chr1:19945959-19951562 FORWARD LENGTH=1035	LOC_Os09g17630.1	protein|receptor-like protein kinase 2, putative, expressed	IMGA|Medtr5g083910.1	Cysteine-rich receptor-like protein kinase chr5 35206055-35197539 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_03246	A	A2S	Potri.001G308500	Potri.001G308500(AS) Potri.T072800(DS)	POPTR_0001s31600	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03247	A	A2S	Potri.T072700	Potri.T072700(AS) Potri.001G308600(AS)	POPTR_0001s31610	sp|C0LGG8|Y5343_ARATH	Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1	AT1G07650.1	| Symbols: | Leucine-rich repeat transmembrane protein kinase | chr1:2359817-2366423 REVERSE LENGTH=1014	LOC_Os09g17630.1	protein|receptor-like protein kinase 2, putative, expressed	IMGA|Medtr5g083910.1	Cysteine-rich receptor-like protein kinase chr5 35206055-35197539 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_03248	A	A2S	Potri.001G308700	Potri.001G308700(AS) Potri.T072600(BS)	POPTR_0001s31620	sp|Q9C7N5|GDL14_ARATH	GDSL esterase/lipase At1g29660 OS=Arabidopsis thaliana GN=At1g29660 PE=2 SV=1	AT1G29660.1	| Symbols: | GDSL-like Lipase/Acylhydrolase superfamily protein | chr1:10371955-10373624 FORWARD LENGTH=364	LOC_Os01g54470.1	protein|GDSL-like lipase/acylhydrolase, putative, expressed	IMGA|contig_3364_1.1	GDSL esterase/lipase contig_3364 435-107 H PREDN 20111014	GO:0006629|lipid metabolic process GO:0006833|water transport GO:0009651|response to salt stress GO:0009750|response to fructose stimulus	GO:0004091|carboxylesterase activity GO:0016788|hydrolase activity, acting on ester bonds	GO:0005576|extracellular region GO:0005634|nucleus GO:0048046|apoplast
pt2_03249	B	B1S	Potri.T072600	Potri.T072600(BS)	POPTR_0001s31620	sp|Q9C7N5|GDL14_ARATH	GDSL esterase/lipase At1g29660 OS=Arabidopsis thaliana GN=At1g29660 PE=2 SV=1	AT1G29660.1	| Symbols: | GDSL-like Lipase/Acylhydrolase superfamily protein | chr1:10371955-10373624 FORWARD LENGTH=364	LOC_Os01g54470.1	protein|GDSL-like lipase/acylhydrolase, putative, expressed	IMGA|Medtr1g079540.1	GDSL esterase/lipase chr1 19869495-19867635 E EGN_Mt100125 20111014	GO:0006629|lipid metabolic process GO:0006833|water transport GO:0009651|response to salt stress GO:0009750|response to fructose stimulus	GO:0004091|carboxylesterase activity GO:0016788|hydrolase activity, acting on ester bonds	GO:0005576|extracellular region GO:0005634|nucleus GO:0048046|apoplast
pt2_03250	A	A2S	Potri.T072500	Potri.T072500(AS) Potri.001G308800(AS)	POPTR_0001s31630	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03251	A	A1S	Potri.001G308900	Potri.001G308900(AS)	POPTR_0001s31640	NA	NA	AT2G18465.1	| Symbols: | Chaperone DnaJ-domain superfamily protein | chr2:8003223-8004742 REVERSE LENGTH=268	LOC_Os04g59060.1	protein|heat shock protein DnaJ, putative, expressed	NA	NA	GO:0006457|protein folding	GO:0031072|heat shock protein binding	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_03252	A	A1S	Potri.001G309000	Potri.001G309000(AS)	POPTR_0001s31650	NA	NA	AT3G18800.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; Has 58 Blast hits to 58 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:6479746-6480339 FORWARD LENGTH=197	LOC_Os04g59050.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0005886|plasma membrane
pt2_03253	A	A1S	Potri.001G309100	Potri.001G309100(AS)	POPTR_0001s31660	sp|Q39117|TGT2_ARATH	Trihelix transcription factor GT-2 OS=Arabidopsis thaliana GN=GT-2 PE=2 SV=1	AT1G76880.1	| Symbols: | Duplicated homeodomain-like superfamily protein | chr1:28865594-28867931 FORWARD LENGTH=603	LOC_Os04g45750.1	protein|expressed protein	IMGA|Medtr1g081180.1	Trihelix transcription factor chr1 20670509-20668424 E EGN_Mt100125 20111014	NA	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_03254	A	A1S	Potri.001G309200	Potri.001G309200(AS)	POPTR_0001s31670	sp|O14280|YETB_SCHPO	Uncharacterized bolA-like protein C8C9.11 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC8C9.11 PE=2 SV=2	AT5G09830.1	| Symbols: | BolA-like family protein | chr5:3057816-3058769 REVERSE LENGTH=93	LOC_Os01g64680.1	protein|bolA, putative, expressed	NA	NA	GO:0006301|postreplication repair GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005576|extracellular region
pt2_03255	A	A1S	Potri.001G309300	Potri.001G309300(AS)	POPTR_0001s31680	sp|Q5M755|PAP7_ARATH	Probable plastid-lipid-associated protein 7, chloroplastic OS=Arabidopsis thaliana GN=PAP7 PE=2 SV=1	AT5G09820.2	| Symbols: | Plastid-lipid associated protein PAP / fibrillin family protein | chr5:3056090-3057380 REVERSE LENGTH=273	LOC_Os04g34460.1	protein|PAP fibrillin family domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0005198|structural molecule activity	GO:0009507|chloroplast
pt2_03256	A	A1S	Potri.001G309400	Potri.001G309400(AS)	POPTR_0001s31690	sp|P98188|C94A2_VICSA	Cytochrome P450 94A2 OS=Vicia sativa GN=CYP94A2 PE=2 SV=1	AT2G23180.1	| Symbols: CYP96A1 | cytochrome P450, family 96, subfamily A, polypeptide 1 | chr2:9874953-9876503 FORWARD LENGTH=516	LOC_Os03g04650.1	protein|cytochrome P450 protein, putative, expressed	IMGA|contig_93731_1.1	Cytochrome P450 contig_93731 5-1288 H PREDN 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005576|extracellular region
pt2_03257	A	A3S	Potri.001G309500	Potri.001G309500(AS) Potri.019G010400(DS) Potri.019G006700(DS)	POPTR_0001s31700	sp|P53492|ACT7_ARATH	Actin-7 OS=Arabidopsis thaliana GN=ACT7 PE=1 SV=1	AT5G09810.1	| Symbols: ACT7 | actin 7 | chr5:3052809-3054220 FORWARD LENGTH=377	LOC_Os11g06390.4	protein|actin, putative, expressed	IMGA|Medtr5g066400.1	Actin-related protein chr5 27024745-27037702 F EGN_Mt100125 20111014	GO:0006007|glucose catabolic process GO:0006094|gluconeogenesis GO:0007010|cytoskeleton organization GO:0009416|response to light stimulus GO:0009611|response to wounding GO:0009733|response to auxin stimulus GO:0009845|seed germination GO:0010053|root epidermal cell differentiation GO:0010498|proteasomal protein catabolic process GO:0032880|regulation of protein localization GO:0048364|root development GO:0048767|root hair elongation	GO:0005200|structural constituent of cytoskeleton GO:0005515|protein binding GO:0005524|ATP binding	GO:0005618|cell wall GO:0005730|nucleolus GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0005829|cytosol GO:0005856|cytoskeleton GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope
pt2_03258	A	A1S	Potri.001G309600	Potri.001G309600(AS)	POPTR_0001s31710	sp|Q6NQG7|ATL78_ARATH	RING-H2 finger protein ATL78 OS=Arabidopsis thaliana GN=ATL78 PE=2 SV=1	AT1G49230.1	| Symbols: | RING/U-box superfamily protein | chr1:18209320-18209979 FORWARD LENGTH=219	LOC_Os04g34230.1	protein|RING-H2 finger protein, putative, expressed	IMGA|Medtr5g024730.1	Ring finger protein chr5 9683574-9684454 F EGN_Mt100125 20111014	NA	GO:0008270|zinc ion binding	NA
pt2_03259	B	B1S	Potri.001G309700	Potri.001G309700(BS)	POPTR_0001s31720	sp|Q6NQG7|ATL78_ARATH	RING-H2 finger protein ATL78 OS=Arabidopsis thaliana GN=ATL78 PE=2 SV=1	AT1G49230.1	| Symbols: | RING/U-box superfamily protein | chr1:18209320-18209979 FORWARD LENGTH=219	LOC_Os04g34230.1	protein|RING-H2 finger protein, putative, expressed	IMGA|Medtr5g024730.1	Ring finger protein chr5 9683574-9684454 F EGN_Mt100125 20111014	NA	GO:0008270|zinc ion binding	NA
pt2_03260	A	A1S	Potri.001G309800	Potri.001G309800(AS)	POPTR_0001s31730	sp|Q6BQ20|ATG13_DEBHA	Autophagy-related protein 13 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=ATG13 PE=3 SV=2	AT3G18770.1	| Symbols: | Autophagy-related protein 13 | chr3:6460026-6462510 REVERSE LENGTH=625	LOC_Os11g06320.1	protein|expressed protein	IMGA|Medtr5g068710.1	Autophagy-related protein chr5 28110847-28114511 E EGN_Mt100125 20111014	NA	NA	GO:0005634|nucleus
pt2_03261	A	A1S	Potri.001G309900	Potri.001G309900(AS)	POPTR_0001s31740	sp|P13087|MIRA_RICDU	Miraculin OS=Richadella dulcifica PE=1 SV=3	AT1G17860.1	| Symbols: | Kunitz family trypsin and protease inhibitor protein | chr1:6149343-6149933 FORWARD LENGTH=196	LOC_Os04g44470.1	protein|KUN1 - Kunitz-type trypsin inhibitor precursor, expressed	NA	NA	GO:0006457|protein folding GO:0009408|response to heat GO:0009644|response to high light intensity GO:0010167|response to nitrate GO:0015706|nitrate transport GO:0034976|response to endoplasmic reticulum stress GO:0042542|response to hydrogen peroxide	GO:0004866|endopeptidase inhibitor activity	GO:0005576|extracellular region GO:0005618|cell wall GO:0048046|apoplast
pt2_03262	A	A1S	Potri.001G310000	Potri.001G310000(AS)	POPTR_0001s31750	sp|Q94FT4|SALAT_PAPSO	Salutaridinol 7-O-acetyltransferase OS=Papaver somniferum GN=SALAT PE=1 SV=1	AT3G26040.1	| Symbols: | HXXXD-type acyl-transferase family protein | chr3:9519741-9521069 FORWARD LENGTH=442	LOC_Os08g10420.1	protein|transferase family domain containing protein, expressed	IMGA|Medtr5g084870.1	Vinorine synthase chr5 35616526-35615204 H EGN_Mt100125 20111014	NA	GO:0016740|transferase activity GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_03263	A	A1S	Potri.001G310100	Potri.001G310100(AS)	POPTR_0001s31760	NA	NA	AT2G14095.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; Has 106 Blast hits to 103 proteins in 21 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 4; Plants - 87; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). | chr2:5932506-5933752 REVERSE LENGTH=234	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_03264	B	B1S	Potri.001G310200	Potri.001G310200(BS)	POPTR_0001s31770	sp|P0CE10|Y4102_ARATH	Putative uncharacterized protein At4g01020, chloroplastic OS=Arabidopsis thaliana GN=At4g01020 PE=4 SV=1	AT4G01020.1	| Symbols: | helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related | chr4:439086-445043 FORWARD LENGTH=1787	LOC_Os07g42900.1	protein|helicase domain-containing protein, putative, expressed	NA	NA	NA	GO:0003676|nucleic acid binding GO:0003723|RNA binding GO:0004386|helicase activity GO:0005524|ATP binding GO:0008026|ATP-dependent helicase activity GO:0008270|zinc ion binding	GO:0005622|intracellular
pt2_03265	A	A1S	Potri.001G310300	Potri.001G310300(AS)	POPTR_0001s31780	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03266	A	A1S	Potri.001G310400	Potri.001G310400(AS)	POPTR_0001s31790	NA	NA	NA	NA	NA	NA	NA	NA	GO:0010200|response to chitin	NA	GO:0005886|plasma membrane GO:0031225|anchored to membrane
pt2_03267	A	A1S	Potri.001G310500	Potri.001G310500(AS)	POPTR_0001s31800	sp|P47924|RIBBA_ARATH	Riboflavin biosynthesis protein ribBA, chloroplastic OS=Arabidopsis thaliana GN=RIBBA PE=2 SV=2	AT5G64300.1	| Symbols: ATGCH, GCH, ATRIBA1, RFD1 | GTP cyclohydrolase II | chr5:25718459-25720790 FORWARD LENGTH=543	LOC_Os08g37605.2	protein|riboflavin biosynthesis protein ribAB, chloroplast precursor, putative, expressed	NA	NA	GO:0009231|riboflavin biosynthetic process GO:0048767|root hair elongation	GO:0003935|GTP cyclohydrolase II activity GO:0008686|3,4-dihydroxy-2-butanone-4-phosphate synthase activity	GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0016020|membrane
pt2_03268	A	A1S	Potri.001G310600	Potri.001G310600(AS)	POPTR_0001s31810	sp|Q41364|SOT1_SPIOL	2-oxoglutarate/malate translocator, chloroplastic OS=Spinacia oleracea GN=SODIT1 PE=1 SV=1	AT5G64290.1	| Symbols: DCT, DIT2.1 | dicarboxylate transport 2.1 | chr5:25714495-25716642 REVERSE LENGTH=563	LOC_Os09g29430.1	protein|citrate transporter, putative, expressed	NA	NA	GO:0009624|response to nematode GO:0015729|oxaloacetate transport GO:0015743|malate transport GO:0015813|L-glutamate transport GO:0019676|ammonia assimilation cycle GO:0071423|malate transmembrane transport	GO:0005313|L-glutamate transmembrane transporter activity GO:0015131|oxaloacetate transmembrane transporter activity GO:0015140|malate transmembrane transporter activity GO:0015367|oxoglutarate:malate antiporter activity	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009536|plastid GO:0009941|chloroplast envelope GO:0016020|membrane
pt2_03269	A	A1S	Potri.001G310700	Potri.001G310700(AS)	POPTR_0001s31820	sp|Q8LPB4|PSKR1_DAUCA	Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1	AT2G02220.1	| Symbols: ATPSKR1, PSKR1 | phytosulfokin receptor 1 | chr2:584098-587124 REVERSE LENGTH=1008	LOC_Os04g57630.1	protein|phytosulfokine receptor precursor, putative, expressed	IMGA|Medtr1g039220.1	Receptor protein kinase-like protein chr1 10530698-10534277 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway GO:0009611|response to wounding GO:0031347|regulation of defense response GO:0045087|innate immune response	GO:0001653|peptide receptor activity GO:0004383|guanylate cyclase activity GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_03270	A	A1S	Potri.001G310800	Potri.001G310800(AS)	POPTR_0001s31830	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03271	A	A1S	Potri.001G310900	Potri.001G310900(AS)	POPTR_0001s31840	sp|O75533|SF3B1_HUMAN	Splicing factor 3B subunit 1 OS=Homo sapiens GN=SF3B1 PE=1 SV=3	AT5G64270.1	| Symbols: | splicing factor, putative | chr5:25706909-25710718 FORWARD LENGTH=1269	LOC_Os02g05310.3	protein|splicing factor 3B subunit 1, putative, expressed	NA	NA	GO:0006397|mRNA processing	NA	GO:0005634|nucleus GO:0009507|chloroplast
pt2_03272	A	A1S	Potri.001G311000	Potri.001G311000(AS)	POPTR_0001s31850	sp|Q9M3V8|RS6_ASPOF	40S ribosomal protein S6 OS=Asparagus officinalis GN=rps6 PE=2 SV=1	AT5G10360.1	| Symbols: EMB3010, RPS6B | Ribosomal protein S6e | chr5:3258734-3260142 REVERSE LENGTH=249	LOC_Os03g27260.1	protein|40S ribosomal protein S6, putative, expressed	NA	NA	GO:0006364|rRNA processing GO:0006412|translation GO:0009793|embryo development ending in seed dormancy GO:0040007|growth	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005634|nucleus GO:0005829|cytosol GO:0005840|ribosome GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0022626|cytosolic ribosome GO:0022627|cytosolic small ribosomal subunit
pt2_03273	A	A1S	Potri.001G311100	Potri.001G311100(AS)	POPTR_0001s31860	NA	NA	NA	NA	NA	NA	NA	NA	GO:0000398|mRNA splicing, via spliceosome	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	NA
pt2_03274	A	A1S	Potri.001G311200	Potri.001G311200(AS)	POPTR_0001s31870	sp|Q1DXH0|PABP_COCIM	Polyadenylate-binding protein, cytoplasmic and nuclear OS=Coccidioides immitis (strain RS) GN=PAB1 PE=3 SV=1	AT2G44710.1	| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr2:18432902-18436629 FORWARD LENGTH=809	LOC_Os04g45930.1	protein|RNA recognition motif containing protein, expressed	IMGA|Medtr1g019150.1	Polyadenylate-binding protein chr1 5864665-5869890 F EGN_Mt100125 20111014	GO:0000398|mRNA splicing, via spliceosome	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	NA
pt2_03275	A	A3S	Potri.001G311300	Potri.001G311300(AS) Potri.001G311500(BS) Potri.001G312300(BS)	POPTR_0001s31880	sp|Q8RXN0|AB11G_ARATH	ABC transporter G family member 11 OS=Arabidopsis thaliana GN=ABCG11 PE=1 SV=1	AT1G17840.1	| Symbols: WBC11, ABCG11, DSO, COF1, ATWBC11 | white-brown complex homolog protein 11 | chr1:6142870-6145894 FORWARD LENGTH=703	LOC_Os09g29660.1	protein|white-brown complex homolog protein 11, putative, expressed	IMGA|contig_73877_2.1	ABC transporter G family member contig_73877 1922-4464 H PREDN 20111014	GO:0009611|response to wounding GO:0009651|response to salt stress GO:0009737|response to abscisic acid stimulus GO:0015908|fatty acid transport GO:0080051|cutin transport	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0015245|fatty acid transporter activity GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0005886|plasma membrane GO:0009897|external side of plasma membrane GO:0016020|membrane
pt2_03276	A	A3S	Potri.001G311500	Potri.001G311500(AS) Potri.001G312300(AS) Potri.001G311300(BS)	POPTR_0001s31890	sp|Q8RXN0|AB11G_ARATH	ABC transporter G family member 11 OS=Arabidopsis thaliana GN=ABCG11 PE=1 SV=1	AT1G17840.1	| Symbols: WBC11, ABCG11, DSO, COF1, ATWBC11 | white-brown complex homolog protein 11 | chr1:6142870-6145894 FORWARD LENGTH=703	LOC_Os09g29660.1	protein|white-brown complex homolog protein 11, putative, expressed	IMGA|contig_73877_2.1	ABC transporter G family member contig_73877 1922-4464 H PREDN 20111014	GO:0009611|response to wounding GO:0009651|response to salt stress GO:0009737|response to abscisic acid stimulus GO:0015908|fatty acid transport GO:0080051|cutin transport	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0015245|fatty acid transporter activity GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0005886|plasma membrane GO:0009897|external side of plasma membrane GO:0016020|membrane
pt2_03277	A	A2S	Potri.001G311600	Potri.001G311600(AS) Potri.017G051600(DS)	POPTR_0001s31900	sp|O14327|PAB2_SCHPO	Polyadenylate-binding protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pab2 PE=2 SV=1	AT5G65260.1	| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr5:26080501-26082984 REVERSE LENGTH=220	LOC_Os02g52140.2	protein|RNA recognition motif containing protein, putative, expressed	IMGA|Medtr1g073000.1	Polyadenylate-binding protein chr1 18456519-18461191 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03278	A	A1S	Potri.001G311700	Potri.001G311700(AS)	POPTR_0001s31910	NA	NA	AT5G64260.1	| Symbols: EXL2 | EXORDIUM like 2 | chr5:25703980-25704897 FORWARD LENGTH=305	LOC_Os02g52040.1	protein|phosphate-induced protein 1 conserved region domain containing protein, expressed	IMGA|contig_62049_1.1	Unknown protein contig_62049 1573-626 E PREDN 20111014	GO:0008150|biological_process GO:0046685|response to arsenic-containing substance	GO:0003674|molecular_function	GO:0005618|cell wall GO:0005794|Golgi apparatus GO:0005829|cytosol GO:0009505|plant-type cell wall GO:0009506|plasmodesma GO:0009507|chloroplast
pt2_03279	A	A2S	Potri.001G312400	Potri.001G312400(AS) Potri.001G311800(AS)	POPTR_0001s31920	sp|Q9LFQ3|SNL2_ARATH	Paired amphipathic helix protein Sin3-like 2 OS=Arabidopsis thaliana GN=SNL2 PE=1 SV=2	AT5G15020.1	| Symbols: SNL2 | SIN3-like 2 | chr5:4859408-4865569 REVERSE LENGTH=1367	LOC_Os05g01020.2	protein|transcriptional repressor, putative, expressed	NA	NA	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0006355|regulation of transcription, DNA-dependent GO:0007346|regulation of mitotic cell cycle GO:0010048|vernalization response GO:0010228|vegetative to reproductive phase transition of meristem GO:0010413|glucuronoxylan metabolic process GO:0016926|protein desumoylation GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0045492|xylan biosynthetic process GO:0045892|negative regulation of transcription, DNA-dependent GO:0048440|carpel development GO:0050665|hydrogen peroxide biosynthetic process	GO:0003674|molecular_function GO:0005515|protein binding	GO:0005634|nucleus
pt2_03280	B	B2S	Potri.001G312400	Potri.001G312400(BS) Potri.001G311800(BS)	POPTR_0001s31930	sp|Q9LFQ3|SNL2_ARATH	Paired amphipathic helix protein Sin3-like 2 OS=Arabidopsis thaliana GN=SNL2 PE=1 SV=2	AT5G15020.1	| Symbols: SNL2 | SIN3-like 2 | chr5:4859408-4865569 REVERSE LENGTH=1367	LOC_Os05g01020.2	protein|transcriptional repressor, putative, expressed	NA	NA	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0006355|regulation of transcription, DNA-dependent GO:0007346|regulation of mitotic cell cycle GO:0010048|vernalization response GO:0010228|vegetative to reproductive phase transition of meristem GO:0010413|glucuronoxylan metabolic process GO:0016926|protein desumoylation GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0045492|xylan biosynthetic process GO:0045892|negative regulation of transcription, DNA-dependent GO:0048440|carpel development GO:0050665|hydrogen peroxide biosynthetic process	GO:0003674|molecular_function GO:0005515|protein binding	GO:0005634|nucleus
pt2_03281	A	A1S	Potri.001G312500	Potri.001G312500(AS)	POPTR_0001s31940	sp|Q9ZWJ3|U85A2_ARATH	UDP-glycosyltransferase 85A2 OS=Arabidopsis thaliana GN=UGT85A2 PE=2 SV=1	AT1G22360.1	| Symbols: AtUGT85A2, UGT85A2 | UDP-glucosyl transferase 85A2 | chr1:7895068-7897527 REVERSE LENGTH=481	LOC_Os02g51930.1	protein|cytokinin-O-glucosyltransferase 2, putative, expressed	IMGA|Medtr5g064240.1	Cytokinin-O-glucosyltransferase chr5 25966031-25961072 F EGN_Mt100125 20111014	GO:0008152|metabolic process	GO:0008194|UDP-glycosyltransferase activity GO:0015020|glucuronosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03282	A	A1S	Potri.001G312600	Potri.001G312600(AS)	POPTR_0001s31950	sp|Q9ZWJ3|U85A2_ARATH	UDP-glycosyltransferase 85A2 OS=Arabidopsis thaliana GN=UGT85A2 PE=2 SV=1	AT1G22360.1	| Symbols: AtUGT85A2, UGT85A2 | UDP-glucosyl transferase 85A2 | chr1:7895068-7897527 REVERSE LENGTH=481	LOC_Os04g37820.1	protein|cytokinin-O-glucosyltransferase 2, putative, expressed	IMGA|Medtr5g064240.1	Cytokinin-O-glucosyltransferase chr5 25966031-25961072 F EGN_Mt100125 20111014	GO:0008152|metabolic process	GO:0008194|UDP-glycosyltransferase activity GO:0015020|glucuronosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03283	A	A1S	Potri.001G312000	Potri.001G312000(AS)	POPTR_0001s31960	sp|Q9SK82|U85A1_ARATH	UDP-glycosyltransferase 85A1 OS=Arabidopsis thaliana GN=UGT85A1 PE=1 SV=1	AT1G22400.1	| Symbols: UGT85A1, ATUGT85A1 | UDP-Glycosyltransferase superfamily protein | chr1:7903851-7906607 REVERSE LENGTH=489	LOC_Os04g25980.1	protein|cytokinin-O-glucosyltransferase 2, putative, expressed	IMGA|Medtr5g064240.1	Cytokinin-O-glucosyltransferase chr5 25966031-25961072 F EGN_Mt100125 20111014	GO:0006612|protein targeting to membrane GO:0008152|metabolic process GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010363|regulation of plant-type hypersensitive response GO:0030968|endoplasmic reticulum unfolded protein response	GO:0008194|UDP-glycosyltransferase activity GO:0015020|glucuronosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups GO:0050403|trans-zeatin O-beta-D-glucosyltransferase activity GO:0050502|cis-zeatin O-beta-D-glucosyltransferase activity	NA
pt2_03284	A	A1S	Potri.001G312700	Potri.001G312700(AS)	POPTR_0001s31970	sp|Q56Y11|DDPS2_ARATH	Dehydrodolichyl diphosphate synthase 2 OS=Arabidopsis thaliana GN=At5g58770 PE=2 SV=2	AT5G58770.1	| Symbols: | Undecaprenyl pyrophosphate synthetase family protein | chr5:23734396-23735495 FORWARD LENGTH=310	LOC_Os01g63830.1	protein|dehydrodolichyl diphosphate synthase, putative, expressed	IMGA|Medtr5g070210.1	Dehydrodolichyl diphosphate synthase chr5 28739423-28737316 E EGN_Mt100125 20111014	GO:0006744|ubiquinone biosynthetic process GO:0019408|dolichol biosynthetic process	GO:0016765|transferase activity, transferring alkyl or aryl (other than methyl) groups GO:0045547|dehydrodolichyl diphosphate synthase activity	GO:0009507|chloroplast
pt2_03285	A	A1S	Potri.001G312800	Potri.001G312800(AS)	POPTR_0001s31980	sp|Q9C7Z9|SCP18_ARATH	Serine carboxypeptidase-like 18 OS=Arabidopsis thaliana GN=SCPL18 PE=2 SV=2	AT1G33540.1	| Symbols: scpl18 | serine carboxypeptidase-like 18 | chr1:12162349-12164700 REVERSE LENGTH=446	LOC_Os04g09720.2	protein|OsSCP22 - Putative Serine Carboxypeptidase homologue, expressed	IMGA|contig_77658_1.1	Serine carboxypeptidase family protein expressed contig_77658 26-2338 H PREDN 20111014	GO:0006508|proteolysis GO:0019748|secondary metabolic process	GO:0004185|serine-type carboxypeptidase activity GO:0016752|sinapoyltransferase activity	GO:0005576|extracellular region GO:0009505|plant-type cell wall
pt2_03286	A	A1S	Potri.001G312800	Potri.001G312800(AS)	POPTR_0001s31980	sp|Q9C7Z9|SCP18_ARATH	Serine carboxypeptidase-like 18 OS=Arabidopsis thaliana GN=SCPL18 PE=2 SV=2	AT1G33540.1	| Symbols: scpl18 | serine carboxypeptidase-like 18 | chr1:12162349-12164700 REVERSE LENGTH=446	LOC_Os04g09720.2	protein|OsSCP22 - Putative Serine Carboxypeptidase homologue, expressed	IMGA|contig_77658_1.1	Serine carboxypeptidase family protein expressed contig_77658 26-2338 H PREDN 20111014	GO:0006508|proteolysis GO:0019748|secondary metabolic process	GO:0004185|serine-type carboxypeptidase activity GO:0016752|sinapoyltransferase activity	GO:0005576|extracellular region GO:0009505|plant-type cell wall
pt2_03287	A	A1S	Potri.001G312900	Potri.001G312900(AS)	POPTR_0001s31990	sp|Q9LME6|MBD8_ARATH	Methyl-CpG-binding domain-containing protein 8 OS=Arabidopsis thaliana GN=MBD8 PE=2 SV=1	AT1G22310.1	| Symbols: MBD8, ATMBD8 | methyl-CPG-binding domain 8 | chr1:7881714-7883418 REVERSE LENGTH=425	LOC_Os08g37920.2	protein|ZOS8-09 - C2H2 zinc finger protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003677|DNA binding GO:0008327|methyl-CpG binding	GO:0005634|nucleus
pt2_03288	A	A1S	Potri.001G313000	Potri.001G313000(AS)	POPTR_0001s32000	sp|Q9ZWJ3|U85A2_ARATH	UDP-glycosyltransferase 85A2 OS=Arabidopsis thaliana GN=UGT85A2 PE=2 SV=1	AT1G22360.1	| Symbols: AtUGT85A2, UGT85A2 | UDP-glucosyl transferase 85A2 | chr1:7895068-7897527 REVERSE LENGTH=481	LOC_Os02g51930.1	protein|cytokinin-O-glucosyltransferase 2, putative, expressed	IMGA|Medtr5g064240.1	Cytokinin-O-glucosyltransferase chr5 25966031-25961072 F EGN_Mt100125 20111014	GO:0008152|metabolic process	GO:0008194|UDP-glycosyltransferase activity GO:0015020|glucuronosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03289	A	A1S	Potri.001G313100	Potri.001G313100(AS)	POPTR_0001s32010	sp|P0A573|Y2734_MYCBO	Uncharacterized protein Mb2734 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb2734 PE=3 SV=1	AT5G09430.1	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr5:2932162-2933362 FORWARD LENGTH=311	LOC_Os03g27110.1	protein|hydrolase protein, putative, expressed	IMGA|Medtr5g064040.1	Leucine-rich repeat-containing protein chr5 25855744-25864821 E EGN_Mt100125 20111014	NA	GO:0016787|hydrolase activity	GO:0005737|cytoplasm
pt2_03290	A	A1S	Potri.001G313200	Potri.001G313200(AS)	POPTR_0001s32020	sp|Q3EC97|FBL14_ARATH	F-box/LRR-repeat protein 14 OS=Arabidopsis thaliana GN=FBL14 PE=2 SV=1	AT1G80570.1	| Symbols: | RNI-like superfamily protein | chr1:30290828-30292231 FORWARD LENGTH=467	LOC_Os02g55550.1	protein|F-box/LRR-repeat protein 14, putative, expressed	NA	NA	GO:0006511|ubiquitin-dependent protein catabolic process	GO:0004842|ubiquitin-protein ligase activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03291	A	A1S	Potri.001G313300	Potri.001G313300(AS)	POPTR_0001s32030	sp|Q8RXS5|DRL40_ARATH	Probable disease resistance protein At5g63020 OS=Arabidopsis thaliana GN=At5g63020 PE=2 SV=2	AT5G63020.1	| Symbols: | Disease resistance protein (CC-NBS-LRR class) family | chr5:25283252-25286002 REVERSE LENGTH=888	LOC_Os01g57870.1	protein|disease resistance protein RPS2, putative, expressed	IMGA|Medtr5g085400.1	Cc-nbs-lrr resistance protein chr5 35906400-35914135 H EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0006952|defense response	GO:0043531|ADP binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03292	C	C1S	Potri.001G313400	Potri.001G313400(CS)	NA	NA	AT5G52390.1	| Symbols: | PAR1 protein | chr5:21264281-21265173 REVERSE LENGTH=195	NA	NA	IMGA|contig_73583_1.1	PAR-1c protein contig_73583 890-564 H PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_03293	A	A1S	Potri.001G313500	Potri.001G313500(AS)	POPTR_0001s32050	sp|Q9M8M5|ERF84_ARATH	Ethylene-responsive transcription factor ERF084 OS=Arabidopsis thaliana GN=ERF084 PE=2 SV=1	AT1G80580.1	| Symbols: | Integrase-type DNA-binding superfamily protein | chr1:30293558-30294328 FORWARD LENGTH=256	NA	NA	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0009873|ethylene mediated signaling pathway	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_03294	G	G1	NA	NA	POPTR_0001s32060	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03295	A	A1S	Potri.001G313700	Potri.001G313700(AS)	POPTR_0001s32070	NA	NA	AT3G55570.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41761.1); Has 128 Blast hits to 128 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:20610166-20610671 REVERSE LENGTH=109	LOC_Os01g12190.1	protein|expressed protein	IMGA|Medtr5g080750.1	hypothetical protein chr5 33562181-33561990 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03296	B	B1S	Potri.001G313800	Potri.001G313800(BS)	POPTR_0001s32080	NA	NA	AT3G55570.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41761.1); Has 128 Blast hits to 128 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:20610166-20610671 REVERSE LENGTH=109	LOC_Os02g15860.1	protein|expressed protein	IMGA|Medtr5g080750.1	hypothetical protein chr5 33562181-33561990 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03297	R	R	NA	NA	POPTR_0001s32090	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03298	A	A1S	Potri.001G313900	Potri.001G313900(AS)	POPTR_0001s32100	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_03299	A	A1S	Potri.001G314000	Potri.001G314000(AS)	POPTR_0001s32120	sp|Q283L0|KRP5_ORYSJ	Cyclin-dependent kinase inhibitor 5 OS=Oryza sativa subsp. japonica GN=KRP5 PE=2 SV=1	AT2G32710.2	| Symbols: KRP4, ACK2, ICK7 | Cyclin-dependent kinase inhibitor family protein | chr2:13873496-13875350 FORWARD LENGTH=286	LOC_Os03g04490.1	protein|cyclin-dependent kinase inhibitor, putative, expressed	NA	NA	GO:0000280|nuclear division GO:0006275|regulation of DNA replication GO:0006342|chromatin silencing GO:0007050|cell cycle arrest GO:0010389|regulation of G2/M transition of mitotic cell cycle GO:0010440|stomatal lineage progression GO:0016569|covalent chromatin modification GO:0031047|gene silencing by RNA GO:0042023|DNA endoreduplication GO:0045736|negative regulation of cyclin-dependent protein kinase activity GO:0051225|spindle assembly	GO:0004861|cyclin-dependent protein kinase inhibitor activity GO:0005515|protein binding GO:0030332|cyclin binding	GO:0005634|nucleus
pt2_03300	A	A1S	Potri.001G314000	Potri.001G314000(AS)	POPTR_0001s32120	sp|Q283L0|KRP5_ORYSJ	Cyclin-dependent kinase inhibitor 5 OS=Oryza sativa subsp. japonica GN=KRP5 PE=2 SV=1	AT2G32710.2	| Symbols: KRP4, ACK2, ICK7 | Cyclin-dependent kinase inhibitor family protein | chr2:13873496-13875350 FORWARD LENGTH=286	LOC_Os03g04490.1	protein|cyclin-dependent kinase inhibitor, putative, expressed	NA	NA	GO:0000280|nuclear division GO:0006275|regulation of DNA replication GO:0006342|chromatin silencing GO:0007050|cell cycle arrest GO:0010389|regulation of G2/M transition of mitotic cell cycle GO:0010440|stomatal lineage progression GO:0016569|covalent chromatin modification GO:0031047|gene silencing by RNA GO:0042023|DNA endoreduplication GO:0045736|negative regulation of cyclin-dependent protein kinase activity GO:0051225|spindle assembly	GO:0004861|cyclin-dependent protein kinase inhibitor activity GO:0005515|protein binding GO:0030332|cyclin binding	GO:0005634|nucleus
pt2_03301	A	A1S	Potri.001G314100	Potri.001G314100(AS)	POPTR_0001s32130	NA	NA	AT5G55125.2	| Symbols: | Ribosomal protein L31 | chr5:22372737-22372967 FORWARD LENGTH=76	LOC_Os11g31650.1	protein|expressed protein	NA	NA	GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005840|ribosome
pt2_03302	A	A2S	Potri.001G314200	Potri.001G314200(AS) Potri.017G054300(DS)	POPTR_0001s32140	sp|P49098|CYB5_TOBAC	Cytochrome b5 OS=Nicotiana tabacum PE=2 SV=1	AT2G32720.1	| Symbols: B5 #4, ATCB5-B, CB5-B | cytochrome B5 isoform B | chr2:13877013-13878447 REVERSE LENGTH=134	LOC_Os05g01820.1	protein|cytochrome b5-like Heme/Steroid binding domain containing protein, expressed	IMGA|Medtr5g045630.1	Cytochrome b5 chr5 19607244-19603273 E EGN_Mt100125 20111014	GO:0016126|sterol biosynthetic process GO:0019745|pentacyclic triterpenoid biosynthetic process GO:0043447|alkane biosynthetic process	GO:0005515|protein binding GO:0020037|heme binding	GO:0005575|cellular_component GO:0005783|endoplasmic reticulum
pt2_03303	A	A1S	Potri.001G314300	Potri.001G314300(AS)	POPTR_0001s32150	sp|Q99460|PSMD1_HUMAN	26S proteasome non-ATPase regulatory subunit 1 OS=Homo sapiens GN=PSMD1 PE=1 SV=2	AT2G32730.1	| Symbols: | 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit | chr2:13880189-13885464 FORWARD LENGTH=1004	LOC_Os08g12820.1	protein|proteasome/cyclosome repeat containing protein, expressed	NA	NA	GO:0006094|gluconeogenesis GO:0006511|ubiquitin-dependent protein catabolic process GO:0007010|cytoskeleton organization GO:0009630|gravitropism GO:0010498|proteasomal protein catabolic process GO:0042176|regulation of protein catabolic process GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0043248|proteasome assembly GO:0051788|response to misfolded protein	GO:0030234|enzyme regulator activity	GO:0000502|proteasome complex GO:0005829|cytosol GO:0008540|proteasome regulatory particle, base subcomplex GO:0009507|chloroplast
pt2_03304	A	A1S	Potri.001G314400	Potri.001G314400(AS)	POPTR_0001s32160	sp|Q56YJ8|FAMA_ARATH	Transcription factor FAMA OS=Arabidopsis thaliana GN=FMA PE=1 SV=1	AT3G24140.1	| Symbols: FMA | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr3:8715525-8717772 REVERSE LENGTH=414	LOC_Os03g08930.1	protein|helix-loop-helix DNA-binding protein, putative, expressed	IMGA|Medtr1g082480.1	Transcription factor bHLH94 chr1 21189984-21188661 F EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0006355|regulation of transcription, DNA-dependent GO:0006612|protein targeting to membrane GO:0009617|response to bacterium GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009965|leaf morphogenesis GO:0010052|guard cell differentiation GO:0010103|stomatal complex morphogenesis GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0030154|cell differentiation GO:0031348|negative regulation of defense response GO:0035304|regulation of protein dephosphorylation GO:0045597|positive regulation of cell differentiation GO:0045893|positive regulation of transcription, DNA-dependent GO:0051782|negative regulation of cell division	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_03305	A	A1S	Potri.001G314500	Potri.001G314500(AS)	POPTR_0001s32170	sp|Q9FKC0|R13A4_ARATH	60S ribosomal protein L13a-4 OS=Arabidopsis thaliana GN=RPL13AD PE=2 SV=1	AT5G48760.2	| Symbols: | Ribosomal protein L13 family protein | chr5:19771315-19772686 REVERSE LENGTH=206	LOC_Os03g54890.1	protein|ribosomal protein L13, putative, expressed	IMGA|Medtr5g083790.1	60S ribosomal protein L13A chr5 35138693-35136475 F EGN_Mt100125 20111014	GO:0001510|RNA methylation GO:0006412|translation GO:0009664|plant-type cell wall organization GO:0042545|cell wall modification	GO:0003735|structural constituent of ribosome	GO:0005737|cytoplasm GO:0005840|ribosome GO:0015934|large ribosomal subunit GO:0022625|cytosolic large ribosomal subunit GO:0022626|cytosolic ribosome
pt2_03306	A	A1S	Potri.001G314600	Potri.001G314600(AS)	POPTR_0001s32180	sp|Q4PSN0|PME29_ARATH	Probable pectinesterase 29 OS=Arabidopsis thaliana GN=PME29 PE=2 SV=1	AT3G24130.1	| Symbols: | Pectin lyase-like superfamily protein | chr3:8711663-8713361 REVERSE LENGTH=335	LOC_Os01g19440.1	protein|pectinesterase, putative, expressed	IMGA|contig_10285_1.1	Pectinesterase contig_10285 2202-1273 H PREDN 20111014	GO:0042545|cell wall modification	GO:0030599|pectinesterase activity	GO:0005576|extracellular region GO:0005618|cell wall GO:0009505|plant-type cell wall
pt2_03307	A	A1S	Potri.001G314700	Potri.001G314700(AS)	POPTR_0001s32190	sp|O14138|MIDA_SCHPO	Protein midA homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC25A8.03c PE=2 SV=2	AT1G04900.1	| Symbols: | Protein of unknown function (DUF185) | chr1:1383912-1387561 FORWARD LENGTH=442	LOC_Os01g68390.1	protein|Uncharacterized ACR, COG1565 containing protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_03308	A	A1S	Potri.001G314800	Potri.001G314800(AS)	POPTR_0001s32200	sp|Q9SAK5|APL_ARATH	Myb family transcription factor APL OS=Arabidopsis thaliana GN=APL PE=2 SV=2	AT4G13640.1	| Symbols: UNE16 | Homeodomain-like superfamily protein | chr4:7936864-7938497 REVERSE LENGTH=292	LOC_Os02g07770.1	protein|Myb transcription factor, putative, expressed	IMGA|Medtr5g027440.1	Myb family transcription factor-related protein chr5 11161185-11157775 H EGN_Mt100125 20111014	GO:0009567|double fertilization forming a zygote and endosperm	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_03309	A	A1S	Potri.001G314900	Potri.001G314900(AS)	POPTR_0001s32210	sp|Q9LRN6|CML22_ARATH	Probable calcium-binding protein CML22 OS=Arabidopsis thaliana GN=CML22 PE=3 SV=1	AT3G24110.1	| Symbols: | Calcium-binding EF-hand family protein | chr3:8704429-8705413 REVERSE LENGTH=229	LOC_Os06g40720.1	protein|EF hand family protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0005509|calcium ion binding	GO:0005575|cellular_component GO:0005886|plasma membrane
pt2_03310	A	A1S	Potri.001G315000	Potri.001G315000(AS)	POPTR_0001s32220	sp|O48837|LRKS2_ARATH	Receptor like protein kinase S.2 OS=Arabidopsis thaliana GN=LECRKS2 PE=2 SV=2	AT2G32800.1	| Symbols: AP4.3A | protein kinase family protein | chr2:13916478-13919033 FORWARD LENGTH=851	LOC_Os11g25860.1	protein|protein Kinase, putative, expressed	IMGA|Medtr5g077100.1	Lectin receptor kinase-like protein chr5 31903098-31900697 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_03311	C	C1S	Potri.001G315100	Potri.001G315100(CS)	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03312	C	C1S	Potri.001G315200	Potri.001G315200(CS)	sp|Q9MAT6|HMG15_ARATH	High mobility group B protein 15 OS=Arabidopsis thaliana GN=HMGB15 PE=2 SV=1	AT1G04880.1	| Symbols: | HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain | chr1:1376106-1378264 REVERSE LENGTH=448	LOC_Os02g27060.1	protein|high mobility group, putative, expressed	NA	NA	GO:0006333|chromatin assembly or disassembly GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005622|intracellular GO:0005634|nucleus
pt2_03313	A	A1S	Potri.001G315300	Potri.001G315300(AS)	POPTR_0001s32250	sp|Q9SVQ0|ERF62_ARATH	Ethylene-responsive transcription factor ERF062 OS=Arabidopsis thaliana GN=ERF062 PE=2 SV=1	AT4G13620.1	| Symbols: | Integrase-type DNA-binding superfamily protein | chr4:7932138-7933304 FORWARD LENGTH=388	LOC_Os02g51670.1	protein|ethylene-responsive transcription factor, putative, expressed	IMGA|Medtr5g062700.1	Ethylene-responsive transcription factor RAP2-4 chr5 25273709-25276211 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_03314	A	A1S	Potri.001G315400	Potri.001G315400(AS)	POPTR_0001s32260	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_03315	A	A1S	Potri.001G315500	Potri.001G315500(AS)	POPTR_0001s32270	sp|Q6GKX7|GASAC_ARATH	Gibberellin-regulated protein 12 OS=Arabidopsis thaliana GN=GASA12 PE=2 SV=1	AT2G30810.1	| Symbols: | Gibberellin-regulated family protein | chr2:13127945-13128630 REVERSE LENGTH=106	LOC_Os10g02625.1	protein|gibberellin regulated protein, putative, expressed	IMGA|Medtr5g036720.1	GAST1 chr5 15620417-15621010 H EGN_Mt100125 20111014	GO:0009739|response to gibberellin stimulus	NA	GO:0005576|extracellular region
pt2_03316	A	A1S	Potri.001G315600	Potri.001G315600(AS)	POPTR_0001s32280	sp|Q8W4N3|UBP2_ARATH	Ubiquitin carboxyl-terminal hydrolase 2 OS=Arabidopsis thaliana GN=UBP2 PE=1 SV=2	AT1G04860.1	| Symbols: UBP2, ATUBP2 | ubiquitin-specific protease 2 | chr1:1369306-1372290 REVERSE LENGTH=961	LOC_Os09g32740.1	protein|ubiquitin carboxyl-terminal hydrolase family protein, expressed	IMGA|Medtr5g030360.2	Ubiquitin carboxyl-terminal hydrolase chr5 12508488-12504846 E EGN_Mt100125 20111014	GO:0006511|ubiquitin-dependent protein catabolic process	GO:0004221|ubiquitin thiolesterase activity GO:0004843|ubiquitin-specific protease activity GO:0008270|zinc ion binding	GO:0000502|proteasome complex GO:0005634|nucleus GO:0009507|chloroplast
pt2_03317	A	A1S	Potri.001G315700	Potri.001G315700(AS)	POPTR_0001s32290	sp|Q9FNQ2|E13L2_ARATH	Glucan endo-1,3-beta-glucosidase-like protein 2 OS=Arabidopsis thaliana GN=At5g61130 PE=1 SV=1	AT4G13600.1	| Symbols: | Carbohydrate-binding X8 domain superfamily protein | chr4:7911179-7912892 REVERSE LENGTH=231	LOC_Os02g29980.1	protein|X8 domain containing protein, expressed	IMGA|Medtr5g085580.1	"Glucan endo-1,3-beta-glucosidase" chr5 35975309-35973056 F EGN_Mt100125 20111014	NA	NA	GO:0005886|plasma membrane
pt2_03318	A	A1S	Potri.001G315800	Potri.001G315800(AS)	POPTR_0001s32300	sp|Q9ZTN2|ERD2_PETHY	ER lumen protein retaining receptor OS=Petunia hybrida GN=ERD2 PE=2 SV=1	AT3G25040.1	| Symbols: ERD2B | endoplasmic reticulum retention defective 2B | chr3:9124479-9126051 FORWARD LENGTH=215	LOC_Os04g30800.2	protein|ER lumen protein retaining receptor, putative, expressed	IMGA|contig_77467_1.1	ER lumen retaining receptor family-like protein contig_77467 210-1675 H PREDN 20111014	GO:0006084|acetyl-CoA metabolic process GO:0006621|protein retention in ER lumen GO:0010204|defense response signaling pathway, resistance gene-independent GO:0015031|protein transport GO:0016126|sterol biosynthetic process GO:0016132|brassinosteroid biosynthetic process GO:0030244|cellulose biosynthetic process GO:0048193|Golgi vesicle transport	GO:0004872|receptor activity GO:0046923|ER retention sequence binding	GO:0005739|mitochondrion GO:0005794|Golgi apparatus GO:0016021|integral to membrane
pt2_03319	D	D1S	Potri.001G119600	Potri.001G119600(DS)	POPTR_0001s32310	NA	NA	NA	NA	LOC_Os08g34300.1	protein|retrotransposon protein, putative, unclassified, expressed	NA	NA	NA	NA	NA
pt2_03320	A	A1S	Potri.001G315900	Potri.001G315900(AS)	POPTR_0001s32320	NA	NA	AT2G04235.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; Has 713 Blast hits to 345 proteins in 122 species: Archae - 2; Bacteria - 262; Metazoa - 138; Fungi - 55; Plants - 39; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). | chr2:1449414-1455018 FORWARD LENGTH=1253	LOC_Os06g40590.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03321	R	R	NA	NA	POPTR_0001s32330	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03322	A	A1S	Potri.001G316100	Potri.001G316100(AS)	POPTR_0001s32340	NA	NA	AT4G20330.1	| Symbols: | Transcription initiation factor TFIIE, beta subunit | chr4:10982683-10984039 REVERSE LENGTH=286	LOC_Os10g25770.2	protein|transcription initiation factor IIE subunit beta, putative, expressed	IMGA|Medtr5g010620.2	General transcription factor IIE subunit chr5 2639138-2634320 F EGN_Mt100125 20111014	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0006366|transcription from RNA polymerase II promoter GO:0006367|transcription initiation from RNA polymerase II promoter	NA	GO:0005634|nucleus GO:0005673|transcription factor TFIIE complex
pt2_03323	A	A1S	Potri.001G316200	Potri.001G316200(AS)	POPTR_0001s32350	sp|Q9LFQ3|SNL2_ARATH	Paired amphipathic helix protein Sin3-like 2 OS=Arabidopsis thaliana GN=SNL2 PE=1 SV=2	AT3G01320.2	| Symbols: SNL1 | SIN3-like 1 | chr3:106730-113197 FORWARD LENGTH=1360	LOC_Os01g01960.1	protein|transcriptional repressor, putative, expressed	IMGA|Medtr5g036670.1	Paired amphipathic helix protein Sin3 chr5 15609363-15594913 E EGN_Mt100125 20111014	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0006355|regulation of transcription, DNA-dependent GO:0007346|regulation of mitotic cell cycle GO:0010048|vernalization response GO:0010228|vegetative to reproductive phase transition of meristem GO:0010413|glucuronoxylan metabolic process GO:0016926|protein desumoylation GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0045492|xylan biosynthetic process GO:0045892|negative regulation of transcription, DNA-dependent GO:0048440|carpel development GO:0050665|hydrogen peroxide biosynthetic process	GO:0003674|molecular_function GO:0005515|protein binding	GO:0005634|nucleus
pt2_03324	A	A1S	Potri.001G316300	Potri.001G316300(AS)	POPTR_0001s32360	sp|Q9SRH9|SNL1_ARATH	Paired amphipathic helix protein Sin3-like 1 OS=Arabidopsis thaliana GN=SNL1 PE=1 SV=2	AT3G01320.2	| Symbols: SNL1 | SIN3-like 1 | chr3:106730-113197 FORWARD LENGTH=1360	LOC_Os05g01020.2	protein|transcriptional repressor, putative, expressed	IMGA|Medtr5g036670.1	Paired amphipathic helix protein Sin3 chr5 15609363-15594913 E EGN_Mt100125 20111014	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0006355|regulation of transcription, DNA-dependent GO:0007346|regulation of mitotic cell cycle GO:0010048|vernalization response GO:0010228|vegetative to reproductive phase transition of meristem GO:0010413|glucuronoxylan metabolic process GO:0016926|protein desumoylation GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0045492|xylan biosynthetic process GO:0045892|negative regulation of transcription, DNA-dependent GO:0048440|carpel development GO:0050665|hydrogen peroxide biosynthetic process	GO:0003674|molecular_function GO:0005515|protein binding	GO:0005634|nucleus
pt2_03325	A	A1S	Potri.001G316400	Potri.001G316400(AS)	POPTR_0001s32370	NA	NA	AT1G04850.1	| Symbols: | ubiquitin-associated (UBA)/TS-N domain-containing protein | chr1:1365311-1368706 REVERSE LENGTH=413	LOC_Os02g30180.1	protein|ZOS2-07 - C2H2 zinc finger protein, expressed	NA	NA	GO:0006486|protein glycosylation GO:0006623|protein targeting to vacuole GO:0008150|biological_process	GO:0008270|zinc ion binding	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_03326	A	A1S	Potri.001G316500	Potri.001G316500(AS)	POPTR_0001s32380	sp|Q9MAT2|PPR10_ARATH	Pentatricopeptide repeat-containing protein At1g04840 OS=Arabidopsis thaliana GN=PCMP-H64 PE=2 SV=1	AT1G04840.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:1362867-1364962 REVERSE LENGTH=665	LOC_Os07g44299.1	protein|pentatricopeptide, putative, expressed	IMGA|contig_53197_3.1	Pentatricopeptide repeat protein contig_53197 10365-8485 H PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_03327	A	A2S	Potri.001G316600	Potri.001G316600(AS) Potri.001G316500(AA)	POPTR_0001s32390	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03328	A	A2S	Potri.001G316700	Potri.001G316700(AS) Potri.017G057100(DS)	POPTR_0001s32400	sp|Q9NVG8|TBC13_HUMAN	TBC1 domain family member 13 OS=Homo sapiens GN=TBC1D13 PE=1 SV=3	AT4G13730.1	| Symbols: | Ypt/Rab-GAP domain of gyp1p superfamily protein | chr4:7970299-7974055 FORWARD LENGTH=449	LOC_Os01g68010.1	protein|TBC domain containing protein, expressed	NA	NA	GO:0032313|regulation of Rab GTPase activity	GO:0005097|RAB GTPase activator activity	GO:0005622|intracellular GO:0005634|nucleus
pt2_03329	C	C1A	Potri.001G316700	Potri.001G316700(CA)	sp|Q9NVG8|TBC13_HUMAN	TBC1 domain family member 13 OS=Homo sapiens GN=TBC1D13 PE=1 SV=3	AT4G13730.1	| Symbols: | Ypt/Rab-GAP domain of gyp1p superfamily protein | chr4:7970299-7974055 FORWARD LENGTH=449	LOC_Os01g68010.1	protein|TBC domain containing protein, expressed	NA	NA	GO:0032313|regulation of Rab GTPase activity	GO:0005097|RAB GTPase activator activity	GO:0005622|intracellular GO:0005634|nucleus
pt2_03330	A	A1S	Potri.001G316800	Potri.001G316800(AS)	POPTR_0001s32420	sp|Q8W486|Y1491_ARATH	DUF246 domain-containing protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=1 SV=1	AT1G04910.1	| Symbols: | O-fucosyltransferase family protein | chr1:1388101-1391074 REVERSE LENGTH=519	LOC_Os11g29120.1	protein|growth regulator related protein, putative, expressed	IMGA|Medtr1g101990.1	DUF246 domain-containing protein chr1 30223446-30229543 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0016757|transferase activity, transferring glycosyl groups	GO:0005739|mitochondrion GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_03331	A	A1S	Potri.001G316900	Potri.001G316900(AS)	POPTR_0001s32430	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_03332	A	A1S	Potri.001G317000	Potri.001G317000(AS)	POPTR_0001s32440	sp|Q1PEB4|Y4498_ARATH	Uncharacterized protein At4g04980 OS=Arabidopsis thaliana GN=At4g04980 PE=2 SV=1	AT4G04980.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G11070.1); Has 23100 Blast hits to 15699 proteins in 1063 species: Archae - 116; Bacteria - 2262; Metazoa - 8308; Fungi - 3268; Plants - 3181; Viruses - 958; Other Eukaryotes - 5007 (source: NCBI BLink). | chr4:2544210-2547893 REVERSE LENGTH=880	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_03333	A	A1S	Potri.001G317200	Potri.001G317200(AS)	POPTR_0001s32460	NA	NA	AT4G13750.1	| Symbols: NOV | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein | chr4:7975191-7987558 FORWARD LENGTH=2729	LOC_Os03g58910.2	protein|expressed protein	NA	NA	GO:0001708|cell fate specification GO:0009790|embryo development GO:0009926|auxin polar transport GO:0010305|leaf vascular tissue pattern formation GO:0019827|stem cell maintenance GO:0048364|root development	GO:0005524|ATP binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_03334	A	A1S	Potri.001G317300	Potri.001G317300(AS)	POPTR_0001s32470	NA	NA	AT5G49210.2	| Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:19950093-19951464 FORWARD LENGTH=195	NA	NA	IMGA|Medtr1g025570.1	hypothetical protein chr1 8296517-8295501 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_03335	B	B1S	Potri.001G317300	Potri.001G317300(BS)	POPTR_0001s32470	NA	NA	AT5G49210.2	| Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:19950093-19951464 FORWARD LENGTH=195	NA	NA	IMGA|Medtr1g025570.1	hypothetical protein chr1 8296517-8295501 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_03336	A	A1S	Potri.001G317300	Potri.001G317300(AS)	POPTR_0001s32470	NA	NA	AT5G49210.2	| Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:19950093-19951464 FORWARD LENGTH=195	NA	NA	IMGA|Medtr1g025570.1	hypothetical protein chr1 8296517-8295501 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_03337	A	A1S	Potri.001G317400	Potri.001G317400(AS)	POPTR_0001s32480	sp|Q9D099|ACER3_MOUSE	Alkaline ceramidase 3 OS=Mus musculus GN=Acer3 PE=2 SV=1	AT4G22330.1	| Symbols: ATCES1 | Alkaline phytoceramidase (aPHC) | chr4:11798483-11799549 FORWARD LENGTH=255	LOC_Os03g49180.1	protein|alkaline phytoceramidase, putative, expressed	NA	NA	GO:0006672|ceramide metabolic process	GO:0003824|catalytic activity GO:0016811|hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	GO:0005783|endoplasmic reticulum GO:0005794|Golgi apparatus GO:0016020|membrane GO:0016021|integral to membrane
pt2_03338	A	A1S	Potri.001G317500	Potri.001G317500(AS)	POPTR_0001s32490	sp|Q9ZTS1|SYM_ORYSJ	Probable methionine--tRNA ligase OS=Oryza sativa subsp. japonica GN=Os06g0508700 PE=2 SV=2	AT4G13780.1	| Symbols: | methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative | chr4:7993366-7998433 REVERSE LENGTH=797	LOC_Os06g31210.1	protein|methionyl-tRNA synthetase, putative, expressed	IMGA|contig_54958_1.1	Methionyl-tRNA synthetase contig_54958 2965-179 E PREDN 20111014	GO:0006418|tRNA aminoacylation for protein translation GO:0006431|methionyl-tRNA aminoacylation GO:0046686|response to cadmium ion	GO:0000049|tRNA binding GO:0000166|nucleotide binding GO:0004812|aminoacyl-tRNA ligase activity GO:0004825|methionine-tRNA ligase activity GO:0005524|ATP binding	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_03339	A	A2S	Potri.001G317600	Potri.001G317600(AS) Potri.017G057800(DS)	POPTR_0001s32500	sp|Q8RY24|SPSA3_ARATH	Probable sucrose-phosphate synthase 3 OS=Arabidopsis thaliana GN=SPS3 PE=2 SV=1	AT1G04920.1	| Symbols: ATSPS3F, SPS3F | sucrose phosphate synthase 3F | chr1:1391674-1395756 REVERSE LENGTH=1062	LOC_Os01g69030.3	protein|sucrose-phosphate synthase, putative, expressed	IMGA|Medtr5g091340.1	Sucrose-phosphate synthase chr5 38770310-38775393 E EGN_Mt100125 20111014	GO:0001666|response to hypoxia GO:0005985|sucrose metabolic process GO:0009058|biosynthetic process GO:0019375|galactolipid biosynthetic process	GO:0016757|transferase activity, transferring glycosyl groups GO:0046524|sucrose-phosphate synthase activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03340	A	A1S	Potri.001G317700	Potri.001G317700(AS)	POPTR_0001s32510	sp|A5PK19|MET13_BOVIN	Methyltransferase-like protein 13 OS=Bos taurus GN=METTL13 PE=2 SV=1	AT2G31740.1	| Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr2:13491053-13495009 REVERSE LENGTH=760	LOC_Os04g31000.1	protein|methyltransferase domain containing protein, expressed	NA	NA	GO:0008152|metabolic process	GO:0008168|methyltransferase activity	GO:0005739|mitochondrion
pt2_03341	C	C1S	Potri.001G317800	Potri.001G317800(CS)	NA	NA	NA	NA	NA	NA	NA	NA	GO:0009414|response to water deprivation GO:0009651|response to salt stress GO:0009926|auxin polar transport GO:0010248|establishment or maintenance of transmembrane electrochemical gradient GO:0015992|proton transport GO:0048366|leaf development	GO:0004427|inorganic diphosphatase activity GO:0009678|hydrogen-translocating pyrophosphatase activity	GO:0000325|plant-type vacuole GO:0005739|mitochondrion GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009705|plant-type vacuole membrane GO:0009941|chloroplast envelope GO:0010008|endosome membrane GO:0016020|membrane
pt2_03342	A	A1S	Potri.001G317900	Potri.001G317900(AS)	POPTR_0001s32530	NA	NA	AT3G23910.1	| Symbols: | BEST Arabidopsis thaliana protein match is: RNA-directed DNA polymerase (reverse transcriptase)-related family protein (TAIR:AT3G24255.2); Has 562 Blast hits to 532 proteins in 147 species: Archae - 28; Bacteria - 51; Metazoa - 157; Fungi - 82; Plants - 85; Viruses - 6; Other Eukaryotes - 153 (source: NCBI BLink). | chr3:8636594-8639344 REVERSE LENGTH=421	LOC_Os04g31050.1	protein|expressed protein	NA	NA	GO:0006979|response to oxidative stress	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03343	G	G2	NA	NA	POPTR_0001s32540	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03344	R	R	NA	NA	POPTR_0001s32550	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03345	R	R	NA	NA	POPTR_0001s32560	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03346	G	G1	NA	NA	POPTR_0001s32570	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03347	A	A1S	Potri.001G318400	Potri.001G318400(AS)	POPTR_0001s32580	sp|Q8GXC7|FBK50_ARATH	F-box/kelch-repeat protein At3g06240 OS=Arabidopsis thaliana GN=At3g06240 PE=2 SV=1	AT3G06240.1	| Symbols: | F-box family protein | chr3:1887336-1888619 FORWARD LENGTH=427	LOC_Os12g06740.2	protein|OsFBX440 - F-box domain containing protein, expressed	IMGA|Medtr5g057710.1	F-box/kelch-repeat protein chr5 23154021-23150056 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_03348	A	A1S	Potri.001G318500	Potri.001G318500(AS)	POPTR_0001s32590	sp|Q8GYF4|PHT15_ARATH	Probable inorganic phosphate transporter 1-5 OS=Arabidopsis thaliana GN=PHT1-5 PE=2 SV=2	AT2G32830.1	| Symbols: PHT5, PHT1;5 | phosphate transporter 1;5 | chr2:13927754-13929657 REVERSE LENGTH=542	LOC_Os04g10750.3	protein|inorganic phosphate transporter, putative, expressed	IMGA|Medtr1g043290.1	Inorganic phosphate transporter 1-1 chr1 12497182-12501214 E EGN_Mt100125 20111014	GO:0006817|phosphate ion transport GO:0055085|transmembrane transport	GO:0005315|inorganic phosphate transmembrane transporter activity GO:0015114|phosphate ion transmembrane transporter activity GO:0022857|transmembrane transporter activity	GO:0005737|cytoplasm GO:0016021|integral to membrane
pt2_03349	A	A1S	Potri.001G318600	Potri.001G318600(AS)	POPTR_0001s32600	NA	NA	NA	NA	NA	NA	IMGA|Medtr5g079680.1	hypothetical protein chr5 33066011-33064266 F EGN_Mt100125 20111014	NA	NA	NA
pt2_03350	A	A1S	Potri.001G318700	Potri.001G318700(AS)	POPTR_0001s32610	sp|Q3SWX0|NIPA2_BOVIN	Magnesium transporter NIPA2 OS=Bos taurus GN=NIPA2 PE=2 SV=1	AT4G13800.1	| Symbols: | Protein of unknown function (DUF803) | chr4:8002129-8003858 REVERSE LENGTH=336	LOC_Os01g65986.1	protein|DUF803 domain containing, putative, expressed	IMGA|Medtr5g090020.1	Magnesium transporter NIPA2 chr5 38124854-38117514 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005886|plasma membrane
pt2_03351	A	A1S	Potri.001G318800	Potri.001G318800(AS)	POPTR_0001s32620	sp|Q5XG71|UTP20_MOUSE	Small subunit processome component 20 homolog OS=Mus musculus GN=Utp20 PE=2 SV=2	AT4G30990.2	| Symbols: | ARM repeat superfamily protein | chr4:15084456-15097860 FORWARD LENGTH=2620	LOC_Os01g40250.1	protein|down-regulated in metastasis family protein, expressed	NA	NA	GO:0008150|biological_process	NA	GO:0005634|nucleus GO:0005794|Golgi apparatus
pt2_03352	A	A1S	Potri.001G319000	Potri.001G319000(AS)	POPTR_0001s32640	NA	NA	AT3G23900.2	| Symbols: | RNA recognition motif (RRM)-containing protein | chr3:8632717-8635852 REVERSE LENGTH=934	LOC_Os01g01150.3	protein|RNA recognition motif, putative, expressed	NA	NA	GO:0000226|microtubule cytoskeleton organization GO:0007155|cell adhesion GO:0008150|biological_process GO:0009887|organ morphogenesis GO:0009888|tissue development GO:0010090|trichome morphogenesis GO:0010228|vegetative to reproductive phase transition of meristem GO:0010638|positive regulation of organelle organization GO:0016926|protein desumoylation GO:0033044|regulation of chromosome organization GO:0045010|actin nucleation GO:0050665|hydrogen peroxide biosynthetic process	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_03353	A	A1S	Potri.001G319100	Potri.001G319100(AS)	POPTR_0001s32650	sp|Q9SDN0|DNJ20_ARATH	Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana GN=ATJ20 PE=2 SV=2	AT4G13830.2	| Symbols: J20 | DNAJ-like 20 | chr4:8011518-8012577 FORWARD LENGTH=197	LOC_Os01g01160.1	protein|heat shock protein DnaJ, putative, expressed	IMGA|contig_118335_1.1	Chaperone protein dnaJ contig_118335 679-1141 H PREDN 20111014	GO:0006457|protein folding GO:0006950|response to stress GO:0015996|chlorophyll catabolic process	GO:0031072|heat shock protein binding	GO:0005634|nucleus GO:0009507|chloroplast
pt2_03354	A	A1S	Potri.001G319200	Potri.001G319200(AS)	POPTR_0001s32660	sp|Q9FI78|HCT_ARATH	Hydroxycinnamoyl-Coenzyme A shikimate/quinate hydroxycinnamoyltransferase OS=Arabidopsis thaliana GN=HCT PE=2 SV=1	AT4G13840.1	| Symbols: | HXXXD-type acyl-transferase family protein | chr4:8014088-8016326 REVERSE LENGTH=428	LOC_Os04g52164.1	protein|transferase family protein, putative, expressed	IMGA|contig_124864_1.1	Fatty acid elongase-like protein (Cer2-like) contig_124864 662-1099 H PREDN 20111014	GO:0019761|glucosinolate biosynthetic process	GO:0016740|transferase activity GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0005737|cytoplasm
pt2_03355	B	B2S	Potri.001G319500	Potri.001G319500(BS) Potri.001G319600(DS)	POPTR_0001s32670	NA	NA	AT5G43490.1	| Symbols: | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:17468471-17469256 REVERSE LENGTH=185	LOC_Os03g63040.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_03356	G	G1	NA	NA	POPTR_0001s32680	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03357	A	A1S	Potri.001G319600	Potri.001G319600(AS)	POPTR_0001s32690	NA	NA	AT5G43490.1	| Symbols: | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:17468471-17469256 REVERSE LENGTH=185	LOC_Os03g63040.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_03358	R	R	NA	NA	POPTR_0001s32700	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03359	G	G1	NA	NA	POPTR_0001s32710	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03360	A	A1S	Potri.001G319900	Potri.001G319900(AS)	POPTR_0001s32720	sp|Q9SVM8|GRP2_ARATH	Glycine-rich RNA-binding protein 2, mitochondrial OS=Arabidopsis thaliana GN=GRP2 PE=1 SV=1	AT4G13850.4	| Symbols: ATGRP2 | glycine-rich RNA-binding protein 2 | chr4:8021314-8022065 FORWARD LENGTH=129	LOC_Os10g17454.3	protein|RNA recognition motif containing protein, expressed	IMGA|contig_61747_1.1	Polyadenylate-binding protein contig_61747 97-2534 F PREDN 20111014	GO:0006364|rRNA processing GO:0006970|response to osmotic stress GO:0009409|response to cold GO:0009845|seed germination	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003690|double-stranded DNA binding GO:0003697|single-stranded DNA binding GO:0003723|RNA binding GO:0005507|copper ion binding GO:0005524|ATP binding	GO:0005739|mitochondrion
pt2_03361	A	A1S	Potri.001G320000	Potri.001G320000(AS)	POPTR_0001s32730	sp|Q9LIS3|GAE6_ARATH	UDP-glucuronate 4-epimerase 6 OS=Arabidopsis thaliana GN=GAE6 PE=1 SV=1	AT3G23820.1	| Symbols: GAE6 | UDP-D-glucuronate 4-epimerase 6 | chr3:8603645-8605027 FORWARD LENGTH=460	LOC_Os08g41440.1	protein|UDP-glucuronate 4-epimerase, putative, expressed	IMGA|Medtr5g011940.1	UDP-glucuronate 4-epimerase chr5 3278323-3276221 H EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0006569|tryptophan catabolic process GO:0009225|nucleotide-sugar metabolic process GO:0009684|indoleacetic acid biosynthetic process GO:0044237|cellular metabolic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0005515|protein binding GO:0016857|racemase and epimerase activity, acting on carbohydrates and derivatives GO:0050378|UDP-glucuronate 4-epimerase activity GO:0050662|coenzyme binding	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_03362	A	A1S	Potri.001G320100	Potri.001G320100(AS)	POPTR_0001s32740	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03363	G	G1	NA	NA	POPTR_0001s32750	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03364	A	A1S	Potri.001G320300	Potri.001G320300(AS)	POPTR_0001s32760	sp|Q9SL02|RAD50_ARATH	DNA repair protein RAD50 OS=Arabidopsis thaliana GN=RAD50 PE=1 SV=2	AT2G31970.1	| Symbols: RAD50, ATRAD50 | DNA repair-recombination protein (RAD50) | chr2:13600657-13608815 FORWARD LENGTH=1316	LOC_Os02g29464.1	protein|RecF/RecN/SMC N terminal domain containing protein, expressed	NA	NA	GO:0000226|microtubule cytoskeleton organization GO:0000723|telomere maintenance GO:0006281|DNA repair GO:0006302|double-strand break repair GO:0006312|mitotic recombination GO:0006396|RNA processing GO:0006606|protein import into nucleus GO:0007267|cell-cell signaling GO:0007346|regulation of mitotic cell cycle GO:0009560|embryo sac egg cell differentiation GO:0009616|virus induced gene silencing GO:0009640|photomorphogenesis GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009909|regulation of flower development GO:0009933|meristem structural organization GO:0010048|vernalization response GO:0010162|seed dormancy process GO:0010182|sugar mediated signaling pathway GO:0010228|vegetative to reproductive phase transition of meristem GO:0010267|production of ta-siRNAs involved in RNA interference GO:0016233|telomere capping GO:0016567|protein ubiquitination GO:0019915|lipid storage GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0050826|response to freezing	GO:0004518|nuclease activity GO:0005524|ATP binding GO:0008270|zinc ion binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0030870|Mre11 complex
pt2_03365	A	A1S	Potri.001G320400	Potri.001G320400(AS)	POPTR_0001s32770	sp|Q54EW1|GLYC2_DICDI	Serine hydroxymethyltransferase 2 OS=Dictyostelium discoideum GN=shmt2 PE=3 SV=1	AT4G13930.1	| Symbols: SHM4 | serine hydroxymethyltransferase 4 | chr4:8048013-8050021 REVERSE LENGTH=471	LOC_Os12g22030.1	protein|serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed	IMGA|Medtr5g030950.1	Serine hydroxymethyltransferase chr5 12843132-12838759 F EGN_Mt100125 20111014	GO:0006544|glycine metabolic process GO:0006563|L-serine metabolic process GO:0046686|response to cadmium ion	GO:0003824|catalytic activity GO:0004372|glycine hydroxymethyltransferase activity GO:0030170|pyridoxal phosphate binding	GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane
pt2_03366	A	A1S	Potri.001G320500	Potri.001G320500(AS)	POPTR_0001s32780	sp|P35007|SAHH_CATRO	Adenosylhomocysteinase OS=Catharanthus roseus GN=SAHH PE=2 SV=1	AT4G13940.1	| Symbols: HOG1, EMB1395, SAHH1, MEE58, ATSAHH1 | S-adenosyl-L-homocysteine hydrolase | chr4:8054931-8056676 FORWARD LENGTH=485	LOC_Os11g26850.2	protein|erythronate-4-phosphate dehydrogenase, putative, expressed	NA	NA	GO:0006094|gluconeogenesis GO:0006096|glycolysis GO:0006346|methylation-dependent chromatin silencing GO:0006511|ubiquitin-dependent protein catabolic process GO:0006730|one-carbon metabolic process GO:0006833|water transport GO:0006972|hyperosmotic response GO:0007030|Golgi organization GO:0009266|response to temperature stimulus GO:0009651|response to salt stress GO:0009793|embryo development ending in seed dormancy GO:0009853|photorespiration GO:0016441|posttranscriptional gene silencing GO:0046686|response to cadmium ion GO:0048767|root hair elongation GO:0051049|regulation of transport GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	GO:0000166|nucleotide binding GO:0004013|adenosylhomocysteinase activity GO:0005507|copper ion binding	GO:0005737|cytoplasm GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005829|cytosol GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane GO:0048046|apoplast
pt2_03367	A	A1S	Potri.001G320700	Potri.001G320700(AS)	POPTR_0001s32790	NA	NA	AT3G23805.1	| Symbols: RALFL24 | ralf-like 24 | chr3:8586467-8586823 FORWARD LENGTH=118	LOC_Os01g15320.1	protein|RALFL9 - Rapid ALkalinization Factor RALF family protein precursor, expressed	NA	NA	GO:0007267|cell-cell signaling	GO:0004871|signal transducer activity	GO:0005576|extracellular region GO:0048046|apoplast
pt2_03368	A	A1S	Potri.001G320800	Potri.001G320800(AS)	POPTR_0001s32800	sp|Q8LEE9|FLA12_ARATH	Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana GN=FLA12 PE=2 SV=2	AT5G60490.1	| Symbols: FLA12 | FASCICLIN-like arabinogalactan-protein 12 | chr5:24325916-24326665 REVERSE LENGTH=249	LOC_Os01g06580.1	protein|fasciclin domain containing protein, expressed	IMGA|Medtr5g098060.1	Fasciclin-like arabinogalactan protein chr5 41894651-41896631 F EGN_Mt100125 20111014	NA	NA	GO:0005886|plasma membrane GO:0031225|anchored to membrane
pt2_03369	A	A1S	Potri.001G320900	Potri.001G320900(AS)	POPTR_0001s32810	sp|Q94BZ5|HSFA5_ARATH	Heat stress transcription factor A-5 OS=Arabidopsis thaliana GN=HSFA5 PE=2 SV=1	AT4G13980.1	| Symbols: AT-HSFA5, HSFA5 | winged-helix DNA-binding transcription factor family protein | chr4:8077519-8079247 REVERSE LENGTH=466	LOC_Os02g29340.1	protein|HSF-type DNA-binding domain containing protein, expressed	IMGA|Medtr5g029680.1	Heat stress transcription factor A-1d chr5 12231861-12227178 E EGN_Mt100125 20111014	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_03370	A	A1S	Potri.001G321000	Potri.001G321000(AS)	POPTR_0001s32820	sp|Q7XJ98|KATAM_ARATH	Xyloglucan galactosyltransferase KATAMARI1 OS=Arabidopsis thaliana GN=KAM1 PE=1 SV=1	AT4G13990.1	| Symbols: | Exostosin family protein | chr4:8084395-8085960 FORWARD LENGTH=521	LOC_Os03g05110.1	protein|xyloglucan galactosyltransferase KATAMARI1, putative, expressed	IMGA|Medtr5g055350.1	Xyloglucan galactosyltransferase KATAMARI1 chr5 22252119-22253462 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003824|catalytic activity	GO:0005618|cell wall GO:0005794|Golgi apparatus GO:0016020|membrane
pt2_03371	A	A1S	Potri.001G321100	Potri.001G321100(AS)	POPTR_0001s32830	sp|Q55DL2|MET18_DICDI	Histidine protein methyltransferase 1 homolog OS=Dictyostelium discoideum GN=DDB_G0270580 PE=3 SV=1	AT4G14000.1	| Symbols: | Putative methyltransferase family protein | chr4:8090851-8092347 FORWARD LENGTH=290	LOC_Os09g19570.1	protein|AGAP009532-PA, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_03372	A	A1S	Potri.001G321100	Potri.001G321100(AS)	POPTR_0001s32830	sp|Q55DL2|MET18_DICDI	Histidine protein methyltransferase 1 homolog OS=Dictyostelium discoideum GN=DDB_G0270580 PE=3 SV=1	AT4G14000.1	| Symbols: | Putative methyltransferase family protein | chr4:8090851-8092347 FORWARD LENGTH=290	LOC_Os09g19570.1	protein|AGAP009532-PA, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_03373	A	A1S	Potri.001G321100	Potri.001G321100(AS)	POPTR_0001s32830	sp|Q55DL2|MET18_DICDI	Histidine protein methyltransferase 1 homolog OS=Dictyostelium discoideum GN=DDB_G0270580 PE=3 SV=1	AT4G14000.1	| Symbols: | Putative methyltransferase family protein | chr4:8090851-8092347 FORWARD LENGTH=290	LOC_Os09g19570.1	protein|AGAP009532-PA, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_03374	A	A1S	Potri.001G321200	Potri.001G321200(AS)	POPTR_0001s32840	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03375	A	A1S	Potri.001G321300	Potri.001G321300(AS)	POPTR_0001s32850	NA	NA	AT4G14010.1	| Symbols: RALFL32 | ralf-like 32 | chr4:8093010-8093363 REVERSE LENGTH=117	NA	NA	NA	NA	GO:0007267|cell-cell signaling	GO:0004871|signal transducer activity	GO:0005576|extracellular region GO:0048046|apoplast
pt2_03376	A	A1S	Potri.001G321400	Potri.001G321400(AS)	POPTR_0001s32860	sp|Q9FXC7|FB79_ARATH	Putative F-box protein At1g67623 OS=Arabidopsis thaliana GN=At1g67623 PE=4 SV=1	AT1G67623.1	| Symbols: | F-box family protein | chr1:25342111-25343243 FORWARD LENGTH=296	NA	NA	IMGA|Medtr5g033770.1	F-box protein chr5 14146493-14147257 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_03377	C	C1S	Potri.001G321500	Potri.001G321500(CS)	NA	NA	NA	NA	NA	NA	NA	NA	GO:0007267|cell-cell signaling	GO:0004871|signal transducer activity	GO:0005576|extracellular region GO:0048046|apoplast
pt2_03378	A	A2S	Potri.001G321600	Potri.001G321600(AS) Potri.017G060000(DS)	POPTR_0001s32880	sp|O23264|SEBP1_ARATH	Selenium-binding protein 1 OS=Arabidopsis thaliana GN=SBP1 PE=1 SV=1	AT4G14030.2	| Symbols: SBP1 | selenium-binding protein 1 | chr4:8098121-8100165 REVERSE LENGTH=490	LOC_Os01g68770.1	protein|selenium-binding protein, putative, expressed	NA	NA	GO:0000103|sulfate assimilation GO:0042542|response to hydrogen peroxide GO:0046686|response to cadmium ion GO:0071291|cellular response to selenium ion	GO:0008430|selenium binding	GO:0005634|nucleus GO:0005829|cytosol GO:0009506|plasmodesma
pt2_03379	A	A1S	Potri.001G321700	Potri.001G321700(AS)	POPTR_0001s32890	sp|O23266|PP308_ARATH	Pentatricopeptide repeat-containing protein At4g14050, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H13 PE=2 SV=3	AT4G14050.1	| Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr4:8103645-8105483 REVERSE LENGTH=612	LOC_Os11g43934.2	protein|pentatricopeptide, putative, expressed	IMGA|Medtr1g073300.1	Pentatricopeptide repeat-containing protein chr1 18648764-18651151 H EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005739|mitochondrion GO:0016020|membrane
pt2_03380	B	B1S	Potri.001G321800	Potri.001G321800(BS)	POPTR_0001s32900	sp|Q9LK39|AAE16_ARATH	Probable acyl-activating enzyme 16, chloroplastic OS=Arabidopsis thaliana GN=AAE16 PE=2 SV=1	AT3G23790.1	| Symbols: AAE16 | AMP-dependent synthetase and ligase family protein | chr3:8575268-8581001 FORWARD LENGTH=722	LOC_Os03g62850.1	protein|AMP-binding enzyme, putative, expressed	IMGA|Medtr1g104810.1	Long chain fatty acid-CoA ligase chr1 30860458-30851433 F EGN_Mt100125 20111014	GO:0008152|metabolic process	GO:0003824|catalytic activity	GO:0009507|chloroplast GO:0009941|chloroplast envelope
pt2_03381	A	A1S	Potri.001G321900	Potri.001G321900(AS)	POPTR_0001s32910	sp|Q06915|EA6_ARATH	Probable glucan endo-1,3-beta-glucosidase A6 OS=Arabidopsis thaliana GN=A6 PE=2 SV=1	AT3G23770.1	| Symbols: | O-Glycosyl hydrolases family 17 protein | chr3:8565556-8567196 FORWARD LENGTH=476	LOC_Os09g32550.2	protein|glucan endo-1,3-beta-glucosidase precursor, putative, expressed	IMGA|Medtr5g085580.1	"Glucan endo-1,3-beta-glucosidase" chr5 35975309-35973056 F EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0010584|pollen exine formation	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0043169|cation binding	GO:0005886|plasma membrane
pt2_03382	A	A1S	Potri.001G322000	Potri.001G322000(AS)	POPTR_0001s32920	NA	NA	NA	NA	LOC_Os09g12050.1	protein|retrotransposon protein, putative, unclassified, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03383	A	A1S	Potri.001G322100	Potri.001G322100(AS)	POPTR_0001s32930	sp|Q9LW32|PP258_ARATH	Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2 SV=1	AT3G26782.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:9850594-9852682 FORWARD LENGTH=659	LOC_Os07g20420.1	protein|tetratricopeptide-like helical, putative, expressed	IMGA|Medtr5g095690.1	Pentatricopeptide repeat-containing protein chr5 40792756-40789774 H EGN_Mt100125 20111014	NA	NA	GO:0005739|mitochondrion
pt2_03384	A	A1S	Potri.001G322200	Potri.001G322200(AS)	POPTR_0001s32940	NA	NA	AT3G22790.1	| Symbols: | Kinase interacting (KIP1-like) family protein | chr3:8052446-8057888 REVERSE LENGTH=1728	LOC_Os10g28610.1	protein|KIP1, putative, expressed	IMGA|Medtr1g071540.1	Centromere protein chr1 17687422-17680824 E EGN_Mt100125 20111014	GO:0000226|microtubule cytoskeleton organization GO:0008150|biological_process GO:0009855|determination of bilateral symmetry GO:0009965|leaf morphogenesis GO:0010014|meristem initiation GO:0010073|meristem maintenance GO:0010089|xylem development GO:0042127|regulation of cell proliferation GO:0044036|cell wall macromolecule metabolic process	GO:0051015|actin filament binding	GO:0005884|actin filament GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_03385	A	A2S	Potri.001G322300	Potri.001G322300(AS) Potri.017G060800(BS)	POPTR_0001s32950	sp|Q8VEM8|MPCP_MOUSE	Phosphate carrier protein, mitochondrial OS=Mus musculus GN=Slc25a3 PE=1 SV=1	AT5G14040.1	| Symbols: PHT3;1 | phosphate transporter 3;1 | chr5:4531059-4532965 REVERSE LENGTH=375	LOC_Os04g37600.1	protein|phosphate carrier protein, mitochondrial precursor, putative, expressed	IMGA|Medtr5g024770.1	Mitochondrial phosphate carrier protein chr5 9708873-9712811 H EGN_Mt100125 20111014	GO:0006007|glucose catabolic process GO:0006098|pentose-phosphate shunt GO:0006810|transport GO:0009651|response to salt stress	NA	GO:0005618|cell wall GO:0005739|mitochondrion GO:0005743|mitochondrial inner membrane GO:0005774|vacuolar membrane GO:0009507|chloroplast GO:0016020|membrane
pt2_03386	G	G1	NA	NA	POPTR_0001s32960	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03387	A	A1S	Potri.001G322500	Potri.001G322500(AS)	POPTR_0001s32970	sp|Q9SDS7|VATC_ARATH	V-type proton ATPase subunit C OS=Arabidopsis thaliana GN=VHA-C PE=1 SV=1	AT1G12840.1	| Symbols: DET3, ATVHA-C | vacuolar ATP synthase subunit C (VATC) / V-ATPase C subunit / vacuolar proton pump C subunit (DET3) | chr1:4375584-4378220 FORWARD LENGTH=375	LOC_Os05g51530.2	protein|vacuolar ATP synthase subunit C, putative, expressed	NA	NA	GO:0000902|cell morphogenesis GO:0006007|glucose catabolic process GO:0006511|ubiquitin-dependent protein catabolic process GO:0006816|calcium ion transport GO:0007030|Golgi organization GO:0007033|vacuole organization GO:0009651|response to salt stress GO:0009809|lignin biosynthetic process GO:0009826|unidimensional cell growth GO:0009853|photorespiration GO:0009932|cell tip growth GO:0015991|ATP hydrolysis coupled proton transport GO:0016049|cell growth GO:0016051|carbohydrate biosynthetic process GO:0030243|cellulose metabolic process GO:0043255|regulation of carbohydrate biosynthetic process GO:0048193|Golgi vesicle transport GO:0048765|root hair cell differentiation GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	GO:0016820|hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances GO:0046961|proton-transporting ATPase activity, rotational mechanism	GO:0000221|vacuolar proton-transporting V-type ATPase, V1 domain GO:0000325|plant-type vacuole GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_03388	A	A1S	Potri.001G322600	Potri.001G322600(AS)	POPTR_0001s32980	sp|P0CH30|RING1_GOSHI	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=2 SV=1	AT5G08139.1	| Symbols: | RING/U-box superfamily protein | chr5:2616487-2617617 FORWARD LENGTH=376	LOC_Os10g34590.1	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr1g114320.1	RING finger protein chr1 33124623-33126845 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0008270|zinc ion binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03389	A	A1S	Potri.001G322700	Potri.001G322700(AS)	POPTR_0001s32990	sp|Q9LW31|FUS3_ARATH	B3 domain-containing transcription factor FUS3 OS=Arabidopsis thaliana GN=FUS3 PE=2 SV=2	AT3G26790.1	| Symbols: FUS3 | AP2/B3-like transcriptional factor family protein | chr3:9854025-9855748 REVERSE LENGTH=313	LOC_Os01g51610.1	protein|B3 DNA binding domain containing protein, expressed	IMGA|Medtr5g075410.1	B3 domain-containing transcription repressor VAL2 chr5 31062764-31057534 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0008284|positive regulation of cell proliferation GO:0009733|response to auxin stimulus GO:0009793|embryo development ending in seed dormancy GO:0010116|positive regulation of abscisic acid biosynthetic process GO:0010262|somatic embryogenesis GO:0010373|negative regulation of gibberellin biosynthetic process	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03390	A	A1S	Potri.001G322800	Potri.001G322800(AS)	POPTR_0001s33000	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03391	A	A1S	Potri.001G322900	Potri.001G322900(AS)	POPTR_0001s33010	sp|Q9LV26|FBL45_ARATH	Putative F-box/LRR-repeat protein At3g18150 OS=Arabidopsis thaliana GN=At3g18150 PE=4 SV=2	AT3G18150.1	| Symbols: | RNI-like superfamily protein | chr3:6217929-6219500 FORWARD LENGTH=456	LOC_Os08g05460.1	protein|OsFBL40 - F-box domain and LRR containing protein, expressed	IMGA|Medtr1g021820.1	F-box/FBD/LRR-repeat protein chr1 6737485-6734925 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03392	A	A1S	Potri.001G323000	Potri.001G323000(AS)	POPTR_0001s33020	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006626|protein targeting to mitochondrion GO:0008150|biological_process GO:0009560|embryo sac egg cell differentiation	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_03393	A	A1S	Potri.001G323100	Potri.001G323100(AS)	POPTR_0001s33030	sp|Q9LW29|AFB2_ARATH	Protein AUXIN SIGNALING F-BOX 2 OS=Arabidopsis thaliana GN=AFB2 PE=1 SV=1	AT3G26810.1	| Symbols: AFB2 | auxin signaling F-box 2 | chr3:9868342-9870464 FORWARD LENGTH=575	LOC_Os04g32460.2	protein|OsFBL16 - F-box domain and LRR containing protein, expressed	IMGA|Medtr5g065490.1	F-box family protein chr5 26557031-26559858 E EGN_Mt100125 20111014	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0002237|response to molecule of bacterial origin GO:0007165|signal transduction GO:0009086|methionine biosynthetic process GO:0010103|stomatal complex morphogenesis GO:0010152|pollen maturation GO:0048443|stamen development GO:0048527|lateral root development GO:0048573|photoperiodism, flowering GO:0071249|cellular response to nitrate GO:0080022|primary root development	GO:0004842|ubiquitin-protein ligase activity GO:0010011|auxin binding	GO:0005575|cellular_component GO:0005634|nucleus GO:0005774|vacuolar membrane
pt2_03394	C	C1S	Potri.001G323200	Potri.001G323200(CS)	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_03395	A	A1S	Potri.001G323300	Potri.001G323300(AS)	POPTR_0001s33050	sp|Q9LYV6|GEML5_ARATH	GEM-like protein 5 OS=Arabidopsis thaliana GN=At5g13200 PE=1 SV=1	AT5G13200.1	| Symbols: | GRAM domain family protein | chr5:4207081-4208079 FORWARD LENGTH=272	LOC_Os12g29400.1	protein|GRAM domain containing protein, expressed	IMGA|Medtr1g115130.1	GEM-like protein chr1 33325322-33326339 E EGN_Mt100125 20111014	GO:0008150|biological_process GO:0010286|heat acclimation	GO:0003674|molecular_function	GO:0005737|cytoplasm
pt2_03396	A	A2S	Potri.001G323400	Potri.001G323400(AS) Potri.017G061900(DS)	POPTR_0001s33070	NA	NA	AT5G14030.4	| Symbols: | translocon-associated protein beta (TRAPB) family protein | chr5:4526878-4528253 FORWARD LENGTH=195	LOC_Os01g01307.1	protein|translocon-associated protein beta domain containing protein, expressed	NA	NA	GO:0008150|biological_process GO:0009627|systemic acquired resistance GO:0034976|response to endoplasmic reticulum stress	GO:0003674|molecular_function	GO:0005576|extracellular region GO:0005774|vacuolar membrane GO:0005783|endoplasmic reticulum GO:0005794|Golgi apparatus GO:0009506|plasmodesma GO:0016021|integral to membrane
pt2_03397	B	B1S	Potri.001G323500	Potri.001G323500(BS)	POPTR_0001s33080	sp|O22800|COL14_ARATH	Zinc finger protein CONSTANS-LIKE 14 OS=Arabidopsis thaliana GN=COL14 PE=2 SV=2	AT2G33500.2	| Symbols: | B-box type zinc finger protein with CCT domain | chr2:14188159-14190046 REVERSE LENGTH=401	LOC_Os02g49230.5	protein|CCT/B-box zinc finger protein, putative, expressed	IMGA|Medtr5g069480.1	Zinc finger protein CONSTANS-like protein chr5 28470900-28474190 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_03398	A	A1S	Potri.001G323600	Potri.001G323600(AS)	POPTR_0001s33090	NA	NA	AT5G14020.1	| Symbols: | Endosomal targeting BRO1-like domain-containing protein | chr5:4523730-4525819 REVERSE LENGTH=401	LOC_Os11g31570.1	protein|expressed protein	NA	NA	GO:0006499|N-terminal protein myristoylation	NA	GO:0005773|vacuole
pt2_03399	A	A1S	Potri.001G323700	Potri.001G323700(AS)	POPTR_0001s33100	sp|B9GFG6|CSPLF_POPTR	CASP-like protein POPTRDRAFT_752786 OS=Populus trichocarpa GN=POPTRDRAFT_752786 PE=3 SV=1	AT4G15620.1	| Symbols: | Uncharacterised protein family (UPF0497) | chr4:8913935-8915531 FORWARD LENGTH=190	LOC_Os02g12760.1	protein|integral membrane protein, putative, expressed	IMGA|Medtr5g076480.1	hypothetical protein chr5 31632937-31630871 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_03400	A	A1S	Potri.001G323800	Potri.001G323800(AS)	POPTR_0001s33110	sp|Q9LW26|Y3684_ARATH	Acyltransferase-like protein At3g26840, chloroplastic OS=Arabidopsis thaliana GN=At3g26840 PE=1 SV=1	AT5G41120.1	| Symbols: | Esterase/lipase/thioesterase family protein | chr5:16455312-16459198 REVERSE LENGTH=684	LOC_Os09g33530.2	protein|expressed protein	NA	NA	GO:0008152|metabolic process	GO:0003824|catalytic activity GO:0016746|transferase activity, transferring acyl groups GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_03401	A	A1S	Potri.001G323900	Potri.001G323900(AS)	POPTR_0001s33120	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03402	A	A1S	Potri.001G324000	Potri.001G324000(AS)	POPTR_0001s33130	sp|Q9LW26|Y3684_ARATH	Acyltransferase-like protein At3g26840, chloroplastic OS=Arabidopsis thaliana GN=At3g26840 PE=1 SV=1	AT5G41130.1	| Symbols: | Esterase/lipase/thioesterase family protein | chr5:16459714-16463241 REVERSE LENGTH=688	LOC_Os09g33530.1	protein|expressed protein	NA	NA	GO:0008152|metabolic process	GO:0003824|catalytic activity GO:0016746|transferase activity, transferring acyl groups GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_03403	C	C1S	Potri.001G324100	Potri.001G324100(CS)	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006952|defense response	GO:0043531|ADP binding	GO:0005634|nucleus
pt2_03404	A	A1S	Potri.001G324200	Potri.001G324200(AS)	POPTR_0001s33160	sp|Q9LW26|Y3684_ARATH	Acyltransferase-like protein At3g26840, chloroplastic OS=Arabidopsis thaliana GN=At3g26840 PE=1 SV=1	AT5G41120.1	| Symbols: | Esterase/lipase/thioesterase family protein | chr5:16455312-16459198 REVERSE LENGTH=684	LOC_Os09g33530.1	protein|expressed protein	NA	NA	GO:0008152|metabolic process	GO:0003824|catalytic activity GO:0016746|transferase activity, transferring acyl groups GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_03405	A	A1S	Potri.001G324300	Potri.001G324300(AS)	POPTR_0001s33180	sp|A9H3K5|RL15_GLUDA	50S ribosomal protein L15 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=rplO PE=3 SV=1	AT5G64670.1	| Symbols: | Ribosomal protein L18e/L15 superfamily protein | chr5:25852535-25853880 REVERSE LENGTH=281	LOC_Os08g21840.1	protein|50S ribosomal protein L15, putative, expressed	NA	NA	GO:0006354|DNA-dependent transcription, elongation GO:0006412|translation GO:0009220|pyrimidine ribonucleotide biosynthetic process	GO:0003735|structural constituent of ribosome	GO:0005739|mitochondrion GO:0005840|ribosome GO:0015934|large ribosomal subunit
pt2_03406	A	A1S	Potri.001G324400	Potri.001G324400(AS)	POPTR_0001s33190	sp|Q9LW26|Y3684_ARATH	Acyltransferase-like protein At3g26840, chloroplastic OS=Arabidopsis thaliana GN=At3g26840 PE=1 SV=1	AT5G41130.1	| Symbols: | Esterase/lipase/thioesterase family protein | chr5:16459714-16463241 REVERSE LENGTH=688	LOC_Os09g33530.1	protein|expressed protein	NA	NA	GO:0008152|metabolic process	GO:0003824|catalytic activity GO:0016746|transferase activity, transferring acyl groups GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_03407	A	A1S	Potri.001G324500	Potri.001G324500(AS)	POPTR_0001s33200	sp|O04147|CPD_ARATH	Cyclic phosphodiesterase OS=Arabidopsis thaliana GN=At4g18930 PE=1 SV=1	AT4G18930.1	| Symbols: | RNA ligase/cyclic nucleotide phosphodiesterase family protein | chr4:10370797-10371885 FORWARD LENGTH=181	LOC_Os05g44170.1	protein|cyclic phosphodiesterase, putative, expressed	NA	NA	GO:0006388|tRNA splicing, via endonucleolytic cleavage and ligation GO:0016070|RNA metabolic process	GO:0003824|catalytic activity GO:0004112|cyclic-nucleotide phosphodiesterase activity	GO:0005622|intracellular GO:0005737|cytoplasm
pt2_03408	A	A1S	Potri.001G324600	Potri.001G324600(AS)	POPTR_0001s33210	sp|Q9FFX4|KNU_ARATH	Zinc finger protein KNUCKLES OS=Arabidopsis thaliana GN=KNU PE=1 SV=1	AT5G14010.1	| Symbols: KNU | C2H2 and C2HC zinc fingers superfamily protein | chr5:4522260-4522745 FORWARD LENGTH=161	LOC_Os07g40300.1	protein|ZOS7-10 - C2H2 zinc finger protein, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0009909|regulation of flower development GO:0010582|floral meristem determinacy	GO:0003676|nucleic acid binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_03409	A	A1S	Potri.001G324700	Potri.001G324700(AS)	POPTR_0001s33220	NA	NA	AT3G26890.5	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr3:9907456-9910463 REVERSE LENGTH=649	LOC_Os09g33520.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_03410	A	A1S	Potri.001G324800	Potri.001G324800(AS)	POPTR_0001s33230	sp|O22799|Y2349_ARATH	Uncharacterized protein At2g33490 OS=Arabidopsis thaliana GN=At2g33490 PE=1 SV=2	AT2G33490.1	| Symbols: | hydroxyproline-rich glycoprotein family protein | chr2:14183552-14187666 FORWARD LENGTH=623	LOC_Os04g32370.1	protein|hydroxyproline-rich glycoprotein family protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_03411	A	A1S	Potri.001G324900	Potri.001G324900(AS)	POPTR_0001s33240	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03412	A	A1S	Potri.001G325000	Potri.001G325000(AS)	POPTR_0001s33250	NA	NA	AT1G27435.1	| Symbols: | unknown protein; Has 16 Blast hits to 16 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:9527956-9528814 REVERSE LENGTH=81	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_03413	A	A1S	Potri.001G325100	Potri.001G325100(AS)	POPTR_0001s33260	sp|Q52QH4|NAC68_ORYSJ	NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1	AT5G13180.1	| Symbols: ANAC083, VNI2, NAC083 | NAC domain containing protein 83 | chr5:4196643-4197577 FORWARD LENGTH=252	LOC_Os01g60020.1	protein|NAC domain transcription factor, putative, expressed	IMGA|Medtr5g041940.1	NAC domain protein chr5 18013715-18012368 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006612|protein targeting to membrane GO:0007275|multicellular organismal development GO:0009651|response to salt stress GO:0009737|response to abscisic acid stimulus GO:0009741|response to brassinosteroid stimulus GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010089|xylem development GO:0010150|leaf senescence GO:0010363|regulation of plant-type hypersensitive response GO:0045892|negative regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_03414	A	A2S	Potri.001G325200	Potri.001G325200(AS) Potri.017G063500(DS)	POPTR_0001s33270	sp|Q9C104|GDE1_SCHPO	Glycerophosphodiester phosphodiesterase gde1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gde1 PE=1 SV=1	AT3G02040.1	| Symbols: SRG3 | senescence-related gene 3 | chr3:348505-349909 REVERSE LENGTH=361	LOC_Os02g31030.1	protein|glycerophosphoryl diester phosphodiesterase family protein, putative, expressed	NA	NA	GO:0006071|glycerol metabolic process GO:0006629|lipid metabolic process GO:0006817|phosphate ion transport GO:0016036|cellular response to phosphate starvation GO:0030643|cellular phosphate ion homeostasis GO:0046686|response to cadmium ion	GO:0008081|phosphoric diester hydrolase activity GO:0008889|glycerophosphodiester phosphodiesterase activity	GO:0005737|cytoplasm GO:0009536|plastid
pt2_03415	A	A1S	Potri.001G325300	Potri.001G325300(AS)	POPTR_0001s33280	sp|Q9LJF5|DRB3_ARATH	Double-stranded RNA-binding protein 3 OS=Arabidopsis thaliana GN=DRB3 PE=2 SV=1	AT3G26932.2	| Symbols: DRB3 | dsRNA-binding protein 3 | chr3:9930460-9931714 REVERSE LENGTH=359	LOC_Os05g05790.1	protein|double-stranded RNA binding motif containing protein, expressed	IMGA|Medtr1g100760.1	Double-stranded RNA binding protein chr1 29427524-29430324 H EGN_Mt100125 20111014	GO:0008150|biological_process GO:0010267|production of ta-siRNAs involved in RNA interference GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0051607|defense response to virus	GO:0003723|RNA binding GO:0003725|double-stranded RNA binding GO:0005515|protein binding	GO:0005622|intracellular GO:0005737|cytoplasm
pt2_03416	A	A1S	Potri.001G325400	Potri.001G325400(AS)	POPTR_0001s33290	sp|Q0WQK2|ZDHC9_ARATH	Probable S-acyltransferase At3g26935 OS=Arabidopsis thaliana GN=At3g26935 PE=1 SV=1	AT3G26935.1	| Symbols: | DHHC-type zinc finger family protein | chr3:9933001-9935218 REVERSE LENGTH=443	LOC_Os09g33450.1	protein|zinc finger DHHC domain-containing protein, putative, expressed	IMGA|Medtr1g098390.1	Palmitoyltransferase SWF1 chr1 28233746-28237541 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0008270|zinc ion binding	GO:0005886|plasma membrane
pt2_03417	A	A1S	Potri.001G325500	Potri.001G325500(AS)	POPTR_0001s33310	NA	NA	AT3G26950.1	| Symbols: | unknown protein; Has 27 Blast hits to 27 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:9941202-9943411 REVERSE LENGTH=548	LOC_Os11g31110.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_03418	A	A1S	Potri.001G325600	Potri.001G325600(AS)	POPTR_0001s33320	sp|O54922|EXOC7_RAT	Exocyst complex component 7 OS=Rattus norvegicus GN=Exoc7 PE=2 SV=1	AT5G13990.1	| Symbols: ATEXO70C2, EXO70C2 | exocyst subunit exo70 family protein C2 | chr5:4514680-4516767 REVERSE LENGTH=695	LOC_Os11g06700.1	protein|exo70 exocyst complex subunit, putative, expressed	IMGA|Medtr5g073450.1	Exocyst complex component chr5 30274154-30276420 E EGN_Mt100125 20111014	GO:0006887|exocytosis GO:0006904|vesicle docking involved in exocytosis GO:0009827|plant-type cell wall modification GO:0009860|pollen tube growth	NA	GO:0000145|exocyst GO:0005634|nucleus GO:0005829|cytosol
pt2_03419	A	A1S	Potri.001G325700	Potri.001G325700(AS)	POPTR_0001s33330	sp|Q9CSU0|RPR1B_MOUSE	Regulation of nuclear pre-mRNA domain-containing protein 1B OS=Mus musculus GN=Rprd1b PE=1 SV=2	AT3G26990.1	| Symbols: | ENTH/VHS family protein | chr3:9948426-9951557 REVERSE LENGTH=513	LOC_Os11g03570.1	protein|protein of unknown function, DUF618 domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_03420	A	A1S	Potri.001G325800	Potri.001G325800(AS)	POPTR_0001s33340	sp|Q7G8Y5|GRXC1_ORYSJ	Glutaredoxin-C1 OS=Oryza sativa subsp. japonica GN=GRXC1 PE=3 SV=1	AT3G02000.1	| Symbols: ROXY1 | Thioredoxin superfamily protein | chr3:332512-332922 REVERSE LENGTH=136	ChrUn.fgenesh.mRNA.94	protein|expressed protein	IMGA|Medtr1g015890.1	Glutaredoxin chr1 4511901-4512635 F EGN_Mt100125 20111014	GO:0009410|response to xenobiotic stimulus GO:0009617|response to bacterium GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0045454|cell redox homeostasis GO:0045892|negative regulation of transcription, DNA-dependent GO:0048441|petal development GO:0048446|petal morphogenesis GO:0048448|stamen morphogenesis GO:0048451|petal formation GO:0048453|sepal formation GO:0048455|stamen formation GO:0048653|anther development	GO:0005515|protein binding GO:0009055|electron carrier activity GO:0015035|protein disulfide oxidoreductase activity GO:0015036|disulfide oxidoreductase activity	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_03421	A	A1S	Potri.001G325900	Potri.001G325900(AS)	POPTR_0001s33350	sp|Q9LSD8|MUB4_ARATH	Membrane-anchored ubiquitin-fold protein 4 OS=Arabidopsis thaliana GN=MUB4 PE=1 SV=1	AT3G26980.1	| Symbols: MUB4 | membrane-anchored ubiquitin-fold protein 4 precursor | chr3:9946467-9947444 REVERSE LENGTH=120	LOC_Os04g32270.1	protein|membrane-anchored ubiquitin-fold protein, putative, expressed	IMGA|contig_58279_1.1	Membrane-anchored ubiquitin-fold protein contig_58279 1074-2212 E PREDN 20111014	NA	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005886|plasma membrane
pt2_03422	A	A1S	Potri.001G326000	Potri.001G326000(AS)	POPTR_0001s33360	sp|Q8S4W7|GAI1_VITVI	DELLA protein GAI1 OS=Vitis vinifera GN=GAI1 PE=2 SV=1	AT1G66350.1	| Symbols: RGL1, RGL | RGA-like 1 | chr1:24748327-24749862 FORWARD LENGTH=511	LOC_Os11g31100.1	protein|gibberellin response modulator protein, putative, expressed	IMGA|contig_52215_1.1	GAI-like protein contig_52215 101-2211 F PREDN 20111014	GO:0009651|response to salt stress GO:0009723|response to ethylene stimulus GO:0009737|response to abscisic acid stimulus GO:0009739|response to gibberellin stimulus GO:0009740|gibberellic acid mediated signaling pathway GO:0009845|seed germination GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009938|negative regulation of gibberellic acid mediated signaling pathway GO:0010162|seed dormancy process GO:0010325|raffinose family oligosaccharide biosynthetic process GO:0042538|hyperosmotic salinity response GO:0048444|floral organ morphogenesis GO:2000377|regulation of reactive oxygen species metabolic process	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_03423	A	A1S	Potri.001G326100	Potri.001G326100(AS)	POPTR_0001s33370	NA	NA	AT3G04900.1	| Symbols: | Heavy metal transport/detoxification superfamily protein | chr3:1349302-1349928 REVERSE LENGTH=208	NA	NA	NA	NA	GO:0030001|metal ion transport	GO:0046872|metal ion binding	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_03424	A	A2S	Potri.001G326200	Potri.001G326200(AS) Potri.017G068400(DS)	POPTR_0001s33380	NA	NA	AT5G41050.1	| Symbols: | Pollen Ole e 1 allergen and extensin family protein | chr5:16433478-16434076 REVERSE LENGTH=172	LOC_Os09g32988.1	protein|POEI18 - Pollen Ole e I allergen and extensin family protein precursor, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_03425	A	A1S	Potri.001G326300	Potri.001G326300(AS)	POPTR_0001s33390	sp|Q94CD1|HHT1_ARATH	Omega-hydroxypalmitate O-feruloyl transferase OS=Arabidopsis thaliana GN=HHT1 PE=1 SV=1	AT5G41040.1	| Symbols: | HXXXD-type acyl-transferase family protein | chr5:16431448-16433086 FORWARD LENGTH=457	LOC_Os11g31090.1	protein|transferase family protein, putative, expressed	IMGA|Medtr5g076700.1	Benzoyl coenzyme A benzyl alcohol benzoyl transferase chr5 31729976-31732699 H EGN_Mt100125 20111014	GO:0010167|response to nitrate GO:0010345|suberin biosynthetic process GO:0015706|nitrate transport GO:0052325|cell wall pectin biosynthetic process	GO:0016740|transferase activity GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups GO:0050734|hydroxycinnamoyltransferase activity	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_03426	A	A1S	Potri.001G326400	Potri.001G326400(AS)	POPTR_0001s33400	sp|P35685|RL7A_ORYSJ	60S ribosomal protein L7a OS=Oryza sativa subsp. japonica GN=RPL7A PE=2 SV=1	AT2G47610.1	| Symbols: | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | chr2:19529854-19531401 FORWARD LENGTH=257	LOC_Os09g32976.1	protein|ribosomal protein L7Ae, putative, expressed	IMGA|contig_52784_3.1	Ribosomal protein L7a contig_52784 6027-8464 F PREDN 20111014	GO:0001510|RNA methylation GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005730|nucleolus GO:0005737|cytoplasm GO:0005774|vacuolar membrane GO:0005829|cytosol GO:0009506|plasmodesma GO:0009507|chloroplast GO:0016020|membrane GO:0022625|cytosolic large ribosomal subunit GO:0022626|cytosolic ribosome GO:0030529|ribonucleoprotein complex
pt2_03427	A	A1S	Potri.001G326500	Potri.001G326500(AS)	POPTR_0001s33410	NA	NA	AT1G24300.1	| Symbols: | GYF domain-containing protein | chr1:8614515-8620420 REVERSE LENGTH=1495	LOC_Os01g69990.1	protein|GYF domain containing protein, putative, expressed	NA	NA	NA	NA	GO:0005737|cytoplasm GO:0009507|chloroplast
pt2_03428	A	A1S	Potri.001G326600	Potri.001G326600(AS)	POPTR_0001s33420	sp|Q9LSD6|ARP2_ARATH	Actin-related protein 2 OS=Arabidopsis thaliana GN=ARP2 PE=1 SV=1	AT3G27000.1	| Symbols: ARP2, ATARP2, WRM | actin related protein 2 | chr3:9952787-9955784 REVERSE LENGTH=389	LOC_Os08g28190.1	protein|actin, putative, expressed	IMGA|Medtr5g066400.2	Actin-related protein chr5 27024745-27037702 F EGN_Mt100125 20111014	GO:0000902|cell morphogenesis GO:0007015|actin filament organization GO:0009416|response to light stimulus GO:0009825|multidimensional cell growth GO:0010090|trichome morphogenesis GO:0030036|actin cytoskeleton organization	GO:0005200|structural constituent of cytoskeleton	GO:0005737|cytoplasm GO:0005885|Arp2/3 protein complex
pt2_03429	A	A1S	Potri.001G326700	Potri.001G326700(AS)	POPTR_0001s33430	NA	NA	AT1G24300.1	| Symbols: | GYF domain-containing protein | chr1:8614515-8620420 REVERSE LENGTH=1495	LOC_Os01g69990.1	protein|GYF domain containing protein, putative, expressed	NA	NA	NA	NA	GO:0005737|cytoplasm GO:0009507|chloroplast
pt2_03430	A	A1S	Potri.001G326900	Potri.001G326900(AS)	POPTR_0001s33440	sp|Q9FFB8|CHX3_ARATH	Cation/H(+) antiporter 3 OS=Arabidopsis thaliana GN=CHX3 PE=2 SV=1	AT5G22900.1	| Symbols: ATCHX3, CHX3 | cation/H+ exchanger 3 | chr5:7657224-7659868 FORWARD LENGTH=822	LOC_Os05g39600.1	protein|ATCHX15, putative, expressed	IMGA|Medtr5g074320.1	Cation proton exchanger chr5 30564741-30562130 H EGN_Mt100125 20111014	GO:0006812|cation transport GO:0006814|sodium ion transport GO:0010351|lithium ion transport GO:0055085|transmembrane transport	GO:0005451|monovalent cation:hydrogen antiporter activity GO:0015299|solute:hydrogen antiporter activity	GO:0016021|integral to membrane
pt2_03431	A	A1S	Potri.001G326800	Potri.001G326800(AS)	POPTR_0001s33450	sp|Q9FMU2|PP380_ARATH	Pentatricopeptide repeat-containing protein At5g14080 OS=Arabidopsis thaliana GN=At5g14080 PE=2 SV=2	AT5G14080.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:4543265-4545256 REVERSE LENGTH=634	LOC_Os03g56960.1	protein|PPR repeat domain containing protein, putative, expressed	IMGA|Medtr5g007250.1	Pentatricopeptide repeat-containing protein chr5 1020898-1025108 H EGN_Mt100125 20111014	GO:0008150|biological_process GO:0048573|photoperiodism, flowering	NA	GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_03432	A	A1S	Potri.001G326800	Potri.001G326800(AS)	POPTR_0001s33450	sp|Q9FMU2|PP380_ARATH	Pentatricopeptide repeat-containing protein At5g14080 OS=Arabidopsis thaliana GN=At5g14080 PE=2 SV=2	AT5G14080.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:4543265-4545256 REVERSE LENGTH=634	LOC_Os03g56960.1	protein|PPR repeat domain containing protein, putative, expressed	IMGA|Medtr5g007250.1	Pentatricopeptide repeat-containing protein chr5 1020898-1025108 H EGN_Mt100125 20111014	GO:0008150|biological_process GO:0048573|photoperiodism, flowering	NA	GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_03433	A	A1S	Potri.001G326800	Potri.001G326800(AS)	POPTR_0001s33450	sp|Q9FMU2|PP380_ARATH	Pentatricopeptide repeat-containing protein At5g14080 OS=Arabidopsis thaliana GN=At5g14080 PE=2 SV=2	AT5G14080.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:4543265-4545256 REVERSE LENGTH=634	LOC_Os03g56960.1	protein|PPR repeat domain containing protein, putative, expressed	IMGA|Medtr5g007250.1	Pentatricopeptide repeat-containing protein chr5 1020898-1025108 H EGN_Mt100125 20111014	GO:0008150|biological_process GO:0048573|photoperiodism, flowering	NA	GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_03434	A	A1S	Potri.001G327000	Potri.001G327000(AS)	POPTR_0001s33460	NA	NA	AT3G01990.1	| Symbols: ACR6 | ACT domain repeat 6 | chr3:330256-332066 FORWARD LENGTH=433	LOC_Os04g32110.1	protein|ACT domain containing protein, expressed	IMGA|Medtr5g047260.1	ACR4 chr5 20288839-20285558 F EGN_Mt100125 20111014	GO:0008152|metabolic process GO:0019408|dolichol biosynthetic process	GO:0016597|amino acid binding	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_03435	A	A2S	Potri.001G327100	Potri.001G327100(AS) Potri.T044100(DS)	POPTR_0001s33470	sp|Q9LSD5|TCP20_ARATH	Transcription factor TCP20 OS=Arabidopsis thaliana GN=TCP20 PE=1 SV=1	AT3G27010.1	| Symbols: AT-TCP20, PCF1, TCP20, ATTCP20 | TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20 | chr3:9957810-9958754 REVERSE LENGTH=314	LOC_Os01g69980.1	protein|TCP family transcription factor, putative, expressed	IMGA|Medtr5g039600.1	TCP family transcription factor-like protein chr5 17003724-17002078 E EGN_Mt100125 20111014	GO:0008361|regulation of cell size GO:0009653|anatomical structure morphogenesis GO:1900056|negative regulation of leaf senescence	GO:0000987|core promoter proximal region sequence-specific DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_03436	B	B1S	Potri.001G327100	Potri.001G327100(BS)	POPTR_0001s33480	sp|Q9LSD5|TCP20_ARATH	Transcription factor TCP20 OS=Arabidopsis thaliana GN=TCP20 PE=1 SV=1	AT3G27010.1	| Symbols: AT-TCP20, PCF1, TCP20, ATTCP20 | TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20 | chr3:9957810-9958754 REVERSE LENGTH=314	LOC_Os01g69980.1	protein|TCP family transcription factor, putative, expressed	IMGA|Medtr5g039600.1	TCP family transcription factor-like protein chr5 17003724-17002078 E EGN_Mt100125 20111014	GO:0008361|regulation of cell size GO:0009653|anatomical structure morphogenesis GO:1900056|negative regulation of leaf senescence	GO:0000987|core promoter proximal region sequence-specific DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_03437	A	A1S	Potri.001G327300	Potri.001G327300(AS)	POPTR_0001s33490	sp|Q6R3K6|YSL6_ARATH	Probable metal-nicotianamine transporter YSL6 OS=Arabidopsis thaliana GN=YSL6 PE=2 SV=2	AT3G27020.1	| Symbols: YSL6 | YELLOW STRIPE like 6 | chr3:9961623-9964461 REVERSE LENGTH=676	LOC_Os04g32050.1	protein|transposon protein, putative, unclassified, expressed	IMGA|Medtr5g091600.1	Yellow stripe-like protein 2.8 chr5 38902087-38907789 H EGN_Mt100125 20111014	GO:0006857|oligopeptide transport GO:0055085|transmembrane transport	GO:0015198|oligopeptide transporter activity	GO:0005774|vacuolar membrane GO:0009507|chloroplast
pt2_03438	B	B1S	Potri.001G327400	Potri.001G327400(BS)	POPTR_0001s33500	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03439	A	A1S	Potri.001G327500	Potri.001G327500(AS)	POPTR_0001s33510	NA	NA	AT5G14090.1	| Symbols: | unknown protein; Has 56 Blast hits to 56 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 46; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). | chr5:4547230-4549214 FORWARD LENGTH=358	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03440	A	A1S	Potri.001G327600	Potri.001G327600(AS)	POPTR_0001s33520	NA	NA	AT5G14100.1	| Symbols: ATNAP14, NAP14 | non-intrinsic ABC protein 14 | chr5:4549706-4551632 REVERSE LENGTH=278	LOC_Os11g29850.2	protein|ABC transporter, ATP-binding protein, putative, expressed	NA	NA	NA	GO:0000166|nucleotide binding GO:0005215|transporter activity GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity	GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009941|chloroplast envelope GO:0016020|membrane
pt2_03441	A	A1S	Potri.001G327700	Potri.001G327700(AS)	POPTR_0001s33530	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process GO:0016192|vesicle-mediated transport	GO:0003674|molecular_function	GO:0016021|integral to membrane
pt2_03442	A	A1S	Potri.001G327700	Potri.001G327700(AS)	POPTR_0001s33530	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process GO:0016192|vesicle-mediated transport	GO:0003674|molecular_function	GO:0016021|integral to membrane
pt2_03443	A	A1S	Potri.001G327700	Potri.001G327700(AS)	POPTR_0001s33530	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process GO:0016192|vesicle-mediated transport	GO:0003674|molecular_function	GO:0016021|integral to membrane
pt2_03444	A	A1S	Potri.001G327800	Potri.001G327800(AS)	POPTR_0001s33550	sp|Q9LBG2|LVR_LEIAQ	Levodione reductase OS=Leifsonia aquatica GN=lvr PE=1 SV=1	AT3G01980.4	| Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr3:327747-328833 REVERSE LENGTH=266	LOC_Os03g63290.1	protein|oxidoreductase, short chain dehydrogenase/reductase family protein, putative, expressed	IMGA|Medtr1g007800.1	Alcohol dehydrogenase chr1 1138955-1134820 F EGN_Mt100125 20111014	GO:0008152|metabolic process	GO:0000166|nucleotide binding GO:0016491|oxidoreductase activity	GO:0005777|peroxisome
pt2_03445	A	A1S	Potri.001G328000	Potri.001G328000(AS)	POPTR_0001s33560	sp|Q9FYA2|WRK75_ARATH	Probable WRKY transcription factor 75 OS=Arabidopsis thaliana GN=WRKY75 PE=2 SV=1	AT5G13080.1	| Symbols: WRKY75, ATWRKY75 | WRKY DNA-binding protein 75 | chr5:4149928-4151019 REVERSE LENGTH=145	LOC_Os11g29870.1	protein|WRKY72, expressed	IMGA|Medtr1g086790.1	WRKY transcription factor chr1 23203731-23201879 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009723|response to ethylene stimulus GO:0016036|cellular response to phosphate starvation GO:0019375|galactolipid biosynthetic process GO:0032107|regulation of response to nutrient levels GO:0042631|cellular response to water deprivation GO:0043620|regulation of DNA-dependent transcription in response to stress GO:0048527|lateral root development	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_03446	A	A1S	Potri.001G328100	Potri.001G328100(AS)	POPTR_0001s33570	NA	NA	AT5G14105.1	| Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:4552169-4552901 REVERSE LENGTH=76	LOC_Os05g44160.1	protein|expressed protein	IMGA|contig_71135_1.1	Unknown protein contig_71135 3608-13 F PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005747|mitochondrial respiratory chain complex I
pt2_03447	A	A1S	Potri.001G328200	Potri.001G328200(AS)	POPTR_0001s33580	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03448	A	A1S	Potri.001G328300	Potri.001G328300(AS)	POPTR_0001s33590	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_03449	C	C1S	Potri.001G328400	Potri.001G328400(CS)	sp|Q9FVC1|SVP_ARATH	MADS-box protein SVP OS=Arabidopsis thaliana GN=SVP PE=1 SV=1	AT2G22540.1	| Symbols: SVP, AGL22 | K-box region and MADS-box transcription factor family protein | chr2:9580417-9583603 FORWARD LENGTH=240	LOC_Os03g03100.1	protein|OsMADS50 - MADS-box family gene with MIKCc type-box, expressed	IMGA|Medtr5g046870.1	MADS box transcription factor chr5 20128181-20124932 H EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0006355|regulation of transcription, DNA-dependent GO:0006612|protein targeting to membrane GO:0006944|cellular membrane fusion GO:0009266|response to temperature stimulus GO:0009556|microsporogenesis GO:0009617|response to bacterium GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009910|negative regulation of flower development GO:0009965|leaf morphogenesis GO:0010076|maintenance of floral meristem identity GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0010582|floral meristem determinacy GO:0030154|cell differentiation GO:0031348|negative regulation of defense response GO:0035304|regulation of protein dephosphorylation GO:0045892|negative regulation of transcription, DNA-dependent GO:0045893|positive regulation of transcription, DNA-dependent GO:0048438|floral whorl development GO:0048481|ovule development GO:0052543|callose deposition in cell wall	GO:0000900|translation repressor activity, nucleic acid binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_03450	C	C1A	Potri.001G328600	Potri.001G328600(CA)	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0009911|positive regulation of flower development GO:0010077|maintenance of inflorescence meristem identity GO:0010154|fruit development GO:0031540|regulation of anthocyanin biosynthetic process GO:0048481|ovule development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_03451	A	A1S	Potri.001G328700	Potri.001G328700(AS)	POPTR_0001s33620	NA	NA	AT3G27027.1	| Symbols: | Protein of unknown function (DUF 3339) | chr3:9971921-9972130 FORWARD LENGTH=69	LOC_Os01g69890.1	protein|expressed protein	IMGA|contig_84074_1.1	Unknown protein contig_84074 595-1844 E PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_03452	A	A1S	Potri.001G328800	Potri.001G328800(AS)	POPTR_0001s33630	NA	NA	AT3G27030.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3339 (InterPro:IPR021775); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF 3339) (TAIR:AT5G40970.1); Has 538 Blast hits to 271 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 534; Viruses - 4; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:9972508-9974225 REVERSE LENGTH=142	LOC_Os02g30600.1	protein|expressed protein	IMGA|contig_84074_1.1	Unknown protein contig_84074 595-1844 E PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_03453	A	A1S	Potri.001G328900	Potri.001G328900(AS)	POPTR_0001s33640	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0031225|anchored to membrane
pt2_03454	C	C1S	Potri.001G329000	Potri.001G329000(CS)	NA	NA	AT5G08391.1	| Symbols: | Protein of unknown function (DUF 3339) | chr5:2699357-2699566 FORWARD LENGTH=69	LOC_Os11g30360.1	protein|expressed protein	IMGA|contig_84074_1.1	Unknown protein contig_84074 595-1844 E PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_03455	A	A1S	Potri.001G329000	Potri.001G329000(AS)	POPTR_0001s33660	NA	NA	AT5G08391.1	| Symbols: | Protein of unknown function (DUF 3339) | chr5:2699357-2699566 FORWARD LENGTH=69	LOC_Os11g30360.1	protein|expressed protein	IMGA|contig_84074_1.1	Unknown protein contig_84074 595-1844 E PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_03456	A	A1S	Potri.001G329100	Potri.001G329100(AS)	POPTR_0001s33670	NA	NA	AT3G01930.2	| Symbols: | Major facilitator superfamily protein | chr3:319289-321488 REVERSE LENGTH=584	LOC_Os08g42010.1	protein|nodulin, putative, expressed	IMGA|Medtr5g090570.1	Nodulin-related protein chr5 38409849-38407023 H EGN_Mt100125 20111014	NA	NA	GO:0005886|plasma membrane
pt2_03457	A	A2S	Potri.001G329200	Potri.001G329200(AS) Potri.017G064100(DS)	POPTR_0001s33680	sp|Q9SZE7|PER51_ARATH	Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=2 SV=1	AT4G37530.1	| Symbols: | Peroxidase superfamily protein | chr4:17634786-17636082 FORWARD LENGTH=329	LOC_Os08g42030.1	protein|peroxidase precursor, putative, expressed	IMGA|Medtr5g016010.1	Peroxidase chr5 5397722-5395410 E EGN_Mt100125 20111014	GO:0006979|response to oxidative stress GO:0009651|response to salt stress GO:0055114|oxidation-reduction process	GO:0004601|peroxidase activity GO:0005515|protein binding GO:0020037|heme binding	GO:0005576|extracellular region
pt2_03458	A	A1S	Potri.001G329300	Potri.001G329300(AS)	POPTR_0001s33690	sp|Q7ZZ00|ZN511_DANRE	Zinc finger protein 511 OS=Danio rerio GN=znf511 PE=2 SV=1	AT5G14140.1	| Symbols: | zinc ion binding;nucleic acid binding;zinc ion binding | chr5:4561539-4563513 FORWARD LENGTH=264	LOC_Os11g30484.1	protein|ZOS11-03 - C2H2 zinc finger protein, expressed	IMGA|contig_68159_1.1	Zinc finger protein contig_68159 854-132 H PREDN 20111014	GO:0008150|biological_process	GO:0003676|nucleic acid binding GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_03459	A	A1S	Potri.001G329400	Potri.001G329400(AS)	POPTR_0001s33700	sp|P38385|SC61G_ORYSJ	Protein transport protein Sec61 subunit gamma OS=Oryza sativa subsp. japonica GN=Os02g0178400 PE=3 SV=1	AT5G50460.1	| Symbols: | secE/sec61-gamma protein transport protein | chr5:20552168-20552509 REVERSE LENGTH=69	LOC_Os06g44374.1	protein|protein transport protein SEC61 subunit gamma, putative, expressed	IMGA|Medtr5g084060.1	Protein transport protein SEC61 gamma subunit chr5 35269206-35267322 F EGN_Mt100125 20111014	GO:0006457|protein folding GO:0006605|protein targeting GO:0006886|intracellular protein transport GO:0009408|response to heat GO:0009627|systemic acquired resistance GO:0009644|response to high light intensity GO:0015031|protein transport GO:0034976|response to endoplasmic reticulum stress GO:0042542|response to hydrogen peroxide	GO:0015450|P-P-bond-hydrolysis-driven protein transmembrane transporter activity	GO:0016020|membrane
pt2_03460	A	A1S	Potri.001G329500	Potri.001G329500(AS)	POPTR_0001s33710	sp|Q9FLN4|RK27_ARATH	50S ribosomal protein L27, chloroplastic OS=Arabidopsis thaliana GN=RPL27 PE=2 SV=1	AT5G40950.1	| Symbols: RPL27 | ribosomal protein large subunit 27 | chr5:16410866-16411845 FORWARD LENGTH=198	LOC_Os01g69950.1	protein|ribosomal protein L27, putative, expressed	NA	NA	GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005840|ribosome GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009579|thylakoid GO:0009941|chloroplast envelope
pt2_03461	A	A1S	Potri.001G329600	Potri.001G329600(AS)	POPTR_0001s33720	NA	NA	AT3G27050.1	| Symbols: | unknown protein; Has 43 Blast hits to 43 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). | chr3:9978286-9979636 REVERSE LENGTH=182	LOC_Os11g29700.2	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_03462	A	A1S	Potri.001G329700	Potri.001G329700(AS)	POPTR_0001s33730	sp|P49730|RIR2_TOBAC	Ribonucleoside-diphosphate reductase small chain OS=Nicotiana tabacum PE=2 SV=1	AT3G27060.1	| Symbols: TSO2, ATTSO2 | Ferritin/ribonucleotide reductase-like family protein | chr3:9979971-9981057 REVERSE LENGTH=332	LOC_Os06g03720.1	protein|ribonucleoside-diphosphate reductase small chain, putative, expressed	NA	NA	GO:0006260|DNA replication GO:0006261|DNA-dependent DNA replication GO:0006281|DNA repair GO:0007275|multicellular organismal development GO:0009165|nucleotide biosynthetic process GO:0009186|deoxyribonucleoside diphosphate metabolic process GO:0012501|programmed cell death GO:0051726|regulation of cell cycle GO:0055114|oxidation-reduction process	GO:0004748|ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor GO:0016491|oxidoreductase activity GO:0046914|transition metal ion binding	GO:0005737|cytoplasm
pt2_03463	A	A1S	Potri.001G329800	Potri.001G329800(AS)	POPTR_0001s33740	NA	NA	NA	NA	NA	NA	IMGA|Medtr1g115090.1	MADS-box transcription factor chr1 33315348-33313950 I EGN_Mt100125 20111014	NA	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_03464	A	A2S	Potri.001G329900	Potri.001G329900(AS) Potri.001G330000(AA)	POPTR_0001s33750	sp|Q8GYN9|MENB_ARATH	1,4-Dihydroxy-2-naphthoyl-CoA synthase, peroxisomal OS=Arabidopsis thaliana GN=MENB PE=1 SV=2	AT1G60550.1	| Symbols: ECHID, DHNS | enoyl-CoA hydratase/isomerase D | chr1:22305988-22308092 REVERSE LENGTH=337	LOC_Os01g47350.1	protein|enoyl-CoA hydratase/isomerase family protein, putative, expressed	IMGA|contig_162843_1.1	Naphthoate synthase contig_162843 2403-173 E PREDN 20111014	GO:0008152|metabolic process GO:0009234|menaquinone biosynthetic process GO:0042371|vitamin K biosynthetic process	GO:0003824|catalytic activity GO:0008935|1,4-dihydroxy-2-naphthoyl-CoA synthase activity	GO:0005739|mitochondrion GO:0005777|peroxisome
pt2_03465	A	A1S	Potri.001G330000	Potri.001G330000(AS)	POPTR_0001s33760	NA	NA	AT3G48200.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 210 Blast hits to 148 proteins in 42 species: Archae - 0; Bacteria - 118; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). | chr3:17832949-17837371 REVERSE LENGTH=1088	LOC_Os05g51620.1	protein|expressed protein	NA	NA	GO:0000023|maltose metabolic process GO:0006098|pentose-phosphate shunt GO:0008150|biological_process GO:0009902|chloroplast relocation GO:0010103|stomatal complex morphogenesis GO:0016556|mRNA modification GO:0019252|starch biosynthetic process GO:0043085|positive regulation of catalytic activity	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_03466	A	A1S	Potri.001G330100	Potri.001G330100(AS)	POPTR_0001s33770	sp|P0AFR6|YCIO_SHIFL	Uncharacterized protein yciO OS=Shigella flexneri GN=yciO PE=3 SV=1	AT3G01920.1	| Symbols: | DHBP synthase RibB-like alpha/beta domain | chr3:317449-319001 FORWARD LENGTH=307	LOC_Os08g41910.1	protein|Sua5/YciO/YrdC/YwlC family protein, putative, expressed	NA	NA	GO:0008150|biological_process	NA	GO:0005737|cytoplasm
pt2_03467	A	A1S	Potri.001G330100	Potri.001G330100(AS)	POPTR_0001s33770	sp|P0AFR6|YCIO_SHIFL	Uncharacterized protein yciO OS=Shigella flexneri GN=yciO PE=3 SV=1	AT3G01920.1	| Symbols: | DHBP synthase RibB-like alpha/beta domain | chr3:317449-319001 FORWARD LENGTH=307	LOC_Os08g41910.1	protein|Sua5/YciO/YrdC/YwlC family protein, putative, expressed	NA	NA	GO:0008150|biological_process	NA	GO:0005737|cytoplasm
pt2_03468	A	A1S	Potri.001G330100	Potri.001G330100(AS)	POPTR_0001s33770	sp|P0AFR6|YCIO_SHIFL	Uncharacterized protein yciO OS=Shigella flexneri GN=yciO PE=3 SV=1	AT3G01920.1	| Symbols: | DHBP synthase RibB-like alpha/beta domain | chr3:317449-319001 FORWARD LENGTH=307	LOC_Os08g41910.1	protein|Sua5/YciO/YrdC/YwlC family protein, putative, expressed	NA	NA	GO:0008150|biological_process	NA	GO:0005737|cytoplasm
pt2_03469	A	A1S	Potri.001G330200	Potri.001G330200(AS)	POPTR_0001s33780	sp|P92792|TOM20_SOLTU	Mitochondrial import receptor subunit TOM20 OS=Solanum tuberosum GN=TOM20 PE=1 SV=1	AT1G27390.1	| Symbols: TOM20-2 | translocase outer membrane 20-2 | chr1:9513469-9514912 REVERSE LENGTH=210	LOC_Os01g69250.1	protein|mitochondrial import receptor subunit TOM20, putative, expressed	NA	NA	GO:0006626|protein targeting to mitochondrion GO:0045040|protein import into mitochondrial outer membrane	GO:0015450|P-P-bond-hydrolysis-driven protein transmembrane transporter activity GO:0046872|metal ion binding	GO:0005739|mitochondrion GO:0005741|mitochondrial outer membrane GO:0005742|mitochondrial outer membrane translocase complex GO:0005743|mitochondrial inner membrane GO:0005744|mitochondrial inner membrane presequence translocase complex GO:0022626|cytosolic ribosome
pt2_03470	A	A1S	Potri.001G330300	Potri.001G330300(AS)	POPTR_0001s33790	sp|P37707|B2_DAUCA	B2 protein OS=Daucus carota PE=2 SV=1	AT3G27090.1	| Symbols: | DCD (Development and Cell Death) domain protein | chr3:9990020-9991407 FORWARD LENGTH=296	LOC_Os05g41930.1	protein|N-rich protein, putative, expressed	IMGA|contig_74333_1.1	Gda-1 contig_74333 1591-4533 F PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_03471	A	A3S	Potri.001G330400	Potri.001G330400(AS) Potri.T061800(BS) Potri.017G069200(DS)	POPTR_0001s33800	sp|B5FZ63|ENY2_TAEGU	Enhancer of yellow 2 transcription factor homolog OS=Taeniopygia guttata GN=ENY2 PE=3 SV=1	AT3G27100.1	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, enhancer of yellow 2 (InterPro:IPR018783); Has 288 Blast hits to 288 proteins in 94 species: Archae - 0; Bacteria - 0; Metazoa - 197; Fungi - 20; Plants - 51; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). | chr3:9994743-9995923 REVERSE LENGTH=115	LOC_Os01g69110.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0009941|chloroplast envelope
pt2_03472	A	A1S	Potri.001G330400	Potri.001G330400(AS)	POPTR_0001s33800	sp|B5FZ63|ENY2_TAEGU	Enhancer of yellow 2 transcription factor homolog OS=Taeniopygia guttata GN=ENY2 PE=3 SV=1	AT3G27100.1	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, enhancer of yellow 2 (InterPro:IPR018783); Has 288 Blast hits to 288 proteins in 94 species: Archae - 0; Bacteria - 0; Metazoa - 197; Fungi - 20; Plants - 51; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). | chr3:9994743-9995923 REVERSE LENGTH=115	LOC_Os01g69110.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0009941|chloroplast envelope
pt2_03473	A	A1S	Potri.001G330400	Potri.001G330400(AS)	POPTR_0001s33800	sp|B5FZ63|ENY2_TAEGU	Enhancer of yellow 2 transcription factor homolog OS=Taeniopygia guttata GN=ENY2 PE=3 SV=1	AT3G27100.1	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, enhancer of yellow 2 (InterPro:IPR018783); Has 288 Blast hits to 288 proteins in 94 species: Archae - 0; Bacteria - 0; Metazoa - 197; Fungi - 20; Plants - 51; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). | chr3:9994743-9995923 REVERSE LENGTH=115	LOC_Os01g69110.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0009941|chloroplast envelope
pt2_03474	B	B2S	Potri.001G330500	Potri.001G330500(BS) Potri.008G099100(DS)	POPTR_0001s33810	sp|Q42602|C89A2_ARATH	Cytochrome P450 89A2 OS=Arabidopsis thaliana GN=CYP89A2 PE=2 SV=2	AT1G64940.1	| Symbols: CYP89A6 | cytochrome P450, family 87, subfamily A, polypeptide 6 | chr1:24123789-24125324 FORWARD LENGTH=511	LOC_Os06g22340.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g034900.1	Cytochrome P450 chr5 14751619-14750063 H EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	NA
pt2_03475	A	A1S	Potri.001G330600	Potri.001G330600(AS)	POPTR_0001s33820	sp|P31414|AVP1_ARATH	Pyrophosphate-energized vacuolar membrane proton pump 1 OS=Arabidopsis thaliana GN=AVP1 PE=1 SV=1	AT1G15690.2	| Symbols: AVP1, ATAVP3, AVP-3, AtVHP1;1 | Inorganic H pyrophosphatase family protein | chr1:5399115-5402185 FORWARD LENGTH=642	LOC_Os02g09150.2	protein|inorganic H+ pyrophosphatase, putative, expressed	NA	NA	GO:0009414|response to water deprivation GO:0009651|response to salt stress GO:0009926|auxin polar transport GO:0010248|establishment or maintenance of transmembrane electrochemical gradient GO:0015992|proton transport GO:0048366|leaf development	GO:0004427|inorganic diphosphatase activity GO:0009678|hydrogen-translocating pyrophosphatase activity	GO:0000325|plant-type vacuole GO:0005739|mitochondrion GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009705|plant-type vacuole membrane GO:0009941|chloroplast envelope GO:0010008|endosome membrane GO:0016020|membrane
pt2_03476	R	R	NA	NA	POPTR_0001s33830	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03477	A	A1S	Potri.001G330800	Potri.001G330800(AS)	POPTR_0001s33840	NA	NA	AT3G27110.2	| Symbols: | Peptidase family M48 family protein | chr3:9998006-9999892 FORWARD LENGTH=344	LOC_Os01g73910.5	protein|peptidase, putative, expressed	NA	NA	GO:0006508|proteolysis	GO:0004222|metalloendopeptidase activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_03478	A	A1S	Potri.001G330900	Potri.001G330900(AS)	POPTR_0001s33850	sp|Q9S850|SUOX_ARATH	Sulfite oxidase OS=Arabidopsis thaliana GN=SOX PE=1 SV=1	AT3G01910.1	| Symbols: SOX, AT-SO, AtSO | sulfite oxidase | chr3:314919-317274 REVERSE LENGTH=393	LOC_Os08g41830.1	protein|sulfite oxidase, putative, expressed	IMGA|Medtr5g059820.1	Nitrate reductase chr5 24115824-24110118 F EGN_Mt100125 20111014	GO:0006790|sulfur compound metabolic process GO:0010477|response to sulfur dioxide GO:0015994|chlorophyll metabolic process GO:0055114|oxidation-reduction process	GO:0008482|sulfite oxidase activity GO:0009055|electron carrier activity GO:0016491|oxidoreductase activity GO:0030151|molybdenum ion binding GO:0046872|metal ion binding	GO:0005739|mitochondrion GO:0005777|peroxisome GO:0009507|chloroplast
pt2_03479	A	A1S	Potri.001G331100	Potri.001G331100(AS)	POPTR_0001s33860	sp|O81117|C94A1_VICSA	Cytochrome P450 94A1 OS=Vicia sativa GN=CYP94A1 PE=2 SV=2	AT3G01900.1	| Symbols: CYP94B2 | cytochrome P450, family 94, subfamily B, polypeptide 2 | chr3:312359-313849 REVERSE LENGTH=496	LOC_Os11g29290.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g070010.1	Cytochrome P450 chr5 28679240-28682095 F EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005576|extracellular region
pt2_03480	A	A1S	Potri.001G331200	Potri.001G331200(AS)	POPTR_0001s33870	sp|Q6PIW4|FIGL1_HUMAN	Fidgetin-like protein 1 OS=Homo sapiens GN=FIGNL1 PE=1 SV=2	AT3G27120.1	| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr3:10000248-10003265 REVERSE LENGTH=476	LOC_Os06g03940.1	protein|spastin, putative, expressed	IMGA|contig_66600_1.1	Katanin p60 ATPase-containing subunit contig_66600 4388-507 H PREDN 20111014	NA	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_03481	A	A1S	Potri.001G331300	Potri.001G331300(AS)	POPTR_0001s33880	sp|Q6DDU8|FIGL1_XENLA	Fidgetin-like protein 1 OS=Xenopus laevis GN=fignl1 PE=2 SV=1	AT3G27120.1	| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr3:10000248-10003265 REVERSE LENGTH=476	LOC_Os06g03940.1	protein|spastin, putative, expressed	IMGA|contig_66600_1.1	Katanin p60 ATPase-containing subunit contig_66600 4388-507 H PREDN 20111014	NA	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_03482	A	A1S	Potri.001G331400	Potri.001G331400(AS)	POPTR_0001s33890	sp|Q9FMT4|SNF12_ARATH	SWI/SNF complex component SNF12 homolog OS=Arabidopsis thaliana GN=At5g14170 PE=1 SV=1	AT5G14170.1	| Symbols: CHC1 | SWIB/MDM2 domain superfamily protein | chr5:4568696-4570444 REVERSE LENGTH=534	LOC_Os04g31320.1	protein|SWIB/MDM2 domain containing protein, expressed	NA	NA	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0006281|DNA repair GO:0008284|positive regulation of cell proliferation GO:0010224|response to UV-B GO:0048364|root development	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_03483	A	A1S	Potri.001G331500	Potri.001G331500(AS)	POPTR_0001s33900	sp|Q9LI89|FBK70_ARATH	F-box/kelch-repeat protein At3g27150 OS=Arabidopsis thaliana GN=At3g27150 PE=2 SV=1	AT3G27150.1	| Symbols: | Galactose oxidase/kelch repeat superfamily protein | chr3:10009692-10010960 REVERSE LENGTH=422	LOC_Os04g52830.1	protein|OsFBK15 - F-box domain and kelch repeat containing protein, expressed	IMGA|contig_62007_1.1	Kelch-like protein contig_62007 3463-628 E PREDN 20111014	GO:0000041|transition metal ion transport GO:0006826|iron ion transport GO:0008150|biological_process GO:0009691|cytokinin biosynthetic process GO:0010106|cellular response to iron ion starvation GO:0010167|response to nitrate GO:0015706|nitrate transport	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_03484	A	A1S	Potri.001G331600	Potri.001G331600(AS)	POPTR_0001s33910	NA	NA	AT3G27160.1	| Symbols: GHS1 | Ribosomal protein S21 family protein | chr3:10017531-10018854 FORWARD LENGTH=183	LOC_Os02g09590.1	protein|ribosome, putative, expressed	IMGA|contig_53851_1.1	30S ribosomal protein S21 contig_53851 67-2522 F PREDN 20111014	GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005840|ribosome GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009570|chloroplast stroma
pt2_03485	A	A1S	Potri.001G331700	Potri.001G331700(AS)	POPTR_0001s33920	sp|P92942|CLCB_ARATH	Chloride channel protein CLC-b OS=Arabidopsis thaliana GN=CLC-B PE=1 SV=1	AT3G27170.1	| Symbols: CLC-B, ATCLC-B | chloride channel B | chr3:10024147-10026921 FORWARD LENGTH=780	LOC_Os12g25200.1	protein|chloride transporter, chloride channel family, putative, expressed	IMGA|Medtr5g005990.2	Chloride channel protein CLC-d chr5 468933-479871 F EGN_Mt100125 20111014	GO:0006821|chloride transport GO:0055085|transmembrane transport	GO:0005216|ion channel activity GO:0005247|voltage-gated chloride channel activity GO:0005253|anion channel activity GO:0009671|nitrate:hydrogen symporter activity	GO:0005622|intracellular GO:0005634|nucleus GO:0009705|plant-type vacuole membrane GO:0016020|membrane
pt2_03486	A	A1S	Potri.001G331800	Potri.001G331800(AS)	POPTR_0001s33930	sp|Q9XGM1|VATD_ARATH	V-type proton ATPase subunit D OS=Arabidopsis thaliana GN=VHA-D PE=1 SV=2	AT3G58730.1	| Symbols: | vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD) | chr3:21718495-21719280 REVERSE LENGTH=261	LOC_Os04g55040.2	protein|vacuolar ATP synthase subunit D 1, putative, expressed	NA	NA	GO:0006007|glucose catabolic process GO:0006623|protein targeting to vacuole GO:0006816|calcium ion transport GO:0007030|Golgi organization GO:0007033|vacuole organization GO:0009651|response to salt stress GO:0015991|ATP hydrolysis coupled proton transport	GO:0042626|ATPase activity, coupled to transmembrane movement of substances GO:0046961|proton-transporting ATPase activity, rotational mechanism	GO:0000325|plant-type vacuole GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0016020|membrane
pt2_03487	A	A1S	Potri.001G331900	Potri.001G331900(AS)	POPTR_0001s33940	sp|Q6M9M7|Y1998_PARUW	Uncharacterized RNA methyltransferase pc1998 OS=Protochlamydia amoebophila (strain UWE25) GN=pc1998 PE=3 SV=1	AT3G27180.1	| Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr3:10027163-10030062 REVERSE LENGTH=518	LOC_Os01g69120.1	protein|uncharacterized RNA methyltransferase pc1998, putative, expressed	NA	NA	GO:0031167|rRNA methylation	GO:0008168|methyltransferase activity	NA
pt2_03488	A	A2S	Potri.001G332100	Potri.001G332100(AS) Potri.017G069600(DS)	POPTR_0001s33950	sp|Q9FKS0|UKL1_ARATH	Uridine kinase-like protein 1, chloroplastic OS=Arabidopsis thaliana GN=UKL1 PE=1 SV=1	AT5G40870.1	| Symbols: ATUK/UPRT1, UKL1, UK/UPRT1 | uridine kinase/uracil phosphoribosyltransferase 1 | chr5:16375021-16378384 FORWARD LENGTH=486	LOC_Os09g32820.1	protein|uridine/cytidine kinase-like 1, putative, expressed	IMGA|Medtr5g096660.1	Uridine-cytidine kinase A chr5 41233463-41240199 E EGN_Mt100125 20111014	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0006094|gluconeogenesis GO:0007010|cytoskeleton organization GO:0009058|biosynthetic process GO:0009086|methionine biosynthetic process GO:0009616|virus induced gene silencing GO:0010050|vegetative phase change GO:0010498|proteasomal protein catabolic process GO:0016310|phosphorylation GO:0044206|UMP salvage GO:2000904|regulation of starch metabolic process	GO:0004845|uracil phosphoribosyltransferase activity GO:0004849|uridine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity	GO:0005737|cytoplasm GO:0005829|cytosol GO:0009507|chloroplast
pt2_03489	A	A1S	Potri.001G332200	Potri.001G332200(AS)	POPTR_0001s33960	sp|Q41001|BCP_PEA	Blue copper protein OS=Pisum sativum PE=2 SV=1	AT3G27200.1	| Symbols: | Cupredoxin superfamily protein | chr3:10043738-10044340 REVERSE LENGTH=174	LOC_Os04g46130.1	protein|plastocyanin-like domain containing protein, putative, expressed	IMGA|Medtr5g006040.1	Early nodulin-like protein chr5 502223-501280 F EGN_Mt100125 20111014	GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process	GO:0005507|copper ion binding GO:0009055|electron carrier activity	GO:0005886|plasma membrane GO:0031225|anchored to membrane
pt2_03490	A	A1S	Potri.001G332300	Potri.001G332300(AS)	POPTR_0001s33970	sp|Q67ZU1|LIP2_ARATH	Triacylglycerol lipase 2 OS=Arabidopsis thaliana GN=LIP2 PE=2 SV=1	AT5G14180.1	| Symbols: MPL1 | Myzus persicae-induced lipase 1 | chr5:4571442-4574413 REVERSE LENGTH=418	LOC_Os08g41780.1	protein|triacylglycerol lipase precursor, putative, expressed	IMGA|Medtr5g084950.1	Triacylglycerol lipase chr5 35635252-35632018 E EGN_Mt100125 20111014	GO:0002213|defense response to insect GO:0006629|lipid metabolic process GO:0006635|fatty acid beta-oxidation GO:0009062|fatty acid catabolic process	GO:0003824|catalytic activity GO:0016298|lipase activity	GO:0005576|extracellular region
pt2_03491	C	C1S	Potri.001G332500	Potri.001G332500(CS)	sp|Q9LK32|Y3721_ARATH	Uncharacterized protein At3g27210 OS=Arabidopsis thaliana GN=Y-2 PE=1 SV=1	AT3G01860.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 64 Blast hits to 64 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:303767-304329 FORWARD LENGTH=159	LOC_Os01g69100.1	protein|expressed protein	NA	NA	GO:0006612|protein targeting to membrane GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010363|regulation of plant-type hypersensitive response GO:0046686|response to cadmium ion	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_03492	R	R	NA	NA	POPTR_0001s33990	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03493	A	A1S	Potri.001G332500	Potri.001G332500(AS)	POPTR_0001s33990	sp|Q9LK32|Y3721_ARATH	Uncharacterized protein At3g27210 OS=Arabidopsis thaliana GN=Y-2 PE=1 SV=1	AT3G01860.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 64 Blast hits to 64 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:303767-304329 FORWARD LENGTH=159	LOC_Os01g69100.1	protein|expressed protein	NA	NA	GO:0006612|protein targeting to membrane GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010363|regulation of plant-type hypersensitive response GO:0046686|response to cadmium ion	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_03494	C	C1S	Potri.001G332600	Potri.001G332600(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03495	A	A2S	Potri.T115200	Potri.T115200(AS) Potri.001G332700(AS)	POPTR_0001s34010	sp|Q9SE42|RPE1_ORYSJ	Ribulose-phosphate 3-epimerase, cytoplasmic isoform OS=Oryza sativa subsp. japonica GN=Os09g0505700 PE=1 SV=1	AT3G01850.2	| Symbols: | Aldolase-type TIM barrel family protein | chr3:300428-301987 REVERSE LENGTH=225	LOC_Os09g32810.2	protein|ribulose-phosphate 3-epimerase, putative, expressed	NA	NA	GO:0005975|carbohydrate metabolic process GO:0008152|metabolic process	GO:0003824|catalytic activity GO:0004750|ribulose-phosphate 3-epimerase activity	GO:0005737|cytoplasm
pt2_03496	A	A2S	Potri.001G332800	Potri.001G332800(AS) Potri.T115100(AS)	POPTR_0001s34020	sp|Q8VYY5|NCRK_ARATH	Receptor-like serine/threonine-protein kinase NCRK OS=Arabidopsis thaliana GN=NCRK PE=1 SV=1	AT3G01840.1	| Symbols: | Protein kinase superfamily protein | chr3:296582-298634 REVERSE LENGTH=654	LOC_Os08g42580.4	protein|protein kinase domain containing protein, expressed	IMGA|Medtr5g042440.1	Cysteine-rich receptor-like protein kinase chr5 18240455-18244017 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0009507|chloroplast
pt2_03497	A	A2A	Potri.T115000	Potri.T115000(AA) Potri.001G332900(AA)	POPTR_0001s34030	sp|Q9SRE6|CML38_ARATH	Calcium-binding protein CML38 OS=Arabidopsis thaliana GN=CML38 PE=2 SV=1	AT1G76650.3	| Symbols: CML38 | calmodulin-like 38 | chr1:28766909-28767442 REVERSE LENGTH=177	LOC_Os01g72550.1	protein|OsCML19 - Calmodulin-related calcium sensor protein, expressed	IMGA|Medtr5g079340.1	Polcalcin Nic t chr5 32914810-32913864 F EGN_Mt100125 20111014	GO:0009611|response to wounding GO:0009620|response to fungus GO:0009695|jasmonic acid biosynthetic process GO:0009723|response to ethylene stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009753|response to jasmonic acid stimulus GO:0009873|ethylene mediated signaling pathway GO:0010200|response to chitin GO:0035556|intracellular signal transduction	GO:0005509|calcium ion binding	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_03498	A	A3S	Potri.T114900	Potri.T114900(AS) Potri.T114800(BS) Potri.T114600(DS)	POPTR_0001s34040	sp|Q9SD53|Y3720_ARATH	UPF0481 protein At3g47200 OS=Arabidopsis thaliana GN=At3g47200 PE=1 SV=1	AT3G50160.1	| Symbols: | Plant protein of unknown function (DUF247) | chr3:18598826-18600903 REVERSE LENGTH=503	LOC_Os04g42650.1	protein|plant protein of unknown function domain containing protein, expressed	IMGA|Medtr5g016570.1	hypothetical protein chr5 5698968-5697224 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005886|plasma membrane
pt2_03499	A	A4S	Potri.T114800	Potri.T114800(AS) Potri.T114600(BS) Potri.T114900(BS) Potri.001G333000(BS)	POPTR_0001s34050	sp|Q9SD53|Y3720_ARATH	UPF0481 protein At3g47200 OS=Arabidopsis thaliana GN=At3g47200 PE=1 SV=1	AT3G50160.1	| Symbols: | Plant protein of unknown function (DUF247) | chr3:18598826-18600903 REVERSE LENGTH=503	LOC_Os04g42650.1	protein|plant protein of unknown function domain containing protein, expressed	IMGA|Medtr5g016570.1	hypothetical protein chr5 5698968-5697224 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005886|plasma membrane
pt2_03500	A	A4S	Potri.T114600	Potri.T114600(AS) Potri.T114900(DS) Potri.T114800(DS) Potri.001G333000(DS)	POPTR_0001s34060	sp|Q9SD53|Y3720_ARATH	UPF0481 protein At3g47200 OS=Arabidopsis thaliana GN=At3g47200 PE=1 SV=1	AT3G50160.1	| Symbols: | Plant protein of unknown function (DUF247) | chr3:18598826-18600903 REVERSE LENGTH=503	LOC_Os04g42650.1	protein|plant protein of unknown function domain containing protein, expressed	IMGA|Medtr5g016570.1	hypothetical protein chr5 5698968-5697224 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005886|plasma membrane
pt2_03501	A	A2S	Potri.001G333100	Potri.001G333100(AS) Potri.T114500(AS)	POPTR_0001s34070	sp|Q8HSW1|KADC_SOLTU	Adenylate kinase, chloroplastic OS=Solanum tuberosum GN=ADK PE=2 SV=1	AT3G01820.1	| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr3:293981-295357 REVERSE LENGTH=263	LOC_Os08g02540.1	protein|adenylate kinase, putative, expressed	NA	NA	GO:0006139|nucleobase-containing compound metabolic process GO:0006354|DNA-dependent transcription, elongation GO:0009061|anaerobic respiration GO:0009117|nucleotide metabolic process	GO:0005524|ATP binding GO:0019201|nucleotide kinase activity GO:0019205|nucleobase-containing compound kinase activity	GO:0005739|mitochondrion
pt2_03502	A	A1S	Potri.001G333200	Potri.001G333200(AS)	POPTR_0001s34080	NA	NA	AT3G01810.3	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: nucleolar protein gar2-related (TAIR:AT2G42320.2). | chr3:289218-292557 FORWARD LENGTH=921	LOC_Os09g31230.2	protein|expressed protein	NA	NA	GO:0000272|polysaccharide catabolic process GO:0005982|starch metabolic process GO:0008150|biological_process GO:0009664|plant-type cell wall organization GO:0010075|regulation of meristem growth	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_03503	A	A1S	Potri.001G333300	Potri.001G333300(AS)	POPTR_0001s34090	sp|Q8LFN2|Y3037_ARATH	Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 OS=Arabidopsis thaliana GN=At3g03770 PE=2 SV=1	AT5G14210.1	| Symbols: | Leucine-rich repeat protein kinase family protein | chr5:4578503-4581374 REVERSE LENGTH=775	LOC_Os11g20360.2	protein|expressed protein	IMGA|Medtr5g038600.1	LRR receptor-like serine/threonine-protein kinase EFR chr5 16538056-16535057 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005739|mitochondrion GO:0005886|plasma membrane
pt2_03504	A	A1S	Potri.001G333400	Potri.001G333400(AS)	POPTR_0001s34100	sp|Q60928|GGT1_MOUSE	Gamma-glutamyltranspeptidase 1 OS=Mus musculus GN=Ggt1 PE=1 SV=1	AT4G39640.2	| Symbols: GGT1 | gamma-glutamyl transpeptidase 1 | chr4:18400608-18402861 FORWARD LENGTH=572	LOC_Os04g38450.1	protein|gamma-glutamyltranspeptidase 1 precursor, putative, expressed	IMGA|Medtr5g084180.1	Gamma-glutamyl transpeptidase chr5 35330918-35330066 H EGN_Mt100125 20111014	GO:0006751|glutathione catabolic process GO:0006979|response to oxidative stress GO:0009611|response to wounding GO:0009625|response to insect GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0031348|negative regulation of defense response	GO:0003840|gamma-glutamyltransferase activity GO:0016756|glutathione gamma-glutamylcysteinyltransferase activity	GO:0005576|extracellular region GO:0009505|plant-type cell wall GO:0009506|plasmodesma GO:0048046|apoplast
pt2_03505	A	A1S	Potri.001G333500	Potri.001G333500(AS)	POPTR_0001s34110	sp|Q94IG7|PPOCM_SPIOL	Protoporphyrinogen oxidase, chloroplastic/mitochondrial OS=Spinacia oleracea GN=POX2 PE=1 SV=1	AT5G14220.1	| Symbols: HEMG2, MEE61, PPO2 | Flavin containing amine oxidoreductase family | chr5:4583506-4587369 REVERSE LENGTH=508	LOC_Os04g41260.1	protein|amine oxidase, flavin-containing, domain containing protein, expressed	NA	NA	GO:0006779|porphyrin-containing compound biosynthetic process GO:0009793|embryo development ending in seed dormancy GO:0009851|auxin biosynthetic process GO:0010229|inflorescence development GO:0048825|cotyledon development GO:0055114|oxidation-reduction process	GO:0004729|oxygen-dependent protoporphyrinogen oxidase activity GO:0016491|oxidoreductase activity	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009536|plastid GO:0009941|chloroplast envelope
pt2_03506	A	A1S	Potri.001G333600	Potri.001G333600(AS)	POPTR_0001s34120	sp|Q12955|ANK3_HUMAN	Ankyrin-3 OS=Homo sapiens GN=ANK3 PE=1 SV=3	AT5G14230.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 ortholog 2 in Arabidopsis thaliana (TAIR:AT5G57740.1); Has 66374 Blast hits to 25358 proteins in 1201 species: Archae - 121; Bacteria - 8133; Metazoa - 29530; Fungi - 5885; Plants - 3349; Viruses - 785; Other Eukaryotes - 18571 (source: NCBI BLink). | chr5:4591883-4595775 FORWARD LENGTH=751	LOC_Os04g41280.1	protein|ankyrin repeat domain containing protein, expressed	IMGA|Medtr5g077770.1	Potassium channel SKOR chr5 32204180-32193756 E EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_03507	A	A1S	Potri.001G333700	Potri.001G333700(AS)	POPTR_0001s34130	sp|B8FGE3|RRF_DESAA	Ribosome-recycling factor OS=Desulfatibacillum alkenivorans (strain AK-01) GN=frr PE=3 SV=1	AT3G01800.1	| Symbols: | Ribosome recycling factor | chr3:286020-287543 FORWARD LENGTH=267	LOC_Os04g41300.1	protein|ribosome recycling factor, putative, expressed	NA	NA	GO:0006412|translation GO:0006626|protein targeting to mitochondrion GO:0019408|dolichol biosynthetic process	NA	GO:0005739|mitochondrion
pt2_03508	A	A1S	Potri.001G333700	Potri.001G333700(AS)	POPTR_0001s34130	sp|B8FGE3|RRF_DESAA	Ribosome-recycling factor OS=Desulfatibacillum alkenivorans (strain AK-01) GN=frr PE=3 SV=1	AT3G01800.1	| Symbols: | Ribosome recycling factor | chr3:286020-287543 FORWARD LENGTH=267	LOC_Os04g41300.1	protein|ribosome recycling factor, putative, expressed	NA	NA	GO:0006412|translation GO:0006626|protein targeting to mitochondrion GO:0019408|dolichol biosynthetic process	NA	GO:0005739|mitochondrion
pt2_03509	A	A1S	Potri.001G333700	Potri.001G333700(AS)	POPTR_0001s34130	sp|B8FGE3|RRF_DESAA	Ribosome-recycling factor OS=Desulfatibacillum alkenivorans (strain AK-01) GN=frr PE=3 SV=1	AT3G01800.1	| Symbols: | Ribosome recycling factor | chr3:286020-287543 FORWARD LENGTH=267	LOC_Os04g41300.1	protein|ribosome recycling factor, putative, expressed	NA	NA	GO:0006412|translation GO:0006626|protein targeting to mitochondrion GO:0019408|dolichol biosynthetic process	NA	GO:0005739|mitochondrion
pt2_03510	A	A1S	Potri.001G333800	Potri.001G333800(AS)	POPTR_0001s34140	NA	NA	AT5G47455.3	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17310.2); Has 138 Blast hits to 138 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 138; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:19250805-19252229 FORWARD LENGTH=106	NA	NA	NA	NA	NA	NA	GO:0005739|mitochondrion
pt2_03511	A	A1S	Potri.001G333800	Potri.001G333800(AS)	POPTR_0001s34140	NA	NA	AT5G47455.3	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17310.2); Has 138 Blast hits to 138 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 138; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:19250805-19252229 FORWARD LENGTH=106	NA	NA	NA	NA	NA	NA	GO:0005739|mitochondrion
pt2_03512	A	A1S	Potri.001G333900	Potri.001G333900(AS)	POPTR_0001s34150	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006096|glycolysis GO:0006301|postreplication repair GO:0008150|biological_process GO:0009060|aerobic respiration GO:0046686|response to cadmium ion	NA	GO:0005739|mitochondrion GO:0005774|vacuolar membrane GO:0005886|plasma membrane GO:0009507|chloroplast GO:0016020|membrane
pt2_03513	A	A1S	Potri.001G334000	Potri.001G334000(AS)	POPTR_0001s34160	sp|B0K5S7|RL13_THEPX	50S ribosomal protein L13 OS=Thermoanaerobacter sp. (strain X514) GN=rplM PE=3 SV=1	AT3G01790.2	| Symbols: | Ribosomal protein L13 family protein | chr3:283880-285583 REVERSE LENGTH=205	LOC_Os08g06474.1	protein|ribosomal protein L13, putative, expressed	NA	NA	GO:0006354|DNA-dependent transcription, elongation GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005840|ribosome GO:0009507|chloroplast GO:0015934|large ribosomal subunit
pt2_03514	A	A1S	Potri.001G334100	Potri.001G334100(AS)	POPTR_0001s34170	sp|Q8MR62|VIAF1_DROME	Viral IAP-associated factor homolog OS=Drosophila melanogaster GN=viaf PE=1 SV=1	AT5G14240.1	| Symbols: | Thioredoxin superfamily protein | chr5:4596223-4597568 REVERSE LENGTH=256	LOC_Os01g08960.1	protein|phosducin-like protein 3, putative, expressed	IMGA|contig_85352_1.1	Phosducin-like protein contig_85352 2504-493 E PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005737|cytoplasm
pt2_03515	A	A1S	Potri.001G334200	Potri.001G334200(AS)	POPTR_0001s34180	sp|Q8W575|CSN3_ARATH	COP9 signalosome complex subunit 3 OS=Arabidopsis thaliana GN=CSN3 PE=1 SV=2	AT5G14250.1	| Symbols: COP13, CSN3, FUS11 | Proteasome component (PCI) domain protein | chr5:4597970-4600561 FORWARD LENGTH=429	LOC_Os08g02550.1	protein|proteasome subunit, putative, expressed	NA	NA	GO:0006312|mitotic recombination GO:0006396|RNA processing GO:0009560|embryo sac egg cell differentiation GO:0009640|photomorphogenesis GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009909|regulation of flower development GO:0009933|meristem structural organization GO:0010162|seed dormancy process GO:0010182|sugar mediated signaling pathway GO:0010228|vegetative to reproductive phase transition of meristem GO:0010388|cullin deneddylation GO:0016567|protein ubiquitination GO:0016571|histone methylation GO:0016579|protein deubiquitination GO:0019915|lipid storage GO:0045893|positive regulation of transcription, DNA-dependent GO:0050826|response to freezing GO:0051604|protein maturation	GO:0005515|protein binding	GO:0005829|cytosol GO:0008180|signalosome
pt2_03516	A	A1S	Potri.001G334300	Potri.001G334300(AS)	POPTR_0001s34190	sp|F4J8D3|TPLAT_ARATH	Protein TPLATE OS=Arabidopsis thaliana GN=TPLATE PE=1 SV=1	AT3G01780.1	| Symbols: TPLATE | ARM repeat superfamily protein | chr3:279171-283399 FORWARD LENGTH=1176	LOC_Os02g55010.1	protein|expressed protein	NA	NA	GO:0006897|endocytosis GO:0009555|pollen development GO:0030244|cellulose biosynthetic process GO:0048193|Golgi vesicle transport	NA	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane GO:0009504|cell plate GO:0009506|plasmodesma GO:0009524|phragmoplast
pt2_03517	A	A1S	Potri.001G334400	Potri.001G334400(AS)	POPTR_0001s34200	sp|Q84P23|4CLL9_ARATH	4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana GN=4CLL9 PE=1 SV=2	AT5G63380.1	| Symbols: | AMP-dependent synthetase and ligase family protein | chr5:25387581-25390026 REVERSE LENGTH=562	LOC_Os01g67530.1	protein|AMP-binding enzyme, putative, expressed	IMGA|Medtr5g027480.1	4-coumarate-CoA ligase chr5 11195434-11192919 H EGN_Mt100125 20111014	GO:0008152|metabolic process GO:0009695|jasmonic acid biosynthetic process	GO:0003824|catalytic activity GO:0004321|fatty-acyl-CoA synthase activity GO:0016207|4-coumarate-CoA ligase activity	GO:0005777|peroxisome
pt2_03518	A	A1S	Potri.001G334500	Potri.001G334500(AS)	POPTR_0001s34210	NA	NA	AT3G27250.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40800.1); Has 104 Blast hits to 104 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 104; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:10061633-10062481 FORWARD LENGTH=282	LOC_Os12g13910.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_03519	A	A1S	Potri.001G334600	Potri.001G334600(AS)	POPTR_0001s34220	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function GO:0005515|protein binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03520	A	A1S	Potri.001G334700	Potri.001G334700(AS)	POPTR_0001s34230	sp|O49858|C82A3_SOYBN	Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=2 SV=1	AT4G31970.1	| Symbols: CYP82C2 | cytochrome P450, family 82, subfamily C, polypeptide 2 | chr4:15462408-15464358 FORWARD LENGTH=523	LOC_Os09g26980.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g016410.1	Isoflavone 2'-hydroxylase chr5 5626688-5629619 F EGN_Mt100125 20111014	GO:0010043|response to zinc ion GO:0055114|oxidation-reduction process GO:0071281|cellular response to iron ion	GO:0004497|monooxygenase activity GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0009507|chloroplast
pt2_03521	A	A1S	Potri.001G334800	Potri.001G334800(AS)	POPTR_0001s34240	sp|Q9LK31|Y3272_ARATH	Kelch repeat-containing protein At3g27220 OS=Arabidopsis thaliana GN=At3g27220 PE=1 SV=1	AT3G27220.1	| Symbols: | Galactose oxidase/kelch repeat superfamily protein | chr3:10051742-10053594 REVERSE LENGTH=426	LOC_Os04g41020.1	protein|kelch repeat protein, putative, expressed	NA	NA	GO:0009061|anaerobic respiration GO:0009855|determination of bilateral symmetry GO:0009944|polarity specification of adaxial/abaxial axis GO:0010014|meristem initiation GO:0010075|regulation of meristem growth	NA	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_03522	A	A2S	Potri.001G223100	Potri.001G223100(AS) Potri.001G223000(AS)	POPTR_0001s34250	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03523	R	R	NA	NA	POPTR_0001s34260	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03524	B	B2S	Potri.001G257000	Potri.001G257000(BS) Potri.009G052600(DS)	POPTR_0001s34270	sp|O82802|SIR1_TOBAC	Sulfite reductase 1 [ferredoxin], chloroplastic OS=Nicotiana tabacum GN=SIR1 PE=1 SV=1	AT5G04590.1	| Symbols: SIR | sulfite reductase | chr5:1319404-1322298 FORWARD LENGTH=642	LOC_Os05g42350.1	protein|ferredoxin--nitrite reductase, putative, expressed	NA	NA	GO:0006096|glycolysis GO:0006833|water transport GO:0006972|hyperosmotic response GO:0007030|Golgi organization GO:0009266|response to temperature stimulus GO:0009409|response to cold GO:0009651|response to salt stress GO:0009684|indoleacetic acid biosynthetic process GO:0016126|sterol biosynthetic process GO:0019344|cysteine biosynthetic process GO:0019419|sulfate reduction GO:0019761|glucosinolate biosynthetic process GO:0046686|response to cadmium ion GO:0055114|oxidation-reduction process	GO:0005507|copper ion binding GO:0016002|sulfite reductase activity GO:0016491|oxidoreductase activity GO:0020037|heme binding GO:0050311|sulfite reductase (ferredoxin) activity GO:0051536|iron-sulfur cluster binding GO:0051539|4 iron, 4 sulfur cluster binding	GO:0005737|cytoplasm GO:0009507|chloroplast GO:0009536|plastid GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope GO:0010319|stromule GO:0016020|membrane GO:0048046|apoplast
pt2_03525	A	A1S	Potri.001G354900	Potri.001G354900(AS)	POPTR_0001s34280	sp|Q9M0M2|AB9B_ARATH	ABC transporter B family member 9 OS=Arabidopsis thaliana GN=ABCB9 PE=2 SV=2	AT4G18050.1	| Symbols: PGP9 | P-glycoprotein 9 | chr4:10022205-10027280 FORWARD LENGTH=1236	LOC_Os01g50160.1	protein|MDR-like ABC transporter, putative, expressed	IMGA|Medtr1g086080.1	ABC transporter B family member chr1 22880421-22874428 E EGN_Mt100125 20111014	GO:0006810|transport GO:0055085|transmembrane transport	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0016021|integral to membrane
pt2_03526	A	A1S	Potri.001G354700	Potri.001G354700(AS)	POPTR_0001s34290	NA	NA	AT4G18060.1	| Symbols: | SH3 domain-containing protein | chr4:10027668-10029662 REVERSE LENGTH=351	LOC_Os07g32460.1	protein|src homology-3 domain protein 3, putative, expressed	IMGA|Medtr5g026400.1	Rho guanine nucleotide exchange factor chr5 10603873-10598440 F EGN_Mt100125 20111014	GO:0000023|maltose metabolic process GO:0006084|acetyl-CoA metabolic process GO:0007020|microtubule nucleation GO:0016126|sterol biosynthetic process GO:0016132|brassinosteroid biosynthetic process GO:0019252|starch biosynthetic process GO:0043085|positive regulation of catalytic activity	GO:0030276|clathrin binding	NA
pt2_03527	A	A1S	Potri.001G354800	Potri.001G354800(AS)	POPTR_0001s34300	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03528	A	A1S	Potri.001G354600	Potri.001G354600(AS)	POPTR_0001s34310	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03529	A	A1S	Potri.001G354500	Potri.001G354500(AS)	POPTR_0001s34320	NA	NA	AT1G29520.1	| Symbols: | AWPM-19-like family protein | chr1:10323735-10324525 FORWARD LENGTH=158	LOC_Os01g50440.1	protein|AWPM-19-like membrane family protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0016020|membrane
pt2_03530	A	A1S	Potri.001G354400	Potri.001G354400(AS)	POPTR_0001s34330	sp|Q9FHF9|PP419_ARATH	Pentatricopeptide repeat-containing protein At5g46460, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H49 PE=2 SV=1	AT5G46460.1	| Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr5:18840305-18842398 FORWARD LENGTH=697	LOC_Os02g05720.1	protein|pentatricopeptide repeat protein PPR986-12, putative, expressed	IMGA|Medtr5g008600.1	Pentatricopeptide repeat-containing protein chr5 1604164-1608184 H EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005739|mitochondrion
pt2_03531	A	A1S	Potri.001G354200	Potri.001G354200(AS)	POPTR_0001s34340	sp|Q9LJN4|BXL5_ARATH	Probable beta-D-xylosidase 5 OS=Arabidopsis thaliana GN=BXL5 PE=2 SV=2	AT3G19620.1	| Symbols: | Glycosyl hydrolase family protein | chr3:6815613-6818308 REVERSE LENGTH=781	LOC_Os01g19220.1	protein|beta-D-xylosidase, putative, expressed	IMGA|Medtr5g062430.1	Xylan 1 4-beta-xylosidase chr5 25153086-25159051 E EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0005576|extracellular region GO:0005618|cell wall
pt2_03532	A	A1S	Potri.001G354100	Potri.001G354100(AS)	POPTR_0001s34350	sp|Q94KD8|BXL2_ARATH	Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana GN=BXL2 PE=2 SV=1	AT1G02640.1	| Symbols: BXL2, ATBXL2 | beta-xylosidase 2 | chr1:564293-567580 FORWARD LENGTH=768	LOC_Os11g47350.1	protein|beta-D-xylosidase, putative, expressed	IMGA|Medtr5g062430.1	Xylan 1 4-beta-xylosidase chr5 25153086-25159051 E EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0046685|response to arsenic-containing substance	GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0005576|extracellular region GO:0009505|plant-type cell wall
pt2_03533	B	B1S	Potri.001G354000	Potri.001G354000(BS)	POPTR_0001s34360	sp|Q9STT2|VPS29_ARATH	Vacuolar protein sorting-associated protein 29 OS=Arabidopsis thaliana GN=VPS29 PE=2 SV=1	AT3G47810.3	| Symbols: MAG1 | Calcineurin-like metallo-phosphoesterase superfamily protein | chr3:17637256-17639017 REVERSE LENGTH=190	LOC_Os02g16550.1	protein|Ser/Thr protein phosphatase family protein, putative, expressed	IMGA|Medtr5g085380.1	Vacuolar protein sorting chr5 35896608-35900746 F EGN_Mt100125 20111014	GO:0006511|ubiquitin-dependent protein catabolic process GO:0006623|protein targeting to vacuole GO:0006944|cellular membrane fusion GO:0008333|endosome to lysosome transport GO:0009853|photorespiration GO:0016192|vesicle-mediated transport GO:0016197|endosomal transport GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	GO:0004722|protein serine/threonine phosphatase activity GO:0016788|hydrolase activity, acting on ester bonds	GO:0005771|multivesicular body GO:0016020|membrane GO:0030904|retromer complex GO:0043231|intracellular membrane-bounded organelle
pt2_03534	A	A1S	Potri.001G353900	Potri.001G353900(AS)	POPTR_0001s34370	sp|P49211|RL321_ARATH	60S ribosomal protein L32-1 OS=Arabidopsis thaliana GN=RPL32A PE=2 SV=2	AT4G18100.1	| Symbols: | Ribosomal protein L32e | chr4:10035715-10036475 REVERSE LENGTH=133	LOC_Os09g32532.1	protein|60S ribosomal protein L32, putative, expressed	NA	NA	GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005730|nucleolus GO:0005737|cytoplasm GO:0005829|cytosol GO:0005840|ribosome GO:0022625|cytosolic large ribosomal subunit GO:0022626|cytosolic ribosome
pt2_03535	A	A1S	Potri.001G353800	Potri.001G353800(AS)	POPTR_0001s34380	sp|A5GI62|RIMM_SYNPW	Ribosome maturation factor RimM OS=Synechococcus sp. (strain WH7803) GN=rimM PE=3 SV=1	AT5G46420.1	| Symbols: | 16S rRNA processing protein RimM family | chr5:18829999-18832893 FORWARD LENGTH=653	LOC_Os05g49130.1	protein|16S rRNA processing protein RimM containing protein, expressed	NA	NA	GO:0000023|maltose metabolic process GO:0006364|rRNA processing GO:0008152|metabolic process GO:0010267|production of ta-siRNAs involved in RNA interference GO:0019252|starch biosynthetic process GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0043085|positive regulation of catalytic activity GO:0051607|defense response to virus	GO:0016779|nucleotidyltransferase activity GO:0043022|ribosome binding	GO:0005840|ribosome GO:0009507|chloroplast
pt2_03536	A	A1S	Potri.001G353700	Potri.001G353700(AS)	POPTR_0001s34390	sp|Q05D32|CTSL2_HUMAN	CTD small phosphatase-like protein 2 OS=Homo sapiens GN=CTDSPL2 PE=1 SV=2	AT5G46410.2	| Symbols: SSP4 | SCP1-like small phosphatase 4 | chr5:18826007-18828156 FORWARD LENGTH=456	LOC_Os01g43870.4	protein|NLI interacting factor-like phosphatase, putative, expressed	IMGA|Medtr5g045920.1	CTD small phosphatase-like protein chr5 19725690-19724505 H EGN_Mt100125 20111014	GO:0006470|protein dephosphorylation GO:0006888|ER to Golgi vesicle-mediated transport GO:0009610|response to symbiotic fungus GO:0043090|amino acid import	GO:0008420|CTD phosphatase activity GO:0016791|phosphatase activity	GO:0005634|nucleus
pt2_03537	A	A1S	Potri.001G353700	Potri.001G353700(AS)	POPTR_0001s34390	sp|Q05D32|CTSL2_HUMAN	CTD small phosphatase-like protein 2 OS=Homo sapiens GN=CTDSPL2 PE=1 SV=2	AT5G46410.2	| Symbols: SSP4 | SCP1-like small phosphatase 4 | chr5:18826007-18828156 FORWARD LENGTH=456	LOC_Os01g43870.4	protein|NLI interacting factor-like phosphatase, putative, expressed	IMGA|Medtr5g045920.1	CTD small phosphatase-like protein chr5 19725690-19724505 H EGN_Mt100125 20111014	GO:0006470|protein dephosphorylation GO:0006888|ER to Golgi vesicle-mediated transport GO:0009610|response to symbiotic fungus GO:0043090|amino acid import	GO:0008420|CTD phosphatase activity GO:0016791|phosphatase activity	GO:0005634|nucleus
pt2_03538	A	A2S	Potri.001G353700	Potri.001G353700(AS) Potri.011G078300(DS)	POPTR_0001s34390	sp|Q05D32|CTSL2_HUMAN	CTD small phosphatase-like protein 2 OS=Homo sapiens GN=CTDSPL2 PE=1 SV=2	AT5G46410.2	| Symbols: SSP4 | SCP1-like small phosphatase 4 | chr5:18826007-18828156 FORWARD LENGTH=456	LOC_Os01g43870.4	protein|NLI interacting factor-like phosphatase, putative, expressed	IMGA|Medtr5g045920.1	CTD small phosphatase-like protein chr5 19725690-19724505 H EGN_Mt100125 20111014	GO:0006470|protein dephosphorylation GO:0006888|ER to Golgi vesicle-mediated transport GO:0009610|response to symbiotic fungus GO:0043090|amino acid import	GO:0008420|CTD phosphatase activity GO:0016791|phosphatase activity	GO:0005634|nucleus
pt2_03539	A	A1S	Potri.001G353700	Potri.001G353700(AS)	POPTR_0001s34390	sp|Q05D32|CTSL2_HUMAN	CTD small phosphatase-like protein 2 OS=Homo sapiens GN=CTDSPL2 PE=1 SV=2	AT5G46410.2	| Symbols: SSP4 | SCP1-like small phosphatase 4 | chr5:18826007-18828156 FORWARD LENGTH=456	LOC_Os01g43870.4	protein|NLI interacting factor-like phosphatase, putative, expressed	IMGA|Medtr5g045920.1	CTD small phosphatase-like protein chr5 19725690-19724505 H EGN_Mt100125 20111014	GO:0006470|protein dephosphorylation GO:0006888|ER to Golgi vesicle-mediated transport GO:0009610|response to symbiotic fungus GO:0043090|amino acid import	GO:0008420|CTD phosphatase activity GO:0016791|phosphatase activity	GO:0005634|nucleus
pt2_03540	A	A1S	Potri.001G353700	Potri.001G353700(AS)	POPTR_0001s34390	sp|Q05D32|CTSL2_HUMAN	CTD small phosphatase-like protein 2 OS=Homo sapiens GN=CTDSPL2 PE=1 SV=2	AT5G46410.2	| Symbols: SSP4 | SCP1-like small phosphatase 4 | chr5:18826007-18828156 FORWARD LENGTH=456	LOC_Os01g43870.4	protein|NLI interacting factor-like phosphatase, putative, expressed	IMGA|Medtr5g045920.1	CTD small phosphatase-like protein chr5 19725690-19724505 H EGN_Mt100125 20111014	GO:0006470|protein dephosphorylation GO:0006888|ER to Golgi vesicle-mediated transport GO:0009610|response to symbiotic fungus GO:0043090|amino acid import	GO:0008420|CTD phosphatase activity GO:0016791|phosphatase activity	GO:0005634|nucleus
pt2_03541	A	A1S	Potri.001G353600	Potri.001G353600(AS)	POPTR_0001s34400	NA	NA	AT1G76750.1	| Symbols: | Protein of unknown function (DUF1278) | chr1:28811107-28811583 FORWARD LENGTH=158	LOC_Os03g18530.1	protein|ECAGL1 - ECA1 gametogenesis related family protein precursor, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_03542	A	A1S	Potri.001G353500	Potri.001G353500(AS)	POPTR_0001s34410	NA	NA	AT1G29395.1	| Symbols: COR414-TM1, COR413IM1, COR413-TM1 | COLD REGULATED 314 INNER MEMBRANE 1 | chr1:10288345-10289539 REVERSE LENGTH=225	LOC_Os05g49170.1	protein|cold acclimation protein WCOR413, putative, expressed	NA	NA	GO:0006950|response to stress GO:0009631|cold acclimation GO:0030003|cellular cation homeostasis GO:0042631|cellular response to water deprivation GO:0070417|cellular response to cold GO:0070838|divalent metal ion transport	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0009535|chloroplast thylakoid membrane GO:0009941|chloroplast envelope GO:0031357|integral to chloroplast inner membrane
pt2_03543	A	A1S	Potri.001G353400	Potri.001G353400(AS)	POPTR_0001s34415	sp|O65399|E131_ARATH	Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana GN=At1g11820 PE=1 SV=3	AT1G29380.1	| Symbols: | Carbohydrate-binding X8 domain superfamily protein | chr1:10284209-10285671 FORWARD LENGTH=315	LOC_Os01g44090.1	protein|X8 domain containing protein, expressed	IMGA|Medtr5g091650.1	"Glucan endo-1,3-beta-glucosidase-like protein" chr5 38927441-38930905 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005886|plasma membrane
pt2_03544	A	A1S	Potri.001G353400	Potri.001G353400(AS)	POPTR_0001s34420	sp|O65399|E131_ARATH	Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana GN=At1g11820 PE=1 SV=3	AT1G29380.1	| Symbols: | Carbohydrate-binding X8 domain superfamily protein | chr1:10284209-10285671 FORWARD LENGTH=315	LOC_Os01g44090.1	protein|X8 domain containing protein, expressed	IMGA|Medtr5g091650.1	"Glucan endo-1,3-beta-glucosidase-like protein" chr5 38927441-38930905 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005886|plasma membrane
pt2_03545	A	A1S	Potri.001G353300	Potri.001G353300(AS)	POPTR_0001s34430	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03546	A	A1S	Potri.001G353100	Potri.001G353100(AS)	POPTR_0001s34440	NA	NA	AT1G29350.1	| Symbols: | Kinase-related protein of unknown function (DUF1296) | chr1:10268761-10273613 REVERSE LENGTH=831	LOC_Os01g47430.2	protein|protein of unknown function DUF1296 domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_03547	A	A1S	Potri.001G353200	Potri.001G353200(AS)	POPTR_0001s34450	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03548	A	A1S	Potri.001G353000	Potri.001G353000(AS)	POPTR_0001s34460	NA	NA	AT1G29820.2	| Symbols: | Magnesium transporter CorA-like family protein | chr1:10438219-10440625 FORWARD LENGTH=540	LOC_Os01g47460.1	protein|expressed protein	IMGA|Medtr5g091570.1	hypothetical protein chr5 38893618-38888297 E EGN_Mt100125 20111014	GO:0030001|metal ion transport GO:0055085|transmembrane transport	GO:0046873|metal ion transmembrane transporter activity	GO:0005634|nucleus GO:0016020|membrane
pt2_03549	A	A1S	Potri.001G352900	Potri.001G352900(AS)	POPTR_0001s34470	sp|Q940S5|COPZ1_ARATH	Coatomer subunit zeta-1 OS=Arabidopsis thaliana GN=At1g60970 PE=2 SV=1	AT1G60970.1	| Symbols: | SNARE-like superfamily protein | chr1:22448008-22449387 REVERSE LENGTH=177	LOC_Os02g21250.2	protein|clathrin adaptor complex small chain domain containing protein, expressed	NA	NA	GO:0006457|protein folding GO:0006810|transport GO:0006886|intracellular protein transport GO:0009408|response to heat GO:0009644|response to high light intensity GO:0034976|response to endoplasmic reticulum stress GO:0042542|response to hydrogen peroxide GO:0045893|positive regulation of transcription, DNA-dependent	NA	GO:0030125|clathrin vesicle coat
pt2_03550	A	A1S	Potri.001G352800	Potri.001G352800(AS)	POPTR_0001s34480	sp|Q60BH8|PHS_METCA	Putative pterin-4-alpha-carbinolamine dehydratase OS=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) GN=MCA0497 PE=3 SV=1	AT1G29810.1	| Symbols: | Transcriptional coactivator/pterin dehydratase | chr1:10435606-10437406 REVERSE LENGTH=187	LOC_Os01g47420.1	protein|pterin-4-alpha-carbinolamine dehydratase, putative, expressed	IMGA|Medtr5g019990.1	PCD/DCoH-like protein chr5 7328578-7331365 E EGN_Mt100125 20111014	GO:0006729|tetrahydrobiopterin biosynthetic process	GO:0004160|dihydroxy-acid dehydratase activity GO:0008124|4-alpha-hydroxytetrahydrobiopterin dehydratase activity	GO:0009507|chloroplast
pt2_03551	A	A1S	Potri.001G352700	Potri.001G352700(AS)	POPTR_0001s34490	NA	NA	AT1G29790.2	| Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr1:10430025-10431161 FORWARD LENGTH=378	LOC_Os10g42770.1	protein|a_IG002N01.7, putative, expressed	IMGA|contig_51583_4.1	Unknown protein contig_51583 9015-4675 E PREDN 20111014	NA	GO:0003674|molecular_function GO:0008168|methyltransferase activity	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0005886|plasma membrane
pt2_03552	A	A1S	Potri.001G352600	Potri.001G352600(AS)	POPTR_0001s34500	sp|Q5RBT0|PDCD5_PONAB	Programmed cell death protein 5 OS=Pongo abelii GN=PDCD5 PE=2 SV=3	AT1G29850.1	| Symbols: | double-stranded DNA-binding family protein | chr1:10447866-10449630 FORWARD LENGTH=129	LOC_Os05g47446.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003677|DNA binding GO:0003690|double-stranded DNA binding	GO:0005829|cytosol
pt2_03553	A	A1S	Potri.001G352500	Potri.001G352500(AS)	POPTR_0001s34510	sp|Q9SVV6|TPK3_ARATH	Two-pore potassium channel 3 OS=Arabidopsis thaliana GN=TPK3 PE=2 SV=1	AT4G18160.1	| Symbols: KCO6, ATTPK3, ATKCO6, TPK3 | Ca2+ activated outward rectifying K+ channel 6 | chr4:10055696-10057546 FORWARD LENGTH=436	LOC_Os09g12790.1	protein|potassium channel protein, putative, expressed	IMGA|Medtr5g095650.1	Outward rectifying potassium channel chr5 40770179-40772279 E EGN_Mt100125 20111014	GO:0071805|potassium ion transmembrane transport	GO:0005267|potassium channel activity GO:0015271|outward rectifier potassium channel activity	GO:0009705|plant-type vacuole membrane GO:0016020|membrane
pt2_03554	A	A1S	Potri.001G352400	Potri.001G352400(AS)	POPTR_0001s34520	sp|Q93WV4|WRK71_ARATH	Probable WRKY transcription factor 71 OS=Arabidopsis thaliana GN=WRKY71 PE=2 SV=1	AT1G29860.1	| Symbols: WRKY71, ATWRKY71 | WRKY DNA-binding protein 71 | chr1:10454482-10455652 FORWARD LENGTH=282	LOC_Os01g47560.1	protein|WRKY16, expressed	IMGA|Medtr5g091390.1	WRKY transcription factor chr5 38797564-38795236 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006865|amino acid transport GO:0009407|toxin catabolic process GO:0010583|response to cyclopentenone	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_03555	A	A1S	Potri.001G352300	Potri.001G352300(AS)	POPTR_0001s34530	sp|Q96PB1|CASD1_HUMAN	CAS1 domain-containing protein 1 OS=Homo sapiens GN=CASD1 PE=2 SV=1	AT2G34410.2	| Symbols: | O-acetyltransferase family protein | chr2:14518719-14522053 FORWARD LENGTH=540	LOC_Os01g44040.1	protein|CAS1 domain-containing protein 1 precursor, putative, expressed	NA	NA	NA	GO:0016413|O-acetyltransferase activity	GO:0005794|Golgi apparatus GO:0009507|chloroplast
pt2_03556	A	A1S	Potri.001G352200	Potri.001G352200(AS)	POPTR_0001s34540	sp|O49726|PUP9_ARATH	Probable purine permease 9 OS=Arabidopsis thaliana GN=PUP9 PE=2 SV=2	AT4G18220.1	| Symbols: | Drug/metabolite transporter superfamily protein | chr4:10078768-10080109 FORWARD LENGTH=344	LOC_Os02g46380.1	protein|purine permease, putative, expressed	IMGA|Medtr5g065080.1	Purine permease chr5 26371801-26373742 H EGN_Mt100125 20111014	GO:0006863|purine nucleobase transport GO:0009624|response to nematode GO:0015931|nucleobase-containing compound transport	GO:0005345|purine nucleobase transmembrane transporter activity	GO:0005737|cytoplasm GO:0016020|membrane
pt2_03557	A	A1S	Potri.001G352100	Potri.001G352100(AS)	POPTR_0001s34550	sp|O49726|PUP9_ARATH	Probable purine permease 9 OS=Arabidopsis thaliana GN=PUP9 PE=2 SV=2	AT4G18210.1	| Symbols: ATPUP10, PUP10 | purine permease 10 | chr4:10076175-10077495 FORWARD LENGTH=390	LOC_Os02g46380.1	protein|purine permease, putative, expressed	IMGA|Medtr5g065080.1	Purine permease chr5 26371801-26373742 H EGN_Mt100125 20111014	GO:0006863|purine nucleobase transport GO:0009624|response to nematode GO:0015931|nucleobase-containing compound transport	GO:0005345|purine nucleobase transmembrane transporter activity	GO:0005737|cytoplasm GO:0016020|membrane
pt2_03558	A	A1S	Potri.001G352000	Potri.001G352000(AS)	POPTR_0001s34560	sp|Q9D081|ALG14_MOUSE	UDP-N-acetylglucosamine transferase subunit ALG14 homolog OS=Mus musculus GN=Alg14 PE=2 SV=1	AT4G18230.1	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligosaccharide biosynthesis protein Alg14 like (InterPro:IPR013969); Has 640 Blast hits to 640 proteins in 277 species: Archae - 4; Bacteria - 281; Metazoa - 94; Fungi - 127; Plants - 57; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). | chr4:10080521-10081710 REVERSE LENGTH=233	LOC_Os03g30934.5	protein|UDP-N-acetylglucosamine transferase subunit ALG14, putative, expressed	IMGA|Medtr5g029710.1	hypothetical protein chr5 12250083-12251383 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_03559	A	A1S	Potri.001G351800	Potri.001G351800(AS)	POPTR_0001s34570	sp|Q6MAS9|GLGA_PARUW	Glycogen synthase OS=Protochlamydia amoebophila (strain UWE25) GN=glgA PE=3 SV=1	AT4G18240.1	| Symbols: ATSS4, SSIV, SS4 | starch synthase 4 | chr4:10082221-10087044 FORWARD LENGTH=1040	LOC_Os05g45720.1	protein|starch synthase, putative, expressed	IMGA|Medtr5g030600.1	Starch synthase V chr5 12624794-12620557 E EGN_Mt100125 20111014	GO:0000272|polysaccharide catabolic process GO:0001666|response to hypoxia GO:0005982|starch metabolic process GO:0009058|biosynthetic process GO:0009250|glucan biosynthetic process GO:0009664|plant-type cell wall organization GO:0019252|starch biosynthetic process GO:0019375|galactolipid biosynthetic process	GO:0009011|starch synthase activity GO:0016757|transferase activity, transferring glycosyl groups	GO:0009507|chloroplast
pt2_03560	B	B1S	Potri.001G351800	Potri.001G351800(BS)	POPTR_0001s34580	sp|Q6MAS9|GLGA_PARUW	Glycogen synthase OS=Protochlamydia amoebophila (strain UWE25) GN=glgA PE=3 SV=1	AT4G18240.1	| Symbols: ATSS4, SSIV, SS4 | starch synthase 4 | chr4:10082221-10087044 FORWARD LENGTH=1040	LOC_Os05g45720.1	protein|starch synthase, putative, expressed	IMGA|Medtr5g030600.1	Starch synthase V chr5 12624794-12620557 E EGN_Mt100125 20111014	GO:0000272|polysaccharide catabolic process GO:0001666|response to hypoxia GO:0005982|starch metabolic process GO:0009058|biosynthetic process GO:0009250|glucan biosynthetic process GO:0009664|plant-type cell wall organization GO:0019252|starch biosynthetic process GO:0019375|galactolipid biosynthetic process	GO:0009011|starch synthase activity GO:0016757|transferase activity, transferring glycosyl groups	GO:0009507|chloroplast
pt2_03561	A	A1S	Potri.001G351600	Potri.001G351600(AS)	POPTR_0001s34590	sp|P52409|E13B_WHEAT	Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1	AT1G78520.1	| Symbols: | Carbohydrate-binding X8 domain superfamily protein | chr1:29537976-29538656 REVERSE LENGTH=115	LOC_Os01g14140.1	protein|X8 domain containing protein, expressed	IMGA|Medtr5g091650.1	"Glucan endo-1,3-beta-glucosidase-like protein" chr5 38927441-38930905 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005886|plasma membrane
pt2_03562	A	A1S	Potri.001G351500	Potri.001G351500(AS)	POPTR_0001s34600	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03563	R	R	NA	NA	POPTR_0001s34610	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03564	A	A1S	Potri.001G351400	Potri.001G351400(AS)	POPTR_0001s34620	sp|O49939|TLP40_SPIOL	Peptidyl-prolyl cis-trans isomerase, chloroplastic OS=Spinacia oleracea GN=TLP40 PE=1 SV=1	AT3G01480.1	| Symbols: CYP38, ATCYP38 | cyclophilin 38 | chr3:188569-190674 FORWARD LENGTH=437	LOC_Os08g29370.1	protein|peptidyl-prolyl cis-trans isomerase, chloroplast precursor, putative, expressed	IMGA|contig_80595_1.1	Peptidyl-prolyl cis-trans isomerase cyclophilin-type contig_80595 961-3457 E PREDN 20111014	GO:0000165|MAPK cascade GO:0002831|regulation of response to biotic stimulus GO:0006098|pentose-phosphate shunt GO:0006364|rRNA processing GO:0006457|protein folding GO:0006612|protein targeting to membrane GO:0006636|unsaturated fatty acid biosynthetic process GO:0009409|response to cold GO:0009595|detection of biotic stimulus GO:0009657|plastid organization GO:0009697|salicylic acid biosynthetic process GO:0009773|photosynthetic electron transport in photosystem I GO:0009814|defense response, incompatible interaction GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009902|chloroplast relocation GO:0010027|thylakoid membrane organization GO:0010103|stomatal complex morphogenesis GO:0010200|response to chitin GO:0010207|photosystem II assembly GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0015995|chlorophyll biosynthetic process GO:0016117|carotenoid biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019684|photosynthesis, light reaction GO:0031348|negative regulation of defense response GO:0035304|regulation of protein dephosphorylation GO:0042549|photosystem II stabilization GO:0042742|defense response to bacterium GO:0042793|transcription from plastid promoter GO:0043900|regulation of multi-organism process GO:0045893|positive regulation of transcription, DNA-dependent GO:0050832|defense response to fungus	GO:0003755|peptidyl-prolyl cis-trans isomerase activity	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009543|chloroplast thylakoid lumen GO:0009570|chloroplast stroma GO:0009579|thylakoid GO:0031977|thylakoid lumen
pt2_03565	A	A1S	Potri.001G351300	Potri.001G351300(AS)	POPTR_0001s34630	sp|Q2MHE4|HT1_ARATH	Serine/threonine-protein kinase HT1 OS=Arabidopsis thaliana GN=HT1 PE=1 SV=1	AT3G01490.1	| Symbols: | Protein kinase superfamily protein | chr3:191095-193258 REVERSE LENGTH=411	LOC_Os05g50190.1	protein|protein kinase domain containing protein, expressed	IMGA|Medtr5g006560.1	Kinase-like protein chr5 745796-749508 F EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004712|protein serine/threonine/tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005575|cellular_component
pt2_03566	A	A1S	Potri.001G351200	Potri.001G351200(AS)	POPTR_0001s34640	sp|Q9M9V7|PTR8_ARATH	Probable peptide/nitrate transporter At1g18880 OS=Arabidopsis thaliana GN=At1g18880 PE=2 SV=1	AT1G18880.1	| Symbols: | Major facilitator superfamily protein | chr1:6520800-6523241 FORWARD LENGTH=587	LOC_Os03g48180.1	protein|peptide transporter PTR2, putative, expressed	IMGA|Medtr5g038060.1	Peptide transporter PTR1 chr5 16203327-16198603 F EGN_Mt100125 20111014	GO:0006857|oligopeptide transport GO:0080167|response to karrikin GO:0090449|phloem glucosinolate loading GO:1901349|glucosinolate transport	GO:0005215|transporter activity GO:0090448|glucosinolate:hydrogen symporter activity	GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane
pt2_03567	A	A1S	Potri.001G351100	Potri.001G351100(AS)	POPTR_0001s34650	sp|Q54S83|MIDA_DICDI	Protein midA, mitochondrial OS=Dictyostelium discoideum GN=midA PE=2 SV=1	AT3G28700.1	| Symbols: | Protein of unknown function (DUF185) | chr3:10759580-10761834 FORWARD LENGTH=471	LOC_Os01g40620.2	protein|Uncharacterized ACR, COG1565 containing protein, putative, expressed	NA	NA	GO:0008150|biological_process GO:0015979|photosynthesis GO:0045333|cellular respiration	GO:0008270|zinc ion binding	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_03568	A	A1S	Potri.001G351000	Potri.001G351000(AS)	POPTR_0001s34660	sp|Q9LHA7|PER31_ARATH	Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=2 SV=1	AT3G28200.1	| Symbols: | Peroxidase superfamily protein | chr3:10518082-10519032 FORWARD LENGTH=316	LOC_Os02g50770.1	protein|peroxidase precursor, putative, expressed	IMGA|Medtr5g016010.1	Peroxidase chr5 5397722-5395410 E EGN_Mt100125 20111014	GO:0006979|response to oxidative stress GO:0016126|sterol biosynthetic process GO:0055114|oxidation-reduction process	GO:0004601|peroxidase activity GO:0005515|protein binding GO:0020037|heme binding	GO:0005576|extracellular region GO:0005829|cytosol GO:0009505|plant-type cell wall
pt2_03569	A	A1S	Potri.001G350900	Potri.001G350900(AS)	POPTR_0001s34670	sp|P41349|FTRC2_SPIOL	Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Spinacia oleracea PE=2 SV=1	AT2G04700.1	| Symbols: | ferredoxin thioredoxin reductase catalytic beta chain family protein | chr2:1646961-1648345 FORWARD LENGTH=146	LOC_Os09g07570.1	protein|ferredoxin-thioredoxin reductase catalytic chain, chloroplast precursor, putative, expressed	NA	NA	GO:0000023|maltose metabolic process GO:0019252|starch biosynthetic process GO:0043085|positive regulation of catalytic activity GO:0055114|oxidation-reduction process	GO:0008937|ferredoxin-NAD(P) reductase activity GO:0030385|ferredoxin:thioredoxin reductase activity	GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope
pt2_03570	C	C1S	Potri.001G350900	Potri.001G350900(CS)	sp|P41349|FTRC2_SPIOL	Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Spinacia oleracea PE=2 SV=1	AT2G04700.1	| Symbols: | ferredoxin thioredoxin reductase catalytic beta chain family protein | chr2:1646961-1648345 FORWARD LENGTH=146	LOC_Os09g07570.1	protein|ferredoxin-thioredoxin reductase catalytic chain, chloroplast precursor, putative, expressed	NA	NA	GO:0000023|maltose metabolic process GO:0019252|starch biosynthetic process GO:0043085|positive regulation of catalytic activity GO:0055114|oxidation-reduction process	GO:0008937|ferredoxin-NAD(P) reductase activity GO:0030385|ferredoxin:thioredoxin reductase activity	GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope
pt2_03571	A	A1S	Potri.001G350900	Potri.001G350900(AS)	POPTR_0001s34690	sp|P41349|FTRC2_SPIOL	Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Spinacia oleracea PE=2 SV=1	AT2G04700.1	| Symbols: | ferredoxin thioredoxin reductase catalytic beta chain family protein | chr2:1646961-1648345 FORWARD LENGTH=146	LOC_Os09g07570.1	protein|ferredoxin-thioredoxin reductase catalytic chain, chloroplast precursor, putative, expressed	NA	NA	GO:0000023|maltose metabolic process GO:0019252|starch biosynthetic process GO:0043085|positive regulation of catalytic activity GO:0055114|oxidation-reduction process	GO:0008937|ferredoxin-NAD(P) reductase activity GO:0030385|ferredoxin:thioredoxin reductase activity	GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope
pt2_03572	A	A1S	Potri.001G350800	Potri.001G350800(AS)	POPTR_0001s34700	sp|Q9FYT6|CRS1_MAIZE	Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic OS=Zea mays GN=CRS1 PE=1 SV=1	AT3G01370.1	| Symbols: ATCFM2, CFM2 | CRM family member 2 | chr3:139033-143477 FORWARD LENGTH=1011	LOC_Os04g39060.1	protein|CRS1/YhbY domain containing protein, expressed	NA	NA	GO:0000372|Group I intron splicing GO:0000373|Group II intron splicing	GO:0003723|RNA binding	GO:0009507|chloroplast
pt2_03573	C	C1S	Potri.001G350800	Potri.001G350800(CS)	sp|Q9FYT6|CRS1_MAIZE	Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic OS=Zea mays GN=CRS1 PE=1 SV=1	AT3G01370.1	| Symbols: ATCFM2, CFM2 | CRM family member 2 | chr3:139033-143477 FORWARD LENGTH=1011	LOC_Os04g39060.1	protein|CRS1/YhbY domain containing protein, expressed	NA	NA	GO:0000372|Group I intron splicing GO:0000373|Group II intron splicing	GO:0003723|RNA binding	GO:0009507|chloroplast
pt2_03574	A	A1S	Potri.001G350800	Potri.001G350800(AS)	POPTR_0001s34720	sp|Q9FYT6|CRS1_MAIZE	Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic OS=Zea mays GN=CRS1 PE=1 SV=1	AT3G01370.1	| Symbols: ATCFM2, CFM2 | CRM family member 2 | chr3:139033-143477 FORWARD LENGTH=1011	LOC_Os04g39060.1	protein|CRS1/YhbY domain containing protein, expressed	NA	NA	GO:0000372|Group I intron splicing GO:0000373|Group II intron splicing	GO:0003723|RNA binding	GO:0009507|chloroplast
pt2_03575	A	A1S	Potri.001G350700	Potri.001G350700(AS)	POPTR_0001s34730	sp|Q2U0S9|MCD4_ASPOR	GPI ethanolamine phosphate transferase 1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=mcd4 PE=3 SV=1	AT3G01380.1	| Symbols: | transferases;sulfuric ester hydrolases;catalytics;transferases | chr3:144288-149828 REVERSE LENGTH=993	LOC_Os02g37050.1	protein|phosphatidylinositolglycan class N family protein, expressed	NA	NA	GO:0006506|GPI anchor biosynthetic process GO:0008152|metabolic process	GO:0003824|catalytic activity GO:0008484|sulfuric ester hydrolase activity GO:0016740|transferase activity	GO:0005783|endoplasmic reticulum GO:0005789|endoplasmic reticulum membrane
pt2_03576	A	A1S	Potri.001G350600	Potri.001G350600(AS)	POPTR_0001s34750	sp|Q9LFR3|GASAE_ARATH	Gibberellin-regulated protein 14 OS=Arabidopsis thaliana GN=GASA14 PE=1 SV=1	AT5G14920.1	| Symbols: | Gibberellin-regulated family protein | chr5:4826598-4827761 FORWARD LENGTH=275	LOC_Os04g39110.2	protein|GASR4 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed	IMGA|Medtr5g095990.1	Gibberellin induced protein chr5 40930558-40929229 I EGN_Mt100125 20111014	GO:0009739|response to gibberellin stimulus	GO:0005515|protein binding	NA
pt2_03577	A	A1S	Potri.001G350500	Potri.001G350500(AS)	POPTR_0001s34760	NA	NA	AT5G14910.1	| Symbols: | Heavy metal transport/detoxification superfamily protein | chr5:4823815-4825196 FORWARD LENGTH=178	LOC_Os05g27100.1	protein|expressed protein	NA	NA	GO:0006098|pentose-phosphate shunt GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0030001|metal ion transport GO:0045036|protein targeting to chloroplast	GO:0046872|metal ion binding	GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009570|chloroplast stroma GO:0009579|thylakoid GO:0009941|chloroplast envelope
pt2_03578	A	A3S	Potri.001G350400	Potri.001G350400(AS) Potri.017G073900(BS) Potri.008G117400(DS)	POPTR_0001s34770	sp|P49641|MA2A2_HUMAN	Alpha-mannosidase 2x OS=Homo sapiens GN=MAN2A2 PE=2 SV=3	AT5G14950.1	| Symbols: GMII, ATGMII | golgi alpha-mannosidase II | chr5:4837484-4841792 REVERSE LENGTH=1173	LOC_Os06g13650.2	protein|alpha-mannosidase 2, putative, expressed	NA	NA	GO:0005975|carbohydrate metabolic process GO:0006013|mannose metabolic process GO:0006486|protein glycosylation GO:0006487|protein N-linked glycosylation	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0004559|alpha-mannosidase activity GO:0008270|zinc ion binding GO:0015923|mannosidase activity GO:0030246|carbohydrate binding	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_03579	R	R	NA	NA	POPTR_0001s34780	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03580	A	A1S	Potri.001G350200	Potri.001G350200(AS)	POPTR_0001s34790	sp|Q9LFQ3|SNL2_ARATH	Paired amphipathic helix protein Sin3-like 2 OS=Arabidopsis thaliana GN=SNL2 PE=1 SV=2	AT5G15020.2	| Symbols: SNL2 | SIN3-like 2 | chr5:4859408-4865569 REVERSE LENGTH=1355	LOC_Os01g01960.1	protein|transcriptional repressor, putative, expressed	IMGA|Medtr5g036670.1	Paired amphipathic helix protein Sin3 chr5 15609363-15594913 E EGN_Mt100125 20111014	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0006355|regulation of transcription, DNA-dependent GO:0007346|regulation of mitotic cell cycle GO:0010048|vernalization response GO:0010228|vegetative to reproductive phase transition of meristem GO:0010413|glucuronoxylan metabolic process GO:0016926|protein desumoylation GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0045492|xylan biosynthetic process GO:0045892|negative regulation of transcription, DNA-dependent GO:0048440|carpel development GO:0050665|hydrogen peroxide biosynthetic process	GO:0003674|molecular_function GO:0005515|protein binding	GO:0005634|nucleus GO:0005829|cytosol
pt2_03581	C	C1S	Potri.001G350200	Potri.001G350200(CS)	sp|Q9LFQ3|SNL2_ARATH	Paired amphipathic helix protein Sin3-like 2 OS=Arabidopsis thaliana GN=SNL2 PE=1 SV=2	AT5G15020.2	| Symbols: SNL2 | SIN3-like 2 | chr5:4859408-4865569 REVERSE LENGTH=1355	LOC_Os01g01960.1	protein|transcriptional repressor, putative, expressed	IMGA|Medtr5g036670.1	Paired amphipathic helix protein Sin3 chr5 15609363-15594913 E EGN_Mt100125 20111014	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0006355|regulation of transcription, DNA-dependent GO:0007346|regulation of mitotic cell cycle GO:0010048|vernalization response GO:0010228|vegetative to reproductive phase transition of meristem GO:0010413|glucuronoxylan metabolic process GO:0016926|protein desumoylation GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0045492|xylan biosynthetic process GO:0045892|negative regulation of transcription, DNA-dependent GO:0048440|carpel development GO:0050665|hydrogen peroxide biosynthetic process	GO:0003674|molecular_function GO:0005515|protein binding	GO:0005634|nucleus GO:0005829|cytosol
pt2_03582	G	G1	NA	NA	POPTR_0001s34810	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03583	A	A1S	Potri.001G350100	Potri.001G350100(AS)	POPTR_0001s34830	NA	NA	AT3G28370.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G51430.1); Has 6174 Blast hits to 4953 proteins in 685 species: Archae - 195; Bacteria - 792; Metazoa - 2688; Fungi - 653; Plants - 470; Viruses - 15; Other Eukaryotes - 1361 (source: NCBI BLink). | chr3:10620627-10623259 FORWARD LENGTH=292	LOC_Os06g13580.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_03584	G	G3	NA	NA	POPTR_0001s34835	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03585	A	A1S	Potri.001G350000	Potri.001G350000(AS)	POPTR_0001s34840	NA	NA	AT1G19010.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G74860.1); Has 337 Blast hits to 320 proteins in 97 species: Archae - 0; Bacteria - 14; Metazoa - 153; Fungi - 26; Plants - 76; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). | chr1:6565616-6567354 FORWARD LENGTH=319	LOC_Os02g37020.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_03586	A	A2S	Potri.001G349900	Potri.001G349900(AS) Potri.017G074400(DS)	POPTR_0001s34850	sp|O04567|Y1719_ARATH	Probable inactive receptor kinase At1g27190 OS=Arabidopsis thaliana GN=At1g27190 PE=1 SV=1	AT3G28450.1	| Symbols: | Leucine-rich repeat protein kinase family protein | chr3:10667359-10669176 FORWARD LENGTH=605	LOC_Os04g41030.1	protein|inactive receptor kinase At1g27190 precursor, putative, expressed	IMGA|Medtr5g033820.1	Leucine-rich repeat receptor-like kinase chr5 14174963-14169961 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway GO:0030968|endoplasmic reticulum unfolded protein response	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane GO:0009507|chloroplast GO:0016020|membrane
pt2_03587	A	A1S	Potri.001G349800	Potri.001G349800(AS)	POPTR_0001s34860	sp|O34331|YLBH_BACSU	Putative rRNA methyltransferase ylbH OS=Bacillus subtilis (strain 168) GN=ylbH PE=3 SV=2	AT3G28460.1	| Symbols: | methyltransferases | chr3:10672673-10674297 REVERSE LENGTH=314	LOC_Os03g52640.2	protein|expressed protein	NA	NA	GO:0006364|rRNA processing GO:0006399|tRNA metabolic process GO:0009658|chloroplast organization GO:0009793|embryo development ending in seed dormancy GO:0010267|production of ta-siRNAs involved in RNA interference GO:0016226|iron-sulfur cluster assembly GO:0031167|rRNA methylation GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0042793|transcription from plastid promoter GO:0045893|positive regulation of transcription, DNA-dependent GO:0051607|defense response to virus	GO:0008168|methyltransferase activity	NA
pt2_03588	A	A1S	Potri.001G349700	Potri.001G349700(AS)	POPTR_0001s34870	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process GO:0046685|response to arsenic-containing substance	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03589	A	A1S	Potri.001G349600	Potri.001G349600(AS)	POPTR_0001s34880	sp|Q500U8|TKPR1_ARATH	Tetraketide alpha-pyrone reductase 1 OS=Arabidopsis thaliana GN=TKPR1 PE=2 SV=1	AT5G14700.1	| Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr5:4740502-4743327 REVERSE LENGTH=368	LOC_Os01g45200.1	protein|cinnamoyl-CoA reductase-related, putative, expressed	IMGA|Medtr5g029990.1	Dihydroflavonol-4-reductase chr5 12359202-12361970 F EGN_Mt100125 20111014	GO:0009809|lignin biosynthetic process GO:0044237|cellular metabolic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0016621|cinnamoyl-CoA reductase activity GO:0050662|coenzyme binding	GO:0005575|cellular_component
pt2_03590	A	A1S	Potri.001G349500	Potri.001G349500(AS)	POPTR_0001s34890	sp|Q2NKS3|PSMG3_BOVIN	Proteasome assembly chaperone 3 OS=Bos taurus GN=PSMG3 PE=2 SV=1	AT5G14710.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Proteasome assembly chaperone 3 (InterPro:IPR018788); Has 120 Blast hits to 120 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 62; Fungi - 2; Plants - 49; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). | chr5:4746465-4747776 FORWARD LENGTH=124	LOC_Os10g25600.1	protein|expressed protein	NA	NA	GO:0008150|biological_process GO:0009062|fatty acid catabolic process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03591	A	A1S	Potri.001G349500	Potri.001G349500(AS)	POPTR_0001s34890	sp|Q2NKS3|PSMG3_BOVIN	Proteasome assembly chaperone 3 OS=Bos taurus GN=PSMG3 PE=2 SV=1	AT5G14710.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Proteasome assembly chaperone 3 (InterPro:IPR018788); Has 120 Blast hits to 120 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 62; Fungi - 2; Plants - 49; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). | chr5:4746465-4747776 FORWARD LENGTH=124	LOC_Os10g25600.1	protein|expressed protein	NA	NA	GO:0008150|biological_process GO:0009062|fatty acid catabolic process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03592	A	A1S	Potri.001G349500	Potri.001G349500(AS)	POPTR_0001s34890	sp|Q2NKS3|PSMG3_BOVIN	Proteasome assembly chaperone 3 OS=Bos taurus GN=PSMG3 PE=2 SV=1	AT5G14710.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Proteasome assembly chaperone 3 (InterPro:IPR018788); Has 120 Blast hits to 120 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 62; Fungi - 2; Plants - 49; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). | chr5:4746465-4747776 FORWARD LENGTH=124	LOC_Os10g25600.1	protein|expressed protein	NA	NA	GO:0008150|biological_process GO:0009062|fatty acid catabolic process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03593	A	A1S	Potri.001G349400	Potri.001G349400(AS)	POPTR_0001s34900	sp|Q52JK6|VIP2_NICBE	Probable NOT transcription complex subunit VIP2 (Fragment) OS=Nicotiana benthamiana GN=VIP2 PE=1 SV=1	AT1G07705.2	| Symbols: | NOT2 / NOT3 / NOT5 family | chr1:2382090-2385856 FORWARD LENGTH=614	LOC_Os02g54120.4	protein|CCR4-NOT transcription factor, putative, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0015074|DNA integration GO:0045892|negative regulation of transcription, DNA-dependent	GO:0005515|protein binding	GO:0005634|nucleus GO:0009507|chloroplast
pt2_03594	A	A1S	Potri.001G349400	Potri.001G349400(AS)	POPTR_0001s34900	sp|Q52JK6|VIP2_NICBE	Probable NOT transcription complex subunit VIP2 (Fragment) OS=Nicotiana benthamiana GN=VIP2 PE=1 SV=1	AT1G07705.2	| Symbols: | NOT2 / NOT3 / NOT5 family | chr1:2382090-2385856 FORWARD LENGTH=614	LOC_Os02g54120.4	protein|CCR4-NOT transcription factor, putative, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0015074|DNA integration GO:0045892|negative regulation of transcription, DNA-dependent	GO:0005515|protein binding	GO:0005634|nucleus GO:0009507|chloroplast
pt2_03595	A	A1S	Potri.001G349400	Potri.001G349400(AS)	POPTR_0001s34900	sp|Q52JK6|VIP2_NICBE	Probable NOT transcription complex subunit VIP2 (Fragment) OS=Nicotiana benthamiana GN=VIP2 PE=1 SV=1	AT1G07705.2	| Symbols: | NOT2 / NOT3 / NOT5 family | chr1:2382090-2385856 FORWARD LENGTH=614	LOC_Os02g54120.4	protein|CCR4-NOT transcription factor, putative, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0015074|DNA integration GO:0045892|negative regulation of transcription, DNA-dependent	GO:0005515|protein binding	GO:0005634|nucleus GO:0009507|chloroplast
pt2_03596	A	A1S	Potri.001G349300	Potri.001G349300(AS)	POPTR_0001s34910	sp|Q551H4|FRAY2_DICDI	Serine/threonine-protein kinase fray2 OS=Dictyostelium discoideum GN=fray2 PE=3 SV=1	AT5G14720.1	| Symbols: | Protein kinase superfamily protein | chr5:4748212-4752642 REVERSE LENGTH=674	LOC_Os06g29120.2	protein|STE_PAK_Ste20_STLK.5 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	IMGA|Medtr5g045190.1	Serine/threonine protein kinase chr5 19408593-19396721 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_03597	G	G1	NA	NA	POPTR_0001s34915	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03598	A	A1S	Potri.001G349100	Potri.001G349100(AS)	POPTR_0001s34920	sp|Q9LK90|ALA8_ARATH	Putative phospholipid-transporting ATPase 8 OS=Arabidopsis thaliana GN=ALA8 PE=2 SV=1	AT3G27870.1	| Symbols: | ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein | chr3:10330950-10335288 FORWARD LENGTH=1189	LOC_Os06g29380.1	protein|phospholipid-transporting ATPase, putative, expressed	IMGA|Medtr5g037210.1	Phospholipid-translocating P-type ATPase flippase family protein chr5 15827138-15809797 E EGN_Mt100125 20111014	GO:0006812|cation transport GO:0008152|metabolic process GO:0015914|phospholipid transport	GO:0000166|nucleotide binding GO:0000287|magnesium ion binding GO:0003824|catalytic activity GO:0004012|phospholipid-translocating ATPase activity GO:0005524|ATP binding GO:0015662|ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism GO:0016820|hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances GO:0046872|metal ion binding	GO:0016020|membrane GO:0016021|integral to membrane
pt2_03599	C	C1A	Potri.001G349100	Potri.001G349100(CA)	sp|Q9LK90|ALA8_ARATH	Putative phospholipid-transporting ATPase 8 OS=Arabidopsis thaliana GN=ALA8 PE=2 SV=1	AT3G27870.1	| Symbols: | ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein | chr3:10330950-10335288 FORWARD LENGTH=1189	LOC_Os06g29380.1	protein|phospholipid-transporting ATPase, putative, expressed	IMGA|Medtr5g037210.1	Phospholipid-translocating P-type ATPase flippase family protein chr5 15827138-15809797 E EGN_Mt100125 20111014	GO:0006812|cation transport GO:0008152|metabolic process GO:0015914|phospholipid transport	GO:0000166|nucleotide binding GO:0000287|magnesium ion binding GO:0003824|catalytic activity GO:0004012|phospholipid-translocating ATPase activity GO:0005524|ATP binding GO:0015662|ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism GO:0016820|hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances GO:0046872|metal ion binding	GO:0016020|membrane GO:0016021|integral to membrane
pt2_03600	A	A1S	Potri.001G349000	Potri.001G349000(AS)	POPTR_0001s34940	sp|F4J117|LSF1_ARATH	Phosphoglucan phosphatase LSF1, chloroplastic OS=Arabidopsis thaliana GN=LSF1 PE=1 SV=1	AT3G01510.1	| Symbols: LSF1 | like SEX4 1 | chr3:198855-201682 REVERSE LENGTH=591	LOC_Os08g29160.1	protein|5-AMP-activated protein kinase beta-1 subunit-related, putative, expressed	NA	NA	GO:0000023|maltose metabolic process GO:0005983|starch catabolic process GO:0006470|protein dephosphorylation GO:0019252|starch biosynthetic process GO:0043085|positive regulation of catalytic activity	GO:0008138|protein tyrosine/serine/threonine phosphatase activity	GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0043036|starch grain
pt2_03601	A	A1S	Potri.001G348900	Potri.001G348900(AS)	POPTR_0001s34950	sp|P27140|CAHC_ARATH	Carbonic anhydrase, chloroplastic OS=Arabidopsis thaliana GN=CA1 PE=1 SV=2	AT3G01500.2	| Symbols: CA1 | carbonic anhydrase 1 | chr3:194853-197873 REVERSE LENGTH=347	LOC_Os01g45274.4	protein|carbonic anhydrase, chloroplast precursor, putative, expressed	IMGA|Medtr5g034250.1	Carbonic anhydrase chr5 14395664-14403152 F EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0002831|regulation of response to biotic stimulus GO:0006098|pentose-phosphate shunt GO:0006612|protein targeting to membrane GO:0009409|response to cold GO:0009595|detection of biotic stimulus GO:0009697|salicylic acid biosynthetic process GO:0009814|defense response, incompatible interaction GO:0009817|defense response to fungus, incompatible interaction GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010037|response to carbon dioxide GO:0010119|regulation of stomatal movement GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0015976|carbon utilization GO:0019684|photosynthesis, light reaction GO:0031348|negative regulation of defense response GO:0042742|defense response to bacterium GO:0043900|regulation of multi-organism process GO:0050832|defense response to fungus	GO:0004089|carbonate dehydratase activity GO:0008270|zinc ion binding	GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009570|chloroplast stroma GO:0009579|thylakoid GO:0009941|chloroplast envelope GO:0010319|stromule GO:0016020|membrane GO:0048046|apoplast
pt2_03602	G	G1	NA	NA	POPTR_0001s34953	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03603	R	R	NA	NA	POPTR_0001s34956	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03604	A	A1S	Potri.001G348800	Potri.001G348800(AS)	POPTR_0001s34960	sp|O22609|DEGP1_ARATH	Protease Do-like 1, chloroplastic OS=Arabidopsis thaliana GN=DEGP1 PE=1 SV=2	AT3G27925.1	| Symbols: DEGP1, Deg1 | DegP protease 1 | chr3:10366659-10368864 REVERSE LENGTH=439	LOC_Os05g49380.1	protein|OsDegp9 - Putative Deg protease homologue, expressed	NA	NA	GO:0006098|pentose-phosphate shunt GO:0006508|proteolysis GO:0010206|photosystem II repair GO:0010304|PSII associated light-harvesting complex II catabolic process GO:0015996|chlorophyll catabolic process GO:0019761|glucosinolate biosynthetic process GO:0030163|protein catabolic process	GO:0003824|catalytic activity GO:0004252|serine-type endopeptidase activity GO:0008236|serine-type peptidase activity	GO:0005634|nucleus GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009543|chloroplast thylakoid lumen GO:0009579|thylakoid GO:0031977|thylakoid lumen
pt2_03605	A	A1S	Potri.001G348700	Potri.001G348700(AS)	POPTR_0001s34970	NA	NA	AT3G27930.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 35 Blast hits to 35 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:10369593-10372318 REVERSE LENGTH=425	LOC_Os05g50200.2	protein|expressed protein	NA	NA	GO:0006499|N-terminal protein myristoylation	GO:0003674|molecular_function	GO:0005634|nucleus GO:0031307|integral to mitochondrial outer membrane
pt2_03606	A	A1S	Potri.001G348600	Potri.001G348600(AS)	POPTR_0001s34980	sp|Q8XWM7|NADB1_RALSO	L-aspartate oxidase 1 OS=Ralstonia solanacearum (strain GMI1000) GN=nadB1 PE=3 SV=1	AT5G14760.1	| Symbols: AO | L-aspartate oxidase | chr5:4769133-4772012 FORWARD LENGTH=651	LOC_Os02g04170.2	protein|L-aspartate oxidase 1, putative, expressed	IMGA|Medtr5g020050.1	Succinate dehydrogenase chr5 7379422-7386907 F EGN_Mt100125 20111014	GO:0009435|NAD biosynthetic process GO:0055114|oxidation-reduction process	GO:0008734|L-aspartate oxidase activity GO:0009055|electron carrier activity GO:0016491|oxidoreductase activity	GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_03607	A	A1S	Potri.001G348500	Potri.001G348500(AS)	POPTR_0001s34990	NA	NA	AT5G14540.1	| Symbols: | Protein of unknown function (DUF1421) | chr5:4687333-4689624 REVERSE LENGTH=547	LOC_Os05g07730.1	protein|retrotransposon protein, putative, unclassified, expressed	IMGA|contig_167695_1.1	BAH-PHD domain-containing protein contig_167695 4289-95 E PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03608	C	C1S	Potri.001G348500	Potri.001G348500(CS)	NA	NA	AT5G14540.1	| Symbols: | Protein of unknown function (DUF1421) | chr5:4687333-4689624 REVERSE LENGTH=547	LOC_Os05g07730.1	protein|retrotransposon protein, putative, unclassified, expressed	IMGA|contig_167695_1.1	BAH-PHD domain-containing protein contig_167695 4289-95 E PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03609	A	A1S	Potri.001G348400	Potri.001G348400(AS)	POPTR_0001s35010	NA	NA	AT5G14550.1	| Symbols: | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein | chr5:4691321-4693732 REVERSE LENGTH=377	LOC_Os05g07790.1	protein|DNA binding protein, putative, expressed	IMGA|Medtr5g055480.1	hypothetical protein chr5 22301699-22299299 E EGN_Mt100125 20111014	GO:0007623|circadian rhythm	GO:0016757|transferase activity, transferring glycosyl groups	GO:0005739|mitochondrion GO:0016020|membrane
pt2_03610	A	A1S	Potri.001G348300	Potri.001G348300(AS)	POPTR_0001s35030	sp|Q9LYK2|NRT27_ARATH	High affinity nitrate transporter 2.7 OS=Arabidopsis thaliana GN=NRT2.7 PE=2 SV=1	AT5G14570.1	| Symbols: ATNRT2.7, NRT2.7 | high affinity nitrate transporter 2.7 | chr5:4695331-4696890 REVERSE LENGTH=493	LOC_Os01g50820.1	protein|transporter, major facilitator family, putative, expressed	NA	NA	GO:0015706|nitrate transport GO:0055085|transmembrane transport	GO:0015112|nitrate transmembrane transporter activity	GO:0005886|plasma membrane GO:0009705|plant-type vacuole membrane GO:0016021|integral to membrane
pt2_03611	G	G1	NA	NA	POPTR_0001s35040	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03612	A	A1S	Potri.001G348100	Potri.001G348100(AS)	POPTR_0001s35050	sp|Q9ZVX4|U90A1_ARATH	UDP-glycosyltransferase 90A1 OS=Arabidopsis thaliana GN=UGT90A1 PE=2 SV=1	AT2G16890.2	| Symbols: | UDP-Glycosyltransferase superfamily protein | chr2:7316938-7319022 FORWARD LENGTH=478	LOC_Os09g16030.1	protein|cytokinin-O-glucosyltransferase 1, putative, expressed	IMGA|Medtr5g045960.1	Cytokinin-O-glucosyltransferase chr5 19738689-19740173 H EGN_Mt100125 20111014	GO:0008152|metabolic process	GO:0008194|UDP-glycosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups	GO:0009507|chloroplast
pt2_03613	A	A1S	Potri.001G348000	Potri.001G348000(AS)	POPTR_0001s35060	sp|Q9FNE1|CRK42_ARATH	Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana GN=CRK42 PE=2 SV=1	AT5G40380.1	| Symbols: CRK42 | cysteine-rich RLK (RECEPTOR-like protein kinase) 42 | chr5:16152121-16155038 FORWARD LENGTH=651	LOC_Os01g36790.1	protein|TKL_IRAK_DUF26-lf.2 - DUF26 kinases have homology to DUF26 containing loci, expressed	IMGA|Medtr5g033690.1	Cysteine-rich receptor-like protein kinase chr5 14100663-14103784 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	NA
pt2_03614	A	A1S	Potri.001G347900	Potri.001G347900(AS)	POPTR_0001s35070	sp|B3DZ86|PNP_METI4	Polyribonucleotide nucleotidyltransferase OS=Methylacidiphilum infernorum (isolate V4) GN=pnp PE=3 SV=2	AT5G14580.1	| Symbols: | polyribonucleotide nucleotidyltransferase, putative | chr5:4697612-4703013 REVERSE LENGTH=991	LOC_Os02g40460.1	protein|S1 RNA binding domain containing protein, expressed	NA	NA	GO:0000957|mitochondrial RNA catabolic process GO:0000963|mitochondrial RNA processing GO:0042991|transcription factor import into nucleus	GO:0000175|3'-5'-exoribonuclease activity GO:0003676|nucleic acid binding GO:0003723|RNA binding GO:0004654|polyribonucleotide nucleotidyltransferase activity	GO:0005739|mitochondrion
pt2_03615	A	A1S	Potri.001G347800	Potri.001G347800(AS)	POPTR_0001s35080	sp|P50218|IDHC_TOBAC	Isocitrate dehydrogenase [NADP] OS=Nicotiana tabacum PE=2 SV=1	AT5G14590.1	| Symbols: | Isocitrate/isopropylmalate dehydrogenase family protein | chr5:4703533-4706627 REVERSE LENGTH=485	LOC_Os04g42920.1	protein|dehydrogenase, putative, expressed	IMGA|Medtr5g077070.1	Isocitrate dehydrogenase chr5 31876118-31881010 F EGN_Mt100125 20111014	GO:0006102|isocitrate metabolic process GO:0008152|metabolic process GO:0055114|oxidation-reduction process	GO:0000287|magnesium ion binding GO:0004450|isocitrate dehydrogenase (NADP+) activity GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0051287|NAD binding	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009570|chloroplast stroma
pt2_03616	A	A1S	Potri.001G347700	Potri.001G347700(AS)	POPTR_0001s35090	sp|P55143|GLRX_RICCO	Glutaredoxin OS=Ricinus communis PE=3 SV=1	AT5G40370.1	| Symbols: | Glutaredoxin family protein | chr5:16147826-16149052 REVERSE LENGTH=111	LOC_Os04g42930.1	protein|OsGrx_C2.2 - glutaredoxin subgroup I, expressed	IMGA|Medtr5g021090.1	Glutaredoxin C3 chr5 7831449-7834001 F EGN_Mt100125 20111014	GO:0045454|cell redox homeostasis	GO:0008794|arsenate reductase (glutaredoxin) activity GO:0009055|electron carrier activity GO:0015035|protein disulfide oxidoreductase activity	GO:0005737|cytoplasm GO:0005773|vacuole GO:0005794|Golgi apparatus GO:0005829|cytosol GO:0005886|plasma membrane GO:0048046|apoplast
pt2_03617	A	A1S	Potri.001G347600	Potri.001G347600(AS)	POPTR_0001s35100	sp|Q2JW78|DNAJ_SYNJA	Chaperone protein DnaJ OS=Synechococcus sp. (strain JA-3-3Ab) GN=dnaJ PE=3 SV=1	AT5G23240.1	| Symbols: | DNAJ heat shock N-terminal domain-containing protein | chr5:7826857-7828534 REVERSE LENGTH=465	LOC_Os06g28050.3	protein|expressed protein	IMGA|Medtr1g038430.1	Chaperone protein dnaJ chr1 10098245-10101428 F EGN_Mt100125 20111014	GO:0006457|protein folding	GO:0031072|heat shock protein binding GO:0051082|unfolded protein binding	GO:0009507|chloroplast
pt2_03618	A	A1S	Potri.001G347500	Potri.001G347500(AS)	POPTR_0001s35110	sp|Q9C889|PR1F2_ARATH	PRA1 family protein F2 OS=Arabidopsis thaliana GN=PRA1F2 PE=1 SV=1	AT1G55190.1	| Symbols: PRA1.F2, PRA7 | PRA1 (Prenylated rab acceptor) family protein | chr1:20588450-20589019 FORWARD LENGTH=189	LOC_Os05g11120.1	protein|prenylated rab acceptor, putative, expressed	NA	NA	GO:0016192|vesicle-mediated transport	NA	GO:0005774|vacuolar membrane GO:0005783|endoplasmic reticulum GO:0005794|Golgi apparatus GO:0009507|chloroplast
pt2_03619	A	A1S	Potri.001G347400	Potri.001G347400(AS)	POPTR_0001s35120	NA	NA	AT3G27770.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62960.1); Has 158 Blast hits to 157 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). | chr3:10285818-10287474 REVERSE LENGTH=315	LOC_Os01g07700.2	protein|expressed protein	IMGA|Medtr5g033940.1	hypothetical protein chr5 14249410-14243247 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_03620	A	A1S	Potri.001G347300	Potri.001G347300(AS)	POPTR_0001s35130	sp|Q8H0T6|PPT2_ARATH	Phosphoenolpyruvate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana GN=PPT2 PE=2 SV=1	AT3G01550.1	| Symbols: ATPPT2, PPT2 | phosphoenolpyruvate (pep)/phosphate translocator 2 | chr3:216947-218856 REVERSE LENGTH=383	LOC_Os08g25624.1	protein|phosphate/phosphate translocator, putative, expressed	IMGA|Medtr5g044220.1	Triose phosphate/phosphate translocator chr5 19022441-19026071 H EGN_Mt100125 20111014	GO:0006810|transport GO:0006863|purine nucleobase transport GO:0009718|anthocyanin-containing compound biosynthetic process GO:0015713|phosphoglycerate transport GO:0015714|phosphoenolpyruvate transport	GO:0005215|transporter activity GO:0015120|phosphoglycerate transmembrane transporter activity GO:0015121|phosphoenolpyruvate:phosphate antiporter activity GO:0015297|antiporter activity	GO:0009507|chloroplast GO:0016020|membrane GO:0016021|integral to membrane
pt2_03621	A	A1S	Potri.001G347200	Potri.001G347200(AS)	POPTR_0001s35140	sp|Q9S7L2|MYB98_ARATH	Transcription factor MYB98 OS=Arabidopsis thaliana GN=MYB98 PE=2 SV=1	AT3G27785.1	| Symbols: MYB118, ATMYB118, PGA37 | myb domain protein 118 | chr3:10288767-10290712 REVERSE LENGTH=437	LOC_Os06g06740.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr5g070020.1	Myb chr5 28685196-28683043 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_03622	A	A1S	Potri.001G347100	Potri.001G347100(AS)	POPTR_0001s35150	sp|Q9LYJ9|RH46_ARATH	DEAD-box ATP-dependent RNA helicase 46 OS=Arabidopsis thaliana GN=RH46 PE=2 SV=2	AT5G14610.2	| Symbols: | DEAD box RNA helicase family protein | chr5:4711271-4714713 FORWARD LENGTH=645	LOC_Os01g07740.3	protein|DEAD-box ATP-dependent RNA helicase 14, putative, expressed	IMGA|contig_74166_1.1	ATP dependent RNA helicase contig_74166 1-4555 F PREDN 20111014	GO:0009664|plant-type cell wall organization GO:0042545|cell wall modification	GO:0003676|nucleic acid binding GO:0004386|helicase activity GO:0005524|ATP binding GO:0008026|ATP-dependent helicase activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03623	A	A1S	Potri.001G347000	Potri.001G347000(AS)	POPTR_0001s35160	sp|Q9LXE5|DRM1_ARATH	DNA (cytosine-5)-methyltransferase DRM1 OS=Arabidopsis thaliana GN=DRM1 PE=4 SV=2	AT5G15380.1	| Symbols: DRM1 | domains rearranged methylase 1 | chr5:4991347-4994826 FORWARD LENGTH=624	LOC_Os03g02010.4	protein|DNA methyltransferase protein, putative, expressed	IMGA|Medtr5g019420.1	DNA (cytosine-5)-methyltransferase DRM2 chr5 7061224-7070004 E EGN_Mt100125 20111014	GO:0006306|DNA methylation GO:0006346|methylation-dependent chromatin silencing GO:0016458|gene silencing GO:0050832|defense response to fungus GO:0051567|histone H3-K9 methylation	GO:0003677|DNA binding GO:0003886|DNA (cytosine-5-)-methyltransferase activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03624	A	A1S	Potri.001G346900	Potri.001G346900(AS)	POPTR_0001s35170	sp|Q66I84|DCC1_DANRE	Sister chromatid cohesion protein DCC1 OS=Danio rerio GN=dscc1 PE=2 SV=1	AT2G44580.1	| Symbols: | zinc ion binding | chr2:18402081-18403412 REVERSE LENGTH=386	LOC_Os05g02810.1	protein|protein binding protein, putative, expressed	NA	NA	NA	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_03625	A	A1S	Potri.001G346800	Potri.001G346800(AS)	POPTR_0001s35180	sp|Q949Z1|PGLR4_ARATH	Polygalacturonase At1g48100 OS=Arabidopsis thaliana GN=At1g48100 PE=2 SV=1	AT5G14650.1	| Symbols: | Pectin lyase-like superfamily protein | chr5:4724509-4726328 FORWARD LENGTH=435	LOC_Os01g44970.1	protein|polygalacturonase, putative, expressed	IMGA|Medtr5g034090.1	Polygalacturonase chr5 14308778-14313289 E EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0004650|polygalacturonase activity	GO:0005576|extracellular region
pt2_03626	A	A1S	Potri.001G346700	Potri.001G346700(AS)	POPTR_0001s35190	sp|Q9FUZ2|DEF1B_ARATH	Peptide deformylase 1B, chloroplastic OS=Arabidopsis thaliana GN=PDF1B PE=1 SV=2	AT5G14660.2	| Symbols: PDF1B, DEF2, ATDEF2 | peptide deformylase 1B | chr5:4727129-4728671 REVERSE LENGTH=273	LOC_Os01g45070.1	protein|peptide deformylase, putative, expressed	IMGA|contig_59246_1.1	Peptide deformylase 1B contig_59246 2144-737 H PREDN 20111014	GO:0006412|translation GO:0010027|thylakoid membrane organization GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway	GO:0005506|iron ion binding GO:0042586|peptide deformylase activity	GO:0009507|chloroplast
pt2_03627	A	A1S	Potri.001G346700	Potri.001G346700(AS)	POPTR_0001s35190	sp|Q9FUZ2|DEF1B_ARATH	Peptide deformylase 1B, chloroplastic OS=Arabidopsis thaliana GN=PDF1B PE=1 SV=2	AT5G14660.2	| Symbols: PDF1B, DEF2, ATDEF2 | peptide deformylase 1B | chr5:4727129-4728671 REVERSE LENGTH=273	LOC_Os01g45070.1	protein|peptide deformylase, putative, expressed	IMGA|contig_59246_1.1	Peptide deformylase 1B contig_59246 2144-737 H PREDN 20111014	GO:0006412|translation GO:0010027|thylakoid membrane organization GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway	GO:0005506|iron ion binding GO:0042586|peptide deformylase activity	GO:0009507|chloroplast
pt2_03628	A	A1S	Potri.001G346700	Potri.001G346700(AS)	POPTR_0001s35190	sp|Q9FUZ2|DEF1B_ARATH	Peptide deformylase 1B, chloroplastic OS=Arabidopsis thaliana GN=PDF1B PE=1 SV=2	AT5G14660.2	| Symbols: PDF1B, DEF2, ATDEF2 | peptide deformylase 1B | chr5:4727129-4728671 REVERSE LENGTH=273	LOC_Os01g45070.1	protein|peptide deformylase, putative, expressed	IMGA|contig_59246_1.1	Peptide deformylase 1B contig_59246 2144-737 H PREDN 20111014	GO:0006412|translation GO:0010027|thylakoid membrane organization GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway	GO:0005506|iron ion binding GO:0042586|peptide deformylase activity	GO:0009507|chloroplast
pt2_03629	A	A1S	Potri.001G346600	Potri.001G346600(AS)	POPTR_0001s35200	sp|P81391|MYB05_ANTMA	Myb-related protein 305 OS=Antirrhinum majus GN=MYB305 PE=2 SV=1	AT3G27810.1	| Symbols: ATMYB21, ATMYB3, MYB21 | myb domain protein 21 | chr3:10307596-10310093 FORWARD LENGTH=226	LOC_Os03g20090.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr1g086510.1	Myb-like transcription factor chr1 23058938-23060452 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009740|gibberellic acid mediated signaling pathway GO:0009753|response to jasmonic acid stimulus GO:0009867|jasmonic acid mediated signaling pathway GO:0048441|petal development GO:0048443|stamen development GO:0048481|ovule development GO:0080086|stamen filament development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_03630	A	A1S	Potri.001G346500	Potri.001G346500(AS)	POPTR_0001s35210	sp|O64556|Y2923_ARATH	Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g19230 OS=Arabidopsis thaliana GN=At2g19230 PE=2 SV=3	AT4G29990.1	| Symbols: | Leucine-rich repeat transmembrane protein kinase protein | chr4:14665802-14669438 REVERSE LENGTH=876	LOC_Os05g44940.1	protein|protein kinase domain containing protein, expressed	IMGA|Medtr5g058090.1	Receptor-like protein kinase chr5 23323996-23335232 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006857|oligopeptide transport	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_03631	A	A1S	Potri.001G346200	Potri.001G346200(AS)	POPTR_0001s35220	sp|Q9LK94|MDAR2_ARATH	Probable monodehydroascorbate reductase, cytoplasmic isoform 2 OS=Arabidopsis thaliana GN=At3g27820 PE=2 SV=1	AT3G27820.1	| Symbols: ATMDAR4, MDAR4 | monodehydroascorbate reductase 4 | chr3:10315249-10317881 FORWARD LENGTH=488	LOC_Os02g47800.1	protein|monodehydroascorbate reductase, putative, expressed	IMGA|contig_53972_1.1	Monodehydroascorbate reductase contig_53972 3297-41 F PREDN 20111014	GO:0019761|glucosinolate biosynthetic process GO:0042744|hydrogen peroxide catabolic process GO:0046686|response to cadmium ion GO:0055114|oxidation-reduction process	GO:0009055|electron carrier activity GO:0016491|oxidoreductase activity GO:0016656|monodehydroascorbate reductase (NADH) activity GO:0050660|flavin adenine dinucleotide binding	GO:0005737|cytoplasm GO:0005778|peroxisomal membrane GO:0009941|chloroplast envelope
pt2_03632	A	A1S	Potri.001G346100	Potri.001G346100(AS)	POPTR_0001s35230	sp|P36210|RK121_ARATH	50S ribosomal protein L12-1, chloroplastic OS=Arabidopsis thaliana GN=RPL12A PE=1 SV=1	AT3G27830.1	| Symbols: RPL12-A, RPL12 | ribosomal protein L12-A | chr3:10318576-10319151 FORWARD LENGTH=191	LOC_Os01g47330.1	protein|ribosomal protein L7/L12 C-terminal domain containing protein, expressed	NA	NA	GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0000311|plastid large ribosomal subunit GO:0005622|intracellular GO:0005840|ribosome GO:0009295|nucleoid GO:0009506|plasmodesma GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009570|chloroplast stroma GO:0009579|thylakoid GO:0009941|chloroplast envelope GO:0015934|large ribosomal subunit
pt2_03633	A	A1S	Potri.001G346000	Potri.001G346000(AS)	POPTR_0001s35240	NA	NA	AT3G27670.1	| Symbols: RST1 | ARM repeat superfamily protein | chr3:10245338-10253158 FORWARD LENGTH=1841	LOC_Os01g07490.1	protein|RST1, putative, expressed	NA	NA	GO:0006486|protein glycosylation GO:0006723|cuticle hydrocarbon biosynthetic process GO:0007062|sister chromatid cohesion GO:0009640|photomorphogenesis GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009880|embryonic pattern specification GO:0009909|regulation of flower development GO:0009933|meristem structural organization GO:0010072|primary shoot apical meristem specification GO:0010162|seed dormancy process GO:0010182|sugar mediated signaling pathway GO:0010228|vegetative to reproductive phase transition of meristem GO:0010413|glucuronoxylan metabolic process GO:0010431|seed maturation GO:0010564|regulation of cell cycle process GO:0016567|protein ubiquitination GO:0019915|lipid storage GO:0045492|xylan biosynthetic process GO:0045595|regulation of cell differentiation GO:0048366|leaf development GO:0048825|cotyledon development GO:0050826|response to freezing	NA	GO:0009507|chloroplast
pt2_03634	A	A1S	Potri.001G346000	Potri.001G346000(AS)	POPTR_0001s35240	NA	NA	AT3G27670.1	| Symbols: RST1 | ARM repeat superfamily protein | chr3:10245338-10253158 FORWARD LENGTH=1841	LOC_Os01g07490.1	protein|RST1, putative, expressed	NA	NA	GO:0006486|protein glycosylation GO:0006723|cuticle hydrocarbon biosynthetic process GO:0007062|sister chromatid cohesion GO:0009640|photomorphogenesis GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009880|embryonic pattern specification GO:0009909|regulation of flower development GO:0009933|meristem structural organization GO:0010072|primary shoot apical meristem specification GO:0010162|seed dormancy process GO:0010182|sugar mediated signaling pathway GO:0010228|vegetative to reproductive phase transition of meristem GO:0010413|glucuronoxylan metabolic process GO:0010431|seed maturation GO:0010564|regulation of cell cycle process GO:0016567|protein ubiquitination GO:0019915|lipid storage GO:0045492|xylan biosynthetic process GO:0045595|regulation of cell differentiation GO:0048366|leaf development GO:0048825|cotyledon development GO:0050826|response to freezing	NA	GO:0009507|chloroplast
pt2_03635	A	A1S	Potri.001G346000	Potri.001G346000(AS)	POPTR_0001s35240	NA	NA	AT3G27670.1	| Symbols: RST1 | ARM repeat superfamily protein | chr3:10245338-10253158 FORWARD LENGTH=1841	LOC_Os01g07490.1	protein|RST1, putative, expressed	NA	NA	GO:0006486|protein glycosylation GO:0006723|cuticle hydrocarbon biosynthetic process GO:0007062|sister chromatid cohesion GO:0009640|photomorphogenesis GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009880|embryonic pattern specification GO:0009909|regulation of flower development GO:0009933|meristem structural organization GO:0010072|primary shoot apical meristem specification GO:0010162|seed dormancy process GO:0010182|sugar mediated signaling pathway GO:0010228|vegetative to reproductive phase transition of meristem GO:0010413|glucuronoxylan metabolic process GO:0010431|seed maturation GO:0010564|regulation of cell cycle process GO:0016567|protein ubiquitination GO:0019915|lipid storage GO:0045492|xylan biosynthetic process GO:0045595|regulation of cell differentiation GO:0048366|leaf development GO:0048825|cotyledon development GO:0050826|response to freezing	NA	GO:0009507|chloroplast
pt2_03636	A	A1S	Potri.001G345900	Potri.001G345900(AS)	POPTR_0001s35260	sp|Q6NV31|WDR82_DANRE	WD repeat-containing protein 82 OS=Danio rerio GN=wdr82 PE=2 SV=1	AT5G14530.1	| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr5:4684782-4686865 REVERSE LENGTH=330	LOC_Os05g46570.1	protein|WD domain, G-beta repeat domain containing protein, expressed	NA	NA	GO:0008150|biological_process GO:0048573|photoperiodism, flowering	GO:0000166|nucleotide binding	GO:0005737|cytoplasm GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_03637	A	A1S	Potri.001G345800	Potri.001G345800(AS)	POPTR_0001s35270	sp|P29527|OLEO6_GOSHI	Oleosin 18.2 kDa OS=Gossypium hirsutum GN=MATP6-A PE=2 SV=1	AT3G01570.1	| Symbols: | Oleosin family protein | chr3:222152-222778 REVERSE LENGTH=183	LOC_Os03g49190.1	protein|oleosin, putative, expressed	IMGA|Medtr5g035040.1	Oleosin chr5 14822498-14819393 E EGN_Mt100125 20111014	GO:0009845|seed germination GO:0019915|lipid storage GO:0050826|response to freezing	GO:0003674|molecular_function	GO:0012511|monolayer-surrounded lipid storage body GO:0016020|membrane GO:0016021|integral to membrane
pt2_03638	A	A1S	Potri.001G345700	Potri.001G345700(AS)	POPTR_0001s35280	sp|Q8L8Q3|LBD25_ARATH	LOB domain-containing protein 25 OS=Arabidopsis thaliana GN=LBD25 PE=2 SV=3	AT3G27650.1	| Symbols: LBD25 | LOB domain-containing protein 25 | chr3:10238731-10240346 FORWARD LENGTH=159	LOC_Os01g07480.1	protein|DUF260 domain containing protein, putative, expressed	IMGA|contig_68231_1.1	LOB domain protein contig_68231 296-982 H PREDN 20111014	GO:0010199|organ boundary specification between lateral organs and the meristem	NA	GO:0005634|nucleus
pt2_03639	A	A1S	Potri.001G345600	Potri.001G345600(AS)	POPTR_0001s35285	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03640	A	A1S	Potri.001G345500	Potri.001G345500(AS)	POPTR_0001s35290	sp|Q9FJV0|M2K6_ARATH	Mitogen-activated protein kinase kinase 6 OS=Arabidopsis thaliana GN=MKK6 PE=1 SV=1	AT5G40440.1	| Symbols: ATMKK3, MKK3 | mitogen-activated protein kinase kinase 3 | chr5:16182149-16184513 FORWARD LENGTH=520	LOC_Os06g27890.1	protein|STE_MEK_ste7_MAP2K.8 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	IMGA|contig_50443_1.1	Protein kinase contig_50443 171-4852 E PREDN 20111014	GO:0000165|MAPK cascade GO:0006468|protein phosphorylation GO:0009814|defense response, incompatible interaction GO:0009864|induced systemic resistance, jasmonic acid mediated signaling pathway GO:0009866|induced systemic resistance, ethylene mediated signaling pathway	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004707|MAP kinase activity GO:0004708|MAP kinase kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_03641	A	A1S	Potri.001G345400	Potri.001G345400(AS)	POPTR_0001s35300	sp|Q5ZJW8|DTL_CHICK	Denticleless protein homolog OS=Gallus gallus GN=DTL PE=2 SV=1	AT3G27640.1	| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr3:10232307-10235467 FORWARD LENGTH=535	LOC_Os03g49200.1	protein|WD domain, G-beta repeat domain containing protein, expressed	IMGA|Medtr5g090420.1	WD-repeat protein-like protein chr5 38334682-38338889 E EGN_Mt100125 20111014	GO:0006261|DNA-dependent DNA replication GO:0008150|biological_process	GO:0000166|nucleotide binding	GO:0005634|nucleus GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_03642	A	A1S	Potri.001G345300	Potri.001G345300(AS)	POPTR_0001s35310	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006612|protein targeting to membrane GO:0008150|biological_process GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010363|regulation of plant-type hypersensitive response	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_03643	A	A1S	Potri.001G345300	Potri.001G345300(AS)	POPTR_0001s35310	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006612|protein targeting to membrane GO:0008150|biological_process GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010363|regulation of plant-type hypersensitive response	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_03644	C	C1S	Potri.001G345300	Potri.001G345300(CS)	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006612|protein targeting to membrane GO:0008150|biological_process GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010363|regulation of plant-type hypersensitive response	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_03645	A	A1S	Potri.001G345200	Potri.001G345200(AS)	POPTR_0001s35320	sp|Q9WTK3|GPAA1_MOUSE	Glycosylphosphatidylinositol anchor attachment 1 protein OS=Mus musculus GN=Gpaa1 PE=1 SV=3	AT5G19130.1	| Symbols: | GPI transamidase component family protein / Gaa1-like family protein | chr5:6416128-6418993 REVERSE LENGTH=699	LOC_Os01g48980.1	protein|GPI transamidase component family protein, putative, expressed	NA	NA	NA	GO:0003923|GPI-anchor transamidase activity	GO:0005634|nucleus GO:0005783|endoplasmic reticulum GO:0016021|integral to membrane GO:0042765|GPI-anchor transamidase complex
pt2_03646	A	A1S	Potri.001G345100	Potri.001G345100(AS)	POPTR_0001s35330	sp|Q9QY81|PO210_MOUSE	Nuclear pore membrane glycoprotein 210 OS=Mus musculus GN=Nup210 PE=1 SV=2	AT5G40480.1	| Symbols: EMB3012 | embryo defective 3012 | chr5:16213361-16223982 FORWARD LENGTH=1923	NA	NA	NA	NA	GO:0009793|embryo development ending in seed dormancy	GO:0005515|protein binding	GO:0005634|nucleus GO:0005635|nuclear envelope GO:0005783|endoplasmic reticulum
pt2_03647	A	A1S	Potri.001G345100	Potri.001G345100(AS)	POPTR_0001s35340	sp|Q9QY81|PO210_MOUSE	Nuclear pore membrane glycoprotein 210 OS=Mus musculus GN=Nup210 PE=1 SV=2	AT5G40480.1	| Symbols: EMB3012 | embryo defective 3012 | chr5:16213361-16223982 FORWARD LENGTH=1923	NA	NA	NA	NA	GO:0009793|embryo development ending in seed dormancy	GO:0005515|protein binding	GO:0005634|nucleus GO:0005635|nuclear envelope GO:0005783|endoplasmic reticulum
pt2_03648	R	R	NA	NA	POPTR_0001s35350	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03649	A	A1S	Potri.001G344900	Potri.001G344900(AS)	POPTR_0001s35360	sp|Q9VVE5|MSIR6_DROME	RNA-binding protein Musashi homolog Rbp6 OS=Drosophila melanogaster GN=Rbp6 PE=2 SV=3	AT5G40490.1	| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr5:16225483-16227423 FORWARD LENGTH=423	LOC_Os08g23120.1	protein|RNA recognition motif containing protein, putative, expressed	IMGA|Medtr5g097580.1	Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like protein chr5 41711192-41715991 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005829|cytosol
pt2_03650	A	A1S	Potri.001G344800	Potri.001G344800(AS)	POPTR_0001s35370	NA	NA	AT3G09580.1	| Symbols: | FAD/NAD(P)-binding oxidoreductase family protein | chr3:2942614-2944047 REVERSE LENGTH=477	LOC_Os07g43370.1	protein|amine oxidase family protein, putative, expressed	NA	NA	GO:0010103|stomatal complex morphogenesis GO:0016556|mRNA modification GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity	GO:0009507|chloroplast GO:0009941|chloroplast envelope
pt2_03651	A	A1S	Potri.001G344700	Potri.001G344700(AS)	POPTR_0001s35380	NA	NA	AT5G40500.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 49 Blast hits to 49 proteins in 22 species: Archae - 0; Bacteria - 7; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:16227984-16228518 FORWARD LENGTH=114	LOC_Os04g40670.1	protein|expressed protein	NA	NA	GO:0006661|phosphatidylinositol biosynthetic process GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_03652	A	A1S	Potri.001G344600	Potri.001G344600(AS)	POPTR_0001s35390	sp|P15792|KPK1_PHAVU	Protein kinase PVPK-1 OS=Phaseolus vulgaris PE=2 SV=1	AT3G27580.2	| Symbols: ATPK7 | Protein kinase superfamily protein | chr3:10217671-10219484 REVERSE LENGTH=578	LOC_Os08g38320.2	protein|AGC_PVPK_like_kin82y.14 - ACG kinases include homologs to PKA, PKG and PKC, expressed	IMGA|contig_80576_1.1	Protein kinase contig_80576 394-3534 E PREDN 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	NA
pt2_03653	A	A2S	Potri.001G344500	Potri.001G344500(AS) Potri.006G025600(BS)	POPTR_0001s35400	NA	NA	AT2G41060.2	| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr2:17127138-17128493 FORWARD LENGTH=451	LOC_Os01g16090.1	protein|RNA binding protein, putative, expressed	IMGA|Medtr5g088220.1	Heterogeneous nuclear ribonucleoprotein D0 chr5 37214495-37212096 F EGN_Mt100125 20111014	GO:0006952|defense response GO:0008219|cell death GO:0009693|ethylene biosynthetic process GO:0009738|abscisic acid mediated signaling pathway GO:0010150|leaf senescence GO:0048255|mRNA stabilization	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding GO:0005515|protein binding GO:0017091|AU-rich element binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol
pt2_03654	B	B1S	Potri.001G344400	Potri.001G344400(BS)	POPTR_0001s35410	sp|Q6FLQ5|AIM32_CANGA	Altered inheritance of mitochondria protein 32 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=AIM32 PE=3 SV=1	AT5G40510.1	| Symbols: | Sucrase/ferredoxin-like family protein | chr5:16229277-16230798 FORWARD LENGTH=333	LOC_Os02g49320.1	protein|sucrase-related, putative, expressed	IMGA|Medtr5g096090.1	Sucrase-like protein chr5 40975452-40979612 H EGN_Mt100125 20111014	GO:0006826|iron ion transport GO:0008150|biological_process GO:0010106|cellular response to iron ion starvation GO:0010167|response to nitrate GO:0015698|inorganic anion transport GO:0015706|nitrate transport	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03655	A	A1S	Potri.001G344300	Potri.001G344300(AS)	POPTR_0001s35430	sp|A2YZ24|SWT7B_ORYSI	Bidirectional sugar transporter SWEET7b OS=Oryza sativa subsp. indica GN=SWEET7B PE=3 SV=1	AT3G28007.1	| Symbols: SWEET4, AtSWEET4 | Nodulin MtN3 family protein | chr3:10408243-10409633 REVERSE LENGTH=251	LOC_Os01g42090.1	protein|nodulin MtN3 family protein, putative, expressed	IMGA|Medtr5g067530.1	Protein RUPTURED POLLEN GRAIN chr5 27562869-27565164 E EGN_Mt100125 20111014	NA	GO:0051119|sugar transmembrane transporter activity	GO:0005886|plasma membrane GO:0005887|integral to plasma membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_03656	A	A1S	Potri.001G344200	Potri.001G344200(AS)	POPTR_0001s35440	sp|Q8GWV5|PUB3_ARATH	U-box domain-containing protein 3 OS=Arabidopsis thaliana GN=PUB3 PE=2 SV=2	AT5G14510.1	| Symbols: | ARM repeat superfamily protein | chr5:4678125-4679194 REVERSE LENGTH=327	LOC_Os01g02200.1	protein|armadillo/beta-catenin repeat family protein, putative, expressed	IMGA|Medtr5g069340.1	U-box domain-containing protein chr5 28404574-28410188 F EGN_Mt100125 20111014	GO:0008150|biological_process GO:0010014|meristem initiation GO:0010089|xylem development GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process	GO:0019894|kinesin binding	GO:0005575|cellular_component GO:0005871|kinesin complex
pt2_03657	A	A1S	Potri.001G344100	Potri.001G344100(AS)	POPTR_0001s35450	sp|Q40784|AAPC_CENCI	Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris PE=2 SV=1	AT3G01590.1	| Symbols: | Galactose mutarotase-like superfamily protein | chr3:226647-228346 FORWARD LENGTH=306	LOC_Os04g56290.5	protein|aldose 1-epimerase, putative, expressed	IMGA|Medtr5g009670.1	Apospory-associated protein C chr5 2153652-2151588 F EGN_Mt100125 20111014	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0005975|carbohydrate metabolic process GO:0006012|galactose metabolic process GO:0009086|methionine biosynthetic process	GO:0003824|catalytic activity GO:0004034|aldose 1-epimerase activity GO:0016853|isomerase activity GO:0030246|carbohydrate binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03658	A	A1S	Potri.001G344000	Potri.001G344000(AS)	POPTR_0001s35460	sp|Q84JC0|RRP8_ARATH	Ribosomal RNA-processing protein 8 OS=Arabidopsis thaliana GN=At5g40530 PE=2 SV=1	AT5G40530.1	| Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr5:16234551-16236100 FORWARD LENGTH=287	LOC_Os02g38060.1	protein|methyltransferase domain containing protein, expressed	NA	NA	NA	GO:0008168|methyltransferase activity	GO:0005634|nucleus
pt2_03659	A	A1S	Potri.001G343900	Potri.001G343900(AS)	POPTR_0001s35480	sp|Q2MHE4|HT1_ARATH	Serine/threonine-protein kinase HT1 OS=Arabidopsis thaliana GN=HT1 PE=1 SV=1	AT5G50180.1	| Symbols: | Protein kinase superfamily protein | chr5:20431116-20432883 FORWARD LENGTH=346	LOC_Os02g38080.2	protein|protein kinase domain containing protein, expressed	IMGA|Medtr5g019700.1	Serine/threonine protein kinase chr5 7209910-7214507 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0007020|microtubule nucleation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004712|protein serine/threonine/tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	NA
pt2_03660	A	A1S	Potri.001G343800	Potri.001G343800(AS)	POPTR_0001s35490	sp|Q6NQK2|NAC8_ARATH	NAC domain-containing protein 8 OS=Arabidopsis thaliana GN=NAC008 PE=2 SV=1	AT3G01600.1	| Symbols: anac044, NAC044 | NAC domain containing protein 44 | chr3:229365-231105 FORWARD LENGTH=370	LOC_Os02g38130.1	protein|no apical meristem protein, putative, expressed	IMGA|Medtr5g053430.1	NAC domain-containing protein chr5 21467310-21471637 E EGN_Mt100125 20111014	GO:0000077|DNA damage checkpoint GO:0006355|regulation of transcription, DNA-dependent GO:0007275|multicellular organismal development GO:0010332|response to gamma radiation GO:0040020|regulation of meiosis	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03661	A	A1S	Potri.001G343800	Potri.001G343800(AS)	POPTR_0001s35490	sp|Q6NQK2|NAC8_ARATH	NAC domain-containing protein 8 OS=Arabidopsis thaliana GN=NAC008 PE=2 SV=1	AT3G01600.1	| Symbols: anac044, NAC044 | NAC domain containing protein 44 | chr3:229365-231105 FORWARD LENGTH=370	LOC_Os02g38130.1	protein|no apical meristem protein, putative, expressed	IMGA|Medtr5g053430.1	NAC domain-containing protein chr5 21467310-21471637 E EGN_Mt100125 20111014	GO:0000077|DNA damage checkpoint GO:0006355|regulation of transcription, DNA-dependent GO:0007275|multicellular organismal development GO:0010332|response to gamma radiation GO:0040020|regulation of meiosis	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03662	A	A1S	Potri.001G343700	Potri.001G343700(AS)	POPTR_0001s35500	sp|Q67XL4|Y3544_ARATH	Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabidopsis thaliana GN=At3g25440 PE=2 SV=1	AT3G27550.1	| Symbols: | RNA-binding CRS1 / YhbY (CRM) domain protein | chr3:10208010-10209899 REVERSE LENGTH=491	LOC_Os05g05300.1	protein|CRS1/YhbY domain containing protein, putative, expressed	NA	NA	NA	GO:0003723|RNA binding	GO:0009507|chloroplast
pt2_03663	A	A1S	Potri.001G343600	Potri.001G343600(AS)	POPTR_0001s35510	sp|Q02527|MGAT3_RAT	Beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase OS=Rattus norvegicus GN=Mgat3 PE=1 SV=2	AT5G14480.1	| Symbols: | beta-1,4-N-acetylglucosaminyltransferase family protein | chr5:4667984-4669693 FORWARD LENGTH=387	LOC_Os04g40150.1	protein|glycosyl transferase family 17 protein, putative, expressed	NA	NA	GO:0006487|protein N-linked glycosylation	GO:0003830|beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity GO:0008375|acetylglucosaminyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups	GO:0005794|Golgi apparatus GO:0016020|membrane
pt2_03664	A	A1S	Potri.001G343500	Potri.001G343500(AS)	POPTR_0001s35520	sp|B0F9L4|GOGC6_ARATH	Golgin candidate 6 OS=Arabidopsis thaliana GN=GC6 PE=1 SV=2	AT3G27530.1	| Symbols: GC6, MAG4 | golgin candidate 6 | chr3:10193778-10199659 REVERSE LENGTH=914	LOC_Os12g35360.1	protein|vesicle tethering family protein, putative, expressed	NA	NA	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0006486|protein glycosylation GO:0006886|intracellular protein transport GO:0007033|vacuole organization GO:0009639|response to red or far red light GO:0009791|post-embryonic development GO:0032527|protein exit from endoplasmic reticulum GO:0048193|Golgi vesicle transport GO:0048280|vesicle fusion with Golgi apparatus	GO:0008565|protein transporter activity	GO:0000139|Golgi membrane GO:0005634|nucleus GO:0005737|cytoplasm GO:0005794|Golgi apparatus GO:0005795|Golgi stack GO:0005829|cytosol GO:0016020|membrane
pt2_03665	A	A1S	Potri.001G343400	Potri.001G343400(AS)	POPTR_0001s35530	sp|Q93ZC9|GLAK1_ARATH	Glucuronokinase 1 OS=Arabidopsis thaliana GN=GLCAK1 PE=1 SV=1	AT3G01640.1	| Symbols: ATGLCAK, GLCAK | glucuronokinase G | chr3:239418-241198 FORWARD LENGTH=362	LOC_Os11g11060.1	protein|GHMP kinases ATP-binding protein, putative, expressed	NA	NA	GO:0006020|inositol metabolic process GO:0008152|metabolic process GO:0048868|pollen tube development	GO:0005524|ATP binding GO:0008266|poly(U) RNA binding GO:0016301|kinase activity GO:0016773|phosphotransferase activity, alcohol group as acceptor GO:0047940|glucuronokinase activity	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_03666	A	A1S	Potri.001G343300	Potri.001G343300(AS)	POPTR_0001s35540	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03667	A	A1S	Potri.001G343200	Potri.001G343200(AS)	POPTR_0001s35550	NA	NA	AT3G27520.1	| Symbols: | unknown protein; Has 28 Blast hits to 28 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:10192484-10193159 FORWARD LENGTH=198	LOC_Os02g38180.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03668	A	A1S	Potri.001G343200	Potri.001G343200(AS)	POPTR_0001s35550	NA	NA	AT3G27520.1	| Symbols: | unknown protein; Has 28 Blast hits to 28 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:10192484-10193159 FORWARD LENGTH=198	LOC_Os02g38180.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03669	A	A1S	Potri.001G343100	Potri.001G343100(AS)	POPTR_0001s35560	sp|Q9RB36|TRUB_FLAJ1	tRNA pseudouridine synthase B OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=truB PE=3 SV=1	AT5G14460.1	| Symbols: | Pseudouridine synthase family protein | chr5:4660239-4662543 REVERSE LENGTH=540	LOC_Os05g01750.1	protein|TruB family pseudouridylate synthase, putative, expressed	NA	NA	GO:0001522|pseudouridine synthesis GO:0006396|RNA processing GO:0009451|RNA modification GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway	GO:0003723|RNA binding GO:0005215|transporter activity GO:0009982|pseudouridine synthase activity	GO:0005634|nucleus
pt2_03670	A	A1S	Potri.001G343100	Potri.001G343100(AS)	POPTR_0001s35570	sp|Q9RB36|TRUB_FLAJ1	tRNA pseudouridine synthase B OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=truB PE=3 SV=1	AT5G14460.1	| Symbols: | Pseudouridine synthase family protein | chr5:4660239-4662543 REVERSE LENGTH=540	LOC_Os05g01750.1	protein|TruB family pseudouridylate synthase, putative, expressed	NA	NA	GO:0001522|pseudouridine synthesis GO:0006396|RNA processing GO:0009451|RNA modification GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway	GO:0003723|RNA binding GO:0005215|transporter activity GO:0009982|pseudouridine synthase activity	GO:0005634|nucleus
pt2_03671	A	A1S	Potri.001G343000	Potri.001G343000(AS)	POPTR_0001s35580	sp|Q8H0M1|QORH_SPIOL	Quinone-oxidoreductase homolog, chloroplastic OS=Spinacia oleracea GN=QOR PE=1 SV=1	AT4G13010.1	| Symbols: | Oxidoreductase, zinc-binding dehydrogenase family protein | chr4:7600682-7602567 FORWARD LENGTH=329	LOC_Os04g30420.1	protein|dehydrogenase, putative, expressed	IMGA|AC225458_92.1	Quinone oxidoreductase-like protein AC225458.11 328100-329713 H EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0008270|zinc ion binding GO:0016491|oxidoreductase activity	GO:0005737|cytoplasm GO:0005773|vacuole GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009941|chloroplast envelope
pt2_03672	A	A1S	Potri.001G342900	Potri.001G342900(AS)	POPTR_0001s35590	sp|Q8H0M1|QORH_SPIOL	Quinone-oxidoreductase homolog, chloroplastic OS=Spinacia oleracea GN=QOR PE=1 SV=1	AT4G13010.1	| Symbols: | Oxidoreductase, zinc-binding dehydrogenase family protein | chr4:7600682-7602567 FORWARD LENGTH=329	LOC_Os04g30420.1	protein|dehydrogenase, putative, expressed	IMGA|AC225458_92.1	Quinone oxidoreductase-like protein AC225458.11 328100-329713 H EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0008270|zinc ion binding GO:0016491|oxidoreductase activity	GO:0005737|cytoplasm GO:0005773|vacuole GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009941|chloroplast envelope
pt2_03673	A	A1S	Potri.001G342800	Potri.001G342800(AS)	POPTR_0001s35600	sp|Q9SV68|QORH_ARATH	Putative quinone-oxidoreductase homolog, chloroplastic OS=Arabidopsis thaliana GN=At4g13010 PE=2 SV=1	AT4G13010.1	| Symbols: | Oxidoreductase, zinc-binding dehydrogenase family protein | chr4:7600682-7602567 FORWARD LENGTH=329	LOC_Os04g30420.1	protein|dehydrogenase, putative, expressed	IMGA|AC225458_92.1	Quinone oxidoreductase-like protein AC225458.11 328100-329713 H EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0008270|zinc ion binding GO:0016491|oxidoreductase activity	GO:0005737|cytoplasm GO:0005773|vacuole GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009941|chloroplast envelope
pt2_03674	A	A1S	Potri.001G342700	Potri.001G342700(AS)	POPTR_0001s35610	NA	NA	AT3G27460.1	| Symbols: | SGF29 tudor-like domain | chr3:10159537-10161994 REVERSE LENGTH=270	LOC_Os12g19350.1	protein|expressed protein	NA	NA	GO:0009651|response to salt stress	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_03675	A	A1S	Potri.001G342600	Potri.001G342600(AS)	POPTR_0001s35620	sp|Q9LY84|GDL76_ARATH	GDSL esterase/lipase At5g14450 OS=Arabidopsis thaliana GN=At5g14450 PE=2 SV=1	AT5G14450.1	| Symbols: | GDSL-like Lipase/Acylhydrolase superfamily protein | chr5:4658488-4660034 FORWARD LENGTH=389	LOC_Os07g39740.1	protein|GDSL-like lipase/acylhydrolase, putative, expressed	IMGA|Medtr1g030220.1	Early nodulin chr1 8769562-8773292 E EGN_Mt100125 20111014	GO:0006629|lipid metabolic process	GO:0004091|carboxylesterase activity GO:0016788|hydrolase activity, acting on ester bonds	GO:0005576|extracellular region GO:0009505|plant-type cell wall GO:0009506|plasmodesma
pt2_03676	A	A1S	Potri.001G342500	Potri.001G342500(AS)	POPTR_0001s35630	sp|P51419|RL273_ARATH	60S ribosomal protein L27-3 OS=Arabidopsis thaliana GN=RPL27C PE=2 SV=2	AT4G15000.1	| Symbols: | Ribosomal L27e protein family | chr4:8571896-8572303 FORWARD LENGTH=135	LOC_Os10g41470.1	protein|60S ribosomal protein L27-3, putative, expressed	NA	NA	GO:0001510|RNA methylation GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005737|cytoplasm GO:0005840|ribosome GO:0022625|cytosolic large ribosomal subunit GO:0022626|cytosolic ribosome
pt2_03677	B	B1S	Potri.001G342400	Potri.001G342400(BS)	POPTR_0001s35640	NA	NA	AT5G40570.1	| Symbols: | Surfeit locus protein 2 (SURF2) | chr5:16246798-16248251 FORWARD LENGTH=204	LOC_Os04g40430.1	protein|surfeit locus protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03678	A	A1S	Potri.001G342300	Potri.001G342300(AS)	POPTR_0001s35650	sp|Q8VZV7|PMT9_ARATH	Probable methyltransferase PMT9 OS=Arabidopsis thaliana GN=At5g14430 PE=1 SV=1	AT5G14430.1	| Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr5:4653092-4655741 FORWARD LENGTH=612	LOC_Os06g47294.1	protein|methyltransferase, putative, expressed	IMGA|Medtr1g075900.1	Methyltransferase chr1 19382853-19380393 E EGN_Mt100125 20111014	NA	GO:0008168|methyltransferase activity	GO:0005768|endosome GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0009505|plant-type cell wall
pt2_03679	A	A1S	Potri.001G342200	Potri.001G342200(AS)	POPTR_0001s35660	sp|Q9LY87|RGLG2_ARATH	E3 ubiquitin-protein ligase RGLG2 OS=Arabidopsis thaliana GN=RGLG2 PE=1 SV=1	AT5G14420.2	| Symbols: RGLG2 | RING domain ligase2 | chr5:4648355-4650563 REVERSE LENGTH=468	LOC_Os01g68060.1	protein|copine, putative, expressed	IMGA|contig_60337_1.1	Copine I-like protein contig_60337 5168-642 F PREDN 20111014	GO:0006499|N-terminal protein myristoylation GO:0009690|cytokinin metabolic process GO:0009850|auxin metabolic process GO:0080148|negative regulation of response to water deprivation	GO:0004842|ubiquitin-protein ligase activity GO:0008270|zinc ion binding	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_03680	A	A1S	Potri.001G342100	Potri.001G342100(AS)	POPTR_0001s35670	NA	NA	AT5G14410.1	| Symbols: | unknown protein; Has 23 Blast hits to 23 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:4646897-4647398 REVERSE LENGTH=133	NA	NA	NA	NA	GO:0006661|phosphatidylinositol biosynthetic process GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_03681	A	A1S	Potri.001G342000	Potri.001G342000(AS)	POPTR_0001s35680	sp|O48963|PHOT1_ARATH	Phototropin-1 OS=Arabidopsis thaliana GN=PHOT1 PE=1 SV=1	AT3G45780.2	| Symbols: PHOT1, NPH1, JK224, RPT1 | phototropin 1 | chr3:16818557-16823960 FORWARD LENGTH=996	LOC_Os12g01140.1	protein|AGC_PVPK_like_kin82y.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed	IMGA|Medtr5g069000.1	Microtubule-associated serine/threonine-protein kinase chr5 28211794-28220768 E EGN_Mt100125 20111014	GO:0000160|two-component signal transduction system (phosphorelay) GO:0006355|regulation of transcription, DNA-dependent GO:0006468|protein phosphorylation GO:0007165|signal transduction GO:0009637|response to blue light GO:0009638|phototropism GO:0009644|response to high light intensity GO:0009744|response to sucrose stimulus GO:0009903|chloroplast avoidance movement GO:0009904|chloroplast accumulation movement GO:0010114|response to red light GO:0010119|regulation of stomatal movement GO:0010155|regulation of proton transport GO:0010218|response to far red light GO:0010362|negative regulation of anion channel activity by blue light GO:0046777|protein autophosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005515|protein binding GO:0009882|blue light photoreceptor activity GO:0010181|FMN binding GO:0016301|kinase activity GO:0042802|identical protein binding	GO:0005737|cytoplasm GO:0005773|vacuole GO:0005886|plasma membrane GO:0009898|internal side of plasma membrane GO:0009986|cell surface
pt2_03682	A	A1S	Potri.001G341900	Potri.001G341900(AS)	POPTR_0001s35710	sp|O14802|RPC1_HUMAN	DNA-directed RNA polymerase III subunit RPC1 OS=Homo sapiens GN=POLR3A PE=1 SV=2	AT5G60040.1	| Symbols: NRPC1 | nuclear RNA polymerase C1 | chr5:24173590-24183269 FORWARD LENGTH=1376	LOC_Os04g41490.1	protein|DNA-directed RNA polymerase III subunit RPC1, putative, expressed	IMGA|Medtr5g023020.1	DNA-directed RNA polymerase chr5 8873323-8881931 E EGN_Mt100125 20111014	GO:0006302|double-strand break repair GO:0006310|DNA recombination GO:0006312|mitotic recombination GO:0006351|transcription, DNA-dependent GO:0006354|DNA-dependent transcription, elongation GO:0006396|RNA processing GO:0007062|sister chromatid cohesion GO:0007126|meiosis GO:0007129|synapsis GO:0007131|reciprocal meiotic recombination GO:0009560|embryo sac egg cell differentiation GO:0010332|response to gamma radiation GO:0010564|regulation of cell cycle process GO:0016567|protein ubiquitination GO:0032204|regulation of telomere maintenance GO:0042138|meiotic DNA double-strand break formation GO:0043247|telomere maintenance in response to DNA damage GO:0045132|meiotic chromosome segregation	GO:0003677|DNA binding GO:0003899|DNA-directed RNA polymerase activity GO:0008270|zinc ion binding GO:0032549|ribonucleoside binding	GO:0005634|nucleus
pt2_03683	A	A1S	Potri.001G341800	Potri.001G341800(AS)	POPTR_0001s35720	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03684	A	A1S	Potri.001G341700	Potri.001G341700(AS)	POPTR_0001s35730	sp|Q7M443|CHIT2_TULBA	Chitinase 2 OS=Tulipa bakeri PE=1 SV=1	NA	NA	LOC_Os10g28050.1	protein|chitinase 2, putative, expressed	IMGA|contig_108146_1.1	Chitinase A contig_108146 501-1585 E PREDN 20111014	NA	NA	NA
pt2_03685	A	A1S	Potri.001G341600	Potri.001G341600(AS)	POPTR_0001s35740	sp|Q9FJD5|LAC17_ARATH	Laccase-17 OS=Arabidopsis thaliana GN=LAC17 PE=2 SV=1	AT5G60020.1	| Symbols: LAC17, ATLAC17 | laccase 17 | chr5:24168072-24170223 FORWARD LENGTH=577	LOC_Os01g62490.1	protein|laccase precursor protein, putative, expressed	IMGA|Medtr5g069680.1	Laccase 1a chr5 28563726-28567609 H EGN_Mt100125 20111014	GO:0009698|phenylpropanoid metabolic process GO:0009809|lignin biosynthetic process GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process GO:0046274|lignin catabolic process GO:0055114|oxidation-reduction process	GO:0005507|copper ion binding GO:0016491|oxidoreductase activity GO:0052716|hydroquinone:oxygen oxidoreductase activity	GO:0005576|extracellular region GO:0048046|apoplast
pt2_03686	A	A1S	Potri.001G341400	Potri.001G341400(AS)	POPTR_0001s35760	sp|Q8VYR5|PP351_ARATH	Pentatricopeptide repeat-containing protein At4g35850, mitochondrial OS=Arabidopsis thaliana GN=At4g35850 PE=1 SV=1	AT4G35850.1	| Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr4:16983638-16986681 FORWARD LENGTH=444	LOC_Os05g05320.1	protein|PPR repeat domain containing protein, putative, expressed	IMGA|Medtr1g095880.1	Pentatricopeptide repeat-containing protein chr1 27567477-27561633 H EGN_Mt100125 20111014	GO:0009220|pyrimidine ribonucleotide biosynthetic process GO:0009640|photomorphogenesis GO:0009909|regulation of flower development GO:0010388|cullin deneddylation GO:0034968|histone lysine methylation	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_03687	A	A1S	Potri.001G341300	Potri.001G341300(AS)	POPTR_0001s35770	sp|O74362|ESF2_SCHPO	Pre-rRNA-processing protein esf2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=esf2 PE=1 SV=1	AT3G56510.2	| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr3:20944348-20946235 REVERSE LENGTH=257	LOC_Os07g46760.1	protein|RNA recognition motif containing protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003676|nucleic acid binding GO:0017025|TBP-class protein binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03688	A	A1S	Potri.001G341200	Potri.001G341200(AS)	POPTR_0001s35780	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03689	A	A1S	Potri.001G341100	Potri.001G341100(AS)	POPTR_0001s35790	sp|Q4R6F8|TCPB_MACFA	T-complex protein 1 subunit beta OS=Macaca fascicularis GN=CCT2 PE=2 SV=3	AT5G20890.1	| Symbols: | TCP-1/cpn60 chaperonin family protein | chr5:7087020-7089906 REVERSE LENGTH=527	LOC_Os03g42220.1	protein|T-complex protein, putative, expressed	IMGA|Medtr5g087560.1	T-complex protein 1 subunit eta chr5 36942040-36950933 F EGN_Mt100125 20111014	GO:0006094|gluconeogenesis GO:0006364|rRNA processing GO:0006457|protein folding GO:0007010|cytoskeleton organization GO:0009664|plant-type cell wall organization GO:0010498|proteasomal protein catabolic process GO:0042545|cell wall modification GO:0044267|cellular protein metabolic process	GO:0005524|ATP binding GO:0051082|unfolded protein binding	GO:0005618|cell wall GO:0005737|cytoplasm GO:0005829|cytosol GO:0046658|anchored to plasma membrane
pt2_03690	A	A1S	Potri.001G341000	Potri.001G341000(AS)	POPTR_0001s35810	sp|Q6F4F5|C724B_ORYSJ	Cytochrome P450 724B1 OS=Oryza sativa subsp. japonica GN=CYP724B1 PE=1 SV=1	AT5G14400.1	| Symbols: CYP724A1 | cytochrome P450, family 724, subfamily A, polypeptide 1 | chr5:4644128-4646382 FORWARD LENGTH=367	LOC_Os04g39430.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g020020.1	Cytochrome P450 chr5 7360730-7370655 E EGN_Mt100125 20111014	GO:0016132|brassinosteroid biosynthetic process GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0010012|steroid 22-alpha hydroxylase activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005575|cellular_component
pt2_03691	A	A1S	Potri.001G340900	Potri.001G340900(AS)	POPTR_0001s35820	NA	NA	AT3G01660.1	| Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr3:245532-246432 FORWARD LENGTH=273	LOC_Os04g40530.1	protein|methyltransferase domain containing protein, expressed	NA	NA	GO:0000023|maltose metabolic process GO:0008152|metabolic process GO:0016556|mRNA modification GO:0019252|starch biosynthetic process	GO:0008168|methyltransferase activity	GO:0005575|cellular_component
pt2_03692	A	A1S	Potri.001G340800	Potri.001G340800(AS)	POPTR_0001s35830	sp|Q04836|ROC3_ARATH	31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana GN=RBP31 PE=1 SV=1	AT4G24770.1	| Symbols: RBP31, ATRBP31, CP31, ATRBP33 | 31-kDa RNA binding protein | chr4:12766223-12767952 REVERSE LENGTH=329	LOC_Os09g39180.1	protein|RNA recognition motif containing protein, putative, expressed	IMGA|contig_61747_1.1	Polyadenylate-binding protein contig_61747 97-2534 F PREDN 20111014	GO:0000023|maltose metabolic process GO:0006098|pentose-phosphate shunt GO:0006396|RNA processing GO:0009073|aromatic amino acid family biosynthetic process GO:0009409|response to cold GO:0009451|RNA modification GO:0009631|cold acclimation GO:0009697|salicylic acid biosynthetic process GO:0009814|defense response, incompatible interaction GO:0009965|leaf morphogenesis GO:0010027|thylakoid membrane organization GO:0016226|iron-sulfur cluster assembly GO:0016553|base conversion or substitution editing GO:0019252|starch biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019684|photosynthesis, light reaction GO:0030154|cell differentiation GO:0042742|defense response to bacterium GO:0043489|RNA stabilization GO:0045036|protein targeting to chloroplast GO:0045087|innate immune response GO:0045893|positive regulation of transcription, DNA-dependent	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding GO:0008266|poly(U) RNA binding	GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009570|chloroplast stroma GO:0009579|thylakoid GO:0009941|chloroplast envelope
pt2_03693	A	A2S	Potri.001G340700	Potri.001G340700(AS) Potri.T067400(AS)	POPTR_0001s35840	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006508|proteolysis GO:0008152|metabolic process	GO:0004222|metalloendopeptidase activity GO:0008237|metallopeptidase activity GO:0008270|zinc ion binding	GO:0005576|extracellular region GO:0005886|plasma membrane GO:0031012|extracellular matrix GO:0031225|anchored to membrane
pt2_03694	A	A5S	Potri.T067300	Potri.T067300(AS) Potri.001G340500(AS) Potri.001G340600(AS) Potri.001G340200(DS) Potri.001G340400(DS)	POPTR_0001s35850	NA	NA	AT3G01680.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28 (InterPro:IPR021640); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01670.1); Has 122 Blast hits to 112 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:252033-255246 FORWARD LENGTH=740	NA	NA	IMGA|Medtr1g075180.1	Sieve element-occluding protein chr1 18986040-18989257 E EGN_Mt100125 20111014	NA	GO:0043621|protein self-association	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03695	A	A7S	Potri.001G340400	Potri.001G340400(AS) Potri.T067300(BS) Potri.001G340200(BS) Potri.001G340500(BS) Potri.001G340300(BS) Potri.001G340600(BS) Potri.017G071000(DS)	POPTR_0001s35870	NA	NA	AT3G01680.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28 (InterPro:IPR021640); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01670.1); Has 122 Blast hits to 112 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:252033-255246 FORWARD LENGTH=740	NA	NA	IMGA|Medtr1g075180.1	Sieve element-occluding protein chr1 18986040-18989257 E EGN_Mt100125 20111014	NA	GO:0043621|protein self-association	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03696	A	A2S	Potri.001G340300	Potri.001G340300(AS) Potri.017G071000(DS)	POPTR_0001s35880	NA	NA	AT3G01680.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28 (InterPro:IPR021640); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01670.1); Has 122 Blast hits to 112 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:252033-255246 FORWARD LENGTH=740	NA	NA	IMGA|Medtr1g075180.1	Sieve element-occluding protein chr1 18986040-18989257 E EGN_Mt100125 20111014	NA	GO:0043621|protein self-association	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03697	G	G1	NA	NA	POPTR_0001s35890	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03698	A	A3S	Potri.001G340200	Potri.001G340200(AS) Potri.T067300(DS) Potri.001G340400(DS)	POPTR_0001s35900	NA	NA	AT3G01680.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28 (InterPro:IPR021640); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01670.1); Has 122 Blast hits to 112 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:252033-255246 FORWARD LENGTH=740	NA	NA	IMGA|Medtr1g075180.1	Sieve element-occluding protein chr1 18986040-18989257 E EGN_Mt100125 20111014	NA	GO:0043621|protein self-association	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03699	A	A1S	Potri.001G340100	Potri.001G340100(AS)	POPTR_0001s35910	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03700	A	A1S	Potri.001G340000	Potri.001G340000(AS)	POPTR_0001s35920	sp|Q5ZJ01|F108B_CHICK	Abhydrolase domain-containing protein FAM108B1 OS=Gallus gallus GN=FAM108B1 PE=2 SV=1	AT5G14390.1	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr5:4637551-4639575 REVERSE LENGTH=369	LOC_Os12g18860.1	protein|OsPOP23 - Putative Prolyl Oligopeptidase homologue, expressed	IMGA|Medtr5g029210.1	Abhydrolase domain-containing protein FAM108C1 chr5 11963126-11958092 E EGN_Mt100125 20111014	GO:0008150|biological_process GO:0008284|positive regulation of cell proliferation	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_03701	A	A1S	Potri.001G339900	Potri.001G339900(AS)	POPTR_0001s35930	sp|P0CQ26|ATP23_CRYNJ	Mitochondrial inner membrane protease ATP23 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=ATP23 PE=3 SV=1	AT3G03420.1	| Symbols: | Ku70-binding family protein | chr3:812527-813644 FORWARD LENGTH=194	LOC_Os12g19090.1	protein|metalloprotease ATP23, putative, expressed	NA	NA	NA	GO:0004222|metalloendopeptidase activity	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_03702	C	C1S	Potri.001G339800	Potri.001G339800(CS)	NA	NA	AT5G31412.1	| Symbols: | hAT transposon superfamily protein | chr5:11541463-11543768 REVERSE LENGTH=433	LOC_Os07g15420.1	protein|transposon protein, putative, Ac/Ds sub-class, expressed	IMGA|Medtr5g012510.1	hypothetical protein chr5 3512350-3509693 H EGN_Mt100125 20111014	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0008150|biological_process	GO:0003677|DNA binding GO:0046983|protein dimerization activity	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_03703	G	G1	NA	NA	POPTR_0001s35940	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03704	A	A1S	Potri.001G339600	Potri.001G339600(AS)	POPTR_0001s35950	sp|P40377|MCM2_SCHPO	DNA replication licensing factor mcm2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mcm2 PE=1 SV=1	AT1G44900.2	| Symbols: MCM2 | minichromosome maintenance (MCM2/3/5) family protein | chr1:16970291-16974457 FORWARD LENGTH=934	LOC_Os11g29380.1	protein|MCM2 - Putative minichromosome maintenance MCM complex subunit 2, expressed	NA	NA	GO:0006084|acetyl-CoA metabolic process GO:0006260|DNA replication GO:0006261|DNA-dependent DNA replication GO:0006268|DNA unwinding involved in replication GO:0006270|DNA replication initiation GO:0006275|regulation of DNA replication GO:0006306|DNA methylation GO:0008283|cell proliferation GO:0009165|nucleotide biosynthetic process GO:0009790|embryo development GO:0009909|regulation of flower development GO:0010082|regulation of root meristem growth GO:0034968|histone lysine methylation GO:0042127|regulation of cell proliferation GO:0048364|root development GO:0051567|histone H3-K9 methylation GO:0051726|regulation of cell cycle	GO:0003677|DNA binding GO:0005524|ATP binding GO:0008094|DNA-dependent ATPase activity	GO:0000790|nuclear chromatin GO:0005634|nucleus GO:0005829|cytosol
pt2_03705	A	A1S	Potri.001G339500	Potri.001G339500(AS)	POPTR_0001s35960	sp|O24554|PLY_ZINEL	Pectate lyase OS=Zinnia elegans PE=1 SV=1	AT4G24780.2	| Symbols: | Pectin lyase-like superfamily protein | chr4:12770631-12772227 REVERSE LENGTH=408	LOC_Os04g05050.1	protein|pectate lyase precursor, putative, expressed	IMGA|AC235753_8.1	Pectate lyase AC235753.2 24915-27580 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0030570|pectate lyase activity	GO:0005576|extracellular region
pt2_03706	B	B3S	Potri.013G071200	Potri.013G071200(BS) Potri.001G391600(BS) Potri.001G391800(BS)	POPTR_0001s35970	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03707	B	B1S	Potri.T125800	Potri.T125800(BS)	POPTR_0001s35980	sp|Q9C9A9|COL7_ARATH	Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana GN=COL7 PE=2 SV=1	AT5G14370.1	| Symbols: | CCT motif family protein | chr5:4632147-4633651 REVERSE LENGTH=339	LOC_Os02g05470.1	protein|CCT motif family protein, expressed	IMGA|Medtr5g072780.1	Zinc finger protein CONSTANS-like protein chr5 29979636-29981275 F EGN_Mt100125 20111014	NA	NA	GO:0005634|nucleus
pt2_03708	A	A1S	Potri.T125900	Potri.T125900(AS)	POPTR_0001s35990	sp|P13853|HS17C_ARATH	17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana GN=HSP17.6C PE=2 SV=2	AT1G53540.1	| Symbols: | HSP20-like chaperones superfamily protein | chr1:19980510-19980983 FORWARD LENGTH=157	LOC_Os01g04340.1	protein|hsp20/alpha crystallin family protein, putative, expressed	IMGA|Medtr5g064060.1	class I heat shock protein chr5 25868107-25868924 F EGN_Mt100125 20111014	GO:0006457|protein folding GO:0009408|response to heat GO:0009644|response to high light intensity GO:0034976|response to endoplasmic reticulum stress GO:0042542|response to hydrogen peroxide	NA	GO:0005737|cytoplasm
pt2_03709	A	A2S	Potri.001G339100	Potri.001G339100(AS) Potri.T126000(AS)	POPTR_0001s36000	sp|Q0WPX7|BAG2_ARATH	BAG family molecular chaperone regulator 2 OS=Arabidopsis thaliana GN=BAG2 PE=2 SV=1	AT5G14360.1	| Symbols: | Ubiquitin-like superfamily protein | chr5:4631038-4631641 FORWARD LENGTH=163	LOC_Os01g67950.1	protein|ubiquitin family protein, putative, expressed	IMGA|contig_48397_1.1	Protein binding protein contig_48397 106-3094 F PREDN 20111014	NA	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_03710	A	A1S	Potri.001G338900	Potri.001G338900(AS)	POPTR_0001s36010	sp|Q8GUM4|Y3739_ARATH	Uncharacterized membrane protein At3g27390 OS=Arabidopsis thaliana GN=At3g27390 PE=1 SV=2	AT5G40640.1	| Symbols: | unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27390.1); Has 104 Blast hits to 102 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | chr5:16277345-16280258 FORWARD LENGTH=586	LOC_Os04g40700.1	protein|steroid nuclear receptor, ligand-binding, putative, expressed	NA	NA	NA	NA	GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_03711	A	A1S	Potri.001G338800	Potri.001G338800(AS)	POPTR_0001s36020	sp|Q9SK27|ENL1_ARATH	Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060 PE=1 SV=2	AT5G14345.1	| Symbols: ENODL21, AtENODL21 | early nodulin-like protein 21 | chr5:4626175-4626722 REVERSE LENGTH=145	LOC_Os04g57750.1	protein|plastocyanin-like domain containing protein, putative, expressed	IMGA|Medtr5g006040.1	Early nodulin-like protein chr5 502223-501280 F EGN_Mt100125 20111014	NA	GO:0005507|copper ion binding GO:0009055|electron carrier activity	NA
pt2_03712	A	A2S	Potri.001G338700	Potri.001G338700(AS) Potri.018G049800(DS)	POPTR_0001s36030	sp|Q9CY21|WBS22_MOUSE	Uncharacterized methyltransferase WBSCR22 OS=Mus musculus GN=Wbscr22 PE=2 SV=1	AT5G57280.1	| Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr5:23204533-23206485 FORWARD LENGTH=289	LOC_Os02g56020.1	protein|methyltransferase, putative, expressed	NA	NA	GO:0006364|rRNA processing GO:0008152|metabolic process	GO:0008168|methyltransferase activity	GO:0005634|nucleus GO:0005730|nucleolus
pt2_03713	A	A1S	Potri.001G338500	Potri.001G338500(AS)	POPTR_0001s36040	NA	NA	AT5G40645.1	| Symbols: | RPM1-interacting protein 4 (RIN4) family protein | chr5:16280410-16280883 REVERSE LENGTH=73	LOC_Os06g17870.1	protein|nitrate-induced NOI protein, putative, expressed	IMGA|Medtr5g096030.1	RPM1-interacting protein chr5 40945881-40948340 F EGN_Mt100125 20111014	GO:0006944|cellular membrane fusion GO:0010167|response to nitrate GO:0048193|Golgi vesicle transport	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_03714	A	A1S	Potri.001G338400	Potri.001G338400(AS)	POPTR_0001s36050	sp|Q8LB02|DHSB2_ARATH	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial OS=Arabidopsis thaliana GN=SDH2-2 PE=1 SV=2	AT5G40650.1	| Symbols: SDH2-2 | succinate dehydrogenase 2-2 | chr5:16281462-16283296 FORWARD LENGTH=280	LOC_Os08g02640.2	protein|succinate dehydrogenase iron-sulfur subunit 2,mitochondrial precursor, putative, expressed	IMGA|contig_123720_1.1	Succinate dehydrogenase iron-sulfur protein contig_123720 198-1969 E PREDN 20111014	GO:0006099|tricarboxylic acid cycle GO:0006121|mitochondrial electron transport, succinate to ubiquinone GO:0055114|oxidation-reduction process	GO:0000104|succinate dehydrogenase activity GO:0008270|zinc ion binding GO:0009055|electron carrier activity GO:0016491|oxidoreductase activity GO:0051536|iron-sulfur cluster binding GO:0051537|2 iron, 2 sulfur cluster binding	GO:0005739|mitochondrion GO:0005749|mitochondrial respiratory chain complex II GO:0045281|succinate dehydrogenase complex
pt2_03715	A	A1S	Potri.001G338300	Potri.001G338300(AS)	POPTR_0001s36060	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03716	A	A1S	Potri.001G338200	Potri.001G338200(AS)	POPTR_0001s36070	NA	NA	AT5G40660.1	| Symbols: | ATP12 protein-related | chr5:16283650-16285161 REVERSE LENGTH=325	LOC_Os07g44940.1	protein|ATP12 ATPase, putative, expressed	NA	NA	GO:0043461|proton-transporting ATP synthase complex assembly	NA	GO:0005739|mitochondrion
pt2_03717	A	A1S	Potri.001G338100	Potri.001G338100(AS)	POPTR_0001s36080	NA	NA	AT5G40690.1	| Symbols: | CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:16290770-16291402 FORWARD LENGTH=210	LOC_Os05g23130.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	NA	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_03718	A	A1S	Potri.001G338000	Potri.001G338000(AS)	POPTR_0001s36090	sp|Q2H102|BST1_CHAGB	GPI inositol-deacylase OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=BST1 PE=3 SV=2	AT3G27325.2	| Symbols: | hydrolases, acting on ester bonds | chr3:10095956-10102087 FORWARD LENGTH=1121	LOC_Os09g09360.1	protein|esterase/lipase/thioesterase, putative, expressed	NA	NA	GO:0006505|GPI anchor metabolic process GO:0006886|intracellular protein transport	GO:0016788|hydrolase activity, acting on ester bonds	GO:0005739|mitochondrion GO:0005774|vacuolar membrane GO:0005783|endoplasmic reticulum GO:0031227|intrinsic to endoplasmic reticulum membrane
pt2_03719	C	C1S	Potri.001G338000	Potri.001G338000(CS)	sp|Q2H102|BST1_CHAGB	GPI inositol-deacylase OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=BST1 PE=3 SV=2	AT3G27325.2	| Symbols: | hydrolases, acting on ester bonds | chr3:10095956-10102087 FORWARD LENGTH=1121	LOC_Os09g09360.1	protein|esterase/lipase/thioesterase, putative, expressed	NA	NA	GO:0006505|GPI anchor metabolic process GO:0006886|intracellular protein transport	GO:0016788|hydrolase activity, acting on ester bonds	GO:0005739|mitochondrion GO:0005774|vacuolar membrane GO:0005783|endoplasmic reticulum GO:0031227|intrinsic to endoplasmic reticulum membrane
pt2_03720	A	A1S	Potri.001G337900	Potri.001G337900(AS)	POPTR_0001s36110	sp|P0C897|Y3264_ARATH	Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana GN=At3g02645 PE=3 SV=1	AT3G02645.1	| Symbols: | Plant protein of unknown function (DUF247) | chr3:566271-567860 FORWARD LENGTH=529	LOC_Os06g08120.1	protein|plant protein of unknown function domain containing protein, expressed	IMGA|Medtr5g087580.1	hypothetical protein chr5 36953659-36954327 H EGN_Mt100125 20111014	NA	NA	GO:0005886|plasma membrane
pt2_03721	B	B1S	Potri.001G337800	Potri.001G337800(BS)	POPTR_0001s36120	sp|P0C897|Y3264_ARATH	Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana GN=At3g02645 PE=3 SV=1	AT3G02645.1	| Symbols: | Plant protein of unknown function (DUF247) | chr3:566271-567860 FORWARD LENGTH=529	LOC_Os06g08120.1	protein|plant protein of unknown function domain containing protein, expressed	IMGA|Medtr5g087580.1	hypothetical protein chr5 36953659-36954327 H EGN_Mt100125 20111014	NA	NA	GO:0005886|plasma membrane
pt2_03722	A	A1S	Potri.001G337700	Potri.001G337700(AS)	POPTR_0001s36130	NA	NA	AT5G40740.1	| Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:16302229-16306371 REVERSE LENGTH=741	LOC_Os02g22370.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0005515|protein binding GO:0051011|microtubule minus-end binding	GO:0005634|nucleus GO:0005819|spindle GO:0009524|phragmoplast
pt2_03723	A	A1S	Potri.001G337600	Potri.001G337600(AS)	POPTR_0001s36140	NA	NA	AT5G40740.1	| Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:16302229-16306371 REVERSE LENGTH=741	LOC_Os02g22370.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0005515|protein binding GO:0051011|microtubule minus-end binding	GO:0005634|nucleus GO:0005819|spindle GO:0009524|phragmoplast
pt2_03724	A	A1S	Potri.001G337500	Potri.001G337500(AS)	POPTR_0001s36150	NA	NA	AT3G27310.1	| Symbols: PUX1 | plant UBX domain-containing protein 1 | chr3:10087360-10089077 REVERSE LENGTH=251	NA	NA	NA	NA	GO:0035265|organ growth GO:0043241|protein complex disassembly	NA	GO:0005634|nucleus
pt2_03725	A	A1S	Potri.001G337400	Potri.001G337400(AS)	POPTR_0001s36160	sp|Q9FJI5|G6PD6_ARATH	Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform 2 OS=Arabidopsis thaliana GN=ACG12 PE=1 SV=1	AT5G40760.1	| Symbols: G6PD6 | glucose-6-phosphate dehydrogenase 6 | chr5:16311284-16314556 FORWARD LENGTH=515	LOC_Os02g38840.2	protein|glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform, putative, expressed	NA	NA	GO:0006006|glucose metabolic process GO:0009051|pentose-phosphate shunt, oxidative branch GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0004345|glucose-6-phosphate dehydrogenase activity GO:0050661|NADP binding	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_03726	A	A1S	Potri.001G337300	Potri.001G337300(AS)	POPTR_0001s36170	sp|Q9LU91|SKI14_ARATH	F-box protein SKIP14 OS=Arabidopsis thaliana GN=SKIP14 PE=1 SV=1	AT3G26000.1	| Symbols: | Ribonuclease inhibitor | chr3:9507042-9508542 REVERSE LENGTH=453	LOC_Os04g40910.1	protein|OsFBX146 - F-box domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_03727	A	A1S	Potri.001G337200	Potri.001G337200(AS)	POPTR_0001s36180	sp|Q9FNJ5|FDL31_ARATH	F-box/FBD/LRR-repeat protein At5g22660 OS=Arabidopsis thaliana GN=At5g22660 PE=2 SV=1	AT5G22660.1	| Symbols: | FBD, F-box, Skp2-like and Leucine Rich Repeat domains containing protein | chr5:7536906-7537853 REVERSE LENGTH=315	LOC_Os10g03870.1	protein|OsFBX353 - F-box domain containing protein, expressed	IMGA|Medtr5g066560.1	F-box/FBD/LRR-repeat protein chr5 27110601-27111816 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03728	A	A1S	Potri.001G337100	Potri.001G337100(AS)	POPTR_0001s36190	sp|Q6J163|5NG4_PINTA	Auxin-induced protein 5NG4 OS=Pinus taeda PE=2 SV=1	AT3G28050.1	| Symbols: | nodulin MtN21 /EamA-like transporter family protein | chr3:10442984-10445216 FORWARD LENGTH=367	LOC_Os05g33900.1	protein|auxin-induced protein 5NG4, putative, expressed	IMGA|Medtr5g034910.2	Auxin-induced protein 5NG4 chr5 14753299-14756486 F EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0016020|membrane
pt2_03729	A	A1S	Potri.001G336900	Potri.001G336900(AS)	POPTR_0001s36200	sp|Q6P298|NUBP1_DANRE	Cytosolic Fe-S cluster assembly factor nubp1 OS=Danio rerio GN=nubp1 PE=2 SV=2	AT5G50960.1	| Symbols: NBP35, ATNBP35 | nucleotide binding protein 35 | chr5:20734267-20735824 FORWARD LENGTH=350	LOC_Os02g38900.1	protein|cytosolic Fe-S cluster assembling factor NBP35, putative, expressed	NA	NA	NA	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0042803|protein homodimerization activity GO:0051536|iron-sulfur cluster binding	GO:0005634|nucleus GO:0005829|cytosol
pt2_03730	A	A1S	Potri.001G336800	Potri.001G336800(AS)	POPTR_0001s36210	sp|B9SLR1|Y231_RICCO	UPF0392 protein RCOM_0530710 OS=Ricinus communis GN=RCOM_0530710 PE=3 SV=1	AT3G27330.1	| Symbols: | zinc finger (C3HC4-type RING finger) family protein | chr3:10116950-10120516 REVERSE LENGTH=913	LOC_Os08g02850.1	protein|zinc finger family protein, putative, expressed	IMGA|Medtr5g037020.1	hypothetical protein chr5 15737089-15739189 E EGN_Mt100125 20111014	NA	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_03731	A	A1S	Potri.001G336700	Potri.001G336700(AS)	POPTR_0001s36220	sp|P81394|MYB15_ANTMA	Myb-related protein 315 OS=Antirrhinum majus GN=MYB315 PE=2 SV=1	AT5G14340.1	| Symbols: AtMYB40, MYB40 | myb domain protein 40 | chr5:4623367-4624779 FORWARD LENGTH=263	LOC_Os09g23620.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr5g078140.1	P-type R2R3 Myb protein chr5 32379000-32381283 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_03732	A	A1S	Potri.001G336600	Potri.001G336600(AS)	POPTR_0001s36230	NA	NA	AT3G27340.1	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal (InterPro:IPR010376); Has 1035 Blast hits to 1035 proteins in 399 species: Archae - 0; Bacteria - 765; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 231 (source: NCBI BLink). | chr3:10121303-10122692 FORWARD LENGTH=141	LOC_Os02g10430.1	 protein|1-5-phosphoribosyl-5-5- phosphoribosylaminomethylideneaminoimidazole-4- carboxamide isomerase, chloroplast precursor, putative, expressed	NA	NA	NA	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_03733	A	A1S	Potri.001G336500	Potri.001G336500(AS)	POPTR_0001s36240	NA	NA	AT5G40710.1	| Symbols: | zinc finger (C2H2 type) family protein | chr5:16295091-16296810 FORWARD LENGTH=272	LOC_Os12g13130.2	protein|ZOS12-03 - C2H2 zinc finger protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003676|nucleic acid binding GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0005739|mitochondrion
pt2_03734	A	A1S	Potri.001G336400	Potri.001G336400(AS)	POPTR_0001s36250	NA	NA	AT3G01720.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25265.1); Has 374 Blast hits to 211 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 316; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). | chr3:262412-265608 REVERSE LENGTH=802	LOC_Os01g67750.1	protein|expressed protein	IMGA|Medtr5g089520.1	hypothetical protein chr5 37879484-37872834 E EGN_Mt100125 20111014	GO:0006816|calcium ion transport GO:0007030|Golgi organization GO:0008150|biological_process GO:0009651|response to salt stress GO:0009744|response to sucrose stimulus GO:0009749|response to glucose stimulus GO:0009750|response to fructose stimulus	GO:0016757|transferase activity, transferring glycosyl groups	NA
pt2_03735	A	A1S	Potri.001G336300	Potri.001G336300(AS)	POPTR_0001s36260	NA	NA	AT3G27350.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40700.1); Has 230 Blast hits to 202 proteins in 35 species: Archae - 0; Bacteria - 3; Metazoa - 77; Fungi - 4; Plants - 130; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). | chr3:10126238-10127600 FORWARD LENGTH=274	LOC_Os12g17530.1	protein|expressed protein	IMGA|Medtr5g036560.1	hypothetical protein chr5 15531209-15521710 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03736	A	A1S	Potri.001G336200	Potri.001G336200(AS)	POPTR_0001s36270	NA	NA	AT5G40690.1	| Symbols: | CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:16290770-16291402 FORWARD LENGTH=210	LOC_Os05g23130.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	NA	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_03737	A	A1S	Potri.001G336000	Potri.001G336000(AS)	POPTR_0001s36275	NA	NA	AT5G48050.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:19472661-19473770 REVERSE LENGTH=369	LOC_Os02g01840.1	protein|retrotransposon protein, putative, unclassified, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_03738	A	A1S	Potri.001G335900	Potri.001G335900(AS)	POPTR_0001s36280	sp|Q9LMA1|FMO1_ARATH	Probable flavin-containing monooxygenase 1 OS=Arabidopsis thaliana GN=FMO1 PE=2 SV=1	AT1G19250.1	| Symbols: FMO1 | flavin-dependent monooxygenase 1 | chr1:6650656-6653053 REVERSE LENGTH=530	LOC_Os03g08410.1	protein|flavin-containing monooxygenase family protein, putative, expressed	NA	NA	GO:0009626|plant-type hypersensitive response GO:0009627|systemic acquired resistance GO:0009870|defense response signaling pathway, resistance gene-dependent GO:0010204|defense response signaling pathway, resistance gene-independent GO:0042742|defense response to bacterium GO:0050832|defense response to fungus GO:0051707|response to other organism GO:0055114|oxidation-reduction process GO:0071456|cellular response to hypoxia	GO:0004497|monooxygenase activity GO:0004499|N,N-dimethylaniline monooxygenase activity GO:0016491|oxidoreductase activity GO:0050660|flavin adenine dinucleotide binding GO:0050661|NADP binding	GO:0009507|chloroplast GO:0031227|intrinsic to endoplasmic reticulum membrane
pt2_03739	A	A1S	Potri.001G335800	Potri.001G335800(AS)	POPTR_0001s36290	sp|P25861|G3PC_ANTMA	Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Antirrhinum majus GN=GAPC PE=2 SV=1	AT3G04120.1	| Symbols: GAPC, GAPC-1, GAPC1 | glyceraldehyde-3-phosphate dehydrogenase C subunit 1 | chr3:1081077-1083131 FORWARD LENGTH=338	LOC_Os04g40950.1	protein|glyceraldehyde-3-phosphate dehydrogenase, putative, expressed	NA	NA	GO:0006006|glucose metabolic process GO:0006007|glucose catabolic process GO:0006094|gluconeogenesis GO:0006096|glycolysis GO:0006098|pentose-phosphate shunt GO:0006833|water transport GO:0006950|response to stress GO:0006972|hyperosmotic response GO:0006979|response to oxidative stress GO:0007010|cytoskeleton organization GO:0007030|Golgi organization GO:0009060|aerobic respiration GO:0009266|response to temperature stimulus GO:0009408|response to heat GO:0009651|response to salt stress GO:0009744|response to sucrose stimulus GO:0010154|fruit development GO:0010498|proteasomal protein catabolic process GO:0034976|response to endoplasmic reticulum stress GO:0042542|response to hydrogen peroxide GO:0046686|response to cadmium ion GO:0048316|seed development GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0004365|glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity GO:0005507|copper ion binding GO:0008886|glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity GO:0016620|oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor GO:0050661|NADP binding GO:0051287|NAD binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0005740|mitochondrial envelope GO:0005774|vacuolar membrane GO:0005829|cytosol GO:0005886|plasma membrane GO:0009507|chloroplast GO:0016020|membrane GO:0048046|apoplast
pt2_03740	A	A1S	Potri.001G335700	Potri.001G335700(AS)	POPTR_0001s36300	sp|Q54GI9|PHB1_DICDI	Prohibitin-1, mitochondrial OS=Dictyostelium discoideum GN=phbA PE=3 SV=1	AT5G40770.1	| Symbols: ATPHB3, PHB3 | prohibitin 3 | chr5:16315589-16316621 REVERSE LENGTH=277	LOC_Os02g37000.1	protein|mitochondrial prohibitin complex protein 1, putative, expressed	IMGA|Medtr5g093030.1	Prohibitin chr5 39571932-39574599 H EGN_Mt100125 20111014	GO:0001510|RNA methylation GO:0006626|protein targeting to mitochondrion GO:0006950|response to stress GO:0007005|mitochondrion organization GO:0009651|response to salt stress GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0016049|cell growth GO:0034976|response to endoplasmic reticulum stress GO:0048527|lateral root development GO:0071731|response to nitric oxide	NA	GO:0005730|nucleolus GO:0005739|mitochondrion GO:0005747|mitochondrial respiratory chain complex I GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005886|plasma membrane GO:0016020|membrane
pt2_03741	A	A1S	Potri.001G335600	Potri.001G335600(AS)	POPTR_0001s36310	NA	NA	AT3G01740.1	| Symbols: | Mitochondrial ribosomal protein L37 | chr3:268118-268498 FORWARD LENGTH=126	LOC_Os12g14080.2	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_03742	A	A1S	Potri.001G335400	Potri.001G335400(AS)	POPTR_0001s36320	sp|Q6GNY1|MIB1_XENLA	E3 ubiquitin-protein ligase mib1 OS=Xenopus laevis GN=mib1 PE=2 SV=1	AT3G01750.1	| Symbols: | Ankyrin repeat family protein | chr3:270615-272691 FORWARD LENGTH=664	LOC_Os05g23320.2	protein|expressed protein	NA	NA	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_03743	A	A1S	Potri.001G335300	Potri.001G335300(AS)	POPTR_0001s36330	sp|Q9FKS8|LHT1_ARATH	Lysine histidine transporter 1 OS=Arabidopsis thaliana GN=LHT1 PE=1 SV=1	AT5G40780.1	| Symbols: LHT1 | lysine histidine transporter 1 | chr5:16323823-16327082 FORWARD LENGTH=446	LOC_Os08g03350.1	protein|amino acid transporter, putative, expressed	IMGA|Medtr5g054730.1	Lysine/histidine transporter chr5 22005975-22010432 H EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0006612|protein targeting to membrane GO:0006820|anion transport GO:0006862|nucleotide transport GO:0006865|amino acid transport GO:0006888|ER to Golgi vesicle-mediated transport GO:0006944|cellular membrane fusion GO:0010363|regulation of plant-type hypersensitive response GO:0015696|ammonium transport GO:0015802|basic amino acid transport GO:0030968|endoplasmic reticulum unfolded protein response GO:0043069|negative regulation of programmed cell death GO:0043090|amino acid import GO:0043269|regulation of ion transport GO:0080167|response to karrikin	GO:0015171|amino acid transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_03744	A	A1S	Potri.001G335200	Potri.001G335200(AS)	POPTR_0001s36340	sp|Q9FKS8|LHT1_ARATH	Lysine histidine transporter 1 OS=Arabidopsis thaliana GN=LHT1 PE=1 SV=1	AT5G40780.2	| Symbols: | lysine histidine transporter 1 | chr5:16323823-16327082 FORWARD LENGTH=445	LOC_Os08g03350.1	protein|amino acid transporter, putative, expressed	IMGA|Medtr5g054730.1	Lysine/histidine transporter chr5 22005975-22010432 H EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0006612|protein targeting to membrane GO:0006820|anion transport GO:0006862|nucleotide transport GO:0006865|amino acid transport GO:0006888|ER to Golgi vesicle-mediated transport GO:0006944|cellular membrane fusion GO:0010363|regulation of plant-type hypersensitive response GO:0015696|ammonium transport GO:0015802|basic amino acid transport GO:0030968|endoplasmic reticulum unfolded protein response GO:0043069|negative regulation of programmed cell death GO:0043090|amino acid import GO:0043269|regulation of ion transport GO:0080167|response to karrikin	GO:0015171|amino acid transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_03745	A	A1S	Potri.001G335100	Potri.001G335100(AS)	POPTR_0001s36350	NA	NA	AT5G14280.1	| Symbols: | DNA-binding storekeeper protein-related | chr5:4609123-4611444 FORWARD LENGTH=572	LOC_Os05g23700.1	protein|DNA-binding storekeeper protein-related, putative, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0008150|biological_process	NA	GO:0005634|nucleus GO:0016021|integral to membrane
pt2_03746	A	A1S	Potri.001G335000	Potri.001G335000(AS)	POPTR_0001s36360	sp|Q9LK27|GTE8_ARATH	Transcription factor GTE8 OS=Arabidopsis thaliana GN=GTE8 PE=2 SV=2	AT3G27260.1	| Symbols: GTE8 | global transcription factor group E8 | chr3:10068411-10072403 FORWARD LENGTH=813	LOC_Os02g38980.3	protein|bromodomain domain containing protein, expressed	IMGA|contig_166847_1.1	Bromodomain protein-like protein contig_166847 889-2214 H PREDN 20111014	GO:0008150|biological_process	GO:0003677|DNA binding GO:0005515|protein binding	GO:0005634|nucleus GO:0009507|chloroplast
pt2_03747	A	A1S	Potri.001G334900	Potri.001G334900(AS)	POPTR_0001s36370	sp|P23919|KTHY_HUMAN	Thymidylate kinase OS=Homo sapiens GN=DTYMK PE=1 SV=4	AT5G59440.3	| Symbols: ZEU1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:23971397-23972729 FORWARD LENGTH=271	LOC_Os07g44630.1	protein|thymidylate kinase, putative, expressed	NA	NA	GO:0006233|dTDP biosynthetic process GO:0009061|anaerobic respiration GO:0019690|pyrimidine deoxyribonucleoside interconversion	GO:0004798|thymidylate kinase activity GO:0005524|ATP binding	GO:0005654|nucleoplasm GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0005829|cytosol GO:0009507|chloroplast
pt2_03748	A	A2S	Potri.010G016600	Potri.010G016600(AS) Potri.016G069800(DS)	POPTR_0001s36380	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03749	A	A1S	Potri.001G362600	Potri.001G362600(AS)	POPTR_0001s36390	sp|A6YIH8|C7D55_HYOMU	Premnaspirodiene oxygenase OS=Hyoscyamus muticus GN=CYP71D55 PE=1 SV=1	AT3G26300.1	| Symbols: CYP71B34 | cytochrome P450, family 71, subfamily B, polypeptide 34 | chr3:9639199-9640866 REVERSE LENGTH=500	LOC_Os09g10340.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g094550.1	Cytochrome P450 chr5 40288757-40290756 E EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	NA
pt2_03750	A	A1S	Potri.001G362700	Potri.001G362700(AS)	POPTR_0001s36400	sp|O48923|C71DA_SOYBN	Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 PE=2 SV=1	AT5G25120.1	| Symbols: CYP71B11 | ytochrome p450, family 71, subfamily B, polypeptide 11 | chr5:8662851-8664432 FORWARD LENGTH=496	LOC_Os10g09160.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g073250.1	Cytochrome P450 chr5 30188970-30187259 H EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005886|plasma membrane
pt2_03751	R	R	NA	NA	POPTR_0001s36410	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03752	A	A2S	Potri.001G362900	Potri.001G362900(AS) Potri.001G362400(BS)	POPTR_0001s36420	sp|O22307|C71DB_LOTJA	Cytochrome P450 71D11 (Fragment) OS=Lotus japonicus GN=CYP71D11 PE=2 SV=1	AT3G26210.1	| Symbols: CYP71B23 | cytochrome P450, family 71, subfamily B, polypeptide 23 | chr3:9593329-9595202 REVERSE LENGTH=501	LOC_Os02g09200.1	protein|cytochrome P450 71D10, putative, expressed	IMGA|Medtr5g094570.1	Cytochrome P450 71D10 chr5 40297710-40299564 E EGN_Mt100125 20111014	GO:0002237|response to molecule of bacterial origin GO:0009617|response to bacterium GO:0009627|systemic acquired resistance GO:0031347|regulation of defense response GO:0045087|innate immune response GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	NA
pt2_03753	A	A11S	Potri.001G363000	Potri.001G363000(AS) Potri.001G365300(BS) Potri.001G363900(BS) Potri.001G362600(BS) Potri.001G365400(BS) Potri.001G362500(BS) Potri.001G363100(BS) Potri.001G362800(BS) Potri.001G364900(BS) Potri.001G364600(BS) Potri.001G365100(BS)	POPTR_0001s36430	sp|O48923|C71DA_SOYBN	Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 PE=2 SV=1	AT3G26230.1	| Symbols: CYP71B24 | cytochrome P450, family 71, subfamily B, polypeptide 24 | chr3:9598200-9599892 REVERSE LENGTH=498	LOC_Os03g39650.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g094550.1	Cytochrome P450 chr5 40288757-40290756 E EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	NA
pt2_03754	A	A12S	Potri.001G362800	Potri.001G362800(AS) Potri.001G363800(BS) Potri.001G363000(BS) Potri.001G363900(BS) Potri.001G362600(BS) Potri.001G365400(BS) Potri.001G362500(BS) Potri.001G363100(BS) Potri.001G364900(BS) Potri.001G364600(BS) Potri.001G365100(BS) Potri.001G365300(DS)	POPTR_0001s36440	sp|A6YIH8|C7D55_HYOMU	Premnaspirodiene oxygenase OS=Hyoscyamus muticus GN=CYP71D55 PE=1 SV=1	AT5G25120.1	| Symbols: CYP71B11 | ytochrome p450, family 71, subfamily B, polypeptide 11 | chr5:8662851-8664432 FORWARD LENGTH=496	LOC_Os02g09220.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g094550.1	Cytochrome P450 chr5 40288757-40290756 E EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	NA
pt2_03755	A	A2S	Potri.001G363300	Potri.001G363300(AS) Potri.011G008400(BS)	POPTR_0001s36450	NA	NA	AT5G36930.1	| Symbols: | Disease resistance protein (TIR-NBS-LRR class) family | chr5:14567771-14571907 REVERSE LENGTH=1188	NA	NA	IMGA|contig_97121_1.1	Tir-nbs-lrr resistance protein contig_97121 1675-127 H PREDN 20111014	GO:0006952|defense response GO:0007165|signal transduction	GO:0043531|ADP binding	GO:0005622|intracellular GO:0005737|cytoplasm
pt2_03756	B	B1S	Potri.011G008600	Potri.011G008600(BS)	POPTR_0001s36455	sp|Q40392|TMVRN_NICGU	TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1	AT5G36930.1	| Symbols: | Disease resistance protein (TIR-NBS-LRR class) family | chr5:14567771-14571907 REVERSE LENGTH=1188	LOC_Os11g12340.2	protein|disease resistance protein RPM1, putative, expressed	IMGA|contig_62367_1.1	TIR-NBS disease resistance-like protein contig_62367 389-4897 H PREDN 20111014	GO:0006952|defense response GO:0007165|signal transduction	GO:0043531|ADP binding	GO:0005622|intracellular GO:0005737|cytoplasm GO:0009506|plasmodesma GO:0009507|chloroplast
pt2_03757	A	A2S	Potri.001G364700	Potri.001G364700(AS) Potri.001G363700(BS)	POPTR_0001s36460	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006952|defense response	GO:0043531|ADP binding	GO:0005634|nucleus
pt2_03758	C	C2S	Potri.001G363800	Potri.001G363800(CS) Potri.001G364900(CS)	sp|O81971|C71D9_SOYBN	Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=2 SV=1	AT5G25120.1	| Symbols: CYP71B11 | ytochrome p450, family 71, subfamily B, polypeptide 11 | chr5:8662851-8664432 FORWARD LENGTH=496	LOC_Os09g10340.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g094550.1	Cytochrome P450 chr5 40288757-40290756 E EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	NA
pt2_03759	A	A12A	Potri.001G365300	Potri.001G365300(AA) Potri.001G363800(AA) Potri.001G363600(AA) Potri.001G362800(AA) Potri.001G364900(AA) Potri.001G364600(AA) Potri.001G365100(AA) Potri.001G363900(BA) Potri.001G362600(BA) Potri.001G365400(BA) Potri.001G362500(BA) Potri.001G363100(BA)	POPTR_0001s36480	sp|A6YIH8|C7D55_HYOMU	Premnaspirodiene oxygenase OS=Hyoscyamus muticus GN=CYP71D55 PE=1 SV=1	AT3G26300.1	| Symbols: CYP71B34 | cytochrome P450, family 71, subfamily B, polypeptide 34 | chr3:9639199-9640866 REVERSE LENGTH=500	LOC_Os09g10340.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g094550.1	Cytochrome P450 chr5 40288757-40290756 E EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	NA
pt2_03760	A	A1S	Potri.001G355000	Potri.001G355000(AS)	POPTR_0001s36490	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03761	A	A1S	Potri.001G355100	Potri.001G355100(AS)	POPTR_0001s36500	sp|Q39224|SRG1_ARATH	Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1	AT1G17020.1	| Symbols: SRG1, ATSRG1 | senescence-related gene 1 | chr1:5820258-5821741 FORWARD LENGTH=358	LOC_Os10g40880.1	protein|flavonol synthase/flavanone 3-hydroxylase, putative, expressed	IMGA|Medtr5g055680.1	Protein SRG1 chr5 22384306-22387839 F EGN_Mt100125 20111014	GO:0009737|response to abscisic acid stimulus GO:0009793|embryo development ending in seed dormancy GO:0009813|flavonoid biosynthetic process GO:0009830|cell wall modification involved in abscission GO:0009845|seed germination GO:0010162|seed dormancy process GO:0010260|organ senescence GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity GO:0016682|oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_03762	A	A1S	Potri.001G355100	Potri.001G355100(AS)	POPTR_0001s36510	sp|Q39224|SRG1_ARATH	Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1	AT1G17020.1	| Symbols: SRG1, ATSRG1 | senescence-related gene 1 | chr1:5820258-5821741 FORWARD LENGTH=358	LOC_Os10g40880.1	protein|flavonol synthase/flavanone 3-hydroxylase, putative, expressed	IMGA|Medtr5g055680.1	Protein SRG1 chr5 22384306-22387839 F EGN_Mt100125 20111014	GO:0009737|response to abscisic acid stimulus GO:0009793|embryo development ending in seed dormancy GO:0009813|flavonoid biosynthetic process GO:0009830|cell wall modification involved in abscission GO:0009845|seed germination GO:0010162|seed dormancy process GO:0010260|organ senescence GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity GO:0016682|oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_03763	A	A1S	Potri.001G355200	Potri.001G355200(AS)	POPTR_0001s36520	sp|Q39224|SRG1_ARATH	Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1	AT1G17020.1	| Symbols: SRG1, ATSRG1 | senescence-related gene 1 | chr1:5820258-5821741 FORWARD LENGTH=358	LOC_Os10g41020.1	protein|flavonol synthase/flavanone 3-hydroxylase, putative, expressed	IMGA|Medtr5g055680.1	Protein SRG1 chr5 22384306-22387839 F EGN_Mt100125 20111014	GO:0009737|response to abscisic acid stimulus GO:0009793|embryo development ending in seed dormancy GO:0009813|flavonoid biosynthetic process GO:0009830|cell wall modification involved in abscission GO:0009845|seed germination GO:0010162|seed dormancy process GO:0010260|organ senescence GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity GO:0016682|oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_03764	D	D1S	Potri.001G355300	Potri.001G355300(DS)	POPTR_0001s36530	sp|Q9LS28|GTE12_ARATH	Transcription factor GTE12 OS=Arabidopsis thaliana GN=GTE12 PE=2 SV=2	AT5G46550.1	| Symbols: | DNA-binding bromodomain-containing protein | chr5:18884439-18886503 REVERSE LENGTH=494	LOC_Os07g32420.3	protein|bromodomain domain containing protein, expressed	IMGA|contig_166847_1.1	Bromodomain protein-like protein contig_166847 889-2214 H PREDN 20111014	NA	GO:0003677|DNA binding	GO:0005634|nucleus
pt2_03765	A	A2S	Potri.001G355400	Potri.001G355400(AS) Potri.009G006300(DS)	POPTR_0001s36540	NA	NA	AT5G41980.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:16793765-16794889 FORWARD LENGTH=374	LOC_Os12g07770.1	protein|retrotransposon protein, putative, unclassified, expressed	NA	NA	NA	GO:0003674|molecular_function GO:0016788|hydrolase activity, acting on ester bonds	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03766	A	A1S	Potri.001G355500	Potri.001G355500(AS)	POPTR_0001s36550	sp|Q9LH79|SWET2_ARATH	Bidirectional sugar transporter SWEET2 OS=Arabidopsis thaliana GN=SWEET2 PE=2 SV=1	AT3G14770.1	| Symbols: SWEET2, AtSWEET2 | Nodulin MtN3 family protein | chr3:4957787-4959202 REVERSE LENGTH=236	LOC_Os01g36070.1	protein|nodulin MtN3 family protein, putative, expressed	IMGA|Medtr5g067530.1	Protein RUPTURED POLLEN GRAIN chr5 27562869-27565164 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function GO:0051119|sugar transmembrane transporter activity	GO:0005886|plasma membrane GO:0005887|integral to plasma membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_03767	A	A1S	Potri.001G355600	Potri.001G355600(AS)	POPTR_0001s36560	sp|Q8RWE8|GGAP1_ARATH	GDP-L-galactose phosphorylase 1 OS=Arabidopsis thaliana GN=VTC2 PE=1 SV=1	AT4G26850.1	| Symbols: VTC2 | mannose-1-phosphate guanylyltransferase (GDP)s;GDP-galactose:mannose-1-phosphate guanylyltransferases;GDP-galactose:glucose-1-phosphate guanylyltransferases;GDP-galactose:myoinositol-1- phosphate guanylyltransferases;glucose-1-phosphate guanylyltransferase | chr4:13499262-13501145 REVERSE LENGTH=442	LOC_Os12g08810.1	protein|VTC2, putative, expressed	IMGA|Medtr5g093390.1	hypothetical protein chr5 39732801-39730517 F EGN_Mt100125 20111014	GO:0009408|response to heat GO:0009753|response to jasmonic acid stimulus GO:0019853|L-ascorbic acid biosynthetic process GO:0042742|defense response to bacterium GO:0052544|defense response by callose deposition in cell wall	GO:0008928|mannose-1-phosphate guanylyltransferase (GDP) activity GO:0010471|GDP-galactose:mannose-1-phosphate guanylyltransferase activity GO:0010472|GDP-galactose:glucose-1-phosphate guanylyltransferase activity GO:0010473|GDP-galactose:myoinositol-1-phosphate guanylyltransferase activity GO:0010474|glucose-1-phosphate guanylyltransferase (GDP) activity GO:0010475|galactose-1-phosphate guanylyltransferase (GDP) activity GO:0080046|quercetin 4'-O-glucosyltransferase activity GO:0080048|GDP-D-glucose phosphorylase activity	GO:0005634|nucleus
pt2_03768	A	A1S	Potri.001G355700	Potri.001G355700(AS)	POPTR_0001s36570	NA	NA	AT1G50650.1	| Symbols: | Stigma-specific Stig1 family protein | chr1:18763773-18764297 REVERSE LENGTH=174	LOC_Os01g14540.1	protein|STIGL1 - Stigma-specific Stig1 family protein precursor, expressed	IMGA|Medtr5g063040.1	hypothetical protein chr5 25413625-25413137 H EGN_Mt100125 20111014	GO:0008150|biological_process GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_03769	B	B1S	Potri.001G355800	Potri.001G355800(BS)	POPTR_0001s36580	sp|Q9ZNW0|MOCS3_ARATH	Adenylyltransferase and sulfurtransferase MOCS3 OS=Arabidopsis thaliana GN=MOCS3 PE=2 SV=1	AT5G55130.1	| Symbols: CNX5, SIR1 | co-factor for nitrate, reductase and xanthine dehydrogenase 5 | chr5:22373374-22376028 REVERSE LENGTH=464	LOC_Os02g32460.1	protein|ThiF family domain containing protein, putative, expressed	IMGA|Medtr5g093580.1	Adenylyltransferase and sulfurtransferase MOCS3 chr5 39826495-39821997 E EGN_Mt100125 20111014	NA	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0008265|Mo-molybdopterin cofactor sulfurase activity	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_03770	A	A1S	Potri.001G356000	Potri.001G356000(AS)	POPTR_0001s36600	sp|O48766|GUN11_ARATH	Endoglucanase 11 OS=Arabidopsis thaliana GN=At2g32990 PE=2 SV=1	AT2G32990.1	| Symbols: AtGH9B8, GH9B8 | glycosyl hydrolase 9B8 | chr2:14003361-14005844 FORWARD LENGTH=525	LOC_Os02g50490.1	protein|endoglucanase, putative, expressed	IMGA|Medtr5g085730.1	Endoglucanase chr5 36028973-36032829 E EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0005576|extracellular region
pt2_03771	A	A1S	Potri.001G356100	Potri.001G356100(AS)	POPTR_0001s36610	sp|O80339|ERF82_ARATH	Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana GN=ERF3 PE=1 SV=1	AT1G50640.1	| Symbols: ERF3, ATERF3 | ethylene responsive element binding factor 3 | chr1:18757602-18758279 REVERSE LENGTH=225	LOC_Os04g57340.1	protein|AP2 domain containing protein, expressed	IMGA|Medtr5g085070.1	Ethylene responsive transcription factor chr5 35698759-35697527 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009414|response to water deprivation GO:0009737|response to abscisic acid stimulus GO:0010105|negative regulation of ethylene mediated signaling pathway GO:0042538|hyperosmotic salinity response GO:0045892|negative regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_03772	A	A1S	Potri.001G356200	Potri.001G356200(AS)	POPTR_0001s36620	NA	NA	AT3G20300.1	| Symbols: | Protein of unknown function (DUF3537) | chr3:7079832-7081809 REVERSE LENGTH=452	LOC_Os06g42850.1	protein|extracellular ligand-gated ion channel, putative, expressed	IMGA|Medtr1g009230.1	hypothetical protein chr1 1857207-1854921 H EGN_Mt100125 20111014	GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009737|response to abscisic acid stimulus GO:0042538|hyperosmotic salinity response	NA	GO:0005739|mitochondrion
pt2_03773	A	A1S	Potri.001G356300	Potri.001G356300(AS)	POPTR_0001s36630	sp|Q5E9R3|EHD1_BOVIN	EH domain-containing protein 1 OS=Bos taurus GN=EHD1 PE=2 SV=1	AT3G20290.2	| Symbols: ATEHD1, EHD1 | EPS15 homology domain 1 | chr3:7075057-7078655 REVERSE LENGTH=545	LOC_Os06g47330.1	protein|dynamin family protein, putative, expressed	IMGA|Medtr5g093720.1	EH-domain-containing protein chr5 39879354-39885001 F EGN_Mt100125 20111014	GO:0006623|protein targeting to vacuole GO:0006897|endocytosis GO:0006944|cellular membrane fusion GO:0016192|vesicle-mediated transport GO:0048193|Golgi vesicle transport	GO:0003924|GTPase activity GO:0005509|calcium ion binding GO:0005525|GTP binding	GO:0005737|cytoplasm GO:0005768|endosome GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane GO:0043231|intracellular membrane-bounded organelle
pt2_03774	A	A1S	Potri.001G356400	Potri.001G356400(AS)	POPTR_0001s36640	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_03775	A	A1S	Potri.001G356500	Potri.001G356500(AS)	POPTR_0001s36650	sp|Q9FLP0|MA651_ARATH	65-kDa microtubule-associated protein 1 OS=Arabidopsis thaliana GN=MAP65-1 PE=1 SV=1	AT5G55230.1	| Symbols: ATMAP65-1, MAP65-1 | microtubule-associated proteins 65-1 | chr5:22402716-22405182 FORWARD LENGTH=587	LOC_Os06g20370.1	protein|microtubule associated protein, putative, expressed	IMGA|Medtr5g093860.1	Microtubule-associated protein MAP65-1a chr5 39942422-39947104 E EGN_Mt100125 20111014	GO:0000272|polysaccharide catabolic process GO:0001578|microtubule bundle formation GO:0005982|starch metabolic process GO:0007020|microtubule nucleation GO:0008283|cell proliferation GO:0009664|plant-type cell wall organization GO:0019344|cysteine biosynthetic process GO:0030244|cellulose biosynthetic process GO:0031116|positive regulation of microtubule polymerization GO:0043622|cortical microtubule organization GO:0046785|microtubule polymerization GO:0048193|Golgi vesicle transport GO:0048528|post-embryonic root development GO:0051302|regulation of cell division	GO:0005515|protein binding GO:0008017|microtubule binding GO:0046983|protein dimerization activity	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005819|spindle GO:0005829|cytosol GO:0005874|microtubule GO:0009524|phragmoplast GO:0009574|preprophase band GO:0010005|cortical microtubule, transverse to long axis GO:0055028|cortical microtubule
pt2_03776	A	A1S	Potri.001G356600	Potri.001G356600(AS)	POPTR_0001s36660	NA	NA	AT1G50720.1	| Symbols: | Stigma-specific Stig1 family protein | chr1:18789180-18789644 REVERSE LENGTH=154	LOC_Os01g14540.1	protein|STIGL1 - Stigma-specific Stig1 family protein precursor, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_03777	A	A1S	Potri.001G356700	Potri.001G356700(AS)	POPTR_0001s36670	sp|A4VCH4|CP062_DANRE	UPF0505 protein C16orf62 homolog OS=Danio rerio GN=zgc:163107 PE=2 SV=1	AT1G50730.1	| Symbols: | unknown protein; Has 218 Blast hits to 209 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 141; Fungi - 2; Plants - 33; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). | chr1:18795275-18802098 FORWARD LENGTH=923	NA	NA	NA	NA	GO:0042732|D-xylose metabolic process	NA	NA
pt2_03778	A	A1S	Potri.001G356700	Potri.001G356700(AS)	POPTR_0001s36680	sp|A4VCH4|CP062_DANRE	UPF0505 protein C16orf62 homolog OS=Danio rerio GN=zgc:163107 PE=2 SV=1	AT1G50730.1	| Symbols: | unknown protein; Has 218 Blast hits to 209 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 141; Fungi - 2; Plants - 33; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). | chr1:18795275-18802098 FORWARD LENGTH=923	NA	NA	NA	NA	GO:0042732|D-xylose metabolic process	NA	NA
pt2_03779	A	A1S	Potri.001G356800	Potri.001G356800(AS)	POPTR_0001s36690	NA	NA	AT5G55100.2	| Symbols: | SWAP (Suppressor-of-White-APricot)/surp domain-containing protein | chr5:22361401-22364664 REVERSE LENGTH=844	LOC_Os01g50320.1	protein|surp module family protein, putative, expressed	IMGA|Medtr5g093560.1	hypothetical protein chr5 39809400-39815467 E EGN_Mt100125 20111014	GO:0006396|RNA processing	GO:0003723|RNA binding	GO:0005634|nucleus
pt2_03780	A	A1S	Potri.001G356900	Potri.001G356900(AS)	POPTR_0001s36700	sp|Q42456|ASPR1_ORYSJ	Aspartic proteinase oryzasin-1 OS=Oryza sativa subsp. japonica GN=Os05g0567100 PE=2 SV=2	AT1G11910.1	| Symbols: APA1, ATAPA1 | aspartic proteinase A1 | chr1:4017119-4019874 REVERSE LENGTH=506	LOC_Os05g49200.2	protein|aspartic proteinase oryzasin-1 precursor, putative, expressed	NA	NA	GO:0006096|glycolysis GO:0006508|proteolysis GO:0006623|protein targeting to vacuole GO:0006629|lipid metabolic process GO:0006833|water transport GO:0006972|hyperosmotic response GO:0007030|Golgi organization GO:0009266|response to temperature stimulus GO:0009651|response to salt stress GO:0046686|response to cadmium ion GO:0048513|organ development	GO:0004175|endopeptidase activity GO:0004190|aspartic-type endopeptidase activity	GO:0005576|extracellular region GO:0005773|vacuole GO:0005829|cytosol GO:0009506|plasmodesma
pt2_03781	A	A1S	Potri.001G357000	Potri.001G357000(AS)	POPTR_0001s36710	sp|Q8H107|ODO2B_ARATH	Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 2, mitochondrial OS=Arabidopsis thaliana GN=At4g26910 PE=1 SV=2	AT4G26910.1	| Symbols: | Dihydrolipoamide succinyltransferase | chr4:13520127-13522889 REVERSE LENGTH=464	LOC_Os04g32330.2	protein|dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial precursor, putative, expressed	IMGA|Medtr5g093300.1	Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex chr5 39691667-39698807 F EGN_Mt100125 20111014	GO:0006099|tricarboxylic acid cycle GO:0008152|metabolic process GO:0009627|systemic acquired resistance GO:0034976|response to endoplasmic reticulum stress	GO:0004149|dihydrolipoyllysine-residue succinyltransferase activity GO:0008270|zinc ion binding GO:0016746|transferase activity, transferring acyl groups	GO:0005739|mitochondrion GO:0016020|membrane GO:0045252|oxoglutarate dehydrogenase complex
pt2_03782	A	A1S	Potri.001G357100	Potri.001G357100(AS)	POPTR_0001s36720	sp|Q9S9Q9|Y1044_ARATH	BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana GN=At1g30440 PE=1 SV=2	AT1G30440.1	| Symbols: | Phototropic-responsive NPH3 family protein | chr1:10759475-10762199 FORWARD LENGTH=665	LOC_Os03g43990.1	protein|BTBN8 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed	IMGA|Medtr5g015790.1	BTB/POZ domain-containing protein chr5 5273733-5277633 E EGN_Mt100125 20111014	GO:0009416|response to light stimulus	GO:0004871|signal transducer activity	GO:0005886|plasma membrane
pt2_03783	A	A1S	Potri.001G357200	Potri.001G357200(AS)	POPTR_0001s36730	sp|Q43087|PYRB2_PEA	Aspartate carbamoyltransferase 2, chloroplastic OS=Pisum sativum GN=PYRB2 PE=2 SV=1	AT3G20330.1	| Symbols: PYRB | PYRIMIDINE B | chr3:7090354-7091904 REVERSE LENGTH=390	LOC_Os08g15030.1	protein|aspartate carbamoyltransferase, putative, expressed	IMGA|Medtr5g093570.1	Aspartate carbamoyltransferase chr5 39817257-39820854 E EGN_Mt100125 20111014	GO:0006164|purine nucleotide biosynthetic process GO:0006207|'de novo' pyrimidine nucleobase biosynthetic process GO:0006520|cellular amino acid metabolic process GO:0009220|pyrimidine ribonucleotide biosynthetic process GO:0016036|cellular response to phosphate starvation	GO:0004070|aspartate carbamoyltransferase activity GO:0005515|protein binding GO:0016597|amino acid binding GO:0016743|carboxyl- or carbamoyltransferase activity	GO:0005829|cytosol GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_03784	A	A1A	Potri.001G357200	Potri.001G357200(AA)	POPTR_0001s36740	sp|Q43087|PYRB2_PEA	Aspartate carbamoyltransferase 2, chloroplastic OS=Pisum sativum GN=PYRB2 PE=2 SV=1	AT3G20330.1	| Symbols: PYRB | PYRIMIDINE B | chr3:7090354-7091904 REVERSE LENGTH=390	LOC_Os08g15030.1	protein|aspartate carbamoyltransferase, putative, expressed	IMGA|Medtr5g093570.1	Aspartate carbamoyltransferase chr5 39817257-39820854 E EGN_Mt100125 20111014	GO:0006164|purine nucleotide biosynthetic process GO:0006207|'de novo' pyrimidine nucleobase biosynthetic process GO:0006520|cellular amino acid metabolic process GO:0009220|pyrimidine ribonucleotide biosynthetic process GO:0016036|cellular response to phosphate starvation	GO:0004070|aspartate carbamoyltransferase activity GO:0005515|protein binding GO:0016597|amino acid binding GO:0016743|carboxyl- or carbamoyltransferase activity	GO:0005829|cytosol GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_03785	A	A2S	Potri.001G357300	Potri.001G357300(AS) Potri.011G090900(DS)	POPTR_0001s36750	sp|Q2UVJ5|CCC1_ARATH	Cation-chloride cotransporter 1 OS=Arabidopsis thaliana GN=CCC1 PE=1 SV=1	AT1G30450.2	| Symbols: CCC1, ATCCC1, HAP5 | cation-chloride co-transporter 1 | chr1:10762905-10769061 FORWARD LENGTH=975	LOC_Os08g23440.1	protein|amino acid permease family protein, putative, expressed	NA	NA	GO:0006810|transport GO:0006811|ion transport GO:0006812|cation transport GO:0055085|transmembrane transport	GO:0008511|sodium:potassium:chloride symporter activity GO:0015377|cation:chloride symporter activity	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0005886|plasma membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_03786	B	B2S	Potri.013G083900	Potri.013G083900(BS) Potri.001G357400(BS)	POPTR_0001s36760	sp|P08770|TRA1_MAIZE	Putative AC transposase OS=Zea mays PE=2 SV=2	AT3G42170.1	| Symbols: | BED zinc finger ;hAT family dimerisation domain | chr3:14321838-14323928 FORWARD LENGTH=696	LOC_Os11g39940.1	protein|transposon protein, putative, unclassified, expressed	IMGA|Medtr5g088330.1	Oligoribonuclease chr5 37283827-37298839 E EGN_Mt100125 20111014	GO:0009791|post-embryonic development	GO:0003677|DNA binding GO:0046983|protein dimerization activity	GO:0005634|nucleus GO:0005829|cytosol
pt2_03787	C	C1S	Potri.001G357600	Potri.001G357600(CS)	sp|Q2UVJ5|CCC1_ARATH	Cation-chloride cotransporter 1 OS=Arabidopsis thaliana GN=CCC1 PE=1 SV=1	AT1G30450.2	| Symbols: CCC1, ATCCC1, HAP5 | cation-chloride co-transporter 1 | chr1:10762905-10769061 FORWARD LENGTH=975	LOC_Os08g23440.1	protein|amino acid permease family protein, putative, expressed	NA	NA	GO:0006810|transport GO:0006811|ion transport GO:0006812|cation transport GO:0055085|transmembrane transport	GO:0008511|sodium:potassium:chloride symporter activity GO:0015377|cation:chloride symporter activity	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0005886|plasma membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_03788	A	A1S	Potri.001G357600	Potri.001G357600(AS)	POPTR_0001s36780	sp|Q2UVJ5|CCC1_ARATH	Cation-chloride cotransporter 1 OS=Arabidopsis thaliana GN=CCC1 PE=1 SV=1	AT1G30450.2	| Symbols: CCC1, ATCCC1, HAP5 | cation-chloride co-transporter 1 | chr1:10762905-10769061 FORWARD LENGTH=975	LOC_Os08g23440.1	protein|amino acid permease family protein, putative, expressed	NA	NA	GO:0006810|transport GO:0006811|ion transport GO:0006812|cation transport GO:0055085|transmembrane transport	GO:0008511|sodium:potassium:chloride symporter activity GO:0015377|cation:chloride symporter activity	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0005886|plasma membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_03789	A	A2S	Potri.001G357700	Potri.001G357700(AS) Potri.011G090200(DS)	POPTR_0001s36800	NA	NA	AT2G34680.1	| Symbols: AIR9 | Outer arm dynein light chain 1 protein | chr2:14616947-14628300 REVERSE LENGTH=1708	LOC_Os07g05470.1	protein|AIR9 protein, putative, expressed	NA	NA	GO:0007155|cell adhesion GO:0009733|response to auxin stimulus GO:0010014|meristem initiation GO:0010090|trichome morphogenesis GO:0010102|lateral root morphogenesis GO:0016049|cell growth GO:0045010|actin nucleation GO:0045595|regulation of cell differentiation GO:0048589|developmental growth GO:0048765|root hair cell differentiation GO:0071555|cell wall organization	NA	GO:0005634|nucleus GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_03790	A	A1S	Potri.001G357800	Potri.001G357800(AS)	POPTR_0001s36810	sp|A9LNK9|CPSF_ARATH	Cleavage and polyadenylation specificity factor CPSF30 OS=Arabidopsis thaliana GN=CPSF30 PE=1 SV=1	AT1G30460.1	| Symbols: CPSF30, ATCPSF30 | cleavage and polyadenylation specificity factor 30 | chr1:10771469-10775323 REVERSE LENGTH=631	LOC_Os06g46400.1	protein|ATCPSF30/CPSF30, putative, expressed	NA	NA	GO:0006378|mRNA polyadenylation GO:0006396|RNA processing GO:0006397|mRNA processing GO:0006979|response to oxidative stress GO:1900363|regulation of mRNA polyadenylation	GO:0003676|nucleic acid binding GO:0003723|RNA binding GO:0004519|endonuclease activity GO:0004521|endoribonuclease activity GO:0005515|protein binding GO:0005516|calmodulin binding GO:0008270|zinc ion binding	GO:0005634|nucleus GO:0005847|mRNA cleavage and polyadenylation specificity factor complex
pt2_03791	A	A1S	Potri.001G357900	Potri.001G357900(AS)	POPTR_0001s36830	sp|Q9M0V3|DDB1A_ARATH	DNA damage-binding protein 1a OS=Arabidopsis thaliana GN=DDB1A PE=1 SV=1	AT4G05420.1	| Symbols: DDB1A | damaged DNA binding protein 1A | chr4:2746288-2752663 FORWARD LENGTH=1088	LOC_Os05g51480.1	protein|cleavage and polyadenylation specificity factor, putative, expressed	NA	NA	GO:0003002|regionalization GO:0006281|DNA repair GO:0006486|protein glycosylation GO:0007155|cell adhesion GO:0008284|positive regulation of cell proliferation GO:0009630|gravitropism GO:0009639|response to red or far red light GO:0010090|trichome morphogenesis GO:0010100|negative regulation of photomorphogenesis GO:0033043|regulation of organelle organization GO:0045010|actin nucleation GO:0045892|negative regulation of transcription, DNA-dependent GO:0048449|floral organ formation GO:0048608|reproductive structure development	GO:0003676|nucleic acid binding GO:0003677|DNA binding GO:0005515|protein binding	GO:0005634|nucleus GO:0005829|cytosol GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_03792	A	A1S	Potri.001G358000	Potri.001G358000(AS)	POPTR_0001s36835	NA	NA	AT4G03620.1	| Symbols: | myosin heavy chain-related | chr4:1607040-1608665 REVERSE LENGTH=342	NA	NA	NA	NA	GO:0009827|plant-type cell wall modification GO:0009860|pollen tube growth GO:0010583|response to cyclopentenone GO:0048610|cellular process involved in reproduction GO:0048868|pollen tube development	GO:0003674|molecular_function	GO:0005737|cytoplasm
pt2_03793	A	A1S	Potri.001G358100	Potri.001G358100(AS)	POPTR_0001s36840	sp|Q8RXD4|BRCA1_ARATH	Protein BREAST CANCER SUSCEPTIBILITY 1 homolog OS=Arabidopsis thaliana GN=BRCA1 PE=2 SV=1	AT4G21070.1	| Symbols: ATBRCA1, BRCA1 | breast cancer susceptibility1 | chr4:11248174-11252633 FORWARD LENGTH=941	LOC_Os05g43610.1	protein|ATBARD1/BARD1, putative, expressed	NA	NA	GO:0006281|DNA repair GO:0006302|double-strand break repair GO:0006310|DNA recombination GO:0010332|response to gamma radiation	GO:0003677|DNA binding GO:0004842|ubiquitin-protein ligase activity GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_03794	A	A1S	Potri.001G358200	Potri.001G358200(AS)	POPTR_0001s36850	sp|Q9LYP4|BAG3_ARATH	BAG family molecular chaperone regulator 3 OS=Arabidopsis thaliana GN=BAG3 PE=1 SV=1	AT5G07220.1	| Symbols: ATBAG3, BAG3 | BCL-2-associated athanogene 3 | chr5:2265545-2266720 REVERSE LENGTH=303	LOC_Os04g52890.1	protein|ATBAG1, putative, expressed	IMGA|contig_48397_1.1	Protein binding protein contig_48397 106-3094 F PREDN 20111014	GO:0006301|postreplication repair GO:0006816|calcium ion transport	GO:0051087|chaperone binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03795	C	C1S	Potri.001G358200	Potri.001G358200(CS)	sp|Q9LYP4|BAG3_ARATH	BAG family molecular chaperone regulator 3 OS=Arabidopsis thaliana GN=BAG3 PE=1 SV=1	AT5G07220.1	| Symbols: ATBAG3, BAG3 | BCL-2-associated athanogene 3 | chr5:2265545-2266720 REVERSE LENGTH=303	LOC_Os04g52890.1	protein|ATBAG1, putative, expressed	IMGA|contig_48397_1.1	Protein binding protein contig_48397 106-3094 F PREDN 20111014	GO:0006301|postreplication repair GO:0006816|calcium ion transport	GO:0051087|chaperone binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03796	A	A1S	Potri.001G358300	Potri.001G358300(AS)	POPTR_0001s36870	sp|Q09809|YAB9_SCHPO	Uncharacterized membrane protein C2G11.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC2G11.09 PE=2 SV=2	AT1G30360.1	| Symbols: ERD4 | Early-responsive to dehydration stress protein (ERD4) | chr1:10715892-10718799 FORWARD LENGTH=724	LOC_Os07g05570.1	protein|ERD4 protein, putative, expressed	IMGA|Medtr5g027510.1	"Membrane protein, putative" chr5 11212999-11207479 E EGN_Mt100125 20111014	NA	NA	GO:0005576|extracellular region GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0009507|chloroplast GO:0009941|chloroplast envelope GO:0016020|membrane
pt2_03797	A	A1S	Potri.001G358400	Potri.001G358400(AS)	POPTR_0001s36880	NA	NA	AT2G34640.1	| Symbols: PTAC12, HMR | plastid transcriptionally active 12 | chr2:14582061-14584345 REVERSE LENGTH=527	LOC_Os01g56350.3	protein|PTAC12, putative, expressed	NA	NA	GO:0008283|cell proliferation GO:0042793|transcription from plastid promoter GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003674|molecular_function	GO:0005634|nucleus GO:0009295|nucleoid GO:0009507|chloroplast GO:0009508|plastid chromosome
pt2_03798	A	A1S	Potri.001G358500	Potri.001G358500(AS)	POPTR_0001s36900	sp|Q2QM84|ARFY_ORYSJ	Auxin response factor 25 OS=Oryza sativa subsp. japonica GN=ARF25 PE=2 SV=1	AT1G30330.1	| Symbols: ARF6 | auxin response factor 6 | chr1:10686125-10690036 REVERSE LENGTH=933	LOC_Os12g41950.1	protein|auxin response factor, putative, expressed	IMGA|Medtr5g076270.1	Auxin response factor chr5 31499972-31490689 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009725|response to hormone stimulus GO:0009733|response to auxin stimulus GO:0009855|determination of bilateral symmetry GO:0009886|post-embryonic morphogenesis GO:0009887|organ morphogenesis GO:0009908|flower development GO:0009909|regulation of flower development GO:0010014|meristem initiation GO:0010051|xylem and phloem pattern formation GO:0010073|meristem maintenance GO:0010154|fruit development GO:0048439|flower morphogenesis GO:0048481|ovule development GO:0048507|meristem development GO:0048519|negative regulation of biological process	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_03799	A	A1S	Potri.001G358600	Potri.001G358600(AS)	POPTR_0001s36910	NA	NA	AT1G30320.1	| Symbols: | Remorin family protein | chr1:10680348-10682852 FORWARD LENGTH=509	LOC_Os04g52920.1	protein|remorin family protein, putative, expressed	NA	NA	NA	GO:0003677|DNA binding	GO:0005737|cytoplasm GO:0005886|plasma membrane
pt2_03800	A	A2S	Potri.001G358700	Potri.001G358700(AS) Potri.011G092200(BS)	POPTR_0001s36920	sp|P48528|PPX2_ARATH	Serine/threonine-protein phosphatase PP-X isozyme 2 OS=Arabidopsis thaliana GN=PPX2 PE=2 SV=2	AT5G55260.1	| Symbols: PPX2, PPX-2 | protein phosphatase X 2 | chr5:22416808-22418621 FORWARD LENGTH=305	LOC_Os09g11230.1	protein|Ser/Thr protein phosphatase family protein, putative, expressed	IMGA|Medtr5g093990.1	Serine/threonine protein phosphatase chr5 40021795-40016499 F EGN_Mt100125 20111014	NA	GO:0004722|protein serine/threonine phosphatase activity GO:0016787|hydrolase activity	GO:0005575|cellular_component
pt2_03801	A	A1S	Potri.001G358800	Potri.001G358800(AS)	POPTR_0001s36930	sp|Q9MAU5|Y1049_ARATH	Putative BPI/LBP family protein At1g04970 OS=Arabidopsis thaliana GN=At1g04970 PE=2 SV=1	AT1G04970.1	| Symbols: | lipid-binding serum glycoprotein family protein | chr1:1411216-1413431 FORWARD LENGTH=488	LOC_Os09g30474.1	protein|BPI/LBP family protein At3g20270 precursor, putative, expressed	IMGA|Medtr5g093980.1	Bactericidal permeability-increasing protein chr5 40014832-40010536 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0008289|lipid binding	GO:0005576|extracellular region GO:0005773|vacuole GO:0005774|vacuolar membrane
pt2_03802	A	A1S	Potri.001G358900	Potri.001G358900(AS)	POPTR_0001s36940	sp|Q5PNS0|Y3228_ARATH	PHD finger protein At3g20280 OS=Arabidopsis thaliana GN=At3g20280 PE=2 SV=1	AT1G50620.1	| Symbols: | RING/FYVE/PHD zinc finger superfamily protein | chr1:18748537-18751005 FORWARD LENGTH=629	LOC_Os06g20410.1	protein|BAH domain containing protein, expressed	IMGA|Medtr5g093940.1	PHD finger protein chr5 39990774-39980464 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_03803	A	A1S	Potri.001G359000	Potri.001G359000(AS)	POPTR_0001s36950	sp|Q9FLN8|IAMT1_ARATH	Indole-3-acetate O-methyltransferase 1 OS=Arabidopsis thaliana GN=IAMT1 PE=1 SV=1	AT5G55250.1	| Symbols: IAMT1 | IAA carboxylmethyltransferase 1 | chr5:22407589-22410854 REVERSE LENGTH=386	LOC_Os04g56950.1	protein|jasmonate O-methyltransferase, putative, expressed	IMGA|Medtr5g093900.1	S-adenosyl-L-methionine salicylic acid carboxyl methyltransferase-like protein chr5 39964956-39960034 E EGN_Mt100125 20111014	GO:0009944|polarity specification of adaxial/abaxial axis GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process	GO:0000287|magnesium ion binding GO:0008168|methyltransferase activity GO:0008757|S-adenosylmethionine-dependent methyltransferase activity GO:0042802|identical protein binding GO:0051749|indole acetic acid carboxyl methyltransferase activity	GO:0005575|cellular_component
pt2_03804	C	C1S	Potri.001G359100	Potri.001G359100(CS)	sp|D2WL32|GLGB3_ARATH	1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=SBE3 PE=1 SV=1	AT3G20440.1	| Symbols: EMB2729, BE1 | Alpha amylase family protein | chr3:7123603-7130364 REVERSE LENGTH=869	LOC_Os06g26234.3	protein|1,4-alpha-glucan-branching enzyme, putative, expressed	IMGA|contig_238602_1.1	1 4-alpha-glucan branching enzyme contig_238602 167-759 H PREDN 20111014	GO:0005975|carbohydrate metabolic process GO:0009791|post-embryonic development GO:0009793|embryo development ending in seed dormancy	GO:0003824|catalytic activity GO:0004556|alpha-amylase activity GO:0043169|cation binding	GO:0009507|chloroplast GO:0009536|plastid
pt2_03805	C	C1S	Potri.001G359200	Potri.001G359200(CS)	sp|D2WL32|GLGB3_ARATH	1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=SBE3 PE=1 SV=1	AT3G20440.2	| Symbols: EMB2729, BE1 | Alpha amylase family protein | chr3:7123603-7130364 REVERSE LENGTH=899	LOC_Os06g26234.1	protein|1,4-alpha-glucan-branching enzyme, putative, expressed	NA	NA	GO:0005975|carbohydrate metabolic process GO:0009791|post-embryonic development GO:0009793|embryo development ending in seed dormancy	GO:0003824|catalytic activity GO:0004556|alpha-amylase activity GO:0043169|cation binding	GO:0009507|chloroplast GO:0009536|plastid
pt2_03806	A	A1S	Potri.001G359200	Potri.001G359200(AS)	POPTR_0001s36980	sp|D2WL32|GLGB3_ARATH	1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=SBE3 PE=1 SV=1	AT3G20440.2	| Symbols: EMB2729, BE1 | Alpha amylase family protein | chr3:7123603-7130364 REVERSE LENGTH=899	LOC_Os06g26234.1	protein|1,4-alpha-glucan-branching enzyme, putative, expressed	NA	NA	GO:0005975|carbohydrate metabolic process GO:0009791|post-embryonic development GO:0009793|embryo development ending in seed dormancy	GO:0003824|catalytic activity GO:0004556|alpha-amylase activity GO:0043169|cation binding	GO:0009507|chloroplast GO:0009536|plastid
pt2_03807	A	A2S	Potri.001G359300	Potri.001G359300(AS) Potri.011G086800(BS)	POPTR_0001s37000	sp|Q6P819|RCD1_XENTR	Cell differentiation protein RCD1 homolog OS=Xenopus tropicalis GN=rqcd1 PE=2 SV=1	AT3G20800.1	| Symbols: | Cell differentiation, Rcd1-like protein | chr3:7271412-7273897 REVERSE LENGTH=316	LOC_Os07g37790.1	protein|expressed protein	IMGA|Medtr5g093460.1	Cell differentiation protein RCD1-like protein chr5 39781554-39765654 H EGN_Mt100125 20111014	GO:0007275|multicellular organismal development	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_03808	A	A1S	Potri.001G359400	Potri.001G359400(AS)	POPTR_0001s37010	sp|O74462|TAF6_SCHPO	Transcription initiation factor TFIID subunit 6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=taf6 PE=1 SV=1	AT1G04950.3	| Symbols: TAFII59, TAF6, ATTAF6 | TATA BOX ASSOCIATED FACTOR II 59 | chr1:1403606-1407184 REVERSE LENGTH=549	LOC_Os01g32750.1	protein|TATA binding protein-associated factor, putative, expressed	NA	NA	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0006352|DNA-dependent transcription, initiation GO:0006366|transcription from RNA polymerase II promoter GO:0009860|pollen tube growth GO:0010048|vernalization response GO:0048573|photoperiodism, flowering GO:0051090|regulation of sequence-specific DNA binding transcription factor activity	GO:0003677|DNA binding	GO:0005634|nucleus
pt2_03809	A	A1S	Potri.001G359500	Potri.001G359500(AS)	POPTR_0001s37020	sp|Q42545|FTSZ1_ARATH	Cell division protein FtsZ homolog 1, chloroplastic OS=Arabidopsis thaliana GN=FTSZ1 PE=1 SV=2	AT5G55280.1	| Symbols: FTSZ1-1, ATFTSZ1-1, CPFTSZ | homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1 | chr5:22420740-22422527 REVERSE LENGTH=433	LOC_Os04g56970.2	protein|tubulin/FtsZ domain containing protein, putative, expressed	IMGA|Medtr5g094120.1	FtsZ protein chr5 40071886-40066398 F EGN_Mt100125 20111014	GO:0006184|GTP catabolic process GO:0009220|pyrimidine ribonucleotide biosynthetic process GO:0009637|response to blue light GO:0009658|chloroplast organization GO:0009902|chloroplast relocation GO:0010020|chloroplast fission GO:0043572|plastid fission GO:0051258|protein polymerization	GO:0003924|GTPase activity GO:0005198|structural molecule activity GO:0005515|protein binding GO:0005525|GTP binding GO:0042802|identical protein binding GO:0043621|protein self-association	GO:0005737|cytoplasm GO:0005874|microtubule GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009570|chloroplast stroma GO:0043234|protein complex
pt2_03810	A	A1S	Potri.001G359600	Potri.001G359600(AS)	POPTR_0001s37030	NA	NA	AT5G55290.2	| Symbols: | ATPase, V0 complex, subunit E | chr5:22423037-22424086 REVERSE LENGTH=70	NA	NA	IMGA|Medtr5g094130.1	ATP synthase subunit H protein chr5 40073524-40076688 F EGN_Mt100125 20111014	GO:0006661|phosphatidylinositol biosynthetic process GO:0015991|ATP hydrolysis coupled proton transport	GO:0015078|hydrogen ion transmembrane transporter activity	GO:0005773|vacuole GO:0033179|proton-transporting V-type ATPase, V0 domain
pt2_03811	A	A2S	Potri.001G359700	Potri.001G359700(AS) Potri.011G092700(BS)	POPTR_0001s37040	sp|P30181|TOP1_ARATH	DNA topoisomerase 1 OS=Arabidopsis thaliana GN=TOP1 PE=1 SV=1	AT5G55310.1	| Symbols: TOP1BETA, TOP1 | DNA topoisomerase 1 beta | chr5:22430389-22434590 REVERSE LENGTH=917	LOC_Os08g05840.1	protein|DNA topoisomerase 1, putative, expressed	IMGA|contig_85923_1.1	DNA topoisomerase I contig_85923 141-1702 F PREDN 20111014	GO:0001676|long-chain fatty acid metabolic process GO:0002213|defense response to insect GO:0006259|DNA metabolic process GO:0006265|DNA topological change GO:0006338|chromatin remodeling GO:0006633|fatty acid biosynthetic process GO:0009640|photomorphogenesis GO:0009791|post-embryonic development GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009909|regulation of flower development GO:0009933|meristem structural organization GO:0009965|leaf morphogenesis GO:0010016|shoot morphogenesis GO:0010075|regulation of meristem growth GO:0010162|seed dormancy process GO:0010182|sugar mediated signaling pathway GO:0010228|vegetative to reproductive phase transition of meristem GO:0016567|protein ubiquitination GO:0019827|stem cell maintenance GO:0019915|lipid storage GO:0048439|flower morphogenesis GO:0048645|organ formation GO:0050826|response to freezing	GO:0003677|DNA binding GO:0003917|DNA topoisomerase type I activity GO:0003918|DNA topoisomerase (ATP-hydrolyzing) activity GO:0005515|protein binding GO:0031490|chromatin DNA binding	GO:0005634|nucleus GO:0005694|chromosome GO:0016020|membrane
pt2_03812	C	C1S	Potri.001G359800	Potri.001G359800(CS)	NA	NA	AT1G21680.1	| Symbols: | DPP6 N-terminal domain-like protein | chr1:7613028-7615148 FORWARD LENGTH=706	LOC_Os03g62370.1	protein|WD40-like Beta Propeller Repeat family protein, expressed	NA	NA	GO:0008150|biological_process GO:0019243|methylglyoxal catabolic process to D-lactate	GO:0003674|molecular_function	GO:0005576|extracellular region GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0009505|plant-type cell wall
pt2_03813	A	A1S	Potri.001G359900	Potri.001G359900(AS)	POPTR_0001s37070	sp|Q55FD6|Y8158_DICDI	PHD finger-containing protein DDB_G0268158 OS=Dictyostelium discoideum GN=DDB_G0268158 PE=4 SV=1	AT5G55390.2	| Symbols: EDM2 | ENHANCED DOWNY MILDEW 2 | chr5:22448152-22454414 REVERSE LENGTH=1297	LOC_Os08g24946.1	protein|EDM2, putative, expressed	IMGA|Medtr5g094150.1	hypothetical protein chr5 40087593-40080053 H EGN_Mt100125 20111014	GO:0007165|signal transduction GO:0009911|positive regulation of flower development GO:0010228|vegetative to reproductive phase transition of meristem GO:0050832|defense response to fungus	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_03814	C	C1S	Potri.001G359900	Potri.001G359900(CS)	sp|Q55FD6|Y8158_DICDI	PHD finger-containing protein DDB_G0268158 OS=Dictyostelium discoideum GN=DDB_G0268158 PE=4 SV=1	AT5G55390.2	| Symbols: EDM2 | ENHANCED DOWNY MILDEW 2 | chr5:22448152-22454414 REVERSE LENGTH=1297	LOC_Os08g24946.1	protein|EDM2, putative, expressed	IMGA|Medtr5g094150.1	hypothetical protein chr5 40087593-40080053 H EGN_Mt100125 20111014	GO:0007165|signal transduction GO:0009911|positive regulation of flower development GO:0010228|vegetative to reproductive phase transition of meristem GO:0050832|defense response to fungus	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_03815	C	C1S	Potri.001G359900	Potri.001G359900(CS)	sp|Q55FD6|Y8158_DICDI	PHD finger-containing protein DDB_G0268158 OS=Dictyostelium discoideum GN=DDB_G0268158 PE=4 SV=1	AT5G55390.2	| Symbols: EDM2 | ENHANCED DOWNY MILDEW 2 | chr5:22448152-22454414 REVERSE LENGTH=1297	LOC_Os08g24946.1	protein|EDM2, putative, expressed	IMGA|Medtr5g094150.1	hypothetical protein chr5 40087593-40080053 H EGN_Mt100125 20111014	GO:0007165|signal transduction GO:0009911|positive regulation of flower development GO:0010228|vegetative to reproductive phase transition of meristem GO:0050832|defense response to fungus	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_03816	G	G1	NA	NA	POPTR_0001s37100	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03817	A	A1S	Potri.001G360100	Potri.001G360100(AS)	POPTR_0001s37110	sp|Q7G188|FIMB1_ARATH	Fimbrin-1 OS=Arabidopsis thaliana GN=FIM1 PE=1 SV=2	AT4G26700.2	| Symbols: ATFIM1, FIM1 | fimbrin 1 | chr4:13463760-13467426 FORWARD LENGTH=687	LOC_Os02g48740.1	protein|fimbrin-like protein 2, putative, expressed	IMGA|Medtr5g094160.1	Fimbrin-1 chr5 40095360-40089613 E EGN_Mt100125 20111014	GO:0007623|circadian rhythm GO:0051645|Golgi localization GO:0051646|mitochondrion localization GO:0060151|peroxisome localization	GO:0003779|actin binding	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_03818	A	A1S	Potri.001G360200	Potri.001G360200(AS)	POPTR_0001s37120	sp|Q9NS87|KIF15_HUMAN	Kinesin-like protein KIF15 OS=Homo sapiens GN=KIF15 PE=1 SV=1	AT3G20150.1	| Symbols: | Kinesin motor family protein | chr3:7031412-7036499 FORWARD LENGTH=1114	LOC_Os03g39020.1	protein|Kinesin motor domain domain containing protein, expressed	IMGA|Medtr5g094310.1	Kinesin-like protein KIF15 chr5 40170468-40164914 E EGN_Mt100125 20111014	GO:0006260|DNA replication GO:0006270|DNA replication initiation GO:0006275|regulation of DNA replication GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0006346|methylation-dependent chromatin silencing GO:0008283|cell proliferation GO:0010089|xylem development GO:0016246|RNA interference GO:0044036|cell wall macromolecule metabolic process GO:0051567|histone H3-K9 methylation GO:0051726|regulation of cell cycle	GO:0003777|microtubule motor activity GO:0005524|ATP binding	NA
pt2_03819	A	A1S	Potri.001G360300	Potri.001G360300(AS)	POPTR_0001s37130	NA	NA	AT5G55510.1	| Symbols: | Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein | chr5:22486525-22487916 REVERSE LENGTH=214	LOC_Os12g33020.1	protein|mitochondrial import inner membrane translocase subunit Tim17, putative, expressed	IMGA|Medtr5g094300.1	Mitochondrial import inner membrane translocase subunit TIM22 chr5 40162721-40159625 F EGN_Mt100125 20111014	GO:0015031|protein transport	GO:0015450|P-P-bond-hydrolysis-driven protein transmembrane transporter activity	GO:0005739|mitochondrion GO:0005744|mitochondrial inner membrane presequence translocase complex GO:0009941|chloroplast envelope
pt2_03820	A	A1S	Potri.001G360500	Potri.001G360500(AS)	POPTR_0001s37140	sp|P49199|RS8_ORYSJ	40S ribosomal protein S8 OS=Oryza sativa subsp. japonica GN=RPS8 PE=2 SV=2	AT5G59240.1	| Symbols: | Ribosomal protein S8e family protein | chr5:23902626-23903670 REVERSE LENGTH=210	LOC_Os04g28180.1	protein|ribosomal protein, putative, expressed	NA	NA	GO:0000462|maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0006412|translation GO:0006414|translational elongation GO:0009165|nucleotide biosynthetic process GO:0042991|transcription factor import into nucleus	GO:0003735|structural constituent of ribosome	GO:0005737|cytoplasm GO:0005840|ribosome GO:0016020|membrane GO:0022626|cytosolic ribosome GO:0022627|cytosolic small ribosomal subunit
pt2_03821	A	A1S	Potri.001G360600	Potri.001G360600(AS)	POPTR_0001s37150	sp|Q9LDH0|XYLT_ARATH	Beta-(1,2)-xylosyltransferase OS=Arabidopsis thaliana GN=XYLT PE=1 SV=1	AT5G55500.1	| Symbols: ATXYLT, XYLT | beta-1,2-xylosyltransferase | chr5:22482386-22484417 FORWARD LENGTH=534	LOC_Os08g39380.1	protein|beta 1,2-xylosyltransferase, putative, expressed	NA	NA	GO:0006486|protein glycosylation GO:0006487|protein N-linked glycosylation GO:0006499|N-terminal protein myristoylation GO:0031204|posttranslational protein targeting to membrane, translocation	GO:0042285|xylosyltransferase activity GO:0050513|glycoprotein 2-beta-D-xylosyltransferase activity	GO:0000139|Golgi membrane GO:0005576|extracellular region GO:0005794|Golgi apparatus GO:0005797|Golgi medial cisterna
pt2_03822	A	A1S	Potri.001G360700	Potri.001G360700(AS)	POPTR_0001s37160	sp|Q9SZ11|GLPQ2_ARATH	Probable glycerophosphoryl diester phosphodiesterase 2 OS=Arabidopsis thaliana GN=GPDL2 PE=1 SV=3	AT4G26690.1	| Symbols: SHV3, MRH5, GPDL2 | PLC-like phosphodiesterase family protein | chr4:13456793-13459890 REVERSE LENGTH=759	LOC_Os04g39610.1	protein|glycerophosphoryl diester phosphodiesterase family protein, putative, expressed	IMGA|Medtr5g094230.1	Glycerophosphodiesterase-like protein chr5 40117970-40124220 F EGN_Mt100125 20111014	GO:0006071|glycerol metabolic process GO:0006629|lipid metabolic process GO:0009932|cell tip growth GO:0010026|trichome differentiation GO:0010053|root epidermal cell differentiation GO:0010442|guard cell morphogenesis GO:0016049|cell growth GO:0016051|carbohydrate biosynthetic process GO:0016126|sterol biosynthetic process GO:0030243|cellulose metabolic process GO:0048765|root hair cell differentiation GO:0048767|root hair elongation GO:0052541|plant-type cell wall cellulose metabolic process GO:0052546|cell wall pectin metabolic process	GO:0008081|phosphoric diester hydrolase activity GO:0008889|glycerophosphodiester phosphodiesterase activity GO:0016301|kinase activity	GO:0005886|plasma membrane GO:0009505|plant-type cell wall GO:0031225|anchored to membrane GO:0046658|anchored to plasma membrane
pt2_03823	A	A1S	Potri.001G360800	Potri.001G360800(AS)	POPTR_0001s37170	sp|Q9SZ11|GLPQ2_ARATH	Probable glycerophosphoryl diester phosphodiesterase 2 OS=Arabidopsis thaliana GN=GPDL2 PE=1 SV=3	AT4G26690.1	| Symbols: SHV3, MRH5, GPDL2 | PLC-like phosphodiesterase family protein | chr4:13456793-13459890 REVERSE LENGTH=759	LOC_Os04g39610.1	protein|glycerophosphoryl diester phosphodiesterase family protein, putative, expressed	IMGA|Medtr5g094230.1	Glycerophosphodiesterase-like protein chr5 40117970-40124220 F EGN_Mt100125 20111014	GO:0000272|polysaccharide catabolic process GO:0005982|starch metabolic process GO:0006071|glycerol metabolic process GO:0006629|lipid metabolic process GO:0007155|cell adhesion GO:0009653|anatomical structure morphogenesis GO:0009664|plant-type cell wall organization GO:0010026|trichome differentiation GO:0010054|trichoblast differentiation GO:0010075|regulation of meristem growth GO:0010090|trichome morphogenesis GO:0010442|guard cell morphogenesis GO:0042545|cell wall modification GO:0045010|actin nucleation GO:0048364|root development GO:0048765|root hair cell differentiation GO:0048869|cellular developmental process GO:0052541|plant-type cell wall cellulose metabolic process GO:0052546|cell wall pectin metabolic process GO:0071555|cell wall organization	GO:0008081|phosphoric diester hydrolase activity GO:0008889|glycerophosphodiester phosphodiesterase activity	GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0031225|anchored to membrane GO:0046658|anchored to plasma membrane
pt2_03824	A	A1S	Potri.001G360900	Potri.001G360900(AS)	POPTR_0001s37180	NA	NA	AT5G05800.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 881 Blast hits to 512 proteins in 30 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 38; Plants - 833; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). | chr5:1743234-1744751 REVERSE LENGTH=449	NA	NA	NA	NA	GO:0008150|biological_process GO:0048573|photoperiodism, flowering	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_03825	G	G1	NA	NA	POPTR_0001s37190	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03826	A	A2S	Potri.001G361100	Potri.001G361100(AS) Potri.011G088400(DS)	POPTR_0001s37200	NA	NA	AT5G55530.2	| Symbols: | Calcium-dependent lipid-binding (CaLB domain) family protein | chr5:22494439-22495656 FORWARD LENGTH=405	LOC_Os03g09840.2	protein|C2 domain containing protein, putative, expressed	IMGA|Medtr5g094340.1	hypothetical protein chr5 40186032-40188015 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_03827	A	A1S	Potri.001G361200	Potri.001G361200(AS)	POPTR_0001s37210	sp|Q7RTR2|NLRC3_HUMAN	Protein NLRC3 OS=Homo sapiens GN=NLRC3 PE=2 SV=2	AT5G55540.1	| Symbols: TRN1, LOP1 | tornado 1 | chr5:22496322-22500543 REVERSE LENGTH=1380	LOC_Os03g53990.1	protein|expressed protein	IMGA|Medtr5g035590.1	Nucleotide-binding oligomerization domain-containing protein chr5 15064604-15056312 F EGN_Mt100125 20111014	GO:0009825|multidimensional cell growth GO:0009855|determination of bilateral symmetry GO:0009926|auxin polar transport GO:0009933|meristem structural organization GO:0009956|radial pattern formation GO:0009965|leaf morphogenesis GO:0010014|meristem initiation GO:0010073|meristem maintenance GO:0010305|leaf vascular tissue pattern formation	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_03828	G	G1	NA	NA	POPTR_0001s37220	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03829	A	A1S	Potri.001G361300	Potri.001G361300(AS)	POPTR_0001s37230	sp|Q920Q6|MSI2H_MOUSE	RNA-binding protein Musashi homolog 2 OS=Mus musculus GN=Msi2 PE=1 SV=1	AT3G07810.1	| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr3:2492875-2495052 FORWARD LENGTH=494	LOC_Os11g41890.1	protein|RNA recognition motif containing protein, putative, expressed	IMGA|Medtr5g097580.1	Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like protein chr5 41711192-41715991 F EGN_Mt100125 20111014	NA	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005576|extracellular region
pt2_03830	A	A1S	Potri.001G361400	Potri.001G361400(AS)	POPTR_0001s37240	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003676|nucleic acid binding GO:0008270|zinc ion binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03831	A	A1S	Potri.001G361500	Potri.001G361500(AS)	POPTR_0001s37250	sp|P0C896|PP209_ARATH	Pentatricopeptide repeat-containing protein At3g02650, mitochondrial OS=Arabidopsis thaliana GN=At3g02650 PE=2 SV=1	AT3G02650.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:568135-569865 FORWARD LENGTH=576	LOC_Os01g67210.1	protein|PPR repeat domain containing protein, putative, expressed	IMGA|Medtr5g088900.1	Pentatricopeptide repeat-containing protein chr5 37567652-37565285 H EGN_Mt100125 20111014	GO:0008150|biological_process GO:0009220|pyrimidine ribonucleotide biosynthetic process GO:0009640|photomorphogenesis GO:0009909|regulation of flower development GO:0010388|cullin deneddylation GO:0034968|histone lysine methylation	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_03832	A	A2S	Potri.001G361600	Potri.001G361600(AS) Potri.011G087900(BS)	POPTR_0001s37260	sp|Q93WV0|WRK20_ARATH	Probable WRKY transcription factor 20 OS=Arabidopsis thaliana GN=WRKY20 PE=2 SV=1	AT4G26640.2	| Symbols: WRKY20, AtWRKY20 | WRKY family transcription factor family protein | chr4:13437298-13440693 REVERSE LENGTH=557	LOC_Os07g39480.1	protein|WRKY87, expressed	IMGA|Medtr5g094430.1	WRKY transcription factor chr5 40230167-40234129 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009611|response to wounding GO:0009616|virus induced gene silencing GO:0009961|response to 1-Aminocyclopropane-1-carboxylic Acid GO:0010050|vegetative phase change GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_03833	A	A1S	Potri.001G361700	Potri.001G361700(AS)	POPTR_0001s37270	sp|Q8H125|SCL5_ARATH	Scarecrow-like protein 5 OS=Arabidopsis thaliana GN=SCL5 PE=2 SV=1	AT1G50600.1	| Symbols: SCL5 | scarecrow-like 5 | chr1:18737398-18739547 REVERSE LENGTH=597	LOC_Os07g39470.1	protein|gibberellin response modulator protein, putative, expressed	IMGA|Medtr5g097480.1	Chitin-inducible gibberellin-responsive protein chr5 41660791-41664149 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus GO:0005829|cytosol
pt2_03834	A	A1S	Potri.001G361800	Potri.001G361800(AS)	POPTR_0001s37280	NA	NA	AT5G55580.1	| Symbols: | Mitochondrial transcription termination factor family protein | chr5:22515601-22517408 FORWARD LENGTH=496	LOC_Os07g39430.1	protein|mTERF family protein, expressed	IMGA|Medtr5g094610.1	mTERF domain-containing protein chr5 40306157-40309320 E EGN_Mt100125 20111014	GO:0048364|root development GO:0048367|shoot development	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_03835	A	A1S	Potri.001G361800	Potri.001G361800(AS)	POPTR_0001s37280	NA	NA	AT5G55580.1	| Symbols: | Mitochondrial transcription termination factor family protein | chr5:22515601-22517408 FORWARD LENGTH=496	LOC_Os07g39430.1	protein|mTERF family protein, expressed	IMGA|Medtr5g094610.1	mTERF domain-containing protein chr5 40306157-40309320 E EGN_Mt100125 20111014	GO:0048364|root development GO:0048367|shoot development	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_03836	A	A1S	Potri.001G361800	Potri.001G361800(AS)	POPTR_0001s37280	NA	NA	AT5G55580.1	| Symbols: | Mitochondrial transcription termination factor family protein | chr5:22515601-22517408 FORWARD LENGTH=496	LOC_Os07g39430.1	protein|mTERF family protein, expressed	IMGA|Medtr5g094610.1	mTERF domain-containing protein chr5 40306157-40309320 E EGN_Mt100125 20111014	GO:0048364|root development GO:0048367|shoot development	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_03837	A	A1S	Potri.001G361900	Potri.001G361900(AS)	POPTR_0001s37290	sp|Q9BUK6|MSTO1_HUMAN	Protein misato homolog 1 OS=Homo sapiens GN=MSTO1 PE=1 SV=1	AT4G37190.1	| Symbols: | LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta tubulin, autoregulation binding site (InterPro:IPR013838), Misato Segment II, myosin-like (InterPro:IPR019605), Tubulin/FtsZ, N-terminal (InterPro:IPR019746); Has 345 Blast hits to 341 proteins in 161 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi - 140; Plants - 55; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). | chr4:17507155-17509512 FORWARD LENGTH=562	LOC_Os03g13770.1	protein|tubulin, putative, expressed	IMGA|Medtr5g017970.1	Misato-like protein chr5 6412894-6405758 E EGN_Mt100125 20111014	GO:0051258|protein polymerization	NA	GO:0005739|mitochondrion GO:0005774|vacuolar membrane GO:0005829|cytosol GO:0043234|protein complex
pt2_03838	A	A2S	Potri.001G362000	Potri.001G362000(AS) Potri.001G362100(AA)	POPTR_0001s37300	NA	NA	NA	NA	NA	NA	IMGA|Medtr5g097300.1	hypothetical protein chr5 41577656-41578069 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_03839	A	A1S	Potri.001G362100	Potri.001G362100(AS)	POPTR_0001s37310	sp|Q84R21|Y1559_ARATH	DUF21 domain-containing protein At1g55930, chloroplastic OS=Arabidopsis thaliana GN=CBSDUFCH2 PE=2 SV=2	AT1G55930.1	| Symbols: | CBS domain-containing protein / transporter associated domain-containing protein | chr1:20918895-20922133 FORWARD LENGTH=653	LOC_Os03g39640.2	protein|CBS domain containing protein, expressed	IMGA|Medtr5g094740.1	Magnesium and cobalt efflux protein corC chr5 40364697-40356012 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005886|plasma membrane GO:0009536|plastid GO:0009941|chloroplast envelope
pt2_03840	C	C1S	Potri.001G362100	Potri.001G362100(CS)	sp|Q84R21|Y1559_ARATH	DUF21 domain-containing protein At1g55930, chloroplastic OS=Arabidopsis thaliana GN=CBSDUFCH2 PE=2 SV=2	AT1G55930.1	| Symbols: | CBS domain-containing protein / transporter associated domain-containing protein | chr1:20918895-20922133 FORWARD LENGTH=653	LOC_Os03g39640.2	protein|CBS domain containing protein, expressed	IMGA|Medtr5g094740.1	Magnesium and cobalt efflux protein corC chr5 40364697-40356012 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005886|plasma membrane GO:0009536|plastid GO:0009941|chloroplast envelope
pt2_03841	A	A1S	Potri.001G362200	Potri.001G362200(AS)	POPTR_0001s37330	sp|Q9LK64|AB3C_ARATH	ABC transporter C family member 3 OS=Arabidopsis thaliana GN=ABCC3 PE=1 SV=1	AT3G13080.1	| Symbols: ATMRP3, MRP3, ABCC3 | multidrug resistance-associated protein 3 | chr3:4196019-4201250 REVERSE LENGTH=1514	LOC_Os01g07870.1	protein|ABC transporter family protein, putative, expressed	IMGA|Medtr5g094830.1	Multidrug resistance protein ABC transporter family chr5 40415181-40408863 E EGN_Mt100125 20111014	GO:0006810|transport GO:0055085|transmembrane transport	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0010290|chlorophyll catabolite transmembrane transporter activity GO:0015431|glutathione S-conjugate-exporting ATPase activity GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0000325|plant-type vacuole GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016021|integral to membrane GO:0048046|apoplast
pt2_03842	A	A1S	Potri.001G362300	Potri.001G362300(AS)	POPTR_0001s37340	sp|Q9LK64|AB3C_ARATH	ABC transporter C family member 3 OS=Arabidopsis thaliana GN=ABCC3 PE=1 SV=1	AT3G13080.1	| Symbols: ATMRP3, MRP3, ABCC3 | multidrug resistance-associated protein 3 | chr3:4196019-4201250 REVERSE LENGTH=1514	LOC_Os01g07870.1	protein|ABC transporter family protein, putative, expressed	IMGA|Medtr5g094830.1	Multidrug resistance protein ABC transporter family chr5 40415181-40408863 E EGN_Mt100125 20111014	GO:0006810|transport GO:0055085|transmembrane transport	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0010290|chlorophyll catabolite transmembrane transporter activity GO:0015431|glutathione S-conjugate-exporting ATPase activity GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0000325|plant-type vacuole GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016021|integral to membrane GO:0048046|apoplast
pt2_03843	G	G2	NA	NA	POPTR_0001s37360	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03844	A	A12S	Potri.001G362500	Potri.001G362500(AS) Potri.001G363800(BS) Potri.001G363000(BS) Potri.001G363900(BS) Potri.001G362600(BS) Potri.001G365400(BS) Potri.001G363100(BS) Potri.001G362800(BS) Potri.001G364900(BS) Potri.001G364600(BS) Potri.001G365100(BS) Potri.001G365300(DS)	POPTR_0001s37370	sp|A6YIH8|C7D55_HYOMU	Premnaspirodiene oxygenase OS=Hyoscyamus muticus GN=CYP71D55 PE=1 SV=1	AT3G26300.1	| Symbols: CYP71B34 | cytochrome P450, family 71, subfamily B, polypeptide 34 | chr3:9639199-9640866 REVERSE LENGTH=500	LOC_Os06g43350.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g094550.1	Cytochrome P450 chr5 40288757-40290756 E EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	NA
pt2_03845	B	B1S	Potri.001G365200	Potri.001G365200(BS)	POPTR_0001s37390	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03846	A	A11S	Potri.001G365300	Potri.001G365300(AS) Potri.001G363900(AS) Potri.001G364900(AS) Potri.001G363000(BS) Potri.001G362600(BS) Potri.001G365400(BS) Potri.001G362500(BS) Potri.001G363100(BS) Potri.001G362800(BS) Potri.001G364600(BS) Potri.001G365100(BS)	POPTR_0001s37410	sp|A6YIH8|C7D55_HYOMU	Premnaspirodiene oxygenase OS=Hyoscyamus muticus GN=CYP71D55 PE=1 SV=1	AT3G26300.1	| Symbols: CYP71B34 | cytochrome P450, family 71, subfamily B, polypeptide 34 | chr3:9639199-9640866 REVERSE LENGTH=500	LOC_Os09g10340.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g094550.1	Cytochrome P450 chr5 40288757-40290756 E EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	NA
pt2_03847	C	C1S	Potri.001G365300	Potri.001G365300(CS)	sp|A6YIH8|C7D55_HYOMU	Premnaspirodiene oxygenase OS=Hyoscyamus muticus GN=CYP71D55 PE=1 SV=1	AT3G26300.1	| Symbols: CYP71B34 | cytochrome P450, family 71, subfamily B, polypeptide 34 | chr3:9639199-9640866 REVERSE LENGTH=500	LOC_Os09g10340.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g094550.1	Cytochrome P450 chr5 40288757-40290756 E EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	NA
pt2_03848	A	A2S	Potri.001G364000	Potri.001G364000(AS) Potri.001G365500(BS)	POPTR_0001s37420	sp|Q39218|SAT3_ARATH	Serine acetyltransferase 3, mitochondrial OS=Arabidopsis thaliana GN=SAT3 PE=1 SV=3	AT3G13110.1	| Symbols: ATSERAT2;2, SAT-1, SAT-A, SAT3, SAT-M, SERAT2;2 | serine acetyltransferase 2;2 | chr3:4214939-4216114 REVERSE LENGTH=391	LOC_Os01g52260.1	protein|serine acetyltransferase protein, putative, expressed	IMGA|Medtr5g095470.1	Serine acetyltransferase chr5 40691374-40690257 E EGN_Mt100125 20111014	GO:0006535|cysteine biosynthetic process from serine GO:0006569|tryptophan catabolic process GO:0009684|indoleacetic acid biosynthetic process GO:0019344|cysteine biosynthetic process GO:0019761|glucosinolate biosynthetic process GO:0046686|response to cadmium ion	GO:0005515|protein binding GO:0008270|zinc ion binding GO:0009001|serine O-acetyltransferase activity GO:0016740|transferase activity	GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_03849	A	A2S	Potri.001G365600	Potri.001G365600(AS) Potri.001G364100(AS)	POPTR_0001s37430	sp|Q9M4Y3|RR10_MESCR	30S ribosomal protein S10, chloroplastic OS=Mesembryanthemum crystallinum GN=RPS10 PE=2 SV=1	AT3G13120.2	| Symbols: | Ribosomal protein S10p/S20e family protein | chr3:4220310-4221526 REVERSE LENGTH=191	LOC_Os03g10060.1	protein|S10/S20 domain containing ribosomal protein, putative, expressed	NA	NA	GO:0006364|rRNA processing GO:0006412|translation GO:0009902|chloroplast relocation GO:0010027|thylakoid membrane organization GO:0015979|photosynthesis GO:0015995|chlorophyll biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0034660|ncRNA metabolic process	GO:0003723|RNA binding GO:0003735|structural constituent of ribosome	GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0015935|small ribosomal subunit
pt2_03850	A	A2S	Potri.001G365700	Potri.001G365700(AS) Potri.001G364200(AS)	POPTR_0001s37440	sp|Q9FM79|PME62_ARATH	Pectinesterase QRT1 OS=Arabidopsis thaliana GN=QRT1 PE=2 SV=1	AT5G55590.1	| Symbols: QRT1 | Pectin lyase-like superfamily protein | chr5:22519911-22521699 FORWARD LENGTH=380	LOC_Os07g41650.1	protein|pectinesterase, putative, expressed	IMGA|Medtr5g095490.1	Pectinesterase chr5 40697931-40699808 H EGN_Mt100125 20111014	GO:0042545|cell wall modification GO:0045490|pectin catabolic process	GO:0030599|pectinesterase activity	GO:0005576|extracellular region GO:0005618|cell wall GO:0009505|plant-type cell wall
pt2_03851	A	A2S	Potri.001G365800	Potri.001G365800(AS) Potri.001G364300(AS)	POPTR_0001s37450	NA	NA	AT5G55600.3	| Symbols: | agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein | chr5:22522232-22524796 REVERSE LENGTH=663	LOC_Os07g41640.1	protein|agenet domain-containing protein, putative, expressed	IMGA|Medtr5g055210.1	Agenet and bromo-adjacent homology (BAH) domain-containing protein-like protein chr5 22203607-22200291 F EGN_Mt100125 20111014	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0006487|protein N-linked glycosylation GO:0008150|biological_process	GO:0003677|DNA binding GO:0003723|RNA binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03852	A	A1S	Potri.001G365900	Potri.001G365900(AS)	POPTR_0001s37460	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03853	A	A2S	Potri.001G366000	Potri.001G366000(AS) Potri.001G366200(DA)	POPTR_0001s37470	NA	NA	AT5G55610.1	| Symbols: | unknown protein; LOCATED IN: mitochondrion, chloroplast, plastid, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:22525981-22527858 FORWARD LENGTH=329	LOC_Os12g31490.1	protein|expressed protein	NA	NA	GO:0006096|glycolysis GO:0006857|oligopeptide transport GO:0009060|aerobic respiration GO:0046686|response to cadmium ion	NA	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009536|plastid GO:0016020|membrane
pt2_03854	A	A2S	Potri.001G366100	Potri.001G366100(AS) Potri.001G364400(DS)	POPTR_0001s37480	sp|Q94EG9|ZIP11_ARATH	Zinc transporter 11 OS=Arabidopsis thaliana GN=ZIP11 PE=2 SV=1	AT1G55910.1	| Symbols: ZIP11 | zinc transporter 11 precursor | chr1:20906161-20907225 FORWARD LENGTH=326	LOC_Os03g29850.1	protein|metal cation transporter, putative, expressed	NA	NA	GO:0006812|cation transport GO:0030001|metal ion transport GO:0055085|transmembrane transport	GO:0008324|cation transmembrane transporter activity GO:0046873|metal ion transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_03855	A	A2S	Potri.001G366200	Potri.001G366200(AS) Potri.001G366100(DS)	POPTR_0001s37490	sp|Q94EG9|ZIP11_ARATH	Zinc transporter 11 OS=Arabidopsis thaliana GN=ZIP11 PE=2 SV=1	AT1G55910.1	| Symbols: ZIP11 | zinc transporter 11 precursor | chr1:20906161-20907225 FORWARD LENGTH=326	LOC_Os03g29850.1	protein|metal cation transporter, putative, expressed	IMGA|Medtr5g071990.1	Zinc transporter chr5 29623620-29621192 E EGN_Mt100125 20111014	GO:0006812|cation transport GO:0030001|metal ion transport GO:0055085|transmembrane transport	GO:0008324|cation transmembrane transporter activity GO:0046873|metal ion transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_03856	A	A2S	Potri.001G364500	Potri.001G364500(AS) Potri.001G366300(AS)	POPTR_0001s37500	sp|Q8VYE2|TIM50_ARATH	Mitochondrial import inner membrane translocase subunit TIM50 OS=Arabidopsis thaliana GN=TIM50 PE=1 SV=1	AT1G55900.1	| Symbols: TIM50, emb1860 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr1:20903163-20905420 FORWARD LENGTH=376	LOC_Os05g43770.1	protein|NLI interacting factor-like phosphatase, putative, expressed	IMGA|Medtr5g095530.1	Mitochondrial import inner membrane translocase subunit TIM50 chr5 40717360-40711779 F EGN_Mt100125 20111014	GO:0006626|protein targeting to mitochondrion GO:0009220|pyrimidine ribonucleotide biosynthetic process GO:0009640|photomorphogenesis GO:0009793|embryo development ending in seed dormancy GO:0009853|photorespiration GO:0010388|cullin deneddylation	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0005743|mitochondrial inner membrane
pt2_03857	A	A1S	Potri.001G366400	Potri.001G366400(AS)	POPTR_0001s37510	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03858	A	A1S	Potri.001G366500	Potri.001G366500(AS)	POPTR_0001s37520	NA	NA	AT3G13130.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte; Has 140 Blast hits to 132 proteins in 41 species: Archae - 2; Bacteria - 4; Metazoa - 29; Fungi - 20; Plants - 51; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). | chr3:4223008-4223613 FORWARD LENGTH=201	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_03859	A	A1S	Potri.001G366600	Potri.001G366600(AS)	POPTR_0001s37530	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03860	A	A1S	Potri.001G366700	Potri.001G366700(AS)	POPTR_0001s37540	sp|Q9M4A2|SPO11_ARATH	Meiotic recombination protein SPO11-1 OS=Arabidopsis thaliana GN=SPO11-1 PE=1 SV=1	AT3G13170.1	| Symbols: ATSPO11-1 | Spo11/DNA topoisomerase VI, subunit A protein | chr3:4231560-4234192 REVERSE LENGTH=362	LOC_Os03g54091.1	protein|OsTOP6A1 - Topoisomerase 6 subunit A homolog 1, expressed	IMGA|Medtr5g095040.1	Meiotic recombination protein SPO11-1 chr5 40502990-40506397 H EGN_Mt100125 20111014	GO:0000706|meiotic DNA double-strand break processing GO:0000724|double-strand break repair via homologous recombination GO:0006259|DNA metabolic process GO:0006265|DNA topological change GO:0006302|double-strand break repair GO:0006312|mitotic recombination GO:0006355|regulation of transcription, DNA-dependent GO:0007062|sister chromatid cohesion GO:0007129|synapsis GO:0007131|reciprocal meiotic recombination GO:0007140|male meiosis GO:0010212|response to ionizing radiation GO:0010332|response to gamma radiation GO:0016444|somatic cell DNA recombination GO:0031048|chromatin silencing by small RNA GO:0032204|regulation of telomere maintenance GO:0032504|multicellular organism reproduction GO:0033044|regulation of chromosome organization GO:0034090|maintenance of meiotic sister chromatid cohesion GO:0042138|meiotic DNA double-strand break formation GO:0043247|telomere maintenance in response to DNA damage GO:0043687|post-translational protein modification GO:0045132|meiotic chromosome segregation GO:0045893|positive regulation of transcription, DNA-dependent GO:0051026|chiasma assembly	GO:0003677|DNA binding GO:0003824|catalytic activity GO:0003918|DNA topoisomerase (ATP-hydrolyzing) activity GO:0005524|ATP binding	GO:0005634|nucleus GO:0005694|chromosome
pt2_03861	B	B1S	Potri.001G366800	Potri.001G366800(BS)	POPTR_0001s37550	sp|Q8LBL1|TPK1_ARATH	Two-pore potassium channel 1 OS=Arabidopsis thaliana GN=TPK1 PE=1 SV=2	AT5G55630.2	| Symbols: KCO1, TPK1 | Outward rectifying potassium channel protein | chr5:22531718-22532893 FORWARD LENGTH=363	LOC_Os03g54100.2	protein|potassium channel protein, putative, expressed	IMGA|Medtr5g095650.1	Outward rectifying potassium channel chr5 40770179-40772279 E EGN_Mt100125 20111014	GO:0000271|polysaccharide biosynthetic process GO:0006816|calcium ion transport GO:0007030|Golgi organization GO:0009651|response to salt stress GO:0010029|regulation of seed germination GO:0010119|regulation of stomatal movement GO:0030003|cellular cation homeostasis GO:0030007|cellular potassium ion homeostasis GO:0051260|protein homooligomerization GO:0070838|divalent metal ion transport GO:0071805|potassium ion transmembrane transport	GO:0005216|ion channel activity GO:0005267|potassium channel activity GO:0015269|calcium-activated potassium channel activity GO:0015271|outward rectifier potassium channel activity	GO:0005774|vacuolar membrane GO:0016020|membrane
pt2_03862	A	A1S	Potri.001G366900	Potri.001G366900(AS)	POPTR_0001s37560	NA	NA	AT3G13175.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G16400.1); Has 29 Blast hits to 29 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:4235260-4235580 REVERSE LENGTH=106	NA	NA	IMGA|Medtr5g095660.1	hypothetical protein chr5 40776281-40775455 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_03863	A	A1S	Potri.001G367000	Potri.001G367000(AS)	POPTR_0001s37570	sp|P87131|CYSK2_SCHPO	Cysteine synthase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cys12 PE=2 SV=1	AT1G55880.1	| Symbols: | Pyridoxal-5'-phosphate-dependent enzyme family protein | chr1:20899292-20901140 REVERSE LENGTH=421	LOC_Os03g11660.1	protein|cysteine synthase, putative, expressed	IMGA|Medtr5g095670.1	Cysteine synthase chr5 40780229-40783455 E EGN_Mt100125 20111014	GO:0006520|cellular amino acid metabolic process GO:0006535|cysteine biosynthetic process from serine GO:0008152|metabolic process GO:0048573|photoperiodism, flowering	GO:0003824|catalytic activity GO:0016829|lyase activity GO:0030170|pyridoxal phosphate binding	NA
pt2_03864	A	A1S	Potri.001G367100	Potri.001G367100(AS)	POPTR_0001s37580	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03865	A	A1S	Potri.001G367100	Potri.001G367100(AS)	POPTR_0001s37580	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03866	A	A1S	Potri.001G367100	Potri.001G367100(AS)	POPTR_0001s37580	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03867	A	A1S	Potri.001G367200	Potri.001G367200(AS)	POPTR_0001s37590	NA	NA	AT5G55640.1	| Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:22533244-22533923 REVERSE LENGTH=149	LOC_Os03g39820.1	protein|expressed protein	IMGA|Medtr5g095700.1	hypothetical protein chr5 40797112-40793637 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_03868	A	A1S	Potri.001G367300	Potri.001G367300(AS)	POPTR_0001s37600	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03869	B	B1S	Potri.001G367400	Potri.001G367400(BS)	POPTR_0001s37610	sp|Q6AXS3|DEK_RAT	Protein DEK OS=Rattus norvegicus GN=Dek PE=2 SV=1	AT5G55660.1	| Symbols: | DEK domain-containing chromatin associated protein | chr5:22539375-22543142 FORWARD LENGTH=778	LOC_Os03g40010.1	protein|DEK C terminal domain containing protein, expressed	IMGA|Medtr5g095720.1	Protein DEK chr5 40801950-40814304 E EGN_Mt100125 20111014	NA	NA	GO:0005634|nucleus GO:0005829|cytosol
pt2_03870	A	A1S	Potri.001G367500	Potri.001G367500(AS)	POPTR_0001s37620	sp|O23310|NFYB3_ARATH	Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana GN=NFYB3 PE=2 SV=1	AT4G14540.1	| Symbols: NF-YB3 | nuclear factor Y, subunit B3 | chr4:8344663-8345148 FORWARD LENGTH=161	LOC_Os03g29970.1	protein|histone-like transcription factor and archaeal histone, putative, expressed	IMGA|Medtr5g095740.1	Nuclear transcription factor Y subunit B-3 chr5 40827696-40828877 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_03871	A	A2S	Potri.001G367700	Potri.001G367700(AS) Potri.001G367600(AA)	POPTR_0001s37630	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03872	A	A1S	Potri.001G367800	Potri.001G367800(AS)	POPTR_0001s37640	sp|Q93Z25|PLY22_ARATH	Probable pectate lyase 22 OS=Arabidopsis thaliana GN=At5g63180 PE=2 SV=1	AT5G63180.1	| Symbols: | Pectin lyase-like superfamily protein | chr5:25341106-25343113 REVERSE LENGTH=432	LOC_Os04g05050.2	protein|pectate lyase precursor, putative, expressed	IMGA|AC235753_8.1	Pectate lyase AC235753.2 24915-27580 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0016829|lyase activity GO:0030570|pectate lyase activity	GO:0005576|extracellular region
pt2_03873	A	A1S	Potri.001G367900	Potri.001G367900(AS)	POPTR_0001s37650	sp|Q9FM65|FLA1_ARATH	Fasciclin-like arabinogalactan protein 1 OS=Arabidopsis thaliana GN=FLA1 PE=1 SV=1	AT5G55730.2	| Symbols: FLA1 | FASCICLIN-like arabinogalactan 1 | chr5:22558375-22560392 REVERSE LENGTH=424	LOC_Os08g23180.1	protein|fasciclin-like arabinogalactan protein 8 precursor, putative, expressed	IMGA|contig_248110_1.1	Fasciclin-like arabinogalactan protein contig_248110 1196-16 E PREDN 20111014	GO:0048364|root development GO:0048367|shoot development	NA	GO:0005618|cell wall GO:0005886|plasma membrane GO:0031225|anchored to membrane GO:0046658|anchored to plasma membrane
pt2_03874	G	G1	NA	NA	POPTR_0001s37660	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03875	A	A1S	Potri.001G368000	Potri.001G368000(AS)	POPTR_0001s37670	sp|Q6NPD7|NUD10_ARATH	Nudix hydrolase 10 OS=Arabidopsis thaliana GN=NUDT10 PE=1 SV=1	AT4G25434.1	| Symbols: ATNUDT10, NUDT10 | nudix hydrolase homolog 10 | chr4:13004043-13005771 REVERSE LENGTH=277	LOC_Os06g42790.2	protein|hydrolase, NUDIX family, domain containing protein, expressed	NA	NA	GO:0006979|response to oxidative stress GO:0008152|metabolic process	GO:0003824|catalytic activity GO:0016787|hydrolase activity GO:0047631|ADP-ribose diphosphatase activity GO:0051287|NAD binding	GO:0005634|nucleus GO:0005829|cytosol
pt2_03876	A	A1S	Potri.001G368000	Potri.001G368000(AS)	POPTR_0001s37670	sp|Q6NPD7|NUD10_ARATH	Nudix hydrolase 10 OS=Arabidopsis thaliana GN=NUDT10 PE=1 SV=1	AT4G25434.1	| Symbols: ATNUDT10, NUDT10 | nudix hydrolase homolog 10 | chr4:13004043-13005771 REVERSE LENGTH=277	LOC_Os06g42790.2	protein|hydrolase, NUDIX family, domain containing protein, expressed	NA	NA	GO:0006979|response to oxidative stress GO:0008152|metabolic process	GO:0003824|catalytic activity GO:0016787|hydrolase activity GO:0047631|ADP-ribose diphosphatase activity GO:0051287|NAD binding	GO:0005634|nucleus GO:0005829|cytosol
pt2_03877	A	A1S	Potri.001G368000	Potri.001G368000(AS)	POPTR_0001s37670	sp|Q6NPD7|NUD10_ARATH	Nudix hydrolase 10 OS=Arabidopsis thaliana GN=NUDT10 PE=1 SV=1	AT4G25434.1	| Symbols: ATNUDT10, NUDT10 | nudix hydrolase homolog 10 | chr4:13004043-13005771 REVERSE LENGTH=277	LOC_Os06g42790.2	protein|hydrolase, NUDIX family, domain containing protein, expressed	NA	NA	GO:0006979|response to oxidative stress GO:0008152|metabolic process	GO:0003824|catalytic activity GO:0016787|hydrolase activity GO:0047631|ADP-ribose diphosphatase activity GO:0051287|NAD binding	GO:0005634|nucleus GO:0005829|cytosol
pt2_03878	A	A1S	Potri.001G368100	Potri.001G368100(AS)	POPTR_0001s37680	sp|Q9FE17|SIR1_ARATH	NAD-dependent protein deacetylase SRT1 OS=Arabidopsis thaliana GN=SRT1 PE=2 SV=1	AT5G55760.1	| Symbols: SRT1 | sirtuin 1 | chr5:22567282-22570716 FORWARD LENGTH=473	LOC_Os04g20270.1	protein|transcriptional regulator Sir2 family protein, putative, expressed	NA	NA	GO:0006342|chromatin silencing GO:0006355|regulation of transcription, DNA-dependent GO:0006476|protein deacetylation	GO:0003677|DNA binding GO:0008270|zinc ion binding GO:0070403|NAD+ binding	GO:0005677|chromatin silencing complex GO:0005737|cytoplasm
pt2_03879	A	A1S	Potri.001G368200	Potri.001G368200(AS)	POPTR_0001s37690	NA	NA	AT5G55820.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Inner centromere protein, ARK-binding region (InterPro:IPR005635); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:22586287-22594035 FORWARD LENGTH=1826	NA	NA	NA	NA	GO:0000226|microtubule cytoskeleton organization GO:0006270|DNA replication initiation GO:0006275|regulation of DNA replication GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0009553|embryo sac development GO:0009909|regulation of flower development GO:0009957|epidermal cell fate specification GO:0010389|regulation of G2/M transition of mitotic cell cycle GO:0016570|histone modification GO:0031047|gene silencing by RNA GO:0048316|seed development GO:0048449|floral organ formation GO:0048451|petal formation GO:0048453|sepal formation GO:0051567|histone H3-K9 methylation GO:0051726|regulation of cell cycle	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_03880	A	A2S	Potri.001G368300	Potri.001G368300(AS) Potri.011G093700(DS)	POPTR_0001s37700	sp|Q9FHG4|LRKS7_ARATH	Probable L-type lectin-domain containing receptor kinase S.7 OS=Arabidopsis thaliana GN=LECRKS7 PE=2 SV=1	AT5G55830.1	| Symbols: | Concanavalin A-like lectin protein kinase family protein | chr5:22594655-22596700 FORWARD LENGTH=681	LOC_Os06g17490.1	protein|expressed protein	IMGA|Medtr5g095970.1	Lectin-domain containing receptor kinase A4.3 chr5 40923615-40925660 H EGN_Mt100125 20111014	GO:0000226|microtubule cytoskeleton organization GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_03881	A	A1S	Potri.001G368400	Potri.001G368400(AS)	POPTR_0001s37710	sp|Q9LG26|PARN_ARATH	Poly(A)-specific ribonuclease PARN OS=Arabidopsis thaliana GN=PARN PE=1 SV=2	AT1G55870.2	| Symbols: ATPARN, AHG2 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr1:20896184-20898359 FORWARD LENGTH=540	LOC_Os04g39260.2	protein|CAF1 family ribonuclease containing protein, putative, expressed	NA	NA	GO:0006950|response to stress GO:0009451|RNA modification GO:0009560|embryo sac egg cell differentiation GO:0009737|response to abscisic acid stimulus GO:0009751|response to salicylic acid stimulus	GO:0003676|nucleic acid binding GO:0004540|ribonuclease activity	GO:0005634|nucleus
pt2_03882	A	A1S	Potri.001G368500	Potri.001G368500(AS)	POPTR_0001s37720	sp|P72943|RSMB_SYNY3	Ribosomal RNA small subunit methyltransferase B OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=rsmB PE=3 SV=1	AT3G13180.1	| Symbols: | NOL1/NOP2/sun family protein / antitermination NusB domain-containing protein | chr3:4236326-4239966 REVERSE LENGTH=523	LOC_Os09g30100.1	protein|NOL1/NOP2/sun family protein, putative, expressed	IMGA|Medtr5g096020.1	Ribosomal RNA small subunit methyltransferase chr5 40943591-40935276 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006364|rRNA processing GO:0006399|tRNA metabolic process GO:0009658|chloroplast organization GO:0045036|protein targeting to chloroplast	GO:0003723|RNA binding	GO:0005737|cytoplasm
pt2_03883	A	A1S	Potri.001G368600	Potri.001G368600(AS)	POPTR_0001s37730	sp|Q8GY23|UPL1_ARATH	E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana GN=UPL1 PE=1 SV=3	AT1G55860.2	| Symbols: UPL1 | ubiquitin-protein ligase 1 | chr1:20879900-20892910 REVERSE LENGTH=3681	LOC_Os09g07900.1	protein|ubiquitin-protein ligase 1, putative, expressed	IMGA|contig_63891_1.1	E3 ubiquitin-protein ligase contig_63891 1271-5561 H PREDN 20111014	GO:0006464|cellular protein modification process GO:0006511|ubiquitin-dependent protein catabolic process GO:0016567|protein ubiquitination GO:0042787|protein ubiquitination involved in ubiquitin-dependent protein catabolic process	GO:0004842|ubiquitin-protein ligase activity GO:0016881|acid-amino acid ligase activity	GO:0000151|ubiquitin ligase complex GO:0005622|intracellular GO:0005634|nucleus GO:0005739|mitochondrion GO:0005829|cytosol GO:0009506|plasmodesma GO:0016020|membrane
pt2_03884	A	A2S	Potri.001G368600	Potri.001G368600(AS) Potri.011G094100(DS)	POPTR_0001s37730	sp|Q8GY23|UPL1_ARATH	E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana GN=UPL1 PE=1 SV=3	AT1G55860.2	| Symbols: UPL1 | ubiquitin-protein ligase 1 | chr1:20879900-20892910 REVERSE LENGTH=3681	LOC_Os09g07900.1	protein|ubiquitin-protein ligase 1, putative, expressed	IMGA|contig_63891_1.1	E3 ubiquitin-protein ligase contig_63891 1271-5561 H PREDN 20111014	GO:0006464|cellular protein modification process GO:0006511|ubiquitin-dependent protein catabolic process GO:0016567|protein ubiquitination GO:0042787|protein ubiquitination involved in ubiquitin-dependent protein catabolic process	GO:0004842|ubiquitin-protein ligase activity GO:0016881|acid-amino acid ligase activity	GO:0000151|ubiquitin ligase complex GO:0005622|intracellular GO:0005634|nucleus GO:0005739|mitochondrion GO:0005829|cytosol GO:0009506|plasmodesma GO:0016020|membrane
pt2_03885	A	A1S	Potri.001G368600	Potri.001G368600(AS)	POPTR_0001s37730	sp|Q8GY23|UPL1_ARATH	E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana GN=UPL1 PE=1 SV=3	AT1G55860.2	| Symbols: UPL1 | ubiquitin-protein ligase 1 | chr1:20879900-20892910 REVERSE LENGTH=3681	LOC_Os09g07900.1	protein|ubiquitin-protein ligase 1, putative, expressed	IMGA|contig_63891_1.1	E3 ubiquitin-protein ligase contig_63891 1271-5561 H PREDN 20111014	GO:0006464|cellular protein modification process GO:0006511|ubiquitin-dependent protein catabolic process GO:0016567|protein ubiquitination GO:0042787|protein ubiquitination involved in ubiquitin-dependent protein catabolic process	GO:0004842|ubiquitin-protein ligase activity GO:0016881|acid-amino acid ligase activity	GO:0000151|ubiquitin ligase complex GO:0005622|intracellular GO:0005634|nucleus GO:0005739|mitochondrion GO:0005829|cytosol GO:0009506|plasmodesma GO:0016020|membrane
pt2_03886	A	A1S	Potri.001G368800	Potri.001G368800(AS)	POPTR_0001s37740	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03887	C	C1S	Potri.001G368700	Potri.001G368700(CS)	sp|Q9LVQ5|PP432_ARATH	Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2	AT5G55840.1	| Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr5:22598038-22601688 FORWARD LENGTH=1136	LOC_Os03g40690.1	protein|PPR repeat containing protein, expressed	IMGA|Medtr5g090210.1	Pentatricopeptide repeat-containing protein chr5 38260030-38262180 E EGN_Mt100125 20111014	NA	NA	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_03888	A	A1S	Potri.001G368900	Potri.001G368900(AS)	POPTR_0001s37750	NA	NA	AT5G55850.3	| Symbols: NOI | RPM1-interacting protein 4 (RIN4) family protein | chr5:22603617-22604850 FORWARD LENGTH=95	LOC_Os09g07920.1	protein|NOI protein, nitrate-induced, putative, expressed	IMGA|Medtr5g096030.1	RPM1-interacting protein chr5 40945881-40948340 F EGN_Mt100125 20111014	GO:0006944|cellular membrane fusion GO:0010167|response to nitrate GO:0048193|Golgi vesicle transport	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_03889	A	A1S	Potri.001G369000	Potri.001G369000(AS)	POPTR_0001s37760	sp|A7SXK3|TMED_NEMVE	Transmembrane emp24 domain-containing protein OS=Nematostella vectensis GN=v1g194562 PE=3 SV=1	AT3G07680.1	| Symbols: | emp24/gp25L/p24 family/GOLD family protein | chr3:2455627-2456652 FORWARD LENGTH=208	LOC_Os09g32968.1	protein|emp24/gp25L/p24 family protein, putative, expressed	IMGA|Medtr5g098250.1	Transmembrane emp24 domain-containing protein chr5 41993605-41996902 F EGN_Mt100125 20111014	GO:0006886|intracellular protein transport GO:0034976|response to endoplasmic reticulum stress	GO:0008320|protein transmembrane transporter activity	GO:0005783|endoplasmic reticulum GO:0005789|endoplasmic reticulum membrane GO:0005794|Golgi apparatus GO:0016020|membrane GO:0030134|ER to Golgi transport vesicle
pt2_03890	A	A1S	Potri.001G369100	Potri.001G369100(AS)	POPTR_0001s37770	sp|Q8VZK9|CSLE1_ARATH	Cellulose synthase-like protein E1 OS=Arabidopsis thaliana GN=CSLE1 PE=1 SV=1	AT1G55850.1	| Symbols: ATCSLE1, CSLE1 | cellulose synthase like E1 | chr1:20876752-20879414 FORWARD LENGTH=729	LOC_Os09g30130.1	protein|CSLE6 - cellulose synthase-like family E, expressed	IMGA|Medtr1g039450.1	Cellulose synthase D-like protein chr1 10647606-10642857 H EGN_Mt100125 20111014	GO:0000271|polysaccharide biosynthetic process GO:0030244|cellulose biosynthetic process GO:0046482|para-aminobenzoic acid metabolic process	GO:0016757|transferase activity, transferring glycosyl groups GO:0016759|cellulose synthase activity GO:0016760|cellulose synthase (UDP-forming) activity	GO:0005783|endoplasmic reticulum GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0016020|membrane
pt2_03891	A	A1S	Potri.001G369200	Potri.001G369200(AS)	POPTR_0001s37780	sp|Q9LVQ4|Y5586_ARATH	WEB family protein At5g55860 OS=Arabidopsis thaliana GN=At5g55860 PE=2 SV=1	AT5G55860.1	| Symbols: | Plant protein of unknown function (DUF827) | chr5:22610146-22612166 FORWARD LENGTH=649	LOC_Os12g17310.1	protein|prefoldin, putative, expressed	IMGA|Medtr5g096080.1	Myosin heavy chain-like protein chr5 40969079-40971808 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005886|plasma membrane
pt2_03892	A	A1S	Potri.001G369300	Potri.001G369300(AS)	POPTR_0001s37800	sp|A5DK49|AIM32_PICGU	Altered inheritance of mitochondria protein 32 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN=AIM32 PE=3 SV=2	AT4G26620.1	| Symbols: | Sucrase/ferredoxin-like family protein | chr4:13427599-13429877 REVERSE LENGTH=443	LOC_Os02g49320.1	protein|sucrase-related, putative, expressed	IMGA|Medtr5g096090.1	Sucrase-like protein chr5 40975452-40979612 H EGN_Mt100125 20111014	GO:0008150|biological_process GO:0010048|vernalization response	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005829|cytosol
pt2_03893	A	A1S	Potri.001G369400	Potri.001G369400(AS)	POPTR_0001s37810	sp|Q75DK1|SEC14_ASHGO	SEC14 cytosolic factor OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SEC14 PE=3 SV=1	AT1G55840.1	| Symbols: | Sec14p-like phosphatidylinositol transfer family protein | chr1:20873891-20876018 FORWARD LENGTH=325	LOC_Os02g10650.1	protein|CRAL/TRIO domain containing protein, expressed	IMGA|Medtr5g012460.1	Sec14 cytosolic factor chr5 3489519-3486775 E EGN_Mt100125 20111014	GO:0006810|transport	GO:0005215|transporter activity	GO:0005575|cellular_component GO:0005794|Golgi apparatus
pt2_03894	A	A1S	Potri.001G369500	Potri.001G369500(AS)	POPTR_0001s37820	sp|Q32L22|RPAC1_BOVIN	DNA-directed RNA polymerases I and III subunit RPAC1 OS=Bos taurus GN=POLR1C PE=2 SV=1	AT1G60620.1	| Symbols: ATRPAC43, RPAC43 | RNA polymerase I subunit 43 | chr1:22331225-22333370 FORWARD LENGTH=385	LOC_Os03g18410.1	protein|DNA-directed RNA polymerase subunit, putative, expressed	NA	NA	GO:0006351|transcription, DNA-dependent GO:0006626|protein targeting to mitochondrion	GO:0003677|DNA binding GO:0003899|DNA-directed RNA polymerase activity GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_03895	A	A1S	Potri.001G369600	Potri.001G369600(AS)	POPTR_0001s37830	sp|P46087|NOP2_HUMAN	Putative ribosomal RNA methyltransferase NOP2 OS=Homo sapiens GN=NOP2 PE=1 SV=2	AT4G26600.1	| Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr4:13419629-13423418 FORWARD LENGTH=671	LOC_Os02g49270.1	protein|NOL1/NOP2/sun family protein, putative, expressed	IMGA|Medtr5g096020.1	Ribosomal RNA small subunit methyltransferase chr5 40943591-40935276 E EGN_Mt100125 20111014	GO:0006364|rRNA processing GO:0006606|protein import into nucleus	GO:0003723|RNA binding GO:0008168|methyltransferase activity GO:0008757|S-adenosylmethionine-dependent methyltransferase activity	GO:0005634|nucleus GO:0005730|nucleolus
pt2_03896	A	A2S	Potri.001G369700	Potri.001G369700(AS) Potri.001G370100(DS)	POPTR_0001s37840	sp|Q9SUA4|OPT5_ARATH	Oligopeptide transporter 5 OS=Arabidopsis thaliana GN=OPT5 PE=2 SV=1	AT4G26590.1	| Symbols: ATOPT5, OPT5 | oligopeptide transporter 5 | chr4:13414134-13416850 REVERSE LENGTH=753	LOC_Os08g38400.1	protein|oligopeptide transporter, putative, expressed	IMGA|Medtr5g096250.1	Oligopeptide transporter OPT family chr5 41040662-41045419 H EGN_Mt100125 20111014	GO:0006857|oligopeptide transport GO:0055085|transmembrane transport	GO:0015198|oligopeptide transporter activity	GO:0005737|cytoplasm GO:0016020|membrane
pt2_03897	A	A1S	Potri.001G369800	Potri.001G369800(AS)	POPTR_0001s37850	NA	NA	NA	NA	NA	NA	IMGA|Medtr1g058820.1	TNP1 chr1 15163333-15167052 E EGN_Mt100125 20111014	NA	NA	NA
pt2_03898	A	A1S	Potri.001G369900	Potri.001G369900(AS)	POPTR_0001s37860	sp|Q9FJY7|PP449_ARATH	Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1	AT5G66520.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:26551879-26553741 FORWARD LENGTH=620	LOC_Os07g44299.1	protein|pentatricopeptide, putative, expressed	IMGA|Medtr5g006420.1	Pentatricopeptide repeat-containing protein chr5 674856-677668 E EGN_Mt100125 20111014	GO:0008150|biological_process GO:0016556|mRNA modification	NA	GO:0005575|cellular_component
pt2_03899	C	C1S	Potri.001G370000	Potri.001G370000(CS)	sp|Q9FG71|EMC89_ARATH	ER membrane protein complex subunit 8/9 homolog OS=Arabidopsis thaliana GN=EMB2731 PE=2 SV=1	AT5G55940.1	| Symbols: emb2731 | Uncharacterised protein family (UPF0172) | chr5:22656256-22657894 REVERSE LENGTH=208	LOC_Os04g20230.1	protein|neighbor of COX4, putative, expressed	IMGA|Medtr5g096260.2	hypothetical protein chr5 41049338-41046937 F EGN_Mt100125 20111014	GO:0009793|embryo development ending in seed dormancy	GO:0003674|molecular_function	GO:0005783|endoplasmic reticulum
pt2_03900	C	C2S	Potri.001G370200	Potri.001G370200(CS) Potri.001G370000(CS)	sp|Q9FG71|EMC89_ARATH	ER membrane protein complex subunit 8/9 homolog OS=Arabidopsis thaliana GN=EMB2731 PE=2 SV=1	AT5G55940.1	| Symbols: emb2731 | Uncharacterised protein family (UPF0172) | chr5:22656256-22657894 REVERSE LENGTH=208	LOC_Os04g20230.1	protein|neighbor of COX4, putative, expressed	IMGA|Medtr5g096260.1	hypothetical protein chr5 41049338-41046937 F EGN_Mt100125 20111014	GO:0009793|embryo development ending in seed dormancy	GO:0003674|molecular_function	GO:0005783|endoplasmic reticulum
pt2_03901	A	A2S	Potri.001G370100	Potri.001G370100(AS) Potri.001G369700(DS)	POPTR_0001s37890	sp|Q9SUA4|OPT5_ARATH	Oligopeptide transporter 5 OS=Arabidopsis thaliana GN=OPT5 PE=2 SV=1	AT4G26590.1	| Symbols: ATOPT5, OPT5 | oligopeptide transporter 5 | chr4:13414134-13416850 REVERSE LENGTH=753	LOC_Os08g38400.1	protein|oligopeptide transporter, putative, expressed	IMGA|Medtr5g096250.1	Oligopeptide transporter OPT family chr5 41040662-41045419 H EGN_Mt100125 20111014	GO:0006857|oligopeptide transport GO:0055085|transmembrane transport	GO:0015198|oligopeptide transporter activity	GO:0005737|cytoplasm GO:0016020|membrane
pt2_03902	A	A2S	Potri.001G370200	Potri.001G370200(AS) Potri.001G370000(BS)	POPTR_0001s37910	sp|Q9FG71|EMC89_ARATH	ER membrane protein complex subunit 8/9 homolog OS=Arabidopsis thaliana GN=EMB2731 PE=2 SV=1	AT5G55940.1	| Symbols: emb2731 | Uncharacterised protein family (UPF0172) | chr5:22656256-22657894 REVERSE LENGTH=208	LOC_Os04g20230.1	protein|neighbor of COX4, putative, expressed	IMGA|Medtr5g096260.1	hypothetical protein chr5 41049338-41046937 F EGN_Mt100125 20111014	GO:0009793|embryo development ending in seed dormancy	GO:0003674|molecular_function	GO:0005783|endoplasmic reticulum
pt2_03903	A	A1S	Potri.001G370300	Potri.001G370300(AS)	POPTR_0001s37920	sp|Q99383|HRP1_YEAST	Nuclear polyadenylated RNA-binding protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HRP1 PE=1 SV=1	AT3G13224.2	| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr3:4254848-4256621 FORWARD LENGTH=358	LOC_Os08g23120.1	protein|RNA recognition motif containing protein, putative, expressed	IMGA|Medtr5g097580.1	Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like protein chr5 41711192-41715991 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03904	A	A2S	Potri.T166700	Potri.T166700(AS) Potri.001G370400(AS)	POPTR_0001s37930	sp|Q6NUB2|CW15A_XENLA	Protein CWC15 homolog A OS=Xenopus laevis GN=cwc15-a PE=2 SV=1	AT3G13200.1	| Symbols: EMB2769 | Cwf15 / Cwc15 cell cycle control family protein | chr3:4242239-4243976 FORWARD LENGTH=230	LOC_Os06g01700.1	protein|CWC15 homolog A, putative, expressed	NA	NA	GO:0000398|mRNA splicing, via spliceosome	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005681|spliceosomal complex
pt2_03905	A	A1S	Potri.001G370500	Potri.001G370500(AS)	POPTR_0001s37940	sp|Q9H330|TM245_HUMAN	Transmembrane protein 245 OS=Homo sapiens GN=TMEM245 PE=1 SV=2	AT5G55960.1	| Symbols: | unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0118 (InterPro:IPR002549); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:22662726-22664762 FORWARD LENGTH=648	LOC_Os06g19390.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_03906	A	A1S	Potri.001G370600	Potri.001G370600(AS)	POPTR_0001s37950	sp|Q9LK50|AB26G_ARATH	ABC transporter G family member 26 OS=Arabidopsis thaliana GN=ABCG26 PE=3 SV=2	AT3G13220.1	| Symbols: WBC27, ABCG26 | ABC-2 type transporter family protein | chr3:4247968-4250703 REVERSE LENGTH=685	LOC_Os06g40550.1	protein|ABC-2 type transporter domain containing protein, expressed	IMGA|Medtr5g096390.1	ABC transporter G family member chr5 41103593-41108076 H EGN_Mt100125 20111014	GO:0009555|pollen development GO:0010152|pollen maturation GO:0010584|pollen exine formation	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0005634|nucleus GO:0005886|plasma membrane GO:0016020|membrane
pt2_03907	A	A1S	Potri.001G370700	Potri.001G370700(AS)	POPTR_0001s37960	sp|Q9JIG7|CCD22_MOUSE	Coiled-coil domain-containing protein 22 OS=Mus musculus GN=Ccdc22 PE=1 SV=1	AT1G55830.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF812 (InterPro:IPR008530). | chr1:20867918-20870205 REVERSE LENGTH=493	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_03908	A	A1S	Potri.001G370800	Potri.001G370800(AS)	POPTR_0001s37970	sp|Q8RXL8|Y1689_ARATH	Uncharacterized membrane protein At1g06890 OS=Arabidopsis thaliana GN=At1g06890 PE=1 SV=1	AT5G55950.1	| Symbols: | Nucleotide/sugar transporter family protein | chr5:22658411-22660253 REVERSE LENGTH=398	LOC_Os02g49260.1	protein|transporter-related, putative, expressed	IMGA|Medtr5g096310.1	Solute carrier family 35 member E3 chr5 41077330-41074635 E EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0055085|transmembrane transport	NA	GO:0016020|membrane
pt2_03909	A	A2S	Potri.001G370900	Potri.001G370900(AS) Potri.011G079800(DS)	POPTR_0001s37980	NA	NA	AT3G07660.1	| Symbols: | Kinase-related protein of unknown function (DUF1296) | chr3:2445275-2450372 REVERSE LENGTH=841	LOC_Os09g08670.1	protein|protein of unknown function DUF1296 domain containing protein, expressed	IMGA|Medtr5g096290.1	hypothetical protein chr5 41060656-41068633 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03910	A	A1S	Potri.001G371000	Potri.001G371000(AS)	POPTR_0001s37990	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03911	A	A2S	Potri.001G371200	Potri.001G371200(AS) Potri.011G094800(DS)	POPTR_0001s38010	sp|Q93Z92|RING4_ARATH	E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana GN=At4g11680 PE=2 SV=1	AT5G55970.2	| Symbols: | RING/U-box superfamily protein | chr5:22668019-22669312 FORWARD LENGTH=343	LOC_Os01g50750.1	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr5g096410.1	RING finger protein chr5 41115413-41117405 F EGN_Mt100125 20111014	NA	GO:0008270|zinc ion binding	NA
pt2_03912	A	A1S	Potri.001G371300	Potri.001G371300(AS)	POPTR_0001s38020	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0009414|response to water deprivation GO:0009651|response to salt stress GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0010255|glucose mediated signaling pathway GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0043565|sequence-specific DNA binding GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_03913	B	B1S	Potri.001G371400	Potri.001G371400(BS)	POPTR_0001s38030	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process GO:0009693|ethylene biosynthetic process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_03914	A	A1S	Potri.001G371500	Potri.001G371500(AS)	POPTR_0001s38040	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_03915	A	A1S	Potri.001G371600	Potri.001G371600(AS)	POPTR_0001s38050	NA	NA	AT3G13225.2	| Symbols: | WW domain-containing protein | chr3:4258928-4262853 REVERSE LENGTH=892	LOC_Os06g19470.3	protein|WW domain containing protein, expressed	NA	NA	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03916	A	A1S	Potri.001G371600	Potri.001G371600(AS)	POPTR_0001s38050	NA	NA	AT3G13225.2	| Symbols: | WW domain-containing protein | chr3:4258928-4262853 REVERSE LENGTH=892	LOC_Os06g19470.3	protein|WW domain containing protein, expressed	NA	NA	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03917	C	C1S	Potri.001G371600	Potri.001G371600(CS)	NA	NA	AT3G13225.2	| Symbols: | WW domain-containing protein | chr3:4258928-4262853 REVERSE LENGTH=892	LOC_Os06g19470.3	protein|WW domain containing protein, expressed	NA	NA	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03918	A	A1S	Potri.001G371700	Potri.001G371700(AS)	POPTR_0001s38060	sp|Q8LAS7|CNBL2_ARATH	Calcineurin B-like protein 2 OS=Arabidopsis thaliana GN=CBL2 PE=1 SV=2	AT5G55990.1	| Symbols: CBL2, ATCBL2 | calcineurin B-like protein 2 | chr5:22672189-22673579 FORWARD LENGTH=226	LOC_Os03g42840.1	protein|calcineurin B, putative, expressed	IMGA|Medtr5g096420.1	Calcineurin B-like protein chr5 41120501-41124331 F EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0006355|regulation of transcription, DNA-dependent GO:0006612|protein targeting to membrane GO:0009617|response to bacterium GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0019722|calcium-mediated signaling GO:0031348|negative regulation of defense response GO:0035304|regulation of protein dephosphorylation GO:0055075|potassium ion homeostasis	GO:0005509|calcium ion binding GO:0005515|protein binding	GO:0005773|vacuole GO:0009705|plant-type vacuole membrane GO:0016020|membrane GO:0022626|cytosolic ribosome
pt2_03919	A	A1S	Potri.001G371800	Potri.001G371800(AS)	POPTR_0001s38070	NA	NA	AT4G21740.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G30515.1); Has 20 Blast hits to 20 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:11545926-11546396 FORWARD LENGTH=156	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_03920	A	A1S	Potri.001G371900	Potri.001G371900(AS)	POPTR_0001s38080	sp|Q41014|FENR2_PEA	Ferredoxin--NADP reductase, root isozyme, chloroplastic OS=Pisum sativum PE=2 SV=2	AT4G05390.1	| Symbols: ATRFNR1, RFNR1 | root FNR 1 | chr4:2738839-2740483 REVERSE LENGTH=378	LOC_Os03g57120.1	protein|ferredoxin--NADP reductase, chloroplast precursor, putative, expressed	IMGA|Medtr5g022300.1	Ferredoxin-NADP reductase chr5 8532207-8535588 F EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0004324|ferredoxin-NADP+ reductase activity GO:0005507|copper ion binding GO:0016491|oxidoreductase activity GO:0050660|flavin adenine dinucleotide binding GO:0050661|NADP binding	GO:0009507|chloroplast GO:0042651|thylakoid membrane
pt2_03921	A	A3S	Potri.001G372000	Potri.001G372000(AS) Potri.011G098500(DS) Potri.011G100900(DS)	POPTR_0001s38090	sp|Q9FVJ3|AGD12_ARATH	ADP-ribosylation factor GTPase-activating protein AGD12 OS=Arabidopsis thaliana GN=AGD12 PE=1 SV=1	AT4G21160.4	| Symbols: ZAC | Calcium-dependent ARF-type GTPase activating protein family | chr4:11284694-11286532 FORWARD LENGTH=337	LOC_Os06g40704.3	protein|stromal membrane-associated protein, putative, expressed	IMGA|contig_14696_1.1	C2 domain-containing protein-like protein contig_14696 1703-414 E PREDN 20111014	GO:0000902|cell morphogenesis GO:0006605|protein targeting GO:0006623|protein targeting to vacuole GO:0006886|intracellular protein transport GO:0006944|cellular membrane fusion GO:0016049|cell growth GO:0016192|vesicle-mediated transport GO:0016197|endosomal transport GO:0032312|regulation of ARF GTPase activity GO:0048193|Golgi vesicle transport	GO:0005543|phospholipid binding GO:0008060|ARF GTPase activator activity GO:0008270|zinc ion binding	GO:0005634|nucleus GO:0005773|vacuole GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0016020|membrane
pt2_03922	A	A1S	Potri.001G372100	Potri.001G372100(AS)	POPTR_0001s38100	sp|Q84JP1|NFYA7_ARATH	Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana GN=NFYA7 PE=2 SV=1	AT1G30500.2	| Symbols: NF-YA7 | nuclear factor Y, subunit A7 | chr1:10804736-10805896 REVERSE LENGTH=190	LOC_Os12g41880.2	protein|nuclear transcription factor Y subunit, putative, expressed	IMGA|Medtr1g056530.1	Nuclear transcription factor Y subunit A-10 chr1 14860365-14857641 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0016036|cellular response to phosphate starvation GO:0019375|galactolipid biosynthetic process GO:0045892|negative regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus GO:0016602|CCAAT-binding factor complex
pt2_03923	A	A1S	Potri.001G372100	Potri.001G372100(AS)	POPTR_0001s38100	sp|Q84JP1|NFYA7_ARATH	Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana GN=NFYA7 PE=2 SV=1	AT1G30500.2	| Symbols: NF-YA7 | nuclear factor Y, subunit A7 | chr1:10804736-10805896 REVERSE LENGTH=190	LOC_Os12g41880.2	protein|nuclear transcription factor Y subunit, putative, expressed	IMGA|Medtr1g056530.1	Nuclear transcription factor Y subunit A-10 chr1 14860365-14857641 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0016036|cellular response to phosphate starvation GO:0019375|galactolipid biosynthetic process GO:0045892|negative regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus GO:0016602|CCAAT-binding factor complex
pt2_03924	A	A1S	Potri.001G372100	Potri.001G372100(AS)	POPTR_0001s38100	sp|Q84JP1|NFYA7_ARATH	Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana GN=NFYA7 PE=2 SV=1	AT1G30500.2	| Symbols: NF-YA7 | nuclear factor Y, subunit A7 | chr1:10804736-10805896 REVERSE LENGTH=190	LOC_Os12g41880.2	protein|nuclear transcription factor Y subunit, putative, expressed	IMGA|Medtr1g056530.1	Nuclear transcription factor Y subunit A-10 chr1 14860365-14857641 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0016036|cellular response to phosphate starvation GO:0019375|galactolipid biosynthetic process GO:0045892|negative regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus GO:0016602|CCAAT-binding factor complex
pt2_03925	C	C1S	Potri.001G372100	Potri.001G372100(CS)	sp|Q84JP1|NFYA7_ARATH	Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana GN=NFYA7 PE=2 SV=1	AT1G30500.2	| Symbols: NF-YA7 | nuclear factor Y, subunit A7 | chr1:10804736-10805896 REVERSE LENGTH=190	LOC_Os12g41880.2	protein|nuclear transcription factor Y subunit, putative, expressed	IMGA|Medtr1g056530.1	Nuclear transcription factor Y subunit A-10 chr1 14860365-14857641 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0016036|cellular response to phosphate starvation GO:0019375|galactolipid biosynthetic process GO:0045892|negative regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus GO:0016602|CCAAT-binding factor complex
pt2_03926	A	A1S	Potri.001G372200	Potri.001G372200(AS)	POPTR_0001s38110	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03927	A	A2S	Potri.001G372300	Potri.001G372300(AS) Potri.011G098300(DS)	POPTR_0001s38120	sp|O04291|ATB14_ARATH	Homeobox-leucine zipper protein ATHB-14 OS=Arabidopsis thaliana GN=ATHB-14 PE=1 SV=1	AT2G34710.1	| Symbols: PHB, ATHB14, ATHB-14, PHB-1D | Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein | chr2:14639548-14643993 REVERSE LENGTH=852	LOC_Os03g43930.2	protein|START domain containing protein, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0007062|sister chromatid cohesion GO:0007131|reciprocal meiotic recombination GO:0007155|cell adhesion GO:0009640|photomorphogenesis GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009855|determination of bilateral symmetry GO:0009880|embryonic pattern specification GO:0009909|regulation of flower development GO:0009933|meristem structural organization GO:0009944|polarity specification of adaxial/abaxial axis GO:0009955|adaxial/abaxial pattern specification GO:0009965|leaf morphogenesis GO:0010014|meristem initiation GO:0010051|xylem and phloem pattern formation GO:0010072|primary shoot apical meristem specification GO:0010073|meristem maintenance GO:0010075|regulation of meristem growth GO:0010090|trichome morphogenesis GO:0010162|seed dormancy process GO:0010182|sugar mediated signaling pathway GO:0010228|vegetative to reproductive phase transition of meristem GO:0010431|seed maturation GO:0010564|regulation of cell cycle process GO:0016049|cell growth GO:0016567|protein ubiquitination GO:0019915|lipid storage GO:0033044|regulation of chromosome organization GO:0042138|meiotic DNA double-strand break formation GO:0045010|actin nucleation GO:0045132|meiotic chromosome segregation GO:0045595|regulation of cell differentiation GO:0048366|leaf development GO:0048589|developmental growth GO:0048765|root hair cell differentiation GO:0048825|cotyledon development GO:0050826|response to freezing GO:0071555|cell wall organization GO:0080060|integument development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_03928	C	C1S	Potri.018G032800	Potri.018G032800(CS)	NA	NA	AT3G17450.1	| Symbols: | hAT dimerisation domain-containing protein | chr3:5972793-5975684 REVERSE LENGTH=877	LOC_Os01g28200.1	protein|transposon protein, putative, unclassified, expressed	IMGA|Medtr5g012510.1	hypothetical protein chr5 3512350-3509693 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003677|DNA binding GO:0046983|protein dimerization activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03929	A	A1S	Potri.001G372400	Potri.001G372400(AS)	POPTR_0001s38130	sp|Q9ZRF1|MTDH_FRAAN	Probable mannitol dehydrogenase OS=Fragaria ananassa GN=CAD PE=2 SV=1	AT4G39330.1	| Symbols: ATCAD9, CAD9 | cinnamyl alcohol dehydrogenase 9 | chr4:18291268-18292772 FORWARD LENGTH=360	LOC_Os10g29470.1	protein|dehydrogenase, putative, expressed	IMGA|Medtr5g031390.1	Cinnamyl alcohol dehydrogenase chr5 13028999-13026969 E EGN_Mt100125 20111014	GO:0009809|lignin biosynthetic process GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0008270|zinc ion binding GO:0016491|oxidoreductase activity GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups GO:0045551|cinnamyl-alcohol dehydrogenase activity	GO:0005737|cytoplasm GO:0048046|apoplast
pt2_03930	A	A1S	Potri.001G372500	Potri.001G372500(AS)	POPTR_0001s38140	sp|O80831|BAM7_ARATH	Beta-amylase 7 OS=Arabidopsis thaliana GN=BAM7 PE=2 SV=2	AT2G45880.1	| Symbols: BMY4, BAM7 | beta-amylase 7 | chr2:18878674-18881824 REVERSE LENGTH=691	LOC_Os02g03690.1	protein|beta-amylase, putative, expressed	IMGA|Medtr5g026210.2	Beta-amylase chr5 10516335-10509636 F EGN_Mt100125 20111014	GO:0000272|polysaccharide catabolic process GO:0005975|carbohydrate metabolic process GO:0010048|vernalization response GO:0048831|regulation of shoot development	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0003824|catalytic activity GO:0016161|beta-amylase activity GO:0043169|cation binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_03931	A	A1S	Potri.001G372600	Potri.001G372600(AS)	POPTR_0001s38150	sp|P42698|DR111_ARATH	DNA-damage-repair/toleration protein DRT111, chloroplastic OS=Arabidopsis thaliana GN=DRT111 PE=2 SV=2	AT1G30480.1	| Symbols: DRT111 | D111/G-patch domain-containing protein | chr1:10790315-10792423 FORWARD LENGTH=387	LOC_Os01g34190.1	protein|G-patch domain containing protein, expressed	NA	NA	GO:0000724|double-strand break repair via homologous recombination GO:0006281|DNA repair GO:0006312|mitotic recombination GO:0006355|regulation of transcription, DNA-dependent GO:0009560|embryo sac egg cell differentiation GO:0010212|response to ionizing radiation GO:0043687|post-translational protein modification GO:0045893|positive regulation of transcription, DNA-dependent	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0009507|chloroplast
pt2_03932	A	A1S	Potri.001G372700	Potri.001G372700(AS)	POPTR_0001s38160	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03933	G	G1	NA	NA	POPTR_0001s38170	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03934	A	A1S	Potri.001G372800	Potri.001G372800(AS)	POPTR_0001s38180	NA	NA	AT3G15115.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53180.1); Has 47 Blast hits to 47 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). | chr3:5086219-5087352 REVERSE LENGTH=339	NA	NA	IMGA|contig_51777_2.1	Unknown protein contig_51777 1984-15 F PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03935	D	D1S	Potri.001G372900	Potri.001G372900(DS)	POPTR_0001s38190	NA	NA	AT5G46060.1	| Symbols: | Protein of unknown function, DUF599 | chr5:18681533-18682459 FORWARD LENGTH=248	LOC_Os08g28970.1	protein|expressed protein	IMGA|Medtr5g068640.1	hypothetical protein chr5 28084625-28083277 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_03936	A	A1S	Potri.001G373000	Potri.001G373000(AS)	POPTR_0001s38200	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03937	A	A1S	Potri.001G373100	Potri.001G373100(AS)	POPTR_0001s38210	NA	NA	AT3G15095.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 9762 Blast hits to 6439 proteins in 764 species: Archae - 77; Bacteria - 1339; Metazoa - 3211; Fungi - 718; Plants - 437; Viruses - 131; Other Eukaryotes - 3849 (source: NCBI BLink). | chr3:5081996-5084050 FORWARD LENGTH=684	LOC_Os06g24540.1	protein|expressed protein	NA	NA	GO:0010207|photosystem II assembly	GO:0003674|molecular_function	GO:0005634|nucleus GO:0009507|chloroplast
pt2_03938	A	A1S	Potri.001G373200	Potri.001G373200(AS)	POPTR_0001s38220	sp|Q0VC50|RT4I1_BOVIN	Reticulon-4-interacting protein 1, mitochondrial OS=Bos taurus GN=RTN4IP1 PE=2 SV=1	AT3G15090.1	| Symbols: | GroES-like zinc-binding alcohol dehydrogenase family protein | chr3:5076847-5078870 FORWARD LENGTH=366	LOC_Os01g54940.1	protein|dehydrogenase, putative, expressed	IMGA|AC225458_92.1	Quinone oxidoreductase-like protein AC225458.11 328100-329713 H EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0008270|zinc ion binding GO:0016491|oxidoreductase activity	GO:0005739|mitochondrion
pt2_03939	R	R	NA	NA	POPTR_0001s38230	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03940	A	A1S	Potri.001G373400	Potri.001G373400(AS)	POPTR_0001s38240	sp|Q8LHP0|ELOF1_ORYSJ	Transcription elongation factor 1 homolog OS=Oryza sativa subsp. japonica GN=Os07g0631100 PE=3 SV=1	AT5G46030.1	| Symbols: | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF701, zinc-binding putative (InterPro:IPR007808); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:18670531-18671138 FORWARD LENGTH=120	LOC_Os02g04160.1	protein|transcription elongation factor 1, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_03941	A	A1S	Potri.001G373500	Potri.001G373500(AS)	POPTR_0001s38250	sp|Q9GZR2|REXO4_HUMAN	RNA exonuclease 4 OS=Homo sapiens GN=REXO4 PE=1 SV=2	AT3G15080.1	| Symbols: | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr3:5074319-5076327 FORWARD LENGTH=275	LOC_Os08g28980.2	protein|exonuclease, putative, expressed	NA	NA	GO:0009165|nucleotide biosynthetic process	GO:0003676|nucleic acid binding GO:0004527|exonuclease activity	GO:0005622|intracellular GO:0005737|cytoplasm
pt2_03942	B	B1S	Potri.001G373600	Potri.001G373600(BS)	POPTR_0001s38260	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005829|cytosol
pt2_03943	A	A2S	Potri.001G373800	Potri.001G373800(AS) Potri.001G373700(AA)	POPTR_0001s38270	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03944	A	A1S	Potri.001G373700	Potri.001G373700(AS)	POPTR_0001s38280	sp|Q8L649|BB_ARATH	E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana GN=BB PE=1 SV=1	AT1G53190.2	| Symbols: | RING/U-box superfamily protein | chr1:19838072-19840003 FORWARD LENGTH=494	LOC_Os01g47740.3	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr1g019200.1	Zinc finger protein chr1 5896776-5903343 E EGN_Mt100125 20111014	NA	GO:0008270|zinc ion binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_03945	A	A1S	Potri.001G373900	Potri.001G373900(AS)	POPTR_0001s38290	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_03946	A	A1S	Potri.001G374000	Potri.001G374000(AS)	POPTR_0001s38300	sp|Q9FJH0|RAA1F_ARATH	Ras-related protein RABA1f OS=Arabidopsis thaliana GN=RABA1F PE=2 SV=1	AT5G60860.1	| Symbols: AtRABA1f, RABA1f | RAB GTPase homolog A1F | chr5:24484750-24485565 FORWARD LENGTH=217	LOC_Os05g48980.1	protein|ras-related protein, putative, expressed	IMGA|contig_80534_1.1	Ras-related protein Rab-25 contig_80534 213-2592 E PREDN 20111014	GO:0007264|small GTPase mediated signal transduction GO:0015031|protein transport GO:0016192|vesicle-mediated transport	GO:0005525|GTP binding	NA
pt2_03947	A	A1S	Potri.001G374100	Potri.001G374100(AS)	POPTR_0001s38310	sp|Q9ZRA2|HGD_ARATH	Homogentisate 1,2-dioxygenase OS=Arabidopsis thaliana GN=HGO PE=2 SV=2	AT5G54080.2	| Symbols: HGO | homogentisate 1,2-dioxygenase | chr5:21945920-21948070 FORWARD LENGTH=461	LOC_Os06g01360.1	protein|homogentisate 1,2-dioxygenase, putative, expressed	NA	NA	GO:0006559|L-phenylalanine catabolic process GO:0006570|tyrosine metabolic process GO:0006572|tyrosine catabolic process GO:0006635|fatty acid beta-oxidation GO:0009744|response to sucrose stimulus GO:0009750|response to fructose stimulus GO:0015996|chlorophyll catabolic process GO:0016558|protein import into peroxisome matrix GO:0055114|oxidation-reduction process	GO:0004411|homogentisate 1,2-dioxygenase activity	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_03948	A	A1S	Potri.001G374200	Potri.001G374200(AS)	POPTR_0001s38320	sp|Q9MA75|VIP1_ARATH	Transcription factor VIP1 OS=Arabidopsis thaliana GN=VIP1 PE=1 SV=1	AT3G58120.1	| Symbols: ATBZIP61, BZIP61 | Basic-leucine zipper (bZIP) transcription factor family protein | chr3:21521289-21523078 REVERSE LENGTH=329	LOC_Os01g55150.1	protein|bZIP transcription factor domain containing protein, expressed	IMGA|Medtr5g075390.1	Transcription factor RF2b chr5 31048502-31045199 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009410|response to xenobiotic stimulus GO:0030968|endoplasmic reticulum unfolded protein response GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_03949	A	A1S	Potri.001G374300	Potri.001G374300(AS)	POPTR_0001s38330	sp|Q8LGN0|GLR27_ARATH	Glutamate receptor 2.7 OS=Arabidopsis thaliana GN=GLR2.7 PE=2 SV=3	AT2G29120.1	| Symbols: ATGLR2.7, GLR2.7 | glutamate receptor 2.7 | chr2:12511479-12515893 REVERSE LENGTH=952	LOC_Os06g06130.1	protein|glutamate receptor, putative, expressed	IMGA|Medtr5g059920.1	Glutamate receptor 2.7 chr5 24157418-24161618 H EGN_Mt100125 20111014	GO:0006810|transport GO:0006874|cellular calcium ion homeostasis GO:0009416|response to light stimulus GO:0009627|systemic acquired resistance GO:0034976|response to endoplasmic reticulum stress	GO:0004970|ionotropic glutamate receptor activity GO:0005215|transporter activity GO:0005217|intracellular ligand-gated ion channel activity GO:0005234|extracellular-glutamate-gated ion channel activity	GO:0005634|nucleus GO:0005773|vacuole GO:0016020|membrane
pt2_03950	A	A1S	Potri.001G374400	Potri.001G374400(AS)	POPTR_0001s38340	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03951	A	A2S	Potri.001G374500	Potri.001G374500(AS) Potri.009G104700(BS)	POPTR_0001s38350	sp|Q9SX78|CXE2_ARATH	Probable carboxylesterase 2 OS=Arabidopsis thaliana GN=CXE2 PE=2 SV=1	AT1G47480.1	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr1:17417623-17419296 FORWARD LENGTH=314	LOC_Os09g28650.1	protein|gibberellin receptor, putative, expressed	IMGA|Medtr5g005920.1	Neutral cholesterol ester hydrolase chr5 435639-436637 H EGN_Mt100125 20111014	GO:0008152|metabolic process GO:0048765|root hair cell differentiation	GO:0016787|hydrolase activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03952	A	A4S	Potri.001G374600	Potri.001G374600(AS) Potri.001G374700(DS) Potri.001G375000(DS) Potri.001G375100(DS)	POPTR_0001s38360	sp|Q8LGN0|GLR27_ARATH	Glutamate receptor 2.7 OS=Arabidopsis thaliana GN=GLR2.7 PE=2 SV=3	AT2G29120.1	| Symbols: ATGLR2.7, GLR2.7 | glutamate receptor 2.7 | chr2:12511479-12515893 REVERSE LENGTH=952	LOC_Os06g06130.1	protein|glutamate receptor, putative, expressed	IMGA|Medtr5g059920.1	Glutamate receptor 2.7 chr5 24157418-24161618 H EGN_Mt100125 20111014	GO:0006810|transport GO:0006874|cellular calcium ion homeostasis GO:0009416|response to light stimulus GO:0009627|systemic acquired resistance GO:0034976|response to endoplasmic reticulum stress	GO:0004970|ionotropic glutamate receptor activity GO:0005215|transporter activity GO:0005217|intracellular ligand-gated ion channel activity GO:0005234|extracellular-glutamate-gated ion channel activity	GO:0005634|nucleus GO:0005773|vacuole GO:0016020|membrane
pt2_03953	A	A1S	Potri.001G374700	Potri.001G374700(AS)	POPTR_0001s38370	sp|Q8LGN0|GLR27_ARATH	Glutamate receptor 2.7 OS=Arabidopsis thaliana GN=GLR2.7 PE=2 SV=3	AT2G29120.1	| Symbols: ATGLR2.7, GLR2.7 | glutamate receptor 2.7 | chr2:12511479-12515893 REVERSE LENGTH=952	LOC_Os06g06130.1	protein|glutamate receptor, putative, expressed	IMGA|Medtr5g059920.1	Glutamate receptor 2.7 chr5 24157418-24161618 H EGN_Mt100125 20111014	GO:0006810|transport GO:0006874|cellular calcium ion homeostasis GO:0009416|response to light stimulus GO:0009627|systemic acquired resistance GO:0034976|response to endoplasmic reticulum stress	GO:0004970|ionotropic glutamate receptor activity GO:0005215|transporter activity GO:0005217|intracellular ligand-gated ion channel activity GO:0005234|extracellular-glutamate-gated ion channel activity	GO:0005634|nucleus GO:0005773|vacuole GO:0016020|membrane
pt2_03954	A	A4S	Potri.001G374800	Potri.001G374800(AS) Potri.001G374700(DS) Potri.001G374600(DS) Potri.001G375100(DS)	POPTR_0001s38380	sp|Q8LGN0|GLR27_ARATH	Glutamate receptor 2.7 OS=Arabidopsis thaliana GN=GLR2.7 PE=2 SV=3	AT2G29120.1	| Symbols: ATGLR2.7, GLR2.7 | glutamate receptor 2.7 | chr2:12511479-12515893 REVERSE LENGTH=952	LOC_Os06g06130.1	protein|glutamate receptor, putative, expressed	IMGA|Medtr5g059920.1	Glutamate receptor 2.7 chr5 24157418-24161618 H EGN_Mt100125 20111014	GO:0006810|transport GO:0006874|cellular calcium ion homeostasis GO:0009416|response to light stimulus GO:0009627|systemic acquired resistance GO:0034976|response to endoplasmic reticulum stress	GO:0004970|ionotropic glutamate receptor activity GO:0005215|transporter activity GO:0005217|intracellular ligand-gated ion channel activity GO:0005234|extracellular-glutamate-gated ion channel activity	GO:0005634|nucleus GO:0005773|vacuole GO:0016020|membrane
pt2_03955	G	G2	NA	NA	POPTR_0001s38390	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03956	A	A2S	Potri.001G375000	Potri.001G375000(AS) Potri.001G375100(AS)	POPTR_0001s38400	sp|Q8LGN0|GLR27_ARATH	Glutamate receptor 2.7 OS=Arabidopsis thaliana GN=GLR2.7 PE=2 SV=3	AT2G29120.1	| Symbols: ATGLR2.7, GLR2.7 | glutamate receptor 2.7 | chr2:12511479-12515893 REVERSE LENGTH=952	LOC_Os06g06130.1	protein|glutamate receptor, putative, expressed	IMGA|Medtr5g059920.1	Glutamate receptor 2.7 chr5 24157418-24161618 H EGN_Mt100125 20111014	GO:0006810|transport GO:0006874|cellular calcium ion homeostasis GO:0009416|response to light stimulus GO:0009627|systemic acquired resistance GO:0034976|response to endoplasmic reticulum stress	GO:0004970|ionotropic glutamate receptor activity GO:0005215|transporter activity GO:0005217|intracellular ligand-gated ion channel activity GO:0005234|extracellular-glutamate-gated ion channel activity	GO:0005634|nucleus GO:0005773|vacuole GO:0016020|membrane
pt2_03957	A	A1S	Potri.001G375200	Potri.001G375200(AS)	POPTR_0001s38410	sp|Q8LGN0|GLR27_ARATH	Glutamate receptor 2.7 OS=Arabidopsis thaliana GN=GLR2.7 PE=2 SV=3	AT2G29120.1	| Symbols: ATGLR2.7, GLR2.7 | glutamate receptor 2.7 | chr2:12511479-12515893 REVERSE LENGTH=952	LOC_Os06g06130.1	protein|glutamate receptor, putative, expressed	IMGA|Medtr5g059920.1	Glutamate receptor 2.7 chr5 24157418-24161618 H EGN_Mt100125 20111014	GO:0006810|transport GO:0006874|cellular calcium ion homeostasis GO:0009416|response to light stimulus GO:0009627|systemic acquired resistance GO:0034976|response to endoplasmic reticulum stress	GO:0004970|ionotropic glutamate receptor activity GO:0005215|transporter activity GO:0005217|intracellular ligand-gated ion channel activity GO:0005234|extracellular-glutamate-gated ion channel activity	GO:0005634|nucleus GO:0005773|vacuole GO:0016020|membrane
pt2_03958	B	B2S	Potri.001G375300	Potri.001G375300(BS) Potri.001G375400(DS)	POPTR_0001s38420	NA	NA	AT1G53210.1	| Symbols: | sodium/calcium exchanger family protein / calcium-binding EF hand family protein | chr1:19844790-19847533 FORWARD LENGTH=585	LOC_Os02g14980.1	protein|calcium-binding EF hand family protein, putative, expressed	NA	NA	GO:0007030|Golgi organization GO:0007033|vacuole organization GO:0042744|hydrogen peroxide catabolic process GO:0055085|transmembrane transport	GO:0005509|calcium ion binding	GO:0000325|plant-type vacuole GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0009506|plasmodesma GO:0009507|chloroplast GO:0016020|membrane GO:0016021|integral to membrane
pt2_03959	A	A1S	Potri.001G375400	Potri.001G375400(AS)	POPTR_0001s38430	NA	NA	AT1G53210.1	| Symbols: | sodium/calcium exchanger family protein / calcium-binding EF hand family protein | chr1:19844790-19847533 FORWARD LENGTH=585	LOC_Os02g14980.2	protein|calcium-binding EF hand family protein, putative, expressed	NA	NA	GO:0007030|Golgi organization GO:0007033|vacuole organization GO:0042744|hydrogen peroxide catabolic process GO:0055085|transmembrane transport	GO:0005509|calcium ion binding	GO:0000325|plant-type vacuole GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0009506|plasmodesma GO:0009507|chloroplast GO:0016020|membrane GO:0016021|integral to membrane
pt2_03960	A	A1S	Potri.001G375500	Potri.001G375500(AS)	POPTR_0001s38450	NA	NA	AT1G53210.1	| Symbols: | sodium/calcium exchanger family protein / calcium-binding EF hand family protein | chr1:19844790-19847533 FORWARD LENGTH=585	LOC_Os02g14980.1	protein|calcium-binding EF hand family protein, putative, expressed	NA	NA	GO:0007030|Golgi organization GO:0007033|vacuole organization GO:0042744|hydrogen peroxide catabolic process GO:0055085|transmembrane transport	GO:0005509|calcium ion binding	GO:0000325|plant-type vacuole GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0009506|plasmodesma GO:0009507|chloroplast GO:0016020|membrane GO:0016021|integral to membrane
pt2_03961	A	A1S	Potri.001G375600	Potri.001G375600(AS)	POPTR_0001s38460	NA	NA	NA	NA	NA	NA	NA	NA	GO:0009554|megasporogenesis GO:0009556|microsporogenesis GO:0048533|sporocyte differentiation GO:0048653|anther development	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_03962	A	A1S	Potri.001G375700	Potri.001G375700(AS)	POPTR_0001s38470	sp|Q9SF32|IQD1_ARATH	Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana GN=IQD1 PE=1 SV=1	AT3G15050.1	| Symbols: IQD10 | IQ-domain 10 | chr3:5066879-5067892 REVERSE LENGTH=259	LOC_Os06g06160.2	protein|IQ calmodulin-binding motif domain containing protein, expressed	IMGA|Medtr1g095740.1	IQ domain-containing protein chr1 27488331-27490594 H EGN_Mt100125 20111014	GO:0008150|biological_process GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process	GO:0005516|calmodulin binding	GO:0005634|nucleus
pt2_03963	A	A1S	Potri.001G375700	Potri.001G375700(AS)	POPTR_0001s38470	sp|Q9SF32|IQD1_ARATH	Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana GN=IQD1 PE=1 SV=1	AT3G15050.1	| Symbols: IQD10 | IQ-domain 10 | chr3:5066879-5067892 REVERSE LENGTH=259	LOC_Os06g06160.2	protein|IQ calmodulin-binding motif domain containing protein, expressed	IMGA|Medtr1g095740.1	IQ domain-containing protein chr1 27488331-27490594 H EGN_Mt100125 20111014	GO:0008150|biological_process GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process	GO:0005516|calmodulin binding	GO:0005634|nucleus
pt2_03964	A	A1S	Potri.001G375700	Potri.001G375700(AS)	POPTR_0001s38470	sp|Q9SF32|IQD1_ARATH	Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana GN=IQD1 PE=1 SV=1	AT3G15050.1	| Symbols: IQD10 | IQ-domain 10 | chr3:5066879-5067892 REVERSE LENGTH=259	LOC_Os06g06160.2	protein|IQ calmodulin-binding motif domain containing protein, expressed	IMGA|Medtr1g095740.1	IQ domain-containing protein chr1 27488331-27490594 H EGN_Mt100125 20111014	GO:0008150|biological_process GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process	GO:0005516|calmodulin binding	GO:0005634|nucleus
pt2_03965	A	A1S	Potri.001G375800	Potri.001G375800(AS)	POPTR_0001s38480	sp|Q9MAH8|TCP3_ARATH	Transcription factor TCP3 OS=Arabidopsis thaliana GN=TCP3 PE=2 SV=1	AT1G53230.1	| Symbols: TCP3 | TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 | chr1:19850260-19851435 REVERSE LENGTH=391	LOC_Os01g11550.1	protein|TCP family transcription factor, putative, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0006417|regulation of translation GO:0009657|plastid organization GO:0009793|embryo development ending in seed dormancy GO:0009965|leaf morphogenesis GO:0010027|thylakoid membrane organization GO:0010228|vegetative to reproductive phase transition of meristem GO:0016226|iron-sulfur cluster assembly GO:0030154|cell differentiation GO:0045893|positive regulation of transcription, DNA-dependent GO:0045962|positive regulation of development, heterochronic GO:0048366|leaf development GO:0048481|ovule development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03966	A	A1S	Potri.001G375900	Potri.001G375900(AS)	POPTR_0001s38490	sp|P51281|YCF45_PORPU	Uncharacterized protein ycf45 OS=Porphyra purpurea GN=ycf45 PE=3 SV=1	AT1G73170.1	| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:27511722-27514783 REVERSE LENGTH=666	LOC_Os06g06190.1	protein|uncharacterized protein ycf45, putative, expressed	NA	NA	GO:0006508|proteolysis GO:0016036|cellular response to phosphate starvation GO:0019375|galactolipid biosynthetic process	GO:0000166|nucleotide binding GO:0004176|ATP-dependent peptidase activity GO:0004252|serine-type endopeptidase activity GO:0005524|ATP binding GO:0017111|nucleoside-triphosphatase activity	GO:0009507|chloroplast
pt2_03967	A	A1S	Potri.001G375900	Potri.001G375900(AS)	POPTR_0001s38500	sp|P51281|YCF45_PORPU	Uncharacterized protein ycf45 OS=Porphyra purpurea GN=ycf45 PE=3 SV=1	AT1G73170.1	| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:27511722-27514783 REVERSE LENGTH=666	LOC_Os06g06190.1	protein|uncharacterized protein ycf45, putative, expressed	NA	NA	GO:0006508|proteolysis GO:0016036|cellular response to phosphate starvation GO:0019375|galactolipid biosynthetic process	GO:0000166|nucleotide binding GO:0004176|ATP-dependent peptidase activity GO:0004252|serine-type endopeptidase activity GO:0005524|ATP binding GO:0017111|nucleoside-triphosphatase activity	GO:0009507|chloroplast
pt2_03968	A	A1S	Potri.001G376000	Potri.001G376000(AS)	POPTR_0001s38505	NA	NA	NA	NA	NA	NA	IMGA|Medtr1g041550.1	Cc-nbs resistance protein chr1 11650158-11644067 E EGN_Mt100125 20111014	NA	NA	NA
pt2_03969	C	C1A	Potri.001G376100	Potri.001G376100(CA)	NA	NA	NA	NA	NA	NA	NA	NA	GO:0007165|signal transduction	GO:0005102|receptor binding GO:0033612|receptor serine/threonine kinase binding	GO:0048046|apoplast
pt2_03970	A	A1S	Potri.001G376200	Potri.001G376200(AS)	POPTR_0001s38530	NA	NA	NA	NA	NA	NA	NA	NA	GO:0007165|signal transduction	GO:0005102|receptor binding	GO:0005576|extracellular region GO:0048046|apoplast
pt2_03971	A	A1S	Potri.001G376300	Potri.001G376300(AS)	POPTR_0001s38540	NA	NA	AT1G73160.1	| Symbols: | UDP-Glycosyltransferase superfamily protein | chr1:27506534-27507994 FORWARD LENGTH=486	LOC_Os01g46430.1	protein|glycosyl transferase, group 1 domain containing protein, expressed	IMGA|Medtr5g026360.1	Capsular polysaccharide biosynthesis glycosyltransferase capM chr5 10585028-10583568 H EGN_Mt100125 20111014	GO:0001666|response to hypoxia GO:0009058|biosynthetic process GO:0019375|galactolipid biosynthetic process	GO:0016757|transferase activity, transferring glycosyl groups	NA
pt2_03972	A	A2S	Potri.001G376400	Potri.001G376400(AS) Potri.011G096400(DS)	POPTR_0001s38550	sp|Q9LNC4|GTE4_ARATH	Transcription factor GTE4 OS=Arabidopsis thaliana GN=GTE4 PE=2 SV=1	AT1G06230.3	| Symbols: GTE4 | global transcription factor group E4 | chr1:1907626-1910183 FORWARD LENGTH=766	LOC_Os01g11580.1	protein|bromodomain containing protein, expressed	IMGA|contig_166847_1.1	Bromodomain protein-like protein contig_166847 889-2214 H PREDN 20111014	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0048364|root development	GO:0003677|DNA binding	GO:0005575|cellular_component
pt2_03973	A	A1S	Potri.001G376500	Potri.001G376500(AS)	POPTR_0001s38560	sp|P46487|MDHM_EUCGU	Malate dehydrogenase, mitochondrial OS=Eucalyptus gunnii GN=MDH PE=2 SV=1	AT3G15020.1	| Symbols: mMDH2 | Lactate/malate dehydrogenase family protein | chr3:5056139-5057941 FORWARD LENGTH=341	LOC_Os01g46070.1	protein|lactate/malate dehydrogenase, putative, expressed	IMGA|Medtr5g014710.1	"Malate dehydrogenase, glyoxysomal" chr5 4735187-4730913 F EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0006094|gluconeogenesis GO:0006096|glycolysis GO:0006108|malate metabolic process GO:0006833|water transport GO:0006972|hyperosmotic response GO:0007030|Golgi organization GO:0009266|response to temperature stimulus GO:0009409|response to cold GO:0009651|response to salt stress GO:0018119|peptidyl-cysteine S-nitrosylation GO:0042742|defense response to bacterium GO:0044262|cellular carbohydrate metabolic process GO:0046686|response to cadmium ion GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0005507|copper ion binding GO:0016491|oxidoreductase activity GO:0016615|malate dehydrogenase activity GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0030060|L-malate dehydrogenase activity	GO:0005618|cell wall GO:0005739|mitochondrion GO:0009507|chloroplast GO:0048046|apoplast
pt2_03974	A	A1S	Potri.001G376600	Potri.001G376600(AS)	POPTR_0001s38570	sp|Q9C5J6|IPT9_ARATH	tRNA dimethylallyltransferase 9 OS=Arabidopsis thaliana GN=IPT9 PE=2 SV=1	AT5G20040.1	| Symbols: ATIPT9, IPT9 | isopentenyltransferase 9 | chr5:6767939-6770980 REVERSE LENGTH=463	LOC_Os06g51350.1	protein|IPP transferase, putative, expressed	IMGA|contig_78898_1.1	tRNA dimethylallyltransferase contig_78898 222-1157 H PREDN 20111014	GO:0006164|purine nucleotide biosynthetic process GO:0008033|tRNA processing GO:0009691|cytokinin biosynthetic process	GO:0005524|ATP binding GO:0016301|kinase activity GO:0052381|tRNA dimethylallyltransferase activity	GO:0005634|nucleus
pt2_03975	A	A1S	Potri.001G376700	Potri.001G376700(AS)	POPTR_0001s38580	NA	NA	AT1G73140.1	| Symbols: TBL31 | Plant protein of unknown function (DUF828) | chr1:27502133-27503743 REVERSE LENGTH=413	LOC_Os03g60350.1	protein|leaf senescence related protein, putative, expressed	IMGA|Medtr5g083260.1	CCP chr5 34921861-34931196 E EGN_Mt100125 20111014	NA	NA	NA
pt2_03976	A	A2S	Potri.001G376800	Potri.001G376800(AS) Potri.001G376700(AA)	POPTR_0001s38590	NA	NA	AT1G17780.2	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G16575.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr1:6124095-6125166 FORWARD LENGTH=263	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_03977	A	A1S	Potri.001G376900	Potri.001G376900(AS)	POPTR_0001s38600	NA	NA	AT1G53460.1	| Symbols: | BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT1G70650.2); Has 485 Blast hits to 413 proteins in 88 species: Archae - 11; Bacteria - 27; Metazoa - 119; Fungi - 17; Plants - 101; Viruses - 2; Other Eukaryotes - 208 (source: NCBI BLink). | chr1:19954558-19956509 REVERSE LENGTH=314	LOC_Os01g10630.2	protein|expressed protein	NA	NA	NA	NA	GO:0009507|chloroplast
pt2_03978	A	A2S	Potri.001G377000	Potri.001G377000(AS) Potri.012G071500(DS)	POPTR_0001s38610	sp|Q944G5|PTR44_ARATH	Probable peptide/nitrate transporter At3g47960 OS=Arabidopsis thaliana GN=At3g47960 PE=1 SV=3	AT3G47960.1	| Symbols: | Major facilitator superfamily protein | chr3:17698126-17700771 REVERSE LENGTH=636	LOC_Os03g48180.1	protein|peptide transporter PTR2, putative, expressed	NA	NA	GO:0006857|oligopeptide transport GO:0090449|phloem glucosinolate loading GO:1901349|glucosinolate transport	GO:0005215|transporter activity GO:0090448|glucosinolate:hydrogen symporter activity	GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane
pt2_03979	A	A1S	Potri.001G377100	Potri.001G377100(AS)	POPTR_0001s38620	NA	NA	AT1G12790.1	| Symbols: | CONTAINS InterPro DOMAIN/s: RuvA domain 2-like (InterPro:IPR010994); Has 29 Blast hits to 29 proteins in 9 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:4359597-4361222 REVERSE LENGTH=250	LOC_Os05g51060.1	protein|DNA ligase, putative, expressed	NA	NA	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_03980	A	A1S	Potri.001G377200	Potri.001G377200(AS)	POPTR_0001s38630	sp|P46279|RPB7_SOYBN	DNA-directed RNA polymerase II subunit RPB7 OS=Glycine max PE=2 SV=1	AT5G59180.1	| Symbols: NRPB7 | DNA-directed RNA polymerase II | chr5:23883499-23884976 FORWARD LENGTH=176	LOC_Os05g33240.1	protein|DNA-directed RNA polymerase II subunit RPB7, putative, expressed	IMGA|Medtr1g075140.1	DNA-directed RNA polymerase II subunit RPB7 chr1 18959162-18950214 E EGN_Mt100125 20111014	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0006351|transcription, DNA-dependent GO:0006366|transcription from RNA polymerase II promoter	GO:0003723|RNA binding GO:0003899|DNA-directed RNA polymerase activity	GO:0005634|nucleus GO:0005665|DNA-directed RNA polymerase II, core complex
pt2_03981	A	A1S	Potri.001G377400	Potri.001G377400(AS)	POPTR_0001s38640	sp|Q32P51|RA1L2_HUMAN	Heterogeneous nuclear ribonucleoprotein A1-like 2 OS=Homo sapiens GN=HNRNPA1L2 PE=2 SV=2	AT3G15010.2	| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr3:5052844-5054058 FORWARD LENGTH=404	LOC_Os01g42820.1	protein|RNA recognition motif containing protein, putative, expressed	IMGA|Medtr5g088220.1	Heterogeneous nuclear ribonucleoprotein D0 chr5 37214495-37212096 F EGN_Mt100125 20111014	GO:0006952|defense response GO:0008219|cell death GO:0009693|ethylene biosynthetic process GO:0010150|leaf senescence	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005634|nucleus GO:0005730|nucleolus
pt2_03982	G	G1	NA	NA	POPTR_0001s38650	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_03983	C	C1S	Potri.001G377500	Potri.001G377500(CS)	NA	NA	AT3G14450.1	| Symbols: CID9 | CTC-interacting domain 9 | chr3:4849788-4851601 FORWARD LENGTH=327	LOC_Os01g11120.1	protein|CID11, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_03984	A	A2S	Potri.001G377500	Potri.001G377500(AS) Potri.011G095800(DS)	POPTR_0001s38670	NA	NA	AT3G14450.1	| Symbols: CID9 | CTC-interacting domain 9 | chr3:4849788-4851601 FORWARD LENGTH=327	LOC_Os01g11120.1	protein|CID11, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_03985	C	C1S	Potri.001G377500	Potri.001G377500(CS)	NA	NA	AT3G14450.1	| Symbols: CID9 | CTC-interacting domain 9 | chr3:4849788-4851601 FORWARD LENGTH=327	LOC_Os01g11120.1	protein|CID11, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_03986	A	A1S	Potri.001G377700	Potri.001G377700(AS)	POPTR_0001s38690	sp|Q6H9K0|PGLR2_PLAAC	Exopolygalacturonase (Fragment) OS=Platanus acerifolia GN=plaa2 PE=1 SV=1	AT1G78400.1	| Symbols: | Pectin lyase-like superfamily protein | chr1:29498281-29499682 REVERSE LENGTH=404	LOC_Os06g40880.1	protein|polygalacturonase, putative, expressed	IMGA|contig_172995_1.1	Polygalacturonase contig_172995 55-1316 H PREDN 20111014	GO:0005975|carbohydrate metabolic process GO:0042991|transcription factor import into nucleus	GO:0004650|polygalacturonase activity	GO:0005576|extracellular region
pt2_03987	A	A1S	Potri.001G377800	Potri.001G377800(AS)	POPTR_0001s38700	sp|Q54WR5|CCD94_DICDI	Coiled-coil domain-containing protein 94 homolog OS=Dictyostelium discoideum GN=ccdc94 PE=3 SV=1	AT1G17130.1	| Symbols: | Family of unknown function (DUF572) | chr1:5854264-5856472 FORWARD LENGTH=331	LOC_Os01g40610.1	protein|coiled-coil domain-containing protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_03988	A	A1S	Potri.001G377800	Potri.001G377800(AS)	POPTR_0001s38700	sp|Q54WR5|CCD94_DICDI	Coiled-coil domain-containing protein 94 homolog OS=Dictyostelium discoideum GN=ccdc94 PE=3 SV=1	AT1G17130.1	| Symbols: | Family of unknown function (DUF572) | chr1:5854264-5856472 FORWARD LENGTH=331	LOC_Os01g40610.1	protein|coiled-coil domain-containing protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_03989	A	A1S	Potri.001G377900	Potri.001G377900(AS)	POPTR_0001s38710	sp|Q9M9F9|ICR4_ARATH	Interactor of constitutive active ROPs 4 OS=Arabidopsis thaliana GN=ICR4 PE=2 SV=2	AT1G78430.1	| Symbols: RIP2 | ROP interactive partner 2 | chr1:29509605-29510679 FORWARD LENGTH=324	LOC_Os01g55280.1	protein|expressed protein	NA	NA	GO:0006346|methylation-dependent chromatin silencing GO:0008150|biological_process GO:0009855|determination of bilateral symmetry GO:0009887|organ morphogenesis GO:0010051|xylem and phloem pattern formation GO:0016246|RNA interference GO:0048439|flower morphogenesis GO:0048519|negative regulation of biological process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005576|extracellular region
pt2_03990	A	A1S	Potri.001G378000	Potri.001G378000(AS)	POPTR_0001s38730	sp|Q759M1|SIP5_ASHGO	Protein SIP5 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SIP5 PE=3 SV=1	AT1G78420.2	| Symbols: | RING/U-box superfamily protein | chr1:29505278-29507272 FORWARD LENGTH=401	LOC_Os02g14720.1	protein|expressed protein	NA	NA	GO:0006499|N-terminal protein myristoylation GO:0009644|response to high light intensity GO:0042542|response to hydrogen peroxide	GO:0008270|zinc ion binding	GO:0005737|cytoplasm
pt2_03991	A	A1S	Potri.001G378100	Potri.001G378100(AS)	POPTR_0001s38740	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006281|DNA repair GO:0009826|unidimensional cell growth GO:0009908|flower development GO:0009965|leaf morphogenesis GO:0010090|trichome morphogenesis GO:0010224|response to UV-B	GO:0046872|metal ion binding	GO:0005634|nucleus GO:0005730|nucleolus GO:0005737|cytoplasm GO:0005829|cytosol GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_03992	A	A1S	Potri.001G378300	Potri.001G378300(AS)	POPTR_0001s38750	NA	NA	AT1G17147.1	| Symbols: | VQ motif-containing protein | chr1:5863654-5863950 REVERSE LENGTH=98	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_03993	A	A1S	Potri.001G378400	Potri.001G378400(AS)	POPTR_0001s38760	sp|Q9SQ80|G2OX1_PEA	Gibberellin 2-beta-dioxygenase 1 OS=Pisum sativum GN=GA2OX1 PE=1 SV=1	AT1G78440.1	| Symbols: ATGA2OX1, GA2OX1 | Arabidopsis thaliana gibberellin 2-oxidase 1 | chr1:29511772-29512990 REVERSE LENGTH=329	LOC_Os01g55240.1	protein|gibberellin 2-beta-dioxygenase, putative, expressed	IMGA|Medtr5g055680.1	Protein SRG1 chr5 22384306-22387839 F EGN_Mt100125 20111014	GO:0045487|gibberellin catabolic process GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors GO:0052634|C-19 gibberellin 2-beta-dioxygenase activity	GO:0005737|cytoplasm
pt2_03994	A	A1S	Potri.001G378500	Potri.001G378500(AS)	POPTR_0001s38770	sp|Q9SHH0|CAAT8_ARATH	Cationic amino acid transporter 8, vacuolar OS=Arabidopsis thaliana GN=CAT8 PE=1 SV=1	AT1G17120.1	| Symbols: CAT8 | cationic amino acid transporter 8 | chr1:5851964-5853736 FORWARD LENGTH=590	LOC_Os01g11160.1	protein|amino acid permease family protein, putative, expressed	NA	NA	GO:0003333|amino acid transmembrane transport GO:0006810|transport GO:0009741|response to brassinosteroid stimulus GO:0055085|transmembrane transport	GO:0015171|amino acid transmembrane transporter activity GO:0015326|cationic amino acid transmembrane transporter activity	GO:0005774|vacuolar membrane GO:0005886|plasma membrane GO:0016020|membrane GO:0043231|intracellular membrane-bounded organelle
pt2_03995	A	A1S	Potri.001G378600	Potri.001G378600(AS)	POPTR_0001s38780	sp|Q9SHH0|CAAT8_ARATH	Cationic amino acid transporter 8, vacuolar OS=Arabidopsis thaliana GN=CAT8 PE=1 SV=1	AT1G17120.1	| Symbols: CAT8 | cationic amino acid transporter 8 | chr1:5851964-5853736 FORWARD LENGTH=590	LOC_Os06g34830.1	protein|amino acid permease family protein, putative, expressed	NA	NA	GO:0003333|amino acid transmembrane transport GO:0043091|L-arginine import GO:0051938|L-glutamate import	GO:0005313|L-glutamate transmembrane transporter activity GO:0015171|amino acid transmembrane transporter activity GO:0015181|arginine transmembrane transporter activity GO:0015189|L-lysine transmembrane transporter activity GO:0015326|cationic amino acid transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_03996	A	A1S	Potri.001G378700	Potri.001G378700(AS)	POPTR_0001s38790	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	GO:0005575|cellular_component
pt2_03997	A	A1S	Potri.001G378900	Potri.001G378900(AS)	POPTR_0001s38800	sp|Q9FPS9|UBP15_ARATH	Ubiquitin carboxyl-terminal hydrolase 15 OS=Arabidopsis thaliana GN=UBP15 PE=2 SV=2	AT1G17110.1	| Symbols: UBP15 | ubiquitin-specific protease 15 | chr1:5845816-5849889 REVERSE LENGTH=924	LOC_Os02g14730.1	protein|ubiquitin carboxyl-terminal hydrolase family protein, expressed	IMGA|Medtr5g066000.1	Ubiquitin carboxyl-terminal hydrolase chr5 26818749-26826548 E EGN_Mt100125 20111014	GO:0006511|ubiquitin-dependent protein catabolic process GO:0008283|cell proliferation GO:0009908|flower development GO:0010154|fruit development GO:0016579|protein deubiquitination GO:0048364|root development GO:0048366|leaf development GO:0048367|shoot development	GO:0004221|ubiquitin thiolesterase activity GO:0004843|ubiquitin-specific protease activity GO:0008270|zinc ion binding	GO:0005576|extracellular region GO:0005634|nucleus GO:0005737|cytoplasm
pt2_03998	A	A1S	Potri.001G379000	Potri.001G379000(AS)	POPTR_0001s38810	sp|Q9Y5Z4|HEBP2_HUMAN	Heme-binding protein 2 OS=Homo sapiens GN=HEBP2 PE=1 SV=1	AT1G17100.1	| Symbols: | SOUL heme-binding family protein | chr1:5844766-5845539 FORWARD LENGTH=232	LOC_Os01g11230.1	protein|SOUL heme-binding protein, putative, expressed	IMGA|contig_238191_1.1	Heme-binding protein contig_238191 469-227 H PREDN 20111014	GO:0008150|biological_process GO:0019761|glucosinolate biosynthetic process	NA	GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0009507|chloroplast
pt2_03999	A	A1S	Potri.001G379100	Potri.001G379100(AS)	POPTR_0001s38820	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04000	A	A1S	Potri.001G379300	Potri.001G379300(AS)	POPTR_0001s38830	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04001	C	C1S	Potri.001G379400	Potri.001G379400(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04002	A	A1S	Potri.001G379500	Potri.001G379500(AS)	POPTR_0001s38850	sp|Q9LUD6|PP230_ARATH	Pentatricopeptide repeat-containing protein At3g14580, mitochondrial OS=Arabidopsis thaliana GN=At3g14580 PE=2 SV=1	AT3G14580.1	| Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr3:4903012-4904229 FORWARD LENGTH=405	LOC_Os04g52725.1	protein|PPR repeat domain containing protein, putative, expressed	IMGA|contig_69765_1.1	Pentatricopeptide repeat-containing protein contig_69765 768-2158 H PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_04003	A	A2S	Potri.001G379600	Potri.001G379600(AS) Potri.001G379700(AA)	POPTR_0001s38860	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04004	C	C1S	Potri.001G379700	Potri.001G379700(CS)	sp|Q9LRR4|R13L1_ARATH	Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana GN=RPPL1 PE=2 SV=1	AT3G14470.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr3:4857940-4861104 FORWARD LENGTH=1054	LOC_Os05g41290.1	protein|disease resistance RPP13-like protein 1, putative, expressed	IMGA|Medtr5g095910.1	NB-LRR type disease resistance protein Rps1-k-2 chr5 40893619-40897389 H EGN_Mt100125 20111014	GO:0006952|defense response GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process	GO:0005515|protein binding GO:0043531|ADP binding	GO:0005576|extracellular region
pt2_04005	G	G1	NA	NA	POPTR_0001s38880	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04006	G	G1	NA	NA	POPTR_0001s38890	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04007	A	A1S	Potri.001G380000	Potri.001G380000(AS)	POPTR_0001s38900	sp|P22242|DRPE_CRAPL	Desiccation-related protein PCC13-62 OS=Craterostigma plantagineum PE=2 SV=1	AT3G62730.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, LP.02 two leaves visible, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G47980.1); Has 172 Blast hits to 172 proteins in 41 species: Archae - 0; Bacteria - 73; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:23208003-23209436 REVERSE LENGTH=317	LOC_Os03g22470.1	protein|desiccation-related protein PCC13-62 precursor, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_04008	G	G1	NA	NA	POPTR_0001s38905	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04009	A	A1S	Potri.001G380100	Potri.001G380100(AS)	POPTR_0001s38910	sp|Q9C8L4|GLO2O_ARATH	Hydroxyacylglutathione hydrolase 3, mitochondrial OS=Arabidopsis thaliana GN=GLY3 PE=1 SV=3	AT1G53580.1	| Symbols: GLX2-3, ETHE1, GLY3 | glyoxalase II 3 | chr1:19991542-19993250 REVERSE LENGTH=294	LOC_Os01g47690.1	protein|metallo-beta-lactamase family protein, putative, expressed	IMGA|Medtr5g068440.1	Hydroxyacylglutathione hydrolase chr5 27982119-27986713 F EGN_Mt100125 20111014	GO:0009651|response to salt stress GO:0009793|embryo development ending in seed dormancy GO:0009960|endosperm development GO:0019243|methylglyoxal catabolic process to D-lactate GO:0048316|seed development GO:0055114|oxidation-reduction process	GO:0004416|hydroxyacylglutathione hydrolase activity GO:0016788|hydrolase activity, acting on ester bonds GO:0050313|sulfur dioxygenase activity	GO:0005739|mitochondrion
pt2_04010	A	A1S	Potri.001G380100	Potri.001G380100(AS)	POPTR_0001s38910	sp|Q9C8L4|GLO2O_ARATH	Hydroxyacylglutathione hydrolase 3, mitochondrial OS=Arabidopsis thaliana GN=GLY3 PE=1 SV=3	AT1G53580.1	| Symbols: GLX2-3, ETHE1, GLY3 | glyoxalase II 3 | chr1:19991542-19993250 REVERSE LENGTH=294	LOC_Os01g47690.1	protein|metallo-beta-lactamase family protein, putative, expressed	IMGA|Medtr5g068440.1	Hydroxyacylglutathione hydrolase chr5 27982119-27986713 F EGN_Mt100125 20111014	GO:0009651|response to salt stress GO:0009793|embryo development ending in seed dormancy GO:0009960|endosperm development GO:0019243|methylglyoxal catabolic process to D-lactate GO:0048316|seed development GO:0055114|oxidation-reduction process	GO:0004416|hydroxyacylglutathione hydrolase activity GO:0016788|hydrolase activity, acting on ester bonds GO:0050313|sulfur dioxygenase activity	GO:0005739|mitochondrion
pt2_04011	A	A1S	Potri.001G380100	Potri.001G380100(AS)	POPTR_0001s38910	sp|Q9C8L4|GLO2O_ARATH	Hydroxyacylglutathione hydrolase 3, mitochondrial OS=Arabidopsis thaliana GN=GLY3 PE=1 SV=3	AT1G53580.1	| Symbols: GLX2-3, ETHE1, GLY3 | glyoxalase II 3 | chr1:19991542-19993250 REVERSE LENGTH=294	LOC_Os01g47690.1	protein|metallo-beta-lactamase family protein, putative, expressed	IMGA|Medtr5g068440.1	Hydroxyacylglutathione hydrolase chr5 27982119-27986713 F EGN_Mt100125 20111014	GO:0009651|response to salt stress GO:0009793|embryo development ending in seed dormancy GO:0009960|endosperm development GO:0019243|methylglyoxal catabolic process to D-lactate GO:0048316|seed development GO:0055114|oxidation-reduction process	GO:0004416|hydroxyacylglutathione hydrolase activity GO:0016788|hydrolase activity, acting on ester bonds GO:0050313|sulfur dioxygenase activity	GO:0005739|mitochondrion
pt2_04012	A	A1S	Potri.001G380200	Potri.001G380200(AS)	POPTR_0001s38920	sp|Q8L9S1|R18A1_ARATH	60S ribosomal protein L18a-1 OS=Arabidopsis thaliana GN=RPL18AA PE=2 SV=2	AT1G17080.1	| Symbols: | Ribosomal protein L18ae family | chr1:5840458-5841536 REVERSE LENGTH=154	LOC_Os05g49020.1	protein|60S ribosomal protein L18a-1, putative, expressed	NA	NA	GO:0006412|translation GO:0006623|protein targeting to vacuole GO:0008150|biological_process GO:0016192|vesicle-mediated transport	GO:0003735|structural constituent of ribosome GO:0005515|protein binding	NA
pt2_04013	A	A1S	Potri.001G380300	Potri.001G380300(AS)	POPTR_0001s38930	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04014	A	A1S	Potri.001G380400	Potri.001G380400(AS)	POPTR_0001s38940	sp|Q9CQU8|IMP1L_MOUSE	Mitochondrial inner membrane protease subunit 1 OS=Mus musculus GN=Immp1l PE=2 SV=1	AT1G53530.1	| Symbols: | Peptidase S24/S26A/S26B/S26C family protein | chr1:19978249-19979778 FORWARD LENGTH=168	LOC_Os11g40500.1	protein|OsSigP7 - Putative Type I Signal Peptidase homologue; employs a putative Ser/Lys catalytic dyad, expressed	IMGA|Medtr5g007850.1	Mitochondrial inner membrane protease subunit chr5 1313395-1315825 F EGN_Mt100125 20111014	GO:0006508|proteolysis	GO:0008233|peptidase activity GO:0008236|serine-type peptidase activity	GO:0005739|mitochondrion GO:0005886|plasma membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_04015	A	A1S	Potri.001G380500	Potri.001G380500(AS)	POPTR_0001s38950	sp|Q8S948|SPS1_ARATH	Solanesyl diphosphate synthase 1 OS=Arabidopsis thaliana GN=SPS1 PE=1 SV=1	AT1G78510.1	| Symbols: SPS1 | solanesyl diphosphate synthase 1 | chr1:29535410-29537163 REVERSE LENGTH=406	LOC_Os05g50550.1	protein|polyprenyl synthetase, putative, expressed	IMGA|Medtr5g019460.1	Geranylgeranyl pyrophosphate synthase chr5 7084675-7083534 E EGN_Mt100125 20111014	GO:0006744|ubiquinone biosynthetic process GO:0008299|isoprenoid biosynthetic process GO:0015979|photosynthesis	GO:0050347|trans-octaprenyltranstransferase activity	GO:0005739|mitochondrion GO:0005783|endoplasmic reticulum
pt2_04016	A	A1S	Potri.001G380600	Potri.001G380600(AS)	POPTR_0001s38960	sp|P52409|E13B_WHEAT	Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1	AT1G78520.1	| Symbols: | Carbohydrate-binding X8 domain superfamily protein | chr1:29537976-29538656 REVERSE LENGTH=115	LOC_Os01g14140.1	protein|X8 domain containing protein, expressed	IMGA|Medtr5g078200.1	"Glucan endo-1,3-beta-glucosidase" chr5 32414043-32418084 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005886|plasma membrane
pt2_04017	A	A1S	Potri.001G380700	Potri.001G380700(AS)	POPTR_0001s38970	NA	NA	AT1G53520.1	| Symbols: | Chalcone-flavanone isomerase family protein | chr1:19976485-19977915 REVERSE LENGTH=287	LOC_Os02g21520.1	protein|chalcone isomerase 3, putative, expressed	NA	NA	GO:0006631|fatty acid metabolic process	GO:0005504|fatty acid binding	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_04018	A	A1S	Potri.001G380800	Potri.001G380800(AS)	POPTR_0001s38980	sp|Q9SYM9|Y1853_ARATH	Receptor-like serine/threonine-protein kinase At1g78530 OS=Arabidopsis thaliana GN=At1g78530 PE=2 SV=1	AT1G78530.1	| Symbols: | Protein kinase superfamily protein | chr1:29539274-29540681 REVERSE LENGTH=355	LOC_Os01g14510.1	protein|BRASSINOSTEROID INSENSITIVE 1 precursor, putative, expressed	IMGA|Medtr5g026510.1	LRR receptor-like serine/threonine-protein kinase FEI chr5 10652878-10642878 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_04019	A	A1S	Potri.001G380800	Potri.001G380800(AS)	POPTR_0001s38980	sp|Q9SYM9|Y1853_ARATH	Receptor-like serine/threonine-protein kinase At1g78530 OS=Arabidopsis thaliana GN=At1g78530 PE=2 SV=1	AT1G78530.1	| Symbols: | Protein kinase superfamily protein | chr1:29539274-29540681 REVERSE LENGTH=355	LOC_Os01g14510.1	protein|BRASSINOSTEROID INSENSITIVE 1 precursor, putative, expressed	IMGA|Medtr5g026510.1	LRR receptor-like serine/threonine-protein kinase FEI chr5 10652878-10642878 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_04020	B	B3S	Potri.001G380800	Potri.001G380800(BS) Potri.T179000(DA) Potri.011G101800(DA)	POPTR_0001s38980	sp|Q9SYM9|Y1853_ARATH	Receptor-like serine/threonine-protein kinase At1g78530 OS=Arabidopsis thaliana GN=At1g78530 PE=2 SV=1	AT1G78530.1	| Symbols: | Protein kinase superfamily protein | chr1:29539274-29540681 REVERSE LENGTH=355	LOC_Os01g14510.1	protein|BRASSINOSTEROID INSENSITIVE 1 precursor, putative, expressed	IMGA|Medtr5g026510.1	LRR receptor-like serine/threonine-protein kinase FEI chr5 10652878-10642878 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_04021	A	A2S	Potri.001G380900	Potri.001G380900(AS) Potri.011G102100(BS)	POPTR_0001s38990	NA	NA	AT1G78540.1	| Symbols: SHB, ATSHB, STATLB | SH2 domain protein B | chr1:29541244-29544574 REVERSE LENGTH=668	LOC_Os10g41770.1	protein|expressed protein	IMGA|contig_103578_2.1	Unknown protein contig_103578 4250-772 E PREDN 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0007165|signal transduction	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0004871|signal transducer activity	GO:0005634|nucleus
pt2_04022	C	C1S	Potri.001G381000	Potri.001G381000(CS)	sp|Q9LVQ8|P2C80_ARATH	Probable protein phosphatase 2C 80 OS=Arabidopsis thaliana GN=At5g66720 PE=2 SV=1	AT5G66720.1	| Symbols: | Protein phosphatase 2C family protein | chr5:26639015-26640545 REVERSE LENGTH=414	LOC_Os03g59470.1	protein|stage II sporulation protein E, putative, expressed	IMGA|Medtr5g019790.1	Mitochondrial catalytic protein chr5 7246834-7244365 F EGN_Mt100125 20111014	NA	GO:0003824|catalytic activity	GO:0005739|mitochondrion
pt2_04023	A	A1S	Potri.001G381200	Potri.001G381200(AS)	POPTR_0001s39010	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04024	A	A1S	Potri.001G381300	Potri.001G381300(AS)	POPTR_0001s39020	sp|Q9LUC3|MPK19_ARATH	Mitogen-activated protein kinase 19 OS=Arabidopsis thaliana GN=MPK19 PE=2 SV=2	AT3G14720.1	| Symbols: ATMPK19, MPK19 | MAP kinase 19 | chr3:4946057-4948906 FORWARD LENGTH=598	LOC_Os01g43910.1	protein|CGMC_MAPKCMGC_2.4 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	IMGA|Medtr5g091680.1	Mitogen activated protein kinase 20-1 chr5 38953398-38958773 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0007165|signal transduction	GO:0004672|protein kinase activity GO:0004707|MAP kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus
pt2_04025	C	C1S	Potri.001G381400	Potri.001G381400(CS)	NA	NA	AT1G17030.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G47010.2); Has 70 Blast hits to 70 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | chr1:5822487-5824424 FORWARD LENGTH=502	LOC_Os05g19030.2	protein|expressed protein	IMGA|Medtr1g086170.1	hypothetical protein chr1 22925539-22927989 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_04026	A	A1S	Potri.001G381500	Potri.001G381500(AS)	POPTR_0001s39040	sp|Q8L8W0|ALIS5_ARATH	ALA-interacting subunit 5 OS=Arabidopsis thaliana GN=ALIS5 PE=1 SV=1	AT1G79450.1	| Symbols: ALIS5 | ALA-interacting subunit 5 | chr1:29887831-29889904 FORWARD LENGTH=350	LOC_Os03g02830.1	protein|cell cycle control protein, putative, expressed	NA	NA	GO:0006865|amino acid transport GO:0008150|biological_process	NA	GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0009543|chloroplast thylakoid lumen GO:0016020|membrane
pt2_04027	A	A1S	Potri.001G381600	Potri.001G381600(AS)	POPTR_0001s39050	NA	NA	AT1G17030.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G47010.2); Has 70 Blast hits to 70 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | chr1:5822487-5824424 FORWARD LENGTH=502	LOC_Os05g19000.1	protein|expressed protein	IMGA|Medtr1g086170.1	hypothetical protein chr1 22925539-22927989 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_04028	A	A1S	Potri.001G381700	Potri.001G381700(AS)	POPTR_0001s39060	sp|Q39224|SRG1_ARATH	Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1	AT1G17020.1	| Symbols: SRG1, ATSRG1 | senescence-related gene 1 | chr1:5820258-5821741 FORWARD LENGTH=358	LOC_Os01g24980.1	protein|naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed	IMGA|Medtr5g055900.1	SRG1-like protein chr5 22481430-22479560 H EGN_Mt100125 20111014	GO:0009737|response to abscisic acid stimulus GO:0009793|embryo development ending in seed dormancy GO:0009813|flavonoid biosynthetic process GO:0009830|cell wall modification involved in abscission GO:0009845|seed germination GO:0010162|seed dormancy process GO:0010260|organ senescence GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity GO:0016682|oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_04029	A	A1S	Potri.001G192900	Potri.001G192900(AS)	POPTR_0001s39065	NA	NA	AT3G17450.1	| Symbols: | hAT dimerisation domain-containing protein | chr3:5972793-5975684 REVERSE LENGTH=877	LOC_Os09g32380.1	protein|transposon protein, putative, unclassified, expressed	IMGA|Medtr5g012510.1	hypothetical protein chr5 3512350-3509693 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003677|DNA binding GO:0046983|protein dimerization activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04030	A	A2S	Potri.001G381900	Potri.001G381900(AS) Potri.001G382200(BS)	POPTR_0001s39070	sp|Q8H038|KATAM_ORYSJ	Xyloglucan galactosyltransferase KATAMARI1 homolog OS=Oryza sativa subsp. japonica GN=Os03g0144800 PE=2 SV=1	AT1G68470.1	| Symbols: | Exostosin family protein | chr1:25676545-25678267 REVERSE LENGTH=455	LOC_Os03g05110.1	protein|xyloglucan galactosyltransferase KATAMARI1, putative, expressed	IMGA|Medtr5g055350.1	Xyloglucan galactosyltransferase KATAMARI1 chr5 22252119-22253462 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003824|catalytic activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_04031	G	G1	NA	NA	POPTR_0001s39080	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04032	C	C1S	Potri.001G382100	Potri.001G382100(CS)	sp|Q39224|SRG1_ARATH	Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1	AT4G25310.1	| Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr4:12949753-12951138 FORWARD LENGTH=353	LOC_Os01g24980.2	protein|naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed	IMGA|Medtr5g055680.1	Protein SRG1 chr5 22384306-22387839 F EGN_Mt100125 20111014	GO:0009813|flavonoid biosynthetic process GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_04033	A	A2S	Potri.001G382200	Potri.001G382200(AS) Potri.001G381900(BS)	POPTR_0001s39100	sp|Q8H038|KATAM_ORYSJ	Xyloglucan galactosyltransferase KATAMARI1 homolog OS=Oryza sativa subsp. japonica GN=Os03g0144800 PE=2 SV=1	AT1G68470.1	| Symbols: | Exostosin family protein | chr1:25676545-25678267 REVERSE LENGTH=455	LOC_Os03g05110.1	protein|xyloglucan galactosyltransferase KATAMARI1, putative, expressed	IMGA|Medtr5g055350.1	Xyloglucan galactosyltransferase KATAMARI1 chr5 22252119-22253462 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003824|catalytic activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_04034	A	A1S	Potri.001G382300	Potri.001G382300(AS)	POPTR_0001s39110	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04035	A	A1S	Potri.001G382400	Potri.001G382400(AS)	POPTR_0001s39130	sp|Q39224|SRG1_ARATH	Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1	AT1G17020.1	| Symbols: SRG1, ATSRG1 | senescence-related gene 1 | chr1:5820258-5821741 FORWARD LENGTH=358	LOC_Os01g25010.1	protein|flavonol synthase/flavanone 3-hydroxylase, putative, expressed	IMGA|Medtr5g055680.1	Protein SRG1 chr5 22384306-22387839 F EGN_Mt100125 20111014	GO:0009737|response to abscisic acid stimulus GO:0009793|embryo development ending in seed dormancy GO:0009813|flavonoid biosynthetic process GO:0009830|cell wall modification involved in abscission GO:0009845|seed germination GO:0010162|seed dormancy process GO:0010260|organ senescence GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity GO:0016682|oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_04036	A	A1S	Potri.001G382500	Potri.001G382500(AS)	POPTR_0001s39150	sp|Q803A0|JADE1_DANRE	Protein Jade-1 OS=Danio rerio GN=phf17 PE=2 SV=1	AT3G14740.2	| Symbols: | RING/FYVE/PHD zinc finger superfamily protein | chr3:4952185-4953306 REVERSE LENGTH=343	LOC_Os01g08820.1	protein|PHD-finger domain containing protein, putative, expressed	NA	NA	NA	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_04037	A	A1S	Potri.001G382600	Potri.001G382600(AS)	POPTR_0001s39160	NA	NA	AT1G78560.1	| Symbols: | Sodium Bile acid symporter family | chr1:29546846-29548764 REVERSE LENGTH=401	NA	NA	NA	NA	GO:0006814|sodium ion transport GO:0035725|sodium ion transmembrane transport	GO:0005215|transporter activity GO:0008508|bile acid:sodium symporter activity	GO:0009507|chloroplast GO:0009941|chloroplast envelope GO:0016020|membrane
pt2_04038	C	C1S	Potri.001G382700	Potri.001G382700(CS)	NA	NA	AT3G14750.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67170.1); Has 4036 Blast hits to 3091 proteins in 519 species: Archae - 61; Bacteria - 669; Metazoa - 1503; Fungi - 255; Plants - 421; Viruses - 4; Other Eukaryotes - 1123 (source: NCBI BLink). | chr3:4953765-4955373 REVERSE LENGTH=331	LOC_Os07g32450.1	protein|protein kinase PKN/PRK1, effector, putative, expressed	IMGA|Medtr5g072760.1	hypothetical protein chr5 29972181-29976763 E EGN_Mt100125 20111014	GO:0008150|biological_process GO:0048573|photoperiodism, flowering	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_04039	A	A1S	Potri.001G382700	Potri.001G382700(AS)	POPTR_0001s39170	NA	NA	AT3G14750.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67170.1); Has 4036 Blast hits to 3091 proteins in 519 species: Archae - 61; Bacteria - 669; Metazoa - 1503; Fungi - 255; Plants - 421; Viruses - 4; Other Eukaryotes - 1123 (source: NCBI BLink). | chr3:4953765-4955373 REVERSE LENGTH=331	LOC_Os07g32450.1	protein|protein kinase PKN/PRK1, effector, putative, expressed	IMGA|Medtr5g072760.1	hypothetical protein chr5 29972181-29976763 E EGN_Mt100125 20111014	GO:0008150|biological_process GO:0048573|photoperiodism, flowering	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_04040	C	C1S	Potri.001G382800	Potri.001G382800(CS)	NA	NA	AT3G14760.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible; Has 63 Blast hits to 63 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:4956440-4957045 FORWARD LENGTH=168	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_04041	A	A1S	Potri.001G382900	Potri.001G382900(AS)	POPTR_0001s39190	NA	NA	AT5G35810.1	| Symbols: | Ankyrin repeat family protein | chr5:13993428-13994549 REVERSE LENGTH=347	NA	NA	IMGA|contig_62534_2.1	Unknown protein contig_62534 4441-2054 H PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_04042	C	C1A	Potri.001G383000	Potri.001G383000(CA)	sp|Q9LH79|SWET2_ARATH	Bidirectional sugar transporter SWEET2 OS=Arabidopsis thaliana GN=SWEET2 PE=2 SV=1	AT3G14770.1	| Symbols: SWEET2, AtSWEET2 | Nodulin MtN3 family protein | chr3:4957787-4959202 REVERSE LENGTH=236	LOC_Os01g36070.1	protein|nodulin MtN3 family protein, putative, expressed	IMGA|Medtr5g092600.1	Protein RUPTURED POLLEN GRAIN chr5 39407104-39405137 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function GO:0051119|sugar transmembrane transporter activity	GO:0005886|plasma membrane GO:0005887|integral to plasma membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_04043	C	C1S	Potri.001G383000	Potri.001G383000(CS)	sp|Q9LH79|SWET2_ARATH	Bidirectional sugar transporter SWEET2 OS=Arabidopsis thaliana GN=SWEET2 PE=2 SV=1	AT3G14770.1	| Symbols: SWEET2, AtSWEET2 | Nodulin MtN3 family protein | chr3:4957787-4959202 REVERSE LENGTH=236	LOC_Os01g36070.1	protein|nodulin MtN3 family protein, putative, expressed	IMGA|Medtr5g092600.1	Protein RUPTURED POLLEN GRAIN chr5 39407104-39405137 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function GO:0051119|sugar transmembrane transporter activity	GO:0005886|plasma membrane GO:0005887|integral to plasma membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_04044	A	A1S	Potri.001G383500	Potri.001G383500(AS)	POPTR_0001s39210	sp|Q9SYM5|RHM1_ARATH	Probable rhamnose biosynthetic enzyme 1 OS=Arabidopsis thaliana GN=RHM1 PE=1 SV=1	AT1G78570.1	| Symbols: RHM1, ROL1, ATRHM1 | rhamnose biosynthesis 1 | chr1:29550110-29552207 FORWARD LENGTH=669	LOC_Os03g17000.3	protein|NAD dependent epimerase/dehydratase family domain containing protein, expressed	IMGA|contig_164943_1.1	Dtdp-glucose 4 6-dehydratase contig_164943 3364-208 F PREDN 20111014	GO:0009225|nucleotide-sugar metabolic process GO:0009744|response to sucrose stimulus GO:0009813|flavonoid biosynthetic process GO:0010224|response to UV-B GO:0010253|UDP-rhamnose biosynthetic process GO:0010315|auxin efflux GO:0044237|cellular metabolic process GO:0045226|extracellular polysaccharide biosynthetic process GO:0051555|flavonol biosynthetic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0008831|dTDP-4-dehydrorhamnose reductase activity GO:0010280|UDP-L-rhamnose synthase activity GO:0050377|UDP-glucose 4,6-dehydratase activity GO:0050662|coenzyme binding	GO:0005829|cytosol GO:0009506|plasmodesma GO:0009507|chloroplast
pt2_04045	A	A1S	Potri.001G383600	Potri.001G383600(AS)	POPTR_0001s39220	sp|Q9SYM4|TPS1_ARATH	Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 OS=Arabidopsis thaliana GN=TPS1 PE=1 SV=1	AT1G78580.1	| Symbols: ATTPS1, TPS1 | trehalose-6-phosphate synthase | chr1:29552495-29557482 REVERSE LENGTH=942	LOC_Os05g44210.1	protein|trehalose-6-phosphate synthase, putative, expressed	IMGA|contig_56897_1.1	Trehalose 6-phosphate synthase contig_56897 3087-717 H PREDN 20111014	GO:0005991|trehalose metabolic process GO:0005992|trehalose biosynthetic process GO:0009664|plant-type cell wall organization GO:0009790|embryo development GO:0009793|embryo development ending in seed dormancy GO:0010182|sugar mediated signaling pathway	GO:0003824|catalytic activity GO:0003825|alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity GO:0016757|transferase activity, transferring glycosyl groups	GO:0005737|cytoplasm
pt2_04046	A	A1S	Potri.001G383700	Potri.001G383700(AS)	POPTR_0001s39230	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04047	A	A1S	Potri.001G383800	Potri.001G383800(AS)	POPTR_0001s39240	sp|P08770|TRA1_MAIZE	Putative AC transposase OS=Zea mays PE=2 SV=2	AT3G42170.1	| Symbols: | BED zinc finger ;hAT family dimerisation domain | chr3:14321838-14323928 FORWARD LENGTH=696	LOC_Os05g14940.1	protein|transposon protein, putative, unclassified, expressed	IMGA|Medtr5g088330.1	Oligoribonuclease chr5 37283827-37298839 E EGN_Mt100125 20111014	GO:0009791|post-embryonic development	GO:0003677|DNA binding GO:0046983|protein dimerization activity	GO:0005634|nucleus GO:0005829|cytosol
pt2_04048	A	A1S	Potri.001G383900	Potri.001G383900(AS)	POPTR_0001s39250	sp|Q9NPC3|CIP1_HUMAN	E3 ubiquitin-protein ligase CCNB1IP1 OS=Homo sapiens GN=CCNB1IP1 PE=1 SV=1	AT1G53490.1	| Symbols: | RING/U-box superfamily protein | chr1:19965146-19966811 FORWARD LENGTH=304	LOC_Os02g13810.1	protein|DNA binding protein, putative, expressed	NA	NA	GO:0007126|meiosis GO:0035825|reciprocal DNA recombination GO:0051026|chiasma assembly	GO:0003677|DNA binding	GO:0005634|nucleus GO:0005694|chromosome
pt2_04049	A	A1S	Potri.001G384000	Potri.001G384000(AS)	POPTR_0001s39260	sp|Q9SYM2|STHY_ARATH	Probable salt tolerance-like protein At1g78600 OS=Arabidopsis thaliana GN=At1g78600 PE=1 SV=2	AT1G78600.1	| Symbols: LZF1, STH3, DBB3 | light-regulated zinc finger protein 1 | chr1:29567370-29568662 FORWARD LENGTH=299	LOC_Os06g05890.1	protein|B-box zinc finger family protein, putative, expressed	IMGA|Medtr1g023260.1	Zinc finger protein CONSTANS-like protein chr1 7171447-7172677 F EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0006355|regulation of transcription, DNA-dependent GO:0006612|protein targeting to membrane GO:0009617|response to bacterium GO:0009641|shade avoidance GO:0009658|chloroplast organization GO:0009718|anthocyanin-containing compound biosynthetic process GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010099|regulation of photomorphogenesis GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0015995|chlorophyll biosynthetic process GO:0031348|negative regulation of defense response GO:0035304|regulation of protein dephosphorylation	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0008270|zinc ion binding	GO:0005634|nucleus GO:0016607|nuclear speck
pt2_04050	A	A1S	Potri.001G384100	Potri.001G384100(AS)	POPTR_0001s39270	sp|Q9SYM1|MSL6_ARATH	Mechanosensitive ion channel protein 6 OS=Arabidopsis thaliana GN=MSL6 PE=1 SV=1	AT1G78610.1	| Symbols: MSL6 | mechanosensitive channel of small conductance-like 6 | chr1:29569226-29572126 REVERSE LENGTH=856	LOC_Os02g44770.1	protein|uncharacterized mscS family protein, putative, expressed	NA	NA	GO:0055085|transmembrane transport	NA	GO:0005634|nucleus GO:0005774|vacuolar membrane GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane
pt2_04051	A	A2S	Potri.001G384200	Potri.001G384200(AS) Potri.001G384300(AA)	POPTR_0001s39280	NA	NA	AT3G49180.1	| Symbols: RID3 | Transducin/WD40 repeat-like superfamily protein | chr3:18229810-18231874 FORWARD LENGTH=438	LOC_Os09g30090.1	protein|WD domain, G-beta repeat domain containing protein, expressed	IMGA|Medtr1g034820.1	Pre-rRNA-processing protein IPI3 chr1 9616966-9623101 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0000166|nucleotide binding	GO:0005737|cytoplasm GO:0005834|heterotrimeric G-protein complex GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_04052	A	A1S	Potri.001G384300	Potri.001G384300(AS)	POPTR_0001s39290	sp|P73555|Y875_SYNY3	Uncharacterized membrane protein sll0875 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0875 PE=3 SV=1	AT1G78620.1	| Symbols: | Protein of unknown function DUF92, transmembrane | chr1:29573862-29575758 REVERSE LENGTH=333	LOC_Os01g52864.2	protein|transmembrane protein, putative, expressed	NA	NA	GO:0048767|root hair elongation	NA	GO:0009507|chloroplast GO:0009536|plastid GO:0009706|chloroplast inner membrane GO:0009941|chloroplast envelope GO:0016021|integral to membrane
pt2_04053	A	A1S	Potri.001G384400	Potri.001G384400(AS)	POPTR_0001s39300	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04054	A	A2S	Potri.001G384600	Potri.001G384600(AS) Potri.011G106100(DS)	POPTR_0001s39310	sp|Q9SYL9|RK13_ARATH	50S ribosomal protein L13, chloroplastic OS=Arabidopsis thaliana GN=RPL13 PE=1 SV=1	AT1G78630.1	| Symbols: emb1473 | Ribosomal protein L13 family protein | chr1:29575997-29577406 FORWARD LENGTH=241	LOC_Os01g54540.1	protein|ribosomal protein L13, putative, expressed	NA	NA	GO:0006412|translation GO:0009793|embryo development ending in seed dormancy GO:0045036|protein targeting to chloroplast	GO:0003735|structural constituent of ribosome	GO:0005840|ribosome GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009579|thylakoid GO:0009941|chloroplast envelope
pt2_04055	A	A2S	Potri.001G384600	Potri.001G384600(AS) Potri.011G106100(BS)	POPTR_0001s39310	sp|Q9SYL9|RK13_ARATH	50S ribosomal protein L13, chloroplastic OS=Arabidopsis thaliana GN=RPL13 PE=1 SV=1	AT1G78630.1	| Symbols: emb1473 | Ribosomal protein L13 family protein | chr1:29575997-29577406 FORWARD LENGTH=241	LOC_Os01g54540.1	protein|ribosomal protein L13, putative, expressed	NA	NA	GO:0006412|translation GO:0009793|embryo development ending in seed dormancy GO:0045036|protein targeting to chloroplast	GO:0003735|structural constituent of ribosome	GO:0005840|ribosome GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009579|thylakoid GO:0009941|chloroplast envelope
pt2_04056	A	A5S	Potri.001G385200	Potri.001G385200(AS) Potri.003G026100(AS) Potri.001G386000(BS) Potri.001G384700(BS) Potri.001G386400(DS)	POPTR_0001s39320	sp|C0LGN2|Y3148_ARATH	Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 OS=Arabidopsis thaliana GN=LRR-RLK PE=1 SV=1	AT3G14840.2	| Symbols: | Leucine-rich repeat transmembrane protein kinase | chr3:4988271-4993891 FORWARD LENGTH=1020	LOC_Os09g17630.1	protein|receptor-like protein kinase 2, putative, expressed	IMGA|Medtr5g083910.1	Cysteine-rich receptor-like protein kinase chr5 35206055-35197539 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005576|extracellular region GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_04057	A	A2S	Potri.001G385000	Potri.001G385000(AS) Potri.001G386200(DS)	POPTR_0001s39340	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04058	A	A2S	Potri.001G385100	Potri.001G385100(AS) Potri.001G384600(AS)	POPTR_0001s39350	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04059	A	A2S	Potri.001G385200	Potri.001G385200(AS) Potri.001G384700(BS)	POPTR_0001s39360	sp|C0LGN2|Y3148_ARATH	Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 OS=Arabidopsis thaliana GN=LRR-RLK PE=1 SV=1	AT3G14840.2	| Symbols: | Leucine-rich repeat transmembrane protein kinase | chr3:4988271-4993891 FORWARD LENGTH=1020	LOC_Os09g17630.1	protein|receptor-like protein kinase 2, putative, expressed	IMGA|Medtr5g083910.1	Cysteine-rich receptor-like protein kinase chr5 35206055-35197539 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005576|extracellular region GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_04060	A	A4S	Potri.001G385300	Potri.001G385300(AS) Potri.001G386100(BS) Potri.001G384800(BS) Potri.001G385800(DS)	POPTR_0001s39380	sp|C0LGG9|Y5344_ARATH	Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2	AT1G53440.1	| Symbols: | Leucine-rich repeat transmembrane protein kinase | chr1:19945959-19951562 FORWARD LENGTH=1035	LOC_Os09g17630.1	protein|receptor-like protein kinase 2, putative, expressed	IMGA|Medtr5g091950.1	BED finger-nbs resistance protein chr5 39093432-39086414 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_04061	A	A7S	Potri.001G385400	Potri.001G385400(AS) Potri.003G026300(BS) Potri.001G386500(BS) Potri.003G025800(BS) Potri.003G025600(BS) Potri.001G385600(BS) Potri.001G385900(BS)	POPTR_0001s39390	sp|C0LGG8|Y5343_ARATH	Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1	AT1G53440.1	| Symbols: | Leucine-rich repeat transmembrane protein kinase | chr1:19945959-19951562 FORWARD LENGTH=1035	LOC_Os09g17630.1	protein|receptor-like protein kinase 2, putative, expressed	IMGA|Medtr5g083910.1	Cysteine-rich receptor-like protein kinase chr5 35206055-35197539 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_04062	B	B1S	Potri.001G384700	Potri.001G384700(BS)	POPTR_0001s39400	sp|C0LGN2|Y3148_ARATH	Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 OS=Arabidopsis thaliana GN=LRR-RLK PE=1 SV=1	AT3G14840.2	| Symbols: | Leucine-rich repeat transmembrane protein kinase | chr3:4988271-4993891 FORWARD LENGTH=1020	LOC_Os09g17630.1	protein|receptor-like protein kinase 2, putative, expressed	IMGA|Medtr5g083910.1	Cysteine-rich receptor-like protein kinase chr5 35206055-35197539 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005576|extracellular region GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_04063	A	A7S	Potri.001G385600	Potri.001G385600(AS) Potri.003G026300(BS) Potri.001G386500(BS) Potri.001G385000(BS) Potri.001G386200(BS) Potri.003G025800(BS) Potri.001G385300(DS)	POPTR_0001s39410	sp|C0LGG9|Y5344_ARATH	Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2	AT1G53440.1	| Symbols: | Leucine-rich repeat transmembrane protein kinase | chr1:19945959-19951562 FORWARD LENGTH=1035	LOC_Os09g17630.1	protein|receptor-like protein kinase 2, putative, expressed	IMGA|Medtr5g091950.1	BED finger-nbs resistance protein chr5 39093432-39086414 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_04064	A	A7S	Potri.001G385600	Potri.001G385600(AS) Potri.003G026300(BS) Potri.001G386500(BS) Potri.001G385400(BS) Potri.003G025800(BS) Potri.003G025600(BS) Potri.001G385900(BS)	POPTR_0001s39420	sp|C0LGG9|Y5344_ARATH	Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2	AT1G53440.1	| Symbols: | Leucine-rich repeat transmembrane protein kinase | chr1:19945959-19951562 FORWARD LENGTH=1035	LOC_Os09g17630.1	protein|receptor-like protein kinase 2, putative, expressed	IMGA|Medtr5g091950.1	BED finger-nbs resistance protein chr5 39093432-39086414 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_04065	A	A7S	Potri.001G385600	Potri.001G385600(AS) Potri.003G026300(BS) Potri.001G386500(BS) Potri.001G385400(BS) Potri.003G025800(BS) Potri.003G025600(BS) Potri.001G385900(BS)	POPTR_0001s39420	sp|C0LGG9|Y5344_ARATH	Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2	AT1G53440.1	| Symbols: | Leucine-rich repeat transmembrane protein kinase | chr1:19945959-19951562 FORWARD LENGTH=1035	LOC_Os09g17630.1	protein|receptor-like protein kinase 2, putative, expressed	IMGA|Medtr5g091950.1	BED finger-nbs resistance protein chr5 39093432-39086414 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_04066	G	G1	NA	NA	POPTR_0001s39430	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04067	A	A2S	Potri.001G385800	Potri.001G385800(AS) Potri.003G026200(DS)	POPTR_0001s39440	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006468|protein phosphorylation GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_04068	A	A7S	Potri.001G385400	Potri.001G385400(AS) Potri.003G025800(AS) Potri.001G385900(AS) Potri.003G026300(BS) Potri.001G386500(BS) Potri.003G025600(BS) Potri.001G385600(BS)	POPTR_0001s39450	sp|C0LGG8|Y5343_ARATH	Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1	AT1G53440.1	| Symbols: | Leucine-rich repeat transmembrane protein kinase | chr1:19945959-19951562 FORWARD LENGTH=1035	LOC_Os09g17630.1	protein|receptor-like protein kinase 2, putative, expressed	IMGA|Medtr5g083910.1	Cysteine-rich receptor-like protein kinase chr5 35206055-35197539 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_04069	A	A3S	Potri.003G025900	Potri.003G025900(AS) Potri.001G385200(BS) Potri.001G384700(DS)	POPTR_0001s39455	sp|C0LGN2|Y3148_ARATH	Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 OS=Arabidopsis thaliana GN=LRR-RLK PE=1 SV=1	AT3G14840.2	| Symbols: | Leucine-rich repeat transmembrane protein kinase | chr3:4988271-4993891 FORWARD LENGTH=1020	LOC_Os09g17630.1	protein|receptor-like protein kinase 2, putative, expressed	IMGA|Medtr5g083910.1	Cysteine-rich receptor-like protein kinase chr5 35206055-35197539 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005576|extracellular region GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_04070	C	C1S	Potri.003G026100	Potri.003G026100(CS)	sp|C0LGN2|Y3148_ARATH	Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 OS=Arabidopsis thaliana GN=LRR-RLK PE=1 SV=1	AT3G14840.2	| Symbols: | Leucine-rich repeat transmembrane protein kinase | chr3:4988271-4993891 FORWARD LENGTH=1020	LOC_Os09g17630.1	protein|receptor-like protein kinase 2, putative, expressed	IMGA|Medtr5g083910.1	Cysteine-rich receptor-like protein kinase chr5 35206055-35197539 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005576|extracellular region GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_04071	A	A1S	Potri.003G026200	Potri.003G026200(AS)	POPTR_0001s39480	NA	NA	AT1G47890.1	| Symbols: AtRLP7, RLP7 | receptor like protein 7 | chr1:17643976-17647035 FORWARD LENGTH=1019	LOC_Os01g33090.1	protein|expressed protein	IMGA|Medtr5g011410.1	Protein kinase like protein chr5 3025593-3022609 E EGN_Mt100125 20111014	GO:0002237|response to molecule of bacterial origin GO:0006952|defense response GO:0007165|signal transduction GO:0010103|stomatal complex morphogenesis GO:0048443|stamen development	GO:0016301|kinase activity	NA
pt2_04072	A	A4S	Potri.001G386500	Potri.001G386500(AS) Potri.003G026300(BS) Potri.003G025800(BS) Potri.001G385600(BS)	POPTR_0001s39485	sp|C0LGG8|Y5343_ARATH	Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1	AT1G53440.1	| Symbols: | Leucine-rich repeat transmembrane protein kinase | chr1:19945959-19951562 FORWARD LENGTH=1035	LOC_Os09g17630.1	protein|receptor-like protein kinase 2, putative, expressed	IMGA|Medtr5g091950.1	BED finger-nbs resistance protein chr5 39093432-39086414 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_04073	A	A7S	Potri.003G026300	Potri.003G026300(AS) Potri.001G386500(BS) Potri.001G385400(DS) Potri.003G025800(DS) Potri.003G025600(DS) Potri.001G385600(DS) Potri.001G385900(DS)	POPTR_0001s39490	sp|C0LGG8|Y5343_ARATH	Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1	AT1G53430.1	| Symbols: | Leucine-rich repeat transmembrane protein kinase | chr1:19935298-19940959 FORWARD LENGTH=1030	LOC_Os09g17630.1	protein|receptor-like protein kinase 2, putative, expressed	IMGA|Medtr5g091950.1	BED finger-nbs resistance protein chr5 39093432-39086414 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_04074	A	A1S	Potri.003G026400	Potri.003G026400(AS)	POPTR_0001s39500	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_04075	A	A3S	Potri.001G386700	Potri.001G386700(AS) Potri.003G026500(BS) Potri.011G106600(DS)	POPTR_0001s39510	NA	NA	AT3G14830.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53450.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr3:4983386-4985666 FORWARD LENGTH=476	LOC_Os01g52920.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_04076	A	A2S	Potri.003G026600	Potri.003G026600(AS) Potri.001G386900(AS)	POPTR_0001s39520	sp|Q9ZV88|BEH4_ARATH	BES1/BZR1 homolog protein 4 OS=Arabidopsis thaliana GN=BEH4 PE=1 SV=1	AT1G78700.1	| Symbols: BEH4 | BES1/BZR1 homolog 4 | chr1:29599854-29601539 FORWARD LENGTH=325	LOC_Os06g35900.1	protein|BES1/BZR1 homolog protein, putative, expressed	IMGA|Medtr5g019550.1	BES1/BZR1-like protein chr5 7137260-7139041 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04077	A	A2S	Potri.001G387000	Potri.001G387000(AS) Potri.003G026700(AS)	POPTR_0001s39530	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04078	A	A2S	Potri.001G387000	Potri.001G387000(AS) Potri.003G026700(BS)	POPTR_0001s39530	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04079	C	C2S	Potri.003G026700	Potri.003G026700(CS) Potri.001G387000(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04080	A	A2S	Potri.003G026800	Potri.003G026800(AS) Potri.001G387100(BS)	POPTR_0001s39540	sp|O65355|GGH_ARATH	Gamma-glutamyl hydrolase OS=Arabidopsis thaliana GN=GGH PE=1 SV=2	AT1G78680.1	| Symbols: ATGGH2, GGH2 | gamma-glutamyl hydrolase 2 | chr1:29593933-29596037 FORWARD LENGTH=347	LOC_Os05g44130.1	protein|gamma-glutamyl hydrolase precursor, putative, expressed	NA	NA	GO:0006541|glutamine metabolic process GO:0006833|water transport GO:0006970|response to osmotic stress GO:0009611|response to wounding GO:0009651|response to salt stress GO:0009750|response to fructose stimulus GO:0009805|coumarin biosynthetic process GO:0046686|response to cadmium ion GO:0046900|tetrahydrofolylpolyglutamate metabolic process	GO:0003824|catalytic activity GO:0008242|omega peptidase activity GO:0016787|hydrolase activity	GO:0005576|extracellular region GO:0005773|vacuole
pt2_04081	A	A2S	Potri.001G387100	Potri.001G387100(AS) Potri.003G026800(BS)	POPTR_0001s39540	sp|O65355|GGH_ARATH	Gamma-glutamyl hydrolase OS=Arabidopsis thaliana GN=GGH PE=1 SV=2	AT1G78680.1	| Symbols: ATGGH2, GGH2 | gamma-glutamyl hydrolase 2 | chr1:29593933-29596037 FORWARD LENGTH=347	LOC_Os05g44130.1	protein|gamma-glutamyl hydrolase precursor, putative, expressed	NA	NA	GO:0006541|glutamine metabolic process GO:0006833|water transport GO:0006970|response to osmotic stress GO:0009611|response to wounding GO:0009651|response to salt stress GO:0009750|response to fructose stimulus GO:0009805|coumarin biosynthetic process GO:0046686|response to cadmium ion GO:0046900|tetrahydrofolylpolyglutamate metabolic process	GO:0003824|catalytic activity GO:0008242|omega peptidase activity GO:0016787|hydrolase activity	GO:0005576|extracellular region GO:0005773|vacuole
pt2_04082	C	C2S	Potri.003G026800	Potri.003G026800(CS) Potri.001G387100(CS)	sp|O65355|GGH_ARATH	Gamma-glutamyl hydrolase OS=Arabidopsis thaliana GN=GGH PE=1 SV=2	AT1G78680.1	| Symbols: ATGGH2, GGH2 | gamma-glutamyl hydrolase 2 | chr1:29593933-29596037 FORWARD LENGTH=347	LOC_Os05g44130.1	protein|gamma-glutamyl hydrolase precursor, putative, expressed	NA	NA	GO:0006541|glutamine metabolic process GO:0006833|water transport GO:0006970|response to osmotic stress GO:0009611|response to wounding GO:0009651|response to salt stress GO:0009750|response to fructose stimulus GO:0009805|coumarin biosynthetic process GO:0046686|response to cadmium ion GO:0046900|tetrahydrofolylpolyglutamate metabolic process	GO:0003824|catalytic activity GO:0008242|omega peptidase activity GO:0016787|hydrolase activity	GO:0005576|extracellular region GO:0005773|vacuole
pt2_04083	C	C1A	Potri.003G026800	Potri.003G026800(CA)	sp|O65355|GGH_ARATH	Gamma-glutamyl hydrolase OS=Arabidopsis thaliana GN=GGH PE=1 SV=2	AT1G78680.1	| Symbols: ATGGH2, GGH2 | gamma-glutamyl hydrolase 2 | chr1:29593933-29596037 FORWARD LENGTH=347	LOC_Os05g44130.1	protein|gamma-glutamyl hydrolase precursor, putative, expressed	NA	NA	GO:0006541|glutamine metabolic process GO:0006833|water transport GO:0006970|response to osmotic stress GO:0009611|response to wounding GO:0009651|response to salt stress GO:0009750|response to fructose stimulus GO:0009805|coumarin biosynthetic process GO:0046686|response to cadmium ion GO:0046900|tetrahydrofolylpolyglutamate metabolic process	GO:0003824|catalytic activity GO:0008242|omega peptidase activity GO:0016787|hydrolase activity	GO:0005576|extracellular region GO:0005773|vacuole
pt2_04084	A	A1S	Potri.001G387300	Potri.001G387300(AS)	POPTR_0001s39560	sp|Q9EQ28|DPOD3_MOUSE	DNA polymerase delta subunit 3 OS=Mus musculus GN=Pold3 PE=1 SV=2	AT1G78650.1	| Symbols: POLD3 | DNA-directed DNA polymerases | chr1:29582987-29585508 FORWARD LENGTH=509	LOC_Os01g10690.1	protein|POLD3 - Putative DNA polymerase delta complex subunit, expressed	NA	NA	GO:0000724|double-strand break repair via homologous recombination GO:0006260|DNA replication GO:0006261|DNA-dependent DNA replication GO:0006270|DNA replication initiation GO:0006271|DNA strand elongation involved in DNA replication GO:0006275|regulation of DNA replication GO:0006306|DNA methylation GO:0006355|regulation of transcription, DNA-dependent GO:0009555|pollen development GO:0016444|somatic cell DNA recombination GO:0016568|chromatin modification GO:0031047|gene silencing by RNA GO:0043687|post-translational protein modification GO:0045893|positive regulation of transcription, DNA-dependent GO:0051726|regulation of cell cycle	GO:0003887|DNA-directed DNA polymerase activity	GO:0005634|nucleus
pt2_04085	A	A1S	Potri.001G387400	Potri.001G387400(AS)	POPTR_0001s39570	sp|Q4V8W7|UBTD1_DANRE	Ubiquitin domain-containing protein 1 OS=Danio rerio GN=ubtd1 PE=2 SV=1	AT1G53400.1	| Symbols: | Ubiquitin domain-containing protein | chr1:19925009-19926400 FORWARD LENGTH=114	LOC_Os09g17620.1	protein|ubiquitin domain-containing protein 2, putative, expressed	NA	NA	GO:0006499|N-terminal protein myristoylation GO:0006944|cellular membrane fusion GO:0048193|Golgi vesicle transport	NA	GO:0005737|cytoplasm
pt2_04086	A	A1S	Potri.001G387500	Potri.001G387500(AS)	POPTR_0001s39580	NA	NA	AT3G14860.2	| Symbols: | NHL domain-containing protein | chr3:4998591-5000894 REVERSE LENGTH=493	LOC_Os02g13950.1	protein|NHL repeat-containing protein, putative, expressed	IMGA|Medtr5g034750.1	hypothetical protein chr5 14646649-14650651 E EGN_Mt100125 20111014	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0008150|biological_process GO:0009086|methionine biosynthetic process GO:0009616|virus induced gene silencing GO:0010050|vegetative phase change	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005576|extracellular region
pt2_04087	A	A1S	Potri.001G387600	Potri.001G387600(AS)	POPTR_0001s39590	sp|Q54XK2|SC61A_DICDI	Protein transport protein Sec61 subunit alpha OS=Dictyostelium discoideum GN=sec61a PE=3 SV=1	AT2G34250.2	| Symbols: | SecY protein transport family protein | chr2:14462635-14464572 FORWARD LENGTH=475	LOC_Os03g11440.1	protein|protein transport protein Sec61 subunit alpha, putative, expressed	NA	NA	GO:0006007|glucose catabolic process GO:0006098|pentose-phosphate shunt GO:0006499|N-terminal protein myristoylation GO:0006888|ER to Golgi vesicle-mediated transport GO:0009306|protein secretion GO:0009651|response to salt stress GO:0015031|protein transport GO:0043090|amino acid import	GO:0015450|P-P-bond-hydrolysis-driven protein transmembrane transporter activity	GO:0016020|membrane
pt2_04088	A	A1S	Potri.001G387700	Potri.001G387700(AS)	POPTR_0001s39610	NA	NA	AT1G53380.3	| Symbols: | Plant protein of unknown function (DUF641) | chr1:19913341-19914702 REVERSE LENGTH=453	LOC_Os10g23220.2	protein|GIL1, putative, expressed	IMGA|Medtr5g075180.1	hypothetical protein chr5 30936325-30937893 E EGN_Mt100125 20111014	GO:0006857|oligopeptide transport GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_04089	A	A1S	Potri.001G387800	Potri.001G387800(AS)	POPTR_0001s39620	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04090	A	A9S	Potri.001G387900	Potri.001G387900(AS) Potri.001G388100(BS) Potri.001G388400(BS) Potri.001G388800(BS) Potri.T061900(BS) Potri.T062200(BS) Potri.001G388600(DS) Potri.001G388200(DS) Potri.T062100(DS)	POPTR_0001s39630	sp|P43309|PPO_MALDO	Polyphenol oxidase, chloroplastic OS=Malus domestica PE=2 SV=1	NA	NA	LOC_Os04g53300.1	protein|polyphenol oxidase, putative, expressed	NA	NA	NA	NA	NA
pt2_04091	B	B1S	Potri.001G388000	Potri.001G388000(BS)	POPTR_0001s39640	sp|Q9ZP19|PPO1_IPOBA	Polyphenol oxidase I, chloroplastic OS=Ipomoea batatas GN=co-1 PE=1 SV=1	NA	NA	LOC_Os04g53290.1	protein|polyphenol oxidase protein, putative, expressed	NA	NA	NA	NA	NA
pt2_04092	A	A10S	Potri.001G388200	Potri.001G388200(AS) Potri.001G388100(BS) Potri.001G388600(BS) Potri.001G388400(BS) Potri.T062200(BS) Potri.T062100(BS) Potri.001G388800(DS) Potri.T061900(DS) Potri.001G387900(DS) Potri.001G388300(DS)	POPTR_0001s39660	sp|P43309|PPO_MALDO	Polyphenol oxidase, chloroplastic OS=Malus domestica PE=2 SV=1	NA	NA	LOC_Os04g53300.1	protein|polyphenol oxidase, putative, expressed	NA	NA	NA	NA	NA
pt2_04093	A	A9S	Potri.001G388300	Potri.001G388300(AS) Potri.001G388100(BS) Potri.001G388600(BS) Potri.001G388400(BS) Potri.001G388800(BS) Potri.T061900(BS) Potri.T062200(BS) Potri.T062100(BS) Potri.001G388200(DS)	POPTR_0001s39670	sp|P43309|PPO_MALDO	Polyphenol oxidase, chloroplastic OS=Malus domestica PE=2 SV=1	NA	NA	LOC_Os04g53300.1	protein|polyphenol oxidase, putative, expressed	NA	NA	NA	NA	NA
pt2_04094	A	A10S	Potri.001G388100	Potri.001G388100(AS) Potri.001G388400(AS) Potri.T062200(AS) Potri.001G388600(BS) Potri.001G388200(BS) Potri.001G388800(BS) Potri.T061900(BS) Potri.001G388300(BS) Potri.T062100(BS) Potri.001G387900(DS)	POPTR_0001s39680	sp|P43309|PPO_MALDO	Polyphenol oxidase, chloroplastic OS=Malus domestica PE=2 SV=1	NA	NA	LOC_Os04g53300.1	protein|polyphenol oxidase, putative, expressed	NA	NA	NA	NA	NA
pt2_04095	A	A10S	Potri.T062200	Potri.T062200(AS) Potri.001G388100(BS) Potri.001G388600(BS) Potri.001G388200(BS) Potri.001G388400(BS) Potri.001G388800(BS) Potri.T061900(BS) Potri.001G387900(BS) Potri.001G388300(BS) Potri.T062100(BS)	POPTR_0001s39680	sp|P43309|PPO_MALDO	Polyphenol oxidase, chloroplastic OS=Malus domestica PE=2 SV=1	NA	NA	LOC_Os04g53300.1	protein|polyphenol oxidase, putative, expressed	NA	NA	NA	NA	NA
pt2_04096	A	A3S	Potri.001G388500	Potri.001G388500(AS) Potri.T062000(BS) Potri.001G388700(BS)	POPTR_0001s39690	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04097	B	B1S	Potri.012G008400	Potri.012G008400(BS)	POPTR_0001s39700	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04098	A	A10S	Potri.001G388600	Potri.001G388600(AS) Potri.001G388200(AS) Potri.001G388800(AS) Potri.T061900(AS) Potri.001G387900(AS) Potri.T062200(AS) Potri.T062100(AS) Potri.001G388100(BS) Potri.001G388400(BS) Potri.001G388300(BS)	POPTR_0001s39900	sp|P43309|PPO_MALDO	Polyphenol oxidase, chloroplastic OS=Malus domestica PE=2 SV=1	NA	NA	LOC_Os04g53300.1	protein|polyphenol oxidase, putative, expressed	NA	NA	NA	NA	NA
pt2_04099	G	G1	NA	NA	POPTR_0001s39910	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04100	B	B10S	Potri.001G388100	Potri.001G388100(BS) Potri.001G388600(BS) Potri.001G388200(BS) Potri.001G388400(BS) Potri.T062200(BS) Potri.T062100(BS) Potri.001G388800(DS) Potri.T061900(DS) Potri.001G387900(DS) Potri.001G388300(DS)	POPTR_0001s39920	sp|P43309|PPO_MALDO	Polyphenol oxidase, chloroplastic OS=Malus domestica PE=2 SV=1	NA	NA	LOC_Os04g53300.1	protein|polyphenol oxidase, putative, expressed	NA	NA	NA	NA	NA
pt2_04101	A	A3S	Potri.T062000	Potri.T062000(AS) Potri.001G388700(BS) Potri.001G388500(DS)	POPTR_0001s39930	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04102	A	A9S	Potri.001G388800	Potri.001G388800(AS) Potri.T061900(AS) Potri.001G388100(BS) Potri.001G387900(BS) Potri.001G388300(BS) Potri.001G388600(DS) Potri.001G388400(DS) Potri.T062200(DS) Potri.T062100(DS)	POPTR_0001s39940	sp|P43309|PPO_MALDO	Polyphenol oxidase, chloroplastic OS=Malus domestica PE=2 SV=1	NA	NA	LOC_Os04g53300.1	protein|polyphenol oxidase, putative, expressed	NA	NA	NA	NA	NA
pt2_04103	A	A1S	Potri.001G388900	Potri.001G388900(AS)	POPTR_0001s39950	sp|P43309|PPO_MALDO	Polyphenol oxidase, chloroplastic OS=Malus domestica PE=2 SV=1	NA	NA	LOC_Os04g53300.1	protein|polyphenol oxidase, putative, expressed	NA	NA	NA	NA	NA
pt2_04104	A	A1S	Potri.001G389000	Potri.001G389000(AS)	POPTR_0001s39960	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04105	A	A1S	Potri.001G389100	Potri.001G389100(AS)	POPTR_0001s39970	sp|Q9C9H7|RLP12_ARATH	Receptor-like protein 12 OS=Arabidopsis thaliana GN=RLP12 PE=2 SV=2	AT1G45616.1	| Symbols: AtRLP6, RLP6 | receptor like protein 6 | chr1:17183550-17186534 REVERSE LENGTH=994	LOC_Os12g12010.1	protein|verticillium wilt disease resistance protein precursor, putative, expressed	IMGA|Medtr5g087090.1	Receptor-like protein kinase chr5 36701797-36698615 H EGN_Mt100125 20111014	GO:0002237|response to molecule of bacterial origin GO:0006952|defense response GO:0007165|signal transduction GO:0010103|stomatal complex morphogenesis GO:0048443|stamen development	NA	GO:0016020|membrane
pt2_04106	A	A1S	Potri.001G389200	Potri.001G389200(AS)	POPTR_0001s39980	sp|Q9SYK9|U74E2_ARATH	UDP-glycosyltransferase 74E2 OS=Arabidopsis thaliana GN=UGT74E2 PE=1 SV=1	AT1G05680.1	| Symbols: UGT74E2 | Uridine diphosphate glycosyltransferase 74E2 | chr1:1703196-1704639 REVERSE LENGTH=453	LOC_Os09g34250.1	protein|UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed	IMGA|Medtr5g035580.1	N-hydroxythioamide S-beta-glucosyltransferase chr5 15049155-15047304 E EGN_Mt100125 20111014	GO:0008152|metabolic process GO:0009407|toxin catabolic process GO:0010016|shoot morphogenesis GO:0010583|response to cyclopentenone GO:0042631|cellular response to water deprivation GO:0070301|cellular response to hydrogen peroxide GO:0071215|cellular response to abscisic acid stimulus GO:0071475|cellular hyperosmotic salinity response GO:0080024|indolebutyric acid metabolic process GO:0080167|response to karrikin	GO:0008194|UDP-glycosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups GO:0035251|UDP-glucosyltransferase activity GO:0052638|indole-3-butyrate beta-glucosyltransferase activity	GO:0005575|cellular_component
pt2_04107	A	A2S	Potri.001G389300	Potri.001G389300(AS) Potri.001G389700(DS)	POPTR_0001s39990	sp|B3DNN5|CDC16_ARATH	Anaphase-promoting complex subunit 6 OS=Arabidopsis thaliana GN=APC6 PE=2 SV=1	AT1G78770.1	| Symbols: APC6 | anaphase promoting complex 6 | chr1:29617421-29621273 FORWARD LENGTH=543	LOC_Os03g13370.1	protein|tetratricopeptide repeat domain containing protein, expressed	NA	NA	GO:0000280|nuclear division GO:0000724|double-strand break repair via homologous recombination GO:0006260|DNA replication GO:0006261|DNA-dependent DNA replication GO:0006270|DNA replication initiation GO:0006275|regulation of DNA replication GO:0006306|DNA methylation GO:0006346|methylation-dependent chromatin silencing GO:0006355|regulation of transcription, DNA-dependent GO:0007067|mitosis GO:0007129|synapsis GO:0007131|reciprocal meiotic recombination GO:0007155|cell adhesion GO:0007276|gamete generation GO:0008283|cell proliferation GO:0009165|nucleotide biosynthetic process GO:0009555|pollen development GO:0009909|regulation of flower development GO:0009965|leaf morphogenesis GO:0010087|phloem or xylem histogenesis GO:0010090|trichome morphogenesis GO:0010389|regulation of G2/M transition of mitotic cell cycle GO:0010564|regulation of cell cycle process GO:0016444|somatic cell DNA recombination GO:0016458|gene silencing GO:0016568|chromatin modification GO:0031047|gene silencing by RNA GO:0031048|chromatin silencing by small RNA GO:0032875|regulation of DNA endoreduplication GO:0034968|histone lysine methylation GO:0042023|DNA endoreduplication GO:0043687|post-translational protein modification GO:0045010|actin nucleation GO:0045893|positive regulation of transcription, DNA-dependent GO:0048765|root hair cell differentiation GO:0051225|spindle assembly GO:0051302|regulation of cell division GO:0051510|regulation of unidimensional cell growth GO:0051567|histone H3-K9 methylation GO:0051726|regulation of cell cycle GO:0071555|cell wall organization	GO:0005515|protein binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04108	A	A2S	Potri.001G389400	Potri.001G389400(AS) Potri.001G389800(DS)	POPTR_0001s40000	sp|P16273|PRPX_HORVU	Pathogen-related protein OS=Hordeum vulgare PE=2 SV=2	AT1G78780.2	| Symbols: | pathogenesis-related family protein | chr1:29621447-29622431 REVERSE LENGTH=238	LOC_Os01g53090.1	protein|pathogen-related protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005737|cytoplasm
pt2_04109	A	A3S	Potri.001G389500	Potri.001G389500(AS) Potri.011G108800(DS) Potri.001G389300(DS)	POPTR_0001s40010	sp|B3DNN5|CDC16_ARATH	Anaphase-promoting complex subunit 6 OS=Arabidopsis thaliana GN=APC6 PE=2 SV=1	AT1G78770.1	| Symbols: APC6 | anaphase promoting complex 6 | chr1:29617421-29621273 FORWARD LENGTH=543	LOC_Os03g13370.1	protein|tetratricopeptide repeat domain containing protein, expressed	NA	NA	GO:0000280|nuclear division GO:0000724|double-strand break repair via homologous recombination GO:0006260|DNA replication GO:0006261|DNA-dependent DNA replication GO:0006270|DNA replication initiation GO:0006275|regulation of DNA replication GO:0006306|DNA methylation GO:0006346|methylation-dependent chromatin silencing GO:0006355|regulation of transcription, DNA-dependent GO:0007067|mitosis GO:0007129|synapsis GO:0007131|reciprocal meiotic recombination GO:0007155|cell adhesion GO:0007276|gamete generation GO:0008283|cell proliferation GO:0009165|nucleotide biosynthetic process GO:0009555|pollen development GO:0009909|regulation of flower development GO:0009965|leaf morphogenesis GO:0010087|phloem or xylem histogenesis GO:0010090|trichome morphogenesis GO:0010389|regulation of G2/M transition of mitotic cell cycle GO:0010564|regulation of cell cycle process GO:0016444|somatic cell DNA recombination GO:0016458|gene silencing GO:0016568|chromatin modification GO:0031047|gene silencing by RNA GO:0031048|chromatin silencing by small RNA GO:0032875|regulation of DNA endoreduplication GO:0034968|histone lysine methylation GO:0042023|DNA endoreduplication GO:0043687|post-translational protein modification GO:0045010|actin nucleation GO:0045893|positive regulation of transcription, DNA-dependent GO:0048765|root hair cell differentiation GO:0051225|spindle assembly GO:0051302|regulation of cell division GO:0051510|regulation of unidimensional cell growth GO:0051567|histone H3-K9 methylation GO:0051726|regulation of cell cycle GO:0071555|cell wall organization	GO:0005515|protein binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04110	A	A3S	Potri.001G389700	Potri.001G389700(AS) Potri.011G108800(BS) Potri.001G389300(BS)	POPTR_0001s40020	sp|B3DNN5|CDC16_ARATH	Anaphase-promoting complex subunit 6 OS=Arabidopsis thaliana GN=APC6 PE=2 SV=1	AT1G78770.1	| Symbols: APC6 | anaphase promoting complex 6 | chr1:29617421-29621273 FORWARD LENGTH=543	LOC_Os03g13370.1	protein|tetratricopeptide repeat domain containing protein, expressed	NA	NA	GO:0000280|nuclear division GO:0000724|double-strand break repair via homologous recombination GO:0006260|DNA replication GO:0006261|DNA-dependent DNA replication GO:0006270|DNA replication initiation GO:0006275|regulation of DNA replication GO:0006306|DNA methylation GO:0006346|methylation-dependent chromatin silencing GO:0006355|regulation of transcription, DNA-dependent GO:0007067|mitosis GO:0007129|synapsis GO:0007131|reciprocal meiotic recombination GO:0007155|cell adhesion GO:0007276|gamete generation GO:0008283|cell proliferation GO:0009165|nucleotide biosynthetic process GO:0009555|pollen development GO:0009909|regulation of flower development GO:0009965|leaf morphogenesis GO:0010087|phloem or xylem histogenesis GO:0010090|trichome morphogenesis GO:0010389|regulation of G2/M transition of mitotic cell cycle GO:0010564|regulation of cell cycle process GO:0016444|somatic cell DNA recombination GO:0016458|gene silencing GO:0016568|chromatin modification GO:0031047|gene silencing by RNA GO:0031048|chromatin silencing by small RNA GO:0032875|regulation of DNA endoreduplication GO:0034968|histone lysine methylation GO:0042023|DNA endoreduplication GO:0043687|post-translational protein modification GO:0045010|actin nucleation GO:0045893|positive regulation of transcription, DNA-dependent GO:0048765|root hair cell differentiation GO:0051225|spindle assembly GO:0051302|regulation of cell division GO:0051510|regulation of unidimensional cell growth GO:0051567|histone H3-K9 methylation GO:0051726|regulation of cell cycle GO:0071555|cell wall organization	GO:0005515|protein binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04111	A	A1S	Potri.001G389800	Potri.001G389800(AS)	POPTR_0001s40030	sp|P16273|PRPX_HORVU	Pathogen-related protein OS=Hordeum vulgare PE=2 SV=2	AT1G78780.2	| Symbols: | pathogenesis-related family protein | chr1:29621447-29622431 REVERSE LENGTH=238	LOC_Os01g53090.1	protein|pathogen-related protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005737|cytoplasm
pt2_04112	G	G1	NA	NA	POPTR_0001s40040	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04113	A	A1S	Potri.001G390000	Potri.001G390000(AS)	POPTR_0001s40050	sp|O94738|ALG2_RHIPU	Alpha-1,3/1,6-mannosyltransferase ALG2 OS=Rhizomucor pusillus GN=ALG2 PE=1 SV=1	AT1G78800.1	| Symbols: | UDP-Glycosyltransferase superfamily protein | chr1:29625859-29627941 REVERSE LENGTH=403	LOC_Os04g49960.1	protein|glycosyl transferase, group 1 domain containing protein, expressed	IMGA|Medtr1g104880.1	"Alpha-1,3-mannosyltransferase ALG2" chr1 30909838-30913046 E EGN_Mt100125 20111014	GO:0009058|biosynthetic process	GO:0016757|transferase activity, transferring glycosyl groups	NA
pt2_04114	A	A1S	Potri.001G390100	Potri.001G390100(AS)	POPTR_0001s40060	sp|Q41558|HBP1C_WHEAT	Transcription factor HBP-1b(c1) (Fragment) OS=Triticum aestivum PE=1 SV=2	AT3G14880.2	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; BEST Arabidopsis thaliana protein match is: transcription factor-related (TAIR:AT4G18650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr3:5006565-5007689 FORWARD LENGTH=237	LOC_Os05g48650.1	protein|transcription factor HBP-1b, putative, expressed	IMGA|Medtr5g060950.1	Transcription factor TGA3 chr5 24561413-24559127 E EGN_Mt100125 20111014	GO:0080167|response to karrikin	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_04115	G	G1	NA	NA	POPTR_0001s40070	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04116	A	A1S	Potri.001G390200	Potri.001G390200(AS)	POPTR_0001s40080	sp|Q93VI8|TLP7_ARATH	Tubby-like F-box protein 7 OS=Arabidopsis thaliana GN=TULP7 PE=2 SV=1	AT1G53320.1	| Symbols: AtTLP7, TLP7 | tubby like protein 7 | chr1:19891237-19893429 REVERSE LENGTH=379	LOC_Os01g48370.1	protein|OsFBT1 - F-box and tubby domain containing protein, expressed	IMGA|Medtr5g020580.1	Tubby-like F-box protein chr5 7624254-7620655 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009555|pollen development GO:0009620|response to fungus	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008081|phosphoric diester hydrolase activity	GO:0005634|nucleus GO:0005829|cytosol GO:0005886|plasma membrane GO:0009536|plastid
pt2_04117	A	A1S	Potri.001G390400	Potri.001G390400(AS)	POPTR_0001s40090	sp|Q9LXT3|MBF1B_ARATH	Multiprotein-bridging factor 1b OS=Arabidopsis thaliana GN=MBF1B PE=2 SV=1	AT3G58680.1	| Symbols: MBF1B, ATMBF1B | multiprotein bridging factor 1B | chr3:21707367-21708625 FORWARD LENGTH=142	LOC_Os08g27850.1	protein|endothelial differentiation-related factor 1, putative, expressed	NA	NA	GO:0006351|transcription, DNA-dependent GO:0009723|response to ethylene stimulus GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003713|transcription coactivator activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus GO:0005730|nucleolus GO:0005737|cytoplasm
pt2_04118	A	A1S	Potri.001G390500	Potri.001G390500(AS)	POPTR_0001s40100	sp|Q96T60|PNKP_HUMAN	Bifunctional polynucleotide phosphatase/kinase OS=Homo sapiens GN=PNKP PE=1 SV=1	AT3G14890.1	| Symbols: | phosphoesterase | chr3:5008751-5013060 FORWARD LENGTH=694	LOC_Os01g53560.1	protein|phosphoesterase, putative, expressed	NA	NA	GO:0006261|DNA-dependent DNA replication	GO:0003677|DNA binding GO:0003824|catalytic activity GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_04119	A	A1S	Potri.001G390600	Potri.001G390600(AS)	POPTR_0001s40110	NA	NA	AT3G14900.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 17135 Blast hits to 10204 proteins in 644 species: Archae - 47; Bacteria - 1684; Metazoa - 5536; Fungi - 2506; Plants - 1043; Viruses - 361; Other Eukaryotes - 5958 (source: NCBI BLink). | chr3:5013442-5015277 REVERSE LENGTH=611	LOC_Os04g42030.1	protein|expressed protein	IMGA|Medtr5g080700.1	hypothetical protein chr5 33539669-33537804 E EGN_Mt100125 20111014	GO:0009790|embryo development	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_04120	A	A1S	Potri.001G390700	Potri.001G390700(AS)	POPTR_0001s40120	sp|Q9H2M9|RBGPR_HUMAN	Rab3 GTPase-activating protein non-catalytic subunit OS=Homo sapiens GN=RAB3GAP2 PE=1 SV=1	AT3G14910.1	| Symbols: | unknown protein; Has 158 Blast hits to 158 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 104; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). | chr3:5015432-5017566 FORWARD LENGTH=455	LOC_Os09g14680.1	protein|expressed protein	IMGA|contig_66517_1.1	RAB3 GTPase activating protein subunit 2 (Non-catalytic) contig_66517 2916-300 E PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_04121	A	A1S	Potri.001G390800	Potri.001G390800(AS)	POPTR_0001s40130	sp|Q93ZB6|DCUP1_ARATH	Uroporphyrinogen decarboxylase 1, chloroplastic OS=Arabidopsis thaliana GN=At3g14930 PE=2 SV=2	AT3G14930.2	| Symbols: HEME1 | Uroporphyrinogen decarboxylase | chr3:5020675-5022577 FORWARD LENGTH=418	LOC_Os01g43390.1	protein|uroporphyrinogen decarboxylase, putative, expressed	NA	NA	GO:0006569|tryptophan catabolic process GO:0006779|porphyrin-containing compound biosynthetic process GO:0009684|indoleacetic acid biosynthetic process GO:0046686|response to cadmium ion	GO:0004853|uroporphyrinogen decarboxylase activity	GO:0005737|cytoplasm GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_04122	A	A1S	Potri.001G390900	Potri.001G390900(AS)	POPTR_0001s40140	NA	NA	AT1G78815.1	| Symbols: LSH7 | Protein of unknown function (DUF640) | chr1:29632054-29632641 REVERSE LENGTH=195	LOC_Os01g61310.1	protein|DUF640 domain containing protein, putative, expressed	IMGA|Medtr5g072510.1	hypothetical protein chr5 29863728-29865781 E EGN_Mt100125 20111014	GO:0008150|biological_process GO:0009691|cytokinin biosynthetic process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_04123	A	A1S	Potri.001G391000	Potri.001G391000(AS)	POPTR_0001s40150	sp|Q39688|EP1G_DAUCA	Epidermis-specific secreted glycoprotein EP1 OS=Daucus carota GN=EP1 PE=1 SV=1	AT1G16905.1	| Symbols: | Curculin-like (mannose-binding) lectin family protein | chr1:5782546-5783817 REVERSE LENGTH=423	NA	NA	NA	NA	NA	GO:0030246|carbohydrate binding	GO:0005618|cell wall GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0005829|cytosol GO:0005886|plasma membrane GO:0009505|plant-type cell wall GO:0048046|apoplast
pt2_04124	A	A3S	Potri.001G391100	Potri.001G391100(AS) Potri.001G342800(DS) Potri.001G342900(DS)	POPTR_0001s40160	sp|Q9SV68|QORH_ARATH	Putative quinone-oxidoreductase homolog, chloroplastic OS=Arabidopsis thaliana GN=At4g13010 PE=2 SV=1	AT4G13010.1	| Symbols: | Oxidoreductase, zinc-binding dehydrogenase family protein | chr4:7600682-7602567 FORWARD LENGTH=329	LOC_Os04g30420.1	protein|dehydrogenase, putative, expressed	IMGA|AC225458_92.1	Quinone oxidoreductase-like protein AC225458.11 328100-329713 H EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0008270|zinc ion binding GO:0016491|oxidoreductase activity	GO:0005737|cytoplasm GO:0005773|vacuole GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009941|chloroplast envelope
pt2_04125	G	G1	NA	NA	POPTR_0001s40170	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04126	A	A1S	Potri.001G391200	Potri.001G391200(AS)	POPTR_0001s40180	sp|Q39688|EP1G_DAUCA	Epidermis-specific secreted glycoprotein EP1 OS=Daucus carota GN=EP1 PE=1 SV=1	AT1G78860.1	| Symbols: | D-mannose binding lectin protein with Apple-like carbohydrate-binding domain | chr1:29646168-29647499 REVERSE LENGTH=443	LOC_Os02g13965.1	protein|lectin protein kinase family protein, putative, expressed	IMGA|Medtr1g012550.1	S-receptor kinase -like protein chr1 2972904-2970427 H EGN_Mt100125 20111014	NA	GO:0030246|carbohydrate binding	GO:0005618|cell wall GO:0005886|plasma membrane GO:0009505|plant-type cell wall
pt2_04127	A	A1S	Potri.001G391300	Potri.001G391300(AS)	POPTR_0001s40200	sp|Q39688|EP1G_DAUCA	Epidermis-specific secreted glycoprotein EP1 OS=Daucus carota GN=EP1 PE=1 SV=1	AT1G78850.1	| Symbols: | D-mannose binding lectin protein with Apple-like carbohydrate-binding domain | chr1:29642072-29643397 REVERSE LENGTH=441	LOC_Os04g23760.1	protein|lectin protein kinase family protein, putative, expressed	IMGA|Medtr1g012550.1	S-receptor kinase -like protein chr1 2972904-2970427 H EGN_Mt100125 20111014	NA	GO:0030246|carbohydrate binding	GO:0005618|cell wall GO:0005886|plasma membrane GO:0009505|plant-type cell wall
pt2_04128	A	A1S	Potri.001G391400	Potri.001G391400(AS)	POPTR_0001s40210	sp|O82768|HIS2_ARATH	Histidine biosynthesis bifunctional protein hisIE, chloroplastic OS=Arabidopsis thaliana GN=At1g31860 PE=2 SV=1	AT1G31860.1	| Symbols: AT-IE, HISN2 | histidine biosynthesis bifunctional protein (HISIE) | chr1:11434250-11436530 REVERSE LENGTH=281	LOC_Os01g16940.1	protein|MazG nucleotide pyrophosphohydrolase domain containing protein, expressed	NA	NA	GO:0000105|histidine biosynthetic process GO:0009165|nucleotide biosynthetic process	GO:0004635|phosphoribosyl-AMP cyclohydrolase activity GO:0004636|phosphoribosyl-ATP diphosphatase activity	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_04129	R	R	NA	NA	POPTR_0001s40220	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04130	A	A4S	Potri.001G391700	Potri.001G391700(AS) Potri.001G391500(AS) Potri.007G118700(DS) Potri.013G071400(DA)	POPTR_0001s40230	NA	NA	AT5G41980.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:16793765-16794889 FORWARD LENGTH=374	LOC_Os06g38920.1	protein|transposon protein, putative, CACTA, En/Spm sub-class, expressed	IMGA|Medtr5g010555.1	PIF-like transposase chr5 2609522-2605622 E EGN_Mt100125 20111014	NA	GO:0003674|molecular_function GO:0016788|hydrolase activity, acting on ester bonds	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04131	A	A3S	Potri.013G071200	Potri.013G071200(AS) Potri.001G391600(AS) Potri.001G391800(AS)	POPTR_0001s40240	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04132	A	A2S	Potri.001G391900	Potri.001G391900(AS) Potri.011G110700(DS)	POPTR_0001s40250	sp|Q02909|CAPP1_SOYBN	Phosphoenolpyruvate carboxylase, housekeeping isozyme OS=Glycine max GN=PPC16 PE=2 SV=1	AT3G14940.1	| Symbols: ATPPC3, PPC3 | phosphoenolpyruvate carboxylase 3 | chr3:5025584-5029476 FORWARD LENGTH=968	LOC_Os08g27840.1	protein|phosphoenolpyruvate carboxylase, putative, expressed	IMGA|Medtr1g094000.1	Phosphoenolpyruvate carboxylase chr1 26591802-26593620 H EGN_Mt100125 20111014	GO:0006099|tricarboxylic acid cycle GO:0006826|iron ion transport GO:0010106|cellular response to iron ion starvation GO:0010167|response to nitrate GO:0015706|nitrate transport GO:0015977|carbon fixation	GO:0003824|catalytic activity GO:0008964|phosphoenolpyruvate carboxylase activity	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_04133	A	A1S	Potri.001G392000	Potri.001G392000(AS)	POPTR_0001s40260	sp|Q9FZ49|ALG9_ARATH	Dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Arabidopsis thaliana GN=ALG9 PE=1 SV=1	AT1G16900.1	| Symbols: | Alg9-like mannosyltransferase family | chr1:5779262-5782303 REVERSE LENGTH=570	LOC_Os01g11070.1	protein|Alg9-like mannosyltransferase protein, putative, expressed	NA	NA	GO:0006490|oligosaccharide-lipid intermediate biosynthetic process GO:0030433|ER-associated protein catabolic process	GO:0000026|alpha-1,2-mannosyltransferase activity GO:0004377|GDP-Man:Man3GlcNAc2-PP-Dol alpha-1,2-mannosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups GO:0030246|carbohydrate binding	GO:0005783|endoplasmic reticulum GO:0031227|intrinsic to endoplasmic reticulum membrane
pt2_04134	C	C1S	Potri.001G392100	Potri.001G392100(CS)	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_04135	A	A1S	Potri.001G392200	Potri.001G392200(AS)	POPTR_0001s40270	sp|Q96453|1433D_SOYBN	14-3-3-like protein D OS=Glycine max GN=GF14D PE=2 SV=1	AT2G42590.2	| Symbols: GRF9, GF14 MU | general regulatory factor 9 | chr2:17732118-17733775 REVERSE LENGTH=262	LOC_Os08g33370.1	protein|14-3-3 protein, putative, expressed	IMGA|Medtr5g044160.1	14-3-3-like protein GF14 iota chr5 18998222-19001446 F EGN_Mt100125 20111014	GO:0006096|glycolysis GO:0006833|water transport GO:0006972|hyperosmotic response GO:0007030|Golgi organization GO:0009266|response to temperature stimulus GO:0009651|response to salt stress GO:0009750|response to fructose stimulus GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019344|cysteine biosynthetic process GO:0032880|regulation of protein localization GO:0042744|hydrogen peroxide catabolic process GO:0046686|response to cadmium ion GO:0048528|post-embryonic root development	GO:0005509|calcium ion binding GO:0019904|protein domain specific binding GO:0045309|protein phosphorylated amino acid binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane GO:0009570|chloroplast stroma
pt2_04136	A	A1S	Potri.001G392200	Potri.001G392200(AS)	POPTR_0001s40270	sp|Q96453|1433D_SOYBN	14-3-3-like protein D OS=Glycine max GN=GF14D PE=2 SV=1	AT2G42590.2	| Symbols: GRF9, GF14 MU | general regulatory factor 9 | chr2:17732118-17733775 REVERSE LENGTH=262	LOC_Os08g33370.1	protein|14-3-3 protein, putative, expressed	IMGA|Medtr5g044160.1	14-3-3-like protein GF14 iota chr5 18998222-19001446 F EGN_Mt100125 20111014	GO:0006096|glycolysis GO:0006833|water transport GO:0006972|hyperosmotic response GO:0007030|Golgi organization GO:0009266|response to temperature stimulus GO:0009651|response to salt stress GO:0009750|response to fructose stimulus GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019344|cysteine biosynthetic process GO:0032880|regulation of protein localization GO:0042744|hydrogen peroxide catabolic process GO:0046686|response to cadmium ion GO:0048528|post-embryonic root development	GO:0005509|calcium ion binding GO:0019904|protein domain specific binding GO:0045309|protein phosphorylated amino acid binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane GO:0009570|chloroplast stroma
pt2_04137	A	A1S	Potri.001G392200	Potri.001G392200(AS)	POPTR_0001s40270	sp|Q96453|1433D_SOYBN	14-3-3-like protein D OS=Glycine max GN=GF14D PE=2 SV=1	AT2G42590.2	| Symbols: GRF9, GF14 MU | general regulatory factor 9 | chr2:17732118-17733775 REVERSE LENGTH=262	LOC_Os08g33370.1	protein|14-3-3 protein, putative, expressed	IMGA|Medtr5g044160.1	14-3-3-like protein GF14 iota chr5 18998222-19001446 F EGN_Mt100125 20111014	GO:0006096|glycolysis GO:0006833|water transport GO:0006972|hyperosmotic response GO:0007030|Golgi organization GO:0009266|response to temperature stimulus GO:0009651|response to salt stress GO:0009750|response to fructose stimulus GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019344|cysteine biosynthetic process GO:0032880|regulation of protein localization GO:0042744|hydrogen peroxide catabolic process GO:0046686|response to cadmium ion GO:0048528|post-embryonic root development	GO:0005509|calcium ion binding GO:0019904|protein domain specific binding GO:0045309|protein phosphorylated amino acid binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane GO:0009570|chloroplast stroma
pt2_04138	A	A1S	Potri.001G392300	Potri.001G392300(AS)	POPTR_0001s40280	NA	NA	AT3G50940.1	| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr3:18934086-18935528 FORWARD LENGTH=451	LOC_Os05g51130.1	protein|mitochondrial chaperone BCS1, putative, expressed	IMGA|Medtr5g020980.1	Cell division protease ftsH-like protein chr5 7784485-7791673 E EGN_Mt100125 20111014	GO:0009611|response to wounding GO:0009612|response to mechanical stimulus GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process GO:0010200|response to chitin GO:0052542|defense response by callose deposition	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity	GO:0005739|mitochondrion GO:0005886|plasma membrane
pt2_04139	A	A1S	Potri.001G392400	Potri.001G392400(AS)	POPTR_0001s40290	sp|O49813|OLEE1_BETPN	Olee1-like protein OS=Betula pendula PE=2 SV=1	AT1G29140.1	| Symbols: | Pollen Ole e 1 allergen and extensin family protein | chr1:10179029-10179811 FORWARD LENGTH=171	LOC_Os04g32680.1	protein|POEI20 - Pollen Ole e I allergen and extensin family protein precursor, expressed	NA	NA	GO:0008150|biological_process GO:0009827|plant-type cell wall modification GO:0009860|pollen tube growth	GO:0003674|molecular_function	GO:0005576|extracellular region GO:0048046|apoplast
pt2_04140	A	A2S	Potri.001G392500	Potri.001G392500(AS) Potri.011G111400(BS)	POPTR_0001s40300	sp|Q9FZ48|UBC36_ARATH	Ubiquitin-conjugating enzyme E2 36 OS=Arabidopsis thaliana GN=UBC36 PE=1 SV=1	AT1G16890.2	| Symbols: UBC36, UBC13B | ubiquitin-conjugating enzyme 36 | chr1:5776550-5778327 REVERSE LENGTH=153	LOC_Os01g48280.1	protein|ubiquitin-conjugating enzyme, putative, expressed	IMGA|Medtr5g075580.1	Ubiquitin carrier protein chr5 31157779-31152864 E EGN_Mt100125 20111014	GO:0006301|postreplication repair GO:0006511|ubiquitin-dependent protein catabolic process GO:0010039|response to iron ion GO:0010053|root epidermal cell differentiation GO:0046686|response to cadmium ion	GO:0004842|ubiquitin-protein ligase activity GO:0005515|protein binding GO:0016881|acid-amino acid ligase activity	GO:0005634|nucleus GO:0005829|cytosol GO:0005886|plasma membrane GO:0009507|chloroplast GO:0031372|UBC13-MMS2 complex
pt2_04141	A	A2S	Potri.001G392600	Potri.001G392600(AS) Potri.011G111500(DS)	POPTR_0001s40310	sp|Q9MAH1|TTL1_ARATH	TPR repeat-containing thioredoxin TTL1 OS=Arabidopsis thaliana GN=TTL1 PE=1 SV=1	AT1G53300.1	| Symbols: TTL1 | tetratricopetide-repeat thioredoxin-like 1 | chr1:19879726-19882375 FORWARD LENGTH=699	LOC_Os01g11920.1	protein|retrotransposon protein, putative, unclassified, expressed	IMGA|Medtr5g063200.1	Small glutamine-rich tetratricopeptide repeat-containing protein chr5 25499833-25496222 E EGN_Mt100125 20111014	GO:0006970|response to osmotic stress GO:0009651|response to salt stress GO:0009737|response to abscisic acid stimulus GO:0009789|positive regulation of abscisic acid mediated signaling pathway GO:0045454|cell redox homeostasis	NA	GO:0005634|nucleus
pt2_04142	A	A1S	Potri.001G392700	Potri.001G392700(AS)	POPTR_0001s40320	sp|Q8L7M1|B3GTE_ARATH	Probable beta-1,3-galactosyltransferase 14 OS=Arabidopsis thaliana GN=B3GALT14 PE=2 SV=1	AT1G53290.1	| Symbols: | Galactosyltransferase family protein | chr1:19871353-19873251 FORWARD LENGTH=345	LOC_Os06g06280.1	protein|galactosyltransferase family protein, putative, expressed	IMGA|contig_71025_1.1	Beta-1 3-galactosyltransferase contig_71025 2607-410 F PREDN 20111014	GO:0006486|protein glycosylation	GO:0008378|galactosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups	GO:0005794|Golgi apparatus GO:0016020|membrane
pt2_04143	A	A1S	Potri.001G392800	Potri.001G392800(AS)	POPTR_0001s40330	NA	NA	AT3G14980.1	| Symbols: | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein | chr3:5039931-5044811 REVERSE LENGTH=1189	LOC_Os04g59510.1	protein|PHD finger family protein, putative, expressed	IMGA|contig_50348_1.1	Unknown protein contig_50348 947-10280 E PREDN 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0007267|cell-cell signaling GO:0009616|virus induced gene silencing GO:0010267|production of ta-siRNAs involved in RNA interference GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0043971|histone H3-K18 acetylation GO:0043972|histone H3-K23 acetylation GO:0044030|regulation of DNA methylation GO:0044154|histone H3-K14 acetylation GO:0080188|RNA-directed DNA methylation	GO:0003677|DNA binding GO:0004402|histone acetyltransferase activity GO:0010385|double-stranded methylated DNA binding GO:0042393|histone binding	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_04144	A	A1S	Potri.001G392900	Potri.001G392900(AS)	POPTR_0001s40340	NA	NA	AT3G14980.1	| Symbols: | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein | chr3:5039931-5044811 REVERSE LENGTH=1189	LOC_Os04g35430.1	protein|PHD-finger domain containing protein, expressed	IMGA|contig_50348_1.1	Unknown protein contig_50348 947-10280 E PREDN 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0007267|cell-cell signaling GO:0009616|virus induced gene silencing GO:0010267|production of ta-siRNAs involved in RNA interference GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0043971|histone H3-K18 acetylation GO:0043972|histone H3-K23 acetylation GO:0044030|regulation of DNA methylation GO:0044154|histone H3-K14 acetylation GO:0080188|RNA-directed DNA methylation	GO:0003677|DNA binding GO:0004402|histone acetyltransferase activity GO:0010385|double-stranded methylated DNA binding GO:0042393|histone binding	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_04145	A	A3S	Potri.001G393000	Potri.001G393000(AS) Potri.011G109000(BS) Potri.001G390000(DS)	POPTR_0001s40350	sp|Q7KWM5|ALG2_DICDI	Alpha-1,3/1,6-mannosyltransferase ALG2 OS=Dictyostelium discoideum GN=alg2 PE=3 SV=1	AT1G78800.1	| Symbols: | UDP-Glycosyltransferase superfamily protein | chr1:29625859-29627941 REVERSE LENGTH=403	LOC_Os04g49960.1	protein|glycosyl transferase, group 1 domain containing protein, expressed	IMGA|Medtr1g104880.1	"Alpha-1,3-mannosyltransferase ALG2" chr1 30909838-30913046 E EGN_Mt100125 20111014	GO:0009058|biosynthetic process	GO:0016757|transferase activity, transferring glycosyl groups	NA
pt2_04146	A	A1S	Potri.001G393100	Potri.001G393100(AS)	POPTR_0001s40360	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04147	A	A1S	Potri.001G393200	Potri.001G393200(AS)	POPTR_0001s40370	sp|C0LGH3|Y5614_ARATH	Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2	AT1G16670.1	| Symbols: | Protein kinase superfamily protein | chr1:5697846-5699492 FORWARD LENGTH=390	LOC_Os02g06930.2	protein|protein kinase, putative, expressed	IMGA|Medtr5g091950.1	BED finger-nbs resistance protein chr5 39093432-39086414 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process GO:0009863|salicylic acid mediated signaling pathway GO:0030968|endoplasmic reticulum unfolded protein response GO:0031348|negative regulation of defense response GO:0045087|innate immune response GO:0046777|protein autophosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005575|cellular_component GO:0005886|plasma membrane
pt2_04148	A	A1S	Potri.001G393300	Potri.001G393300(AS)	POPTR_0001s40380	sp|Q9MAH4|AB10G_ARATH	ABC transporter G family member 10 OS=Arabidopsis thaliana GN=ABCG10 PE=3 SV=1	AT1G53270.1	| Symbols: | ABC-2 type transporter family protein | chr1:19862878-19864650 FORWARD LENGTH=590	LOC_Os01g42900.1	protein|ABC-2 type transporter domain containing protein, expressed	IMGA|contig_73877_2.1	ABC transporter G family member contig_73877 1922-4464 H PREDN 20111014	NA	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0005739|mitochondrion GO:0016020|membrane
pt2_04149	A	A1S	Potri.001G393400	Potri.001G393400(AS)	POPTR_0001s40390	sp|Q9LKA5|UMP1_ARATH	Uncharacterized protein At3g15000, mitochondrial OS=Arabidopsis thaliana GN=At3g15000 PE=1 SV=1	AT3G15000.1	| Symbols: | cobalt ion binding | chr3:5050321-5052121 FORWARD LENGTH=395	LOC_Os09g33480.1	protein|DAG protein, chloroplast precursor, putative, expressed	IMGA|Medtr1g092860.1	RNA-binding protein chr1 25969148-25965992 F EGN_Mt100125 20111014	GO:0009451|RNA modification GO:0016554|cytidine to uridine editing GO:0080156|mitochondrial mRNA modification	GO:0005515|protein binding GO:0050897|cobalt ion binding	GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_04150	A	A21S	Potri.001G393500	Potri.001G393500(AS) Potri.005G153700(DS) Potri.T098000(DS) Potri.001G299100(DS) Potri.017G072700(DS) Potri.001G297800(DS) Potri.018G075600(DS) Potri.011G094000(DS) Potri.004G097600(DS) Potri.002G200700(DS) Potri.014G026000(DS) Potri.003G006700(DS) Potri.012G066500(DS) Potri.008G176600(DS) Potri.005G163200(DS) Potri.001G182200(DS) Potri.015G012100(DS) Potri.017G062600(DS) Potri.001G238000(DS) Potri.004G148800(DS) Potri.001G402200(DS)	POPTR_0001s40400	NA	NA	AT5G05800.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 881 Blast hits to 512 proteins in 30 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 38; Plants - 833; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). | chr5:1743234-1744751 REVERSE LENGTH=449	LOC_Os12g10550.1	protein|transposon protein, putative, CACTA, En/Spm sub-class, expressed	IMGA|Medtr5g054570.1	PIF-like protein chr5 21936286-21937344 H EGN_Mt100125 20111014	GO:0008150|biological_process GO:0048573|photoperiodism, flowering	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_04151	B	B2S	Potri.001G393600	Potri.001G393600(BS) Potri.003G006600(DS)	POPTR_0001s40405	NA	NA	AT5G41980.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:16793765-16794889 FORWARD LENGTH=374	LOC_Os05g51760.1	protein|transposon protein, putative, CACTA, En/Spm sub-class, expressed	IMGA|Medtr1g059320.1	hypothetical protein chr1 15361664-15360985 H EGN_Mt100125 20111014	NA	GO:0003674|molecular_function GO:0016788|hydrolase activity, acting on ester bonds	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04152	A	A1S	Potri.001G393700	Potri.001G393700(AS)	POPTR_0001s40410	NA	NA	AT1G53250.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53800.1); Has 11909 Blast hits to 7704 proteins in 757 species: Archae - 51; Bacteria - 1338; Metazoa - 4550; Fungi - 987; Plants - 464; Viruses - 24; Other Eukaryotes - 4495 (source: NCBI BLink). | chr1:19857468-19859156 FORWARD LENGTH=371	LOC_Os10g12354.1	protein|endonuclease, putative, expressed	NA	NA	NA	NA	GO:0009507|chloroplast
pt2_04153	A	A1S	Potri.001G393800	Potri.001G393800(AS)	POPTR_0001s40420	sp|Q9LRR7|NCED3_ARATH	9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic OS=Arabidopsis thaliana GN=NCED3 PE=2 SV=1	AT3G14440.1	| Symbols: NCED3, ATNCED3, STO1, SIS7 | nine-cis-epoxycarotenoid dioxygenase 3 | chr3:4831678-4833477 REVERSE LENGTH=599	LOC_Os03g44380.1	protein|9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed	IMGA|Medtr5g025250.1	Carotenoid cleavage dioxygenase 4a chr5 9983054-9981315 H EGN_Mt100125 20111014	GO:0006970|response to osmotic stress GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009688|abscisic acid biosynthetic process GO:0009737|response to abscisic acid stimulus GO:0042538|hyperosmotic salinity response	GO:0045549|9-cis-epoxycarotenoid dioxygenase activity	GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009570|chloroplast stroma
pt2_04154	A	A1S	Potri.001G393900	Potri.001G393900(AS)	POPTR_0001s40430	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04155	A	A1S	Potri.001G394000	Potri.001G394000(AS)	POPTR_0001s40440	sp|Q5E9N0|BYST_BOVIN	Bystin OS=Bos taurus GN=BYSL PE=2 SV=1	AT1G31660.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Bystin (InterPro:IPR007955); Has 475 Blast hits to 467 proteins in 210 species: Archae - 0; Bacteria - 9; Metazoa - 155; Fungi - 139; Plants - 55; Viruses - 0; Other Eukaryotes - 117 (source: NCBI BLink). | chr1:11331176-11333440 REVERSE LENGTH=444	LOC_Os09g18320.1	protein|bystin, putative, expressed	IMGA|Medtr5g025980.1	Bystin chr5 10383957-10375233 E EGN_Mt100125 20111014	GO:0008150|biological_process GO:0009165|nucleotide biosynthetic process GO:0009220|pyrimidine ribonucleotide biosynthetic process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04156	A	A1S	Potri.001G394200	Potri.001G394200(AS)	POPTR_0001s40450	sp|Q8GXH3|OSB2_ARATH	Protein OSB2, chloroplastic OS=Arabidopsis thaliana GN=OSB2 PE=1 SV=2	AT4G20010.2	| Symbols: PTAC9, OSB2 | plastid transcriptionally active 9 | chr4:10842128-10843989 FORWARD LENGTH=371	LOC_Os01g72049.1	protein|retrotransposon, putative, centromere-specific, expressed	NA	NA	GO:0008150|biological_process	GO:0003697|single-stranded DNA binding	GO:0009295|nucleoid GO:0009507|chloroplast GO:0009508|plastid chromosome
pt2_04157	C	C1S	Potri.001G394200	Potri.001G394200(CS)	sp|Q8GXH3|OSB2_ARATH	Protein OSB2, chloroplastic OS=Arabidopsis thaliana GN=OSB2 PE=1 SV=2	AT4G20010.2	| Symbols: PTAC9, OSB2 | plastid transcriptionally active 9 | chr4:10842128-10843989 FORWARD LENGTH=371	LOC_Os01g72049.1	protein|retrotransposon, putative, centromere-specific, expressed	NA	NA	GO:0008150|biological_process	GO:0003697|single-stranded DNA binding	GO:0009295|nucleoid GO:0009507|chloroplast GO:0009508|plastid chromosome
pt2_04158	A	A1S	Potri.001G394300	Potri.001G394300(AS)	POPTR_0001s40470	sp|Q921Q3|ALG1_MOUSE	Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Mus musculus GN=Alg1 PE=2 SV=3	AT1G16570.1	| Symbols: | UDP-Glycosyltransferase superfamily protein | chr1:5670763-5673423 REVERSE LENGTH=465	LOC_Os03g08300.1	protein|glycosyl transferase, group 1 domain containing protein, expressed	NA	NA	GO:0009058|biosynthetic process GO:0016126|sterol biosynthetic process GO:0030244|cellulose biosynthetic process GO:0046520|sphingoid biosynthetic process GO:0048193|Golgi vesicle transport	GO:0016757|transferase activity, transferring glycosyl groups	NA
pt2_04159	A	A1S	Potri.001G394300	Potri.001G394300(AS)	POPTR_0001s40470	sp|Q921Q3|ALG1_MOUSE	Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Mus musculus GN=Alg1 PE=2 SV=3	AT1G16570.1	| Symbols: | UDP-Glycosyltransferase superfamily protein | chr1:5670763-5673423 REVERSE LENGTH=465	LOC_Os03g08300.1	protein|glycosyl transferase, group 1 domain containing protein, expressed	NA	NA	GO:0009058|biosynthetic process GO:0016126|sterol biosynthetic process GO:0030244|cellulose biosynthetic process GO:0046520|sphingoid biosynthetic process GO:0048193|Golgi vesicle transport	GO:0016757|transferase activity, transferring glycosyl groups	NA
pt2_04160	A	A1S	Potri.001G394300	Potri.001G394300(AS)	POPTR_0001s40470	sp|Q921Q3|ALG1_MOUSE	Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Mus musculus GN=Alg1 PE=2 SV=3	AT1G16570.1	| Symbols: | UDP-Glycosyltransferase superfamily protein | chr1:5670763-5673423 REVERSE LENGTH=465	LOC_Os03g08300.1	protein|glycosyl transferase, group 1 domain containing protein, expressed	NA	NA	GO:0009058|biosynthetic process GO:0016126|sterol biosynthetic process GO:0030244|cellulose biosynthetic process GO:0046520|sphingoid biosynthetic process GO:0048193|Golgi vesicle transport	GO:0016757|transferase activity, transferring glycosyl groups	NA
pt2_04161	A	A2S	Potri.001G394400	Potri.001G394400(AS) Potri.011G112700(DS)	POPTR_0001s40480	sp|P05414|GOX_SPIOL	Peroxisomal (S)-2-hydroxy-acid oxidase OS=Spinacia oleracea PE=1 SV=1	AT3G14420.2	| Symbols: | Aldolase-type TIM barrel family protein | chr3:4821804-4823899 FORWARD LENGTH=367	LOC_Os07g05820.2	protein|hydroxyacid oxidase 1, putative, expressed	NA	NA	GO:0042742|defense response to bacterium GO:0050665|hydrogen peroxide biosynthetic process GO:0055114|oxidation-reduction process	GO:0003824|catalytic activity GO:0008891|glycolate oxidase activity GO:0010181|FMN binding GO:0016491|oxidoreductase activity	GO:0005634|nucleus GO:0005777|peroxisome GO:0009506|plasmodesma GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0016020|membrane GO:0022626|cytosolic ribosome GO:0048046|apoplast
pt2_04162	A	A1S	Potri.001G394500	Potri.001G394500(AS)	POPTR_0001s40490	sp|Q94EI9|PT314_ARATH	Probable sugar phosphate/phosphate translocator At3g14410 OS=Arabidopsis thaliana GN=At3g14410 PE=2 SV=1	AT3G14410.1	| Symbols: | Nucleotide/sugar transporter family protein | chr3:4815982-4817852 REVERSE LENGTH=340	LOC_Os08g04110.1	protein|transporter, putative, expressed	IMGA|Medtr5g081710.1	Maturase chr5 33996127-34007844 E EGN_Mt100125 20111014	GO:0006863|purine nucleobase transport	GO:0008514|organic anion transmembrane transporter activity	GO:0005886|plasma membrane GO:0022626|cytosolic ribosome
pt2_04163	A	A2S	Potri.001G394600	Potri.001G394600(AS) Potri.011G112800(DS)	POPTR_0001s40500	sp|Q9FPS2|UBP25_ARATH	Ubiquitin carboxyl-terminal hydrolase 25 OS=Arabidopsis thaliana GN=UBP25 PE=2 SV=1	AT3G14400.1	| Symbols: UBP25 | ubiquitin-specific protease 25 | chr3:4811953-4815210 REVERSE LENGTH=661	LOC_Os05g43480.1	protein|ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed	IMGA|Medtr5g066000.1	Ubiquitin carboxyl-terminal hydrolase chr5 26818749-26826548 E EGN_Mt100125 20111014	GO:0006511|ubiquitin-dependent protein catabolic process	GO:0004221|ubiquitin thiolesterase activity GO:0004843|ubiquitin-specific protease activity	GO:0005634|nucleus
pt2_04164	A	A1S	Potri.001G394800	Potri.001G394800(AS)	POPTR_0001s40510	sp|P25317|GSTXA_TOBAC	Probable glutathione S-transferase parA OS=Nicotiana tabacum GN=PARA PE=2 SV=1	AT1G17180.1	| Symbols: ATGSTU25, GSTU25 | glutathione S-transferase TAU 25 | chr1:5872208-5872958 FORWARD LENGTH=221	LOC_Os09g20220.1	protein|glutathione S-transferase, putative, expressed	IMGA|contig_11749_1.1	Glutathione S-transferase contig_11749 1966-870 E PREDN 20111014	GO:0009407|toxin catabolic process GO:0010583|response to cyclopentenone	GO:0004364|glutathione transferase activity	GO:0005737|cytoplasm
pt2_04165	A	A1S	Potri.001G394900	Potri.001G394900(AS)	POPTR_0001s40520	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04166	A	A1S	Potri.001G395000	Potri.001G395000(AS)	POPTR_0001s40530	sp|Q8L7H1|FBL75_ARATH	F-box/LRR-repeat protein At4g14103 OS=Arabidopsis thaliana GN=At4g14103 PE=2 SV=1	AT4G14103.1	| Symbols: | F-box/RNI-like superfamily protein | chr4:8126948-8128305 FORWARD LENGTH=381	LOC_Os04g35970.1	protein|OsFBL17 - F-box domain and LRR containing protein, expressed	IMGA|contig_84306_1.1	F-box/LRR-repeat protein contig_84306 361-1895 H PREDN 20111014	GO:0006511|ubiquitin-dependent protein catabolic process	GO:0004842|ubiquitin-protein ligase activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04167	A	A1S	Potri.001G395100	Potri.001G395100(AS)	POPTR_0001s40540	sp|Q9FN29|ATB52_ARATH	Homeobox-leucine zipper protein ATHB-52 OS=Arabidopsis thaliana GN=ATHB-52 PE=2 SV=1	AT5G53980.1	| Symbols: ATHB52, HB52 | homeobox protein 52 | chr5:21914087-21914557 FORWARD LENGTH=156	LOC_Os09g21180.1	protein|homeobox associated leucine zipper, putative, expressed	IMGA|Medtr5g039000.2	Homeobox-leucine zipper protein chr5 16756377-16754506 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009637|response to blue light GO:0009646|response to absence of light	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_04168	A	A1S	Potri.001G395200	Potri.001G395200(AS)	POPTR_0001s40550	NA	NA	AT2G20562.1	| Symbols: | unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G31090.1); Has 70 Blast hits to 70 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:8850367-8850835 REVERSE LENGTH=73	LOC_Os01g11600.1	protein|expressed protein	NA	NA	NA	NA	NA
pt2_04169	A	A3S	Potri.001G395300	Potri.001G395300(AS) Potri.001G395400(BS) Potri.001G395700(BS)	POPTR_0001s40560	sp|Q9FNP9|AGCT_ARATH	Agmatine coumaroyltransferase OS=Arabidopsis thaliana GN=ACT PE=1 SV=1	AT5G39080.1	| Symbols: | HXXXD-type acyl-transferase family protein | chr5:15641681-15643072 FORWARD LENGTH=463	NA	NA	NA	NA	NA	GO:0016740|transferase activity GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0005575|cellular_component
pt2_04170	A	A1S	Potri.001G395400	Potri.001G395400(AS)	POPTR_0001s40570	sp|Q9FNP9|AGCT_ARATH	Agmatine coumaroyltransferase OS=Arabidopsis thaliana GN=ACT PE=1 SV=1	AT5G39050.1	| Symbols: | HXXXD-type acyl-transferase family protein | chr5:15634596-15636005 FORWARD LENGTH=469	LOC_Os07g23150.1	protein|transferase family protein, putative, expressed	IMGA|contig_88875_1.1	Malonyl CoA anthocyanin 5-O-glucoside-6'-O-malonyltransferase contig_88875 1283-550 E PREDN 20111014	NA	GO:0016740|transferase activity GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups GO:0050736|O-malonyltransferase activity	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_04171	A	A1S	Potri.001G395500	Potri.001G395500(AS)	POPTR_0001s40580	NA	NA	AT5G28780.1	| Symbols: | PIF1 helicase | chr5:10812907-10814173 REVERSE LENGTH=337	LOC_Os04g23360.1	protein|retrotransposon protein, putative, unclassified, expressed	IMGA|Medtr5g027410.1	ATP-dependent DNA helicase PIF1 chr5 11142764-11148044 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04172	A	A3S	Potri.001G395600	Potri.001G395600(AS) Potri.001G395700(BS) Potri.001G395900(DS)	POPTR_0001s40590	sp|Q8GSN8|3MAT_DAHPI	Malonyl-coenzyme A:anthocyanin 3-O-glucoside-6''-O-malonyltransferase OS=Dahlia pinnata GN=3MAT PE=1 SV=1	AT3G29590.1	| Symbols: AT5MAT | HXXXD-type acyl-transferase family protein | chr3:11398917-11400266 REVERSE LENGTH=449	LOC_Os02g57480.1	protein|transferase family protein, putative, expressed	IMGA|contig_88875_1.1	Malonyl CoA anthocyanin 5-O-glucoside-6'-O-malonyltransferase contig_88875 1283-550 E PREDN 20111014	GO:0009718|anthocyanin-containing compound biosynthetic process GO:0009744|response to sucrose stimulus GO:0010224|response to UV-B	GO:0016740|transferase activity GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups GO:0050736|O-malonyltransferase activity	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_04173	A	A3S	Potri.001G395700	Potri.001G395700(AS) Potri.001G395600(BS) Potri.001G395900(DS)	POPTR_0001s40600	sp|Q9FNP9|AGCT_ARATH	Agmatine coumaroyltransferase OS=Arabidopsis thaliana GN=ACT PE=1 SV=1	AT5G39050.1	| Symbols: | HXXXD-type acyl-transferase family protein | chr5:15634596-15636005 FORWARD LENGTH=469	LOC_Os02g57480.1	protein|transferase family protein, putative, expressed	IMGA|contig_88875_1.1	Malonyl CoA anthocyanin 5-O-glucoside-6'-O-malonyltransferase contig_88875 1283-550 E PREDN 20111014	NA	GO:0016740|transferase activity GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0005575|cellular_component
pt2_04174	C	C1S	Potri.001G395800	Potri.001G395800(CS)	NA	NA	NA	NA	LOC_Os11g47410.1	protein|retrotransposon protein, putative, unclassified, expressed	IMGA|Medtr5g071700.1	ATP-dependent DNA helicase PIF1 chr5 29482742-29481263 H EGN_Mt100125 20111014	NA	NA	NA
pt2_04175	A	A3S	Potri.001G395900	Potri.001G395900(AS) Potri.001G395600(DS) Potri.001G395700(DS)	POPTR_0001s40620	sp|Q9FNP9|AGCT_ARATH	Agmatine coumaroyltransferase OS=Arabidopsis thaliana GN=ACT PE=1 SV=1	AT5G39050.1	| Symbols: | HXXXD-type acyl-transferase family protein | chr5:15634596-15636005 FORWARD LENGTH=469	LOC_Os07g23150.1	protein|transferase family protein, putative, expressed	IMGA|contig_88875_1.1	Malonyl CoA anthocyanin 5-O-glucoside-6'-O-malonyltransferase contig_88875 1283-550 E PREDN 20111014	NA	GO:0016740|transferase activity GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups GO:0050736|O-malonyltransferase activity	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_04176	G	G4	NA	NA	POPTR_0001s40630	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04177	A	A1S	Potri.001G396000	Potri.001G396000(AS)	POPTR_0001s40650	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04178	A	A1S	Potri.001G396100	Potri.001G396100(AS)	POPTR_0001s40660	sp|O49453|Y4844_ARATH	Uncharacterized protein At4g28440 OS=Arabidopsis thaliana GN=At4g28440 PE=1 SV=1	AT1G23750.1	| Symbols: | Nucleic acid-binding, OB-fold-like protein | chr1:8400638-8401171 FORWARD LENGTH=137	LOC_Os01g13700.1	protein|DNA-binding protein-related, putative, expressed	IMGA|Medtr5g034290.1	OB-fold nucleic acid binding domain containing protein chr5 14413270-14417620 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_04179	C	C1S	Potri.001G396200	Potri.001G396200(CS)	sp|Q9FN30|TAT2_ARATH	Probable aminotransferase TAT2 OS=Arabidopsis thaliana GN=At5g53970 PE=2 SV=1	AT5G53970.1	| Symbols: | Tyrosine transaminase family protein | chr5:21910676-21912594 FORWARD LENGTH=414	LOC_Os02g20360.2	protein|tyrosine aminotransferase, putative, expressed	IMGA|contig_58137_1.1	Aminotransferase family protein contig_58137 2994-936 E PREDN 20111014	GO:0009058|biosynthetic process GO:0010189|vitamin E biosynthetic process	GO:0004838|L-tyrosine:2-oxoglutarate aminotransferase activity GO:0008483|transaminase activity	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_04180	C	C2S	Potri.001G396300	Potri.001G396300(CS) Potri.001G396400(CS)	sp|O04017|NAC98_ARATH	Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana GN=NAC098 PE=1 SV=1	AT5G53950.1	| Symbols: CUC2, ANAC098, ATCUC2 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein | chr5:21901966-21903795 REVERSE LENGTH=375	LOC_Os06g23650.1	protein|no apical meristem protein, putative, expressed	IMGA|contig_11212_1.1	NAC domain protein contig_11212 281-2118 H PREDN 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0007275|multicellular organismal development GO:0009965|leaf morphogenesis GO:0010072|primary shoot apical meristem specification GO:0010160|formation of organ boundary GO:0010223|secondary shoot formation GO:0048366|leaf development GO:0048504|regulation of timing of organ formation	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04181	A	A1S	Potri.001G396500	Potri.001G396500(AS)	POPTR_0001s40690	NA	NA	AT3G15180.2	| Symbols: | ARM repeat superfamily protein | chr3:5111952-5115803 FORWARD LENGTH=551	LOC_Os05g48340.1	protein|proteasome-related, putative, expressed	NA	NA	GO:0009410|response to xenobiotic stimulus GO:0042023|DNA endoreduplication GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0043248|proteasome assembly GO:0048522|positive regulation of cellular process GO:0051510|regulation of unidimensional cell growth GO:0051788|response to misfolded protein	GO:0044183|protein binding involved in protein folding	GO:0005634|nucleus GO:0005774|vacuolar membrane GO:0009506|plasmodesma
pt2_04182	A	A1S	Potri.001G396500	Potri.001G396500(AS)	POPTR_0001s40690	NA	NA	AT3G15180.2	| Symbols: | ARM repeat superfamily protein | chr3:5111952-5115803 FORWARD LENGTH=551	LOC_Os05g48340.1	protein|proteasome-related, putative, expressed	NA	NA	GO:0009410|response to xenobiotic stimulus GO:0042023|DNA endoreduplication GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0043248|proteasome assembly GO:0048522|positive regulation of cellular process GO:0051510|regulation of unidimensional cell growth GO:0051788|response to misfolded protein	GO:0044183|protein binding involved in protein folding	GO:0005634|nucleus GO:0005774|vacuolar membrane GO:0009506|plasmodesma
pt2_04183	A	A1S	Potri.001G396500	Potri.001G396500(AS)	POPTR_0001s40690	NA	NA	AT3G15180.2	| Symbols: | ARM repeat superfamily protein | chr3:5111952-5115803 FORWARD LENGTH=551	LOC_Os05g48340.1	protein|proteasome-related, putative, expressed	NA	NA	GO:0009410|response to xenobiotic stimulus GO:0042023|DNA endoreduplication GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0043248|proteasome assembly GO:0048522|positive regulation of cellular process GO:0051510|regulation of unidimensional cell growth GO:0051788|response to misfolded protein	GO:0044183|protein binding involved in protein folding	GO:0005634|nucleus GO:0005774|vacuolar membrane GO:0009506|plasmodesma
pt2_04184	A	A1S	Potri.001G396600	Potri.001G396600(AS)	POPTR_0001s40700	sp|Q9ASV6|RR20_ARATH	30S ribosomal protein S20, chloroplastic OS=Arabidopsis thaliana GN=RPS20 PE=1 SV=1	AT3G15190.1	| Symbols: | chloroplast 30S ribosomal protein S20, putative | chr3:5116216-5117412 FORWARD LENGTH=202	LOC_Os01g48690.2	protein|ribosomal protein rpS20, putative, expressed	NA	NA	GO:0006364|rRNA processing GO:0006412|translation GO:0015995|chlorophyll biosynthetic process	GO:0003723|RNA binding GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005840|ribosome GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope GO:0016020|membrane
pt2_04185	A	A1S	Potri.001G396700	Potri.001G396700(AS)	POPTR_0001s40710	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005739|mitochondrion GO:0005840|ribosome GO:0015934|large ribosomal subunit
pt2_04186	A	A1S	Potri.001G396800	Potri.001G396800(AS)	POPTR_0001s40720	sp|Q9SFC7|FB135_ARATH	F-box protein At3g07870 OS=Arabidopsis thaliana GN=At3g07870 PE=2 SV=1	AT3G07870.1	| Symbols: | F-box and associated interaction domains-containing protein | chr3:2510871-2512124 FORWARD LENGTH=417	LOC_Os12g03440.1	protein|OsFBX436 - F-box domain containing protein, expressed	IMGA|Medtr5g027370.1	F-box family protein chr5 11126676-11125166 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_04187	A	A1S	Potri.001G396900	Potri.001G396900(AS)	POPTR_0001s40730	sp|Q8LFP1|PRA1H_ARATH	PRA1 family protein H OS=Arabidopsis thaliana GN=PRA1H PE=2 SV=1	AT4G27540.1	| Symbols: PRA1.H | prenylated RAB acceptor 1.H | chr4:13753449-13754660 REVERSE LENGTH=241	LOC_Os09g04880.2	protein|expressed protein	NA	NA	GO:0006914|autophagy GO:0016192|vesicle-mediated transport	GO:0003674|molecular_function	GO:0005783|endoplasmic reticulum
pt2_04188	A	A2S	Potri.001G397000	Potri.001G397000(AS) Potri.011G115900(DS)	POPTR_0001s40740	NA	NA	AT5G53930.1	| Symbols: | unknown protein; LOCATED IN: chloroplast; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:21894387-21896283 REVERSE LENGTH=529	NA	NA	NA	NA	NA	NA	GO:0005634|nucleus
pt2_04189	A	A1S	Potri.001G397100	Potri.001G397100(AS)	POPTR_0001s40760	sp|Q9ZR14|Y4317_ARATH	Putative B3 domain-containing protein At4g03170 OS=Arabidopsis thaliana GN=At4g03170 PE=2 SV=1	AT4G03170.1	| Symbols: | AP2/B3-like transcriptional factor family protein | chr4:1400832-1401584 FORWARD LENGTH=250	NA	NA	NA	NA	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04190	A	A1S	Potri.001G397200	Potri.001G397200(AS)	POPTR_0001s40770	sp|O80340|ERF78_ARATH	Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana GN=ERF4 PE=1 SV=1	AT3G15210.1	| Symbols: ATERF-4, ERF4, RAP2.5, ATERF4 | ethylene responsive element binding factor 4 | chr3:5121472-5122140 FORWARD LENGTH=222	LOC_Os02g09650.1	protein|AP2 domain containing protein, expressed	IMGA|Medtr5g085070.1	Ethylene responsive transcription factor chr5 35698759-35697527 F EGN_Mt100125 20111014	GO:0002679|respiratory burst involved in defense response GO:0006355|regulation of transcription, DNA-dependent GO:0009723|response to ethylene stimulus GO:0009737|response to abscisic acid stimulus GO:0009864|induced systemic resistance, jasmonic acid mediated signaling pathway GO:0010105|negative regulation of ethylene mediated signaling pathway GO:0010200|response to chitin GO:0035556|intracellular signal transduction GO:0045892|negative regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus GO:0016604|nuclear body
pt2_04191	A	A1S	Potri.001G397300	Potri.001G397300(AS)	POPTR_0001s40780	NA	NA	NA	NA	NA	NA	IMGA|Medtr5g021860.1	F-box chr5 8273544-8270928 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_04192	G	G1	NA	NA	POPTR_0001s40790	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04193	A	A5S	Potri.001G401200	Potri.001G401200(AS) Potri.001G397500(AS) Potri.001G429300(BS) Potri.002G210600(DS) Potri.007G064700(DS)	POPTR_0001s40795	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04194	A	A1S	Potri.001G397600	Potri.001G397600(AS)	POPTR_0001s40800	sp|B0LT89|STK24_RAT	Serine/threonine-protein kinase 24 OS=Rattus norvegicus GN=Stk24 PE=2 SV=1	AT3G15220.1	| Symbols: | Protein kinase superfamily protein | chr3:5126899-5131752 REVERSE LENGTH=690	LOC_Os07g32400.1	protein|STE_PAK_Ste20_MST_like.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	IMGA|contig_239206_1.1	Serine/threonine protein kinase contig_239206 2994-388 H PREDN 20111014	GO:0006468|protein phosphorylation GO:0045727|positive regulation of translation	GO:0004672|protein kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005737|cytoplasm GO:0005819|spindle
pt2_04195	A	A1S	Potri.001G397600	Potri.001G397600(AS)	POPTR_0001s40800	sp|B0LT89|STK24_RAT	Serine/threonine-protein kinase 24 OS=Rattus norvegicus GN=Stk24 PE=2 SV=1	AT3G15220.1	| Symbols: | Protein kinase superfamily protein | chr3:5126899-5131752 REVERSE LENGTH=690	LOC_Os07g32400.1	protein|STE_PAK_Ste20_MST_like.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	IMGA|contig_239206_1.1	Serine/threonine protein kinase contig_239206 2994-388 H PREDN 20111014	GO:0006468|protein phosphorylation GO:0045727|positive regulation of translation	GO:0004672|protein kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005737|cytoplasm GO:0005819|spindle
pt2_04196	A	A1S	Potri.001G397600	Potri.001G397600(AS)	POPTR_0001s40800	sp|B0LT89|STK24_RAT	Serine/threonine-protein kinase 24 OS=Rattus norvegicus GN=Stk24 PE=2 SV=1	AT3G15220.1	| Symbols: | Protein kinase superfamily protein | chr3:5126899-5131752 REVERSE LENGTH=690	LOC_Os07g32400.1	protein|STE_PAK_Ste20_MST_like.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	IMGA|contig_239206_1.1	Serine/threonine protein kinase contig_239206 2994-388 H PREDN 20111014	GO:0006468|protein phosphorylation GO:0045727|positive regulation of translation	GO:0004672|protein kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005737|cytoplasm GO:0005819|spindle
pt2_04197	G	G1	NA	NA	POPTR_0001s40820	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04198	A	A1S	Potri.001G397800	Potri.001G397800(AS)	POPTR_0001s40830	sp|P0C7P8|LHWL1_ARATH	Transcription factor EMB1444 OS=Arabidopsis thaliana GN=EMB1444 PE=2 SV=1	AT5G53900.2	| Symbols: | Serine/threonine-protein kinase WNK (With No Lysine)-related | chr5:21881375-21883133 REVERSE LENGTH=377	LOC_Os11g25920.1	protein|transcription factor-related, putative, expressed	IMGA|Medtr5g034840.1	"Basic helix-loop-helix protein, putative" chr5 14711620-14709328 F EGN_Mt100125 20111014	GO:0008150|biological_process GO:0009736|cytokinin mediated signaling pathway	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04199	A	A1S	Potri.001G397900	Potri.001G397900(AS)	POPTR_0001s40840	sp|Q9FMY1|C86B1_ARATH	Cytochrome P450 86B1 OS=Arabidopsis thaliana GN=CYP86B1 PE=2 SV=1	AT4G39490.1	| Symbols: CYP96A10 | cytochrome P450, family 96, subfamily A, polypeptide 10 | chr4:18365229-18366788 FORWARD LENGTH=519	LOC_Os03g04680.1	protein|cytochrome P450, putative, expressed	IMGA|contig_93731_1.1	Cytochrome P450 contig_93731 5-1288 H PREDN 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0020037|heme binding	GO:0005576|extracellular region
pt2_04200	A	A1S	Potri.001G398000	Potri.001G398000(AS)	POPTR_0001s40850	NA	NA	AT1G53163.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15250.1); Has 315 Blast hits to 216 proteins in 74 species: Archae - 0; Bacteria - 86; Metazoa - 43; Fungi - 52; Plants - 27; Viruses - 1; Other Eukaryotes - 106 (source: NCBI BLink). | chr1:19812292-19813194 FORWARD LENGTH=300	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04201	A	A1S	Potri.001G398100	Potri.001G398100(AS)	POPTR_0001s40860	sp|Q9LDA7|P2C39_ARATH	Probable protein phosphatase 2C 39 OS=Arabidopsis thaliana GN=At3g15260 PE=2 SV=1	AT3G15260.2	| Symbols: | Protein phosphatase 2C family protein | chr3:5138842-5140242 FORWARD LENGTH=289	LOC_Os07g32380.1	protein|protein phosphatase 2C, putative, expressed	IMGA|Medtr5g063940.1	hypothetical protein chr5 25819289-25822814 F EGN_Mt100125 20111014	NA	GO:0003824|catalytic activity GO:0004722|protein serine/threonine phosphatase activity	NA
pt2_04202	A	A1S	Potri.001G398200	Potri.001G398200(AS)	POPTR_0001s40870	sp|Q9S7A9|SPL4_ARATH	Squamosa promoter-binding-like protein 4 OS=Arabidopsis thaliana GN=SPL4 PE=1 SV=1	AT1G53160.1	| Symbols: SPL4 | squamosa promoter binding protein-like 4 | chr1:19806478-19807080 FORWARD LENGTH=174	LOC_Os07g32170.1	protein|OsSPL13 - SBP-box gene family member, expressed	IMGA|Medtr5g046670.1	Squamosa promoter binding protein chr5 20048386-20043614 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0010321|regulation of vegetative phase change	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_04203	R	R	NA	NA	POPTR_0001s40880	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04204	A	A1S	Potri.001G398400	Potri.001G398400(AS)	POPTR_0001s40890	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04205	A	A1S	Potri.001G398500	Potri.001G398500(AS)	POPTR_0001s40900	sp|Q9FN37|PSKR2_ARATH	Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1	AT5G53890.1	| Symbols: PSKR2, AtPSKR2 | phytosylfokine-alpha receptor 2 | chr5:21877235-21880345 FORWARD LENGTH=1036	LOC_Os07g01710.1	protein|phytosulfokine receptor precursor, putative, expressed	IMGA|contig_79827_1.1	Receptor-like kinase contig_79827 4333-168 H PREDN 20111014	GO:0006468|protein phosphorylation GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway GO:0009611|response to wounding	GO:0001653|peptide receptor activity GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_04206	C	C1S	Potri.001G398600	Potri.001G398600(CS)	sp|Q45223|HBD_BRAJA	3-hydroxybutyryl-CoA dehydrogenase OS=Bradyrhizobium japonicum (strain USDA 110) GN=hbdA PE=3 SV=1	AT3G15290.1	| Symbols: | 3-hydroxyacyl-CoA dehydrogenase family protein | chr3:5145054-5146613 FORWARD LENGTH=294	LOC_Os01g58380.1	protein|3-hydroxybutyryl-CoA dehydrogenase, putative, expressed	NA	NA	GO:0006631|fatty acid metabolic process GO:0006944|cellular membrane fusion GO:0009853|photorespiration GO:0046685|response to arsenic-containing substance GO:0048193|Golgi vesicle transport GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0003857|3-hydroxyacyl-CoA dehydrogenase activity GO:0008691|3-hydroxybutyryl-CoA dehydrogenase activity GO:0016491|oxidoreductase activity GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0050662|coenzyme binding GO:0070403|NAD+ binding	GO:0005737|cytoplasm GO:0005777|peroxisome
pt2_04207	A	A1S	Potri.001G398600	Potri.001G398600(AS)	POPTR_0001s40920	sp|Q45223|HBD_BRAJA	3-hydroxybutyryl-CoA dehydrogenase OS=Bradyrhizobium japonicum (strain USDA 110) GN=hbdA PE=3 SV=1	AT3G15290.1	| Symbols: | 3-hydroxyacyl-CoA dehydrogenase family protein | chr3:5145054-5146613 FORWARD LENGTH=294	LOC_Os01g58380.1	protein|3-hydroxybutyryl-CoA dehydrogenase, putative, expressed	NA	NA	GO:0006631|fatty acid metabolic process GO:0006944|cellular membrane fusion GO:0009853|photorespiration GO:0046685|response to arsenic-containing substance GO:0048193|Golgi vesicle transport GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0003857|3-hydroxyacyl-CoA dehydrogenase activity GO:0008691|3-hydroxybutyryl-CoA dehydrogenase activity GO:0016491|oxidoreductase activity GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0050662|coenzyme binding GO:0070403|NAD+ binding	GO:0005737|cytoplasm GO:0005777|peroxisome
pt2_04208	A	A1S	Potri.001G398700	Potri.001G398700(AS)	POPTR_0001s40930	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0005886|plasma membrane
pt2_04209	A	A1S	Potri.001G398800	Potri.001G398800(AS)	POPTR_0001s40940	sp|Q5JNJ5|ENL1_ORYSJ	Early nodulin-like protein 1 OS=Oryza sativa subsp. japonica GN=ENODL1 PE=1 SV=1	AT5G53870.1	| Symbols: ENODL1, AtENODL1 | early nodulin-like protein 1 | chr5:21870033-21871228 REVERSE LENGTH=370	LOC_Os01g54430.1	protein|plastocyanin-like domain containing protein, putative, expressed	IMGA|Medtr5g006040.1	Early nodulin-like protein chr5 502223-501280 F EGN_Mt100125 20111014	NA	GO:0005507|copper ion binding GO:0009055|electron carrier activity	GO:0005886|plasma membrane GO:0031225|anchored to membrane
pt2_04210	A	A1S	Potri.013G117400	Potri.013G117400(AS)	POPTR_0001s40950	sp|Q54BP6|EXOC3_DICDI	Exocyst complex component 3 OS=Dictyostelium discoideum GN=exoc3 PE=3 SV=1	AT1G71820.1	| Symbols: SEC6 | SEC6 | chr1:27010022-27016745 FORWARD LENGTH=752	LOC_Os02g51430.1	protein|SEC6, putative, expressed	NA	NA	GO:0009846|pollen germination GO:0009860|pollen tube growth	GO:0005515|protein binding	GO:0000145|exocyst GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_04211	A	A1S	Potri.001G398900	Potri.001G398900(AS)	POPTR_0001s40960	NA	NA	AT5G53860.2	| Symbols: emb2737 | embryo defective 2737 | chr5:21865353-21868576 FORWARD LENGTH=422	NA	NA	NA	NA	GO:0009793|embryo development ending in seed dormancy GO:0045036|protein targeting to chloroplast	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009941|chloroplast envelope
pt2_04212	C	C2S	Potri.011G118000	Potri.011G118000(CS) Potri.001G398900(CS)	NA	NA	AT5G53860.2	| Symbols: emb2737 | embryo defective 2737 | chr5:21865353-21868576 FORWARD LENGTH=422	NA	NA	NA	NA	GO:0009793|embryo development ending in seed dormancy GO:0045036|protein targeting to chloroplast	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009941|chloroplast envelope
pt2_04213	A	A1S	Potri.001G399000	Potri.001G399000(AS)	POPTR_0001s40980	sp|B9N1F9|MTBC_POPTR	Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 OS=Populus trichocarpa GN=POPTRDRAFT_827604 PE=3 SV=1	AT5G53850.2	| Symbols: | haloacid dehalogenase-like hydrolase family protein | chr5:21861155-21864817 REVERSE LENGTH=507	LOC_Os11g29370.1	protein|haloacid dehalogenase-like hydrolase family protein, putative, expressed	NA	NA	GO:0008152|metabolic process GO:0019509|L-methionine salvage from methylthioadenosine GO:0071267|L-methionine salvage	GO:0003824|catalytic activity GO:0008967|phosphoglycolate phosphatase activity GO:0016787|hydrolase activity GO:0043167|ion binding GO:0043874|acireductone synthase activity GO:0046872|metal ion binding	GO:0005737|cytoplasm GO:0005829|cytosol GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_04214	A	A1S	Potri.001G399100	Potri.001G399100(AS)	POPTR_0001s40990	NA	NA	AT1G28280.2	| Symbols: | VQ motif-containing protein | chr1:9886297-9887395 REVERSE LENGTH=243	LOC_Os01g54400.1	protein|VQ domain containing protein, putative, expressed	NA	NA	GO:0008150|biological_process GO:0010200|response to chitin	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_04215	A	A1S	Potri.001G399200	Potri.001G399200(AS)	POPTR_0001s41000	NA	NA	AT1G53130.1	| Symbols: GRI | Stigma-specific Stig1 family protein | chr1:19794947-19795453 REVERSE LENGTH=168	LOC_Os01g14540.1	protein|STIGL1 - Stigma-specific Stig1 family protein precursor, expressed	NA	NA	GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010193|response to ozone GO:0010942|positive regulation of cell death GO:0042742|defense response to bacterium GO:0048316|seed development GO:0080141|regulation of jasmonic acid biosynthetic process GO:0080142|regulation of salicylic acid biosynthetic process	NA	GO:0005576|extracellular region GO:0005615|extracellular space
pt2_04216	A	A2S	Potri.001G399400	Potri.001G399400(AS) Potri.011G119700(DS)	POPTR_0001s41010	NA	NA	AT4G27500.1	| Symbols: PPI1 | proton pump interactor 1 | chr4:13743614-13745900 FORWARD LENGTH=612	LOC_Os08g30060.1	protein|proton pump interactor, putative, expressed	NA	NA	GO:0006612|protein targeting to membrane GO:0006820|anion transport GO:0006862|nucleotide transport GO:0006888|ER to Golgi vesicle-mediated transport GO:0006944|cellular membrane fusion GO:0010155|regulation of proton transport GO:0010363|regulation of plant-type hypersensitive response GO:0015696|ammonium transport GO:0015802|basic amino acid transport GO:0043069|negative regulation of programmed cell death GO:0043090|amino acid import GO:0043269|regulation of ion transport	GO:0005515|protein binding	GO:0005737|cytoplasm GO:0005783|endoplasmic reticulum GO:0005789|endoplasmic reticulum membrane GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_04217	A	A1S	Potri.001G399500	Potri.001G399500(AS)	POPTR_0001s41020	sp|Q9EPL0|XYLT2_MOUSE	Xylosyltransferase 2 OS=Mus musculus GN=Xylt2 PE=2 SV=3	AT3G15350.2	| Symbols: | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein | chr3:5167250-5168882 FORWARD LENGTH=424	LOC_Os06g40060.1	protein|glycosyltransferase family protein, putative, expressed	IMGA|Medtr1g108280.1	Xylosyltransferase chr1 31817214-31813081 E EGN_Mt100125 20111014	GO:0016051|carbohydrate biosynthetic process	GO:0008375|acetylglucosaminyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups	GO:0005794|Golgi apparatus GO:0016020|membrane GO:0016021|integral to membrane
pt2_04218	A	A1S	Potri.001G399600	Potri.001G399600(AS)	POPTR_0001s41030	sp|Q9LJR3|SPA3_ARATH	Protein SPA1-RELATED 3 OS=Arabidopsis thaliana GN=SPA3 PE=1 SV=1	AT3G15354.1	| Symbols: SPA3 | SPA1-related 3 | chr3:5169327-5172480 REVERSE LENGTH=837	LOC_Os01g52640.3	protein|suppressor of phythchrome A, putative, expressed	IMGA|Medtr5g085250.1	E3 ubiquitin-protein ligase COP1 chr5 35784611-35795521 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004871|signal transducer activity GO:0005515|protein binding GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0042802|identical protein binding	GO:0005634|nucleus GO:0005834|heterotrimeric G-protein complex GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_04219	A	A1S	Potri.001G399600	Potri.001G399600(AS)	POPTR_0001s41030	sp|Q9LJR3|SPA3_ARATH	Protein SPA1-RELATED 3 OS=Arabidopsis thaliana GN=SPA3 PE=1 SV=1	AT3G15354.1	| Symbols: SPA3 | SPA1-related 3 | chr3:5169327-5172480 REVERSE LENGTH=837	LOC_Os01g52640.3	protein|suppressor of phythchrome A, putative, expressed	IMGA|Medtr5g085250.1	E3 ubiquitin-protein ligase COP1 chr5 35784611-35795521 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004871|signal transducer activity GO:0005515|protein binding GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0042802|identical protein binding	GO:0005634|nucleus GO:0005834|heterotrimeric G-protein complex GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_04220	C	C1S	Potri.001G399600	Potri.001G399600(CS)	sp|Q9LJR3|SPA3_ARATH	Protein SPA1-RELATED 3 OS=Arabidopsis thaliana GN=SPA3 PE=1 SV=1	AT3G15354.1	| Symbols: SPA3 | SPA1-related 3 | chr3:5169327-5172480 REVERSE LENGTH=837	LOC_Os01g52640.3	protein|suppressor of phythchrome A, putative, expressed	IMGA|Medtr5g085250.1	E3 ubiquitin-protein ligase COP1 chr5 35784611-35795521 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004871|signal transducer activity GO:0005515|protein binding GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0042802|identical protein binding	GO:0005634|nucleus GO:0005834|heterotrimeric G-protein complex GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_04221	G	G1	NA	NA	POPTR_0001s41035	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04222	A	A1S	Potri.001G399700	Potri.001G399700(AS)	POPTR_0001s41040	sp|Q9ZVM9|Y1461_ARATH	Probable serine/threonine-protein kinase At1g54610 OS=Arabidopsis thaliana GN=At1g54610 PE=1 SV=1	AT1G53050.1	| Symbols: | Protein kinase superfamily protein | chr1:19772574-19775531 FORWARD LENGTH=694	LOC_Os01g10430.1	protein|protein kinase family protein, putative, expressed	IMGA|Medtr5g008860.1	hypothetical protein chr5 1727811-1731359 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006499|N-terminal protein myristoylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_04223	A	A2S	Potri.001G399800	Potri.001G399800(AS) Potri.011G119300(DS)	POPTR_0001s41050	NA	NA	AT1G53040.2	| Symbols: | Protein of unknown function (DUF616) | chr1:19764567-19766870 REVERSE LENGTH=540	LOC_Os01g19870.1	protein|hydrolase, acting on carbon-nitrogen, putative, expressed	IMGA|contig_60680_1.1	Unknown protein contig_60680 1994-984 E PREDN 20111014	GO:0006672|ceramide metabolic process GO:0008150|biological_process	GO:0016757|transferase activity, transferring glycosyl groups	GO:0005575|cellular_component GO:0005739|mitochondrion GO:0016021|integral to membrane
pt2_04224	A	A2S	Potri.001G399900	Potri.001G399900(AS) Potri.011G119200(DS)	POPTR_0001s41060	NA	NA	AT1G53035.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15358.1); Has 49 Blast hits to 49 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:19761866-19762318 REVERSE LENGTH=150	NA	NA	NA	NA	GO:0007623|circadian rhythm GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_04225	A	A1S	Potri.001G400000	Potri.001G400000(AS)	POPTR_0001s41070	sp|Q54ID0|COX17_DICDI	Cytochrome c oxidase copper chaperone OS=Dictyostelium discoideum GN=cox17 PE=3 SV=1	AT3G15352.1	| Symbols: ATCOX17, COX17 | cytochrome c oxidase 17 | chr3:5180266-5180490 FORWARD LENGTH=74	LOC_Os02g55134.1	protein|cytochrome c oxidase copper chaperone, putative, expressed	NA	NA	GO:0006626|protein targeting to mitochondrion GO:0006825|copper ion transport GO:0009617|response to bacterium GO:0046688|response to copper ion	GO:0005507|copper ion binding GO:0016531|copper chaperone activity	GO:0009507|chloroplast
pt2_04226	A	A2S	Potri.001G400200	Potri.001G400200(AS) Potri.001G400100(AA)	POPTR_0001s41080	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04227	A	A1S	Potri.001G400300	Potri.001G400300(AS)	POPTR_0001s41090	sp|Q9LUQ5|UBC25_ARATH	Probable ubiquitin-conjugating enzyme E2 25 OS=Arabidopsis thaliana GN=UBC25 PE=2 SV=1	AT3G15355.1	| Symbols: UBC25, PFU1 | ubiquitin-conjugating enzyme 25 | chr3:5183858-5186669 FORWARD LENGTH=609	LOC_Os05g48380.1	protein|ubiquitin-conjugating enzyme domain containing protein, expressed	IMGA|Medtr1g092490.1	Ubiquitin-conjugating enzyme E2-230k chr1 25744170-25746205 E EGN_Mt100125 20111014	NA	GO:0016881|acid-amino acid ligase activity	GO:0005634|nucleus
pt2_04228	B	B1S	Potri.001G400400	Potri.001G400400(BS)	POPTR_0001s41100	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04229	A	A1S	Potri.001G400500	Potri.001G400500(AS)	POPTR_0001s41110	sp|Q9C9H7|RLP12_ARATH	Receptor-like protein 12 OS=Arabidopsis thaliana GN=RLP12 PE=2 SV=2	AT1G45616.1	| Symbols: AtRLP6, RLP6 | receptor like protein 6 | chr1:17183550-17186534 REVERSE LENGTH=994	LOC_Os01g06520.1	protein|verticillium wilt disease resistance protein, putative, expressed	IMGA|Medtr5g063740.1	Receptor-like kinase-like protein chr5 25729319-25726307 E EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0006355|regulation of transcription, DNA-dependent GO:0006457|protein folding GO:0006612|protein targeting to membrane GO:0006952|defense response GO:0007165|signal transduction GO:0009408|response to heat GO:0009617|response to bacterium GO:0009644|response to high light intensity GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0031348|negative regulation of defense response GO:0034976|response to endoplasmic reticulum stress GO:0035304|regulation of protein dephosphorylation GO:0042542|response to hydrogen peroxide	GO:0016301|kinase activity	GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_04230	A	A1S	Potri.001G400600	Potri.001G400600(AS)	POPTR_0001s41120	NA	NA	AT2G20650.2	| Symbols: | RING/U-box superfamily protein | chr2:8903954-8907017 REVERSE LENGTH=559	LOC_Os09g37050.1	protein|RING-H2 finger protein ATL2B, putative, expressed	IMGA|Medtr1g043410.1	RING finger protein chr1 12570584-12571549 H EGN_Mt100125 20111014	NA	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_04231	A	A1S	Potri.001G400700	Potri.001G400700(AS)	POPTR_0001s41130	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04232	A	A1S	Potri.001G400800	Potri.001G400800(AS)	POPTR_0001s41140	sp|Q8NDF8|PAPD5_HUMAN	PAP-associated domain-containing protein 5 OS=Homo sapiens GN=PAPD5 PE=1 SV=2	AT5G53770.1	| Symbols: | Nucleotidyltransferase family protein | chr5:21826733-21829858 FORWARD LENGTH=530	LOC_Os01g48210.1	protein|PAP/25A associated domain containing protein, putative, expressed	NA	NA	GO:0006312|mitotic recombination GO:0009560|embryo sac egg cell differentiation GO:0009688|abscisic acid biosynthetic process	GO:0003676|nucleic acid binding GO:0016779|nucleotidyltransferase activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04233	A	A1S	Potri.001G400900	Potri.001G400900(AS)	POPTR_0001s41150	sp|Q6MD00|KDSB_PARUW	3-deoxy-manno-octulosonate cytidylyltransferase OS=Protochlamydia amoebophila (strain UWE25) GN=kdsB PE=3 SV=1	AT1G53000.1	| Symbols: KDSB | Nucleotide-diphospho-sugar transferases superfamily protein | chr1:19745330-19747133 REVERSE LENGTH=290	LOC_Os05g48750.1	protein|3-deoxy-manno-octulosonate cytidylyltransferase, putative, expressed	NA	NA	GO:0009103|lipopolysaccharide biosynthetic process GO:0009555|pollen development GO:0009860|pollen tube growth GO:0019243|methylglyoxal catabolic process to D-lactate GO:0033468|CMP-keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	GO:0008690|3-deoxy-manno-octulosonate cytidylyltransferase activity GO:0016779|nucleotidyltransferase activity	GO:0005739|mitochondrion GO:0031307|integral to mitochondrial outer membrane
pt2_04234	A	A1S	Potri.001G401000	Potri.001G401000(AS)	POPTR_0001s41155	sp|Q9FJD5|LAC17_ARATH	Laccase-17 OS=Arabidopsis thaliana GN=LAC17 PE=2 SV=1	AT5G60020.1	| Symbols: LAC17, ATLAC17 | laccase 17 | chr5:24168072-24170223 FORWARD LENGTH=577	LOC_Os01g62490.1	protein|laccase precursor protein, putative, expressed	IMGA|Medtr5g020600.1	Laccase-11 chr5 7633298-7636466 E EGN_Mt100125 20111014	GO:0009698|phenylpropanoid metabolic process GO:0009809|lignin biosynthetic process GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process GO:0046274|lignin catabolic process GO:0055114|oxidation-reduction process	GO:0005507|copper ion binding GO:0016491|oxidoreductase activity GO:0052716|hydroquinone:oxygen oxidoreductase activity	GO:0005576|extracellular region GO:0048046|apoplast
pt2_04235	A	A2S	Potri.001G401100	Potri.001G401100(AS) Potri.001G054600(DS)	POPTR_0001s41160	sp|Q9FJD5|LAC17_ARATH	Laccase-17 OS=Arabidopsis thaliana GN=LAC17 PE=2 SV=1	AT5G60020.1	| Symbols: LAC17, ATLAC17 | laccase 17 | chr5:24168072-24170223 FORWARD LENGTH=577	LOC_Os01g62480.1	protein|laccase precursor protein, putative, expressed	IMGA|Medtr5g020600.1	Laccase-11 chr5 7633298-7636466 E EGN_Mt100125 20111014	GO:0009698|phenylpropanoid metabolic process GO:0009809|lignin biosynthetic process GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process GO:0046274|lignin catabolic process GO:0055114|oxidation-reduction process	GO:0005507|copper ion binding GO:0016491|oxidoreductase activity GO:0052716|hydroquinone:oxygen oxidoreductase activity	GO:0005576|extracellular region GO:0048046|apoplast
pt2_04236	A	A1S	Potri.001G401300	Potri.001G401300(AS)	POPTR_0001s41170	sp|Q9FJD5|LAC17_ARATH	Laccase-17 OS=Arabidopsis thaliana GN=LAC17 PE=2 SV=1	AT5G60020.1	| Symbols: LAC17, ATLAC17 | laccase 17 | chr5:24168072-24170223 FORWARD LENGTH=577	LOC_Os01g62480.1	protein|laccase precursor protein, putative, expressed	IMGA|Medtr5g020600.1	Laccase-11 chr5 7633298-7636466 E EGN_Mt100125 20111014	GO:0009698|phenylpropanoid metabolic process GO:0009809|lignin biosynthetic process GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process GO:0046274|lignin catabolic process GO:0055114|oxidation-reduction process	GO:0005507|copper ion binding GO:0016491|oxidoreductase activity GO:0052716|hydroquinone:oxygen oxidoreductase activity	GO:0005576|extracellular region GO:0048046|apoplast
pt2_04237	A	A1S	Potri.001G401400	Potri.001G401400(AS)	POPTR_0001s41180	sp|O94111|DYL1_EMENI	Dynein light chain, cytoplasmic OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=nudG PE=3 SV=1	AT1G23220.1	| Symbols: | Dynein light chain type 1 family protein | chr1:8242614-8244136 FORWARD LENGTH=129	LOC_Os04g38880.1	protein|dynein light chain type 1 domain containing protein, expressed	NA	NA	NA	GO:0003777|microtubule motor activity	GO:0005737|cytoplasm GO:0005875|microtubule associated complex
pt2_04238	A	A1S	Potri.001G401500	Potri.001G401500(AS)	POPTR_0001s41190	sp|Q9SEU6|TRXM4_ARATH	Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana GN=At3g15360 PE=1 SV=2	AT3G15360.1	| Symbols: ATHM4, TRX-M4, ATM4 | thioredoxin M-type 4 | chr3:5188448-5189457 FORWARD LENGTH=193	LOC_Os02g42700.1	protein|thioredoxin, putative, expressed	IMGA|contig_166756_1.1	Thioredoxin contig_166756 470-157 F PREDN 20111014	GO:0000023|maltose metabolic process GO:0006098|pentose-phosphate shunt GO:0006109|regulation of carbohydrate metabolic process GO:0006569|tryptophan catabolic process GO:0006662|glycerol ether metabolic process GO:0006979|response to oxidative stress GO:0009684|indoleacetic acid biosynthetic process GO:0009853|photorespiration GO:0010027|thylakoid membrane organization GO:0019252|starch biosynthetic process GO:0043085|positive regulation of catalytic activity GO:0043086|negative regulation of catalytic activity GO:0045454|cell redox homeostasis	GO:0004857|enzyme inhibitor activity GO:0008047|enzyme activator activity GO:0009055|electron carrier activity GO:0015035|protein disulfide oxidoreductase activity	GO:0005618|cell wall GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009570|chloroplast stroma GO:0009579|thylakoid GO:0009941|chloroplast envelope
pt2_04239	A	A1S	Potri.001G401500	Potri.001G401500(AS)	POPTR_0001s41190	sp|Q9SEU6|TRXM4_ARATH	Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana GN=At3g15360 PE=1 SV=2	AT3G15360.1	| Symbols: ATHM4, TRX-M4, ATM4 | thioredoxin M-type 4 | chr3:5188448-5189457 FORWARD LENGTH=193	LOC_Os02g42700.1	protein|thioredoxin, putative, expressed	IMGA|contig_166756_1.1	Thioredoxin contig_166756 470-157 F PREDN 20111014	GO:0000023|maltose metabolic process GO:0006098|pentose-phosphate shunt GO:0006109|regulation of carbohydrate metabolic process GO:0006569|tryptophan catabolic process GO:0006662|glycerol ether metabolic process GO:0006979|response to oxidative stress GO:0009684|indoleacetic acid biosynthetic process GO:0009853|photorespiration GO:0010027|thylakoid membrane organization GO:0019252|starch biosynthetic process GO:0043085|positive regulation of catalytic activity GO:0043086|negative regulation of catalytic activity GO:0045454|cell redox homeostasis	GO:0004857|enzyme inhibitor activity GO:0008047|enzyme activator activity GO:0009055|electron carrier activity GO:0015035|protein disulfide oxidoreductase activity	GO:0005618|cell wall GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009570|chloroplast stroma GO:0009579|thylakoid GO:0009941|chloroplast envelope
pt2_04240	A	A1S	Potri.001G401600	Potri.001G401600(AS)	POPTR_0001s41200	sp|Q8GUK7|RMA3_ARATH	E3 ubiquitin-protein ligase RMA3 OS=Arabidopsis thaliana GN=RMA3 PE=1 SV=1	AT4G27470.1	| Symbols: ATRMA3, RMA3 | RING membrane-anchor 3 | chr4:13735576-13736307 FORWARD LENGTH=243	LOC_Os04g44820.1	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|contig_125603_1.1	RING finger protein contig_125603 3129-2481 E PREDN 20111014	NA	GO:0004842|ubiquitin-protein ligase activity GO:0008270|zinc ion binding	GO:0005634|nucleus GO:0005783|endoplasmic reticulum
pt2_04241	A	A1S	Potri.001G401700	Potri.001G401700(AS)	POPTR_0001s41210	sp|Q9LDJ3|EXP12_ARATH	Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1	AT3G15370.1	| Symbols: ATEXPA12, EXP12, ATEXP12, ATHEXP ALPHA 1.24, EXPA12 | expansin 12 | chr3:5190649-5191982 FORWARD LENGTH=252	LOC_Os03g06020.1	protein|expansin precursor, putative, expressed	IMGA|Medtr5g075320.1	Expansin chr5 31001917-31000125 H EGN_Mt100125 20111014	GO:0009664|plant-type cell wall organization GO:0009826|unidimensional cell growth GO:0009828|plant-type cell wall loosening	NA	GO:0005576|extracellular region
pt2_04242	A	A1S	Potri.001G401900	Potri.001G401900(AS)	POPTR_0001s41220	NA	NA	AT3G15390.1	| Symbols: SDE5 | silencing defective 5 | chr3:5196689-5199531 REVERSE LENGTH=490	LOC_Os02g42670.1	protein|DUF1771 domain containing protein, putative, expressed	NA	NA	GO:0010267|production of ta-siRNAs involved in RNA interference	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus GO:0009507|chloroplast
pt2_04243	A	A1S	Potri.001G402000	Potri.001G402000(AS)	POPTR_0001s41230	NA	NA	AT3G15395.4	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 31 Blast hits to 31 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:5201014-5201307 FORWARD LENGTH=59	LOC_Os02g10370.1	protein|hrpN-interacting protein from Malus, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_04244	A	A1S	Potri.001G402100	Potri.001G402100(AS)	POPTR_0001s41240	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04245	A	A18S	Potri.001G402200	Potri.001G402200(AS) Potri.005G153700(DS) Potri.T098000(DS) Potri.001G393500(DS) Potri.017G072700(DS) Potri.001G297800(DS) Potri.001G256500(DS) Potri.018G075600(DS) Potri.011G094000(DS) Potri.002G200700(DS) Potri.014G026000(DS) Potri.003G006700(DS) Potri.012G066500(DS) Potri.005G163200(DS) Potri.001G182200(DS) Potri.017G062600(DS) Potri.001G238000(DS) Potri.001G278700(DS)	POPTR_0001s41250	NA	NA	AT5G05800.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 881 Blast hits to 512 proteins in 30 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 38; Plants - 833; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). | chr5:1743234-1744751 REVERSE LENGTH=449	LOC_Os12g10550.1	protein|transposon protein, putative, CACTA, En/Spm sub-class, expressed	IMGA|Medtr5g054570.1	PIF-like protein chr5 21936286-21937344 H EGN_Mt100125 20111014	GO:0008150|biological_process GO:0048573|photoperiodism, flowering	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_04246	D	D3S	Potri.003G006600	Potri.003G006600(DS) Potri.014G092000(DS) Potri.018G075700(DS)	POPTR_0001s41260	NA	NA	AT5G41980.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:16793765-16794889 FORWARD LENGTH=374	LOC_Os06g38920.1	protein|transposon protein, putative, CACTA, En/Spm sub-class, expressed	IMGA|Medtr1g059320.1	hypothetical protein chr1 15361664-15360985 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04247	A	A1S	Potri.001G402300	Potri.001G402300(AS)	POPTR_0001s41270	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04248	A	A1S	Potri.001G402400	Potri.001G402400(AS)	POPTR_0001s41280	sp|Q9FI00|MLO11_ARATH	MLO-like protein 11 OS=Arabidopsis thaliana GN=MLO11 PE=2 SV=1	AT5G53760.2	| Symbols: MLO11, ATMLO11 | Seven transmembrane MLO family protein | chr5:21823055-21826289 FORWARD LENGTH=573	LOC_Os11g07912.1	protein|MLO domain containing protein, putative, expressed	IMGA|Medtr5g022400.1	MLO-like protein chr5 8568829-8572319 E EGN_Mt100125 20111014	GO:0006952|defense response GO:0008219|cell death	GO:0005516|calmodulin binding	GO:0005634|nucleus GO:0005886|plasma membrane GO:0016021|integral to membrane
pt2_04249	A	A1S	Potri.001G402500	Potri.001G402500(AS)	POPTR_0001s41290	sp|Q99LH1|NOG2_MOUSE	Nucleolar GTP-binding protein 2 OS=Mus musculus GN=Gnl2 PE=2 SV=2	AT1G52980.1	| Symbols: | GTP-binding family protein | chr1:19737493-19740201 FORWARD LENGTH=576	LOC_Os03g22890.1	protein|GTPase of unknown function domain containing protein, putative, expressed	IMGA|Medtr5g010400.1	Nucleolar GTP-binding protein chr5 2535219-2535747 H EGN_Mt100125 20111014	NA	GO:0003924|GTPase activity GO:0005525|GTP binding	GO:0005634|nucleus
pt2_04250	A	A1S	Potri.001G402600	Potri.001G402600(AS)	POPTR_0001s41300	sp|Q09151|GLUA3_ORYSJ	Glutelin type-A 3 OS=Oryza sativa subsp. japonica GN=GLUA3 PE=2 SV=2	AT1G07750.1	| Symbols: | RmlC-like cupins superfamily protein | chr1:2404300-2405863 REVERSE LENGTH=356	LOC_Os01g74480.1	protein|cupin domain containing protein, expressed	IMGA|Medtr5g022720.1	Glutelin type-A chr5 8730185-8728206 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0005507|copper ion binding GO:0008270|zinc ion binding GO:0045735|nutrient reservoir activity	GO:0005794|Golgi apparatus GO:0005829|cytosol GO:0009506|plasmodesma
pt2_04251	A	A1S	Potri.001G402700	Potri.001G402700(AS)	POPTR_0001s41310	NA	NA	AT3G15420.1	| Symbols: | Transcription factor TFIIIC, tau55-related protein | chr3:5207704-5208289 REVERSE LENGTH=107	LOC_Os04g44770.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_04252	A	A1S	Potri.001G402800	Potri.001G402800(AS)	POPTR_0001s41320	sp|Q15034|HERC3_HUMAN	Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3 PE=1 SV=1	AT3G15430.2	| Symbols: | Regulator of chromosome condensation (RCC1) family protein | chr3:5209408-5211562 FORWARD LENGTH=488	LOC_Os07g27490.1	protein|Regulator of chromosome condensation domain containing protein, expressed	IMGA|Medtr5g089900.1	Lateral signaling target protein-like protein chr5 38066312-38075364 E EGN_Mt100125 20111014	GO:0006486|protein glycosylation GO:0008150|biological_process	GO:0008536|Ran GTPase binding	GO:0005575|cellular_component
pt2_04253	A	A1S	Potri.001G402900	Potri.001G402900(AS)	POPTR_0001s41330	sp|Q84WQ5|CBSX5_ARATH	CBS domain-containing protein CBSX5 OS=Arabidopsis thaliana GN=CBSX5 PE=2 SV=2	AT4G27460.1	| Symbols: | Cystathionine beta-synthase (CBS) family protein | chr4:13732939-13734263 FORWARD LENGTH=391	LOC_Os10g35630.1	protein|cystathionin beta synthase protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_04254	A	A1S	Potri.001G403000	Potri.001G403000(AS)	POPTR_0001s41340	sp|P24805|TSJT1_TOBAC	Stem-specific protein TSJT1 OS=Nicotiana tabacum GN=TSJT1 PE=2 SV=1	AT4G27450.1	| Symbols: | Aluminium induced protein with YGL and LRDR motifs | chr4:13727665-13728683 REVERSE LENGTH=250	LOC_Os04g58280.2	protein|stem-specific protein TSJT1, putative, expressed	NA	NA	GO:0001666|response to hypoxia GO:0008150|biological_process GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0010310|regulation of hydrogen peroxide metabolic process	GO:0005515|protein binding	GO:0005634|nucleus GO:0005829|cytosol GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_04255	A	A1S	Potri.001G403100	Potri.001G403100(AS)	POPTR_0001s41350	sp|Q8UVY2|BRX1_XENLA	Ribosome biogenesis protein BRX1 homolog OS=Xenopus laevis GN=brix1 PE=2 SV=1	AT3G15460.1	| Symbols: | Ribosomal RNA processing Brix domain protein | chr3:5214279-5216188 REVERSE LENGTH=315	LOC_Os02g37870.1	protein|Brix domain containing protein, putative, expressed	NA	NA	GO:0001510|RNA methylation GO:0008150|biological_process GO:0009220|pyrimidine ribonucleotide biosynthetic process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_04256	A	A1S	Potri.001G403100	Potri.001G403100(AS)	POPTR_0001s41350	sp|Q8UVY2|BRX1_XENLA	Ribosome biogenesis protein BRX1 homolog OS=Xenopus laevis GN=brix1 PE=2 SV=1	AT3G15460.1	| Symbols: | Ribosomal RNA processing Brix domain protein | chr3:5214279-5216188 REVERSE LENGTH=315	LOC_Os02g37870.1	protein|Brix domain containing protein, putative, expressed	NA	NA	GO:0001510|RNA methylation GO:0008150|biological_process GO:0009220|pyrimidine ribonucleotide biosynthetic process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_04257	A	A1S	Potri.001G403200	Potri.001G403200(AS)	POPTR_0001s41360	sp|Q9JJK2|LANC2_MOUSE	LanC-like protein 2 OS=Mus musculus GN=Lancl2 PE=1 SV=1	AT1G52920.1	| Symbols: GCR2, GPCR | G protein coupled receptor | chr1:19709360-19711048 REVERSE LENGTH=410	LOC_Os10g35480.2	protein|lanC-like protein 2, putative, expressed	NA	NA	GO:0009787|regulation of abscisic acid mediated signaling pathway GO:0010231|maintenance of seed dormancy	GO:0003824|catalytic activity GO:0010427|abscisic acid binding	GO:0005634|nucleus GO:0005886|plasma membrane GO:0019898|extrinsic to membrane
pt2_04258	A	A1S	Potri.001G403300	Potri.001G403300(AS)	POPTR_0001s41370	sp|Q41249|PORA_CUCSA	Protochlorophyllide reductase, chloroplastic OS=Cucumis sativus GN=PORA PE=2 SV=1	AT5G54190.1	| Symbols: PORA | protochlorophyllide oxidoreductase A | chr5:21991183-21992773 REVERSE LENGTH=405	LOC_Os10g35370.1	protein|oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed	NA	NA	GO:0008152|metabolic process GO:0009723|response to ethylene stimulus GO:0015995|chlorophyll biosynthetic process GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0016491|oxidoreductase activity GO:0016630|protochlorophyllide reductase activity	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009941|chloroplast envelope
pt2_04259	A	A1S	Potri.001G403400	Potri.001G403400(AS)	POPTR_0001s41390	sp|Q498F0|WDR44_XENLA	WD repeat-containing protein 44 OS=Xenopus laevis GN=wdr44 PE=2 SV=1	AT3G15470.1	| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr3:5216630-5219868 REVERSE LENGTH=883	LOC_Os02g42590.1	protein|WD-40 repeat family protein, putative, expressed	NA	NA	GO:0007165|signal transduction	GO:0004871|signal transducer activity	GO:0005737|cytoplasm GO:0005834|heterotrimeric G-protein complex
pt2_04260	A	A1S	Potri.001G403500	Potri.001G403500(AS)	POPTR_0001s41400	NA	NA	AT3G15480.1	| Symbols: | Protein of unknown function (DUF1218) | chr3:5226489-5227666 REVERSE LENGTH=175	LOC_Os09g10910.3	protein|fiber protein Fb34, putative, expressed	IMGA|Medtr5g057670.1	COSII chr5 23142583-23138532 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005576|extracellular region GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_04261	A	A1S	Potri.001G403600	Potri.001G403600(AS)	POPTR_0001s41410	NA	NA	AT4G27435.1	| Symbols: | Protein of unknown function (DUF1218) | chr4:13723903-13724872 FORWARD LENGTH=173	LOC_Os07g27810.1	protein|fiber protein Fb34, putative, expressed	IMGA|Medtr5g057670.1	COSII chr5 23142583-23138532 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005576|extracellular region GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_04262	A	A1S	Potri.001G403700	Potri.001G403700(AS)	POPTR_0001s41420	NA	NA	AT4G27430.2	| Symbols: CIP7 | COP1-interacting protein 7 | chr4:13718817-13722736 FORWARD LENGTH=1058	LOC_Os03g64320.1	protein|expressed protein	NA	NA	GO:0009416|response to light stimulus GO:0009718|anthocyanin-containing compound biosynthetic process GO:0015995|chlorophyll biosynthetic process GO:0016117|carotenoid biosynthetic process GO:0045893|positive regulation of transcription, DNA-dependent	NA	GO:0005634|nucleus GO:0005794|Golgi apparatus GO:0005886|plasma membrane
pt2_04263	A	A1S	Potri.001G403800	Potri.001G403800(AS)	POPTR_0001s41430	sp|Q40392|TMVRN_NICGU	TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1	AT1G52900.1	| Symbols: | Toll-Interleukin-Resistance (TIR) domain family protein | chr1:19702211-19702916 REVERSE LENGTH=199	LOC_Os07g37950.1	protein|expressed protein	IMGA|Medtr5g036180.1	Tir-nbs resistance protein chr5 15349189-15351542 F EGN_Mt100125 20111014	GO:0006952|defense response GO:0007165|signal transduction	NA	GO:0005622|intracellular GO:0005737|cytoplasm
pt2_04264	A	A1S	Potri.001G403900	Potri.001G403900(AS)	POPTR_0001s41440	sp|Q7XSK0|BGL18_ORYSJ	Beta-glucosidase 18 OS=Oryza sativa subsp. japonica GN=BGLU18 PE=2 SV=2	AT1G61810.3	| Symbols: BGLU45 | beta-glucosidase 45 | chr1:22830035-22834684 FORWARD LENGTH=543	LOC_Os04g43410.1	protein|Os4bglu18 - monolignol beta-glucoside homologue, expressed	IMGA|Medtr1g024230.1	Beta-glucosidase D2 chr1 7720326-7726000 E EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0009809|lignin biosynthetic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0008422|beta-glucosidase activity GO:0043169|cation binding GO:0047782|coniferin beta-glucosidase activity	GO:0005576|extracellular region
pt2_04265	B	B1S	Potri.001G404000	Potri.001G404000(BS)	POPTR_0001s41450	sp|Q9SZR9|AB9G_ARATH	ABC transporter G family member 9 OS=Arabidopsis thaliana GN=ABCG9 PE=2 SV=2	AT4G27420.1	| Symbols: | ABC-2 type transporter family protein | chr4:13712434-13714797 REVERSE LENGTH=638	LOC_Os08g07010.1	protein|ABC-2 type transporter domain containing protein, expressed	IMGA|Medtr5g025470.1	ABC transporter-like protein chr5 10080322-10082815 E EGN_Mt100125 20111014	NA	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0016020|membrane
pt2_04266	A	A1S	Potri.001G404100	Potri.001G404100(AS)	POPTR_0001s41460	sp|Q93VY3|NAC72_ARATH	NAC domain-containing protein 72 OS=Arabidopsis thaliana GN=NAC072 PE=2 SV=1	AT4G27410.2	| Symbols: RD26, ANAC072 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein | chr4:13707928-13709013 REVERSE LENGTH=297	LOC_Os01g60020.1	protein|NAC domain transcription factor, putative, expressed	IMGA|Medtr5g041940.1	NAC domain protein chr5 18013715-18012368 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0007165|signal transduction GO:0007275|multicellular organismal development GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009611|response to wounding GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009753|response to jasmonic acid stimulus GO:0042538|hyperosmotic salinity response GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_04267	C	C1S	Potri.001G404200	Potri.001G404200(CS)	NA	NA	NA	NA	LOC_Os03g33100.1	protein|retrotransposon protein, putative, unclassified, expressed	NA	NA	NA	NA	NA
pt2_04268	A	A1S	Potri.001G404300	Potri.001G404300(AS)	POPTR_0001s41480	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04269	A	A1S	Potri.001G404400	Potri.001G404400(AS)	POPTR_0001s41490	sp|Q9ZNU2|NAC18_ARATH	NAC domain-containing protein 18 OS=Arabidopsis thaliana GN=NAC018 PE=2 SV=1	AT3G15510.1	| Symbols: ATNAC2, ANAC056, NARS1, NAC2 | NAC domain containing protein 2 | chr3:5243696-5245037 FORWARD LENGTH=364	LOC_Os07g37920.1	protein|no apical meristem protein, putative, expressed	IMGA|Medtr5g041940.1	NAC domain protein chr5 18013715-18012368 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0007275|multicellular organismal development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04270	A	A1S	Potri.001G404500	Potri.001G404500(AS)	POPTR_0001s41500	NA	NA	AT3G15518.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr3:5249221-5249541 FORWARD LENGTH=106	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_04271	A	A1S	Potri.001G404600	Potri.001G404600(AS)	POPTR_0001s41510	sp|Q2KIY1|PXMP2_BOVIN	Peroxisomal membrane protein 2 OS=Bos taurus GN=PXMP2 PE=2 SV=3	AT1G52870.2	| Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein | chr1:19685856-19687678 FORWARD LENGTH=366	LOC_Os03g38730.1	protein|peroxisomal membrane protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0016021|integral to membrane
pt2_04272	A	A1S	Potri.001G404700	Potri.001G404700(AS)	POPTR_0001s41530	sp|P82869|CYP37_ARATH	Peptidyl-prolyl cis-trans isomerase CYP37, chloroplastic OS=Arabidopsis thaliana GN=CYP37 PE=1 SV=3	AT3G15520.1	| Symbols: | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein | chr3:5249739-5252432 REVERSE LENGTH=466	LOC_Os07g37830.2	protein|peptidyl-prolyl cis-trans isomerase CYP37, chloroplast precursor, putative, expressed	IMGA|contig_80595_1.1	Peptidyl-prolyl cis-trans isomerase cyclophilin-type contig_80595 961-3457 E PREDN 20111014	GO:0006457|protein folding GO:0010103|stomatal complex morphogenesis GO:0016556|mRNA modification GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway	GO:0003755|peptidyl-prolyl cis-trans isomerase activity	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009543|chloroplast thylakoid lumen GO:0009579|thylakoid GO:0031977|thylakoid lumen
pt2_04273	A	A2S	Potri.001G404800	Potri.001G404800(AS) Potri.001G405100(BS)	POPTR_0001s41540	sp|O81825|DRL28_ARATH	Probable disease resistance protein At4g27220 OS=Arabidopsis thaliana GN=At4g27220 PE=2 SV=1	AT4G27220.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr4:13633953-13636712 REVERSE LENGTH=919	LOC_Os01g57870.1	protein|disease resistance protein RPS2, putative, expressed	IMGA|Medtr5g092190.1	Cc-nbs-lrr resistance protein chr5 39226547-39217532 E EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0006952|defense response	GO:0000166|nucleotide binding GO:0017111|nucleoside-triphosphatase activity GO:0043531|ADP binding	NA
pt2_04274	A	A1S	Potri.001G404900	Potri.001G404900(AS)	POPTR_0001s41550	sp|O81825|DRL28_ARATH	Probable disease resistance protein At4g27220 OS=Arabidopsis thaliana GN=At4g27220 PE=2 SV=1	AT4G27220.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr4:13633953-13636712 REVERSE LENGTH=919	LOC_Os01g57870.1	protein|disease resistance protein RPS2, putative, expressed	IMGA|Medtr5g092190.1	Cc-nbs-lrr resistance protein chr5 39226547-39217532 E EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0006952|defense response	GO:0000166|nucleotide binding GO:0017111|nucleoside-triphosphatase activity GO:0043531|ADP binding	NA
pt2_04275	A	A1S	Potri.001G405000	Potri.001G405000(AS)	POPTR_0001s41560	sp|Q940K0|DRL15_ARATH	Probable disease resistance protein At1g61180 OS=Arabidopsis thaliana GN=At1g61180 PE=2 SV=2	AT1G61180.2	| Symbols: | LRR and NB-ARC domains-containing disease resistance protein | chr1:22551486-22554185 FORWARD LENGTH=899	LOC_Os01g72680.1	protein|disease resistance protein RPS2, putative, expressed	IMGA|contig_68675_1.1	Cc-nbs-lrr resistance protein contig_68675 153-3780 H PREDN 20111014	GO:0006499|N-terminal protein myristoylation GO:0006952|defense response	GO:0043531|ADP binding	GO:0005886|plasma membrane
pt2_04276	A	A3S	Potri.001G405100	Potri.001G405100(AS) Potri.001G404900(DS) Potri.001G404800(DS)	POPTR_0001s41570	sp|O81825|DRL28_ARATH	Probable disease resistance protein At4g27220 OS=Arabidopsis thaliana GN=At4g27220 PE=2 SV=1	AT4G27220.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr4:13633953-13636712 REVERSE LENGTH=919	LOC_Os01g57870.1	protein|disease resistance protein RPS2, putative, expressed	IMGA|Medtr5g092190.1	Cc-nbs-lrr resistance protein chr5 39226547-39217532 E EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0006952|defense response	GO:0000166|nucleotide binding GO:0017111|nucleoside-triphosphatase activity GO:0043531|ADP binding	NA
pt2_04277	A	A3S	Potri.001G405200	Potri.001G405200(AS) Potri.011G124600(DS) Potri.011G128300(DS)	POPTR_0001s41590	NA	NA	AT5G54400.1	| Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr5:22090680-22091998 FORWARD LENGTH=292	NA	NA	NA	NA	GO:0008152|metabolic process	GO:0008168|methyltransferase activity	GO:0005737|cytoplasm GO:0005774|vacuolar membrane
pt2_04278	C	C1S	Potri.001G405300	Potri.001G405300(CS)	sp|Q38945|DPNPH_ARATH	PAP-specific phosphatase HAL2-like OS=Arabidopsis thaliana GN=AHL PE=2 SV=1	AT5G54390.1	| Symbols: AHL, ATAHL, HL | HAL2-like | chr5:22086133-22087586 FORWARD LENGTH=373	LOC_Os02g56170.1	protein|inositol-1-monophosphatase, putative, expressed	NA	NA	GO:0006790|sulfur compound metabolic process GO:0046854|phosphatidylinositol phosphorylation	GO:0008441|3'(2'),5'-bisphosphate nucleotidase activity	GO:0005739|mitochondrion
pt2_04279	A	A1S	Potri.001G405400	Potri.001G405400(AS)	POPTR_0001s41610	NA	NA	AT1G52855.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15534.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr1:19683137-19683343 REVERSE LENGTH=68	LOC_Os07g37700.1	protein|expressed protein	IMGA|contig_103901_1.1	Unknown protein contig_103901 250-884 F PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005576|extracellular region
pt2_04280	G	G1	NA	NA	POPTR_0001s41615	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04281	A	A2S	Potri.001G405500	Potri.001G405500(AS) Potri.011G128000(DS)	POPTR_0001s41620	sp|Q9LK35|THE1_ARATH	Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1	AT5G54380.1	| Symbols: THE1 | protein kinase family protein | chr5:22077313-22079880 REVERSE LENGTH=855	LOC_Os03g55210.1	protein|TKL_IRAK_CrRLK1L-1.1 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed	IMGA|contig_75928_1.1	Receptor-like kinase contig_75928 234-3010 H PREDN 20111014	GO:0006468|protein phosphorylation GO:0009741|response to brassinosteroid stimulus GO:0009742|brassinosteroid mediated signaling pathway GO:0009791|post-embryonic development GO:0009826|unidimensional cell growth GO:0046777|protein autophosphorylation GO:0051510|regulation of unidimensional cell growth	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005576|extracellular region GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_04282	A	A1S	Potri.001G405600	Potri.001G405600(AS)	POPTR_0001s41630	NA	NA	NA	NA	LOC_Os04g50710.1	protein|pathogenesis-related Bet v I family protein, putative, expressed	NA	NA	NA	NA	NA
pt2_04283	G	G1	NA	NA	POPTR_0001s41640	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04284	A	A1S	Potri.001G405700	Potri.001G405700(AS)	POPTR_0001s41650	sp|Q5RET6|T184C_PONAB	Transmembrane protein 184C OS=Pongo abelii GN=TMEM184C PE=2 SV=1	AT4G21570.1	| Symbols: | Protein of unknown function (DUF300) | chr4:11471126-11472269 REVERSE LENGTH=294	LOC_Os07g32230.1	protein|domain of unknown function domain containing protein, expressed	NA	NA	GO:0008150|biological_process	NA	GO:0005783|endoplasmic reticulum GO:0009507|chloroplast
pt2_04285	A	A1S	Potri.001G405800	Potri.001G405800(AS)	POPTR_0001s41660	NA	NA	AT4G27390.1	| Symbols: | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:13703417-13704655 REVERSE LENGTH=235	LOC_Os05g42280.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	NA	GO:0009507|chloroplast
pt2_04286	A	A1S	Potri.001G405900	Potri.001G405900(AS)	POPTR_0001s41670	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003677|DNA binding GO:0046983|protein dimerization activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04287	A	A1S	Potri.001G406000	Potri.001G406000(AS)	POPTR_0001s41680	sp|O81825|DRL28_ARATH	Probable disease resistance protein At4g27220 OS=Arabidopsis thaliana GN=At4g27220 PE=2 SV=1	AT4G27220.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr4:13633953-13636712 REVERSE LENGTH=919	LOC_Os01g72680.1	protein|disease resistance protein RPS2, putative, expressed	IMGA|Medtr1g041550.1	Cc-nbs resistance protein chr1 11650158-11644067 E EGN_Mt100125 20111014	GO:0006952|defense response	GO:0043531|ADP binding	GO:0005634|nucleus
pt2_04288	A	A1S	Potri.001G406100	Potri.001G406100(AS)	POPTR_0001s41690	sp|O81825|DRL28_ARATH	Probable disease resistance protein At4g27220 OS=Arabidopsis thaliana GN=At4g27220 PE=2 SV=1	AT4G27220.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr4:13633953-13636712 REVERSE LENGTH=919	LOC_Os01g72680.1	protein|disease resistance protein RPS2, putative, expressed	IMGA|Medtr5g085400.1	Cc-nbs-lrr resistance protein chr5 35906400-35914135 H EGN_Mt100125 20111014	GO:0006952|defense response	GO:0043531|ADP binding	GO:0005634|nucleus
pt2_04289	A	A1S	Potri.001G406200	Potri.001G406200(AS)	POPTR_0001s41700	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus GO:0005739|mitochondrion
pt2_04290	A	A1S	Potri.001G406200	Potri.001G406200(AS)	POPTR_0001s41700	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus GO:0005739|mitochondrion
pt2_04291	A	A2S	Potri.001G406300	Potri.001G406300(AS) Potri.011G127000(DS)	POPTR_0001s41720	sp|Q9FL69|AGD5_ARATH	Probable ADP-ribosylation factor GTPase-activating protein AGD5 OS=Arabidopsis thaliana GN=AGD5 PE=1 SV=1	AT5G54310.1	| Symbols: NEV, AGD5 | ARF-GAP domain 5 | chr5:22057262-22061066 REVERSE LENGTH=483	LOC_Os07g37650.1	protein|GTPase-activating protein, putative, expressed	NA	NA	GO:0006499|N-terminal protein myristoylation GO:0010227|floral organ abscission GO:0032312|regulation of ARF GTPase activity GO:0032857|activation of ARF GTPase activity	GO:0003677|DNA binding GO:0008060|ARF GTPase activator activity GO:0008270|zinc ion binding	GO:0005634|nucleus GO:0005768|endosome GO:0005802|trans-Golgi network GO:0005829|cytosol
pt2_04292	A	A1S	Potri.001G406500	Potri.001G406500(AS)	POPTR_0001s41730	sp|Q9LZS7|GDL71_ARATH	GDSL esterase/lipase At5g03610 OS=Arabidopsis thaliana GN=At5g03610 PE=2 SV=1	AT5G03610.1	| Symbols: | GDSL-like Lipase/Acylhydrolase superfamily protein | chr5:915650-918326 FORWARD LENGTH=359	LOC_Os09g39430.1	protein|GDSL-like lipase/acylhydrolase, putative, expressed	IMGA|Medtr1g092690.1	GDSL esterase/lipase chr1 25887545-25884850 E EGN_Mt100125 20111014	GO:0006629|lipid metabolic process	GO:0004091|carboxylesterase activity GO:0016788|hydrolase activity, acting on ester bonds	GO:0005576|extracellular region
pt2_04293	A	A1S	Potri.001G406600	Potri.001G406600(AS)	POPTR_0001s41740	NA	NA	AT1G61260.1	| Symbols: | Protein of unknown function (DUF761) | chr1:22593756-22594986 REVERSE LENGTH=344	LOC_Os07g37620.1	protein|fiber expressed protein, putative, expressed	NA	NA	GO:0008150|biological_process GO:0010200|response to chitin	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_04294	A	A1S	Potri.001G406700	Potri.001G406700(AS)	POPTR_0001s41750	sp|Q9M5P3|CCDA_ARATH	Cytochrome c-type biogenesis ccda-like chloroplastic protein OS=Arabidopsis thaliana GN=CCDA PE=1 SV=1	AT5G54290.2	| Symbols: CcdA | cytochrome c biogenesis protein family | chr5:22051097-22053923 FORWARD LENGTH=355	LOC_Os12g04270.1	protein|cytochrome c-type biogenesis protein dbsD-like, putative, expressed	NA	NA	GO:0010190|cytochrome b6f complex assembly GO:0017004|cytochrome complex assembly GO:0045454|cell redox homeostasis GO:0055114|oxidation-reduction process	NA	GO:0005886|plasma membrane GO:0009534|chloroplast thylakoid GO:0016020|membrane GO:0055035|plastid thylakoid membrane
pt2_04295	A	A1S	Potri.001G406900	Potri.001G406900(AS)	POPTR_0001s41760	NA	NA	NA	NA	LOC_Os07g37570.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_04296	A	A1S	Potri.001G407000	Potri.001G407000(AS)	POPTR_0001s41770	sp|P08799|MYS2_DICDI	Myosin-2 heavy chain OS=Dictyostelium discoideum GN=mhcA PE=1 SV=3	AT5G54280.2	| Symbols: ATM2, ATMYOS1, ATM4 | myosin 2 | chr5:22039606-22045592 REVERSE LENGTH=1220	LOC_Os07g37560.1	protein|myosin-Vb, putative, expressed	IMGA|Medtr1g114540.1	Myosin-like protein chr1 33239745-33251659 E EGN_Mt100125 20111014	NA	GO:0003774|motor activity GO:0005524|ATP binding	GO:0005737|cytoplasm GO:0005886|plasma membrane GO:0016459|myosin complex
pt2_04297	A	A2S	Potri.001G407100	Potri.001G407100(AS) Potri.011G126700(BS)	POPTR_0001s41780	sp|P27489|CB23_SOLLC	Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1	AT5G54270.1	| Symbols: LHCB3, LHCB3*1 | light-harvesting chlorophyll B-binding protein 3 | chr5:22038424-22039383 FORWARD LENGTH=265	LOC_Os07g37550.1	protein|chlorophyll A-B binding protein, putative, expressed	IMGA|Medtr5g097280.1	Chlorophyll a/b binding protein chr5 41563313-41564811 F EGN_Mt100125 20111014	GO:0009765|photosynthesis, light harvesting GO:0015979|photosynthesis	GO:0005198|structural molecule activity	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009579|thylakoid GO:0016020|membrane GO:0030076|light-harvesting complex
pt2_04298	A	A1S	Potri.001G407200	Potri.001G407200(AS)	POPTR_0001s41790	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04299	A	A1S	Potri.001G407300	Potri.001G407300(AS)	POPTR_0001s41800	sp|Q9XGM2|MRE11_ARATH	Double-strand break repair protein MRE11 OS=Arabidopsis thaliana GN=MRE11 PE=2 SV=1	AT5G54260.1	| Symbols: MRE11, ATMRE11 | DNA repair and meiosis protein (Mre11) | chr5:22032702-22037749 FORWARD LENGTH=720	LOC_Os04g54340.1	protein|double-strand break repair protein MRE11, putative, expressed	NA	NA	GO:0006259|DNA metabolic process GO:0006302|double-strand break repair	GO:0004519|endonuclease activity GO:0004527|exonuclease activity GO:0004722|protein serine/threonine phosphatase activity GO:0016787|hydrolase activity GO:0030145|manganese ion binding	GO:0000785|chromatin GO:0000791|euchromatin GO:0000795|synaptonemal complex GO:0005634|nucleus
pt2_04300	A	A3S	Potri.001G407600	Potri.001G407600(AS) Potri.001G407500(BS) Potri.001G407400(BS)	POPTR_0001s41810	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04301	B	B1S	Potri.001G407700	Potri.001G407700(BS)	POPTR_0001s41820	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04302	A	A1S	Potri.001G407800	Potri.001G407800(AS)	POPTR_0001s41830	sp|Q94AS9|CNGC4_ARATH	Cyclic nucleotide-gated ion channel 4 OS=Arabidopsis thaliana GN=CNGC4 PE=2 SV=2	AT5G54250.2	| Symbols: ATCNGC4, CNGC4, HLM1, DND2 | cyclic nucleotide-gated cation channel 4 | chr5:22025684-22029971 REVERSE LENGTH=694	LOC_Os05g42250.1	protein|cyclic nucleotide-gated ion channel 2, putative, expressed	IMGA|Medtr1g064240.1	CNGC5-like protein chr1 16479213-16483284 H EGN_Mt100125 20111014	GO:0009626|plant-type hypersensitive response GO:0030003|cellular cation homeostasis GO:0070838|divalent metal ion transport	GO:0005261|cation channel activity GO:0005516|calmodulin binding GO:0008324|cation transmembrane transporter activity GO:0030551|cyclic nucleotide binding	GO:0005886|plasma membrane GO:0016020|membrane
pt2_04303	B	B1S	Potri.001G407900	Potri.001G407900(BS)	POPTR_0001s41840	sp|Q22799|DYL1_CAEEL	Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans GN=dlc-1 PE=1 SV=1	AT4G27360.1	| Symbols: | Dynein light chain type 1 family protein | chr4:13694032-13694517 FORWARD LENGTH=103	LOC_Os01g55510.1	protein|dynein light chain type 1 domain containing protein, expressed	NA	NA	NA	GO:0003777|microtubule motor activity	GO:0005737|cytoplasm GO:0005875|microtubule associated complex
pt2_04304	A	A1S	Potri.001G408000	Potri.001G408000(AS)	POPTR_0001s41850	NA	NA	AT5G54240.1	| Symbols: | Protein of unknown function (DUF1223) | chr5:22023339-22024461 REVERSE LENGTH=282	LOC_Os07g37310.1	protein|uncharacterized secreted protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_04305	A	A1S	Potri.001G408100	Potri.001G408100(AS)	POPTR_0001s41860	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04306	A	A2S	Potri.001G408200	Potri.001G408200(AS) Potri.011G126200(DS)	POPTR_0001s41870	sp|Q1ECE0|VAP41_ARATH	Vesicle-associated protein 4-1 OS=Arabidopsis thaliana GN=PVA41 PE=2 SV=1	AT5G54110.1	| Symbols: ATMAMI, MAMI | membrane-associated mannitol-induced | chr5:21958356-21960367 FORWARD LENGTH=266	LOC_Os08g04620.1	protein|MSP domain containing protein, putative, expressed	IMGA|Medtr5g012420.1	Vesicle-associated membrane protein chr5 3477683-3474442 F EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0006623|protein targeting to vacuole GO:0006970|response to osmotic stress GO:0008150|biological_process GO:0032880|regulation of protein localization	GO:0005198|structural molecule activity	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_04307	A	A1S	Potri.001G408200	Potri.001G408200(AS)	POPTR_0001s41870	sp|Q1ECE0|VAP41_ARATH	Vesicle-associated protein 4-1 OS=Arabidopsis thaliana GN=PVA41 PE=2 SV=1	AT5G54110.1	| Symbols: ATMAMI, MAMI | membrane-associated mannitol-induced | chr5:21958356-21960367 FORWARD LENGTH=266	LOC_Os08g04620.1	protein|MSP domain containing protein, putative, expressed	IMGA|Medtr5g012420.1	Vesicle-associated membrane protein chr5 3477683-3474442 F EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0006623|protein targeting to vacuole GO:0006970|response to osmotic stress GO:0008150|biological_process GO:0032880|regulation of protein localization	GO:0005198|structural molecule activity	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_04308	A	A1S	Potri.001G408200	Potri.001G408200(AS)	POPTR_0001s41870	sp|Q1ECE0|VAP41_ARATH	Vesicle-associated protein 4-1 OS=Arabidopsis thaliana GN=PVA41 PE=2 SV=1	AT5G54110.1	| Symbols: ATMAMI, MAMI | membrane-associated mannitol-induced | chr5:21958356-21960367 FORWARD LENGTH=266	LOC_Os08g04620.1	protein|MSP domain containing protein, putative, expressed	IMGA|Medtr5g012420.1	Vesicle-associated membrane protein chr5 3477683-3474442 F EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0006623|protein targeting to vacuole GO:0006970|response to osmotic stress GO:0008150|biological_process GO:0032880|regulation of protein localization	GO:0005198|structural molecule activity	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_04309	A	A2S	Potri.001G408200	Potri.001G408200(AS) Potri.011G126200(DS)	POPTR_0001s41870	sp|Q1ECE0|VAP41_ARATH	Vesicle-associated protein 4-1 OS=Arabidopsis thaliana GN=PVA41 PE=2 SV=1	AT5G54110.1	| Symbols: ATMAMI, MAMI | membrane-associated mannitol-induced | chr5:21958356-21960367 FORWARD LENGTH=266	LOC_Os08g04620.1	protein|MSP domain containing protein, putative, expressed	IMGA|Medtr5g012420.1	Vesicle-associated membrane protein chr5 3477683-3474442 F EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0006623|protein targeting to vacuole GO:0006970|response to osmotic stress GO:0008150|biological_process GO:0032880|regulation of protein localization	GO:0005198|structural molecule activity	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_04310	A	A1S	Potri.001G408300	Potri.001G408300(AS)	POPTR_0001s41880	NA	NA	AT4G10265.1	| Symbols: | Wound-responsive family protein | chr4:6373226-6373477 REVERSE LENGTH=83	LOC_Os04g54240.1	protein|wound induced protein, putative, expressed	IMGA|contig_178217_1.1	Wound induced protein contig_178217 475-221 H PREDN 20111014	GO:0009611|response to wounding	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04311	A	A1S	Potri.001G408400	Potri.001G408400(AS)	POPTR_0001s41890	NA	NA	NA	NA	NA	NA	NA	NA	GO:0009611|response to wounding	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04312	A	A1S	Potri.001G408500	Potri.001G408500(AS)	POPTR_0001s41900	sp|Q13574|DGKZ_HUMAN	Diacylglycerol kinase zeta OS=Homo sapiens GN=DGKZ PE=1 SV=3	AT2G20900.2	| Symbols: DGK5, ATDGK5 | diacylglycerol kinase 5 | chr2:8989794-8992798 REVERSE LENGTH=491	LOC_Os04g54200.1	protein|diacylglycerol kinase, putative, expressed	NA	NA	GO:0007205|protein kinase C-activating G-protein coupled receptor signaling pathway GO:0009723|response to ethylene stimulus	GO:0004143|diacylglycerol kinase activity	NA
pt2_04313	A	A1S	Potri.001G408600	Potri.001G408600(AS)	POPTR_0001s41910	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04314	A	A1S	Potri.001G408700	Potri.001G408700(AS)	POPTR_0001s41920	sp|O49608|MYB32_ARATH	Transcription factor MYB32 OS=Arabidopsis thaliana GN=MYB32 PE=2 SV=1	AT4G21440.1	| Symbols: ATMYB102, ATM4, MYB102 | MYB-like 102 | chr4:11418425-11419652 REVERSE LENGTH=350	LOC_Os07g37210.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr5g029840.1	Myb-like transcription factor chr5 12304553-12305846 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006970|response to osmotic stress GO:0007165|signal transduction GO:0009414|response to water deprivation GO:0009611|response to wounding GO:0009651|response to salt stress GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009753|response to jasmonic acid stimulus GO:0015824|proline transport GO:0042538|hyperosmotic salinity response	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_04315	A	A1S	Potri.001G408800	Potri.001G408800(AS)	POPTR_0001s41930	sp|Q8L6Y1|UBP14_ARATH	Ubiquitin carboxyl-terminal hydrolase 14 OS=Arabidopsis thaliana GN=UBP14 PE=1 SV=1	AT3G20630.1	| Symbols: UBP14, TTN6, ATUBP14, PER1 | ubiquitin-specific protease 14 | chr3:7203001-7208340 REVERSE LENGTH=797	LOC_Os01g08200.1	protein|ubiquitin carboxyl-terminal hydrolase 14, putative, expressed	NA	NA	GO:0006511|ubiquitin-dependent protein catabolic process GO:0009793|embryo development ending in seed dormancy GO:0016579|protein deubiquitination GO:0048767|root hair elongation	GO:0004221|ubiquitin thiolesterase activity GO:0004843|ubiquitin-specific protease activity GO:0008242|omega peptidase activity GO:0008270|zinc ion binding	GO:0005829|cytosol
pt2_04316	A	A1S	Potri.001G408900	Potri.001G408900(AS)	POPTR_0001s41940	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_04317	A	A4S	Potri.001G414900	Potri.001G414900(AS) Potri.001G409000(AS) Potri.T024300(BS) Potri.011G125600(BS)	POPTR_0001s41950	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04318	A	A2S	Potri.001G409100	Potri.001G409100(AS) Potri.001G414800(AS)	POPTR_0001s41960	NA	NA	AT5G54430.1	| Symbols: ATPHOS32, PHOS32 | Adenine nucleotide alpha hydrolases-like superfamily protein | chr5:22097563-22099693 REVERSE LENGTH=242	LOC_Os07g36600.3	protein|universal stress protein domain containing protein, putative, expressed	NA	NA	GO:0002238|response to molecule of fungal origin GO:0006950|response to stress GO:0016925|protein sumoylation	NA	GO:0005634|nucleus GO:0005829|cytosol GO:0005886|plasma membrane
pt2_04319	A	A1S	Potri.001G414700	Potri.001G414700(AS)	POPTR_0001s41970	NA	NA	AT5G54470.1	| Symbols: | B-box type zinc finger family protein | chr5:22114584-22115315 REVERSE LENGTH=215	LOC_Os08g08120.3	protein|B-box zinc finger family protein, putative, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0009409|response to cold GO:0009555|pollen development	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_04320	A	A1S	Potri.001G414600	Potri.001G414600(AS)	POPTR_0001s41980	sp|Q9LSQ6|PBP1_ARATH	Calcium-binding protein PBP1 OS=Arabidopsis thaliana GN=PBP1 PE=1 SV=1	AT5G54490.1	| Symbols: PBP1 | pinoid-binding protein 1 | chr5:22121458-22121841 FORWARD LENGTH=127	LOC_Os06g46950.1	protein|EF hand family protein, putative, expressed	NA	NA	GO:0009611|response to wounding GO:0009612|response to mechanical stimulus GO:0010200|response to chitin GO:0080167|response to karrikin	GO:0005509|calcium ion binding	GO:0005886|plasma membrane
pt2_04321	A	A1S	Potri.001G414500	Potri.001G414500(AS)	POPTR_0001s41990	sp|P17840|SLSG3_BRAOL	S-locus-specific glycoprotein S13 OS=Brassica oleracea GN=SLSG PE=2 SV=2	AT4G27290.1	| Symbols: | S-locus lectin protein kinase family protein | chr4:13666281-13669202 FORWARD LENGTH=783	LOC_Os04g54130.1	protein|TKL_IRAK_DUF26-ld.1 - DUF26 kinases have homology to DUF26 containing loci, expressed	IMGA|Medtr5g055070.1	Cysteine-rich receptor-like protein kinase chr5 22150681-22146797 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0048544|recognition of pollen GO:0048765|root hair cell differentiation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_04322	A	A1S	Potri.001G409200	Potri.001G409200(AS)	POPTR_0001s42000	sp|O81832|Y4729_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana GN=At4g27290 PE=2 SV=4	AT4G27290.1	| Symbols: | S-locus lectin protein kinase family protein | chr4:13666281-13669202 FORWARD LENGTH=783	LOC_Os07g36544.1	protein|serine/threonine-protein kinase receptor precursor, putative, expressed	IMGA|contig_169026_1.1	S-locus receptor kinase contig_169026 1661-285 H PREDN 20111014	GO:0006468|protein phosphorylation GO:0048544|recognition of pollen GO:0048765|root hair cell differentiation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_04323	A	A1S	Potri.001G414400	Potri.001G414400(AS)	POPTR_0001s42010	sp|Q9C5S9|CRK6_ARATH	Cysteine-rich receptor-like protein kinase 6 OS=Arabidopsis thaliana GN=CRK6 PE=1 SV=1	AT4G23140.1	| Symbols: CRK6 | cysteine-rich RLK (RECEPTOR-like protein kinase) 6 | chr4:12121397-12124037 FORWARD LENGTH=674	LOC_Os04g54190.1	protein|cysteine-rich receptor-like protein kinase 8 precursor, putative, expressed	IMGA|Medtr5g067310.1	Serine/threonine protein kinase chr5 27450376-27453491 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0048544|recognition of pollen	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_04324	A	A2S	Potri.001G409300	Potri.001G409300(AS) Potri.001G414300(AS)	POPTR_0001s42020	sp|O81832|Y4729_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana GN=At4g27290 PE=2 SV=4	AT4G27290.1	| Symbols: | S-locus lectin protein kinase family protein | chr4:13666281-13669202 FORWARD LENGTH=783	LOC_Os07g36544.2	protein|serine/threonine-protein kinase receptor precursor, putative, expressed	IMGA|Medtr5g067250.1	Serine/threonine protein kinase chr5 27436976-27440231 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0046777|protein autophosphorylation GO:0048544|recognition of pollen	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004675|transmembrane receptor protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding GO:0031625|ubiquitin protein ligase binding	GO:0005773|vacuole GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_04325	A	A1S	Potri.001G414200	Potri.001G414200(AS)	POPTR_0001s42030	sp|O81832|Y4729_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana GN=At4g27290 PE=2 SV=4	AT4G27290.1	| Symbols: | S-locus lectin protein kinase family protein | chr4:13666281-13669202 FORWARD LENGTH=783	LOC_Os07g36544.2	protein|serine/threonine-protein kinase receptor precursor, putative, expressed	IMGA|Medtr5g055070.1	Cysteine-rich receptor-like protein kinase chr5 22150681-22146797 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0048544|recognition of pollen GO:0048765|root hair cell differentiation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_04326	A	A1S	Potri.001G414000	Potri.001G414000(AS)	POPTR_0001s42040	sp|O81832|Y4729_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana GN=At4g27290 PE=2 SV=4	AT4G27290.1	| Symbols: | S-locus lectin protein kinase family protein | chr4:13666281-13669202 FORWARD LENGTH=783	LOC_Os07g36544.2	protein|serine/threonine-protein kinase receptor precursor, putative, expressed	IMGA|Medtr5g055070.1	Cysteine-rich receptor-like protein kinase chr5 22150681-22146797 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0048544|recognition of pollen GO:0048765|root hair cell differentiation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_04327	A	A1S	Potri.001G413900	Potri.001G413900(AS)	POPTR_0001s42050	sp|O81832|Y4729_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana GN=At4g27290 PE=2 SV=4	AT4G27290.1	| Symbols: | S-locus lectin protein kinase family protein | chr4:13666281-13669202 FORWARD LENGTH=783	LOC_Os07g36544.2	protein|serine/threonine-protein kinase receptor precursor, putative, expressed	IMGA|Medtr5g055070.1	Cysteine-rich receptor-like protein kinase chr5 22150681-22146797 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0048544|recognition of pollen GO:0048765|root hair cell differentiation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_04328	A	A1S	Potri.001G413800	Potri.001G413800(AS)	POPTR_0001s42060	sp|O81832|Y4729_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana GN=At4g27290 PE=2 SV=4	AT4G27290.1	| Symbols: | S-locus lectin protein kinase family protein | chr4:13666281-13669202 FORWARD LENGTH=783	LOC_Os03g35600.1	protein|serine/threonine-protein kinase receptor precursor, putative, expressed	IMGA|Medtr5g055070.1	Cysteine-rich receptor-like protein kinase chr5 22150681-22146797 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0046777|protein autophosphorylation GO:0048544|recognition of pollen	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004675|transmembrane receptor protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding GO:0031625|ubiquitin protein ligase binding	GO:0005773|vacuole GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_04329	A	A1S	Potri.001G413700	Potri.001G413700(AS)	POPTR_0001s42070	sp|O81832|Y4729_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana GN=At4g27290 PE=2 SV=4	AT4G27290.1	| Symbols: | S-locus lectin protein kinase family protein | chr4:13666281-13669202 FORWARD LENGTH=783	LOC_Os01g57560.1	protein|serine/threonine-protein kinase receptor precursor, putative, expressed	IMGA|Medtr5g067250.1	Serine/threonine protein kinase chr5 27436976-27440231 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0048544|recognition of pollen GO:0048765|root hair cell differentiation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_04330	C	C1A	Potri.001G413500	Potri.001G413500(CA)	NA	NA	AT2G31670.1	| Symbols: | Stress responsive alpha-beta barrel domain protein | chr2:13472699-13473490 REVERSE LENGTH=263	LOC_Os07g41810.4	protein|stress responsive A/B Barrel domain containing protein, expressed	IMGA|contig_172521_2.1	Stress responsive alpha-beta barrel domain protein contig_172521 2403-1334 F PREDN 20111014	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0008150|biological_process GO:0009086|methionine biosynthetic process GO:0019344|cysteine biosynthetic process GO:0019761|glucosinolate biosynthetic process	GO:0003674|molecular_function	GO:0005777|peroxisome GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_04331	A	A1S	Potri.001G413500	Potri.001G413500(AS)	POPTR_0001s42090	NA	NA	AT2G31670.1	| Symbols: | Stress responsive alpha-beta barrel domain protein | chr2:13472699-13473490 REVERSE LENGTH=263	LOC_Os07g41810.4	protein|stress responsive A/B Barrel domain containing protein, expressed	IMGA|contig_172521_2.1	Stress responsive alpha-beta barrel domain protein contig_172521 2403-1334 F PREDN 20111014	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0008150|biological_process GO:0009086|methionine biosynthetic process GO:0019344|cysteine biosynthetic process GO:0019761|glucosinolate biosynthetic process	GO:0003674|molecular_function	GO:0005777|peroxisome GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_04332	A	A1S	Potri.001G413400	Potri.001G413400(AS)	POPTR_0001s42100	sp|O81832|Y4729_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana GN=At4g27290 PE=2 SV=4	AT4G27290.1	| Symbols: | S-locus lectin protein kinase family protein | chr4:13666281-13669202 FORWARD LENGTH=783	LOC_Os01g57560.1	protein|serine/threonine-protein kinase receptor precursor, putative, expressed	IMGA|Medtr5g067250.1	Serine/threonine protein kinase chr5 27436976-27440231 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0046777|protein autophosphorylation GO:0048544|recognition of pollen GO:0048765|root hair cell differentiation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004675|transmembrane receptor protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding GO:0031625|ubiquitin protein ligase binding	GO:0005773|vacuole GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_04333	G	G1	NA	NA	POPTR_0001s42110	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04334	G	G1	NA	NA	POPTR_0001s42115	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04335	A	A3S	Potri.001G413200	Potri.001G413200(AS) Potri.010G155900(BS) Potri.004G190600(DS)	POPTR_0001s42120	sp|B7ZWR6|OEP61_ARATH	Outer envelope protein 61, chloroplastic OS=Arabidopsis thaliana GN=OEP61 PE=1 SV=1	AT5G21990.1	| Symbols: TPR7 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:7273395-7276318 FORWARD LENGTH=554	LOC_Os07g06710.1	protein|tetratricopeptide repeat, putative, expressed	NA	NA	GO:0000413|protein peptidyl-prolyl isomerization GO:0018208|peptidyl-proline modification GO:0046967|cytosol to ER transport	GO:0003755|peptidyl-prolyl cis-trans isomerase activity GO:0005528|FK506 binding	GO:0005789|endoplasmic reticulum membrane GO:0005829|cytosol GO:0009707|chloroplast outer membrane GO:0016020|membrane
pt2_04336	A	A4S	Potri.001G413100	Potri.001G413100(AS) Potri.010G156000(BS) Potri.018G078000(BS) Potri.011G033600(DS)	POPTR_0001s42130	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04337	A	A2S	Potri.001G413000	Potri.001G413000(AS) Potri.001G413300(BS)	POPTR_0001s42140	sp|O81832|Y4729_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana GN=At4g27290 PE=2 SV=4	AT4G27290.1	| Symbols: | S-locus lectin protein kinase family protein | chr4:13666281-13669202 FORWARD LENGTH=783	LOC_Os07g36544.2	protein|serine/threonine-protein kinase receptor precursor, putative, expressed	IMGA|Medtr5g055070.1	Cysteine-rich receptor-like protein kinase chr5 22150681-22146797 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0048544|recognition of pollen GO:0048765|root hair cell differentiation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_04338	C	C1S	Potri.001G412900	Potri.001G412900(CS)	sp|Q8W033|AL3I1_ARATH	Aldehyde dehydrogenase family 3 member I1, chloroplastic OS=Arabidopsis thaliana GN=ALDH3I1 PE=2 SV=2	AT4G34240.1	| Symbols: ALDH3I1, ALDH3 | aldehyde dehydrogenase 3I1 | chr4:16389801-16392633 FORWARD LENGTH=550	LOC_Os11g08300.1	protein|aldehyde dehydrogenase, putative, expressed	IMGA|Medtr1g014320.1	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase chr1 3773177-3769070 E EGN_Mt100125 20111014	GO:0006081|cellular aldehyde metabolic process GO:0008152|metabolic process GO:0009269|response to desiccation GO:0009414|response to water deprivation GO:0009651|response to salt stress GO:0009737|response to abscisic acid stimulus GO:0055114|oxidation-reduction process	GO:0004028|3-chloroallyl aldehyde dehydrogenase activity GO:0004029|aldehyde dehydrogenase (NAD) activity GO:0033721|aldehyde dehydrogenase (NADP+) activity	GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0005773|vacuole GO:0005783|endoplasmic reticulum GO:0005794|Golgi apparatus GO:0009506|plasmodesma GO:0009507|chloroplast GO:0009536|plastid GO:0009941|chloroplast envelope GO:0016020|membrane
pt2_04339	A	A1S	Potri.001G412900	Potri.001G412900(AS)	POPTR_0001s42150	sp|Q8W033|AL3I1_ARATH	Aldehyde dehydrogenase family 3 member I1, chloroplastic OS=Arabidopsis thaliana GN=ALDH3I1 PE=2 SV=2	AT4G34240.1	| Symbols: ALDH3I1, ALDH3 | aldehyde dehydrogenase 3I1 | chr4:16389801-16392633 FORWARD LENGTH=550	LOC_Os11g08300.1	protein|aldehyde dehydrogenase, putative, expressed	IMGA|Medtr1g014320.1	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase chr1 3773177-3769070 E EGN_Mt100125 20111014	GO:0006081|cellular aldehyde metabolic process GO:0008152|metabolic process GO:0009269|response to desiccation GO:0009414|response to water deprivation GO:0009651|response to salt stress GO:0009737|response to abscisic acid stimulus GO:0055114|oxidation-reduction process	GO:0004028|3-chloroallyl aldehyde dehydrogenase activity GO:0004029|aldehyde dehydrogenase (NAD) activity GO:0033721|aldehyde dehydrogenase (NADP+) activity	GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0005773|vacuole GO:0005783|endoplasmic reticulum GO:0005794|Golgi apparatus GO:0009506|plasmodesma GO:0009507|chloroplast GO:0009536|plastid GO:0009941|chloroplast envelope GO:0016020|membrane
pt2_04340	A	A1S	Potri.001G412800	Potri.001G412800(AS)	POPTR_0001s42170	NA	NA	AT2G36740.1	| Symbols: SWC2, ATSWC2 | sequence-specific DNA binding transcription factors;DNA binding;DNA binding | chr2:15407066-15409430 REVERSE LENGTH=365	LOC_Os08g09320.1	protein|YL1 nuclear protein C-terminal domain containing protein, expressed	NA	NA	GO:0006338|chromatin remodeling GO:0006355|regulation of transcription, DNA-dependent GO:0008284|positive regulation of cell proliferation GO:0009909|regulation of flower development GO:0042742|defense response to bacterium	GO:0003677|DNA binding	GO:0005634|nucleus
pt2_04341	C	C1S	Potri.001G412800	Potri.001G412800(CS)	NA	NA	AT2G36740.1	| Symbols: SWC2, ATSWC2 | sequence-specific DNA binding transcription factors;DNA binding;DNA binding | chr2:15407066-15409430 REVERSE LENGTH=365	LOC_Os08g09320.1	protein|YL1 nuclear protein C-terminal domain containing protein, expressed	NA	NA	GO:0006338|chromatin remodeling GO:0006355|regulation of transcription, DNA-dependent GO:0008284|positive regulation of cell proliferation GO:0009909|regulation of flower development GO:0042742|defense response to bacterium	GO:0003677|DNA binding	GO:0005634|nucleus
pt2_04342	A	A1S	Potri.001G412700	Potri.001G412700(AS)	POPTR_0001s42180	sp|O81832|Y4729_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana GN=At4g27290 PE=2 SV=4	AT4G27290.1	| Symbols: | S-locus lectin protein kinase family protein | chr4:13666281-13669202 FORWARD LENGTH=783	LOC_Os01g57480.1	protein|serine/threonine-protein kinase receptor precursor, putative, expressed	IMGA|Medtr5g067250.1	Serine/threonine protein kinase chr5 27436976-27440231 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0048544|recognition of pollen GO:0048765|root hair cell differentiation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_04343	G	G1	NA	NA	POPTR_0001s42190	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04344	A	A1S	Potri.001G412500	Potri.001G412500(AS)	POPTR_0001s42200	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04345	B	B1S	Potri.001G412400	Potri.001G412400(BS)	POPTR_0001s42210	sp|O81832|Y4729_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana GN=At4g27290 PE=2 SV=4	AT4G27290.1	| Symbols: | S-locus lectin protein kinase family protein | chr4:13666281-13669202 FORWARD LENGTH=783	LOC_Os03g35600.1	protein|serine/threonine-protein kinase receptor precursor, putative, expressed	IMGA|Medtr5g055070.1	Cysteine-rich receptor-like protein kinase chr5 22150681-22146797 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0046777|protein autophosphorylation GO:0048544|recognition of pollen	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004675|transmembrane receptor protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding GO:0031625|ubiquitin protein ligase binding	GO:0005773|vacuole GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_04346	A	A2S	Potri.001G412300	Potri.001G412300(AS) Potri.T021600(DS)	POPTR_0001s42220	sp|O81832|Y4729_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana GN=At4g27290 PE=2 SV=4	AT4G27290.1	| Symbols: | S-locus lectin protein kinase family protein | chr4:13666281-13669202 FORWARD LENGTH=783	LOC_Os01g57560.1	protein|serine/threonine-protein kinase receptor precursor, putative, expressed	IMGA|Medtr5g055070.1	Cysteine-rich receptor-like protein kinase chr5 22150681-22146797 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0048544|recognition of pollen GO:0048765|root hair cell differentiation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_04347	A	A1S	Potri.001G412200	Potri.001G412200(AS)	POPTR_0001s42230	sp|O81832|Y4729_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana GN=At4g27290 PE=2 SV=4	AT4G27290.1	| Symbols: | S-locus lectin protein kinase family protein | chr4:13666281-13669202 FORWARD LENGTH=783	LOC_Os03g35600.1	protein|serine/threonine-protein kinase receptor precursor, putative, expressed	IMGA|Medtr5g067250.1	Serine/threonine protein kinase chr5 27436976-27440231 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0048544|recognition of pollen GO:0048765|root hair cell differentiation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_04348	A	A1S	Potri.001G412100	Potri.001G412100(AS)	POPTR_0001s42250	sp|Q9LPZ9|SD113_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13 OS=Arabidopsis thaliana GN=SD113 PE=1 SV=2	AT1G11330.1	| Symbols: | S-locus lectin protein kinase family protein | chr1:3810372-3813416 FORWARD LENGTH=840	LOC_Os09g37834.1	protein|serine/threonine-protein kinase receptor precursor, putative, expressed	IMGA|Medtr5g055070.1	Cysteine-rich receptor-like protein kinase chr5 22150681-22146797 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0048544|recognition of pollen GO:0048765|root hair cell differentiation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_04349	A	A1S	Potri.001G412000	Potri.001G412000(AS)	POPTR_0001s42260	sp|O81832|Y4729_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana GN=At4g27290 PE=2 SV=4	AT4G27290.1	| Symbols: | S-locus lectin protein kinase family protein | chr4:13666281-13669202 FORWARD LENGTH=783	LOC_Os03g35600.1	protein|serine/threonine-protein kinase receptor precursor, putative, expressed	IMGA|Medtr5g067250.1	Serine/threonine protein kinase chr5 27436976-27440231 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0048544|recognition of pollen GO:0048765|root hair cell differentiation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_04350	A	A1S	Potri.001G411800	Potri.001G411800(AS)	POPTR_0001s42270	sp|Q9LSQ6|PBP1_ARATH	Calcium-binding protein PBP1 OS=Arabidopsis thaliana GN=PBP1 PE=1 SV=1	AT4G27280.1	| Symbols: | Calcium-binding EF-hand family protein | chr4:13663770-13664162 REVERSE LENGTH=130	LOC_Os01g57470.1	protein|EF hand family protein, putative, expressed	NA	NA	GO:0009611|response to wounding GO:0009612|response to mechanical stimulus GO:0010200|response to chitin GO:0080167|response to karrikin	GO:0005509|calcium ion binding	GO:0005886|plasma membrane
pt2_04351	A	A1S	Potri.001G411700	Potri.001G411700(AS)	POPTR_0001s42280	sp|O81832|Y4729_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana GN=At4g27290 PE=2 SV=4	AT4G27290.1	| Symbols: | S-locus lectin protein kinase family protein | chr4:13666281-13669202 FORWARD LENGTH=783	LOC_Os07g36544.2	protein|serine/threonine-protein kinase receptor precursor, putative, expressed	IMGA|Medtr5g067250.1	Serine/threonine protein kinase chr5 27436976-27440231 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0048544|recognition of pollen GO:0048765|root hair cell differentiation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_04352	C	C1S	Potri.001G411500	Potri.001G411500(CS)	sp|O81832|Y4729_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana GN=At4g27290 PE=2 SV=4	AT4G27290.1	| Symbols: | S-locus lectin protein kinase family protein | chr4:13666281-13669202 FORWARD LENGTH=783	LOC_Os03g35600.1	protein|serine/threonine-protein kinase receptor precursor, putative, expressed	IMGA|contig_169026_1.1	S-locus receptor kinase contig_169026 1661-285 H PREDN 20111014	GO:0006468|protein phosphorylation GO:0048544|recognition of pollen GO:0048765|root hair cell differentiation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_04353	B	B4S	Potri.001G411300	Potri.001G411300(BS) Potri.001G418100(BS) Potri.001G410800(BS) Potri.001G411400(BS)	POPTR_0001s42300	sp|O81832|Y4729_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana GN=At4g27290 PE=2 SV=4	AT4G27290.1	| Symbols: | S-locus lectin protein kinase family protein | chr4:13666281-13669202 FORWARD LENGTH=783	LOC_Os01g57560.1	protein|serine/threonine-protein kinase receptor precursor, putative, expressed	IMGA|Medtr5g055070.1	Cysteine-rich receptor-like protein kinase chr5 22150681-22146797 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0048544|recognition of pollen GO:0048765|root hair cell differentiation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_04354	D	D4S	Potri.001G411300	Potri.001G411300(DS) Potri.001G418100(DS) Potri.001G410800(DS) Potri.001G411400(DS)	POPTR_0001s42310	sp|O81832|Y4729_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana GN=At4g27290 PE=2 SV=4	AT4G27290.1	| Symbols: | S-locus lectin protein kinase family protein | chr4:13666281-13669202 FORWARD LENGTH=783	LOC_Os01g57560.1	protein|serine/threonine-protein kinase receptor precursor, putative, expressed	IMGA|Medtr5g055070.1	Cysteine-rich receptor-like protein kinase chr5 22150681-22146797 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0048544|recognition of pollen GO:0048765|root hair cell differentiation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_04355	G	G1	NA	NA	POPTR_0001s42320	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04356	A	A2S	Potri.001G411100	Potri.001G411100(AS) Potri.001G411000(BS)	POPTR_0001s42330	sp|O81832|Y4729_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana GN=At4g27290 PE=2 SV=4	AT4G27290.1	| Symbols: | S-locus lectin protein kinase family protein | chr4:13666281-13669202 FORWARD LENGTH=783	LOC_Os04g53994.1	protein|kinase, putative, expressed	IMGA|Medtr5g055070.1	Cysteine-rich receptor-like protein kinase chr5 22150681-22146797 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0048544|recognition of pollen GO:0048765|root hair cell differentiation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_04357	B	B2S	Potri.001G411000	Potri.001G411000(BS) Potri.001G411100(BS)	POPTR_0001s42340	sp|O81832|Y4729_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana GN=At4g27290 PE=2 SV=4	AT4G27290.1	| Symbols: | S-locus lectin protein kinase family protein | chr4:13666281-13669202 FORWARD LENGTH=783	LOC_Os07g36544.2	protein|serine/threonine-protein kinase receptor precursor, putative, expressed	IMGA|Medtr5g055070.1	Cysteine-rich receptor-like protein kinase chr5 22150681-22146797 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0048544|recognition of pollen GO:0048765|root hair cell differentiation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_04358	A	A1S	Potri.001G427400	Potri.001G427400(AS)	POPTR_0001s42350	sp|Q95RC0|NAA30_DROME	N-alpha-acetyltransferase 30 OS=Drosophila melanogaster GN=CG11412 PE=2 SV=1	AT2G38130.2	| Symbols: ATMAK3 | Acyl-CoA N-acyltransferases (NAT) superfamily protein | chr2:15978639-15980145 REVERSE LENGTH=190	LOC_Os11g32280.2	protein|acetyltransferase, GNAT family, putative, expressed	NA	NA	GO:0001676|long-chain fatty acid metabolic process GO:0002213|defense response to insect GO:0006301|postreplication repair GO:0006633|fatty acid biosynthetic process GO:0008152|metabolic process	GO:0008080|N-acetyltransferase activity	GO:0005737|cytoplasm
pt2_04359	A	A6S	Potri.001G427300	Potri.001G427300(AS) Potri.T162100(DS) Potri.001G429800(DS) Potri.001G434000(DS) Potri.001G444700(DS) Potri.001G426600(DS)	POPTR_0001s42370	NA	NA	AT4G27220.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr4:13633953-13636712 REVERSE LENGTH=919	LOC_Os01g57870.1	protein|disease resistance protein RPS2, putative, expressed	IMGA|Medtr1g041550.1	Cc-nbs resistance protein chr1 11650158-11644067 E EGN_Mt100125 20111014	GO:0006952|defense response	GO:0043531|ADP binding	GO:0005634|nucleus
pt2_04360	A	A4S	Potri.001G427100	Potri.001G427100(AS) Potri.001G427600(DS) Potri.001G426200(DS) Potri.T065900(DS)	POPTR_0001s42380	sp|Q9T048|DRL27_ARATH	Disease resistance protein At4g27190 OS=Arabidopsis thaliana GN=At4g27190 PE=2 SV=1	AT4G27190.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr4:13620977-13623934 REVERSE LENGTH=985	LOC_Os09g14010.1	protein|disease resistance protein RPS2, putative, expressed	IMGA|Medtr1g041550.1	Cc-nbs resistance protein chr1 11650158-11644067 E EGN_Mt100125 20111014	GO:0006952|defense response	GO:0000166|nucleotide binding GO:0017111|nucleoside-triphosphatase activity GO:0043531|ADP binding	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_04361	A	A1S	Potri.001G427000	Potri.001G427000(AS)	POPTR_0001s42385	sp|Q42484|RPS2_ARATH	Disease resistance protein RPS2 OS=Arabidopsis thaliana GN=RPS2 PE=1 SV=1	AT4G26090.1	| Symbols: RPS2 | NB-ARC domain-containing disease resistance protein | chr4:13224596-13227325 FORWARD LENGTH=909	LOC_Os11g29090.1	protein|NB-ARC/LRR disease resistance protein, putative, expressed	IMGA|Medtr1g041550.1	Cc-nbs resistance protein chr1 11650158-11644067 E EGN_Mt100125 20111014	GO:0006952|defense response	GO:0043531|ADP binding	GO:0005634|nucleus
pt2_04362	A	A4S	Potri.001G426900	Potri.001G426900(AS) Potri.001G429800(DS) Potri.001G434000(DS) Potri.T100800(DS)	POPTR_0001s42390	sp|Q9T048|DRL27_ARATH	Disease resistance protein At4g27190 OS=Arabidopsis thaliana GN=At4g27190 PE=2 SV=1	AT4G27190.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr4:13620977-13623934 REVERSE LENGTH=985	LOC_Os11g29090.1	protein|NB-ARC/LRR disease resistance protein, putative, expressed	IMGA|Medtr5g092190.1	Cc-nbs-lrr resistance protein chr5 39226547-39217532 E EGN_Mt100125 20111014	GO:0006952|defense response	GO:0043531|ADP binding	GO:0005634|nucleus
pt2_04363	A	A5S	Potri.001G426600	Potri.001G426600(AS) Potri.001G427700(BS) Potri.001G422800(BS) Potri.001G434000(DS) Potri.001G426500(DS)	POPTR_0001s42395	sp|O81825|DRL28_ARATH	Probable disease resistance protein At4g27220 OS=Arabidopsis thaliana GN=At4g27220 PE=2 SV=1	AT4G27220.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr4:13633953-13636712 REVERSE LENGTH=919	LOC_Os01g72680.1	protein|disease resistance protein RPS2, putative, expressed	IMGA|Medtr5g092190.1	Cc-nbs-lrr resistance protein chr5 39226547-39217532 E EGN_Mt100125 20111014	GO:0006952|defense response	GO:0043531|ADP binding	GO:0005634|nucleus
pt2_04364	A	A3S	Potri.001G426600	Potri.001G426600(AS) Potri.T100800(BS) Potri.001G433600(DS)	POPTR_0001s42400	sp|O81825|DRL28_ARATH	Probable disease resistance protein At4g27220 OS=Arabidopsis thaliana GN=At4g27220 PE=2 SV=1	AT4G27220.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr4:13633953-13636712 REVERSE LENGTH=919	LOC_Os01g72680.1	protein|disease resistance protein RPS2, putative, expressed	IMGA|Medtr5g092190.1	Cc-nbs-lrr resistance protein chr5 39226547-39217532 E EGN_Mt100125 20111014	GO:0006952|defense response	GO:0043531|ADP binding	GO:0005634|nucleus
pt2_04365	A	A1S	Potri.001G426500	Potri.001G426500(AS)	POPTR_0001s42410	NA	NA	NA	NA	NA	NA	IMGA|Medtr5g092190.1	Cc-nbs-lrr resistance protein chr5 39226547-39217532 E EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0002831|regulation of response to biotic stimulus GO:0006612|protein targeting to membrane GO:0006952|defense response GO:0009595|detection of biotic stimulus GO:0009617|response to bacterium GO:0009626|plant-type hypersensitive response GO:0009697|salicylic acid biosynthetic process GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0016045|detection of bacterium GO:0031347|regulation of defense response GO:0031348|negative regulation of defense response GO:0042742|defense response to bacterium GO:0043069|negative regulation of programmed cell death GO:0043900|regulation of multi-organism process GO:0045087|innate immune response GO:0050776|regulation of immune response GO:0050832|defense response to fungus GO:0051707|response to other organism	GO:0000166|nucleotide binding GO:0005515|protein binding GO:0017111|nucleoside-triphosphatase activity GO:0043531|ADP binding	GO:0005886|plasma membrane
pt2_04366	A	A1S	Potri.001G426400	Potri.001G426400(AS)	POPTR_0001s42420	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04367	A	A1S	Potri.001G426300	Potri.001G426300(AS)	POPTR_0001s42430	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04368	A	A2S	Potri.001G427600	Potri.001G427600(AS) Potri.001G426200(BS)	POPTR_0001s42440	sp|Q9T048|DRL27_ARATH	Disease resistance protein At4g27190 OS=Arabidopsis thaliana GN=At4g27190 PE=2 SV=1	AT4G27190.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr4:13620977-13623934 REVERSE LENGTH=985	LOC_Os01g72680.1	protein|disease resistance protein RPS2, putative, expressed	IMGA|Medtr1g041550.1	Cc-nbs resistance protein chr1 11650158-11644067 E EGN_Mt100125 20111014	GO:0006952|defense response	GO:0000166|nucleotide binding GO:0017111|nucleoside-triphosphatase activity GO:0043531|ADP binding	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_04369	R	R	NA	NA	POPTR_0001s42450	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04370	B	B1S	Potri.001G425700	Potri.001G425700(BS)	POPTR_0001s42460	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04371	C	C3S	Potri.001G425900	Potri.001G425900(CS) Potri.001G425300(CS) Potri.001G429500(CS)	NA	NA	NA	NA	NA	NA	IMGA|Medtr5g092190.1	Cc-nbs-lrr resistance protein chr5 39226547-39217532 E EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0006826|iron ion transport GO:0006952|defense response GO:0010106|cellular response to iron ion starvation GO:0010167|response to nitrate GO:0015706|nitrate transport	GO:0043531|ADP binding	GO:0005634|nucleus
pt2_04372	A	A6S	Potri.001G429500	Potri.001G429500(AS) Potri.001G427300(DS) Potri.001G434000(DS) Potri.001G426600(DS) Potri.001G426500(DS) Potri.001G428100(DS)	POPTR_0001s42480	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04373	A	A8S	Potri.001G425800	Potri.001G425800(AS) Potri.001G433800(BS) Potri.001G427400(BS) Potri.T066000(BS) Potri.001G430000(BS) Potri.001G429200(BS) Potri.001G435300(BS) Potri.011G139300(DS)	POPTR_0001s42490	sp|Q8CES0|NAA30_MOUSE	N-alpha-acetyltransferase 30 OS=Mus musculus GN=Naa30 PE=2 SV=2	AT2G38130.2	| Symbols: ATMAK3 | Acyl-CoA N-acyltransferases (NAT) superfamily protein | chr2:15978639-15980145 REVERSE LENGTH=190	LOC_Os11g32280.1	protein|acetyltransferase, GNAT family, putative, expressed	NA	NA	GO:0001676|long-chain fatty acid metabolic process GO:0002213|defense response to insect GO:0006301|postreplication repair GO:0006633|fatty acid biosynthetic process GO:0008152|metabolic process	GO:0008080|N-acetyltransferase activity	GO:0005737|cytoplasm
pt2_04374	D	D3S	Potri.T066000	Potri.T066000(DS) Potri.001G430000(DS) Potri.001G435300(DS)	POPTR_0001s42490	sp|Q0IHH1|NAA30_XENLA	N-alpha-acetyltransferase 30 OS=Xenopus laevis GN=naa30 PE=2 SV=1	AT2G38130.2	| Symbols: ATMAK3 | Acyl-CoA N-acyltransferases (NAT) superfamily protein | chr2:15978639-15980145 REVERSE LENGTH=190	LOC_Os11g32280.1	protein|acetyltransferase, GNAT family, putative, expressed	IMGA|Medtr5g098790.1	N-acetyltransferase NAT13 chr5 42227632-42224778 F EGN_Mt100125 20111014	GO:0001676|long-chain fatty acid metabolic process GO:0002213|defense response to insect GO:0006301|postreplication repair GO:0006633|fatty acid biosynthetic process GO:0008152|metabolic process	GO:0008080|N-acetyltransferase activity	GO:0005737|cytoplasm
pt2_04375	B	B1S	Potri.001G422700	Potri.001G422700(BS)	POPTR_0001s42500	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04376	B	B2S	Potri.001G422800	Potri.001G422800(BS) Potri.001G428100(BS)	POPTR_0001s42510	sp|Q9T048|DRL27_ARATH	Disease resistance protein At4g27190 OS=Arabidopsis thaliana GN=At4g27190 PE=2 SV=1	AT4G27190.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr4:13620977-13623934 REVERSE LENGTH=985	LOC_Os01g72680.1	protein|disease resistance protein RPS2, putative, expressed	IMGA|Medtr5g085400.1	Cc-nbs-lrr resistance protein chr5 35906400-35914135 H EGN_Mt100125 20111014	GO:0006952|defense response	GO:0000166|nucleotide binding GO:0017111|nucleoside-triphosphatase activity GO:0043531|ADP binding	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_04377	C	C1S	Potri.001G425500	Potri.001G425500(CS)	sp|O81825|DRL28_ARATH	Probable disease resistance protein At4g27220 OS=Arabidopsis thaliana GN=At4g27220 PE=2 SV=1	AT4G27220.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr4:13633953-13636712 REVERSE LENGTH=919	LOC_Os01g72680.1	protein|disease resistance protein RPS2, putative, expressed	IMGA|Medtr1g041550.1	Cc-nbs resistance protein chr1 11650158-11644067 E EGN_Mt100125 20111014	GO:0006952|defense response	GO:0000166|nucleotide binding GO:0017111|nucleoside-triphosphatase activity GO:0043531|ADP binding	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_04378	C	C1S	Potri.001G425500	Potri.001G425500(CS)	sp|O81825|DRL28_ARATH	Probable disease resistance protein At4g27220 OS=Arabidopsis thaliana GN=At4g27220 PE=2 SV=1	AT4G27220.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr4:13633953-13636712 REVERSE LENGTH=919	LOC_Os01g72680.1	protein|disease resistance protein RPS2, putative, expressed	IMGA|Medtr1g041550.1	Cc-nbs resistance protein chr1 11650158-11644067 E EGN_Mt100125 20111014	GO:0006952|defense response	GO:0000166|nucleotide binding GO:0017111|nucleoside-triphosphatase activity GO:0043531|ADP binding	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_04379	A	A15S	Potri.001G434000	Potri.001G434000(AS) Potri.001G434700(AS) Potri.001G429600(AS) Potri.001G433500(AS) Potri.T065900(AS) Potri.001G427500(BS) Potri.001G432300(BS) Potri.001G429100(BS) Potri.001G427000(BS) Potri.001G435000(BS) Potri.001G425500(BS) Potri.001G422800(BS) Potri.001G426600(BS) Potri.001G426500(BS) Potri.001G426200(DS)	POPTR_0001s42540	sp|Q9T048|DRL27_ARATH	Disease resistance protein At4g27190 OS=Arabidopsis thaliana GN=At4g27190 PE=2 SV=1	AT4G27190.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr4:13620977-13623934 REVERSE LENGTH=985	LOC_Os01g72680.1	protein|disease resistance protein RPS2, putative, expressed	IMGA|Medtr1g041550.1	Cc-nbs resistance protein chr1 11650158-11644067 E EGN_Mt100125 20111014	GO:0006952|defense response	GO:0000166|nucleotide binding GO:0017111|nucleoside-triphosphatase activity GO:0043531|ADP binding	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_04380	D	D4S	Potri.001G429300	Potri.001G429300(DS) Potri.007G072200(DS) Potri.004G063700(DS) Potri.017G057600(DS)	POPTR_0001s42550	NA	NA	NA	NA	LOC_Os01g15720.1	protein|tobamovirus movement protein containing protein, expressed	NA	NA	NA	NA	NA
pt2_04381	G	G1	NA	NA	POPTR_0001s42560	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04382	A	A1S	Potri.001G434800	Potri.001G434800(AS)	POPTR_0001s42570	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04383	B	B1S	Potri.001G411200	Potri.001G411200(BS)	POPTR_0001s42580	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04384	A	A8S	Potri.001G435000	Potri.001G435000(AS) Potri.001G426500(BS) Potri.T066300(DS) Potri.001G427700(DS) Potri.001G434000(DS) Potri.001G422800(DS) Potri.001G426900(DS) Potri.T065900(DS)	POPTR_0001s42590	NA	NA	AT4G26090.1	| Symbols: RPS2 | NB-ARC domain-containing disease resistance protein | chr4:13224596-13227325 FORWARD LENGTH=909	NA	NA	IMGA|Medtr1g041550.1	Cc-nbs resistance protein chr1 11650158-11644067 E EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0002831|regulation of response to biotic stimulus GO:0006612|protein targeting to membrane GO:0006952|defense response GO:0009595|detection of biotic stimulus GO:0009617|response to bacterium GO:0009626|plant-type hypersensitive response GO:0009697|salicylic acid biosynthetic process GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0016045|detection of bacterium GO:0031347|regulation of defense response GO:0031348|negative regulation of defense response GO:0042742|defense response to bacterium GO:0043069|negative regulation of programmed cell death GO:0043900|regulation of multi-organism process GO:0045087|innate immune response GO:0050776|regulation of immune response GO:0050832|defense response to fungus GO:0051707|response to other organism	GO:0000166|nucleotide binding GO:0005515|protein binding GO:0017111|nucleoside-triphosphatase activity GO:0043531|ADP binding	GO:0005886|plasma membrane
pt2_04385	R	R	NA	NA	POPTR_0001s42600	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04386	A	A1S	Potri.001G435100	Potri.001G435100(AS)	POPTR_0001s42610	sp|Q9T048|DRL27_ARATH	Disease resistance protein At4g27190 OS=Arabidopsis thaliana GN=At4g27190 PE=2 SV=1	AT4G27190.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr4:13620977-13623934 REVERSE LENGTH=985	LOC_Os01g72680.1	protein|disease resistance protein RPS2, putative, expressed	IMGA|Medtr5g092190.1	Cc-nbs-lrr resistance protein chr5 39226547-39217532 E EGN_Mt100125 20111014	GO:0006952|defense response	GO:0000166|nucleotide binding GO:0017111|nucleoside-triphosphatase activity GO:0043531|ADP binding	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_04387	A	A2S	Potri.001G435200	Potri.001G435200(AS) Potri.001G432000(BS)	POPTR_0001s42620	NA	NA	AT4G02260.3	| Symbols: RSH1, AT-RSH1 | RELA/SPOT homolog 1 | chr4:985451-990697 FORWARD LENGTH=816	LOC_Os03g22160.1	protein|relA-SpoT like protein RSH1, putative, expressed	NA	NA	GO:0009611|response to wounding GO:0015969|guanosine tetraphosphate metabolic process	GO:0003824|catalytic activity GO:0008081|phosphoric diester hydrolase activity GO:0046872|metal ion binding	GO:0005737|cytoplasm GO:0009507|chloroplast
pt2_04388	A	A4S	Potri.001G430000	Potri.001G430000(AS) Potri.T066000(BS) Potri.001G429200(BS) Potri.001G435300(BS)	POPTR_0001s42630	sp|Q0IHH1|NAA30_XENLA	N-alpha-acetyltransferase 30 OS=Xenopus laevis GN=naa30 PE=2 SV=1	AT2G38130.2	| Symbols: ATMAK3 | Acyl-CoA N-acyltransferases (NAT) superfamily protein | chr2:15978639-15980145 REVERSE LENGTH=190	LOC_Os11g32280.1	protein|acetyltransferase, GNAT family, putative, expressed	IMGA|Medtr5g098790.1	N-acetyltransferase NAT13 chr5 42227632-42224778 F EGN_Mt100125 20111014	GO:0001676|long-chain fatty acid metabolic process GO:0002213|defense response to insect GO:0006301|postreplication repair GO:0006633|fatty acid biosynthetic process GO:0008152|metabolic process	GO:0008080|N-acetyltransferase activity	GO:0005737|cytoplasm
pt2_04389	A	A2S	Potri.001G430100	Potri.001G430100(AS) Potri.001G435400(AS)	POPTR_0001s42640	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006499|N-terminal protein myristoylation GO:0006979|response to oxidative stress	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04390	A	A3S	Potri.001G435500	Potri.001G435500(AS) Potri.001G430200(AS) Potri.011G139500(DS)	POPTR_0001s42650	sp|Q567B1|OTU1_DANRE	Ubiquitin thioesterase OTU1 OS=Danio rerio GN=yod1 PE=2 SV=1	AT1G50670.1	| Symbols: | OTU-like cysteine protease family protein | chr1:18775086-18776552 REVERSE LENGTH=208	LOC_Os02g06890.1	protein|OTU-like cysteine protease family protein, putative, expressed	IMGA|Medtr5g092720.1	Ubiquitin thioesterase OTU1 chr5 39462047-39458184 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0008234|cysteine-type peptidase activity	GO:0005829|cytosol
pt2_04391	C	C2S	Potri.001G435500	Potri.001G435500(CS) Potri.001G430200(CS)	sp|Q567B1|OTU1_DANRE	Ubiquitin thioesterase OTU1 OS=Danio rerio GN=yod1 PE=2 SV=1	AT1G50670.1	| Symbols: | OTU-like cysteine protease family protein | chr1:18775086-18776552 REVERSE LENGTH=208	LOC_Os02g06890.1	protein|OTU-like cysteine protease family protein, putative, expressed	IMGA|Medtr5g092720.1	Ubiquitin thioesterase OTU1 chr5 39462047-39458184 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0008234|cysteine-type peptidase activity	GO:0005829|cytosol
pt2_04392	A	A2S	Potri.001G435500	Potri.001G435500(AS) Potri.001G430200(AS)	POPTR_0001s42650	sp|Q567B1|OTU1_DANRE	Ubiquitin thioesterase OTU1 OS=Danio rerio GN=yod1 PE=2 SV=1	AT1G50670.1	| Symbols: | OTU-like cysteine protease family protein | chr1:18775086-18776552 REVERSE LENGTH=208	LOC_Os02g06890.1	protein|OTU-like cysteine protease family protein, putative, expressed	IMGA|Medtr5g092720.1	Ubiquitin thioesterase OTU1 chr5 39462047-39458184 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0008234|cysteine-type peptidase activity	GO:0005829|cytosol
pt2_04393	A	A2S	Potri.001G435700	Potri.001G435700(AS) Potri.001G430300(AS)	POPTR_0001s42660	sp|P52758|UK114_HUMAN	Ribonuclease UK114 OS=Homo sapiens GN=HRSP12 PE=1 SV=1	AT3G20390.1	| Symbols: | endoribonuclease L-PSP family protein | chr3:7110227-7111695 REVERSE LENGTH=187	LOC_Os07g33240.1	protein|endoribonuclease, putative, expressed	IMGA|Medtr5g092740.1	Ribonuclease UK114 chr5 39467473-39464535 F EGN_Mt100125 20111014	GO:0006094|gluconeogenesis GO:0006096|glycolysis GO:0009651|response to salt stress GO:0019761|glucosinolate biosynthetic process GO:0046686|response to cadmium ion	GO:0004521|endoribonuclease activity	GO:0005739|mitochondrion GO:0005773|vacuole GO:0009507|chloroplast GO:0009536|plastid GO:0009570|chloroplast stroma GO:0009579|thylakoid GO:0009941|chloroplast envelope
pt2_04394	A	A1S	Potri.001G435800	Potri.001G435800(AS)	POPTR_0001s42670	sp|Q8GT75|NIP1_ARATH	NEP1-interacting protein 1 OS=Arabidopsis thaliana GN=NIP1 PE=1 SV=2	AT3G20395.1	| Symbols: | RING/U-box superfamily protein | chr3:7112020-7113792 REVERSE LENGTH=223	LOC_Os10g39770.1	protein|zinc finger, C3HC4 type, domain containing protein, expressed	IMGA|Medtr5g092790.1	RING finger family protein chr5 39482034-39480555 E EGN_Mt100125 20111014	NA	GO:0008270|zinc ion binding	NA
pt2_04395	R	R	NA	NA	POPTR_0001s42680	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04396	C	C1S	Potri.001G436000	Potri.001G436000(CS)	NA	NA	AT5G05800.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 881 Blast hits to 512 proteins in 30 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 38; Plants - 833; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). | chr5:1743234-1744751 REVERSE LENGTH=449	NA	NA	NA	NA	GO:0008150|biological_process GO:0048573|photoperiodism, flowering	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_04397	A	A2S	Potri.001G430700	Potri.001G430700(AS) Potri.001G436100(BS)	POPTR_0001s42700	sp|Q9C7S7|ERO1_ARATH	Endoplasmic oxidoreductin-1 OS=Arabidopsis thaliana GN=AERO1 PE=1 SV=1	AT1G72280.1	| Symbols: AERO1, ERO1 | endoplasmic reticulum oxidoreductins 1 | chr1:27212039-27214506 REVERSE LENGTH=469	LOC_Os03g52340.1	protein|endoplasmic oxidoreductin-1 precursor, putative, expressed	NA	NA	GO:0006984|ER-nucleus signaling pathway GO:0034976|response to endoplasmic reticulum stress GO:0055114|oxidation-reduction process GO:0071216|cellular response to biotic stimulus	GO:0016671|oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor GO:0050660|flavin adenine dinucleotide binding	GO:0005634|nucleus GO:0005783|endoplasmic reticulum GO:0005789|endoplasmic reticulum membrane
pt2_04398	C	C2S	Potri.001G436100	Potri.001G436100(CS) Potri.001G430700(CS)	sp|Q9C7S7|ERO1_ARATH	Endoplasmic oxidoreductin-1 OS=Arabidopsis thaliana GN=AERO1 PE=1 SV=1	AT1G72280.1	| Symbols: AERO1, ERO1 | endoplasmic reticulum oxidoreductins 1 | chr1:27212039-27214506 REVERSE LENGTH=469	LOC_Os03g52340.1	protein|endoplasmic oxidoreductin-1 precursor, putative, expressed	NA	NA	GO:0006984|ER-nucleus signaling pathway GO:0034976|response to endoplasmic reticulum stress GO:0055114|oxidation-reduction process GO:0071216|cellular response to biotic stimulus	GO:0016671|oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor GO:0050660|flavin adenine dinucleotide binding	GO:0005634|nucleus GO:0005783|endoplasmic reticulum GO:0005789|endoplasmic reticulum membrane
pt2_04399	A	A2S	Potri.001G436200	Potri.001G436200(AS) Potri.001G430800(AS)	POPTR_0001s42710	sp|O81635|ATK4_ARATH	Kinesin-4 OS=Arabidopsis thaliana GN=ATK4 PE=1 SV=2	AT1G72250.2	| Symbols: | Di-glucose binding protein with Kinesin motor domain | chr1:27192902-27198118 FORWARD LENGTH=1203	LOC_Os12g42160.1	protein|kinesin motor domain containing protein, putative, expressed	IMGA|Medtr5g031470.1	Kinesin-4 chr5 13075037-13067334 E EGN_Mt100125 20111014	GO:0000226|microtubule cytoskeleton organization GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0006346|methylation-dependent chromatin silencing GO:0009909|regulation of flower development GO:0016458|gene silencing GO:0031047|gene silencing by RNA GO:0031048|chromatin silencing by small RNA GO:0034968|histone lysine methylation GO:0048451|petal formation GO:0048453|sepal formation GO:0051567|histone H3-K9 methylation	GO:0003777|microtubule motor activity GO:0005524|ATP binding	GO:0005737|cytoplasm
pt2_04400	A	A1S	Potri.001G436300	Potri.001G436300(AS)	POPTR_0001s42720	sp|Q9SHI1|IF2C_ARATH	Translation initiation factor IF-2, chloroplastic OS=Arabidopsis thaliana GN=At1g17220 PE=2 SV=2	AT1G17220.1	| Symbols: FUG1 | Translation initiation factor 2, small GTP-binding protein | chr1:5885383-5890165 FORWARD LENGTH=1026	LOC_Os05g49970.2	protein|translation initiation factor IF-2, chloroplast precursor, putative, expressed	IMGA|Medtr5g032140.1	Translation initiation factor IF-2 chr5 13379160-13374048 E EGN_Mt100125 20111014	GO:0006413|translational initiation GO:0009902|chloroplast relocation GO:0010027|thylakoid membrane organization GO:0010155|regulation of proton transport GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0034660|ncRNA metabolic process GO:0042793|transcription from plastid promoter GO:0046777|protein autophosphorylation	GO:0003743|translation initiation factor activity GO:0003924|GTPase activity GO:0005525|GTP binding	GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope
pt2_04401	A	A2S	Potri.001G431000	Potri.001G431000(AS) Potri.001G436400(AS)	POPTR_0001s42730	sp|B9GHX8|CSPL8_POPTR	CASP-like protein POPTRDRAFT_1070325 OS=Populus trichocarpa GN=POPTRDRAFT_1070325 PE=3 SV=1	AT1G17200.1	| Symbols: | Uncharacterised protein family (UPF0497) | chr1:5878493-5879871 FORWARD LENGTH=204	LOC_Os04g21320.1	protein|membrane associated DUF588 domain containing protein, putative, expressed	IMGA|Medtr5g076480.1	hypothetical protein chr5 31632937-31630871 F EGN_Mt100125 20111014	GO:0006949|syncytium formation GO:0080167|response to karrikin	GO:0005515|protein binding	NA
pt2_04402	A	A1S	Potri.001G431100	Potri.001G431100(AS)	POPTR_0001s42740	sp|P46417|GSTX3_SOYBN	Glutathione S-transferase 3 OS=Glycine max GN=GST3 PE=1 SV=1	AT1G78340.1	| Symbols: ATGSTU22, GSTU22 | glutathione S-transferase TAU 22 | chr1:29473046-29473797 REVERSE LENGTH=218	LOC_Os09g20220.1	protein|glutathione S-transferase, putative, expressed	IMGA|contig_11749_1.1	Glutathione S-transferase contig_11749 1966-870 E PREDN 20111014	GO:0009407|toxin catabolic process GO:0010583|response to cyclopentenone	GO:0004364|glutathione transferase activity	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_04403	A	A2S	Potri.001G436500	Potri.001G436500(AS) Potri.001G431200(AS)	POPTR_0001s42750	sp|Q03666|GSTX4_TOBAC	Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1	AT1G78380.1	| Symbols: ATGSTU19, GST8, GSTU19 | glutathione S-transferase TAU 19 | chr1:29486659-29487819 REVERSE LENGTH=219	LOC_Os09g20220.1	protein|glutathione S-transferase, putative, expressed	IMGA|contig_11749_1.1	Glutathione S-transferase contig_11749 1966-870 E PREDN 20111014	GO:0006094|gluconeogenesis GO:0006096|glycolysis GO:0006635|fatty acid beta-oxidation GO:0006979|response to oxidative stress GO:0009407|toxin catabolic process GO:0009651|response to salt stress GO:0010583|response to cyclopentenone GO:0016036|cellular response to phosphate starvation GO:0019375|galactolipid biosynthetic process GO:0042631|cellular response to water deprivation GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0046686|response to cadmium ion GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	GO:0004364|glutathione transferase activity GO:0043295|glutathione binding	GO:0005737|cytoplasm GO:0005774|vacuolar membrane GO:0005829|cytosol GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_04404	A	A6S	Potri.001G436600	Potri.001G436600(AS) Potri.001G437000(BS) Potri.001G431300(BS) Potri.001G431700(DS) Potri.001G436700(DS) Potri.001G431400(DS)	POPTR_0001s42760	sp|Q03666|GSTX4_TOBAC	Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1	AT1G78380.1	| Symbols: ATGSTU19, GST8, GSTU19 | glutathione S-transferase TAU 19 | chr1:29486659-29487819 REVERSE LENGTH=219	LOC_Os09g20220.1	protein|glutathione S-transferase, putative, expressed	IMGA|contig_11749_1.1	Glutathione S-transferase contig_11749 1966-870 E PREDN 20111014	GO:0006094|gluconeogenesis GO:0006096|glycolysis GO:0006635|fatty acid beta-oxidation GO:0006979|response to oxidative stress GO:0009407|toxin catabolic process GO:0009651|response to salt stress GO:0010583|response to cyclopentenone GO:0016036|cellular response to phosphate starvation GO:0019375|galactolipid biosynthetic process GO:0042631|cellular response to water deprivation GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0046686|response to cadmium ion GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	GO:0004364|glutathione transferase activity GO:0043295|glutathione binding	GO:0005737|cytoplasm GO:0005774|vacuolar membrane GO:0005829|cytosol GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_04405	A	A7S	Potri.001G431700	Potri.001G431700(AS) Potri.001G436700(AS) Potri.001G431400(AS) Potri.001G437000(DS) Potri.001G436800(DS) Potri.001G436600(DS) Potri.001G431600(DS)	POPTR_0001s42770	sp|Q03666|GSTX4_TOBAC	Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1	AT1G78380.1	| Symbols: ATGSTU19, GST8, GSTU19 | glutathione S-transferase TAU 19 | chr1:29486659-29487819 REVERSE LENGTH=219	LOC_Os09g20220.1	protein|glutathione S-transferase, putative, expressed	IMGA|contig_11749_1.1	Glutathione S-transferase contig_11749 1966-870 E PREDN 20111014	GO:0006094|gluconeogenesis GO:0006096|glycolysis GO:0006635|fatty acid beta-oxidation GO:0006979|response to oxidative stress GO:0009407|toxin catabolic process GO:0009651|response to salt stress GO:0010583|response to cyclopentenone GO:0016036|cellular response to phosphate starvation GO:0019375|galactolipid biosynthetic process GO:0042631|cellular response to water deprivation GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0046686|response to cadmium ion GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	GO:0004364|glutathione transferase activity GO:0043295|glutathione binding	GO:0005737|cytoplasm GO:0005774|vacuolar membrane GO:0005829|cytosol GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_04406	A	A5S	Potri.001G436800	Potri.001G436800(AS) Potri.001G431600(AS) Potri.001G431700(BS) Potri.001G436700(BS) Potri.001G431400(BS)	POPTR_0001s42780	sp|Q03666|GSTX4_TOBAC	Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1	AT1G17180.1	| Symbols: ATGSTU25, GSTU25 | glutathione S-transferase TAU 25 | chr1:5872208-5872958 FORWARD LENGTH=221	LOC_Os09g20220.1	protein|glutathione S-transferase, putative, expressed	IMGA|contig_11749_1.1	Glutathione S-transferase contig_11749 1966-870 E PREDN 20111014	GO:0009407|toxin catabolic process GO:0010583|response to cyclopentenone	GO:0004364|glutathione transferase activity	GO:0005737|cytoplasm
pt2_04407	A	A2S	Potri.001G437000	Potri.001G437000(AS) Potri.001G437100(DS)	POPTR_0001s42790	sp|Q03666|GSTX4_TOBAC	Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1	AT1G78380.1	| Symbols: ATGSTU19, GST8, GSTU19 | glutathione S-transferase TAU 19 | chr1:29486659-29487819 REVERSE LENGTH=219	LOC_Os09g20220.1	protein|glutathione S-transferase, putative, expressed	IMGA|contig_11749_1.1	Glutathione S-transferase contig_11749 1966-870 E PREDN 20111014	GO:0006094|gluconeogenesis GO:0006096|glycolysis GO:0006635|fatty acid beta-oxidation GO:0006979|response to oxidative stress GO:0009407|toxin catabolic process GO:0009651|response to salt stress GO:0010583|response to cyclopentenone GO:0016036|cellular response to phosphate starvation GO:0019375|galactolipid biosynthetic process GO:0042631|cellular response to water deprivation GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0046686|response to cadmium ion GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	GO:0004364|glutathione transferase activity GO:0043295|glutathione binding	GO:0005737|cytoplasm GO:0005774|vacuolar membrane GO:0005829|cytosol GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_04408	A	A1S	Potri.001G437200	Potri.001G437200(AS)	POPTR_0001s42800	sp|Q03666|GSTX4_TOBAC	Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1	AT1G78380.1	| Symbols: ATGSTU19, GST8, GSTU19 | glutathione S-transferase TAU 19 | chr1:29486659-29487819 REVERSE LENGTH=219	LOC_Os09g20220.1	protein|glutathione S-transferase, putative, expressed	IMGA|contig_11749_1.1	Glutathione S-transferase contig_11749 1966-870 E PREDN 20111014	GO:0006094|gluconeogenesis GO:0006096|glycolysis GO:0006635|fatty acid beta-oxidation GO:0006979|response to oxidative stress GO:0009407|toxin catabolic process GO:0009651|response to salt stress GO:0010583|response to cyclopentenone GO:0016036|cellular response to phosphate starvation GO:0019375|galactolipid biosynthetic process GO:0042631|cellular response to water deprivation GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0046686|response to cadmium ion GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	GO:0004364|glutathione transferase activity GO:0043295|glutathione binding	GO:0005737|cytoplasm GO:0005774|vacuolar membrane GO:0005829|cytosol GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_04409	C	C1S	Potri.001G437300	Potri.001G437300(CS)	sp|Q8GYM1|GSTUM_ARATH	Glutathione S-transferase U22 OS=Arabidopsis thaliana GN=GSTU22 PE=2 SV=1	AT1G78340.1	| Symbols: ATGSTU22, GSTU22 | glutathione S-transferase TAU 22 | chr1:29473046-29473797 REVERSE LENGTH=218	LOC_Os09g20220.1	protein|glutathione S-transferase, putative, expressed	IMGA|contig_11749_1.1	Glutathione S-transferase contig_11749 1966-870 E PREDN 20111014	GO:0009407|toxin catabolic process GO:0010583|response to cyclopentenone	GO:0004364|glutathione transferase activity	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_04410	A	A3S	Potri.001G437400	Potri.001G437400(AS) Potri.011G140800(DS) Potri.001G437500(DS)	POPTR_0001s42820	sp|Q03666|GSTX4_TOBAC	Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1	AT1G78380.1	| Symbols: ATGSTU19, GST8, GSTU19 | glutathione S-transferase TAU 19 | chr1:29486659-29487819 REVERSE LENGTH=219	LOC_Os09g20220.1	protein|glutathione S-transferase, putative, expressed	IMGA|contig_11749_1.1	Glutathione S-transferase contig_11749 1966-870 E PREDN 20111014	GO:0006094|gluconeogenesis GO:0006096|glycolysis GO:0006635|fatty acid beta-oxidation GO:0006979|response to oxidative stress GO:0009407|toxin catabolic process GO:0009651|response to salt stress GO:0010583|response to cyclopentenone GO:0016036|cellular response to phosphate starvation GO:0019375|galactolipid biosynthetic process GO:0042631|cellular response to water deprivation GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0046686|response to cadmium ion GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	GO:0004364|glutathione transferase activity GO:0043295|glutathione binding	GO:0005737|cytoplasm GO:0005774|vacuolar membrane GO:0005829|cytosol GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_04411	A	A10S	Potri.001G437500	Potri.001G437500(AS) Potri.001G437100(BS) Potri.001G436800(BS) Potri.001G436600(BS) Potri.001G437400(BS) Potri.001G431400(BS) Potri.001G437200(BS) Potri.001G431600(BS) Potri.001G431300(BS) Potri.001G436700(DS)	POPTR_0001s42830	sp|P49332|GSTXC_TOBAC	Probable glutathione S-transferase parC OS=Nicotiana tabacum GN=PARC PE=2 SV=1	AT1G17180.1	| Symbols: ATGSTU25, GSTU25 | glutathione S-transferase TAU 25 | chr1:5872208-5872958 FORWARD LENGTH=221	LOC_Os09g20220.1	protein|glutathione S-transferase, putative, expressed	IMGA|contig_11749_1.1	Glutathione S-transferase contig_11749 1966-870 E PREDN 20111014	GO:0000023|maltose metabolic process GO:0006569|tryptophan catabolic process GO:0009407|toxin catabolic process GO:0009684|indoleacetic acid biosynthetic process GO:0019252|starch biosynthetic process GO:0043085|positive regulation of catalytic activity GO:2000030|regulation of response to red or far red light	GO:0004364|glutathione transferase activity GO:0019899|enzyme binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0009507|chloroplast GO:0048046|apoplast
pt2_04412	A	A2S	Potri.001G437600	Potri.001G437600(AS) Potri.001G437800(AS)	POPTR_0001s42840	sp|Q9C9H7|RLP12_ARATH	Receptor-like protein 12 OS=Arabidopsis thaliana GN=RLP12 PE=2 SV=2	AT2G32660.1	| Symbols: AtRLP22, RLP22 | receptor like protein 22 | chr2:13853897-13855666 REVERSE LENGTH=589	LOC_Os01g04070.1	protein|verticillium wilt disease resistance protein, putative, expressed	IMGA|Medtr5g063760.1	Receptor protein kinase-like protein chr5 25741573-25739289 E EGN_Mt100125 20111014	GO:0006952|defense response GO:0007165|signal transduction	GO:0016301|kinase activity	GO:0005886|plasma membrane
pt2_04413	G	G1	NA	NA	POPTR_0001s42850	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04414	A	A1S	Potri.001G437700	Potri.001G437700(AS)	POPTR_0001s42860	sp|Q9C9H7|RLP12_ARATH	Receptor-like protein 12 OS=Arabidopsis thaliana GN=RLP12 PE=2 SV=2	AT1G47890.1	| Symbols: AtRLP7, RLP7 | receptor like protein 7 | chr1:17643976-17647035 FORWARD LENGTH=1019	LOC_Os04g40440.1	protein|expressed protein	IMGA|Medtr5g087320.1	Receptor-like protein kinase chr5 36814074-36811012 H EGN_Mt100125 20111014	GO:0002237|response to molecule of bacterial origin GO:0006952|defense response GO:0007165|signal transduction GO:0010103|stomatal complex morphogenesis GO:0048443|stamen development	GO:0016301|kinase activity	NA
pt2_04415	B	B2S	Potri.001G437800	Potri.001G437800(BS) Potri.001G437600(DS)	POPTR_0001s42870	sp|Q9C9H7|RLP12_ARATH	Receptor-like protein 12 OS=Arabidopsis thaliana GN=RLP12 PE=2 SV=2	AT2G32660.1	| Symbols: AtRLP22, RLP22 | receptor like protein 22 | chr2:13853897-13855666 REVERSE LENGTH=589	LOC_Os01g04070.1	protein|verticillium wilt disease resistance protein, putative, expressed	IMGA|Medtr5g086980.1	Receptor-like protein kinase chr5 36638064-36608560 H EGN_Mt100125 20111014	GO:0006952|defense response GO:0007165|signal transduction	GO:0016301|kinase activity	GO:0005575|cellular_component GO:0005886|plasma membrane
pt2_04416	A	A2S	Potri.001G437600	Potri.001G437600(AS) Potri.001G437800(AS)	POPTR_0001s42880	sp|Q9C9H7|RLP12_ARATH	Receptor-like protein 12 OS=Arabidopsis thaliana GN=RLP12 PE=2 SV=2	AT2G32660.1	| Symbols: AtRLP22, RLP22 | receptor like protein 22 | chr2:13853897-13855666 REVERSE LENGTH=589	LOC_Os01g04070.1	protein|verticillium wilt disease resistance protein, putative, expressed	IMGA|Medtr5g063760.1	Receptor protein kinase-like protein chr5 25741573-25739289 E EGN_Mt100125 20111014	GO:0006952|defense response GO:0007165|signal transduction	GO:0016301|kinase activity	GO:0005886|plasma membrane
pt2_04417	D	D3S	Potri.001G441300	Potri.001G441300(DS) Potri.T098100(DS) Potri.001G442000(DS)	POPTR_0001s42890	sp|Q9SXB8|Y1133_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 OS=Arabidopsis thaliana GN=At1g11330 PE=1 SV=3	AT1G11330.1	| Symbols: | S-locus lectin protein kinase family protein | chr1:3810372-3813416 FORWARD LENGTH=840	LOC_Os01g57480.1	protein|serine/threonine-protein kinase receptor precursor, putative, expressed	IMGA|Medtr1g081670.1	Serine/threonine protein kinase chr1 20876035-20870289 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_04418	G	G3	NA	NA	POPTR_0001s42900	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04419	A	A1S	Potri.001G438000	Potri.001G438000(AS)	POPTR_0001s42910	sp|Q9C9H7|RLP12_ARATH	Receptor-like protein 12 OS=Arabidopsis thaliana GN=RLP12 PE=2 SV=2	AT2G33080.1	| Symbols: AtRLP28, RLP28 | receptor like protein 28 | chr2:14032015-14034237 FORWARD LENGTH=740	LOC_Os01g04070.1	protein|verticillium wilt disease resistance protein, putative, expressed	IMGA|Medtr5g063760.1	Receptor protein kinase-like protein chr5 25741573-25739289 E EGN_Mt100125 20111014	GO:0007165|signal transduction	NA	GO:0005886|plasma membrane
pt2_04420	A	A1S	Potri.001G438100	Potri.001G438100(AS)	POPTR_0001s42920	sp|P0C8L4|Y4648_ARATH	Uncharacterized protein At4g26485 OS=Arabidopsis thaliana GN=At4g26485 PE=4 SV=1	AT1G55790.1	| Symbols: | Domain of unknown function (DUF2431) | chr1:20852685-20856069 REVERSE LENGTH=515	LOC_Os09g30200.1	protein|ATP binding protein, putative, expressed	IMGA|Medtr5g093740.1	hypothetical protein chr5 39890018-39892702 H EGN_Mt100125 20111014	GO:0030001|metal ion transport	GO:0046872|metal ion binding	GO:0005634|nucleus
pt2_04421	G	G1	NA	NA	POPTR_0001s42930	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04422	A	A2S	Potri.001G438300	Potri.001G438300(AS) Potri.001G438400(AA)	POPTR_0001s42940	sp|Q6Y2X3|DJC14_HUMAN	DnaJ homolog subfamily C member 14 OS=Homo sapiens GN=DNAJC14 PE=2 SV=2	AT1G79030.1	| Symbols: | Chaperone DnaJ-domain superfamily protein | chr1:29730922-29733570 REVERSE LENGTH=561	LOC_Os12g41820.1	protein|heat shock protein DnaJ, putative, expressed	NA	NA	GO:0006457|protein folding	GO:0031072|heat shock protein binding GO:0051082|unfolded protein binding	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_04423	B	B2S	Potri.001G438400	Potri.001G438400(BS) Potri.001G438300(BA)	POPTR_0001s42950	sp|C0LGH2|Y1561_ARATH	Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2	AT1G16670.1	| Symbols: | Protein kinase superfamily protein | chr1:5697846-5699492 FORWARD LENGTH=390	LOC_Os02g06930.2	protein|protein kinase, putative, expressed	IMGA|Medtr5g091950.1	BED finger-nbs resistance protein chr5 39093432-39086414 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process GO:0009863|salicylic acid mediated signaling pathway GO:0030968|endoplasmic reticulum unfolded protein response GO:0031348|negative regulation of defense response GO:0045087|innate immune response GO:0046777|protein autophosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005575|cellular_component GO:0005886|plasma membrane
pt2_04424	A	A1S	Potri.001G438500	Potri.001G438500(AS)	POPTR_0001s42960	NA	NA	AT1G56000.1	| Symbols: | FAD/NAD(P)-binding oxidoreductase family protein | chr1:20944149-20946101 FORWARD LENGTH=384	LOC_Os03g57070.2	protein|amine oxidase-related, putative, expressed	NA	NA	GO:0008150|biological_process GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04425	A	A1S	Potri.001G438700	Potri.001G438700(AS)	POPTR_0001s42970	sp|P06183|PSBR_SOLTU	Photosystem II 10 kDa polypeptide, chloroplastic OS=Solanum tuberosum GN=PSBR PE=2 SV=1	AT1G79040.1	| Symbols: PSBR | photosystem II subunit R | chr1:29736085-29736781 FORWARD LENGTH=140	LOC_Os07g05365.1	protein|photosystem II 10 kDa polypeptide, chloroplast precursor, putative, expressed	NA	NA	GO:0009637|response to blue light GO:0009644|response to high light intensity GO:0009744|response to sucrose stimulus GO:0010114|response to red light GO:0010155|regulation of proton transport GO:0010218|response to far red light GO:0010270|photosystem II oxygen evolving complex assembly GO:0015979|photosynthesis GO:0019344|cysteine biosynthetic process	GO:0005515|protein binding	GO:0009507|chloroplast GO:0009523|photosystem II GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009579|thylakoid GO:0009654|oxygen evolving complex GO:0042651|thylakoid membrane
pt2_04426	A	A1S	Potri.001G438800	Potri.001G438800(AS)	POPTR_0001s42980	sp|Q40519|PSBR_TOBAC	Photosystem II 10 kDa polypeptide, chloroplastic OS=Nicotiana tabacum GN=PSBR PE=2 SV=1	AT1G79040.1	| Symbols: PSBR | photosystem II subunit R | chr1:29736085-29736781 FORWARD LENGTH=140	LOC_Os07g05365.1	protein|photosystem II 10 kDa polypeptide, chloroplast precursor, putative, expressed	NA	NA	GO:0009637|response to blue light GO:0009644|response to high light intensity GO:0009744|response to sucrose stimulus GO:0010114|response to red light GO:0010155|regulation of proton transport GO:0010218|response to far red light GO:0010270|photosystem II oxygen evolving complex assembly GO:0015979|photosynthesis GO:0019344|cysteine biosynthetic process	GO:0005515|protein binding	GO:0009507|chloroplast GO:0009523|photosystem II GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009579|thylakoid GO:0009654|oxygen evolving complex GO:0042651|thylakoid membrane
pt2_04427	A	A1S	Potri.001G438900	Potri.001G438900(AS)	POPTR_0001s42990	sp|Q39199|RECAC_ARATH	DNA repair protein recA homolog 1, chloroplastic OS=Arabidopsis thaliana GN=RECA PE=2 SV=1	AT1G79050.1	| Symbols: | recA DNA recombination family protein | chr1:29737084-29740140 REVERSE LENGTH=439	LOC_Os03g43850.1	protein|recA protein, putative, expressed	IMGA|contig_239766_1.1	Protein recA contig_239766 518-1492 E PREDN 20111014	GO:0006281|DNA repair GO:0006310|DNA recombination GO:0006974|response to DNA damage stimulus GO:0007131|reciprocal meiotic recombination GO:0009432|SOS response GO:0009691|cytokinin biosynthetic process	GO:0000166|nucleotide binding GO:0003677|DNA binding GO:0003697|single-stranded DNA binding GO:0005524|ATP binding GO:0008094|DNA-dependent ATPase activity GO:0017111|nucleoside-triphosphatase activity	NA
pt2_04428	A	A1S	Potri.001G439000	Potri.001G439000(AS)	POPTR_0001s43000	sp|Q8QFR4|MD2L2_XENLA	Mitotic spindle assembly checkpoint protein MAD2B OS=Xenopus laevis GN=mad2l2 PE=1 SV=1	AT1G16590.1	| Symbols: REV7, ATREV7 | DNA-binding HORMA family protein | chr1:5673886-5674890 FORWARD LENGTH=215	NA	NA	NA	NA	GO:0006974|response to DNA damage stimulus GO:0007094|mitotic cell cycle spindle assembly checkpoint GO:0010224|response to UV-B	GO:0003677|DNA binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04429	A	A1S	Potri.001G439100	Potri.001G439100(AS)	POPTR_0001s43010	NA	NA	AT1G79120.1	| Symbols: | Ubiquitin carboxyl-terminal hydrolase family protein | chr1:29767314-29768555 REVERSE LENGTH=413	LOC_Os03g46460.1	protein|ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed	IMGA|Medtr1g072550.1	hypothetical protein chr1 18188103-18185295 E EGN_Mt100125 20111014	NA	NA	GO:0005739|mitochondrion
pt2_04430	A	A2S	Potri.001G439600	Potri.001G439600(AS) Potri.001G439200(AS)	POPTR_0001s43020	NA	NA	AT3G12920.1	| Symbols: | SBP (S-ribonuclease binding protein) family protein | chr3:4122127-4123323 REVERSE LENGTH=335	LOC_Os03g46570.1	protein|protein binding protein, putative, expressed	IMGA|Medtr5g013690.1	Baculoviral IAP repeat-containing protein chr5 4147917-4149745 F EGN_Mt100125 20111014	GO:0043067|regulation of programmed cell death	GO:0008270|zinc ion binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_04431	A	A4S	Potri.001G439400	Potri.001G439400(AS) Potri.001G439800(AS) Potri.001G439900(DS) Potri.001G439500(DS)	POPTR_0001s43030	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_04432	A	A3S	Potri.001G439900	Potri.001G439900(AS) Potri.001G439500(AS) Potri.001G439800(BS)	POPTR_0001s43040	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04433	A	A1S	Potri.001G440000	Potri.001G440000(AS)	POPTR_0001s43050	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04434	A	A1S	Potri.001G440100	Potri.001G440100(AS)	POPTR_0001s43060	sp|P27048|RSMB_MOUSE	Small nuclear ribonucleoprotein-associated protein B OS=Mus musculus GN=Snrpb PE=1 SV=1	AT4G20440.4	| Symbols: | small nuclear ribonucleoprotein associated protein B | chr4:11022843-11023616 REVERSE LENGTH=257	LOC_Os07g07220.1	protein|LSM domain containing protein, expressed	IMGA|Medtr5g092010.1	Small nuclear ribonucleoprotein-associated protein B chr5 39136475-39129784 F EGN_Mt100125 20111014	NA	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005730|nucleolus GO:0005732|small nucleolar ribonucleoprotein complex
pt2_04435	A	A2S	Potri.001G440200	Potri.001G440200(AS) Potri.011G155600(DS)	POPTR_0001s43070	sp|Q50EK0|C16B2_PICSI	Cytochrome P450 716B2 OS=Picea sitchensis GN=CYP716B2 PE=2 SV=1	AT5G36110.1	| Symbols: CYP716A1 | cytochrome P450, family 716, subfamily A, polypeptide 1 | chr5:14195377-14197613 FORWARD LENGTH=477	LOC_Os07g33580.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g092150.1	Taxane 13-alpha-hydroxylase chr5 39206359-39203675 E EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005576|extracellular region
pt2_04436	A	A1S	Potri.001G440300	Potri.001G440300(AS)	POPTR_0001s43080	sp|O65351|SUBL_ARATH	Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1	AT4G20430.1	| Symbols: | Subtilase family protein | chr4:11017656-11021105 REVERSE LENGTH=856	LOC_Os01g56320.1	protein|OsSub4 - Putative Subtilisin homologue, expressed	IMGA|Medtr5g025010.1	Subtilisin-like protease chr5 9863093-9866617 E EGN_Mt100125 20111014	GO:0006508|proteolysis GO:0008152|metabolic process GO:0043086|negative regulation of catalytic activity	GO:0004252|serine-type endopeptidase activity GO:0042802|identical protein binding	GO:0005576|extracellular region GO:0005618|cell wall
pt2_04437	A	A1S	Potri.001G440400	Potri.001G440400(AS)	POPTR_0001s43090	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04438	G	G1	NA	NA	POPTR_0001s43100	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04439	A	A1S	Potri.001G440600	Potri.001G440600(AS)	POPTR_0001s43110	sp|Q9SPE5|SNAG_ARATH	Gamma-soluble NSF attachment protein OS=Arabidopsis thaliana GN=GSNAP PE=2 SV=1	AT4G20410.1	| Symbols: GSNAP, GAMMA-SNAP | gamma-soluble NSF attachment protein | chr4:11014099-11016454 REVERSE LENGTH=291	LOC_Os04g52760.1	protein|gamma-soluble NSF attachment protein, putative, expressed	IMGA|Medtr1g091730.1	Gamma-soluble NSF attachment protein chr1 25477596-25482875 H EGN_Mt100125 20111014	GO:0006886|intracellular protein transport	GO:0005215|transporter activity	GO:0005783|endoplasmic reticulum GO:0005794|Golgi apparatus GO:0005886|plasma membrane
pt2_04440	A	A1S	Potri.001G440700	Potri.001G440700(AS)	POPTR_0001s43120	sp|Q9SVG4|RETOL_ARATH	Reticuline oxidase-like protein OS=Arabidopsis thaliana GN=At4g20830 PE=1 SV=2	AT4G20820.1	| Symbols: | FAD-binding Berberine family protein | chr4:11150160-11151758 FORWARD LENGTH=532	LOC_Os06g35650.1	protein|reticuline oxidase-like protein precursor, putative, expressed	IMGA|contig_77107_1.1	(S)-reticuline oxidase-like protein contig_77107 1833-1018 H PREDN 20111014	GO:0055114|oxidation-reduction process	GO:0003824|catalytic activity GO:0008762|UDP-N-acetylmuramate dehydrogenase activity GO:0009055|electron carrier activity GO:0016491|oxidoreductase activity GO:0016614|oxidoreductase activity, acting on CH-OH group of donors GO:0050660|flavin adenine dinucleotide binding	GO:0005618|cell wall GO:0005737|cytoplasm GO:0009506|plasmodesma
pt2_04441	A	A2S	Potri.001G440800	Potri.001G440800(AS) Potri.T118500(AS)	POPTR_0001s43130	NA	NA	AT1G30800.1	| Symbols: | Fasciclin-like arabinogalactan family protein | chr1:10936995-10937714 FORWARD LENGTH=239	NA	NA	NA	NA	NA	GO:0003674|molecular_function	GO:0005576|extracellular region GO:0031225|anchored to membrane
pt2_04442	A	A2S	Potri.001G440900	Potri.001G440900(AS) Potri.T118600(DS)	POPTR_0001s43140	sp|Q8GUI6|JMJ14_ARATH	Probable lysine-specific demethylase JMJ14 OS=Arabidopsis thaliana GN=JMJ14 PE=1 SV=1	AT1G30810.2	| Symbols: | Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein | chr1:10938139-10941505 REVERSE LENGTH=819	LOC_Os05g23670.1	protein|transcription factor jumonji, putative, expressed	IMGA|Medtr5g010300.3	Lysine-specific demethylase 5D chr5 2474270-2496453 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0048573|photoperiodism, flowering	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0032453|histone demethylase activity (H3-K4 specific)	GO:0005634|nucleus
pt2_04443	A	A1S	Potri.001G441100	Potri.001G441100(AS)	POPTR_0001s43150	sp|Q9ZR08|Y4230_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 OS=Arabidopsis thaliana GN=At4g03230 PE=2 SV=3	AT4G03230.1	| Symbols: | S-locus lectin protein kinase family protein | chr4:1419278-1422828 REVERSE LENGTH=1010	LOC_Os04g54190.1	protein|cysteine-rich receptor-like protein kinase 8 precursor, putative, expressed	IMGA|Medtr1g081670.1	Serine/threonine protein kinase chr1 20876035-20870289 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0048544|recognition of pollen	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_04444	C	C1S	Potri.001G441200	Potri.001G441200(CS)	sp|Q9LW83|CE101_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase CES101 OS=Arabidopsis thaliana GN=CES101 PE=2 SV=2	AT3G16030.1	| Symbols: CES101 | lectin protein kinase family protein | chr3:5439609-5442802 FORWARD LENGTH=850	LOC_Os01g57480.1	protein|serine/threonine-protein kinase receptor precursor, putative, expressed	IMGA|Medtr1g081670.1	Serine/threonine protein kinase chr1 20876035-20870289 H EGN_Mt100125 20111014	GO:0002679|respiratory burst involved in defense response GO:0006468|protein phosphorylation GO:0006612|protein targeting to membrane GO:0006944|cellular membrane fusion GO:0006979|response to oxidative stress GO:0009611|response to wounding GO:0009863|salicylic acid mediated signaling pathway GO:0010200|response to chitin GO:0010363|regulation of plant-type hypersensitive response GO:0043069|negative regulation of programmed cell death GO:0048544|recognition of pollen GO:0050832|defense response to fungus	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_04445	A	A1S	Potri.001G441300	Potri.001G441300(AS)	POPTR_0001s43170	sp|Q9SXB8|Y1133_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 OS=Arabidopsis thaliana GN=At1g11330 PE=1 SV=3	AT1G11330.1	| Symbols: | S-locus lectin protein kinase family protein | chr1:3810372-3813416 FORWARD LENGTH=840	LOC_Os01g57480.1	protein|serine/threonine-protein kinase receptor precursor, putative, expressed	IMGA|Medtr1g081670.1	Serine/threonine protein kinase chr1 20876035-20870289 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_04446	A	A10S	Potri.T097300	Potri.T097300(AS) Potri.T098100(AS) Potri.001G441800(AS) Potri.001G441200(AS) Potri.T098200(AS) Potri.001G442100(AS) Potri.001G442000(AS) Potri.001G441400(AS) Potri.T097800(DS) Potri.001G437900(DS)	POPTR_0001s43180	sp|Q9SXB8|Y1133_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 OS=Arabidopsis thaliana GN=At1g11330 PE=1 SV=3	AT1G11330.1	| Symbols: | S-locus lectin protein kinase family protein | chr1:3810372-3813416 FORWARD LENGTH=840	LOC_Os01g57480.1	protein|serine/threonine-protein kinase receptor precursor, putative, expressed	IMGA|Medtr1g081670.1	Serine/threonine protein kinase chr1 20876035-20870289 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0048544|recognition of pollen	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_04447	A	A4S	Potri.001G441500	Potri.001G441500(AS) Potri.T097400(AS) Potri.T098200(BS) Potri.001G437900(DS)	POPTR_0001s43190	sp|O64793|Y1675_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase At1g67520 OS=Arabidopsis thaliana GN=At1g67520 PE=2 SV=3	AT5G18470.1	| Symbols: | Curculin-like (mannose-binding) lectin family protein | chr5:6127952-6129193 FORWARD LENGTH=413	LOC_Os04g54140.1	protein|receptor-like kinase, putative, expressed	IMGA|Medtr1g081670.1	Serine/threonine protein kinase chr1 20876035-20870289 H EGN_Mt100125 20111014	GO:0080167|response to karrikin	GO:0030246|carbohydrate binding	GO:0005886|plasma membrane GO:0009505|plant-type cell wall
pt2_04448	A	A2S	Potri.001G441600	Potri.001G441600(AS) Potri.T097500(AS)	POPTR_0001s43200	sp|O81906|B120_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase B120 OS=Arabidopsis thaliana GN=B120 PE=1 SV=1	AT4G21390.1	| Symbols: B120 | S-locus lectin protein kinase family protein | chr4:11394458-11397474 REVERSE LENGTH=849	LOC_Os01g57480.1	protein|serine/threonine-protein kinase receptor precursor, putative, expressed	IMGA|Medtr5g067310.1	Serine/threonine protein kinase chr5 27450376-27453491 H EGN_Mt100125 20111014	GO:0002679|respiratory burst involved in defense response GO:0006468|protein phosphorylation GO:0006612|protein targeting to membrane GO:0006944|cellular membrane fusion GO:0006979|response to oxidative stress GO:0009611|response to wounding GO:0009863|salicylic acid mediated signaling pathway GO:0010200|response to chitin GO:0010363|regulation of plant-type hypersensitive response GO:0043069|negative regulation of programmed cell death GO:0048544|recognition of pollen GO:0050832|defense response to fungus	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_04449	C	C1S	Potri.T097600	Potri.T097600(CS)	sp|O81906|B120_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase B120 OS=Arabidopsis thaliana GN=B120 PE=1 SV=1	AT4G21390.1	| Symbols: B120 | S-locus lectin protein kinase family protein | chr4:11394458-11397474 REVERSE LENGTH=849	LOC_Os07g36590.1	protein|serine/threonine-protein kinase receptor precursor, putative, expressed	IMGA|contig_58312_1.1	Receptor-like protein kinase contig_58312 4100-921 H PREDN 20111014	GO:0002679|respiratory burst involved in defense response GO:0006468|protein phosphorylation GO:0006612|protein targeting to membrane GO:0006944|cellular membrane fusion GO:0006979|response to oxidative stress GO:0009611|response to wounding GO:0009863|salicylic acid mediated signaling pathway GO:0010200|response to chitin GO:0010363|regulation of plant-type hypersensitive response GO:0043069|negative regulation of programmed cell death GO:0048544|recognition of pollen GO:0050832|defense response to fungus	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_04450	C	C1S	Potri.T097700	Potri.T097700(CS)	sp|Q9LW83|CE101_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase CES101 OS=Arabidopsis thaliana GN=CES101 PE=2 SV=2	AT5G18470.1	| Symbols: | Curculin-like (mannose-binding) lectin family protein | chr5:6127952-6129193 FORWARD LENGTH=413	LOC_Os01g06240.1	protein|protein kinase, putative, expressed	IMGA|Medtr1g081670.1	Serine/threonine protein kinase chr1 20876035-20870289 H EGN_Mt100125 20111014	GO:0080167|response to karrikin	GO:0030246|carbohydrate binding	GO:0005886|plasma membrane GO:0009505|plant-type cell wall
pt2_04451	A	A1A	Potri.T097700	Potri.T097700(AA)	POPTR_0001s43230	sp|Q9LW83|CE101_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase CES101 OS=Arabidopsis thaliana GN=CES101 PE=2 SV=2	AT5G18470.1	| Symbols: | Curculin-like (mannose-binding) lectin family protein | chr5:6127952-6129193 FORWARD LENGTH=413	LOC_Os01g06240.1	protein|protein kinase, putative, expressed	IMGA|Medtr1g081670.1	Serine/threonine protein kinase chr1 20876035-20870289 H EGN_Mt100125 20111014	GO:0080167|response to karrikin	GO:0030246|carbohydrate binding	GO:0005886|plasma membrane GO:0009505|plant-type cell wall
pt2_04452	A	A6S	Potri.001G441200	Potri.001G441200(AS) Potri.T097800(AS) Potri.001G441800(BS) Potri.T118800(BS) Potri.T098200(DS) Potri.001G442100(DS)	POPTR_0001s43240	sp|Q9LW83|CE101_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase CES101 OS=Arabidopsis thaliana GN=CES101 PE=2 SV=2	AT3G16030.1	| Symbols: CES101 | lectin protein kinase family protein | chr3:5439609-5442802 FORWARD LENGTH=850	LOC_Os01g57480.1	protein|serine/threonine-protein kinase receptor precursor, putative, expressed	IMGA|Medtr1g081670.1	Serine/threonine protein kinase chr1 20876035-20870289 H EGN_Mt100125 20111014	GO:0002679|respiratory burst involved in defense response GO:0006468|protein phosphorylation GO:0006612|protein targeting to membrane GO:0006944|cellular membrane fusion GO:0006979|response to oxidative stress GO:0009611|response to wounding GO:0009863|salicylic acid mediated signaling pathway GO:0010200|response to chitin GO:0010363|regulation of plant-type hypersensitive response GO:0043069|negative regulation of programmed cell death GO:0048544|recognition of pollen GO:0050832|defense response to fungus	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_04453	A	A2S	Potri.T097900	Potri.T097900(AS) Potri.001G441900(AS)	POPTR_0001s43250	sp|O64793|Y1675_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase At1g67520 OS=Arabidopsis thaliana GN=At1g67520 PE=2 SV=3	AT1G67520.1	| Symbols: | lectin protein kinase family protein | chr1:25303439-25305857 REVERSE LENGTH=587	LOC_Os04g54140.1	protein|receptor-like kinase, putative, expressed	IMGA|Medtr5g055070.1	Cysteine-rich receptor-like protein kinase chr5 22150681-22146797 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_04454	B	B11S	Potri.T097300	Potri.T097300(BS) Potri.T098100(BS) Potri.001G441800(BS) Potri.001G441200(BS) Potri.T098200(BS) Potri.001G442100(BS) Potri.T097800(BS) Potri.001G437900(BS) Potri.001G442000(BS) Potri.001G441400(BS) Potri.T118700(DS)	POPTR_0001s43260	sp|Q9SXB8|Y1133_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 OS=Arabidopsis thaliana GN=At1g11330 PE=1 SV=3	AT1G11330.1	| Symbols: | S-locus lectin protein kinase family protein | chr1:3810372-3813416 FORWARD LENGTH=840	LOC_Os01g57480.1	protein|serine/threonine-protein kinase receptor precursor, putative, expressed	IMGA|Medtr1g081670.1	Serine/threonine protein kinase chr1 20876035-20870289 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0048544|recognition of pollen	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_04455	A	A2S	Potri.T098200	Potri.T098200(AS) Potri.001G442100(AS)	POPTR_0001s43270	sp|Q9SXB8|Y1133_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 OS=Arabidopsis thaliana GN=At1g11330 PE=1 SV=3	AT1G11330.1	| Symbols: | S-locus lectin protein kinase family protein | chr1:3810372-3813416 FORWARD LENGTH=840	LOC_Os04g53998.1	protein|kinase, putative, expressed	IMGA|Medtr1g081670.1	Serine/threonine protein kinase chr1 20876035-20870289 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_04456	A	A1S	Potri.001G442200	Potri.001G442200(AS)	POPTR_0001s43280	sp|Q9LW83|CE101_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase CES101 OS=Arabidopsis thaliana GN=CES101 PE=2 SV=2	AT3G16030.1	| Symbols: CES101 | lectin protein kinase family protein | chr3:5439609-5442802 FORWARD LENGTH=850	LOC_Os01g57480.1	protein|serine/threonine-protein kinase receptor precursor, putative, expressed	IMGA|Medtr1g081670.1	Serine/threonine protein kinase chr1 20876035-20870289 H EGN_Mt100125 20111014	GO:0002679|respiratory burst involved in defense response GO:0006468|protein phosphorylation GO:0006612|protein targeting to membrane GO:0006944|cellular membrane fusion GO:0006979|response to oxidative stress GO:0009611|response to wounding GO:0009863|salicylic acid mediated signaling pathway GO:0010200|response to chitin GO:0010363|regulation of plant-type hypersensitive response GO:0043069|negative regulation of programmed cell death GO:0048544|recognition of pollen GO:0050832|defense response to fungus	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_04457	A	A1S	Potri.001G442300	Potri.001G442300(AS)	POPTR_0001s43290	sp|B9GIE4|CSPL5_POPTR	CASP-like protein POPTRDRAFT_798217 OS=Populus trichocarpa GN=POPTRDRAFT_798217 PE=3 SV=2	AT5G44550.1	| Symbols: | Uncharacterised protein family (UPF0497) | chr5:17942100-17943174 REVERSE LENGTH=197	LOC_Os12g41690.1	protein|membrane associated DUF588 domain containing protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0005515|protein binding	GO:0005576|extracellular region
pt2_04458	A	A1S	Potri.001G442400	Potri.001G442400(AS)	POPTR_0001s43300	sp|Q2QMB3|LOL2_ORYSJ	Protein LOL2 OS=Oryza sativa subsp. japonica GN=LOL2 PE=2 SV=1	AT4G20380.7	| Symbols: LSD1 | LSD1 zinc finger family protein | chr4:11005012-11006438 FORWARD LENGTH=189	LOC_Os12g41700.1	protein|LSD1 zinc finger domain containing protein, expressed	NA	NA	GO:0000303|response to superoxide GO:0001666|response to hypoxia GO:0002240|response to molecule of oomycetes origin GO:0006914|autophagy GO:0008219|cell death GO:0009626|plant-type hypersensitive response GO:0009651|response to salt stress GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009743|response to carbohydrate stimulus GO:0009751|response to salicylic acid stimulus GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009863|salicylic acid mediated signaling pathway GO:0009873|ethylene mediated signaling pathway GO:0010104|regulation of ethylene mediated signaling pathway GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010602|regulation of 1-aminocyclopropane-1-carboxylate metabolic process GO:0010618|aerenchyma formation GO:0043067|regulation of programmed cell death GO:0043069|negative regulation of programmed cell death	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005576|extracellular region
pt2_04459	C	C1S	Potri.001G442500	Potri.001G442500(CS)	sp|Q0WTY4|VPS2B_ARATH	Vacuolar protein sorting-associated protein 2 homolog 2 OS=Arabidopsis thaliana GN=VPS2.2 PE=1 SV=2	AT5G44560.1	| Symbols: VPS2.2 | SNF7 family protein | chr5:17946081-17948222 FORWARD LENGTH=222	LOC_Os03g43860.1	protein|SNF7 domain containing protein, putative, expressed	NA	NA	GO:0000226|microtubule cytoskeleton organization GO:0006260|DNA replication GO:0006306|DNA methylation GO:0008283|cell proliferation GO:0015031|protein transport GO:0016192|vesicle-mediated transport GO:0016572|histone phosphorylation GO:0051567|histone H3-K9 methylation	GO:0005515|protein binding	GO:0000815|ESCRT III complex GO:0005634|nucleus
pt2_04460	A	A1S	Potri.001G442600	Potri.001G442600(AS)	POPTR_0001s43320	NA	NA	AT2G36840.1	| Symbols: | ACT-like superfamily protein | chr2:15451834-15453550 REVERSE LENGTH=410	LOC_Os09g39740.1	protein|ACT domain containing protein, expressed	NA	NA	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0008152|metabolic process GO:0009644|response to high light intensity GO:0042542|response to hydrogen peroxide	GO:0016597|amino acid binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04461	B	B1S	Potri.001G442700	Potri.001G442700(BS)	POPTR_0001s43330	sp|O04893|AGLU_SPIOL	Alpha-glucosidase OS=Spinacia oleracea PE=1 SV=1	AT5G11720.1	| Symbols: | Glycosyl hydrolases family 31 protein | chr5:3776840-3780025 FORWARD LENGTH=902	LOC_Os06g46340.1	protein|glycosyl hydrolase, family 31, putative, expressed	IMGA|Medtr5g057990.1	Alpha-D-xylosidase chr5 23263285-23269210 F EGN_Mt100125 20111014	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0005975|carbohydrate metabolic process GO:0009086|methionine biosynthetic process	GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0005576|extracellular region GO:0005773|vacuole GO:0009505|plant-type cell wall GO:0048046|apoplast
pt2_04462	A	A1S	Potri.001G442800	Potri.001G442800(AS)	POPTR_0001s43340	sp|O04893|AGLU_SPIOL	Alpha-glucosidase OS=Spinacia oleracea PE=1 SV=1	AT5G11720.1	| Symbols: | Glycosyl hydrolases family 31 protein | chr5:3776840-3780025 FORWARD LENGTH=902	LOC_Os06g46284.2	protein|glycosyl hydrolase, family 31, putative, expressed	IMGA|contig_50618_1.1	Alpha-glucosidase contig_50618 411-4099 E PREDN 20111014	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0005975|carbohydrate metabolic process GO:0009086|methionine biosynthetic process	GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0005576|extracellular region GO:0005773|vacuole GO:0009505|plant-type cell wall GO:0048046|apoplast
pt2_04463	A	A1S	Potri.001G442900	Potri.001G442900(AS)	POPTR_0001s43350	sp|Q9P1Q0|VPS54_HUMAN	Vacuolar protein sorting-associated protein 54 OS=Homo sapiens GN=VPS54 PE=1 SV=2	AT4G19490.2	| Symbols: ATVPS54, VPS54 | VPS54 | chr4:10616017-10622934 FORWARD LENGTH=1034	LOC_Os04g13470.1	protein|expressed protein	NA	NA	GO:0042147|retrograde transport, endosome to Golgi	NA	GO:0005794|Golgi apparatus GO:0009507|chloroplast
pt2_04464	G	G1	NA	NA	POPTR_0001s43360	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04465	C	C1S	Potri.001G443000	Potri.001G443000(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04466	A	A1S	Potri.001G443200	Potri.001G443200(AS)	POPTR_0001s43380	sp|Q94FN2|MOR1_ARATH	Protein MOR1 OS=Arabidopsis thaliana GN=MOR1 PE=1 SV=1	AT2G35630.1	| Symbols: MOR1, GEM1 | ARM repeat superfamily protein | chr2:14966828-14980361 FORWARD LENGTH=1978	LOC_Os01g60050.1	protein|HEAT, putative, expressed	NA	NA	GO:0000226|microtubule cytoskeleton organization GO:0006342|chromatin silencing GO:0007067|mitosis GO:0007129|synapsis GO:0007131|reciprocal meiotic recombination GO:0009630|gravitropism GO:0009920|cell plate formation involved in plant-type cell wall biogenesis GO:0010564|regulation of cell cycle process GO:0016572|histone phosphorylation GO:0051567|histone H3-K9 methylation	GO:0008017|microtubule binding	GO:0005634|nucleus GO:0005819|spindle GO:0005874|microtubule GO:0009506|plasmodesma GO:0009524|phragmoplast GO:0009574|preprophase band GO:0030981|cortical microtubule cytoskeleton
pt2_04467	A	A1S	Potri.001G443300	Potri.001G443300(AS)	POPTR_0001s43390	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04468	G	G1	NA	NA	POPTR_0001s43400	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04469	A	A1S	Potri.001G443400	Potri.001G443400(AS)	POPTR_0001s43410	sp|O81825|DRL28_ARATH	Probable disease resistance protein At4g27220 OS=Arabidopsis thaliana GN=At4g27220 PE=2 SV=1	AT4G27220.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr4:13633953-13636712 REVERSE LENGTH=919	LOC_Os01g72680.1	protein|disease resistance protein RPS2, putative, expressed	IMGA|Medtr1g041550.1	Cc-nbs resistance protein chr1 11650158-11644067 E EGN_Mt100125 20111014	GO:0006952|defense response	GO:0000166|nucleotide binding GO:0017111|nucleoside-triphosphatase activity GO:0043531|ADP binding	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_04470	C	C1S	Potri.001G443500	Potri.001G443500(CS)	NA	NA	NA	NA	NA	NA	IMGA|Medtr5g092190.1	Cc-nbs-lrr resistance protein chr5 39226547-39217532 E EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0002831|regulation of response to biotic stimulus GO:0006612|protein targeting to membrane GO:0006952|defense response GO:0009595|detection of biotic stimulus GO:0009617|response to bacterium GO:0009626|plant-type hypersensitive response GO:0009697|salicylic acid biosynthetic process GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0016045|detection of bacterium GO:0031347|regulation of defense response GO:0031348|negative regulation of defense response GO:0042742|defense response to bacterium GO:0043069|negative regulation of programmed cell death GO:0043900|regulation of multi-organism process GO:0045087|innate immune response GO:0050776|regulation of immune response GO:0050832|defense response to fungus GO:0051707|response to other organism	GO:0000166|nucleotide binding GO:0005515|protein binding GO:0017111|nucleoside-triphosphatase activity GO:0043531|ADP binding	GO:0005886|plasma membrane
pt2_04471	A	A3S	Potri.001G443600	Potri.001G443600(AS) Potri.001G444300(BS) Potri.T087800(BS)	POPTR_0001s43430	NA	NA	AT1G34050.1	| Symbols: | Ankyrin repeat family protein | chr1:12393495-12396006 FORWARD LENGTH=573	NA	NA	NA	NA	GO:0008150|biological_process	NA	GO:0005575|cellular_component
pt2_04472	A	A2S	Potri.001G445700	Potri.001G445700(AS) Potri.001G445100(BS)	POPTR_0001s43440	sp|Q9T048|DRL27_ARATH	Disease resistance protein At4g27190 OS=Arabidopsis thaliana GN=At4g27190 PE=2 SV=1	AT4G27190.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr4:13620977-13623934 REVERSE LENGTH=985	LOC_Os01g72680.1	protein|disease resistance protein RPS2, putative, expressed	IMGA|Medtr1g041550.1	Cc-nbs resistance protein chr1 11650158-11644067 E EGN_Mt100125 20111014	GO:0006952|defense response	GO:0000166|nucleotide binding GO:0017111|nucleoside-triphosphatase activity GO:0043531|ADP binding	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_04473	A	A2S	Potri.T087700	Potri.T087700(AS) Potri.001G433500(DS)	POPTR_0001s43450	sp|Q9T048|DRL27_ARATH	Disease resistance protein At4g27190 OS=Arabidopsis thaliana GN=At4g27190 PE=2 SV=1	AT4G27190.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr4:13620977-13623934 REVERSE LENGTH=985	LOC_Os01g72680.1	protein|disease resistance protein RPS2, putative, expressed	IMGA|Medtr1g041550.1	Cc-nbs resistance protein chr1 11650158-11644067 E EGN_Mt100125 20111014	GO:0006952|defense response	GO:0000166|nucleotide binding GO:0017111|nucleoside-triphosphatase activity GO:0043531|ADP binding	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_04474	A	A4S	Potri.T087700	Potri.T087700(AS) Potri.T162100(DS) Potri.001G446700(DS) Potri.001G444000(DS)	POPTR_0001s43460	sp|Q9T048|DRL27_ARATH	Disease resistance protein At4g27190 OS=Arabidopsis thaliana GN=At4g27190 PE=2 SV=1	AT4G27190.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr4:13620977-13623934 REVERSE LENGTH=985	LOC_Os01g72680.1	protein|disease resistance protein RPS2, putative, expressed	IMGA|Medtr1g041550.1	Cc-nbs resistance protein chr1 11650158-11644067 E EGN_Mt100125 20111014	GO:0006952|defense response	GO:0000166|nucleotide binding GO:0017111|nucleoside-triphosphatase activity GO:0043531|ADP binding	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_04475	A	A5S	Potri.T162100	Potri.T162100(AS) Potri.001G446600(BS) Potri.001G445200(BS) Potri.T087900(DS) Potri.001G444100(DS)	POPTR_0001s43470	sp|Q9T048|DRL27_ARATH	Disease resistance protein At4g27190 OS=Arabidopsis thaliana GN=At4g27190 PE=2 SV=1	AT4G27190.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr4:13620977-13623934 REVERSE LENGTH=985	LOC_Os01g72680.1	protein|disease resistance protein RPS2, putative, expressed	IMGA|Medtr5g085400.1	Cc-nbs-lrr resistance protein chr5 35906400-35914135 H EGN_Mt100125 20111014	GO:0006952|defense response	GO:0000166|nucleotide binding GO:0017111|nucleoside-triphosphatase activity GO:0043531|ADP binding	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_04476	C	C1S	Potri.001G445800	Potri.001G445800(CS)	NA	NA	NA	NA	NA	NA	IMGA|Medtr5g092190.1	Cc-nbs-lrr resistance protein chr5 39226547-39217532 E EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0006952|defense response	GO:0043531|ADP binding	GO:0005634|nucleus
pt2_04477	A	A2S	Potri.001G444200	Potri.001G444200(AS) Potri.T087700(BS)	POPTR_0001s43476	NA	NA	NA	NA	LOC_Os11g35630.1	protein|retrotransposon protein, putative, unclassified, expressed	IMGA|Medtr5g005300.1	"Mitochondrial protein, putative" chr5 127659-127329 H EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0006952|defense response	GO:0043531|ADP binding	GO:0005886|plasma membrane
pt2_04478	A	A3S	Potri.T087800	Potri.T087800(AS) Potri.001G444300(BS) Potri.001G443600(BS)	POPTR_0001s43480	NA	NA	AT1G34050.1	| Symbols: | Ankyrin repeat family protein | chr1:12393495-12396006 FORWARD LENGTH=573	NA	NA	NA	NA	GO:0008150|biological_process	NA	GO:0005575|cellular_component
pt2_04479	A	A3S	Potri.001G444500	Potri.001G444500(AS) Potri.T087700(BS) Potri.T162100(DS)	POPTR_0001s43490	sp|Q9T048|DRL27_ARATH	Disease resistance protein At4g27190 OS=Arabidopsis thaliana GN=At4g27190 PE=2 SV=1	AT4G27190.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr4:13620977-13623934 REVERSE LENGTH=985	LOC_Os01g72680.1	protein|disease resistance protein RPS2, putative, expressed	IMGA|Medtr1g041550.1	Cc-nbs resistance protein chr1 11650158-11644067 E EGN_Mt100125 20111014	GO:0006952|defense response	GO:0000166|nucleotide binding GO:0017111|nucleoside-triphosphatase activity GO:0043531|ADP binding	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_04480	A	A4S	Potri.001G444600	Potri.001G444600(AS) Potri.T162100(BS) Potri.001G445900(BS) Potri.001G444100(BS)	POPTR_0001s43500	sp|O64789|DRL18_ARATH	Probable disease resistance protein At1g61310 OS=Arabidopsis thaliana GN=At1g61310 PE=2 SV=1	AT1G61310.1	| Symbols: | LRR and NB-ARC domains-containing disease resistance protein | chr1:22613166-22615943 REVERSE LENGTH=925	LOC_Os01g72680.1	protein|disease resistance protein RPS2, putative, expressed	IMGA|Medtr5g092190.1	Cc-nbs-lrr resistance protein chr5 39226547-39217532 E EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0006952|defense response	GO:0043531|ADP binding	GO:0005886|plasma membrane
pt2_04481	C	C1S	Potri.001G444700	Potri.001G444700(CS)	sp|O81825|DRL28_ARATH	Probable disease resistance protein At4g27220 OS=Arabidopsis thaliana GN=At4g27220 PE=2 SV=1	AT4G27220.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr4:13633953-13636712 REVERSE LENGTH=919	LOC_Os01g72680.1	protein|disease resistance protein RPS2, putative, expressed	IMGA|Medtr1g041550.1	Cc-nbs resistance protein chr1 11650158-11644067 E EGN_Mt100125 20111014	GO:0006952|defense response	GO:0000166|nucleotide binding GO:0017111|nucleoside-triphosphatase activity GO:0043531|ADP binding	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_04482	A	A3S	Potri.001G444800	Potri.001G444800(AS) Potri.001G446800(BS) Potri.001G445500(BS)	POPTR_0001s43520	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04483	A	A4S	Potri.001G444900	Potri.001G444900(AS) Potri.001G446800(BS) Potri.001G444800(BS) Potri.001G445500(DS)	POPTR_0001s43530	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04484	A	A1S	Potri.001G446000	Potri.001G446000(AS)	POPTR_0001s43540	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04485	C	C1S	Potri.001G446300	Potri.001G446300(CS)	sp|O81825|DRL28_ARATH	Probable disease resistance protein At4g27220 OS=Arabidopsis thaliana GN=At4g27220 PE=2 SV=1	AT4G27220.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr4:13633953-13636712 REVERSE LENGTH=919	LOC_Os01g72680.1	protein|disease resistance protein RPS2, putative, expressed	IMGA|Medtr5g036460.1	Disease resistance protein chr5 15473284-15460284 H EGN_Mt100125 20111014	GO:0006952|defense response	GO:0000166|nucleotide binding GO:0017111|nucleoside-triphosphatase activity GO:0043531|ADP binding	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_04486	A	A7S	Potri.001G446400	Potri.001G446400(AS) Potri.T162100(DS) Potri.001G445200(DS) Potri.001G444100(DS) Potri.001G426900(DS) Potri.001G444000(DS) Potri.001G447200(DS)	POPTR_0001s43550	NA	NA	NA	NA	NA	NA	IMGA|Medtr5g092190.1	Cc-nbs-lrr resistance protein chr5 39226547-39217532 E EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0002831|regulation of response to biotic stimulus GO:0006612|protein targeting to membrane GO:0006952|defense response GO:0009595|detection of biotic stimulus GO:0009617|response to bacterium GO:0009626|plant-type hypersensitive response GO:0009697|salicylic acid biosynthetic process GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0016045|detection of bacterium GO:0031347|regulation of defense response GO:0031348|negative regulation of defense response GO:0042742|defense response to bacterium GO:0043069|negative regulation of programmed cell death GO:0043900|regulation of multi-organism process GO:0045087|innate immune response GO:0050776|regulation of immune response GO:0050832|defense response to fungus GO:0051707|response to other organism	GO:0000166|nucleotide binding GO:0005515|protein binding GO:0017111|nucleoside-triphosphatase activity GO:0043531|ADP binding	GO:0005886|plasma membrane
pt2_04487	A	A5S	Potri.001G446500	Potri.001G446500(AS) Potri.001G446800(BS) Potri.001G445500(BS) Potri.001G444900(BS) Potri.001G444800(BS)	POPTR_0001s43560	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_04488	B	B1S	Potri.001G446800	Potri.001G446800(BS)	POPTR_0001s43570	NA	NA	AT1G79160.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16500.1); Has 104 Blast hits to 102 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 104; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:29779862-29780668 REVERSE LENGTH=239	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_04489	C	C7S	Potri.001G444500	Potri.001G444500(CS) Potri.001G445000(CS) Potri.001G444600(CS) Potri.001G445600(CS) Potri.001G444700(CA) Potri.001G444800(CA) Potri.001G444900(CA)	sp|Q9T048|DRL27_ARATH	Disease resistance protein At4g27190 OS=Arabidopsis thaliana GN=At4g27190 PE=2 SV=1	AT4G27190.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr4:13620977-13623934 REVERSE LENGTH=985	LOC_Os01g72680.1	protein|disease resistance protein RPS2, putative, expressed	IMGA|Medtr1g041550.1	Cc-nbs resistance protein chr1 11650158-11644067 E EGN_Mt100125 20111014	GO:0006952|defense response	GO:0000166|nucleotide binding GO:0017111|nucleoside-triphosphatase activity GO:0043531|ADP binding	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_04490	A	A4S	Potri.001G445500	Potri.001G445500(AS) Potri.001G444900(BS) Potri.001G444800(BS) Potri.001G446800(DS)	POPTR_0001s43590	NA	NA	AT1G79160.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16500.1); Has 104 Blast hits to 102 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 104; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:29779862-29780668 REVERSE LENGTH=239	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_04491	A	A2S	Potri.T087900	Potri.T087900(AS) Potri.001G446700(DS)	POPTR_0001s43600	sp|Q9T048|DRL27_ARATH	Disease resistance protein At4g27190 OS=Arabidopsis thaliana GN=At4g27190 PE=2 SV=1	AT4G27190.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr4:13620977-13623934 REVERSE LENGTH=985	LOC_Os11g29090.1	protein|NB-ARC/LRR disease resistance protein, putative, expressed	IMGA|Medtr5g036460.1	Disease resistance protein chr5 15473284-15460284 H EGN_Mt100125 20111014	GO:0006952|defense response	GO:0000166|nucleotide binding GO:0017111|nucleoside-triphosphatase activity GO:0043531|ADP binding	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_04492	D	D2S	Potri.001G423400	Potri.001G423400(DS) Potri.T066800(DS)	POPTR_0001s43610	sp|Q93W34|RP45C_ARATH	Polyadenylate-binding protein RBP45C OS=Arabidopsis thaliana GN=RBP45C PE=2 SV=1	AT4G27000.1	| Symbols: ATRBP45C | RNA-binding (RRM/RBD/RNP motifs) family protein | chr4:13554983-13557763 REVERSE LENGTH=415	LOC_Os03g37270.1	protein|RNA recognition motif containing protein, putative, expressed	IMGA|Medtr1g019150.1	Polyadenylate-binding protein chr1 5864665-5869890 F EGN_Mt100125 20111014	GO:0000398|mRNA splicing, via spliceosome	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005829|cytosol
pt2_04493	D	D2S	Potri.T066700	Potri.T066700(DS) Potri.001G423300(DS)	POPTR_0001s43620	sp|Q9FFT9|RH32_ARATH	DEAD-box ATP-dependent RNA helicase 32 OS=Arabidopsis thaliana GN=RH32 PE=2 SV=1	AT5G54910.1	| Symbols: | DEA(D/H)-box RNA helicase family protein | chr5:22298668-22301719 REVERSE LENGTH=739	LOC_Os07g33340.1	protein|DEAD-box ATP-dependent RNA helicase, putative, expressed	IMGA|Medtr5g092560.1	ATP-dependent RNA helicase DBP4 chr5 39389139-39383328 E EGN_Mt100125 20111014	GO:0006606|protein import into nucleus	GO:0003676|nucleic acid binding GO:0004386|helicase activity GO:0005524|ATP binding GO:0008026|ATP-dependent helicase activity	GO:0005634|nucleus GO:0005730|nucleolus
pt2_04494	R	R	NA	NA	POPTR_0001s43630	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04495	A	A1S	Potri.001G431900	Potri.001G431900(AS)	POPTR_0001s43640	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04496	A	A1S	Potri.T066100	Potri.T066100(AS)	POPTR_0001s43650	NA	NA	NA	NA	NA	NA	IMGA|Medtr5g092190.1	Cc-nbs-lrr resistance protein chr5 39226547-39217532 E EGN_Mt100125 20111014	NA	NA	NA
pt2_04497	A	A3S	Potri.001G429800	Potri.001G429800(AS) Potri.001G427500(DS) Potri.001G432700(DS)	POPTR_0001s43660	sp|Q9T048|DRL27_ARATH	Disease resistance protein At4g27190 OS=Arabidopsis thaliana GN=At4g27190 PE=2 SV=1	AT4G27190.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr4:13620977-13623934 REVERSE LENGTH=985	LOC_Os01g72680.1	protein|disease resistance protein RPS2, putative, expressed	IMGA|Medtr1g041550.1	Cc-nbs resistance protein chr1 11650158-11644067 E EGN_Mt100125 20111014	GO:0006952|defense response	GO:0000166|nucleotide binding GO:0017111|nucleoside-triphosphatase activity GO:0043531|ADP binding	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_04498	A	A4S	Potri.T066000	Potri.T066000(AS) Potri.001G429200(AS) Potri.001G435300(AS) Potri.001G430000(BS)	POPTR_0001s43670	sp|Q0IHH1|NAA30_XENLA	N-alpha-acetyltransferase 30 OS=Xenopus laevis GN=naa30 PE=2 SV=1	AT2G38130.2	| Symbols: ATMAK3 | Acyl-CoA N-acyltransferases (NAT) superfamily protein | chr2:15978639-15980145 REVERSE LENGTH=190	LOC_Os11g32280.1	protein|acetyltransferase, GNAT family, putative, expressed	IMGA|Medtr5g098790.1	N-acetyltransferase NAT13 chr5 42227632-42224778 F EGN_Mt100125 20111014	GO:0001676|long-chain fatty acid metabolic process GO:0002213|defense response to insect GO:0006301|postreplication repair GO:0006633|fatty acid biosynthetic process GO:0008152|metabolic process	GO:0008080|N-acetyltransferase activity	GO:0005737|cytoplasm
pt2_04499	A	A2S	Potri.001G429300	Potri.001G429300(AS) Potri.004G063700(BS)	POPTR_0001s43680	NA	NA	NA	NA	LOC_Os01g15720.1	protein|tobamovirus movement protein containing protein, expressed	NA	NA	NA	NA	NA
pt2_04500	A	A8S	Potri.001G433500	Potri.001G433500(AS) Potri.001G427300(BS) Potri.001G429800(BS) Potri.001G422800(BS) Potri.T065800(DS) Potri.001G419800(DS) Potri.001G429600(DS) Potri.001G426900(DS)	POPTR_0001s43690	sp|Q9T048|DRL27_ARATH	Disease resistance protein At4g27190 OS=Arabidopsis thaliana GN=At4g27190 PE=2 SV=1	AT4G27190.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr4:13620977-13623934 REVERSE LENGTH=985	LOC_Os09g14060.1	protein|disease resistance protein RPS2, putative, expressed	IMGA|Medtr5g085400.1	Cc-nbs-lrr resistance protein chr5 35906400-35914135 H EGN_Mt100125 20111014	GO:0006952|defense response	GO:0000166|nucleotide binding GO:0017111|nucleoside-triphosphatase activity GO:0043531|ADP binding	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_04501	A	A1S	Potri.001G432300	Potri.001G432300(AS)	POPTR_0001s43700	sp|Q9T048|DRL27_ARATH	Disease resistance protein At4g27190 OS=Arabidopsis thaliana GN=At4g27190 PE=2 SV=1	AT4G27190.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr4:13620977-13623934 REVERSE LENGTH=985	LOC_Os01g72680.1	protein|disease resistance protein RPS2, putative, expressed	IMGA|Medtr5g085400.1	Cc-nbs-lrr resistance protein chr5 35906400-35914135 H EGN_Mt100125 20111014	GO:0006952|defense response	GO:0000166|nucleotide binding GO:0017111|nucleoside-triphosphatase activity GO:0043531|ADP binding	GO:0005575|cellular_component GO:0005634|nucleus GO:0005739|mitochondrion
pt2_04502	G	G1	NA	NA	POPTR_0001s43710	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04503	A	A6S	Potri.001G432400	Potri.001G432400(AS) Potri.001G435300(AS) Potri.T066000(BS) Potri.001G430000(BS) Potri.001G429200(BS) Potri.011G139300(DS)	POPTR_0001s43720	sp|O74311|NAA30_SCHPO	N-alpha-acetyltransferase 30 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=MAK3 PE=2 SV=1	AT2G38130.2	| Symbols: ATMAK3 | Acyl-CoA N-acyltransferases (NAT) superfamily protein | chr2:15978639-15980145 REVERSE LENGTH=190	LOC_Os11g32280.1	protein|acetyltransferase, GNAT family, putative, expressed	IMGA|Medtr5g098790.1	N-acetyltransferase NAT13 chr5 42227632-42224778 F EGN_Mt100125 20111014	GO:0001676|long-chain fatty acid metabolic process GO:0002213|defense response to insect GO:0006301|postreplication repair GO:0006633|fatty acid biosynthetic process GO:0008152|metabolic process	GO:0008080|N-acetyltransferase activity	GO:0005737|cytoplasm
pt2_04504	B	B2S	Potri.001G435000	Potri.001G435000(BS) Potri.001G422900(BS)	POPTR_0001s43730	NA	NA	AT4G26090.1	| Symbols: RPS2 | NB-ARC domain-containing disease resistance protein | chr4:13224596-13227325 FORWARD LENGTH=909	NA	NA	IMGA|Medtr1g041550.1	Cc-nbs resistance protein chr1 11650158-11644067 E EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0002831|regulation of response to biotic stimulus GO:0006612|protein targeting to membrane GO:0006952|defense response GO:0009595|detection of biotic stimulus GO:0009617|response to bacterium GO:0009626|plant-type hypersensitive response GO:0009697|salicylic acid biosynthetic process GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0016045|detection of bacterium GO:0031347|regulation of defense response GO:0031348|negative regulation of defense response GO:0042742|defense response to bacterium GO:0043069|negative regulation of programmed cell death GO:0043900|regulation of multi-organism process GO:0045087|innate immune response GO:0050776|regulation of immune response GO:0050832|defense response to fungus GO:0051707|response to other organism	GO:0000166|nucleotide binding GO:0005515|protein binding GO:0017111|nucleoside-triphosphatase activity GO:0043531|ADP binding	GO:0005886|plasma membrane
pt2_04505	A	A1S	Potri.T176100	Potri.T176100(AS)	POPTR_0001s43735	sp|Q42484|RPS2_ARATH	Disease resistance protein RPS2 OS=Arabidopsis thaliana GN=RPS2 PE=1 SV=1	AT4G26090.1	| Symbols: RPS2 | NB-ARC domain-containing disease resistance protein | chr4:13224596-13227325 FORWARD LENGTH=909	LOC_Os01g57870.1	protein|disease resistance protein RPS2, putative, expressed	IMGA|Medtr1g041550.1	Cc-nbs resistance protein chr1 11650158-11644067 E EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0002831|regulation of response to biotic stimulus GO:0006612|protein targeting to membrane GO:0006952|defense response GO:0009595|detection of biotic stimulus GO:0009617|response to bacterium GO:0009626|plant-type hypersensitive response GO:0009697|salicylic acid biosynthetic process GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0016045|detection of bacterium GO:0031347|regulation of defense response GO:0031348|negative regulation of defense response GO:0042742|defense response to bacterium GO:0043069|negative regulation of programmed cell death GO:0043900|regulation of multi-organism process GO:0045087|innate immune response GO:0050776|regulation of immune response GO:0050832|defense response to fungus GO:0051707|response to other organism	GO:0000166|nucleotide binding GO:0005515|protein binding GO:0017111|nucleoside-triphosphatase activity GO:0043531|ADP binding	GO:0005886|plasma membrane
pt2_04506	A	A12S	Potri.001G432800	Potri.001G432800(AS) Potri.T176100(AS) Potri.001G427500(DS) Potri.001G433700(DS) Potri.001G427700(DS) Potri.001G444500(DS) Potri.001G433900(DS) Potri.T100800(DS) Potri.001G434700(DS) Potri.001G429600(DS) Potri.001G426500(DS) Potri.001G428100(DS)	POPTR_0001s43740	sp|Q8L3R3|RFL1_ARATH	Disease resistance protein RFL1 OS=Arabidopsis thaliana GN=RFL1 PE=2 SV=2	AT1G12210.1	| Symbols: RFL1 | RPS5-like 1 | chr1:4140948-4143605 FORWARD LENGTH=885	LOC_Os09g14060.1	protein|disease resistance protein RPS2, putative, expressed	IMGA|Medtr1g041550.1	Cc-nbs resistance protein chr1 11650158-11644067 E EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0002831|regulation of response to biotic stimulus GO:0006612|protein targeting to membrane GO:0006952|defense response GO:0009595|detection of biotic stimulus GO:0009617|response to bacterium GO:0009626|plant-type hypersensitive response GO:0009697|salicylic acid biosynthetic process GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0016045|detection of bacterium GO:0031347|regulation of defense response GO:0031348|negative regulation of defense response GO:0042742|defense response to bacterium GO:0043069|negative regulation of programmed cell death GO:0043900|regulation of multi-organism process GO:0045087|innate immune response GO:0050776|regulation of immune response GO:0050832|defense response to fungus GO:0051707|response to other organism	GO:0000166|nucleotide binding GO:0005515|protein binding GO:0017111|nucleoside-triphosphatase activity GO:0043531|ADP binding	GO:0005886|plasma membrane
pt2_04507	C	C2S	Potri.001G426000	Potri.001G426000(CS) Potri.001G422700(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04508	A	A2S	Potri.001G433000	Potri.001G433000(AS) Potri.001G434500(BS)	POPTR_0001s43760	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04509	A	A1S	Potri.001G433100	Potri.001G433100(AS)	POPTR_0001s43770	NA	NA	NA	NA	LOC_Os06g25550.1	protein|retrotransposon protein, putative, unclassified, expressed	IMGA|Medtr5g057040.1	F-box/kelch-repeat protein chr5 22919595-22925875 E EGN_Mt100125 20111014	NA	NA	NA
pt2_04510	D	D4S	Potri.001G447000	Potri.001G447000(DS) Potri.001G444700(DS) Potri.001G420000(DS) Potri.001G433500(DS)	POPTR_0001s43790	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04511	A	A3S	Potri.001G433600	Potri.001G433600(AS) Potri.001G446700(DS) Potri.T087700(DS)	POPTR_0001s43800	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04512	A	A7S	Potri.001G433800	Potri.001G433800(AS) Potri.001G425800(AS) Potri.001G432400(AS) Potri.001G435300(AS) Potri.T066000(BS) Potri.001G430000(BS) Potri.001G429200(BS)	POPTR_0001s43810	sp|Q8CES0|NAA30_MOUSE	N-alpha-acetyltransferase 30 OS=Mus musculus GN=Naa30 PE=2 SV=2	AT2G38130.2	| Symbols: ATMAK3 | Acyl-CoA N-acyltransferases (NAT) superfamily protein | chr2:15978639-15980145 REVERSE LENGTH=190	LOC_Os11g32280.1	protein|acetyltransferase, GNAT family, putative, expressed	NA	NA	GO:0001676|long-chain fatty acid metabolic process GO:0002213|defense response to insect GO:0006301|postreplication repair GO:0006633|fatty acid biosynthetic process GO:0008152|metabolic process	GO:0008080|N-acetyltransferase activity	GO:0005737|cytoplasm
pt2_04513	A	A22S	Potri.001G433900	Potri.001G433900(AS) Potri.001G435000(BS) Potri.001G432800(BS) Potri.T176100(BS) Potri.001G428100(BS) Potri.001G427300(DS) Potri.001G433700(DS) Potri.001G445700(DS) Potri.001G445900(DS) Potri.001G427000(DS) Potri.001G444500(DS) Potri.001G446900(DS) Potri.001G445200(DS) Potri.001G419800(DS) Potri.T100800(DS) Potri.001G429600(DS) Potri.001G443700(DS) Potri.001G427100(DS) Potri.001G445000(DS) Potri.001G425300(DS) Potri.001G444000(DS) Potri.001G443400(DS)	POPTR_0001s43820	sp|O81825|DRL28_ARATH	Probable disease resistance protein At4g27220 OS=Arabidopsis thaliana GN=At4g27220 PE=2 SV=1	AT4G27220.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr4:13633953-13636712 REVERSE LENGTH=919	LOC_Os01g72680.1	protein|disease resistance protein RPS2, putative, expressed	IMGA|Medtr1g006980.1	Nascent polypeptide-associated complex alpha subunit-like protein chr1 699419-707233 H EGN_Mt100125 20111014	GO:0006952|defense response	GO:0043531|ADP binding	GO:0005634|nucleus
pt2_04514	A	A1S	Potri.001G434000	Potri.001G434000(AS)	POPTR_0001s43825	sp|Q9T048|DRL27_ARATH	Disease resistance protein At4g27190 OS=Arabidopsis thaliana GN=At4g27190 PE=2 SV=1	AT4G27190.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr4:13620977-13623934 REVERSE LENGTH=985	LOC_Os01g72680.1	protein|disease resistance protein RPS2, putative, expressed	IMGA|Medtr1g041550.1	Cc-nbs resistance protein chr1 11650158-11644067 E EGN_Mt100125 20111014	GO:0006952|defense response	GO:0000166|nucleotide binding GO:0017111|nucleoside-triphosphatase activity GO:0043531|ADP binding	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_04515	A	A1S	Potri.001G411600	Potri.001G411600(AS)	POPTR_0001s43830	sp|O81833|SD11_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1 OS=Arabidopsis thaliana GN=SD11 PE=1 SV=1	AT4G27300.1	| Symbols: | S-locus lectin protein kinase family protein | chr4:13669308-13672348 REVERSE LENGTH=815	LOC_Os07g36570.1	protein|KI domain interacting kinase 1, putative, expressed	IMGA|Medtr5g067310.1	Serine/threonine protein kinase chr5 27450376-27453491 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0046777|protein autophosphorylation GO:0048544|recognition of pollen	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding GO:0031625|ubiquitin protein ligase binding	GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_04516	G	G2	NA	NA	POPTR_0001s43840	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04517	A	A4S	Potri.001G411400	Potri.001G411400(AS) Potri.001G411300(BS) Potri.001G418100(BS) Potri.001G410800(BS)	POPTR_0001s43850	sp|O81832|Y4729_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana GN=At4g27290 PE=2 SV=4	AT4G27290.1	| Symbols: | S-locus lectin protein kinase family protein | chr4:13666281-13669202 FORWARD LENGTH=783	LOC_Os03g35600.1	protein|serine/threonine-protein kinase receptor precursor, putative, expressed	IMGA|Medtr5g055070.1	Cysteine-rich receptor-like protein kinase chr5 22150681-22146797 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0048544|recognition of pollen GO:0048765|root hair cell differentiation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_04518	A	A4S	Potri.001G411300	Potri.001G411300(AS) Potri.001G418100(AS) Potri.001G411400(AS) Potri.001G410800(BS)	POPTR_0001s43860	sp|O81832|Y4729_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana GN=At4g27290 PE=2 SV=4	AT4G27290.1	| Symbols: | S-locus lectin protein kinase family protein | chr4:13666281-13669202 FORWARD LENGTH=783	LOC_Os01g57560.1	protein|serine/threonine-protein kinase receptor precursor, putative, expressed	IMGA|Medtr5g055070.1	Cysteine-rich receptor-like protein kinase chr5 22150681-22146797 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0048544|recognition of pollen GO:0048765|root hair cell differentiation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_04519	B	B2S	Potri.001G411200	Potri.001G411200(BS) Potri.011G020000(DS)	POPTR_0001s43870	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04520	G	G1	NA	NA	POPTR_0001s43880	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04521	A	A2S	Potri.001G411000	Potri.001G411000(AS) Potri.001G411100(AS)	POPTR_0001s43890	sp|O81832|Y4729_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana GN=At4g27290 PE=2 SV=4	AT4G27290.1	| Symbols: | S-locus lectin protein kinase family protein | chr4:13666281-13669202 FORWARD LENGTH=783	LOC_Os07g36544.2	protein|serine/threonine-protein kinase receptor precursor, putative, expressed	IMGA|Medtr5g055070.1	Cysteine-rich receptor-like protein kinase chr5 22150681-22146797 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0048544|recognition of pollen GO:0048765|root hair cell differentiation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_04522	B	B2S	Potri.001G411000	Potri.001G411000(BS) Potri.001G411100(BS)	POPTR_0001s43900	sp|O81832|Y4729_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana GN=At4g27290 PE=2 SV=4	AT4G27290.1	| Symbols: | S-locus lectin protein kinase family protein | chr4:13666281-13669202 FORWARD LENGTH=783	LOC_Os07g36544.2	protein|serine/threonine-protein kinase receptor precursor, putative, expressed	IMGA|Medtr5g055070.1	Cysteine-rich receptor-like protein kinase chr5 22150681-22146797 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0048544|recognition of pollen GO:0048765|root hair cell differentiation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_04523	A	A6S	Potri.001G410900	Potri.001G410900(AS) Potri.007G063400(BS) Potri.007G063500(BS) Potri.016G095600(BS) Potri.004G232100(BS) Potri.004G232000(DS)	POPTR_0001s43910	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04524	R	R	NA	NA	POPTR_0001s43920	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04525	C	C1S	Potri.001G410800	Potri.001G410800(CS)	sp|O81905|SD18_ARATH	Receptor-like serine/threonine-protein kinase SD1-8 OS=Arabidopsis thaliana GN=SD18 PE=1 SV=1	AT4G21380.1	| Symbols: ARK3, RK3 | receptor kinase 3 | chr4:11389219-11393090 REVERSE LENGTH=850	LOC_Os03g35600.1	protein|serine/threonine-protein kinase receptor precursor, putative, expressed	IMGA|Medtr5g055070.1	Cysteine-rich receptor-like protein kinase chr5 22150681-22146797 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0048544|recognition of pollen GO:0048765|root hair cell differentiation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_04526	A	A2S	Potri.001G410700	Potri.001G410700(AS) Potri.011G129400(DS)	POPTR_0001s43940	sp|C4XGC2|WRBA_DESMR	Flavoprotein WrbA OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=wrbA PE=3 SV=1	AT4G27270.1	| Symbols: | Quinone reductase family protein | chr4:13661458-13663243 REVERSE LENGTH=205	LOC_Os08g04460.1	protein|NADPH-dependent FMN reductase domain containing protein, expressed	IMGA|Medtr5g070030.1	Flavoprotein wrbA chr5 28687532-28689393 F EGN_Mt100125 20111014	GO:0045892|negative regulation of transcription, DNA-dependent	GO:0010181|FMN binding GO:0016491|oxidoreductase activity	GO:0005737|cytoplasm GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_04527	A	A1S	Potri.001G410600	Potri.001G410600(AS)	POPTR_0001s43950	sp|Q8GXT3|BH123_ARATH	Transcription factor bHLH123 OS=Arabidopsis thaliana GN=BHLH123 PE=2 SV=1	AT3G20640.1	| Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr3:7210654-7213199 REVERSE LENGTH=454	LOC_Os05g42180.1	protein|ethylene-responsive protein related, putative, expressed	NA	NA	NA	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_04528	A	A1S	Potri.001G410500	Potri.001G410500(AS)	POPTR_0001s43980	sp|E9Q349|WDR25_MOUSE	WD repeat-containing protein 25 OS=Mus musculus GN=Wdr25 PE=2 SV=1	AT5G54520.1	| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr5:22146781-22149089 REVERSE LENGTH=457	LOC_Os02g21490.1	protein|WD domain, G-beta repeat domain containing protein, expressed	NA	NA	GO:0008150|biological_process GO:0048573|photoperiodism, flowering	GO:0003674|molecular_function	GO:0005737|cytoplasm GO:0005834|heterotrimeric G-protein complex GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_04529	A	A1S	Potri.001G410400	Potri.001G410400(AS)	POPTR_0001s43990	sp|Q9LSQ4|GH36_ARATH	Indole-3-acetic acid-amido synthetase GH3.6 OS=Arabidopsis thaliana GN=GH3.6 PE=1 SV=1	AT5G54510.1	| Symbols: GH3.6, DFL1 | Auxin-responsive GH3 family protein | chr5:22131321-22133564 REVERSE LENGTH=612	LOC_Os01g57610.1	protein|OsGH3.1 - Probable indole-3-acetic acid-amido synthetase, expressed	IMGA|Medtr5g016320.1	Indole-3-acetic acid-amido synthetase GH3.3 chr5 5576809-5574506 F EGN_Mt100125 20111014	GO:0009733|response to auxin stimulus GO:0009734|auxin mediated signaling pathway GO:0009826|unidimensional cell growth GO:0010252|auxin homeostasis GO:0010583|response to cyclopentenone	GO:0010279|indole-3-acetic acid amido synthetase activity	GO:0005737|cytoplasm GO:0009507|chloroplast
pt2_04530	A	A1S	Potri.001G410300	Potri.001G410300(AS)	POPTR_0001s44000	NA	NA	AT5G54530.1	| Symbols: | Protein of unknown function, DUF538 | chr5:22152781-22154201 FORWARD LENGTH=161	LOC_Os07g36410.1	protein|expressed protein	IMGA|contig_24614_1.1	Unknown protein contig_24614 653-186 H PREDN 20111014	GO:0008150|biological_process	NA	GO:0009507|chloroplast
pt2_04531	A	A1S	Potri.001G410200	Potri.001G410200(AS)	POPTR_0001s44010	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008152|metabolic process GO:0048765|root hair cell differentiation	GO:0016787|hydrolase activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04532	A	A1S	Potri.001G410100	Potri.001G410100(AS)	POPTR_0001s44020	NA	NA	AT5G54540.1	| Symbols: | Uncharacterised conserved protein (UCP012943) | chr5:22156604-22157857 FORWARD LENGTH=297	LOC_Os08g08190.1	protein|expressed protein	IMGA|contig_58828_1.1	Unknown protein contig_58828 1990-1153 F PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_04533	C	C1S	Potri.001G410000	Potri.001G410000(CS)	sp|Q9LHQ7|MCES1_ARATH	mRNA cap guanine-N7 methyltransferase 1 OS=Arabidopsis thaliana GN=At3g20650 PE=2 SV=1	AT3G20650.1	| Symbols: | mRNA capping enzyme family protein | chr3:7221168-7223939 REVERSE LENGTH=370	LOC_Os08g08200.1	protein|mRNA cap guanine-N7 methyltransferase 1, putative, expressed	IMGA|contig_88159_1.1	mRNA cap guanine-N7 methyltransferase contig_88159 2048-154 H PREDN 20111014	GO:0006370|7-methylguanosine mRNA capping GO:0015824|proline transport	GO:0003824|catalytic activity GO:0004482|mRNA (guanine-N7-)-methyltransferase activity	GO:0005634|nucleus
pt2_04534	A	A1S	Potri.001G409900	Potri.001G409900(AS)	POPTR_0001s44040	sp|Q9FIU7|BGL41_ARATH	Putative beta-glucosidase 41 OS=Arabidopsis thaliana GN=BGLU41 PE=3 SV=2	AT5G54570.1	| Symbols: BGLU41 | beta glucosidase 41 | chr5:22167636-22170235 REVERSE LENGTH=535	LOC_Os06g46940.2	protein|Os6bglu25 - beta-glucosidase homologue, similar to Os3bglu6, expressed	IMGA|Medtr5g044000.1	Beta-glucosidase chr5 18933559-18926474 E EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0043169|cation binding	GO:0005576|extracellular region GO:0009505|plant-type cell wall
pt2_04535	A	A2S	Potri.001G409800	Potri.001G409800(AS) Potri.011G130300(DS)	POPTR_0001s44050	sp|Q43472|GRP_HORVU	Glycine-rich RNA-binding protein blt801 OS=Hordeum vulgare GN=blt801 PE=1 SV=1	AT5G54580.1	| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr5:22171332-22172656 FORWARD LENGTH=156	LOC_Os08g04440.1	protein|RNA recognition motif containing protein, putative, expressed	IMGA|Medtr1g092860.1	RNA-binding protein chr1 25969148-25965992 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005739|mitochondrion
pt2_04536	A	A2S	Potri.001G409700	Potri.001G409700(AS) Potri.013G140700(DS)	POPTR_0001s44060	sp|A4GYU6|RR8_POPTR	30S ribosomal protein S8, chloroplastic OS=Populus trichocarpa GN=rps8 PE=3 SV=1	ATCG00770.1	| Symbols: RPS8 | ribosomal protein S8 | chrC:80068-80472 REVERSE LENGTH=134	LOC_Os08g15278.1	protein|chloroplast 30S ribosomal protein S8, putative, expressed	NA	NA	GO:0006091|generation of precursor metabolites and energy GO:0006354|DNA-dependent transcription, elongation GO:0006412|translation GO:0015979|photosynthesis	GO:0003735|structural constituent of ribosome	GO:0000312|plastid small ribosomal subunit GO:0005622|intracellular GO:0005840|ribosome GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope GO:0016020|membrane
pt2_04537	A	A1S	Potri.001G409600	Potri.001G409600(AS)	POPTR_0001s44070	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_04538	A	A1S	Potri.001G415100	Potri.001G415100(AS)	POPTR_0001s44080	sp|Q6Q3H3|TPSGD_VITVI	(-)-germacrene D synthase OS=Vitis vinifera GN=VIT_19s0014g04930 PE=1 SV=1	AT5G23960.2	| Symbols: TPS21 | terpene synthase 21 | chr5:8092969-8095128 FORWARD LENGTH=545	LOC_Os01g23530.1	protein|terpene synthase, putative, expressed	IMGA|Medtr5g062230.1	(+)-delta-cadinene synthase isozyme A chr5 25036066-25039371 H EGN_Mt100125 20111014	GO:0008152|metabolic process GO:0016106|sesquiterpenoid biosynthetic process GO:0051762|sesquiterpene biosynthetic process GO:0080027|response to herbivore	GO:0000287|magnesium ion binding GO:0010333|terpene synthase activity GO:0016829|lyase activity GO:0080016|(-)-E-beta-caryophyllene synthase activity GO:0080017|alpha-humulene synthase activity	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_04539	A	A1S	Potri.001G415100	Potri.001G415100(AS)	POPTR_0001s44080	sp|Q6Q3H3|TPSGD_VITVI	(-)-germacrene D synthase OS=Vitis vinifera GN=VIT_19s0014g04930 PE=1 SV=1	AT5G23960.2	| Symbols: TPS21 | terpene synthase 21 | chr5:8092969-8095128 FORWARD LENGTH=545	LOC_Os01g23530.1	protein|terpene synthase, putative, expressed	IMGA|Medtr5g062230.1	(+)-delta-cadinene synthase isozyme A chr5 25036066-25039371 H EGN_Mt100125 20111014	GO:0008152|metabolic process GO:0016106|sesquiterpenoid biosynthetic process GO:0051762|sesquiterpene biosynthetic process GO:0080027|response to herbivore	GO:0000287|magnesium ion binding GO:0010333|terpene synthase activity GO:0016829|lyase activity GO:0080016|(-)-E-beta-caryophyllene synthase activity GO:0080017|alpha-humulene synthase activity	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_04540	A	A2S	Potri.001G415200	Potri.001G415200(AS) Potri.001G409500(AS)	POPTR_0001s44090	sp|Q69VG1|CIGR1_ORYSJ	Chitin-inducible gibberellin-responsive protein 1 OS=Oryza sativa subsp. japonica GN=CIGR1 PE=2 SV=1	AT5G48150.2	| Symbols: PAT1 | GRAS family transcription factor | chr5:19522497-19524053 REVERSE LENGTH=490	LOC_Os07g36170.2	protein|chitin-inducible gibberellin-responsive protein, putative, expressed	IMGA|Medtr5g097480.1	Chitin-inducible gibberellin-responsive protein chr5 41660791-41664149 E EGN_Mt100125 20111014	GO:0009640|photomorphogenesis	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0004871|signal transducer activity	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_04541	A	A1S	Potri.001G415300	Potri.001G415300(AS)	POPTR_0001s44100	sp|Q9LFV3|Y5157_ARATH	Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At5g15730 OS=Arabidopsis thaliana GN=At5g15730 PE=2 SV=1	AT5G54590.2	| Symbols: CRLK1 | Protein kinase superfamily protein | chr5:22180480-22182698 FORWARD LENGTH=440	LOC_Os08g04420.2	protein|tyrosine protein kinase domain containing protein, putative, expressed	IMGA|Medtr5g019940.1	Cysteine-rich receptor-like protein kinase chr5 7305562-7308897 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0009409|response to cold	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005516|calmodulin binding GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_04542	A	A1S	Potri.001G415400	Potri.001G415400(AS)	POPTR_0001s44110	sp|Q02764|RK24_TOBAC	50S ribosomal protein L24, chloroplastic OS=Nicotiana tabacum GN=RPL24 PE=1 SV=1	AT5G54600.1	| Symbols: | Translation protein SH3-like family protein | chr5:22183046-22184403 FORWARD LENGTH=198	LOC_Os06g46930.1	protein|ribosomal protein L24, putative, expressed	NA	NA	GO:0006412|translation GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0032544|plastid translation	GO:0003735|structural constituent of ribosome	GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope GO:0015934|large ribosomal subunit
pt2_04543	A	A1S	Potri.001G415500	Potri.001G415500(AS)	POPTR_0001s44120	sp|P51110|DFRA_VITVI	Dihydroflavonol-4-reductase OS=Vitis vinifera GN=DFR PE=1 SV=1	AT4G27250.1	| Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr4:13642803-13644425 REVERSE LENGTH=354	LOC_Os06g46920.1	protein|dihydroflavonol-4-reductase, putative, expressed	IMGA|AC229724_1047.1	Dihydroflavonol 4-reductase AC229724.12 187756-183743 I EGN_Mt100125 20111014	GO:0009062|fatty acid catabolic process GO:0009686|gibberellin biosynthetic process GO:0009740|gibberellic acid mediated signaling pathway GO:0010162|seed dormancy process GO:0044237|cellular metabolic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0045551|cinnamyl-alcohol dehydrogenase activity GO:0050662|coenzyme binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04544	A	A1S	Potri.001G415600	Potri.001G415600(AS)	POPTR_0001s44130	NA	NA	AT5G54630.1	| Symbols: | zinc finger protein-related | chr5:22192607-22194260 REVERSE LENGTH=472	LOC_Os01g57650.1	protein|ZOS1-12 - C2H2 zinc finger protein, expressed	IMGA|AC229724_1046.1	C2H2 zinc finger protein AC229724.12 177025-179406 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006417|regulation of translation GO:0009657|plastid organization GO:0009965|leaf morphogenesis GO:0030154|cell differentiation GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_04545	A	A1S	Potri.001G415600	Potri.001G415600(AS)	POPTR_0001s44130	NA	NA	AT5G54630.1	| Symbols: | zinc finger protein-related | chr5:22192607-22194260 REVERSE LENGTH=472	LOC_Os01g57650.1	protein|ZOS1-12 - C2H2 zinc finger protein, expressed	IMGA|AC229724_1046.1	C2H2 zinc finger protein AC229724.12 177025-179406 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006417|regulation of translation GO:0009657|plastid organization GO:0009965|leaf morphogenesis GO:0030154|cell differentiation GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_04546	C	C1S	Potri.001G415600	Potri.001G415600(CS)	NA	NA	AT5G54630.1	| Symbols: | zinc finger protein-related | chr5:22192607-22194260 REVERSE LENGTH=472	LOC_Os01g57650.1	protein|ZOS1-12 - C2H2 zinc finger protein, expressed	IMGA|AC229724_1046.1	C2H2 zinc finger protein AC229724.12 177025-179406 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006417|regulation of translation GO:0009657|plastid organization GO:0009965|leaf morphogenesis GO:0030154|cell differentiation GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_04547	A	A1S	Potri.001G415700	Potri.001G415700(AS)	POPTR_0001s44140	sp|Q43312|H2A7_WHEAT	Protein H2A.7 OS=Triticum aestivum GN=H2A-4 PE=2 SV=3	AT1G51060.1	| Symbols: HTA10 | histone H2A 10 | chr1:18926948-18927443 FORWARD LENGTH=132	LOC_Os08g33100.1	protein|core histone H2A/H2B/H3/H4, putative, expressed	IMGA|Medtr1g011750.1	Histone H2A chr1 2542655-2541377 E EGN_Mt100125 20111014	GO:0006334|nucleosome assembly	GO:0003677|DNA binding	GO:0000786|nucleosome GO:0005618|cell wall GO:0005634|nucleus GO:0005730|nucleolus
pt2_04548	C	C1S	Potri.001G415800	Potri.001G415800(CS)	sp|P0CB23|Y4862_ARATH	Uncharacterized protein At4g38062 OS=Arabidopsis thaliana GN=At4g38062 PE=2 SV=1	AT4G38070.1	| Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr4:17876535-17882569 FORWARD LENGTH=1513	LOC_Os03g48490.1	protein|centromere protein, putative, expressed	IMGA|Medtr5g032080.1	hypothetical protein chr5 13341107-13343269 H EGN_Mt100125 20111014	NA	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005737|cytoplasm GO:0005739|mitochondrion
pt2_04549	A	A1S	Potri.001G415900	Potri.001G415900(AS)	POPTR_0001s44160	sp|Q3LSS0|C19L2_DANRE	CWF19-like protein 2 OS=Danio rerio GN=cwf19l2 PE=2 SV=1	AT1G56290.1	| Symbols: | CwfJ-like family protein | chr1:21075939-21078608 FORWARD LENGTH=692	LOC_Os03g52980.1	protein|CWF19-like 2, cell cycle control, putative, expressed	NA	NA	GO:0006312|mitotic recombination GO:0006406|mRNA export from nucleus GO:0009560|embryo sac egg cell differentiation GO:0009640|photomorphogenesis GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009909|regulation of flower development GO:0009933|meristem structural organization GO:0010074|maintenance of meristem identity GO:0010162|seed dormancy process GO:0010182|sugar mediated signaling pathway GO:0010228|vegetative to reproductive phase transition of meristem GO:0016567|protein ubiquitination GO:0019915|lipid storage GO:0050826|response to freezing	NA	GO:0005634|nucleus
pt2_04550	B	B1S	Potri.001G416000	Potri.001G416000(BS)	POPTR_0001s44170	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04551	A	A1S	Potri.001G416100	Potri.001G416100(AS)	POPTR_0001s44180	sp|Q94B77|FH5_ARATH	Formin-like protein 5 OS=Arabidopsis thaliana GN=FH5 PE=2 SV=2	AT5G54650.2	| Symbols: Fh5, ATFH5 | formin homology5 | chr5:22197856-22201649 REVERSE LENGTH=900	LOC_Os07g36150.1	protein|formin-like protein 3 precursor, putative, expressed	IMGA|AC229724_1045.1	Formin-like protein AC229724.12 163899-171363 E EGN_Mt100125 20111014	GO:0009960|endosperm development GO:0016043|cellular component organization GO:0030036|actin cytoskeleton organization GO:0030041|actin filament polymerization GO:0045010|actin nucleation GO:0048317|seed morphogenesis	GO:0003779|actin binding	GO:0005618|cell wall GO:0005737|cytoplasm GO:0005886|plasma membrane GO:0009524|phragmoplast
pt2_04552	A	A1S	Potri.001G416200	Potri.001G416200(AS)	POPTR_0001s44190	sp|Q9FIT9|HS217_ARATH	21.7 kDa class VI heat shock protein OS=Arabidopsis thaliana GN=HSP21.7 PE=2 SV=1	AT5G54660.1	| Symbols: | HSP20-like chaperones superfamily protein | chr5:22203950-22204986 FORWARD LENGTH=192	LOC_Os05g42120.1	protein|heat shock protein, putative, expressed	IMGA|Medtr5g081530.1	18.2 kDa class I heat shock protein chr5 33907234-33907931 F EGN_Mt100125 20111014	GO:0008150|biological_process GO:0009408|response to heat GO:0009644|response to high light intensity GO:0042542|response to hydrogen peroxide	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_04553	A	A3S	Potri.001G416300	Potri.001G416300(AS) Potri.001G416400(AA) Potri.011G131900(DS)	POPTR_0001s44200	sp|P46875|ATK3_ARATH	Kinesin-3 OS=Arabidopsis thaliana GN=ATK3 PE=2 SV=1	AT5G54670.1	| Symbols: ATK3, KATC | kinesin 3 | chr5:22209912-22213843 FORWARD LENGTH=754	LOC_Os04g53760.2	protein|kinesin motor domain containing protein, putative, expressed	IMGA|AC229724_1044.1	Kinesin-3 AC229724.12 156208-151910 E EGN_Mt100125 20111014	GO:0000226|microtubule cytoskeleton organization	GO:0003777|microtubule motor activity GO:0005524|ATP binding GO:0008017|microtubule binding GO:0016887|ATPase activity	GO:0005737|cytoplasm
pt2_04554	A	A3S	Potri.001G416400	Potri.001G416400(AS) Potri.001G416300(AA) Potri.011G132000(DS)	POPTR_0001s44210	sp|Q9XFT3|PSBQ1_ARATH	Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Arabidopsis thaliana GN=PSBQ1 PE=1 SV=3	AT3G01440.1	| Symbols: PQL1, PQL2 | PsbQ-like 1 | chr3:168478-169407 FORWARD LENGTH=220	LOC_Os07g01480.2	protein|oxygen evolving enhancer protein 3 domain containing protein, expressed	NA	NA	GO:0000023|maltose metabolic process GO:0009767|photosynthetic electron transport chain GO:0015979|photosynthesis GO:0019252|starch biosynthetic process GO:0019684|photosynthesis, light reaction GO:0043085|positive regulation of catalytic activity	GO:0005509|calcium ion binding GO:0045156|electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	GO:0009344|nitrite reductase complex [NAD(P)H] GO:0009507|chloroplast GO:0009523|photosystem II GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009543|chloroplast thylakoid lumen GO:0009654|oxygen evolving complex GO:0019898|extrinsic to membrane GO:0030095|chloroplast photosystem II
pt2_04555	A	A1S	Potri.001G416500	Potri.001G416500(AS)	POPTR_0001s44220	sp|Q8LDI5|CXXS1_ARATH	Thioredoxin-like protein CXXS1 OS=Arabidopsis thaliana GN=CXXS1 PE=2 SV=2	AT1G11530.1	| Symbols: ATCXXS1, CXXS1 | C-terminal cysteine residue is changed to a serine 1 | chr1:3874518-3875311 FORWARD LENGTH=118	LOC_Os04g53740.1	protein|thioredoxin, putative, expressed	IMGA|Medtr1g023140.1	Thioredoxin H-type chr1 7077093-7074970 F EGN_Mt100125 20111014	GO:0006661|phosphatidylinositol biosynthetic process GO:0006662|glycerol ether metabolic process GO:0045454|cell redox homeostasis	GO:0003756|protein disulfide isomerase activity GO:0009055|electron carrier activity GO:0015035|protein disulfide oxidoreductase activity	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_04556	A	A1S	Potri.001G416600	Potri.001G416600(AS)	POPTR_0001s44230	sp|Q9FH37|ILR3_ARATH	Transcription factor ILR3 OS=Arabidopsis thaliana GN=ILR3 PE=1 SV=1	AT5G54680.1	| Symbols: ILR3, bHLH105 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr5:22217270-22218993 FORWARD LENGTH=234	LOC_Os07g35870.1	protein|basic helix-loop-helix DND-binding domain containing protein, expressed	IMGA|contig_51584_4.1	BHLH transcription factor contig_51584 8273-5804 F PREDN 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_04557	A	A2S	Potri.001G416700	Potri.001G416700(AS) Potri.011G132500(BS)	POPTR_0001s44240	NA	NA	AT3G20680.1	| Symbols: | Domain of unknown function (DUF1995) | chr3:7230147-7231163 REVERSE LENGTH=338	LOC_Os05g42100.1	protein|expressed protein	NA	NA	GO:0008150|biological_process GO:0009965|leaf morphogenesis GO:0030154|cell differentiation GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_04558	A	A1S	Potri.001G416800	Potri.001G416800(AS)	POPTR_0001s44250	sp|Q9FH36|GAUTC_ARATH	Probable galacturonosyltransferase 12 OS=Arabidopsis thaliana GN=GAUT12 PE=2 SV=1	AT5G54690.1	| Symbols: GAUT12, LGT6, IRX8 | galacturonosyltransferase 12 | chr5:22219435-22221769 REVERSE LENGTH=535	LOC_Os12g38930.1	protein|glycosyl transferase 8 domain containing protein, putative, expressed	IMGA|contig_11902_1.1	Glycosyl transferase family 8 protein expressed contig_11902 178-869 E PREDN 20111014	GO:0010089|xylem development GO:0010413|glucuronoxylan metabolic process GO:0010417|glucuronoxylan biosynthetic process GO:0016051|carbohydrate biosynthetic process GO:0044036|cell wall macromolecule metabolic process GO:0045492|xylan biosynthetic process GO:0071555|cell wall organization	GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups GO:0047262|polygalacturonate 4-alpha-galacturonosyltransferase activity	GO:0005794|Golgi apparatus
pt2_04559	A	A1S	Potri.001G416900	Potri.001G416900(AS)	POPTR_0001s44260	sp|Q9T048|DRL27_ARATH	Disease resistance protein At4g27190 OS=Arabidopsis thaliana GN=At4g27190 PE=2 SV=1	AT4G27190.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr4:13620977-13623934 REVERSE LENGTH=985	LOC_Os01g57870.1	protein|disease resistance protein RPS2, putative, expressed	IMGA|Medtr1g041550.1	Cc-nbs resistance protein chr1 11650158-11644067 E EGN_Mt100125 20111014	GO:0006952|defense response	GO:0000166|nucleotide binding GO:0017111|nucleoside-triphosphatase activity GO:0043531|ADP binding	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_04560	A	A1S	Potri.001G417000	Potri.001G417000(AS)	POPTR_0001s44270	sp|Q8CCN5|BCAS3_MOUSE	Breast carcinoma-amplified sequence 3 homolog OS=Mus musculus GN=Bcas3 PE=1 SV=2	AT5G54730.1	| Symbols: ATATG18F, ATG18F, G18F | homolog of yeast autophagy 18 (ATG18) F | chr5:22233977-22236804 REVERSE LENGTH=763	LOC_Os01g57720.2	protein|expressed protein	IMGA|Medtr1g089110.1	hypothetical protein chr1 24394965-24398412 H EGN_Mt100125 20111014	GO:0016036|cellular response to phosphate starvation GO:0019375|galactolipid biosynthetic process GO:0042594|response to starvation GO:0042631|cellular response to water deprivation	GO:0003674|molecular_function	NA
pt2_04561	A	A1S	Potri.001G417200	Potri.001G417200(AS)	POPTR_0001s44280	NA	NA	AT3G20720.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. | chr3:7240098-7246754 FORWARD LENGTH=1199	LOC_Os04g53670.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_04562	A	A1S	Potri.001G417300	Potri.001G417300(AS)	POPTR_0001s44290	sp|Q9LT47|FIE_ARATH	Polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM OS=Arabidopsis thaliana GN=FIE PE=1 SV=2	AT3G20740.1	| Symbols: FIE, FIS3, FIE1 | Transducin/WD40 repeat-like superfamily protein | chr3:7249064-7252254 REVERSE LENGTH=369	LOC_Os08g04270.3	protein|WD domain, G-beta repeat domain containing protein, expressed	NA	NA	GO:0000003|reproduction GO:0006349|regulation of gene expression by genetic imprinting GO:0009409|response to cold GO:0009910|negative regulation of flower development GO:0010048|vernalization response GO:0016571|histone methylation GO:2000014|regulation of endosperm development	GO:0000166|nucleotide binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus GO:0005834|heterotrimeric G-protein complex GO:0043078|polar nucleus GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_04563	D	D1S	Potri.011G132900	Potri.011G132900(DS)	POPTR_0001s44300	NA	NA	AT1G51100.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 26 Blast hits to 26 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:18934342-18934977 FORWARD LENGTH=211	LOC_Os01g48500.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_04564	A	A1S	Potri.001G417400	Potri.001G417400(AS)	POPTR_0001s44310	sp|Q6NQ81|PP304_ARATH	Pentatricopeptide repeat-containing protein At4g04790, mitochondrial OS=Arabidopsis thaliana GN=At4g04790 PE=2 SV=2	AT4G04790.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:2435007-2439344 REVERSE LENGTH=821	LOC_Os02g03970.1	protein|PPR repeat domain containing protein, putative, expressed	IMGA|Medtr5g034890.1	Pentatricopeptide repeat-containing protein chr5 14738141-14749681 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_04565	A	A1S	Potri.001G417500	Potri.001G417500(AS)	POPTR_0001s44315	NA	NA	NA	NA	LOC_Os07g34390.1	protein|ankyrin repeat family protein, putative, expressed	NA	NA	GO:0008150|biological_process	NA	NA
pt2_04566	A	A1S	Potri.001G417600	Potri.001G417600(AS)	POPTR_0001s44320	sp|Q6YUU5|MDR_ORYSJ	Putative multidrug resistance protein OS=Oryza sativa subsp. japonica GN=Os02g0190300 PE=3 SV=1	AT3G28390.1	| Symbols: PGP18 | P-glycoprotein 18 | chr3:10629425-10633967 REVERSE LENGTH=1225	LOC_Os02g09720.1	protein|multidrug resistance protein, putative, expressed	IMGA|Medtr5g029750.1	ABC transporter B family member chr5 12267596-12276446 E EGN_Mt100125 20111014	GO:0006200|ATP catabolic process GO:0006810|transport GO:0010048|vernalization response GO:0010315|auxin efflux GO:0010540|basipetal auxin transport GO:0010541|acropetal auxin transport GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0048440|carpel development GO:0055085|transmembrane transport	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0005886|plasma membrane GO:0016021|integral to membrane
pt2_04567	A	A1S	Potri.001G417700	Potri.001G417700(AS)	POPTR_0001s44330	sp|Q9LHD1|AB15B_ARATH	ABC transporter B family member 15 OS=Arabidopsis thaliana GN=ABCB15 PE=1 SV=1	AT3G28345.1	| Symbols: | ABC transporter family protein | chr3:10593921-10598775 REVERSE LENGTH=1240	LOC_Os02g09720.1	protein|multidrug resistance protein, putative, expressed	IMGA|Medtr5g029750.1	ABC transporter B family member chr5 12267596-12276446 E EGN_Mt100125 20111014	GO:0006200|ATP catabolic process GO:0006810|transport GO:0010048|vernalization response GO:0010315|auxin efflux GO:0010540|basipetal auxin transport GO:0010541|acropetal auxin transport GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0048440|carpel development GO:0055085|transmembrane transport	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0005886|plasma membrane GO:0016021|integral to membrane
pt2_04568	A	A1S	Potri.001G417800	Potri.001G417800(AS)	POPTR_0001s44340	sp|Q6YUU5|MDR_ORYSJ	Putative multidrug resistance protein OS=Oryza sativa subsp. japonica GN=Os02g0190300 PE=3 SV=1	AT3G28390.1	| Symbols: PGP18 | P-glycoprotein 18 | chr3:10629425-10633967 REVERSE LENGTH=1225	LOC_Os02g09720.1	protein|multidrug resistance protein, putative, expressed	IMGA|Medtr1g086080.1	ABC transporter B family member chr1 22880421-22874428 E EGN_Mt100125 20111014	GO:0006200|ATP catabolic process GO:0006810|transport GO:0010048|vernalization response GO:0010315|auxin efflux GO:0010540|basipetal auxin transport GO:0010541|acropetal auxin transport GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0045893|positive regulation of transcription, DNA-dependent GO:0048440|carpel development GO:0055085|transmembrane transport	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0005886|plasma membrane GO:0016021|integral to membrane
pt2_04569	A	A1S	Potri.001G417900	Potri.001G417900(AS)	POPTR_0001s44350	sp|Q6YUU5|MDR_ORYSJ	Putative multidrug resistance protein OS=Oryza sativa subsp. japonica GN=Os02g0190300 PE=3 SV=1	AT3G28360.1	| Symbols: PGP16 | P-glycoprotein 16 | chr3:10611071-10616301 REVERSE LENGTH=1228	LOC_Os02g09720.1	protein|multidrug resistance protein, putative, expressed	IMGA|Medtr5g029750.1	ABC transporter B family member chr5 12267596-12276446 E EGN_Mt100125 20111014	GO:0006200|ATP catabolic process GO:0006810|transport GO:0007155|cell adhesion GO:0008361|regulation of cell size GO:0009624|response to nematode GO:0009637|response to blue light GO:0009639|response to red or far red light GO:0009640|photomorphogenesis GO:0009733|response to auxin stimulus GO:0009793|embryo development ending in seed dormancy GO:0009926|auxin polar transport GO:0009958|positive gravitropism GO:0010048|vernalization response GO:0010090|trichome morphogenesis GO:0010228|vegetative to reproductive phase transition of meristem GO:0010540|basipetal auxin transport GO:0010541|acropetal auxin transport GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0045010|actin nucleation GO:0048364|root development GO:0048440|carpel development GO:0048443|stamen development GO:0048765|root hair cell differentiation GO:0055085|transmembrane transport GO:0071555|cell wall organization	GO:0000166|nucleotide binding GO:0005515|protein binding GO:0005516|calmodulin binding GO:0005524|ATP binding GO:0010329|auxin efflux transmembrane transporter activity GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016021|integral to membrane
pt2_04570	A	A1S	Potri.001G418000	Potri.001G418000(AS)	POPTR_0001s44360	sp|O48915|NDR1_ARATH	Protein NDR1 OS=Arabidopsis thaliana GN=NDR1 PE=1 SV=1	AT3G20600.1	| Symbols: NDR1 | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | chr3:7194877-7195536 FORWARD LENGTH=219	NA	NA	NA	NA	GO:0006952|defense response GO:0009626|plant-type hypersensitive response GO:0009814|defense response, incompatible interaction GO:0009816|defense response to bacterium, incompatible interaction GO:0009817|defense response to fungus, incompatible interaction GO:0010942|positive regulation of cell death GO:0042742|defense response to bacterium	GO:0004871|signal transducer activity GO:0005515|protein binding	GO:0005886|plasma membrane GO:0016020|membrane GO:0046658|anchored to plasma membrane
pt2_04571	C	C1S	Potri.004G177400	Potri.004G177400(CS)	sp|P80093|PDS_CAPAN	15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Capsicum annuum GN=PDS PE=1 SV=1	AT4G14210.1	| Symbols: PDS3, PDS, PDE226 | phytoene desaturase 3 | chr4:8190426-8194769 REVERSE LENGTH=566	LOC_Os04g47290.2	protein|amine oxidase, putative, expressed	NA	NA	GO:0010155|regulation of proton transport GO:0016117|carotenoid biosynthetic process GO:0016120|carotene biosynthetic process GO:0046777|protein autophosphorylation GO:0055114|oxidation-reduction process	GO:0016166|phytoene dehydrogenase activity GO:0016491|oxidoreductase activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009536|plastid GO:0009941|chloroplast envelope
pt2_04572	A	A4S	Potri.001G411300	Potri.001G411300(AS) Potri.001G418100(AS) Potri.001G410800(BS) Potri.001G411400(BS)	POPTR_0001s44380	sp|O81832|Y4729_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana GN=At4g27290 PE=2 SV=4	AT4G27290.1	| Symbols: | S-locus lectin protein kinase family protein | chr4:13666281-13669202 FORWARD LENGTH=783	LOC_Os01g57560.1	protein|serine/threonine-protein kinase receptor precursor, putative, expressed	IMGA|Medtr5g055070.1	Cysteine-rich receptor-like protein kinase chr5 22150681-22146797 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0048544|recognition of pollen GO:0048765|root hair cell differentiation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_04573	A	A1S	Potri.001G418200	Potri.001G418200(AS)	POPTR_0001s44390	sp|O49561|G2OX8_ARATH	Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=2	AT4G21200.1	| Symbols: ATGA2OX8, GA2OX8 | gibberellin 2-oxidase 8 | chr4:11302751-11306601 FORWARD LENGTH=338	LOC_Os04g44150.1	protein|gibberellin 2-beta-dioxygenase 7, putative, expressed	IMGA|Medtr5g005570.1	Gibberellin 2-beta-dioxygenase chr5 271078-268212 H EGN_Mt100125 20111014	GO:0009685|gibberellin metabolic process GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors GO:0052635|C-20 gibberellin 2-beta-dioxygenase activity	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_04574	C	C1S	Potri.001G418200	Potri.001G418200(CS)	sp|O49561|G2OX8_ARATH	Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=2	AT4G21200.1	| Symbols: ATGA2OX8, GA2OX8 | gibberellin 2-oxidase 8 | chr4:11302751-11306601 FORWARD LENGTH=338	LOC_Os04g44150.1	protein|gibberellin 2-beta-dioxygenase 7, putative, expressed	IMGA|Medtr5g005570.1	Gibberellin 2-beta-dioxygenase chr5 271078-268212 H EGN_Mt100125 20111014	GO:0009685|gibberellin metabolic process GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors GO:0052635|C-20 gibberellin 2-beta-dioxygenase activity	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_04575	A	A1S	Potri.001G418300	Potri.001G418300(AS)	POPTR_0001s44410	NA	NA	NA	NA	NA	NA	NA	NA	GO:0009651|response to salt stress GO:0009685|gibberellin metabolic process GO:0009686|gibberellin biosynthetic process GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors GO:0052635|C-20 gibberellin 2-beta-dioxygenase activity	GO:0009507|chloroplast
pt2_04576	G	G1	NA	NA	POPTR_0001s44420	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04577	B	B1S	Potri.001G418400	Potri.001G418400(BS)	POPTR_0001s44430	sp|Q5ZI57|TPPC3_CHICK	Trafficking protein particle complex subunit 3 OS=Gallus gallus GN=TRAPPC3 PE=2 SV=1	AT5G54750.1	| Symbols: | Transport protein particle (TRAPP) component | chr5:22242080-22243477 FORWARD LENGTH=186	LOC_Os07g44790.1	protein|transport protein particle component, Bet3, domain containing protein, expressed	NA	NA	GO:0006888|ER to Golgi vesicle-mediated transport GO:0030244|cellulose biosynthetic process GO:0048193|Golgi vesicle transport	GO:0003674|molecular_function	GO:0005794|Golgi apparatus
pt2_04578	A	A2S	Potri.001G418500	Potri.001G418500(AS) Potri.017G036800(DS)	POPTR_0001s44440	sp|P69322|UBIQP_PEA	Polyubiquitin OS=Pisum sativum GN=PU1 PE=2 SV=2	AT4G05320.6	| Symbols: UBQ10 | polyubiquitin 10 | chr4:2718559-2719932 FORWARD LENGTH=381	LOC_Os05g42424.1	protein|ubiquitin family protein, putative, expressed	IMGA|Medtr5g092700.1	Bi-ubiquitin chr5 39454527-39453230 F EGN_Mt100125 20111014	GO:0006464|cellular protein modification process GO:0007568|aging GO:0009751|response to salicylic acid stimulus	NA	NA
pt2_04579	A	A3S	Potri.001G418500	Potri.001G418500(AS) Potri.001G263000(BS) Potri.017G135600(DS)	POPTR_0001s44440	sp|P69322|UBIQP_PEA	Polyubiquitin OS=Pisum sativum GN=PU1 PE=2 SV=2	AT4G05320.6	| Symbols: UBQ10 | polyubiquitin 10 | chr4:2718559-2719932 FORWARD LENGTH=381	LOC_Os05g42424.1	protein|ubiquitin family protein, putative, expressed	IMGA|Medtr5g092700.1	Bi-ubiquitin chr5 39454527-39453230 F EGN_Mt100125 20111014	GO:0006464|cellular protein modification process GO:0007568|aging GO:0009751|response to salicylic acid stimulus	NA	NA
pt2_04580	A	A1S	Potri.001G418600	Potri.001G418600(AS)	POPTR_0001s44450	sp|Q94JV4|SUI12_ARATH	Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana GN=At1g54290 PE=2 SV=1	AT1G54290.1	| Symbols: | Translation initiation factor SUI1 family protein | chr1:20268710-20269390 REVERSE LENGTH=113	LOC_Os01g58220.1	protein|translation initiation factor SUI1, putative, expressed	IMGA|Medtr5g092820.1	Translation factor SUI1-like protein chr5 39502607-39501143 F EGN_Mt100125 20111014	GO:0006413|translational initiation	GO:0003743|translation initiation factor activity	GO:0005737|cytoplasm
pt2_04581	A	A2S	Potri.001G418600	Potri.001G418600(AS) Potri.011G134700(DS)	POPTR_0001s44450	sp|Q94JV4|SUI12_ARATH	Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana GN=At1g54290 PE=2 SV=1	AT1G54290.1	| Symbols: | Translation initiation factor SUI1 family protein | chr1:20268710-20269390 REVERSE LENGTH=113	LOC_Os01g58220.1	protein|translation initiation factor SUI1, putative, expressed	IMGA|Medtr5g092820.1	Translation factor SUI1-like protein chr5 39502607-39501143 F EGN_Mt100125 20111014	GO:0006413|translational initiation	GO:0003743|translation initiation factor activity	GO:0005737|cytoplasm
pt2_04582	A	A1A	Potri.001G418800	Potri.001G418800(AA)	POPTR_0001s44460	sp|B3QLP5|LPXK_CHLP8	Tetraacyldisaccharide 4'-kinase OS=Chlorobaculum parvum (strain NCIB 8327) GN=lpxK PE=3 SV=1	AT3G20480.1	| Symbols: | tetraacyldisaccharide 4'-kinase family protein | chr3:7151497-7153369 REVERSE LENGTH=395	LOC_Os07g01200.1	protein|tetraacyldisaccharide 4-kinase, putative, expressed	IMGA|Medtr5g048420.1	hypothetical protein chr5 20799324-20800254 H EGN_Mt100125 20111014	GO:0009245|lipid A biosynthetic process GO:0019243|methylglyoxal catabolic process to D-lactate	GO:0005524|ATP binding GO:0009029|tetraacyldisaccharide 4'-kinase activity	GO:0005739|mitochondrion GO:0016020|membrane
pt2_04583	A	A1S	Potri.001G418800	Potri.001G418800(AS)	POPTR_0001s44470	sp|B3QLP5|LPXK_CHLP8	Tetraacyldisaccharide 4'-kinase OS=Chlorobaculum parvum (strain NCIB 8327) GN=lpxK PE=3 SV=1	AT3G20480.1	| Symbols: | tetraacyldisaccharide 4'-kinase family protein | chr3:7151497-7153369 REVERSE LENGTH=395	LOC_Os07g01200.1	protein|tetraacyldisaccharide 4-kinase, putative, expressed	IMGA|Medtr5g048420.1	hypothetical protein chr5 20799324-20800254 H EGN_Mt100125 20111014	GO:0009245|lipid A biosynthetic process GO:0019243|methylglyoxal catabolic process to D-lactate	GO:0005524|ATP binding GO:0009029|tetraacyldisaccharide 4'-kinase activity	GO:0005739|mitochondrion GO:0016020|membrane
pt2_04584	A	A1S	Potri.001G418900	Potri.001G418900(AS)	POPTR_0001s44480	sp|Q94C53|DDRGK_ARATH	DDRGK domain-containing protein 1 OS=Arabidopsis thaliana GN=At4g27120 PE=2 SV=1	AT4G27120.2	| Symbols: | CONTAINS InterPro DOMAIN/s: DDRGK domain (InterPro:IPR019153); Has 14775 Blast hits to 8764 proteins in 778 species: Archae - 29; Bacteria - 1878; Metazoa - 5164; Fungi - 1447; Plants - 582; Viruses - 164; Other Eukaryotes - 5511 (source: NCBI BLink). | chr4:13602210-13604227 REVERSE LENGTH=298	LOC_Os07g01320.1	protein|expressed protein	NA	NA	GO:0030244|cellulose biosynthetic process GO:0048193|Golgi vesicle transport	NA	NA
pt2_04585	A	A1S	Potri.001G419000	Potri.001G419000(AS)	POPTR_0001s44490	sp|Q9LJU0|CBL10_ARATH	COBRA-like protein 10 OS=Arabidopsis thaliana GN=COBL10 PE=2 SV=1	AT3G20580.1	| Symbols: COBL10 | COBRA-like protein 10 precursor | chr3:7188063-7190416 REVERSE LENGTH=672	LOC_Os06g47110.1	protein|COBRA-like protein precursor, putative, expressed	IMGA|Medtr5g005590.1	COBRA-like protein chr5 278632-282057 H EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005886|plasma membrane GO:0031225|anchored to membrane
pt2_04586	A	A1S	Potri.001G419100	Potri.001G419100(AS)	POPTR_0001s44500	sp|Q9CXF4|TBC15_MOUSE	TBC1 domain family member 15 OS=Mus musculus GN=Tbc1d15 PE=1 SV=1	AT4G27100.1	| Symbols: | Ypt/Rab-GAP domain of gyp1p superfamily protein | chr4:13595845-13598534 FORWARD LENGTH=436	LOC_Os11g37690.1	protein|TBC domain containing protein, expressed	IMGA|Medtr1g007590.3	GTPase activating-like protein chr1 1018744-1015229 E EGN_Mt100125 20111014	GO:0032313|regulation of Rab GTPase activity	GO:0005097|RAB GTPase activator activity	GO:0005622|intracellular GO:0005634|nucleus GO:0005737|cytoplasm GO:0005739|mitochondrion
pt2_04587	A	A1S	Potri.001G419200	Potri.001G419200(AS)	POPTR_0001s44510	sp|Q8LC95|ENL3_ARATH	Early nodulin-like protein 3 OS=Arabidopsis thaliana GN=At5g25090 PE=1 SV=2	AT3G20570.1	| Symbols: ENODL9, AtENODL9 | early nodulin-like protein 9 | chr3:7186754-7187453 REVERSE LENGTH=203	LOC_Os01g57880.1	protein|plastocyanin-like domain containing protein, putative, expressed	IMGA|Medtr5g006040.1	Early nodulin-like protein chr5 502223-501280 F EGN_Mt100125 20111014	NA	GO:0005507|copper ion binding GO:0009055|electron carrier activity	GO:0005886|plasma membrane GO:0031225|anchored to membrane
pt2_04588	A	A2S	Potri.001G419300	Potri.001G419300(AS) Potri.011G135500(DS)	POPTR_0001s44520	sp|Q9LJU2|PDI53_ARATH	Protein disulfide-isomerase 5-3 OS=Arabidopsis thaliana GN=PDIL5-3 PE=2 SV=1	AT3G20560.1	| Symbols: ATPDIL5-3, PDI12, ATPDI12, PDIL5-3 | PDI-like 5-3 | chr3:7182182-7186390 FORWARD LENGTH=483	LOC_Os07g34030.1	protein|OsPDIL5-4 protein disulfide isomerase PDIL5-4, expressed	IMGA|Medtr5g062720.1	Endoplasmic reticulum-Golgi intermediate compartment protein chr5 25295217-25286148 F EGN_Mt100125 20111014	GO:0030244|cellulose biosynthetic process GO:0045454|cell redox homeostasis GO:0048193|Golgi vesicle transport	GO:0003756|protein disulfide isomerase activity	NA
pt2_04589	A	A1S	Potri.001G419400	Potri.001G419400(AS)	POPTR_0001s44530	NA	NA	AT3G21710.2	| Symbols: | unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr3:7648380-7649533 FORWARD LENGTH=211	NA	NA	NA	NA	GO:0000041|transition metal ion transport GO:0006826|iron ion transport GO:0008150|biological_process GO:0010106|cellular response to iron ion starvation GO:0010167|response to nitrate GO:0010413|glucuronoxylan metabolic process GO:0015706|nitrate transport GO:0045492|xylan biosynthetic process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04590	G	G1	NA	NA	POPTR_0001s44540	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04591	A	A1S	Potri.001G419600	Potri.001G419600(AS)	POPTR_0001s44545	NA	NA	AT3G15160.1	| Symbols: | unknown protein; Has 266 Blast hits to 264 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 58; Fungi - 0; Plants - 199; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). | chr3:5104582-5108279 FORWARD LENGTH=562	LOC_Os04g53530.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04592	G	G1	NA	NA	POPTR_0001s44550	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04593	R	R	NA	NA	POPTR_0001s44560	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04594	A	A4S	Potri.001G419800	Potri.001G419800(AS) Potri.001G443800(DS) Potri.001G446700(DS) Potri.001G445700(DS)	POPTR_0001s44570	sp|O81825|DRL28_ARATH	Probable disease resistance protein At4g27220 OS=Arabidopsis thaliana GN=At4g27220 PE=2 SV=1	AT4G27220.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr4:13633953-13636712 REVERSE LENGTH=919	LOC_Os11g29090.1	protein|NB-ARC/LRR disease resistance protein, putative, expressed	IMGA|Medtr1g041550.1	Cc-nbs resistance protein chr1 11650158-11644067 E EGN_Mt100125 20111014	GO:0006952|defense response	GO:0043531|ADP binding	GO:0005634|nucleus
pt2_04595	C	C1S	Potri.001G419900	Potri.001G419900(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04596	C	C2S	Potri.001G420000	Potri.001G420000(CS) Potri.018G048800(CS)	sp|Q9T048|DRL27_ARATH	Disease resistance protein At4g27190 OS=Arabidopsis thaliana GN=At4g27190 PE=2 SV=1	AT4G27190.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr4:13620977-13623934 REVERSE LENGTH=985	LOC_Os01g72680.1	protein|disease resistance protein RPS2, putative, expressed	IMGA|Medtr1g044100.1	Cc-nbs resistance protein chr1 12820615-12813448 H EGN_Mt100125 20111014	GO:0006952|defense response	GO:0000166|nucleotide binding GO:0017111|nucleoside-triphosphatase activity GO:0043531|ADP binding	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_04597	A	A1S	Potri.001G420000	Potri.001G420000(AS)	POPTR_0001s44590	sp|Q9T048|DRL27_ARATH	Disease resistance protein At4g27190 OS=Arabidopsis thaliana GN=At4g27190 PE=2 SV=1	AT4G27190.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr4:13620977-13623934 REVERSE LENGTH=985	LOC_Os01g72680.1	protein|disease resistance protein RPS2, putative, expressed	IMGA|Medtr1g044100.1	Cc-nbs resistance protein chr1 12820615-12813448 H EGN_Mt100125 20111014	GO:0006952|defense response	GO:0000166|nucleotide binding GO:0017111|nucleoside-triphosphatase activity GO:0043531|ADP binding	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_04598	A	A1S	Potri.001G420100	Potri.001G420100(AS)	POPTR_0001s44600	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04599	A	A1S	Potri.001G420200	Potri.001G420200(AS)	POPTR_0001s44610	sp|Q9M5A9|GPT1_ARATH	Glucose-6-phosphate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=GPT1 PE=2 SV=1	AT5G54800.1	| Symbols: GPT1, ATGPT1 | glucose 6-phosphate/phosphate translocator 1 | chr5:22261408-22263562 FORWARD LENGTH=388	LOC_Os08g08840.2	protein|phosphate/phosphate translocator, putative, expressed	IMGA|Medtr5g044220.1	Triose phosphate/phosphate translocator chr5 19022441-19026071 H EGN_Mt100125 20111014	GO:0006007|glucose catabolic process GO:0006810|transport GO:0006863|purine nucleobase transport GO:0007033|vacuole organization GO:0009553|embryo sac development GO:0009624|response to nematode GO:0009790|embryo development GO:0010152|pollen maturation GO:0015713|phosphoglycerate transport GO:0015714|phosphoenolpyruvate transport GO:0015760|glucose-6-phosphate transport GO:0034389|lipid particle organization GO:0035436|triose phosphate transmembrane transport GO:0055085|transmembrane transport	GO:0005215|transporter activity GO:0005315|inorganic phosphate transmembrane transporter activity GO:0015120|phosphoglycerate transmembrane transporter activity GO:0015152|glucose-6-phosphate transmembrane transporter activity GO:0015297|antiporter activity GO:0071917|triose-phosphate transmembrane transporter activity	GO:0009507|chloroplast GO:0009536|plastid GO:0016021|integral to membrane
pt2_04600	A	A2S	Potri.001G420300	Potri.001G420300(AS) Potri.011G136000(DS)	POPTR_0001s44620	sp|O50046|TRPB_CAMAC	Tryptophan synthase beta chain 2, chloroplastic OS=Camptotheca acuminata GN=TSB PE=2 SV=1	AT4G27070.1	| Symbols: TSB2 | tryptophan synthase beta-subunit 2 | chr4:13586564-13588619 FORWARD LENGTH=475	LOC_Os08g04180.1	protein|tryptophan synthase beta chain 1, putative, expressed	IMGA|Medtr5g005670.1	Tryptophan synthase beta chain chr5 329628-332853 E EGN_Mt100125 20111014	GO:0000162|tryptophan biosynthetic process GO:0006568|tryptophan metabolic process GO:0008152|metabolic process	GO:0003824|catalytic activity GO:0004834|tryptophan synthase activity GO:0030170|pyridoxal phosphate binding	GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope
pt2_04601	A	A2S	Potri.001G420400	Potri.001G420400(AS) Potri.011G136100(DS)	POPTR_0001s44630	sp|Q8W4D8|DDL_ARATH	FHA domain-containing protein DDL OS=Arabidopsis thaliana GN=DDL PE=1 SV=1	AT3G20550.1	| Symbols: DDL | SMAD/FHA domain-containing protein | chr3:7174695-7177600 REVERSE LENGTH=314	LOC_Os05g46780.1	protein|transposon protein, putative, CACTA, En/Spm sub-class, expressed	IMGA|Medtr5g081620.1	FHA domain-containing protein DDL chr5 33954790-33951744 H EGN_Mt100125 20111014	GO:0000398|mRNA splicing, via spliceosome GO:0000956|nuclear-transcribed mRNA catabolic process GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0006355|regulation of transcription, DNA-dependent GO:0007267|cell-cell signaling GO:0008283|cell proliferation GO:0008284|positive regulation of cell proliferation GO:0009616|virus induced gene silencing GO:0009640|photomorphogenesis GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009909|regulation of flower development GO:0009933|meristem structural organization GO:0010048|vernalization response GO:0010162|seed dormancy process GO:0010182|sugar mediated signaling pathway GO:0010228|vegetative to reproductive phase transition of meristem GO:0010267|production of ta-siRNAs involved in RNA interference GO:0016567|protein ubiquitination GO:0016569|covalent chromatin modification GO:0019915|lipid storage GO:0030422|production of siRNA involved in RNA interference GO:0031047|gene silencing by RNA GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0043687|post-translational protein modification GO:0045893|positive regulation of transcription, DNA-dependent GO:0048573|photoperiodism, flowering GO:0048638|regulation of developmental growth GO:0050826|response to freezing	GO:0003674|molecular_function GO:0003723|RNA binding GO:0005515|protein binding	GO:0005634|nucleus GO:0005829|cytosol GO:0009507|chloroplast
pt2_04602	A	A2S	Potri.001G420400	Potri.001G420400(AS) Potri.011G136100(DS)	POPTR_0001s44640	sp|Q8W4D8|DDL_ARATH	FHA domain-containing protein DDL OS=Arabidopsis thaliana GN=DDL PE=1 SV=1	AT3G20550.1	| Symbols: DDL | SMAD/FHA domain-containing protein | chr3:7174695-7177600 REVERSE LENGTH=314	LOC_Os05g46780.1	protein|transposon protein, putative, CACTA, En/Spm sub-class, expressed	IMGA|Medtr5g081620.1	FHA domain-containing protein DDL chr5 33954790-33951744 H EGN_Mt100125 20111014	GO:0000398|mRNA splicing, via spliceosome GO:0000956|nuclear-transcribed mRNA catabolic process GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0006355|regulation of transcription, DNA-dependent GO:0007267|cell-cell signaling GO:0008283|cell proliferation GO:0008284|positive regulation of cell proliferation GO:0009616|virus induced gene silencing GO:0009640|photomorphogenesis GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009909|regulation of flower development GO:0009933|meristem structural organization GO:0010048|vernalization response GO:0010162|seed dormancy process GO:0010182|sugar mediated signaling pathway GO:0010228|vegetative to reproductive phase transition of meristem GO:0010267|production of ta-siRNAs involved in RNA interference GO:0016567|protein ubiquitination GO:0016569|covalent chromatin modification GO:0019915|lipid storage GO:0030422|production of siRNA involved in RNA interference GO:0031047|gene silencing by RNA GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0043687|post-translational protein modification GO:0045893|positive regulation of transcription, DNA-dependent GO:0048573|photoperiodism, flowering GO:0048638|regulation of developmental growth GO:0050826|response to freezing	GO:0003674|molecular_function GO:0003723|RNA binding GO:0005515|protein binding	GO:0005634|nucleus GO:0005829|cytosol GO:0009507|chloroplast
pt2_04603	A	A1S	Potri.001G420500	Potri.001G420500(AS)	POPTR_0001s44650	sp|Q9M1Q1|FB215_ARATH	F-box protein At3g62230 OS=Arabidopsis thaliana GN=At3g62230 PE=1 SV=1	AT3G62230.1	| Symbols: | F-box family protein | chr3:23031589-23032974 FORWARD LENGTH=461	LOC_Os12g03390.1	protein|OsFBX435 - F-box domain containing protein, expressed	IMGA|Medtr5g080150.1	F-box protein chr5 33287499-33285111 H EGN_Mt100125 20111014	GO:0009827|plant-type cell wall modification GO:0009860|pollen tube growth GO:0048235|pollen sperm cell differentiation	GO:0003674|molecular_function	NA
pt2_04604	A	A1S	Potri.001G420600	Potri.001G420600(AS)	POPTR_0001s44660	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006364|rRNA processing GO:0006508|proteolysis GO:0009902|chloroplast relocation GO:0010027|thylakoid membrane organization GO:0010207|photosystem II assembly GO:0010267|production of ta-siRNAs involved in RNA interference GO:0019761|glucosinolate biosynthetic process GO:0034660|ncRNA metabolic process GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0035304|regulation of protein dephosphorylation GO:0042793|transcription from plastid promoter GO:0045893|positive regulation of transcription, DNA-dependent GO:0051604|protein maturation GO:0051607|defense response to virus	GO:0008233|peptidase activity GO:0008236|serine-type peptidase activity	GO:0009507|chloroplast GO:0009526|plastid envelope GO:0009535|chloroplast thylakoid membrane GO:0016020|membrane
pt2_04605	A	A1S	Potri.001G420700	Potri.001G420700(AS)	POPTR_0001s44670	sp|P87027|SPG1_SCHPO	Septum-promoting GTP-binding protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=spg1 PE=1 SV=1	AT5G54840.1	| Symbols: ATSGP1, SGP1 | Ras-related small GTP-binding family protein | chr5:22276611-22278328 REVERSE LENGTH=288	LOC_Os07g33850.2	protein|ras-related protein, putative, expressed	IMGA|Medtr5g092060.1	Ras-related protein Rab-37 chr5 39153729-39150706 E EGN_Mt100125 20111014	GO:0007264|small GTPase mediated signal transduction GO:0016192|vesicle-mediated transport	GO:0005525|GTP binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_04606	A	A1S	Potri.001G420800	Potri.001G420800(AS)	POPTR_0001s44680	NA	NA	AT3G47860.1	| Symbols: CHL | chloroplastic lipocalin | chr3:17656778-17658269 REVERSE LENGTH=353	LOC_Os04g53490.1	protein|OsCHL Chloroplastic lipocalin, expressed	IMGA|Medtr5g092080.2	Apolipoprotein D chr5 39162427-39167215 F EGN_Mt100125 20111014	GO:0006979|response to oxidative stress	NA	GO:0005576|extracellular region GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0031977|thylakoid lumen
pt2_04607	A	A1S	Potri.001G420900	Potri.001G420900(AS)	POPTR_0001s44690	sp|Q8VY88|LTD_ARATH	Protein LHCP TRANSLOCATION DEFECT OS=Arabidopsis thaliana GN=LTD PE=1 SV=1	AT1G50900.1	| Symbols: GDC1 | Ankyrin repeat family protein | chr1:18866272-18867014 FORWARD LENGTH=175	LOC_Os07g33660.1	protein|expressed protein	NA	NA	GO:0006098|pentose-phosphate shunt GO:0006655|phosphatidylglycerol biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0080167|response to karrikin GO:0090391|granum assembly	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_04608	A	A2S	Potri.001G421000	Potri.001G421000(AS) Potri.011G136600(DS)	POPTR_0001s44700	NA	NA	AT5G54850.1	| Symbols: | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:22280755-22281363 REVERSE LENGTH=202	NA	NA	IMGA|Medtr5g092090.1	hypothetical protein chr5 39172931-39170835 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_04609	A	A1S	Potri.001G421200	Potri.001G421200(AS)	POPTR_0001s44710	sp|Q9T041|MAPT_ARATH	Microtubule-associated protein TORTIFOLIA1 OS=Arabidopsis thaliana GN=TOR1 PE=1 SV=2	AT4G27060.1	| Symbols: TOR1, SPR2, CN | ARM repeat superfamily protein | chr4:13581581-13585070 REVERSE LENGTH=864	LOC_Os07g33630.1	protein|HEAT repeat family protein, putative, expressed	IMGA|contig_8371_1.1	Microtubule-associated protein TORTIFOLIA1 contig_8371 194-3290 E PREDN 20111014	GO:0000226|microtubule cytoskeleton organization GO:0006396|RNA processing GO:0007275|multicellular organismal development GO:0009826|unidimensional cell growth GO:0010031|circumnutation	GO:0008017|microtubule binding	GO:0009507|chloroplast GO:0010005|cortical microtubule, transverse to long axis
pt2_04610	A	A2S	Potri.001G421300	Potri.001G421300(AS) Potri.001G421200(AA)	POPTR_0001s44720	sp|O32801|DPO1_LACLM	DNA polymerase I OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=polA PE=3 SV=2	AT3G20540.2	| Symbols: POLGAMMA1 | polymerase gamma 1 | chr3:7168261-7173357 FORWARD LENGTH=1049	LOC_Os08g07840.1	protein|PolI-like DNA polymerase, putative, expressed	IMGA|Medtr5g092100.1	DNA polymerase chr5 39182371-39174307 E EGN_Mt100125 20111014	GO:0006139|nucleobase-containing compound metabolic process GO:0006260|DNA replication GO:0006264|mitochondrial DNA replication GO:0033259|plastid DNA replication	GO:0003676|nucleic acid binding GO:0003677|DNA binding GO:0003887|DNA-directed DNA polymerase activity GO:0008408|3'-5' exonuclease activity	GO:0005622|intracellular GO:0005634|nucleus GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_04611	G	G1	NA	NA	POPTR_0001s44730	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04612	A	A1S	Potri.001G421400	Potri.001G421400(AS)	POPTR_0001s44740	sp|Q9FE20|PBS1_ARATH	Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1	AT3G20530.1	| Symbols: | Protein kinase superfamily protein | chr3:7166318-7167806 FORWARD LENGTH=386	LOC_Os01g71000.1	protein|protein kinase APK1B, chloroplast precursor, putative, expressed	IMGA|Medtr5g092120.1	Serine/threonine protein kinase chr5 39187993-39185584 F EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0009507|chloroplast
pt2_04613	A	A1S	Potri.001G421500	Potri.001G421500(AS)	POPTR_0001s44750	sp|Q9LNG5|PPP7L_ARATH	Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana GN=At1g48120 PE=2 SV=1	AT1G32120.1	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Aminotransferase-like, plant mobile domain (InterPro:IPR019557), Protein of unknown function DUF716 (InterPro:IPR006904); BEST Arabidopsis thaliana protein match is: Aminotransferase-like, plant mobile domain family protein (TAIR:AT1G51538.1); Has 16736 Blast hits to 9656 proteins in 576 species: Archae - 4; Bacteria - 1182; Metazoa - 7098; Fungi - 2631; Plants - 1178; Viruses - 174; Other Eukaryotes - 4469 (source: NCBI BLink). | chr1:11552926-11558608 FORWARD LENGTH=1206	LOC_Os03g36760.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0016020|membrane
pt2_04614	D	D1S	Potri.001G421600	Potri.001G421600(DS)	POPTR_0001s44760	sp|Q9LNG5|PPP7L_ARATH	Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana GN=At1g48120 PE=2 SV=1	AT1G32120.1	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Aminotransferase-like, plant mobile domain (InterPro:IPR019557), Protein of unknown function DUF716 (InterPro:IPR006904); BEST Arabidopsis thaliana protein match is: Aminotransferase-like, plant mobile domain family protein (TAIR:AT1G51538.1); Has 16736 Blast hits to 9656 proteins in 576 species: Archae - 4; Bacteria - 1182; Metazoa - 7098; Fungi - 2631; Plants - 1178; Viruses - 174; Other Eukaryotes - 4469 (source: NCBI BLink). | chr1:11552926-11558608 FORWARD LENGTH=1206	LOC_Os03g36760.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0016020|membrane
pt2_04615	A	A1S	Potri.001G421800	Potri.001G421800(AS)	POPTR_0001s44770	sp|Q9LNG5|PPP7L_ARATH	Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana GN=At1g48120 PE=2 SV=1	AT1G32120.1	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Aminotransferase-like, plant mobile domain (InterPro:IPR019557), Protein of unknown function DUF716 (InterPro:IPR006904); BEST Arabidopsis thaliana protein match is: Aminotransferase-like, plant mobile domain family protein (TAIR:AT1G51538.1); Has 16736 Blast hits to 9656 proteins in 576 species: Archae - 4; Bacteria - 1182; Metazoa - 7098; Fungi - 2631; Plants - 1178; Viruses - 174; Other Eukaryotes - 4469 (source: NCBI BLink). | chr1:11552926-11558608 FORWARD LENGTH=1206	LOC_Os03g36760.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0016020|membrane
pt2_04616	A	A1S	Potri.001G421900	Potri.001G421900(AS)	POPTR_0001s44780	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_04617	A	A2S	Potri.001G422000	Potri.001G422000(AS) Potri.001G422300(BS)	POPTR_0001s44790	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04618	R	R	NA	NA	POPTR_0001s44800	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04619	C	C1S	Potri.001G422300	Potri.001G422300(CS)	NA	NA	AT1G50830.1	| Symbols: | Aminotransferase-like, plant mobile domain family protein | chr1:18835559-18837865 REVERSE LENGTH=768	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04620	A	A2S	Potri.001G422300	Potri.001G422300(AS) Potri.001G422000(BS)	POPTR_0001s44820	NA	NA	AT1G50830.1	| Symbols: | Aminotransferase-like, plant mobile domain family protein | chr1:18835559-18837865 REVERSE LENGTH=768	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04621	A	A4S	Potri.001G422400	Potri.001G422400(AS) Potri.012G010400(BS) Potri.004G149700(BS) Potri.005G009200(BS)	POPTR_0001s44830	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04622	A	A1S	Potri.001G425000	Potri.001G425000(AS)	POPTR_0001s44840	NA	NA	AT1G32120.1	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Aminotransferase-like, plant mobile domain (InterPro:IPR019557), Protein of unknown function DUF716 (InterPro:IPR006904); BEST Arabidopsis thaliana protein match is: Aminotransferase-like, plant mobile domain family protein (TAIR:AT1G51538.1); Has 16736 Blast hits to 9656 proteins in 576 species: Archae - 4; Bacteria - 1182; Metazoa - 7098; Fungi - 2631; Plants - 1178; Viruses - 174; Other Eukaryotes - 4469 (source: NCBI BLink). | chr1:11552926-11558608 FORWARD LENGTH=1206	LOC_Os03g36830.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0016020|membrane
pt2_04623	A	A1S	Potri.001G424900	Potri.001G424900(AS)	POPTR_0001s44850	sp|P14875|RT14_OENBE	Ribosomal protein S14, mitochondrial OS=Oenothera berteriana GN=RPS14 PE=3 SV=2	AT2G34520.1	| Symbols: RPS14 | mitochondrial ribosomal protein S14 | chr2:14548218-14548712 REVERSE LENGTH=164	LOC_Os08g02640.1	protein|succinate dehydrogenase iron-sulfur subunit 2,mitochondrial precursor, putative, expressed	IMGA|Medtr1g006190.1	Ribosomal protein L5 chr1 439259-440122 H EGN_Mt100125 20111014	GO:0006354|DNA-dependent transcription, elongation GO:0006412|translation GO:0009853|photorespiration	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005739|mitochondrion GO:0005763|mitochondrial small ribosomal subunit GO:0005840|ribosome GO:0009507|chloroplast
pt2_04624	R	R	NA	NA	POPTR_0001s44860	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04625	A	A2S	Potri.001G424700	Potri.001G424700(AS) Potri.011G137600(DS)	POPTR_0001s44870	sp|A6QLM0|TM189_BOVIN	Transmembrane protein 189 OS=Bos taurus GN=TMEM189 PE=2 SV=1	AT4G27030.1	| Symbols: FAD4, FADA | fatty acid desaturase A | chr4:13571951-13572922 FORWARD LENGTH=323	LOC_Os08g08850.1	protein|carotenoid synthesis regulator CarF, putative, expressed	NA	NA	GO:0006636|unsaturated fatty acid biosynthetic process GO:0046471|phosphatidylglycerol metabolic process GO:0080167|response to karrikin	GO:0016881|acid-amino acid ligase activity GO:0052637|delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity	GO:0009507|chloroplast
pt2_04626	A	A1S	Potri.001G424600	Potri.001G424600(AS)	POPTR_0001s44880	sp|Q5M759|VP221_ARATH	Vacuolar protein sorting-associated protein 22 homolog 1 OS=Arabidopsis thaliana GN=VP22-1 PE=2 SV=2	AT4G27040.4	| Symbols: VPS22 | EAP30/Vps36 family protein | chr4:13573061-13574576 REVERSE LENGTH=250	LOC_Os09g36020.1	protein|EAP30/Vps36 family domain containing protein, expressed	NA	NA	GO:0016192|vesicle-mediated transport	GO:0003674|molecular_function	GO:0000814|ESCRT II complex GO:0005737|cytoplasm
pt2_04627	A	A2S	Potri.001G424500	Potri.001G424500(AS) Potri.011G137700(DS)	POPTR_0001s44890	NA	NA	AT4G27020.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G54870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr4:13568604-13571381 REVERSE LENGTH=523	LOC_Os01g58114.1	protein|expressed protein	IMGA|Medtr5g092140.1	hypothetical protein chr5 39198609-39203608 E EGN_Mt100125 20111014	NA	GO:0003674|molecular_function	GO:0005773|vacuole GO:0009507|chloroplast
pt2_04628	A	A2S	Potri.001G424400	Potri.001G424400(AS) Potri.011G137800(DS)	POPTR_0001s44900	sp|Q50EK1|C16B1_PICSI	Cytochrome P450 716B1 OS=Picea sitchensis GN=CYP716B1 PE=2 SV=1	AT5G36130.1	| Symbols: | Cytochrome P450 superfamily protein | chr5:14209293-14209811 REVERSE LENGTH=140	LOC_Os07g33480.4	protein|cytochrome P450 domain containing protein, expressed	IMGA|Medtr5g092150.1	Taxane 13-alpha-hydroxylase chr5 39206359-39203675 E EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005576|extracellular region
pt2_04629	C	C1S	Potri.001G424400	Potri.001G424400(CS)	sp|Q50EK1|C16B1_PICSI	Cytochrome P450 716B1 OS=Picea sitchensis GN=CYP716B1 PE=2 SV=1	AT5G36130.1	| Symbols: | Cytochrome P450 superfamily protein | chr5:14209293-14209811 REVERSE LENGTH=140	LOC_Os07g33480.4	protein|cytochrome P450 domain containing protein, expressed	IMGA|Medtr5g092150.1	Taxane 13-alpha-hydroxylase chr5 39206359-39203675 E EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005576|extracellular region
pt2_04630	A	A1S	Potri.001G424200	Potri.001G424200(AS)	POPTR_0001s44920	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04631	A	A1S	Potri.001G424100	Potri.001G424100(AS)	POPTR_0001s44930	sp|Q8W4T9|T13H_TAXCU	Taxane 13-alpha-hydroxylase OS=Taxus cuspidata GN=CYP725A2 PE=1 SV=1	NA	NA	LOC_Os07g30950.1	protein|hydroxylase, putative, expressed	IMGA|Medtr5g092150.1	Taxane 13-alpha-hydroxylase chr5 39206359-39203675 E EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005576|extracellular region
pt2_04632	B	B1S	Potri.001G424000	Potri.001G424000(BS)	POPTR_0001s44940	NA	NA	AT1G50740.1	| Symbols: | Transmembrane proteins 14C | chr1:18807861-18808765 FORWARD LENGTH=119	LOC_Os03g37090.1	protein|expressed protein	IMGA|Medtr5g092160.1	hypothetical protein chr5 39209386-39207145 F EGN_Mt100125 20111014	GO:0006612|protein targeting to membrane GO:0008150|biological_process GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010200|response to chitin GO:0010363|regulation of plant-type hypersensitive response GO:0030968|endoplasmic reticulum unfolded protein response GO:0050832|defense response to fungus	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_04633	A	A1S	Potri.001G423900	Potri.001G423900(AS)	POPTR_0001s44950	NA	NA	AT5G54880.1	| Symbols: | DTW domain-containing protein | chr5:22291920-22293104 FORWARD LENGTH=394	LOC_Os03g37100.1	protein|DTW domain containing protein, putative, expressed	IMGA|Medtr5g092280.1	Toll interleukin receptor chr5 39261425-39265469 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_04634	A	A1S	Potri.001G423800	Potri.001G423800(AS)	POPTR_0001s44960	sp|Q9FFU1|CAF2M_ARATH	CRS2-associated factor 2, mitochondrial OS=Arabidopsis thaliana GN=At5g54890 PE=2 SV=1	AT5G54890.1	| Symbols: | RNA-binding CRS1 / YhbY (CRM) domain-containing protein | chr5:22293346-22294909 FORWARD LENGTH=358	LOC_Os08g08860.1	protein|CRS2-associated factor 2, mitochondrial precursor, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003723|RNA binding	GO:0005739|mitochondrion
pt2_04635	A	A1S	Potri.001G423700	Potri.001G423700(AS)	POPTR_0001s44970	sp|Q9LJU7|PPA18_ARATH	Purple acid phosphatase 18 OS=Arabidopsis thaliana GN=PAP18 PE=2 SV=1	AT3G20500.1	| Symbols: ATPAP18, PAP18 | purple acid phosphatase 18 | chr3:7157926-7160244 FORWARD LENGTH=437	LOC_Os03g37130.1	protein|ATPAP18/PAP18, putative, expressed	IMGA|Medtr5g092360.1	Purple acid phosphatase chr5 39299066-39296046 E EGN_Mt100125 20111014	GO:0015824|proline transport	GO:0003993|acid phosphatase activity GO:0004722|protein serine/threonine phosphatase activity GO:0016787|hydrolase activity GO:0046872|metal ion binding	GO:0005576|extracellular region
pt2_04636	A	A1S	Potri.001G423600	Potri.001G423600(AS)	POPTR_0001s44980	sp|O60287|NPA1P_HUMAN	Nucleolar pre-ribosomal-associated protein 1 OS=Homo sapiens GN=URB1 PE=1 SV=4	AT4G27010.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Ribosome 60S biogenesis N-terminal (InterPro:IPR021714); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:13558943-13568296 FORWARD LENGTH=2374	LOC_Os04g53380.1	protein|expressed protein	NA	NA	GO:0006406|mRNA export from nucleus GO:0008150|biological_process GO:0009560|embryo sac egg cell differentiation GO:0009909|regulation of flower development GO:0010074|maintenance of meristem identity	NA	GO:0005634|nucleus
pt2_04637	A	A2S	Potri.001G423500	Potri.001G423500(AS) Potri.T066900(AS)	POPTR_0001s44990	sp|Q9XEX2|PRX2B_ARATH	Peroxiredoxin-2B OS=Arabidopsis thaliana GN=PRXIIB PE=1 SV=1	AT1G65980.1	| Symbols: TPX1 | thioredoxin-dependent peroxidase 1 | chr1:24559524-24560753 REVERSE LENGTH=162	LOC_Os01g48420.1	protein|peroxiredoxin, putative, expressed	NA	NA	GO:0009407|toxin catabolic process GO:0046686|response to cadmium ion	GO:0016209|antioxidant activity GO:0016491|oxidoreductase activity	GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane GO:0009507|chloroplast GO:0016020|membrane
pt2_04638	A	A2S	Potri.001G423400	Potri.001G423400(AS) Potri.T066800(AS)	POPTR_0001s45000	sp|Q93W34|RP45C_ARATH	Polyadenylate-binding protein RBP45C OS=Arabidopsis thaliana GN=RBP45C PE=2 SV=1	AT4G27000.1	| Symbols: ATRBP45C | RNA-binding (RRM/RBD/RNP motifs) family protein | chr4:13554983-13557763 REVERSE LENGTH=415	LOC_Os03g37270.1	protein|RNA recognition motif containing protein, putative, expressed	IMGA|Medtr1g019150.1	Polyadenylate-binding protein chr1 5864665-5869890 F EGN_Mt100125 20111014	GO:0000398|mRNA splicing, via spliceosome	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005829|cytosol
pt2_04639	A	A1S	Potri.001G423300	Potri.001G423300(AS)	POPTR_0001s45010	sp|Q9FFT9|RH32_ARATH	DEAD-box ATP-dependent RNA helicase 32 OS=Arabidopsis thaliana GN=RH32 PE=2 SV=1	AT5G54910.1	| Symbols: | DEA(D/H)-box RNA helicase family protein | chr5:22298668-22301719 REVERSE LENGTH=739	LOC_Os07g33340.1	protein|DEAD-box ATP-dependent RNA helicase, putative, expressed	IMGA|Medtr5g092560.1	ATP-dependent RNA helicase DBP4 chr5 39389139-39383328 E EGN_Mt100125 20111014	GO:0006606|protein import into nucleus	GO:0003676|nucleic acid binding GO:0004386|helicase activity GO:0005524|ATP binding GO:0008026|ATP-dependent helicase activity	GO:0005634|nucleus GO:0005730|nucleolus
pt2_04640	A	A3S	Potri.001G423200	Potri.001G423200(AS) Potri.T066600(AS) Potri.011G138600(DS)	POPTR_0001s45020	NA	NA	AT5G54920.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G26990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:22302111-22305576 FORWARD LENGTH=522	LOC_Os04g53450.1	protein|expressed protein	NA	NA	NA	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_04641	A	A2S	Potri.001G423000	Potri.001G423000(AS) Potri.T066500(AS)	POPTR_0001s45030	NA	NA	AT5G54930.2	| Symbols: | AT hook motif-containing protein | chr5:22305897-22306839 REVERSE LENGTH=283	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003677|DNA binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04642	A	A2S	Potri.T066500	Potri.T066500(AS) Potri.001G423000(BS)	POPTR_0001s45030	NA	NA	AT5G54930.2	| Symbols: | AT hook motif-containing protein | chr5:22305897-22306839 REVERSE LENGTH=283	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003677|DNA binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04643	A	A2S	Potri.001G423000	Potri.001G423000(AS) Potri.T066500(DS)	POPTR_0001s45030	NA	NA	AT5G54930.2	| Symbols: | AT hook motif-containing protein | chr5:22305897-22306839 REVERSE LENGTH=283	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003677|DNA binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04644	D	D14S	Potri.T066300	Potri.T066300(DS) Potri.001G427500(DS) Potri.001G427700(DS) Potri.001G429800(DS) Potri.001G429100(DS) Potri.001G425500(DS) Potri.T115300(DS) Potri.001G422800(DS) Potri.T100500(DS) Potri.001G422900(DS) Potri.001G428200(DS) Potri.001G432700(DS) Potri.T065900(DS) Potri.001G429500(DS)	POPTR_0001s45040	NA	NA	NA	NA	NA	NA	IMGA|Medtr1g044100.1	Cc-nbs resistance protein chr1 12820615-12813448 H EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0002831|regulation of response to biotic stimulus GO:0006612|protein targeting to membrane GO:0006952|defense response GO:0007165|signal transduction GO:0009416|response to light stimulus GO:0009595|detection of biotic stimulus GO:0009617|response to bacterium GO:0009626|plant-type hypersensitive response GO:0009697|salicylic acid biosynthetic process GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010114|response to red light GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0016045|detection of bacterium GO:0031347|regulation of defense response GO:0031348|negative regulation of defense response GO:0042742|defense response to bacterium GO:0043069|negative regulation of programmed cell death GO:0043900|regulation of multi-organism process GO:0045087|innate immune response GO:0050776|regulation of immune response GO:0050832|defense response to fungus GO:0051707|response to other organism	GO:0000166|nucleotide binding GO:0005515|protein binding GO:0017111|nucleoside-triphosphatase activity GO:0043531|ADP binding	GO:0005622|intracellular GO:0005737|cytoplasm GO:0005886|plasma membrane
pt2_04645	A	A6A	Potri.001G422900	Potri.001G422900(AA) Potri.001G429100(DA) Potri.T115300(DA) Potri.T100500(DA) Potri.001G433500(DA) Potri.T065900(DA)	POPTR_0001s45050	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04646	C	C15S	Potri.001G425300	Potri.001G425300(CS) Potri.001G427600(CS) Potri.001G426000(CS) Potri.001G427700(CS) Potri.001G422800(CS) Potri.001G429600(CS) Potri.001G426200(CS) Potri.001G427500(CS) Potri.001G425900(CS) Potri.001G429700(CS) Potri.001G425400(CS) Potri.T066300(CS) Potri.T065900(CS) Potri.001G426100(CS) Potri.001G427800(CS)	sp|Q9T048|DRL27_ARATH	Disease resistance protein At4g27190 OS=Arabidopsis thaliana GN=At4g27190 PE=2 SV=1	AT4G27190.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr4:13620977-13623934 REVERSE LENGTH=985	LOC_Os01g72680.1	protein|disease resistance protein RPS2, putative, expressed	IMGA|Medtr5g085400.1	Cc-nbs-lrr resistance protein chr5 35906400-35914135 H EGN_Mt100125 20111014	GO:0006952|defense response	GO:0000166|nucleotide binding GO:0017111|nucleoside-triphosphatase activity GO:0043531|ADP binding	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_04647	A	A2S	Potri.001G422800	Potri.001G422800(AS) Potri.T066300(DS)	POPTR_0001s45070	sp|Q9T048|DRL27_ARATH	Disease resistance protein At4g27190 OS=Arabidopsis thaliana GN=At4g27190 PE=2 SV=1	AT4G27190.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr4:13620977-13623934 REVERSE LENGTH=985	LOC_Os01g72680.1	protein|disease resistance protein RPS2, putative, expressed	IMGA|Medtr5g085400.1	Cc-nbs-lrr resistance protein chr5 35906400-35914135 H EGN_Mt100125 20111014	GO:0006952|defense response	GO:0000166|nucleotide binding GO:0017111|nucleoside-triphosphatase activity GO:0043531|ADP binding	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_04648	A	A1A	Potri.001G428800	Potri.001G428800(AA)	POPTR_0001s45080	NA	NA	NA	NA	NA	NA	IMGA|contig_87153_1.1	Cc-nbs-lrr resistance protein contig_87153 3267-440 I PREDN 20111014	GO:0000165|MAPK cascade GO:0002831|regulation of response to biotic stimulus GO:0006612|protein targeting to membrane GO:0006952|defense response GO:0009595|detection of biotic stimulus GO:0009617|response to bacterium GO:0009626|plant-type hypersensitive response GO:0009697|salicylic acid biosynthetic process GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0016045|detection of bacterium GO:0031347|regulation of defense response GO:0031348|negative regulation of defense response GO:0042742|defense response to bacterium GO:0043069|negative regulation of programmed cell death GO:0043900|regulation of multi-organism process GO:0045087|innate immune response GO:0050776|regulation of immune response GO:0050832|defense response to fungus GO:0051707|response to other organism	GO:0000166|nucleotide binding GO:0005515|protein binding GO:0017111|nucleoside-triphosphatase activity GO:0043531|ADP binding	GO:0005886|plasma membrane
pt2_04649	A	A2S	Potri.001G428900	Potri.001G428900(AS) Potri.001G434100(AA)	POPTR_0001s45090	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04650	B	B7S	Potri.001G434100	Potri.001G434100(BS) Potri.001G433300(BS) Potri.001G425400(BS) Potri.T065800(DS) Potri.001G434000(DS) Potri.001G433500(DS) Potri.001G426900(DS)	POPTR_0001s45100	NA	NA	NA	NA	NA	NA	IMGA|Medtr5g092190.1	Cc-nbs-lrr resistance protein chr5 39226547-39217532 E EGN_Mt100125 20111014	NA	NA	NA
pt2_04651	A	A2S	Potri.001G445800	Potri.001G445800(AS) Potri.001G446700(BS)	POPTR_0001s45120	NA	NA	NA	NA	NA	NA	IMGA|Medtr5g092190.1	Cc-nbs-lrr resistance protein chr5 39226547-39217532 E EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0006952|defense response	GO:0043531|ADP binding	GO:0005634|nucleus
pt2_04652	A	A1S	Potri.001G445700	Potri.001G445700(AS)	POPTR_0001s45130	sp|Q9T048|DRL27_ARATH	Disease resistance protein At4g27190 OS=Arabidopsis thaliana GN=At4g27190 PE=2 SV=1	AT4G27190.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr4:13620977-13623934 REVERSE LENGTH=985	LOC_Os01g72680.1	protein|disease resistance protein RPS2, putative, expressed	IMGA|Medtr1g041550.1	Cc-nbs resistance protein chr1 11650158-11644067 E EGN_Mt100125 20111014	GO:0006952|defense response	GO:0000166|nucleotide binding GO:0017111|nucleoside-triphosphatase activity GO:0043531|ADP binding	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_04653	B	B3S	Potri.T087900	Potri.T087900(BS) Potri.001G444100(DS) Potri.001G444000(DS)	POPTR_0001s45140	sp|Q9T048|DRL27_ARATH	Disease resistance protein At4g27190 OS=Arabidopsis thaliana GN=At4g27190 PE=2 SV=1	AT4G27190.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr4:13620977-13623934 REVERSE LENGTH=985	LOC_Os11g29090.1	protein|NB-ARC/LRR disease resistance protein, putative, expressed	IMGA|Medtr5g036460.1	Disease resistance protein chr5 15473284-15460284 H EGN_Mt100125 20111014	GO:0006952|defense response	GO:0000166|nucleotide binding GO:0017111|nucleoside-triphosphatase activity GO:0043531|ADP binding	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_04654	A	A4S	Potri.001G447300	Potri.001G447300(AS) Potri.001G447400(BS) Potri.001G447500(BS) Potri.001G447700(BS)	POPTR_0001s45150	sp|Q8GT20|BEBT_TOBAC	Benzyl alcohol O-benzoyltransferase OS=Nicotiana tabacum GN=HSR201 PE=1 SV=1	AT5G17540.1	| Symbols: | HXXXD-type acyl-transferase family protein | chr5:5782061-5783682 REVERSE LENGTH=461	LOC_Os10g35950.1	protein|transferase family protein, putative, expressed	IMGA|Medtr5g076700.1	Benzoyl coenzyme A benzyl alcohol benzoyl transferase chr5 31729976-31732699 H EGN_Mt100125 20111014	NA	GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_04655	A	A4S	Potri.001G447400	Potri.001G447400(AS) Potri.001G447500(AS) Potri.001G447800(BS) Potri.001G447700(BS)	POPTR_0001s45160	sp|Q8GT20|BEBT_TOBAC	Benzyl alcohol O-benzoyltransferase OS=Nicotiana tabacum GN=HSR201 PE=1 SV=1	AT5G17540.1	| Symbols: | HXXXD-type acyl-transferase family protein | chr5:5782061-5783682 REVERSE LENGTH=461	LOC_Os10g35950.1	protein|transferase family protein, putative, expressed	IMGA|Medtr5g076700.1	Benzoyl coenzyme A benzyl alcohol benzoyl transferase chr5 31729976-31732699 H EGN_Mt100125 20111014	NA	GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_04656	B	B2S	Potri.001G447600	Potri.001G447600(BS) Potri.017G024700(BS)	POPTR_0001s45170	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04657	A	A5S	Potri.001G447700	Potri.001G447700(AS) Potri.001G447800(BS) Potri.001G447400(BS) Potri.001G447500(BS) Potri.001G447300(DS)	POPTR_0001s45180	sp|Q8GT20|BEBT_TOBAC	Benzyl alcohol O-benzoyltransferase OS=Nicotiana tabacum GN=HSR201 PE=1 SV=1	AT5G17540.1	| Symbols: | HXXXD-type acyl-transferase family protein | chr5:5782061-5783682 REVERSE LENGTH=461	LOC_Os10g35950.1	protein|transferase family protein, putative, expressed	IMGA|Medtr5g076700.1	Benzoyl coenzyme A benzyl alcohol benzoyl transferase chr5 31729976-31732699 H EGN_Mt100125 20111014	NA	GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_04658	A	A5S	Potri.001G447800	Potri.001G447800(AS) Potri.001G447400(BS) Potri.001G447500(BS) Potri.001G447700(BS) Potri.001G447300(DS)	POPTR_0001s45190	sp|Q8GT20|BEBT_TOBAC	Benzyl alcohol O-benzoyltransferase OS=Nicotiana tabacum GN=HSR201 PE=1 SV=1	AT5G17540.1	| Symbols: | HXXXD-type acyl-transferase family protein | chr5:5782061-5783682 REVERSE LENGTH=461	LOC_Os06g49660.1	protein|transferase family protein, putative, expressed	IMGA|Medtr5g076700.1	Benzoyl coenzyme A benzyl alcohol benzoyl transferase chr5 31729976-31732699 H EGN_Mt100125 20111014	NA	GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_04659	A	A7S	Potri.001G447800	Potri.001G447800(AS) Potri.011G153500(DS) Potri.001G447300(DS) Potri.001G447400(DS) Potri.001G447500(DS) Potri.001G447700(DS) Potri.001G447900(DS)	POPTR_0001s45190	sp|Q8GT20|BEBT_TOBAC	Benzyl alcohol O-benzoyltransferase OS=Nicotiana tabacum GN=HSR201 PE=1 SV=1	AT5G17540.1	| Symbols: | HXXXD-type acyl-transferase family protein | chr5:5782061-5783682 REVERSE LENGTH=461	LOC_Os06g49660.1	protein|transferase family protein, putative, expressed	IMGA|Medtr5g076700.1	Benzoyl coenzyme A benzyl alcohol benzoyl transferase chr5 31729976-31732699 H EGN_Mt100125 20111014	NA	GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_04660	A	A6S	Potri.001G447700	Potri.001G447700(AS) Potri.001G447900(AS) Potri.001G447800(BS) Potri.001G447400(BS) Potri.001G447500(BS) Potri.001G447300(DS)	POPTR_0001s45200	sp|Q8GT20|BEBT_TOBAC	Benzyl alcohol O-benzoyltransferase OS=Nicotiana tabacum GN=HSR201 PE=1 SV=1	AT5G17540.1	| Symbols: | HXXXD-type acyl-transferase family protein | chr5:5782061-5783682 REVERSE LENGTH=461	LOC_Os10g35950.1	protein|transferase family protein, putative, expressed	IMGA|Medtr5g076700.1	Benzoyl coenzyme A benzyl alcohol benzoyl transferase chr5 31729976-31732699 H EGN_Mt100125 20111014	NA	GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_04661	A	A1S	Potri.001G448000	Potri.001G448000(AS)	POPTR_0001s45210	sp|Q8GT20|BEBT_TOBAC	Benzyl alcohol O-benzoyltransferase OS=Nicotiana tabacum GN=HSR201 PE=1 SV=1	AT5G17540.1	| Symbols: | HXXXD-type acyl-transferase family protein | chr5:5782061-5783682 REVERSE LENGTH=461	LOC_Os10g35950.1	protein|transferase family protein, putative, expressed	IMGA|Medtr5g076700.1	Benzoyl coenzyme A benzyl alcohol benzoyl transferase chr5 31729976-31732699 H EGN_Mt100125 20111014	NA	GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_04662	A	A1S	Potri.001G448100	Potri.001G448100(AS)	POPTR_0001s45220	NA	NA	AT1G01110.2	| Symbols: IQD18 | IQ-domain 18 | chr1:52239-54494 FORWARD LENGTH=527	LOC_Os08g02250.1	protein|IQ calmodulin-binding motif domain containing protein, expressed	IMGA|Medtr1g095740.1	IQ domain-containing protein chr1 27488331-27490594 H EGN_Mt100125 20111014	NA	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_04663	A	A1S	Potri.001G448200	Potri.001G448200(AS)	POPTR_0001s45230	NA	NA	NA	NA	NA	NA	NA	NA	GO:0009793|embryo development ending in seed dormancy GO:0045036|protein targeting to chloroplast	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009941|chloroplast envelope
pt2_04664	A	A1S	Potri.001G448300	Potri.001G448300(AS)	POPTR_0001s45240	sp|Q9FLE8|Y5986_ARATH	Uncharacterized protein At5g39865 OS=Arabidopsis thaliana GN=At5g39865 PE=1 SV=1	AT4G10630.1	| Symbols: | Glutaredoxin family protein | chr4:6566625-6567629 REVERSE LENGTH=334	LOC_Os02g01200.1	protein|glutaredoxin, putative, expressed	IMGA|Medtr1g090400.1	Glutaredoxin domain-containing cysteine-rich protein chr1 24959357-24960466 H EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0045454|cell redox homeostasis	GO:0009055|electron carrier activity GO:0015035|protein disulfide oxidoreductase activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04665	A	A2S	Potri.001G448400	Potri.001G448400(AS) Potri.011G153300(DS)	POPTR_0001s45250	sp|Q9LPI7|NAC12_ARATH	NAC domain-containing protein 12 OS=Arabidopsis thaliana GN=NAC012 PE=2 SV=1	AT1G32770.1	| Symbols: ANAC012, SND1, NST3, NAC012 | NAC domain containing protein 12 | chr1:11865343-11866950 REVERSE LENGTH=358	LOC_Os08g02300.1	protein|no apical meristem protein, putative, expressed	IMGA|Medtr5g021710.1	NAC domain protein chr5 8192612-8195394 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0007275|multicellular organismal development GO:0009793|embryo development ending in seed dormancy GO:0009809|lignin biosynthetic process GO:0009901|anther dehiscence GO:0010047|fruit dehiscence GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04666	A	A1S	Potri.001G448500	Potri.001G448500(AS)	POPTR_0001s45260	NA	NA	AT1G64700.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G61920.1); Has 48 Blast hits to 47 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:24039931-24040542 REVERSE LENGTH=203	NA	NA	NA	NA	GO:0006499|N-terminal protein myristoylation	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04667	A	A1S	Potri.001G448600	Potri.001G448600(AS)	POPTR_0001s45270	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04668	A	A1S	Potri.001G448700	Potri.001G448700(AS)	POPTR_0001s45280	sp|A1L4Y2|ADHL3_ARATH	Alcohol dehydrogenase-like 3 OS=Arabidopsis thaliana GN=At1g32780 PE=2 SV=1	AT1G32780.1	| Symbols: | GroES-like zinc-binding dehydrogenase family protein | chr1:11869977-11872595 REVERSE LENGTH=394	LOC_Os10g07229.1	protein|dehydrogenase, putative, expressed	IMGA|Medtr5g087710.1	Alcohol dehydrogenase-like protein chr5 37019082-37015790 E EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0008270|zinc ion binding GO:0016491|oxidoreductase activity	GO:0005737|cytoplasm
pt2_04669	G	G1	NA	NA	POPTR_0001s45290	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04670	A	A1S	Potri.001G448900	Potri.001G448900(AS)	POPTR_0001s45300	NA	NA	AT4G10600.1	| Symbols: | RING/FYVE/PHD zinc finger superfamily protein | chr4:6547934-6548647 REVERSE LENGTH=237	LOC_Os04g14510.2	protein|expressed protein	NA	NA	GO:0006396|RNA processing GO:0009410|response to xenobiotic stimulus GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process GO:0048522|positive regulation of cellular process	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_04671	A	A2S	Potri.001G449000	Potri.001G449000(AS) Potri.011G152500(DS)	POPTR_0001s45310	sp|Q9ZSB5|UBP10_ARATH	Ubiquitin carboxyl-terminal hydrolase 10 OS=Arabidopsis thaliana GN=UBP10 PE=2 SV=2	AT4G10570.1	| Symbols: UBP9 | ubiquitin-specific protease 9 | chr4:6523657-6528058 REVERSE LENGTH=923	LOC_Os10g07270.1	protein|ubiquitin carboxyl-terminal hydrolase 5, putative, expressed	IMGA|Medtr5g030360.2	Ubiquitin carboxyl-terminal hydrolase chr5 12508488-12504846 E EGN_Mt100125 20111014	GO:0006511|ubiquitin-dependent protein catabolic process	GO:0004197|cysteine-type endopeptidase activity GO:0004221|ubiquitin thiolesterase activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04672	A	A2S	Potri.001G449100	Potri.001G449100(AS) Potri.011G152400(DS)	POPTR_0001s45320	sp|Q8L868|E1311_ARATH	Glucan endo-1,3-beta-glucosidase 11 OS=Arabidopsis thaliana GN=At1g32860 PE=1 SV=1	AT1G32860.1	| Symbols: | Glycosyl hydrolase superfamily protein | chr1:11907308-11908803 REVERSE LENGTH=426	LOC_Os01g64170.2	protein|glycosyl hydrolases family 17, putative, expressed	IMGA|Medtr5g085580.1	"Glucan endo-1,3-beta-glucosidase" chr5 35975309-35973056 F EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0043169|cation binding	GO:0005576|extracellular region GO:0005886|plasma membrane GO:0031225|anchored to membrane GO:0046658|anchored to plasma membrane
pt2_04673	A	A2S	Potri.001G449200	Potri.001G449200(AS) Potri.003G113200(BS)	POPTR_0001s45330	sp|O24047|MDHC_MESCR	Malate dehydrogenase, cytoplasmic OS=Mesembryanthemum crystallinum GN=MDH PE=2 SV=1	AT5G56720.1	| Symbols: | Lactate/malate dehydrogenase family protein | chr5:22945537-22946718 FORWARD LENGTH=339	LOC_Os10g33800.1	protein|lactate/malate dehydrogenase, putative, expressed	IMGA|Medtr1g043040.1	Malate dehydrogenase chr1 12398443-12393400 F EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0006108|malate metabolic process GO:0044262|cellular carbohydrate metabolic process GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0016491|oxidoreductase activity GO:0016615|malate dehydrogenase activity GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0030060|L-malate dehydrogenase activity	GO:0005737|cytoplasm GO:0016020|membrane
pt2_04674	C	C1S	Potri.001G449300	Potri.001G449300(CS)	sp|A2YU42|CSLD2_ORYSI	Cellulose synthase-like protein D2 OS=Oryza sativa subsp. indica GN=CSLD2 PE=3 SV=1	AT3G03050.1	| Symbols: CSLD3, KJK, ATCSLD3 | cellulose synthase-like D3 | chr3:687873-691629 FORWARD LENGTH=1145	LOC_Os06g02180.1	protein|CSLD2 - cellulose synthase-like family D, expressed	IMGA|Medtr5g029190.1	Cellulose synthase-like protein chr5 11949044-11944517 E EGN_Mt100125 20111014	GO:0000271|polysaccharide biosynthetic process GO:0009409|response to cold GO:0010583|response to cyclopentenone GO:0030244|cellulose biosynthetic process	GO:0016757|transferase activity, transferring glycosyl groups GO:0016759|cellulose synthase activity GO:0016760|cellulose synthase (UDP-forming) activity GO:0051753|mannan synthase activity	GO:0005768|endosome GO:0005783|endoplasmic reticulum GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0005886|plasma membrane GO:0016020|membrane
pt2_04675	A	A2S	Potri.001G449400	Potri.001G449400(AS) Potri.001G449500(AA)	POPTR_0001s45350	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04676	A	A2S	Potri.001G449500	Potri.001G449500(AS) Potri.001G449400(AA)	POPTR_0001s45360	sp|Q43784|SSG1_MANES	Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Manihot esculenta GN=WAXY PE=2 SV=1	AT1G32900.1	| Symbols: | UDP-Glycosyltransferase superfamily protein | chr1:11920582-11923506 REVERSE LENGTH=610	LOC_Os07g22930.2	protein|starch synthase, putative, expressed	NA	NA	GO:0001666|response to hypoxia GO:0009058|biosynthetic process GO:0009250|glucan biosynthetic process GO:0010264|myo-inositol hexakisphosphate biosynthetic process GO:0019375|galactolipid biosynthetic process	GO:0005515|protein binding GO:0009011|starch synthase activity GO:0016757|transferase activity, transferring glycosyl groups	GO:0009507|chloroplast
pt2_04677	A	A1S	Potri.001G449500	Potri.001G449500(AS)	POPTR_0001s45360	sp|Q43784|SSG1_MANES	Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Manihot esculenta GN=WAXY PE=2 SV=1	AT1G32900.1	| Symbols: | UDP-Glycosyltransferase superfamily protein | chr1:11920582-11923506 REVERSE LENGTH=610	LOC_Os07g22930.2	protein|starch synthase, putative, expressed	NA	NA	GO:0001666|response to hypoxia GO:0009058|biosynthetic process GO:0009250|glucan biosynthetic process GO:0010264|myo-inositol hexakisphosphate biosynthetic process GO:0019375|galactolipid biosynthetic process	GO:0005515|protein binding GO:0009011|starch synthase activity GO:0016757|transferase activity, transferring glycosyl groups	GO:0009507|chloroplast
pt2_04678	A	A2S	Potri.001G449500	Potri.001G449500(AS) Potri.011G152200(BS)	POPTR_0001s45360	sp|Q43784|SSG1_MANES	Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Manihot esculenta GN=WAXY PE=2 SV=1	AT1G32900.1	| Symbols: | UDP-Glycosyltransferase superfamily protein | chr1:11920582-11923506 REVERSE LENGTH=610	LOC_Os07g22930.2	protein|starch synthase, putative, expressed	NA	NA	GO:0001666|response to hypoxia GO:0009058|biosynthetic process GO:0009250|glucan biosynthetic process GO:0010264|myo-inositol hexakisphosphate biosynthetic process GO:0019375|galactolipid biosynthetic process	GO:0005515|protein binding GO:0009011|starch synthase activity GO:0016757|transferase activity, transferring glycosyl groups	GO:0009507|chloroplast
pt2_04679	A	A2S	Potri.001G449500	Potri.001G449500(AS) Potri.001G449400(AA)	POPTR_0001s45360	sp|Q43784|SSG1_MANES	Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Manihot esculenta GN=WAXY PE=2 SV=1	AT1G32900.1	| Symbols: | UDP-Glycosyltransferase superfamily protein | chr1:11920582-11923506 REVERSE LENGTH=610	LOC_Os07g22930.2	protein|starch synthase, putative, expressed	NA	NA	GO:0001666|response to hypoxia GO:0009058|biosynthetic process GO:0009250|glucan biosynthetic process GO:0010264|myo-inositol hexakisphosphate biosynthetic process GO:0019375|galactolipid biosynthetic process	GO:0005515|protein binding GO:0009011|starch synthase activity GO:0016757|transferase activity, transferring glycosyl groups	GO:0009507|chloroplast
pt2_04680	B	B2S	Potri.001G449500	Potri.001G449500(BS) Potri.001G449400(BA)	POPTR_0001s45360	sp|Q43784|SSG1_MANES	Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Manihot esculenta GN=WAXY PE=2 SV=1	AT1G32900.1	| Symbols: | UDP-Glycosyltransferase superfamily protein | chr1:11920582-11923506 REVERSE LENGTH=610	LOC_Os07g22930.2	protein|starch synthase, putative, expressed	NA	NA	GO:0001666|response to hypoxia GO:0009058|biosynthetic process GO:0009250|glucan biosynthetic process GO:0010264|myo-inositol hexakisphosphate biosynthetic process GO:0019375|galactolipid biosynthetic process	GO:0005515|protein binding GO:0009011|starch synthase activity GO:0016757|transferase activity, transferring glycosyl groups	GO:0009507|chloroplast
pt2_04681	A	A1S	Potri.001G449600	Potri.001G449600(AS)	POPTR_0001s45370	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_04682	A	A1S	Potri.001G449700	Potri.001G449700(AS)	POPTR_0001s45380	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04683	A	A2S	Potri.001G449900	Potri.001G449900(AS) Potri.001G449800(AS)	POPTR_0001s45390	NA	NA	AT1G32928.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G32920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr1:11931332-11931586 FORWARD LENGTH=84	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_04684	B	B3S	Potri.001G449900	Potri.001G449900(BS) Potri.001G449800(BS) Potri.001G450000(BS)	POPTR_0001s45400	NA	NA	AT1G32928.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G32920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr1:11931332-11931586 FORWARD LENGTH=84	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_04685	A	A1S	Potri.001G450100	Potri.001G450100(AS)	POPTR_0001s45410	sp|Q9NQZ5|STAR7_HUMAN	StAR-related lipid transfer protein 7, mitochondrial OS=Homo sapiens GN=STARD7 PE=1 SV=2	AT1G64720.1	| Symbols: CP5 | Polyketide cyclase/dehydrase and lipid transport superfamily protein | chr1:24046887-24048537 REVERSE LENGTH=385	LOC_Os02g03230.1	protein|membrane related protein CP5, putative, expressed	IMGA|Medtr5g007030.1	Membrane related protein-like protein chr5 936816-941960 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0005773|vacuole
pt2_04686	A	A1S	Potri.001G450200	Potri.001G450200(AS)	POPTR_0001s45420	sp|Q9MAP8|B3GT6_ARATH	Probable beta-1,3-galactosyltransferase 6 OS=Arabidopsis thaliana GN=B3GALT6 PE=2 SV=1	AT1G32930.1	| Symbols: | Galactosyltransferase family protein | chr1:11931980-11934399 REVERSE LENGTH=399	LOC_Os03g38050.1	protein|galactosyltransferase, putative, expressed	IMGA|Medtr5g009700.1	Beta 1 3-glycosyltransferase-like protein I chr5 2172538-2165300 H EGN_Mt100125 20111014	GO:0006346|methylation-dependent chromatin silencing GO:0006486|protein glycosylation GO:0031048|chromatin silencing by small RNA GO:0051567|histone H3-K9 methylation	GO:0008378|galactosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups	GO:0005794|Golgi apparatus GO:0016020|membrane
pt2_04687	C	C1S	Potri.001G450300	Potri.001G450300(CS)	NA	NA	AT5G14230.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 ortholog 2 in Arabidopsis thaliana (TAIR:AT5G57740.1); Has 66374 Blast hits to 25358 proteins in 1201 species: Archae - 121; Bacteria - 8133; Metazoa - 29530; Fungi - 5885; Plants - 3349; Viruses - 785; Other Eukaryotes - 18571 (source: NCBI BLink). | chr5:4591883-4595775 FORWARD LENGTH=751	LOC_Os02g25960.1	protein|ankyrin repeat family protein, putative, expressed	NA	NA	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_04688	C	C1S	Potri.001G450300	Potri.001G450300(CS)	NA	NA	AT5G14230.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 ortholog 2 in Arabidopsis thaliana (TAIR:AT5G57740.1); Has 66374 Blast hits to 25358 proteins in 1201 species: Archae - 121; Bacteria - 8133; Metazoa - 29530; Fungi - 5885; Plants - 3349; Viruses - 785; Other Eukaryotes - 18571 (source: NCBI BLink). | chr5:4591883-4595775 FORWARD LENGTH=751	LOC_Os02g25960.1	protein|ankyrin repeat family protein, putative, expressed	NA	NA	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_04689	A	A1S	Potri.001G450400	Potri.001G450400(AS)	POPTR_0001s45450	sp|O65351|SUBL_ARATH	Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1	AT4G10520.1	| Symbols: | Subtilase family protein | chr4:6499794-6502866 FORWARD LENGTH=756	LOC_Os09g36110.1	protein|OsSub59 - Putative Subtilisin homologue, expressed	IMGA|Medtr5g025010.1	Subtilisin-like protease chr5 9863093-9866617 E EGN_Mt100125 20111014	GO:0006508|proteolysis GO:0008152|metabolic process GO:0043086|negative regulation of catalytic activity	GO:0004252|serine-type endopeptidase activity GO:0042802|identical protein binding	GO:0005576|extracellular region GO:0005618|cell wall
pt2_04690	D	D2S	Potri.011G151100	Potri.011G151100(DS) Potri.001G450500(DS)	POPTR_0001s45460	sp|O65351|SUBL_ARATH	Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1	AT4G10550.1	| Symbols: | Subtilase family protein | chr4:6516613-6519767 REVERSE LENGTH=778	LOC_Os02g17090.1	protein|OsSub17 - Putative Subtilisin homologue, expressed	IMGA|Medtr5g025010.1	Subtilisin-like protease chr5 9863093-9866617 E EGN_Mt100125 20111014	GO:0006508|proteolysis GO:0008152|metabolic process GO:0043086|negative regulation of catalytic activity	GO:0004252|serine-type endopeptidase activity GO:0042802|identical protein binding	GO:0005576|extracellular region GO:0009505|plant-type cell wall
pt2_04691	R	R	NA	NA	POPTR_0001s45470	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04692	R	R	NA	NA	POPTR_0001s45480	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04693	A	A1S	Potri.001G450600	Potri.001G450600(AS)	POPTR_0001s45490	sp|O65351|SUBL_ARATH	Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1	AT1G32960.1	| Symbols: ATSBT3.3, SBT3.3 | Subtilase family protein | chr1:11945351-11948429 FORWARD LENGTH=777	LOC_Os09g36110.1	protein|OsSub59 - Putative Subtilisin homologue, expressed	IMGA|Medtr5g025010.1	Subtilisin-like protease chr5 9863093-9866617 E EGN_Mt100125 20111014	GO:0006508|proteolysis GO:0008152|metabolic process GO:0009581|detection of external stimulus GO:0009595|detection of biotic stimulus GO:0043086|negative regulation of catalytic activity	GO:0004252|serine-type endopeptidase activity GO:0042802|identical protein binding	GO:0005576|extracellular region GO:0009505|plant-type cell wall GO:0048046|apoplast
pt2_04694	A	A1S	Potri.001G450700	Potri.001G450700(AS)	POPTR_0001s45500	NA	NA	AT3G61460.1	| Symbols: BRH1 | brassinosteroid-responsive RING-H2 | chr3:22741701-22742213 REVERSE LENGTH=170	LOC_Os04g49160.1	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr5g010100.1	RING zinc finger protein-like protein chr5 2395799-2396606 F EGN_Mt100125 20111014	GO:0009741|response to brassinosteroid stimulus GO:0010200|response to chitin GO:0030003|cellular cation homeostasis GO:0070838|divalent metal ion transport	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_04695	A	A1S	Potri.001G450800	Potri.001G450800(AS)	POPTR_0001s45510	sp|Q9MAP3|RK11_ARATH	50S ribosomal protein L11, chloroplastic OS=Arabidopsis thaliana GN=RPL11 PE=1 SV=1	AT1G32990.1	| Symbols: PRPL11 | plastid ribosomal protein l11 | chr1:11955827-11957139 FORWARD LENGTH=222	LOC_Os03g03020.1	protein|L11 domain containing ribosomal protein, putative, expressed	NA	NA	GO:0006364|rRNA processing GO:0006412|translation GO:0010027|thylakoid membrane organization GO:0015995|chlorophyll biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway	GO:0003735|structural constituent of ribosome	GO:0005840|ribosome GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope GO:0016020|membrane GO:0022625|cytosolic large ribosomal subunit GO:0022626|cytosolic ribosome
pt2_04696	A	A1S	Potri.001G450900	Potri.001G450900(AS)	POPTR_0001s45520	sp|Q9ZT63|MTP1_ARATH	Metal tolerance protein 1 OS=Arabidopsis thaliana GN=MTP1 PE=1 SV=2	AT2G46800.2	| Symbols: ZAT, ATMTP1, MTP1, ZAT1, ATCDF1 | zinc transporter of Arabidopsis thaliana | chr2:19238128-19239324 FORWARD LENGTH=398	LOC_Os05g03780.1	protein|cation efflux family protein, putative, expressed	IMGA|AC229724_1040.1	Zinc ion transmembrane transporter AC229724.12 138846-135050 E EGN_Mt100125 20111014	GO:0006812|cation transport GO:0006829|zinc ion transport GO:0006882|cellular zinc ion homeostasis GO:0009062|fatty acid catabolic process GO:0010038|response to metal ion GO:0055085|transmembrane transport	GO:0005385|zinc ion transmembrane transporter activity GO:0008324|cation transmembrane transporter activity GO:0015103|inorganic anion transmembrane transporter activity GO:0046873|metal ion transmembrane transporter activity	GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0016021|integral to membrane
pt2_04697	A	A1S	Potri.001G451100	Potri.001G451100(AS)	POPTR_0001s45530	sp|Q00763|COMT1_POPTM	Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1	AT5G54160.1	| Symbols: ATOMT1, OMT1 | O-methyltransferase 1 | chr5:21982075-21984167 FORWARD LENGTH=363	LOC_Os08g06100.1	protein|O-methyltransferase, putative, expressed	IMGA|Medtr5g098170.1	Caffeic acid 3-O-methyltransferase chr5 41960364-41963829 F EGN_Mt100125 20111014	GO:0006598|polyamine catabolic process GO:0009611|response to wounding GO:0009698|phenylpropanoid metabolic process GO:0009805|coumarin biosynthetic process GO:0009809|lignin biosynthetic process GO:0009963|positive regulation of flavonoid biosynthetic process GO:0016126|sterol biosynthetic process GO:0042398|cellular modified amino acid biosynthetic process GO:0051555|flavonol biosynthetic process	GO:0030744|luteolin O-methyltransferase activity GO:0030755|quercetin 3-O-methyltransferase activity GO:0033799|myricetin 3'-O-methyltransferase activity GO:0047763|caffeate O-methyltransferase activity	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_04698	A	A1S	Potri.001G451200	Potri.001G451200(AS)	POPTR_0001s45540	NA	NA	AT4G10500.1	| Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr4:6491089-6492342 FORWARD LENGTH=349	LOC_Os04g49210.1	protein|naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed	NA	NA	GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process GO:0019748|secondary metabolic process GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	NA
pt2_04699	A	A1S	Potri.001G451300	Potri.001G451300(AS)	POPTR_0001s45550	sp|Q96330|FLS1_ARATH	Flavonol synthase/flavanone 3-hydroxylase OS=Arabidopsis thaliana GN=FLS1 PE=1 SV=1	AT4G10500.1	| Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr4:6491089-6492342 FORWARD LENGTH=349	LOC_Os04g49210.1	protein|naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed	IMGA|Medtr5g065010.1	Gibberellin 3-beta-dioxygenase chr5 26345931-26349139 F EGN_Mt100125 20111014	GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process GO:0019748|secondary metabolic process GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	NA
pt2_04700	A	A5S	Potri.001G451400	Potri.001G451400(AS) Potri.001G462100(BS) Potri.001G461800(BS) Potri.001G461500(BS) Potri.001G462000(BS)	POPTR_0001s45560	sp|P30986|RETO_ESCCA	Reticuline oxidase OS=Eschscholzia californica GN=BBE1 PE=1 SV=1	AT5G44400.1	| Symbols: | FAD-binding Berberine family protein | chr5:17886365-17888071 REVERSE LENGTH=537	LOC_Os08g06170.1	protein|berberine and berberine like domain containing protein, expressed	IMGA|contig_77107_1.1	(S)-reticuline oxidase-like protein contig_77107 1833-1018 H PREDN 20111014	GO:0006865|amino acid transport GO:0055114|oxidation-reduction process	GO:0003824|catalytic activity GO:0008762|UDP-N-acetylmuramate dehydrogenase activity GO:0009055|electron carrier activity GO:0016491|oxidoreductase activity GO:0016614|oxidoreductase activity, acting on CH-OH group of donors GO:0050660|flavin adenine dinucleotide binding	GO:0005737|cytoplasm
pt2_04701	A	A1S	Potri.001G451500	Potri.001G451500(AS)	POPTR_0001s45570	sp|O04847|DV4H_CATRO	Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2	AT4G10500.1	| Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr4:6491089-6492342 FORWARD LENGTH=349	LOC_Os04g49210.1	protein|naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed	IMGA|Medtr5g065010.1	Gibberellin 3-beta-dioxygenase chr5 26345931-26349139 F EGN_Mt100125 20111014	GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process GO:0019748|secondary metabolic process GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	NA
pt2_04702	A	A1S	Potri.001G451600	Potri.001G451600(AS)	POPTR_0001s45580	sp|Q05963|FL3H_CALCH	Naringenin,2-oxoglutarate 3-dioxygenase OS=Callistephus chinensis GN=FHT PE=2 SV=1	AT4G10500.1	| Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr4:6491089-6492342 FORWARD LENGTH=349	LOC_Os04g49210.1	protein|naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed	IMGA|Medtr5g032870.1	1-aminocyclopropane-1-carboxylate oxidase chr5 13746625-13744119 F EGN_Mt100125 20111014	GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process GO:0019748|secondary metabolic process GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	NA
pt2_04703	A	A2S	Potri.001G451700	Potri.001G451700(AS) Potri.001G451800(AS)	POPTR_0001s45600	sp|Q9ZWQ9|FLS_CITUN	Flavonol synthase/flavanone 3-hydroxylase OS=Citrus unshiu GN=FLS PE=1 SV=1	AT4G10500.1	| Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr4:6491089-6492342 FORWARD LENGTH=349	LOC_Os04g49210.1	protein|naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed	IMGA|Medtr5g065010.1	Gibberellin 3-beta-dioxygenase chr5 26345931-26349139 F EGN_Mt100125 20111014	GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process GO:0019748|secondary metabolic process GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	NA
pt2_04704	A	A1S	Potri.001G451900	Potri.001G451900(AS)	POPTR_0001s45610	sp|P24397|HY6H_HYONI	Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H6H PE=1 SV=1	AT4G10490.1	| Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr4:6483900-6485179 FORWARD LENGTH=348	LOC_Os04g49210.1	protein|naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed	IMGA|Medtr5g032870.1	1-aminocyclopropane-1-carboxylate oxidase chr5 13746625-13744119 F EGN_Mt100125 20111014	GO:0019748|secondary metabolic process GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_04705	C	C2S	Potri.001G420000	Potri.001G420000(CS) Potri.018G048800(CS)	sp|Q9T048|DRL27_ARATH	Disease resistance protein At4g27190 OS=Arabidopsis thaliana GN=At4g27190 PE=2 SV=1	AT4G27190.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr4:13620977-13623934 REVERSE LENGTH=985	LOC_Os01g72680.1	protein|disease resistance protein RPS2, putative, expressed	IMGA|Medtr1g044100.1	Cc-nbs resistance protein chr1 12820615-12813448 H EGN_Mt100125 20111014	GO:0006952|defense response	GO:0000166|nucleotide binding GO:0017111|nucleoside-triphosphatase activity GO:0043531|ADP binding	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_04706	A	A1S	Potri.001G452000	Potri.001G452000(AS)	POPTR_0001s45630	sp|Q9SIH5|FB322_ARATH	Probable F-box protein At1g60180 OS=Arabidopsis thaliana GN=At2g36090 PE=2 SV=1	AT2G36090.1	| Symbols: | F-box family protein | chr2:15158631-15159584 FORWARD LENGTH=317	LOC_Os02g33240.1	protein|OsFBX51 - F-box domain containing protein, expressed	IMGA|contig_239060_1.1	F-box family protein contig_239060 494-3039 H PREDN 20111014	GO:0008150|biological_process	NA	NA
pt2_04707	A	A2S	Potri.001G452100	Potri.001G452100(AS) Potri.011G149800(DS)	POPTR_0001s45640	sp|Q9XGY5|TIM13_ORYSJ	Mitochondrial import inner membrane translocase subunit Tim13 OS=Oryza sativa subsp. japonica GN=TIM13 PE=3 SV=2	AT1G61570.1	| Symbols: TIM13 | translocase of the inner mitochondrial membrane 13 | chr1:22718897-22719473 REVERSE LENGTH=87	LOC_Os02g45820.1	protein|mitochondrial import inner membrane translocase subunit Tim, putative, expressed	NA	NA	GO:0001510|RNA methylation GO:0006626|protein targeting to mitochondrion GO:0045039|protein import into mitochondrial inner membrane	GO:0005507|copper ion binding GO:0015450|P-P-bond-hydrolysis-driven protein transmembrane transporter activity	GO:0005622|intracellular GO:0005739|mitochondrion GO:0005743|mitochondrial inner membrane GO:0005758|mitochondrial intermembrane space GO:0009507|chloroplast
pt2_04708	A	A1S	Potri.001G452200	Potri.001G452200(AS)	POPTR_0001s45650	sp|Q7F9W2|Y4814_ORYSJ	B3 domain-containing protein Os04g0581400 OS=Oryza sativa subsp. japonica GN=Os04g0581400 PE=2 SV=2	AT2G46870.1	| Symbols: NGA1 | AP2/B3-like transcriptional factor family protein | chr2:19261313-19262245 FORWARD LENGTH=310	LOC_Os04g49230.1	protein|B3 DNA binding domain containing protein, expressed	IMGA|Medtr5g053920.1	AP2 domain-containing transcription factor chr5 21647649-21649266 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009908|flower development GO:0048366|leaf development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04709	A	A1S	Potri.001G452300	Potri.001G452300(AS)	POPTR_0001s45660	NA	NA	NA	NA	NA	NA	IMGA|contig_61785_1.1	Unknown protein contig_61785 1416-3936 E PREDN 20111014	GO:0006487|protein N-linked glycosylation GO:0007165|signal transduction GO:0008150|biological_process GO:0009755|hormone-mediated signaling pathway	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_04710	A	A1S	Potri.001G452400	Potri.001G452400(AS)	POPTR_0001s45670	sp|Q9SZN7|HIP26_ARATH	Heavy metal-associated isoprenylated plant protein 26 OS=Arabidopsis thaliana GN=HIPP26 PE=1 SV=1	AT2G18196.1	| Symbols: | Heavy metal transport/detoxification superfamily protein | chr2:7920793-7922268 REVERSE LENGTH=178	LOC_Os03g02860.1	protein|heavy metal-associated domain containing protein, expressed	IMGA|Medtr5g025150.1	hypothetical protein chr5 9939089-9937962 E EGN_Mt100125 20111014	GO:0030001|metal ion transport	GO:0046872|metal ion binding	GO:0005575|cellular_component GO:0005576|extracellular region
pt2_04711	A	A1S	Potri.001G452500	Potri.001G452500(AS)	POPTR_0001s45680	NA	NA	AT1G33055.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: anaerobic respiration; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; Has 20 Blast hits to 20 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:11972336-11972536 REVERSE LENGTH=66	NA	NA	NA	NA	GO:0009061|anaerobic respiration GO:0009855|determination of bilateral symmetry GO:0009944|polarity specification of adaxial/abaxial axis GO:0010014|meristem initiation GO:0010075|regulation of meristem growth	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_04712	A	A1S	Potri.001G452600	Potri.001G452600(AS)	POPTR_0001s45690	sp|Q9SV68|QORH_ARATH	Putative quinone-oxidoreductase homolog, chloroplastic OS=Arabidopsis thaliana GN=At4g13010 PE=2 SV=1	AT4G13010.1	| Symbols: | Oxidoreductase, zinc-binding dehydrogenase family protein | chr4:7600682-7602567 FORWARD LENGTH=329	LOC_Os04g30420.1	protein|dehydrogenase, putative, expressed	IMGA|AC225458_92.1	Quinone oxidoreductase-like protein AC225458.11 328100-329713 H EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0008270|zinc ion binding GO:0016491|oxidoreductase activity	GO:0005737|cytoplasm GO:0005773|vacuole GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009941|chloroplast envelope
pt2_04713	A	A1S	Potri.001G452700	Potri.001G452700(AS)	POPTR_0001s45700	sp|Q7GCL7|NAC74_ORYSJ	NAC domain-containing protein 74 OS=Oryza sativa subsp. japonica GN=NAC74 PE=2 SV=1	AT1G33060.1	| Symbols: ANAC014, NAC014 | NAC 014 | chr1:11975518-11978493 REVERSE LENGTH=648	LOC_Os08g06140.1	protein|no apical meristem protein, putative, expressed	IMGA|Medtr5g069030.1	NAC domain protein chr5 28228664-28232502 E EGN_Mt100125 20111014	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0006355|regulation of transcription, DNA-dependent GO:0007275|multicellular organismal development GO:0009086|methionine biosynthetic process GO:0009616|virus induced gene silencing GO:0010050|vegetative phase change	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04714	A	A1S	Potri.001G452800	Potri.001G452800(AS)	POPTR_0001s45710	NA	NA	AT2G45530.1	| Symbols: | RING/U-box superfamily protein | chr2:18756604-18757326 FORWARD LENGTH=240	NA	NA	NA	NA	NA	GO:0008270|zinc ion binding	GO:0005737|cytoplasm
pt2_04715	A	A1S	Potri.001G452900	Potri.001G452900(AS)	POPTR_0001s45720	NA	NA	AT1G63310.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G20362.1); Has 78 Blast hits to 77 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:23486580-23487044 REVERSE LENGTH=154	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04716	G	G1	NA	NA	POPTR_0001s45730	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04717	A	A2S	Potri.001G453100	Potri.001G453100(AS) Potri.011G148900(DS)	POPTR_0001s45740	NA	NA	AT5G19790.1	| Symbols: RAP2.11 | related to AP2 11 | chr5:6689271-6690032 REVERSE LENGTH=253	LOC_Os07g10410.1	protein|AP2 domain containing protein, expressed	IMGA|contig_81134_1.1	Ethylene responsive transcription factor 2b contig_81134 2959-3876 H PREDN 20111014	GO:0000302|response to reactive oxygen species GO:0009723|response to ethylene stimulus GO:0035865|cellular response to potassium ion GO:0048528|post-embryonic root development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_04718	A	A1S	Potri.001G453200	Potri.001G453200(AS)	POPTR_0001s45750	sp|P52948|NUP98_HUMAN	Nuclear pore complex protein Nup98-Nup96 OS=Homo sapiens GN=NUP98 PE=1 SV=4	AT1G10390.2	| Symbols: | Nucleoporin autopeptidase | chr1:3407265-3412045 REVERSE LENGTH=1041	LOC_Os12g06890.1	protein|OsNucAP3 - Putative Nucleoporin Autopeptidase homologue, expressed	IMGA|Medtr5g097890.1	Nuclear pore complex protein Nup98-Nup96 chr5 41828010-41835106 E EGN_Mt100125 20111014	GO:0006810|transport	GO:0005215|transporter activity GO:0005515|protein binding	GO:0005634|nucleus GO:0005635|nuclear envelope GO:0005643|nuclear pore
pt2_04719	A	A1S	Potri.001G453400	Potri.001G453400(AS)	POPTR_0001s45760	NA	NA	AT1G73940.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49410.2); Has 54 Blast hits to 54 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:27798519-27799522 REVERSE LENGTH=151	LOC_Os03g63550.1	protein|expressed protein	IMGA|Medtr5g097230.1	hypothetical protein chr5 41531626-41528678 F EGN_Mt100125 20111014	GO:0006364|rRNA processing GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_04720	A	A1S	Potri.001G453500	Potri.001G453500(AS)	POPTR_0001s45770	sp|Q8N5I4|DHRSX_HUMAN	Dehydrogenase/reductase SDR family member on chromosome X OS=Homo sapiens GN=DHRSX PE=2 SV=2	AT5G15940.1	| Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr5:5202801-5204715 FORWARD LENGTH=364	LOC_Os09g17750.1	protein|oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed	NA	NA	GO:0008152|metabolic process	GO:0000166|nucleotide binding GO:0016491|oxidoreductase activity	NA
pt2_04721	A	A2S	Potri.001G453600	Potri.001G453600(AS) Potri.011G148000(BS)	POPTR_0001s45780	sp|P53492|ACT7_ARATH	Actin-7 OS=Arabidopsis thaliana GN=ACT7 PE=1 SV=1	AT5G09810.1	| Symbols: ACT7 | actin 7 | chr5:3052809-3054220 FORWARD LENGTH=377	LOC_Os11g06390.1	protein|actin, putative, expressed	IMGA|Medtr5g066400.1	Actin-related protein chr5 27024745-27037702 F EGN_Mt100125 20111014	GO:0006007|glucose catabolic process GO:0006094|gluconeogenesis GO:0007010|cytoskeleton organization GO:0009416|response to light stimulus GO:0009611|response to wounding GO:0009733|response to auxin stimulus GO:0009845|seed germination GO:0010053|root epidermal cell differentiation GO:0010498|proteasomal protein catabolic process GO:0032880|regulation of protein localization GO:0048364|root development GO:0048767|root hair elongation	GO:0005200|structural constituent of cytoskeleton GO:0005515|protein binding GO:0005524|ATP binding	GO:0005618|cell wall GO:0005730|nucleolus GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0005829|cytosol GO:0005856|cytoskeleton GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope
pt2_04722	A	A1S	Potri.001G453700	Potri.001G453700(AS)	POPTR_0001s45790	sp|A3C6D7|ACT2_ORYSJ	Actin-2 OS=Oryza sativa subsp. japonica GN=ACT2 PE=2 SV=1	AT5G09810.1	| Symbols: ACT7 | actin 7 | chr5:3052809-3054220 FORWARD LENGTH=377	LOC_Os10g36650.1	protein|actin, putative, expressed	NA	NA	GO:0006007|glucose catabolic process GO:0006094|gluconeogenesis GO:0007010|cytoskeleton organization GO:0009416|response to light stimulus GO:0009611|response to wounding GO:0009733|response to auxin stimulus GO:0009845|seed germination GO:0010053|root epidermal cell differentiation GO:0010498|proteasomal protein catabolic process GO:0032880|regulation of protein localization GO:0048364|root development GO:0048767|root hair elongation	GO:0005200|structural constituent of cytoskeleton GO:0005515|protein binding GO:0005524|ATP binding	GO:0005618|cell wall GO:0005730|nucleolus GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0005829|cytosol GO:0005856|cytoskeleton GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope
pt2_04723	A	A1S	Potri.001G453800	Potri.001G453800(AS)	POPTR_0001s45800	sp|Q9FGJ6|ATL79_ARATH	RING-H2 finger protein ATL79 OS=Arabidopsis thaliana GN=ATL79 PE=2 SV=1	AT5G47610.1	| Symbols: | RING/U-box superfamily protein | chr5:19301399-19301899 REVERSE LENGTH=166	LOC_Os05g40020.1	protein|RING-H2 finger protein, putative, expressed	IMGA|Medtr5g024730.1	Ring finger protein chr5 9683574-9684454 F EGN_Mt100125 20111014	NA	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_04724	B	B2S	Potri.001G453900	Potri.001G453900(BS) Potri.001G454000(BS)	POPTR_0001s45810	sp|P49210|RL9_ORYSJ	60S ribosomal protein L9 OS=Oryza sativa subsp. japonica GN=RPL9 PE=2 SV=3	AT1G33140.1	| Symbols: PGY2 | Ribosomal protein L6 family | chr1:12023360-12024502 FORWARD LENGTH=194	LOC_Os09g31180.1	protein|ribosomal protein L6, putative, expressed	IMGA|Medtr5g068780.1	60S ribosomal protein l9 chr5 28149768-28147233 H EGN_Mt100125 20111014	GO:0006412|translation GO:0009955|adaxial/abaxial pattern specification	GO:0003735|structural constituent of ribosome GO:0019843|rRNA binding	GO:0005622|intracellular GO:0005737|cytoplasm GO:0005773|vacuole GO:0005840|ribosome GO:0009506|plasmodesma GO:0009941|chloroplast envelope GO:0015934|large ribosomal subunit GO:0016020|membrane GO:0022625|cytosolic large ribosomal subunit
pt2_04725	A	A2S	Potri.001G453900	Potri.001G453900(AS) Potri.001G454000(AS)	POPTR_0001s45820	sp|P49210|RL9_ORYSJ	60S ribosomal protein L9 OS=Oryza sativa subsp. japonica GN=RPL9 PE=2 SV=3	AT1G33140.1	| Symbols: PGY2 | Ribosomal protein L6 family | chr1:12023360-12024502 FORWARD LENGTH=194	LOC_Os09g31180.1	protein|ribosomal protein L6, putative, expressed	IMGA|Medtr5g068780.1	60S ribosomal protein l9 chr5 28149768-28147233 H EGN_Mt100125 20111014	GO:0006412|translation GO:0009955|adaxial/abaxial pattern specification	GO:0003735|structural constituent of ribosome GO:0019843|rRNA binding	GO:0005622|intracellular GO:0005737|cytoplasm GO:0005773|vacuole GO:0005840|ribosome GO:0009506|plasmodesma GO:0009941|chloroplast envelope GO:0015934|large ribosomal subunit GO:0016020|membrane GO:0022625|cytosolic large ribosomal subunit
pt2_04726	A	A1S	Potri.001G454100	Potri.001G454100(AS)	POPTR_0001s45830	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04727	A	A1S	Potri.001G454200	Potri.001G454200(AS)	POPTR_0001s45840	sp|A1EC95|HEAT6_RAT	HEAT repeat-containing protein 6 OS=Rattus norvegicus GN=Heatr6 PE=2 SV=1	AT4G38120.1	| Symbols: | ARM repeat superfamily protein | chr4:17888668-17896060 REVERSE LENGTH=1165	LOC_Os08g05670.1	protein|HEAT repeat family protein, putative, expressed	NA	NA	GO:0008150|biological_process	NA	GO:0005634|nucleus GO:0005739|mitochondrion GO:0005774|vacuolar membrane
pt2_04728	A	A1S	Potri.001G454300	Potri.001G454300(AS)	POPTR_0001s45850	sp|Q9C884|PMTI_ARATH	Probable methyltransferase PMT18 OS=Arabidopsis thaliana GN=At1g33170 PE=2 SV=1	AT1G33170.1	| Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr1:12027262-12030397 FORWARD LENGTH=639	LOC_Os06g01450.1	protein|methyltransferase, putative, expressed	IMGA|Medtr1g101370.1	hypothetical protein chr1 29962059-29958768 H EGN_Mt100125 20111014	NA	GO:0008168|methyltransferase activity	NA
pt2_04729	A	A1S	Potri.001G454400	Potri.001G454400(AS)	POPTR_0001s45860	sp|A0PK00|T120B_HUMAN	Transmembrane protein 120B OS=Homo sapiens GN=TMEM120B PE=2 SV=1	AT1G33230.1	| Symbols: | TMPIT-like protein | chr1:12046844-12049794 FORWARD LENGTH=347	LOC_Os02g01720.1	protein|transmembrane protein 120A, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005737|cytoplasm GO:0016021|integral to membrane
pt2_04730	A	A1S	Potri.001G454500	Potri.001G454500(AS)	POPTR_0001s45870	sp|Q9C882|GTL1_ARATH	Trihelix transcription factor GTL1 OS=Arabidopsis thaliana GN=GTL1 PE=1 SV=2	AT1G33240.1	| Symbols: AT-GTL1, AT-GTL2, GTL1 | GT-2-like 1 | chr1:12051859-12054320 REVERSE LENGTH=669	LOC_Os10g37240.3	protein|expressed protein	IMGA|Medtr1g081180.1	Trihelix transcription factor chr1 20670509-20668424 E EGN_Mt100125 20111014	NA	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_04731	A	A1S	Potri.001G454600	Potri.001G454600(AS)	POPTR_0001s45880	NA	NA	AT1G33250.1	| Symbols: | Protein of unknown function (DUF604) | chr1:12057524-12059346 REVERSE LENGTH=548	LOC_Os10g37260.1	protein|fringe-related protein, putative, expressed	IMGA|Medtr5g008060.1	"Beta-1,3-glucosyltransferase" chr5 1416021-1418074 E EGN_Mt100125 20111014	NA	GO:0016757|transferase activity, transferring glycosyl groups	GO:0005794|Golgi apparatus
pt2_04732	A	A1S	Potri.001G454700	Potri.001G454700(AS)	POPTR_0001s45890	sp|P14133|ASO_CUCSA	L-ascorbate oxidase OS=Cucumis sativus PE=1 SV=1	AT4G39830.1	| Symbols: | Cupredoxin superfamily protein | chr4:18479103-18481184 FORWARD LENGTH=582	LOC_Os09g20090.1	protein|L-ascorbate oxidase precursor, putative, expressed	IMGA|Medtr5g069680.1	Laccase 1a chr5 28563726-28567609 H EGN_Mt100125 20111014	GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process GO:0016126|sterol biosynthetic process GO:0046520|sphingoid biosynthetic process GO:0055114|oxidation-reduction process	GO:0005507|copper ion binding GO:0016491|oxidoreductase activity	GO:0005576|extracellular region
pt2_04733	A	A1S	Potri.001G454800	Potri.001G454800(AS)	POPTR_0001s45900	sp|B3LFC0|Y1332_ARATH	Probable receptor-like protein kinase At1g33260 OS=Arabidopsis thaliana GN=At1g33260 PE=2 SV=1	AT1G33260.2	| Symbols: | Protein kinase superfamily protein | chr1:12064796-12066114 FORWARD LENGTH=348	LOC_Os04g45730.1	protein|protein kinase domain containing protein, expressed	IMGA|Medtr5g058090.1	Receptor-like protein kinase chr5 23323996-23335232 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04734	A	A1S	Potri.001G454900	Potri.001G454900(AS)	POPTR_0001s45910	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	NA	GO:0009507|chloroplast GO:0016020|membrane
pt2_04735	A	A1S	Potri.001G455000	Potri.001G455000(AS)	POPTR_0001s45920	sp|Q9SV84|NIP51_ARATH	Probable aquaporin NIP5-1 OS=Arabidopsis thaliana GN=NIP5-1 PE=2 SV=1	AT4G10380.1	| Symbols: NIP5;1, NLM6, NLM8 | NOD26-like intrinsic protein 5;1 | chr4:6431530-6434510 REVERSE LENGTH=304	LOC_Os10g36924.1	protein|aquaporin protein, putative, expressed	IMGA|Medtr1g097840.1	Aquaporin NIP3-1 chr1 27981067-27985566 E EGN_Mt100125 20111014	GO:0000041|transition metal ion transport GO:0006810|transport GO:0006826|iron ion transport GO:0010036|response to boron-containing substance GO:0010106|cellular response to iron ion starvation GO:0010167|response to nitrate GO:0015700|arsenite transport GO:0015706|nitrate transport GO:0046685|response to arsenic-containing substance GO:0046713|borate transport GO:0080029|cellular response to boron-containing substance levels	GO:0005215|transporter activity GO:0015105|arsenite transmembrane transporter activity GO:0015250|water channel activity GO:0046715|borate transmembrane transporter activity GO:0080138|borate uptake transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane GO:0016328|lateral plasma membrane
pt2_04736	A	A1S	Potri.001G455100	Potri.001G455100(AS)	POPTR_0001s45930	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04737	A	A1S	Potri.001G455200	Potri.001G455200(AS)	POPTR_0001s45940	sp|Q9FNP9|AGCT_ARATH	Agmatine coumaroyltransferase OS=Arabidopsis thaliana GN=ACT PE=1 SV=1	AT5G39050.1	| Symbols: | HXXXD-type acyl-transferase family protein | chr5:15634596-15636005 FORWARD LENGTH=469	LOC_Os02g57480.1	protein|transferase family protein, putative, expressed	IMGA|contig_88875_1.1	Malonyl CoA anthocyanin 5-O-glucoside-6'-O-malonyltransferase contig_88875 1283-550 E PREDN 20111014	NA	GO:0016740|transferase activity GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups GO:0050736|O-malonyltransferase activity	GO:0005575|cellular_component GO:0005737|cytoplasm GO:0005829|cytosol
pt2_04738	A	A1S	Potri.001G455200	Potri.001G455200(AS)	POPTR_0001s45940	sp|Q9FNP9|AGCT_ARATH	Agmatine coumaroyltransferase OS=Arabidopsis thaliana GN=ACT PE=1 SV=1	AT5G39050.1	| Symbols: | HXXXD-type acyl-transferase family protein | chr5:15634596-15636005 FORWARD LENGTH=469	LOC_Os02g57480.1	protein|transferase family protein, putative, expressed	IMGA|contig_88875_1.1	Malonyl CoA anthocyanin 5-O-glucoside-6'-O-malonyltransferase contig_88875 1283-550 E PREDN 20111014	NA	GO:0016740|transferase activity GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups GO:0050736|O-malonyltransferase activity	GO:0005575|cellular_component GO:0005737|cytoplasm GO:0005829|cytosol
pt2_04739	A	A1S	Potri.001G455200	Potri.001G455200(AS)	POPTR_0001s45940	sp|Q9FNP9|AGCT_ARATH	Agmatine coumaroyltransferase OS=Arabidopsis thaliana GN=ACT PE=1 SV=1	AT5G39050.1	| Symbols: | HXXXD-type acyl-transferase family protein | chr5:15634596-15636005 FORWARD LENGTH=469	LOC_Os02g57480.1	protein|transferase family protein, putative, expressed	IMGA|contig_88875_1.1	Malonyl CoA anthocyanin 5-O-glucoside-6'-O-malonyltransferase contig_88875 1283-550 E PREDN 20111014	NA	GO:0016740|transferase activity GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups GO:0050736|O-malonyltransferase activity	GO:0005575|cellular_component GO:0005737|cytoplasm GO:0005829|cytosol
pt2_04740	A	A2S	Potri.001G455300	Potri.001G455300(AS) Potri.011G146700(DS)	POPTR_0001s45950	sp|Q9FHN8|KCBP_ARATH	Kinesin-like calmodulin-binding protein OS=Arabidopsis thaliana GN=KCBP PE=1 SV=1	AT5G65930.2	| Symbols: ZWI, PKCBP, KCBP | kinesin-like calmodulin-binding protein (ZWICHEL) | chr5:26370369-26376394 REVERSE LENGTH=1260	LOC_Os04g57140.2	protein|kinesin motor domain containing protein, putative, expressed	IMGA|Medtr5g025100.1	Kinesin-like calmodulin binding protein chr5 9906116-9897926 E EGN_Mt100125 20111014	GO:0009846|pollen germination GO:0010091|trichome branching GO:0055114|oxidation-reduction process	GO:0003777|microtubule motor activity GO:0003824|catalytic activity GO:0005515|protein binding GO:0005516|calmodulin binding GO:0005524|ATP binding GO:0008017|microtubule binding GO:0016491|oxidoreductase activity GO:0016887|ATPase activity	GO:0005856|cytoskeleton GO:0005886|plasma membrane
pt2_04741	A	A1S	Potri.001G455400	Potri.001G455400(AS)	POPTR_0001s45960	sp|Q05963|FL3H_CALCH	Naringenin,2-oxoglutarate 3-dioxygenase OS=Callistephus chinensis GN=FHT PE=2 SV=1	AT1G14130.1	| Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr1:4836041-4837040 REVERSE LENGTH=308	LOC_Os04g39980.1	protein|gibberellin 20 oxidase 2, putative, expressed	IMGA|Medtr5g025090.1	1-aminocyclopropane-1-carboxylate oxidase chr5 9896148-9893858 E EGN_Mt100125 20111014	GO:0008150|biological_process GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_04742	A	A1S	Potri.001G455500	Potri.001G455500(AS)	POPTR_0001s45970	sp|Q9FG33|LRKS5_ARATH	Probable L-type lectin-domain containing receptor kinase S.5 OS=Arabidopsis thaliana GN=LECRKS5 PE=2 SV=1	AT5G06740.1	| Symbols: | Concanavalin A-like lectin protein kinase family protein | chr5:2084094-2086052 FORWARD LENGTH=652	LOC_Os08g40280.1	protein|lectin-like protein kinase, putative, expressed	IMGA|Medtr5g025020.1	Lectin-domain containing receptor kinase A4.2 chr5 9874453-9867404 E EGN_Mt100125 20111014	GO:0000041|transition metal ion transport GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_04743	A	A1S	Potri.001G455600	Potri.001G455600(AS)	POPTR_0001s45980	sp|Q55FG3|VP13C_DICDI	Putative vacuolar protein sorting-associated protein 13C OS=Dictyostelium discoideum GN=tipC PE=3 SV=1	AT5G24740.1	| Symbols: | Protein of unknown function (DUF1162) | chr5:8470073-8489703 REVERSE LENGTH=3464	LOC_Os08g02350.1	protein|expressed protein	NA	NA	GO:0006396|RNA processing GO:0008104|protein localization GO:0009887|organ morphogenesis GO:0009888|tissue development GO:0010413|glucuronoxylan metabolic process GO:0010638|positive regulation of organelle organization GO:0033044|regulation of chromosome organization GO:0045492|xylan biosynthetic process	NA	GO:0005794|Golgi apparatus
pt2_04744	C	C1S	Potri.001G455700	Potri.001G455700(CS)	sp|Q54LB8|VP13A_DICDI	Putative vacuolar protein sorting-associated protein 13A OS=Dictyostelium discoideum GN=vps13A PE=2 SV=1	AT5G24740.1	| Symbols: | Protein of unknown function (DUF1162) | chr5:8470073-8489703 REVERSE LENGTH=3464	LOC_Os08g02354.1	protein|expressed protein	IMGA|Medtr5g013780.1	Vacuolar protein sorting-associated protein 13A chr5 4187757-4241753 E EGN_Mt100125 20111014	GO:0006396|RNA processing GO:0008104|protein localization GO:0009887|organ morphogenesis GO:0009888|tissue development GO:0010413|glucuronoxylan metabolic process GO:0010638|positive regulation of organelle organization GO:0033044|regulation of chromosome organization GO:0045492|xylan biosynthetic process	NA	GO:0005794|Golgi apparatus
pt2_04745	A	A2S	Potri.001G455800	Potri.001G455800(AS) Potri.011G146300(DS)	POPTR_0001s46000	sp|O65351|SUBL_ARATH	Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1	AT4G10550.1	| Symbols: | Subtilase family protein | chr4:6516613-6519767 REVERSE LENGTH=778	LOC_Os06g41880.1	protein|OsSub51 - Putative Subtilisin homologue, expressed	IMGA|Medtr5g025010.1	Subtilisin-like protease chr5 9863093-9866617 E EGN_Mt100125 20111014	GO:0006508|proteolysis GO:0008152|metabolic process GO:0043086|negative regulation of catalytic activity	GO:0004252|serine-type endopeptidase activity GO:0042802|identical protein binding	GO:0005576|extracellular region GO:0005618|cell wall GO:0009507|chloroplast
pt2_04746	A	A1S	Potri.001G455900	Potri.001G455900(AS)	POPTR_0001s46010	NA	NA	AT3G51510.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 42 Blast hits to 42 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr3:19109118-19109842 FORWARD LENGTH=181	LOC_Os05g41190.1	protein|expressed protein	NA	NA	GO:0000023|maltose metabolic process GO:0008150|biological_process GO:0019252|starch biosynthetic process GO:0043085|positive regulation of catalytic activity	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane
pt2_04747	A	A1S	Potri.001G456000	Potri.001G456000(AS)	POPTR_0001s46020	NA	NA	AT3G43660.1	| Symbols: | Vacuolar iron transporter (VIT) family protein | chr3:15565332-15565928 FORWARD LENGTH=198	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_04748	A	A1S	Potri.001G456100	Potri.001G456100(AS)	POPTR_0001s46030	NA	NA	NA	NA	NA	NA	NA	NA	GO:0009555|pollen development	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_04749	A	A1S	Potri.001G456200	Potri.001G456200(AS)	POPTR_0001s46040	NA	NA	AT1G20925.1	| Symbols: | Auxin efflux carrier family protein | chr1:7289973-7292507 FORWARD LENGTH=472	LOC_Os09g31478.1	protein|auxin efflux carrier component, putative, expressed	IMGA|Medtr5g024960.1	hypothetical protein chr5 9834327-9835162 H EGN_Mt100125 20111014	GO:0009926|auxin polar transport GO:0055085|transmembrane transport	GO:0009672|auxin:hydrogen symporter activity	GO:0016021|integral to membrane
pt2_04750	A	A1S	Potri.001G456200	Potri.001G456200(AS)	POPTR_0001s46040	NA	NA	AT1G20925.1	| Symbols: | Auxin efflux carrier family protein | chr1:7289973-7292507 FORWARD LENGTH=472	LOC_Os09g31478.1	protein|auxin efflux carrier component, putative, expressed	IMGA|Medtr5g024960.1	hypothetical protein chr5 9834327-9835162 H EGN_Mt100125 20111014	GO:0009926|auxin polar transport GO:0055085|transmembrane transport	GO:0009672|auxin:hydrogen symporter activity	GO:0016021|integral to membrane
pt2_04751	A	A1S	Potri.001G456200	Potri.001G456200(AS)	POPTR_0001s46040	NA	NA	AT1G20925.1	| Symbols: | Auxin efflux carrier family protein | chr1:7289973-7292507 FORWARD LENGTH=472	LOC_Os09g31478.1	protein|auxin efflux carrier component, putative, expressed	IMGA|Medtr5g024960.1	hypothetical protein chr5 9834327-9835162 H EGN_Mt100125 20111014	GO:0009926|auxin polar transport GO:0055085|transmembrane transport	GO:0009672|auxin:hydrogen symporter activity	GO:0016021|integral to membrane
pt2_04752	A	A1S	Potri.001G456300	Potri.001G456300(AS)	POPTR_0001s46050	NA	NA	AT1G20925.1	| Symbols: | Auxin efflux carrier family protein | chr1:7289973-7292507 FORWARD LENGTH=472	LOC_Os09g31478.1	protein|auxin efflux carrier component, putative, expressed	IMGA|Medtr5g024970.1	Auxin efflux carrier protein chr5 9837511-9840517 F EGN_Mt100125 20111014	GO:0009926|auxin polar transport GO:0055085|transmembrane transport	GO:0009672|auxin:hydrogen symporter activity	GO:0016021|integral to membrane
pt2_04753	A	A1S	Potri.001G456400	Potri.001G456400(AS)	POPTR_0001s46060	NA	NA	AT1G76520.2	| Symbols: | Auxin efflux carrier family protein | chr1:28715384-28717289 FORWARD LENGTH=390	LOC_Os09g31478.1	protein|auxin efflux carrier component, putative, expressed	IMGA|Medtr5g024970.1	Auxin efflux carrier protein chr5 9837511-9840517 F EGN_Mt100125 20111014	GO:0009926|auxin polar transport GO:0015824|proline transport GO:0019344|cysteine biosynthetic process GO:0055085|transmembrane transport	GO:0009672|auxin:hydrogen symporter activity	GO:0016021|integral to membrane
pt2_04754	A	A1S	Potri.001G456400	Potri.001G456400(AS)	POPTR_0001s46060	NA	NA	AT1G76520.2	| Symbols: | Auxin efflux carrier family protein | chr1:28715384-28717289 FORWARD LENGTH=390	LOC_Os09g31478.1	protein|auxin efflux carrier component, putative, expressed	IMGA|Medtr5g024970.1	Auxin efflux carrier protein chr5 9837511-9840517 F EGN_Mt100125 20111014	GO:0009926|auxin polar transport GO:0015824|proline transport GO:0019344|cysteine biosynthetic process GO:0055085|transmembrane transport	GO:0009672|auxin:hydrogen symporter activity	GO:0016021|integral to membrane
pt2_04755	A	A1S	Potri.001G456400	Potri.001G456400(AS)	POPTR_0001s46060	NA	NA	AT1G76520.2	| Symbols: | Auxin efflux carrier family protein | chr1:28715384-28717289 FORWARD LENGTH=390	LOC_Os09g31478.1	protein|auxin efflux carrier component, putative, expressed	IMGA|Medtr5g024970.1	Auxin efflux carrier protein chr5 9837511-9840517 F EGN_Mt100125 20111014	GO:0009926|auxin polar transport GO:0015824|proline transport GO:0019344|cysteine biosynthetic process GO:0055085|transmembrane transport	GO:0009672|auxin:hydrogen symporter activity	GO:0016021|integral to membrane
pt2_04756	A	A1S	Potri.001G456500	Potri.001G456500(AS)	POPTR_0001s46070	sp|Q940Y3|ARID3_ARATH	AT-rich interactive domain-containing protein 3 OS=Arabidopsis thaliana GN=ARID3 PE=2 SV=1	AT2G17410.2	| Symbols: | ARID/BRIGHT DNA-binding domain-containing protein | chr2:7559869-7563474 FORWARD LENGTH=780	LOC_Os06g41730.2	protein|ARID/BRIGHT DNA-binding domain-containing protein, putative, expressed	IMGA|Medtr5g024920.1	AT-rich interactive domain-containing protein chr5 9825994-9819069 E EGN_Mt100125 20111014	GO:0006346|methylation-dependent chromatin silencing GO:0006355|regulation of transcription, DNA-dependent GO:0009630|gravitropism GO:0016246|RNA interference	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005622|intracellular GO:0005634|nucleus
pt2_04757	A	A1S	Potri.001G456600	Potri.001G456600(AS)	POPTR_0001s46080	sp|Q9FN02|PPP7_ARATH	Serine/threonine-protein phosphatase 7 OS=Arabidopsis thaliana GN=PP7 PE=1 SV=1	AT5G63870.1	| Symbols: PP7, ATPP7 | serine/threonine phosphatase 7 | chr5:25561336-25562908 REVERSE LENGTH=413	LOC_Os08g40200.1	protein|Ser/Thr protein phosphatase family protein, putative, expressed	IMGA|Medtr5g093990.1	Serine/threonine protein phosphatase chr5 40021795-40016499 F EGN_Mt100125 20111014	GO:0009408|response to heat GO:0009785|blue light signaling pathway	GO:0004722|protein serine/threonine phosphatase activity GO:0016787|hydrolase activity	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_04758	A	A1S	Potri.001G456600	Potri.001G456600(AS)	POPTR_0001s46080	sp|Q9FN02|PPP7_ARATH	Serine/threonine-protein phosphatase 7 OS=Arabidopsis thaliana GN=PP7 PE=1 SV=1	AT5G63870.1	| Symbols: PP7, ATPP7 | serine/threonine phosphatase 7 | chr5:25561336-25562908 REVERSE LENGTH=413	LOC_Os08g40200.1	protein|Ser/Thr protein phosphatase family protein, putative, expressed	IMGA|Medtr5g093990.1	Serine/threonine protein phosphatase chr5 40021795-40016499 F EGN_Mt100125 20111014	GO:0009408|response to heat GO:0009785|blue light signaling pathway	GO:0004722|protein serine/threonine phosphatase activity GO:0016787|hydrolase activity	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_04759	A	A1S	Potri.001G456700	Potri.001G456700(AS)	POPTR_0001s46090	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04760	C	C1S	Potri.001G456800	Potri.001G456800(CS)	sp|Q39242|TRXB2_ARATH	Thioredoxin reductase 2 OS=Arabidopsis thaliana GN=NTR2 PE=2 SV=2	AT2G17420.1	| Symbols: NTRA, ATNTRA, NTR2 | NADPH-dependent thioredoxin reductase A | chr2:7564357-7566219 FORWARD LENGTH=378	LOC_Os02g48290.1	protein|thioredoxin reductase 2, putative, expressed	IMGA|Medtr5g024900.1	Thioredoxin reductase chr5 9811433-9806790 F EGN_Mt100125 20111014	GO:0009846|pollen germination GO:0016049|cell growth GO:0019430|removal of superoxide radicals GO:0042964|thioredoxin biosynthetic process GO:0045454|cell redox homeostasis GO:0046686|response to cadmium ion GO:0048316|seed development GO:0055114|oxidation-reduction process	GO:0004791|thioredoxin-disulfide reductase activity GO:0016491|oxidoreductase activity GO:0050660|flavin adenine dinucleotide binding	GO:0005737|cytoplasm GO:0005759|mitochondrial matrix GO:0005829|cytosol GO:0009507|chloroplast
pt2_04761	A	A1S	Potri.001G456900	Potri.001G456900(AS)	POPTR_0001s46110	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04762	A	A1S	Potri.001G457000	Potri.001G457000(AS)	POPTR_0001s46120	sp|P29057|HMDH1_HEVBR	3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 OS=Hevea brasiliensis GN=HMGR1 PE=2 SV=1	AT1G76490.1	| Symbols: HMG1, HMGR1, AtHMGR1 | hydroxy methylglutaryl CoA reductase 1 | chr1:28695801-28698206 FORWARD LENGTH=642	LOC_Os08g40180.1	protein|3-hydroxy-3-methylglutaryl-coenzyme A reductase, putative, expressed	IMGA|Medtr5g024880.1	3-hydroxy-3-methylglutaryl coenzyme A reductase chr5 9788604-9791444 F EGN_Mt100125 20111014	GO:0006816|calcium ion transport GO:0007030|Golgi organization GO:0007033|vacuole organization GO:0008299|isoprenoid biosynthetic process GO:0009611|response to wounding GO:0009651|response to salt stress GO:0009805|coumarin biosynthetic process GO:0015936|coenzyme A metabolic process GO:0016126|sterol biosynthetic process GO:0019287|isopentenyl diphosphate biosynthetic process, mevalonate pathway GO:0055114|oxidation-reduction process GO:0060964|regulation of gene silencing by miRNA	GO:0004420|hydroxymethylglutaryl-CoA reductase (NADPH) activity GO:0005515|protein binding GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0042282|hydroxymethylglutaryl-CoA reductase activity GO:0050661|NADP binding GO:0050662|coenzyme binding	GO:0005783|endoplasmic reticulum GO:0005789|endoplasmic reticulum membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_04763	C	C1S	Potri.001G457100	Potri.001G457100(CS)	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006091|generation of precursor metabolites and energy GO:0006354|DNA-dependent transcription, elongation GO:0009769|photosynthesis, light harvesting in photosystem II GO:0009772|photosynthetic electron transport in photosystem II GO:0010207|photosystem II assembly GO:0015979|photosynthesis GO:0019684|photosynthesis, light reaction	GO:0045156|electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity GO:0045157|electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity	GO:0005737|cytoplasm GO:0009507|chloroplast GO:0009523|photosystem II GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009579|thylakoid GO:0010287|plastoglobule GO:0016020|membrane GO:0030076|light-harvesting complex
pt2_04764	A	A1S	Potri.001G457200	Potri.001G457200(AS)	POPTR_0001s46140	NA	NA	AT5G65950.1	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1683, C-terminal (InterPro:IPR012880), Foie gras liver health family 1 (InterPro:IPR021773); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:26380290-26384960 FORWARD LENGTH=1190	LOC_Os02g48380.1	protein|expressed protein	NA	NA	GO:0006486|protein glycosylation GO:0008150|biological_process GO:0030244|cellulose biosynthetic process GO:0048193|Golgi vesicle transport	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_04765	C	C1S	Potri.001G457300	Potri.001G457300(CS)	sp|A3KPF8|PP131_ARATH	Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidopsis thaliana GN=At1g79080 PE=2 SV=1	AT1G79080.1	| Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:29747102-29748832 REVERSE LENGTH=576	LOC_Os02g35750.1	protein|pentatricopeptide repeat domain containing protein, putative, expressed	IMGA|Medtr5g090170.1	Auxin response factor chr5 38240367-38247794 E EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005739|mitochondrion
pt2_04766	A	A1S	Potri.001G457400	Potri.001G457400(AS)	POPTR_0001s46160	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04767	A	A1S	Potri.001G457600	Potri.001G457600(AS)	POPTR_0001s46170	sp|P93820|Y1439_ARATH	BTB/POZ domain-containing protein At1g04390 OS=Arabidopsis thaliana GN=At1g04390 PE=2 SV=3	AT1G04390.1	| Symbols: | BTB/POZ domain-containing protein | chr1:1179678-1183615 REVERSE LENGTH=849	LOC_Os06g46240.1	protein|BTB/POZ domain containing protein, putative, expressed	NA	NA	GO:0008150|biological_process GO:0009954|proximal/distal pattern formation GO:0010227|floral organ abscission GO:0048439|flower morphogenesis	NA	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_04768	A	A1S	Potri.001G457700	Potri.001G457700(AS)	POPTR_0001s46180	sp|Q9LM20|PUM8_ARATH	Putative pumilio homolog 8, chloroplastic OS=Arabidopsis thaliana GN=APUM8 PE=3 SV=2	AT1G22240.1	| Symbols: APUM8, PUM8 | pumilio 8 | chr1:7853084-7854963 FORWARD LENGTH=515	LOC_Os12g31000.1	protein|pumilio-family RNA binding repeat domain containing protein, expressed	IMGA|Medtr5g063650.1	Pumilio domain-containing protein chr5 25669388-25673667 I EGN_Mt100125 20111014	NA	GO:0003723|RNA binding	GO:0005737|cytoplasm
pt2_04769	A	A1S	Potri.001G457800	Potri.001G457800(AS)	POPTR_0001s46190	NA	NA	AT1G79090.2	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Topoisomerase II-associated protein PAT1 (InterPro:IPR019167); BEST Arabidopsis thaliana protein match is: Topoisomerase II-associated protein PAT1 (TAIR:AT3G22270.1); Has 1260 Blast hits to 1163 proteins in 186 species: Archae - 0; Bacteria - 32; Metazoa - 596; Fungi - 277; Plants - 212; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink). | chr1:29749551-29752945 REVERSE LENGTH=793	LOC_Os01g56300.1	protein|expressed protein	NA	NA	GO:0006486|protein glycosylation GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005737|cytoplasm
pt2_04770	B	B4A	Potri.002G193500	Potri.002G193500(BA) Potri.011G019400(BA) Potri.011G017300(BA) Potri.012G085400(DA)	POPTR_0001s46200	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04771	A	A1S	Potri.001G457900	Potri.001G457900(AS)	POPTR_0001s46210	sp|P37518|ENGD_BACSU	GTP-dependent nucleic acid-binding protein engD OS=Bacillus subtilis (strain 168) GN=engD PE=3 SV=1	AT1G56050.1	| Symbols: | GTP-binding protein-related | chr1:20963793-20966181 FORWARD LENGTH=421	LOC_Os03g56840.1	protein|GTP-binding protein, putative, expressed	NA	NA	GO:0006783|heme biosynthetic process GO:0008150|biological_process	GO:0005525|GTP binding	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_04772	A	A1S	Potri.001G458000	Potri.001G458000(AS)	POPTR_0001s46220	NA	NA	AT3G12955.1	| Symbols: | SAUR-like auxin-responsive protein family | chr3:4135659-4136078 REVERSE LENGTH=139	LOC_Os08g35110.1	protein|OsSAUR33 - Auxin-responsive SAUR gene family member, expressed	IMGA|contig_165881_1.1	SAUR33-auxin-responsive SAUR family member contig_165881 483-893 E PREDN 20111014	GO:0009733|response to auxin stimulus	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_04773	A	A1S	Potri.001G458100	Potri.001G458100(AS)	POPTR_0001s46230	NA	NA	AT2G13350.1	| Symbols: | Calcium-dependent lipid-binding (CaLB domain) family protein | chr2:5536525-5537730 REVERSE LENGTH=401	NA	NA	IMGA|Medtr1g073210.1	RNA-binding protein 12B chr1 18609235-18607187 H EGN_Mt100125 20111014	GO:0006944|cellular membrane fusion GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_04774	A	A2S	Potri.001G458200	Potri.001G458200(AS) Potri.011G143300(BS)	POPTR_0001s46240	sp|Q6NVR9|ATAD3_XENTR	ATPase family AAA domain-containing protein 3 OS=Xenopus tropicalis GN=atad3 PE=2 SV=1	AT3G03060.1	| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr3:692188-695424 FORWARD LENGTH=628	LOC_Os02g46990.1	protein|AAA-type ATPase family protein, putative, expressed	IMGA|Medtr5g020530.1	ATPase family AAA domain-containing protein chr5 7597350-7590260 E EGN_Mt100125 20111014	NA	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity	GO:0005739|mitochondrion GO:0005886|plasma membrane
pt2_04775	A	A1S	Potri.001G458300	Potri.001G458300(AS)	POPTR_0001s46250	NA	NA	NA	NA	NA	NA	NA	NA	GO:0000398|mRNA splicing, via spliceosome GO:0008380|RNA splicing GO:0010182|sugar mediated signaling pathway	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding GO:0005515|protein binding	GO:0005654|nucleoplasm GO:0005730|nucleolus GO:0016607|nuclear speck
pt2_04776	A	A1S	Potri.001G458400	Potri.001G458400(AS)	POPTR_0001s46260	sp|Q5BPS3|DOR_ARATH	F-box protein DOR OS=Arabidopsis thaliana GN=DOR PE=1 SV=2	AT2G31470.1	| Symbols: DOR | F-box and associated interaction domains-containing protein | chr2:13407492-13408655 REVERSE LENGTH=387	LOC_Os09g27660.3	protein|OsFBO21 - F-box and other domain containing protein, expressed	IMGA|Medtr5g011200.1	F-box/kelch-repeat protein chr5 2937583-2939621 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_04777	A	A2S	Potri.001G458500	Potri.001G458500(AS) Potri.001G458600(AA)	POPTR_0001s46270	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04778	A	A1S	Potri.001G458600	Potri.001G458600(AS)	POPTR_0001s46280	sp|Q41822|IOJAP_MAIZE	Protein Iojap OS=Zea mays GN=Ij PE=2 SV=1	AT3G12930.1	| Symbols: | Lojap-related protein | chr3:4128465-4129616 FORWARD LENGTH=238	LOC_Os09g32030.1	protein|expressed protein	NA	NA	GO:0006655|phosphatidylglycerol biosynthetic process GO:0008150|biological_process GO:0009073|aromatic amino acid family biosynthetic process GO:0010103|stomatal complex morphogenesis GO:0016226|iron-sulfur cluster assembly GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0045036|protein targeting to chloroplast	NA	GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_04779	A	A2S	Potri.001G458700	Potri.001G458700(AS) Potri.001G458900(BS)	POPTR_0001s46290	sp|Q02200|PERX_NICSY	Lignin-forming anionic peroxidase OS=Nicotiana sylvestris PE=2 SV=1	AT1G14540.1	| Symbols: | Peroxidase superfamily protein | chr1:4974233-4975600 REVERSE LENGTH=315	LOC_Os11g02130.1	protein|peroxidase precursor, putative, expressed	IMGA|Medtr5g083860.1	Peroxidase chr5 35177806-35180052 F EGN_Mt100125 20111014	GO:0006979|response to oxidative stress GO:0055114|oxidation-reduction process GO:0071456|cellular response to hypoxia	GO:0004601|peroxidase activity GO:0020037|heme binding	GO:0005576|extracellular region
pt2_04780	A	A1S	Potri.001G458800	Potri.001G458800(AS)	POPTR_0001s46300	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04781	D	D1S	Potri.002G216700	Potri.002G216700(DS)	POPTR_0001s46320	NA	NA	AT5G05800.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 881 Blast hits to 512 proteins in 30 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 38; Plants - 833; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). | chr5:1743234-1744751 REVERSE LENGTH=449	ChrUn.fgenesh.mRNA.24	protein|hypothetical protein	IMGA|Medtr5g010555.1	PIF-like transposase chr5 2609522-2605622 E EGN_Mt100125 20111014	GO:0008150|biological_process GO:0048573|photoperiodism, flowering	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_04782	A	A1S	Potri.001G459000	Potri.001G459000(AS)	POPTR_0001s46330	sp|Q9SA78|COPE1_ARATH	Coatomer subunit epsilon-1 OS=Arabidopsis thaliana GN=At1g30630 PE=2 SV=1	AT1G30630.1	| Symbols: | Coatomer epsilon subunit | chr1:10858546-10860173 REVERSE LENGTH=292	LOC_Os04g52270.2	protein|coatomer subunit epsilon, putative, expressed	NA	NA	GO:0006890|retrograde vesicle-mediated transport, Golgi to ER	GO:0005198|structural molecule activity GO:0008565|protein transporter activity	GO:0005774|vacuolar membrane GO:0030126|COPI vesicle coat
pt2_04783	A	A1S	Potri.001G459100	Potri.001G459100(AS)	POPTR_0001s46340	sp|Q9SVG4|RETOL_ARATH	Reticuline oxidase-like protein OS=Arabidopsis thaliana GN=At4g20830 PE=1 SV=2	AT4G20800.1	| Symbols: | FAD-binding Berberine family protein | chr4:11139656-11141242 FORWARD LENGTH=528	LOC_Os06g35700.1	protein|reticuline oxidase-like protein precursor, putative, expressed	IMGA|contig_175366_1.1	Tetrahydrocannabinolic acid synthase contig_175366 1256-429 H PREDN 20111014	GO:0055114|oxidation-reduction process	GO:0003824|catalytic activity GO:0008762|UDP-N-acetylmuramate dehydrogenase activity GO:0016491|oxidoreductase activity GO:0016614|oxidoreductase activity, acting on CH-OH group of donors GO:0050660|flavin adenine dinucleotide binding	GO:0005737|cytoplasm
pt2_04784	A	A1S	Potri.001G459200	Potri.001G459200(AS)	POPTR_0001s46360	sp|Q9SVG4|RETOL_ARATH	Reticuline oxidase-like protein OS=Arabidopsis thaliana GN=At4g20830 PE=1 SV=2	AT4G20800.1	| Symbols: | FAD-binding Berberine family protein | chr4:11139656-11141242 FORWARD LENGTH=528	LOC_Os06g35700.1	protein|reticuline oxidase-like protein precursor, putative, expressed	IMGA|contig_175366_1.1	Tetrahydrocannabinolic acid synthase contig_175366 1256-429 H PREDN 20111014	GO:0002679|respiratory burst involved in defense response GO:0010200|response to chitin GO:0055114|oxidation-reduction process	GO:0003824|catalytic activity GO:0008762|UDP-N-acetylmuramate dehydrogenase activity GO:0009055|electron carrier activity GO:0016491|oxidoreductase activity GO:0016614|oxidoreductase activity, acting on CH-OH group of donors GO:0050660|flavin adenine dinucleotide binding	GO:0005737|cytoplasm
pt2_04785	A	A3S	Potri.001G459300	Potri.001G459300(AS) Potri.010G081900(BS) Potri.006G261100(BS)	POPTR_0001s46370	sp|Q9LT96|Y5977_ARATH	Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1	AT1G79620.1	| Symbols: | Leucine-rich repeat protein kinase family protein | chr1:29957633-29962174 REVERSE LENGTH=971	LOC_Os12g10740.1	protein|leucine-rich repeat family protein, putative, expressed	IMGA|Medtr5g075650.1	Protein kinase-like protein chr5 31198721-31190078 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway GO:0010413|glucuronoxylan metabolic process GO:0044036|cell wall macromolecule metabolic process GO:0045492|xylan biosynthetic process	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005576|extracellular region
pt2_04786	A	A1S	Potri.001G459400	Potri.001G459400(AS)	POPTR_0001s46380	sp|Q9LT10|CXE18_ARATH	Probable carboxylesterase 18 OS=Arabidopsis thaliana GN=CXE18 PE=2 SV=1	AT5G23530.1	| Symbols: AtCXE18, CXE18 | carboxyesterase 18 | chr5:7933366-7934373 REVERSE LENGTH=335	LOC_Os07g44890.1	protein|gibberellin receptor GID1L2, putative, expressed	IMGA|Medtr1g012430.1	Arylacetamide deacetylase chr1 2909844-2908906 H EGN_Mt100125 20111014	GO:0008152|metabolic process GO:0009860|pollen tube growth	GO:0004091|carboxylesterase activity GO:0016787|hydrolase activity	GO:0005634|nucleus
pt2_04787	A	A1S	Potri.001G459500	Potri.001G459500(AS)	POPTR_0001s46390	sp|Q9SVG4|RETOL_ARATH	Reticuline oxidase-like protein OS=Arabidopsis thaliana GN=At4g20830 PE=1 SV=2	AT4G20800.1	| Symbols: | FAD-binding Berberine family protein | chr4:11139656-11141242 FORWARD LENGTH=528	LOC_Os06g35700.1	protein|reticuline oxidase-like protein precursor, putative, expressed	IMGA|contig_175366_1.1	Tetrahydrocannabinolic acid synthase contig_175366 1256-429 H PREDN 20111014	GO:0055114|oxidation-reduction process	GO:0003824|catalytic activity GO:0008762|UDP-N-acetylmuramate dehydrogenase activity GO:0016491|oxidoreductase activity GO:0016614|oxidoreductase activity, acting on CH-OH group of donors GO:0050660|flavin adenine dinucleotide binding	GO:0005737|cytoplasm
pt2_04788	A	A1S	Potri.001G459700	Potri.001G459700(AS)	POPTR_0001s46400	sp|Q9SA77|ARAE1_ARATH	UDP-arabinose 4-epimerase 1 OS=Arabidopsis thaliana GN=MUR4 PE=1 SV=1	AT1G30620.2	| Symbols: HSR8, MUR4, UXE1 | NAD(P)-binding Rossmann-fold superfamily protein | chr1:10855496-10857970 FORWARD LENGTH=419	LOC_Os07g04690.2	protein|UDP-arabinose 4-epimerase 1, putative, expressed	IMGA|Medtr5g009170.1	UDP-glucose 4-epimerase chr5 1896587-1893288 F EGN_Mt100125 20111014	GO:0006012|galactose metabolic process GO:0009225|nucleotide-sugar metabolic process GO:0009723|response to ethylene stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0019567|arabinose biosynthetic process GO:0035556|intracellular signal transduction GO:0044237|cellular metabolic process GO:0052542|defense response by callose deposition	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0003978|UDP-glucose 4-epimerase activity GO:0050373|UDP-arabinose 4-epimerase activity GO:0050662|coenzyme binding	GO:0005794|Golgi apparatus
pt2_04789	A	A1S	Potri.001G459800	Potri.001G459800(AS)	POPTR_0001s46410	NA	NA	NA	NA	NA	NA	NA	NA	GO:0009409|response to cold GO:0009631|cold acclimation GO:0032508|DNA duplex unwinding	GO:0003676|nucleic acid binding GO:0003677|DNA binding GO:0008270|zinc ion binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_04790	A	A1S	Potri.001G459900	Potri.001G459900(AS)	POPTR_0001s46420	sp|Q9SA76|PPR64_ARATH	Pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Arabidopsis thaliana GN=EMB2279 PE=2 SV=1	AT1G30610.1	| Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) repeat-containing protein | chr1:10846676-10850517 FORWARD LENGTH=1006	LOC_Os01g48380.1	protein|PPR repeat domain containing protein, putative, expressed	IMGA|Medtr5g008300.1	Pentatricopeptide repeat-containing protein chr5 1493031-1498664 E EGN_Mt100125 20111014	GO:0009793|embryo development ending in seed dormancy GO:0010098|suspensor development	NA	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_04791	A	A1S	Potri.001G460000	Potri.001G460000(AS)	POPTR_0001s46430	sp|Q8H0W2|HDA9_ARATH	Histone deacetylase 9 OS=Arabidopsis thaliana GN=HDA9 PE=2 SV=1	AT3G44680.1	| Symbols: HDA9, HDA09 | histone deacetylase 9 | chr3:16226769-16229752 REVERSE LENGTH=426	LOC_Os04g33480.1	protein|histone deacetylase, putative, expressed	NA	NA	GO:0016575|histone deacetylation	GO:0004407|histone deacetylase activity	GO:0005634|nucleus
pt2_04792	A	A1S	Potri.001G460100	Potri.001G460100(AS)	POPTR_0001s46440	sp|A4FV84|MRT4_BOVIN	mRNA turnover protein 4 homolog OS=Bos taurus GN=MRTO4 PE=2 SV=1	AT1G25260.1	| Symbols: | Ribosomal protein L10 family protein | chr1:8854163-8855766 REVERSE LENGTH=235	LOC_Os11g01420.1	protein|ribosomal protein L10, putative, expressed	NA	NA	GO:0001510|RNA methylation GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005634|nucleus GO:0005829|cytosol GO:0005840|ribosome GO:0022626|cytosolic ribosome
pt2_04793	A	A1S	Potri.001G460200	Potri.001G460200(AS)	POPTR_0001s46450	NA	NA	AT4G21105.1	| Symbols: | cytochrome-c oxidases;electron carriers | chr4:11266273-11266724 FORWARD LENGTH=68	LOC_Os07g45320.1	protein|COX VIIa, putative, expressed	NA	NA	GO:0006623|protein targeting to vacuole	GO:0004129|cytochrome-c oxidase activity GO:0009055|electron carrier activity	GO:0005739|mitochondrion GO:0005774|vacuolar membrane
pt2_04794	B	B1S	Potri.001G460300	Potri.001G460300(BS)	POPTR_0001s46460	sp|Q9LI74|CHUP1_ARATH	Protein CHUP1, chloroplastic OS=Arabidopsis thaliana GN=CHUP1 PE=1 SV=1	AT3G25690.3	| Symbols: CHUP1 | Hydroxyproline-rich glycoprotein family protein | chr3:9354061-9357757 FORWARD LENGTH=863	LOC_Os08g03560.2	protein|chloroplast unusual positioning protein, putative, expressed	IMGA|Medtr5g053270.1	Protein CHUP1 chr5 21417069-21422285 E EGN_Mt100125 20111014	GO:0006364|rRNA processing GO:0009902|chloroplast relocation GO:0010027|thylakoid membrane organization GO:0010207|photosystem II assembly GO:0019684|photosynthesis, light reaction GO:0034660|ncRNA metabolic process GO:0035304|regulation of protein dephosphorylation GO:0042793|transcription from plastid promoter GO:0045893|positive regulation of transcription, DNA-dependent	NA	GO:0005634|nucleus GO:0009507|chloroplast GO:0009707|chloroplast outer membrane
pt2_04795	A	A1S	Potri.001G460400	Potri.001G460400(AS)	POPTR_0001s46470	NA	NA	AT3G23290.2	| Symbols: LSH4 | Protein of unknown function (DUF640) | chr3:8326958-8328010 FORWARD LENGTH=195	LOC_Os10g33780.1	protein|DUF640 domain containing protein, putative, expressed	IMGA|Medtr5g072510.1	hypothetical protein chr5 29863728-29865781 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04796	A	A2S	Potri.001G460500	Potri.001G460500(AS) Potri.011G156900(DS)	POPTR_0001s46480	sp|Q99M63|SMU1_RAT	WD40 repeat-containing protein SMU1 OS=Rattus norvegicus GN=Smu1 PE=2 SV=1	AT1G73720.1	| Symbols: SMU1 | transducin family protein / WD-40 repeat family protein | chr1:27725059-27729722 FORWARD LENGTH=511	LOC_Os01g21940.1	protein|WD domain, G-beta repeat domain containing protein, expressed	NA	NA	GO:0008380|RNA splicing	GO:0000166|nucleotide binding	GO:0005634|nucleus GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_04797	A	A1S	Potri.001G460600	Potri.001G460600(AS)	POPTR_0001s46490	sp|Q9SA80|WRK14_ARATH	Probable WRKY transcription factor 14 OS=Arabidopsis thaliana GN=WRKY14 PE=2 SV=2	AT1G30650.1	| Symbols: WRKY14, ATWRKY14, AR411 | WRKY DNA-binding protein 14 | chr1:10868612-10870973 FORWARD LENGTH=430	LOC_Os04g50920.1	protein|WRKY37, expressed	IMGA|Medtr1g009380.1	WRKY transcription factor chr1 1920992-1923320 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_04798	A	A1S	Potri.001G460700	Potri.001G460700(AS)	POPTR_0001s46500	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008152|metabolic process GO:0019252|starch biosynthetic process	GO:0000166|nucleotide binding GO:0016491|oxidoreductase activity	GO:0009507|chloroplast
pt2_04799	A	A2S	Potri.001G460900	Potri.001G460900(AS) Potri.011G157400(DS)	POPTR_0001s46510	sp|P10975|NLTPC_RICCO	Non-specific lipid-transfer protein C, cotyledon-specific isoform OS=Ricinus communis PE=1 SV=2	NA	NA	NA	NA	NA	NA	GO:0006869|lipid transport GO:0010584|pollen exine formation	GO:0008289|lipid binding	GO:0005576|extracellular region GO:0009505|plant-type cell wall
pt2_04800	D	D1S	Potri.001G460900	Potri.001G460900(DS)	POPTR_0001s46520	sp|P10975|NLTPC_RICCO	Non-specific lipid-transfer protein C, cotyledon-specific isoform OS=Ricinus communis PE=1 SV=2	NA	NA	NA	NA	NA	NA	GO:0006869|lipid transport GO:0010584|pollen exine formation	GO:0008289|lipid binding	GO:0005576|extracellular region GO:0009505|plant-type cell wall
pt2_04801	A	A1S	Potri.001G461000	Potri.001G461000(AS)	POPTR_0001s46530	sp|Q9SA82|BH052_ARATH	Transcription factor bHLH52 OS=Arabidopsis thaliana GN=BHLH52 PE=2 SV=1	AT1G30670.1	| Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr1:10879311-10880188 REVERSE LENGTH=264	LOC_Os12g31430.1	protein|helix-loop-helix DNA-binding domain containing protein, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_04802	A	A2S	Potri.001G461100	Potri.001G461100(AS) Potri.011G157800(BS)	POPTR_0001s46540	sp|O64885|BCCIP_ARATH	Protein BCCIP homolog OS=Arabidopsis thaliana GN=At2g44510 PE=1 SV=2	AT2G44510.1	| Symbols: | CDK inhibitor P21 binding protein | chr2:18377411-18379030 FORWARD LENGTH=326	LOC_Os03g63690.1	protein|BCCIP, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005730|nucleolus GO:0009507|chloroplast
pt2_04803	A	A1S	Potri.001G461200	Potri.001G461200(AS)	POPTR_0001s46550	NA	NA	AT1G30680.1	| Symbols: | toprim domain-containing protein | chr1:10881665-10886060 FORWARD LENGTH=709	LOC_Os06g45980.1	protein|toprim domain-containing protein, putative, expressed	IMGA|Medtr5g099220.1	hypothetical protein chr5 42455688-42461500 H EGN_Mt100125 20111014	GO:0006260|DNA replication	GO:0003678|DNA helicase activity GO:0005524|ATP binding	GO:0005739|mitochondrion
pt2_04804	A	A1S	Potri.001G461300	Potri.001G461300(AS)	POPTR_0001s46560	NA	NA	AT1G30680.1	| Symbols: | toprim domain-containing protein | chr1:10881665-10886060 FORWARD LENGTH=709	LOC_Os06g45980.1	protein|toprim domain-containing protein, putative, expressed	IMGA|Medtr5g099220.1	hypothetical protein chr5 42455688-42461500 H EGN_Mt100125 20111014	GO:0006260|DNA replication	GO:0003678|DNA helicase activity GO:0005524|ATP binding	GO:0005739|mitochondrion
pt2_04805	A	A1S	Potri.001G461400	Potri.001G461400(AS)	POPTR_0001s46570	sp|Q94C59|PATL4_ARATH	Patellin-4 OS=Arabidopsis thaliana GN=PATL4 PE=1 SV=2	AT1G30690.2	| Symbols: | Sec14p-like phosphatidylinositol transfer family protein | chr1:10888284-10890085 FORWARD LENGTH=540	LOC_Os06g45990.2	protein|patellin-5, putative, expressed	NA	NA	GO:0006810|transport GO:0016126|sterol biosynthetic process GO:0052541|plant-type cell wall cellulose metabolic process GO:0052546|cell wall pectin metabolic process	GO:0005215|transporter activity	GO:0005622|intracellular GO:0005634|nucleus GO:0005829|cytosol GO:0005886|plasma membrane GO:0016021|integral to membrane
pt2_04806	A	A4S	Potri.001G461500	Potri.001G461500(AS) Potri.001G462100(BS) Potri.001G461800(BS) Potri.001G462000(DS)	POPTR_0001s46580	sp|Q9SVG4|RETOL_ARATH	Reticuline oxidase-like protein OS=Arabidopsis thaliana GN=At4g20830 PE=1 SV=2	AT4G20820.1	| Symbols: | FAD-binding Berberine family protein | chr4:11150160-11151758 FORWARD LENGTH=532	LOC_Os06g35590.1	protein|reticuline oxidase-like protein precursor, putative, expressed	IMGA|contig_77107_1.1	(S)-reticuline oxidase-like protein contig_77107 1833-1018 H PREDN 20111014	GO:0055114|oxidation-reduction process	GO:0003824|catalytic activity GO:0008762|UDP-N-acetylmuramate dehydrogenase activity GO:0009055|electron carrier activity GO:0016491|oxidoreductase activity GO:0016614|oxidoreductase activity, acting on CH-OH group of donors GO:0050660|flavin adenine dinucleotide binding	GO:0009507|chloroplast
pt2_04807	A	A1S	Potri.001G461600	Potri.001G461600(AS)	POPTR_0001s46590	sp|Q9SVG4|RETOL_ARATH	Reticuline oxidase-like protein OS=Arabidopsis thaliana GN=At4g20830 PE=1 SV=2	AT5G44380.1	| Symbols: | FAD-binding Berberine family protein | chr5:17878873-17881369 REVERSE LENGTH=541	LOC_Os06g35550.1	protein|retrotransposon protein, putative, Ty1-copia subclass, expressed	IMGA|contig_77107_1.1	(S)-reticuline oxidase-like protein contig_77107 1833-1018 H PREDN 20111014	GO:0006979|response to oxidative stress GO:0010167|response to nitrate GO:0015706|nitrate transport GO:0055114|oxidation-reduction process	GO:0003824|catalytic activity GO:0008762|UDP-N-acetylmuramate dehydrogenase activity GO:0009055|electron carrier activity GO:0016491|oxidoreductase activity GO:0016614|oxidoreductase activity, acting on CH-OH group of donors GO:0050660|flavin adenine dinucleotide binding	GO:0005618|cell wall GO:0005737|cytoplasm GO:0009506|plasmodesma
pt2_04808	A	A2S	Potri.001G461700	Potri.001G461700(AS) Potri.001G461900(BS)	POPTR_0001s46600	sp|Q9SVG4|RETOL_ARATH	Reticuline oxidase-like protein OS=Arabidopsis thaliana GN=At4g20830 PE=1 SV=2	AT4G20820.1	| Symbols: | FAD-binding Berberine family protein | chr4:11150160-11151758 FORWARD LENGTH=532	LOC_Os06g35590.1	protein|reticuline oxidase-like protein precursor, putative, expressed	IMGA|contig_77107_1.1	(S)-reticuline oxidase-like protein contig_77107 1833-1018 H PREDN 20111014	GO:0055114|oxidation-reduction process	GO:0003824|catalytic activity GO:0008762|UDP-N-acetylmuramate dehydrogenase activity GO:0009055|electron carrier activity GO:0016491|oxidoreductase activity GO:0016614|oxidoreductase activity, acting on CH-OH group of donors GO:0050660|flavin adenine dinucleotide binding	GO:0009507|chloroplast
pt2_04809	A	A4S	Potri.001G461800	Potri.001G461800(AS) Potri.001G462100(BS) Potri.001G461500(BS) Potri.001G462000(DS)	POPTR_0001s46610	sp|Q9SVG4|RETOL_ARATH	Reticuline oxidase-like protein OS=Arabidopsis thaliana GN=At4g20830 PE=1 SV=2	AT5G44440.1	| Symbols: | FAD-binding Berberine family protein | chr5:17910694-17912295 REVERSE LENGTH=533	LOC_Os06g35590.1	protein|reticuline oxidase-like protein precursor, putative, expressed	IMGA|contig_77107_1.1	(S)-reticuline oxidase-like protein contig_77107 1833-1018 H PREDN 20111014	GO:0055114|oxidation-reduction process	GO:0003824|catalytic activity GO:0008762|UDP-N-acetylmuramate dehydrogenase activity GO:0009055|electron carrier activity GO:0016491|oxidoreductase activity GO:0016614|oxidoreductase activity, acting on CH-OH group of donors GO:0050660|flavin adenine dinucleotide binding	GO:0009507|chloroplast
pt2_04810	G	G2	NA	NA	POPTR_0001s46630	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04811	A	A4S	Potri.001G462000	Potri.001G462000(AS) Potri.001G462100(DS) Potri.001G461800(DS) Potri.001G461500(DS)	POPTR_0001s46640	sp|Q9SVG4|RETOL_ARATH	Reticuline oxidase-like protein OS=Arabidopsis thaliana GN=At4g20830 PE=1 SV=2	AT5G44440.1	| Symbols: | FAD-binding Berberine family protein | chr5:17910694-17912295 REVERSE LENGTH=533	LOC_Os06g35590.1	protein|reticuline oxidase-like protein precursor, putative, expressed	IMGA|contig_77107_1.1	(S)-reticuline oxidase-like protein contig_77107 1833-1018 H PREDN 20111014	GO:0055114|oxidation-reduction process	GO:0003824|catalytic activity GO:0008762|UDP-N-acetylmuramate dehydrogenase activity GO:0009055|electron carrier activity GO:0016491|oxidoreductase activity GO:0016614|oxidoreductase activity, acting on CH-OH group of donors GO:0050660|flavin adenine dinucleotide binding	GO:0009507|chloroplast
pt2_04812	A	A4S	Potri.001G462100	Potri.001G462100(AS) Potri.001G461800(BS) Potri.001G461500(BS) Potri.001G462000(DS)	POPTR_0001s46650	sp|Q9SVG4|RETOL_ARATH	Reticuline oxidase-like protein OS=Arabidopsis thaliana GN=At4g20830 PE=1 SV=2	AT4G20820.1	| Symbols: | FAD-binding Berberine family protein | chr4:11150160-11151758 FORWARD LENGTH=532	LOC_Os06g35590.1	protein|reticuline oxidase-like protein precursor, putative, expressed	IMGA|contig_77107_1.1	(S)-reticuline oxidase-like protein contig_77107 1833-1018 H PREDN 20111014	GO:0055114|oxidation-reduction process	GO:0003824|catalytic activity GO:0008762|UDP-N-acetylmuramate dehydrogenase activity GO:0009055|electron carrier activity GO:0016491|oxidoreductase activity GO:0016614|oxidoreductase activity, acting on CH-OH group of donors GO:0050660|flavin adenine dinucleotide binding	GO:0009507|chloroplast
pt2_04813	A	A3S	Potri.001G462200	Potri.001G462200(AS) Potri.001G462400(BS) Potri.001G462300(BS)	POPTR_0001s46660	sp|Q9SVG4|RETOL_ARATH	Reticuline oxidase-like protein OS=Arabidopsis thaliana GN=At4g20830 PE=1 SV=2	AT1G30700.1	| Symbols: | FAD-binding Berberine family protein | chr1:10892623-10894437 FORWARD LENGTH=527	LOC_Os06g35590.1	protein|reticuline oxidase-like protein precursor, putative, expressed	IMGA|contig_77107_1.1	(S)-reticuline oxidase-like protein contig_77107 1833-1018 H PREDN 20111014	GO:0006865|amino acid transport GO:0009407|toxin catabolic process GO:0010583|response to cyclopentenone GO:0055114|oxidation-reduction process	GO:0003824|catalytic activity GO:0008762|UDP-N-acetylmuramate dehydrogenase activity GO:0009055|electron carrier activity GO:0016491|oxidoreductase activity GO:0016614|oxidoreductase activity, acting on CH-OH group of donors GO:0050660|flavin adenine dinucleotide binding	GO:0009507|chloroplast
pt2_04814	A	A3S	Potri.001G462300	Potri.001G462300(AS) Potri.001G462200(BS) Potri.001G462400(DS)	POPTR_0001s46670	sp|Q9SVG4|RETOL_ARATH	Reticuline oxidase-like protein OS=Arabidopsis thaliana GN=At4g20830 PE=1 SV=2	AT1G30700.1	| Symbols: | FAD-binding Berberine family protein | chr1:10892623-10894437 FORWARD LENGTH=527	LOC_Os06g35660.1	protein|reticuline oxidase-like protein precursor, putative, expressed	IMGA|contig_77107_1.1	(S)-reticuline oxidase-like protein contig_77107 1833-1018 H PREDN 20111014	GO:0006865|amino acid transport GO:0009407|toxin catabolic process GO:0010583|response to cyclopentenone GO:0055114|oxidation-reduction process	GO:0003824|catalytic activity GO:0008762|UDP-N-acetylmuramate dehydrogenase activity GO:0009055|electron carrier activity GO:0016491|oxidoreductase activity GO:0016614|oxidoreductase activity, acting on CH-OH group of donors GO:0050660|flavin adenine dinucleotide binding	GO:0009507|chloroplast
pt2_04815	A	A3S	Potri.001G462500	Potri.001G462500(AS) Potri.001G462400(BS) Potri.001G462200(DS)	POPTR_0001s46680	sp|Q9SVG4|RETOL_ARATH	Reticuline oxidase-like protein OS=Arabidopsis thaliana GN=At4g20830 PE=1 SV=2	AT1G30700.1	| Symbols: | FAD-binding Berberine family protein | chr1:10892623-10894437 FORWARD LENGTH=527	LOC_Os06g35700.1	protein|reticuline oxidase-like protein precursor, putative, expressed	IMGA|contig_77107_1.1	(S)-reticuline oxidase-like protein contig_77107 1833-1018 H PREDN 20111014	GO:0006865|amino acid transport GO:0009407|toxin catabolic process GO:0010583|response to cyclopentenone GO:0055114|oxidation-reduction process	GO:0003824|catalytic activity GO:0008762|UDP-N-acetylmuramate dehydrogenase activity GO:0009055|electron carrier activity GO:0016491|oxidoreductase activity GO:0016614|oxidoreductase activity, acting on CH-OH group of donors GO:0050660|flavin adenine dinucleotide binding	GO:0009507|chloroplast
pt2_04816	A	A1S	Potri.001G462600	Potri.001G462600(AS)	POPTR_0001s46690	sp|Q9SVG4|RETOL_ARATH	Reticuline oxidase-like protein OS=Arabidopsis thaliana GN=At4g20830 PE=1 SV=2	AT1G01980.1	| Symbols: | FAD-binding Berberine family protein | chr1:340374-341999 REVERSE LENGTH=541	LOC_Os06g35700.1	protein|reticuline oxidase-like protein precursor, putative, expressed	IMGA|contig_77107_1.1	(S)-reticuline oxidase-like protein contig_77107 1833-1018 H PREDN 20111014	GO:0055114|oxidation-reduction process	GO:0003824|catalytic activity GO:0008762|UDP-N-acetylmuramate dehydrogenase activity GO:0009055|electron carrier activity GO:0016491|oxidoreductase activity GO:0016614|oxidoreductase activity, acting on CH-OH group of donors GO:0050660|flavin adenine dinucleotide binding	GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_04817	A	A1S	Potri.001G462600	Potri.001G462600(AS)	POPTR_0001s46690	sp|Q9SVG4|RETOL_ARATH	Reticuline oxidase-like protein OS=Arabidopsis thaliana GN=At4g20830 PE=1 SV=2	AT1G01980.1	| Symbols: | FAD-binding Berberine family protein | chr1:340374-341999 REVERSE LENGTH=541	LOC_Os06g35700.1	protein|reticuline oxidase-like protein precursor, putative, expressed	IMGA|contig_77107_1.1	(S)-reticuline oxidase-like protein contig_77107 1833-1018 H PREDN 20111014	GO:0055114|oxidation-reduction process	GO:0003824|catalytic activity GO:0008762|UDP-N-acetylmuramate dehydrogenase activity GO:0009055|electron carrier activity GO:0016491|oxidoreductase activity GO:0016614|oxidoreductase activity, acting on CH-OH group of donors GO:0050660|flavin adenine dinucleotide binding	GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_04818	A	A1S	Potri.001G462600	Potri.001G462600(AS)	POPTR_0001s46690	sp|Q9SVG4|RETOL_ARATH	Reticuline oxidase-like protein OS=Arabidopsis thaliana GN=At4g20830 PE=1 SV=2	AT1G01980.1	| Symbols: | FAD-binding Berberine family protein | chr1:340374-341999 REVERSE LENGTH=541	LOC_Os06g35700.1	protein|reticuline oxidase-like protein precursor, putative, expressed	IMGA|contig_77107_1.1	(S)-reticuline oxidase-like protein contig_77107 1833-1018 H PREDN 20111014	GO:0055114|oxidation-reduction process	GO:0003824|catalytic activity GO:0008762|UDP-N-acetylmuramate dehydrogenase activity GO:0009055|electron carrier activity GO:0016491|oxidoreductase activity GO:0016614|oxidoreductase activity, acting on CH-OH group of donors GO:0050660|flavin adenine dinucleotide binding	GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_04819	A	A2S	Potri.001G462700	Potri.001G462700(AS) Potri.011G158600(BS)	POPTR_0001s46700	sp|Q9SVG4|RETOL_ARATH	Reticuline oxidase-like protein OS=Arabidopsis thaliana GN=At4g20830 PE=1 SV=2	AT1G30760.1	| Symbols: | FAD-binding Berberine family protein | chr1:10918321-10920441 FORWARD LENGTH=534	LOC_Os06g35650.1	protein|reticuline oxidase-like protein precursor, putative, expressed	IMGA|contig_77107_1.1	(S)-reticuline oxidase-like protein contig_77107 1833-1018 H PREDN 20111014	GO:0055114|oxidation-reduction process	GO:0003824|catalytic activity GO:0008762|UDP-N-acetylmuramate dehydrogenase activity GO:0009055|electron carrier activity GO:0016491|oxidoreductase activity GO:0016614|oxidoreductase activity, acting on CH-OH group of donors GO:0050660|flavin adenine dinucleotide binding	GO:0005618|cell wall GO:0005737|cytoplasm GO:0009506|plasmodesma
pt2_04820	A	A1S	Potri.001G462800	Potri.001G462800(AS)	POPTR_0001s46710	sp|Q9SVG4|RETOL_ARATH	Reticuline oxidase-like protein OS=Arabidopsis thaliana GN=At4g20830 PE=1 SV=2	AT1G30760.1	| Symbols: | FAD-binding Berberine family protein | chr1:10918321-10920441 FORWARD LENGTH=534	LOC_Os06g35560.1	protein|reticuline oxidase-like protein precursor, putative, expressed	IMGA|contig_77107_1.1	(S)-reticuline oxidase-like protein contig_77107 1833-1018 H PREDN 20111014	GO:0007155|cell adhesion GO:0009793|embryo development ending in seed dormancy GO:0010090|trichome morphogenesis GO:0010197|polar nucleus fusion GO:0045010|actin nucleation GO:0048765|root hair cell differentiation GO:0055114|oxidation-reduction process GO:0071555|cell wall organization	GO:0003824|catalytic activity GO:0008762|UDP-N-acetylmuramate dehydrogenase activity GO:0009055|electron carrier activity GO:0016491|oxidoreductase activity GO:0016614|oxidoreductase activity, acting on CH-OH group of donors GO:0050660|flavin adenine dinucleotide binding	GO:0005618|cell wall GO:0009506|plasmodesma
pt2_04821	G	G1	NA	NA	POPTR_0001s46720	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04822	A	A1S	Potri.001G463000	Potri.001G463000(AS)	POPTR_0001s46730	sp|Q94AJ5|PGLR5_ARATH	Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana GN=At1g80170 PE=1 SV=1	AT1G23460.1	| Symbols: | Pectin lyase-like superfamily protein | chr1:8327382-8329622 FORWARD LENGTH=460	LOC_Os02g03750.1	protein|polygalacturonase, putative, expressed	IMGA|contig_51869_1.1	Polygalacturonase contig_51869 1653-425 H PREDN 20111014	GO:0005975|carbohydrate metabolic process GO:0009887|organ morphogenesis GO:0009888|tissue development GO:0010413|glucuronoxylan metabolic process GO:0010638|positive regulation of organelle organization GO:0033044|regulation of chromosome organization GO:0044036|cell wall macromolecule metabolic process GO:0045492|xylan biosynthetic process	GO:0004650|polygalacturonase activity	NA
pt2_04823	A	A1S	Potri.001G463100	Potri.001G463100(AS)	POPTR_0001s46740	sp|Q9SVG4|RETOL_ARATH	Reticuline oxidase-like protein OS=Arabidopsis thaliana GN=At4g20830 PE=1 SV=2	AT1G30760.1	| Symbols: | FAD-binding Berberine family protein | chr1:10918321-10920441 FORWARD LENGTH=534	LOC_Os06g35560.1	protein|reticuline oxidase-like protein precursor, putative, expressed	IMGA|contig_77107_1.1	(S)-reticuline oxidase-like protein contig_77107 1833-1018 H PREDN 20111014	GO:0007155|cell adhesion GO:0009793|embryo development ending in seed dormancy GO:0010090|trichome morphogenesis GO:0010197|polar nucleus fusion GO:0045010|actin nucleation GO:0048765|root hair cell differentiation GO:0055114|oxidation-reduction process GO:0071555|cell wall organization	GO:0003824|catalytic activity GO:0008762|UDP-N-acetylmuramate dehydrogenase activity GO:0009055|electron carrier activity GO:0016491|oxidoreductase activity GO:0016614|oxidoreductase activity, acting on CH-OH group of donors GO:0050660|flavin adenine dinucleotide binding	GO:0005618|cell wall GO:0009506|plasmodesma
pt2_04824	A	A1S	Potri.001G463200	Potri.001G463200(AS)	POPTR_0001s46750	NA	NA	AT3G26710.1	| Symbols: CCB1 | cofactor assembly of complex C | chr3:9813550-9814606 FORWARD LENGTH=267	LOC_Os11g32320.1	protein|CCB1, putative, expressed	NA	NA	GO:0006364|rRNA processing GO:0009657|plastid organization GO:0010027|thylakoid membrane organization GO:0010190|cytochrome b6f complex assembly GO:0010207|photosystem II assembly GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_04825	A	A1S	Potri.001G463200	Potri.001G463200(AS)	POPTR_0001s46750	NA	NA	AT3G26710.1	| Symbols: CCB1 | cofactor assembly of complex C | chr3:9813550-9814606 FORWARD LENGTH=267	LOC_Os11g32320.1	protein|CCB1, putative, expressed	NA	NA	GO:0006364|rRNA processing GO:0009657|plastid organization GO:0010027|thylakoid membrane organization GO:0010190|cytochrome b6f complex assembly GO:0010207|photosystem II assembly GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_04826	A	A1S	Potri.001G463200	Potri.001G463200(AS)	POPTR_0001s46750	NA	NA	AT3G26710.1	| Symbols: CCB1 | cofactor assembly of complex C | chr3:9813550-9814606 FORWARD LENGTH=267	LOC_Os11g32320.1	protein|CCB1, putative, expressed	NA	NA	GO:0006364|rRNA processing GO:0009657|plastid organization GO:0010027|thylakoid membrane organization GO:0010190|cytochrome b6f complex assembly GO:0010207|photosystem II assembly GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_04827	A	A1S	Potri.001G463300	Potri.001G463300(AS)	POPTR_0001s46760	sp|Q9SVG4|RETOL_ARATH	Reticuline oxidase-like protein OS=Arabidopsis thaliana GN=At4g20830 PE=1 SV=2	AT1G30760.1	| Symbols: | FAD-binding Berberine family protein | chr1:10918321-10920441 FORWARD LENGTH=534	LOC_Os06g35700.1	protein|reticuline oxidase-like protein precursor, putative, expressed	IMGA|contig_175366_1.1	Tetrahydrocannabinolic acid synthase contig_175366 1256-429 H PREDN 20111014	GO:0007155|cell adhesion GO:0009793|embryo development ending in seed dormancy GO:0010090|trichome morphogenesis GO:0010197|polar nucleus fusion GO:0045010|actin nucleation GO:0048765|root hair cell differentiation GO:0055114|oxidation-reduction process GO:0071555|cell wall organization	GO:0003824|catalytic activity GO:0008762|UDP-N-acetylmuramate dehydrogenase activity GO:0009055|electron carrier activity GO:0016491|oxidoreductase activity GO:0016614|oxidoreductase activity, acting on CH-OH group of donors GO:0050660|flavin adenine dinucleotide binding	GO:0005618|cell wall GO:0009506|plasmodesma
pt2_04828	A	A7S	Potri.001G463400	Potri.001G463400(AS) Potri.011G160200(DS) Potri.011G160400(DS) Potri.011G159200(DS) Potri.011G160300(DS) Potri.011G159300(DS) Potri.011G159100(DS)	POPTR_0001s46770	sp|Q9SVG4|RETOL_ARATH	Reticuline oxidase-like protein OS=Arabidopsis thaliana GN=At4g20830 PE=1 SV=2	AT1G30760.1	| Symbols: | FAD-binding Berberine family protein | chr1:10918321-10920441 FORWARD LENGTH=534	LOC_Os06g35560.1	protein|reticuline oxidase-like protein precursor, putative, expressed	IMGA|contig_77107_1.1	(S)-reticuline oxidase-like protein contig_77107 1833-1018 H PREDN 20111014	GO:0055114|oxidation-reduction process	GO:0003824|catalytic activity GO:0008762|UDP-N-acetylmuramate dehydrogenase activity GO:0009055|electron carrier activity GO:0016491|oxidoreductase activity GO:0016614|oxidoreductase activity, acting on CH-OH group of donors GO:0050660|flavin adenine dinucleotide binding	GO:0005618|cell wall GO:0005737|cytoplasm GO:0009506|plasmodesma
pt2_04829	A	A3S	Potri.001G463500	Potri.001G463500(AS) Potri.001G463300(DS) Potri.011G158900(DA)	POPTR_0001s46780	sp|Q9SVG4|RETOL_ARATH	Reticuline oxidase-like protein OS=Arabidopsis thaliana GN=At4g20830 PE=1 SV=2	AT1G30760.1	| Symbols: | FAD-binding Berberine family protein | chr1:10918321-10920441 FORWARD LENGTH=534	LOC_Os06g35650.1	protein|reticuline oxidase-like protein precursor, putative, expressed	NA	NA	GO:0055114|oxidation-reduction process	GO:0003824|catalytic activity GO:0008762|UDP-N-acetylmuramate dehydrogenase activity GO:0009055|electron carrier activity GO:0016491|oxidoreductase activity GO:0016614|oxidoreductase activity, acting on CH-OH group of donors GO:0050660|flavin adenine dinucleotide binding	GO:0005618|cell wall GO:0005737|cytoplasm GO:0009506|plasmodesma
pt2_04830	A	A1S	Potri.001G463600	Potri.001G463600(AS)	POPTR_0001s46790	sp|Q9SVG4|RETOL_ARATH	Reticuline oxidase-like protein OS=Arabidopsis thaliana GN=At4g20830 PE=1 SV=2	AT4G20860.1	| Symbols: | FAD-binding Berberine family protein | chr4:11172726-11174318 FORWARD LENGTH=530	LOC_Os06g35550.1	protein|retrotransposon protein, putative, Ty1-copia subclass, expressed	IMGA|contig_77107_1.1	(S)-reticuline oxidase-like protein contig_77107 1833-1018 H PREDN 20111014	GO:0002679|respiratory burst involved in defense response GO:0006865|amino acid transport GO:0009407|toxin catabolic process GO:0010167|response to nitrate GO:0010200|response to chitin GO:0010583|response to cyclopentenone GO:0015706|nitrate transport GO:0015824|proline transport GO:0055114|oxidation-reduction process	GO:0003824|catalytic activity GO:0008762|UDP-N-acetylmuramate dehydrogenase activity GO:0009055|electron carrier activity GO:0016491|oxidoreductase activity GO:0016614|oxidoreductase activity, acting on CH-OH group of donors GO:0050660|flavin adenine dinucleotide binding	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_04831	A	A1S	Potri.001G463700	Potri.001G463700(AS)	POPTR_0001s46800	NA	NA	AT2G34780.2	| Symbols: MEE22 | maternal effect embryo arrest 22 | chr2:14669201-14673607 FORWARD LENGTH=1236	LOC_Os01g56290.1	protein|expressed protein	IMGA|Medtr5g090200.1	hypothetical protein chr5 38254490-38259024 E EGN_Mt100125 20111014	GO:0006312|mitotic recombination GO:0006342|chromatin silencing GO:0006406|mRNA export from nucleus GO:0007062|sister chromatid cohesion GO:0009560|embryo sac egg cell differentiation GO:0009640|photomorphogenesis GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009855|determination of bilateral symmetry GO:0009880|embryonic pattern specification GO:0009909|regulation of flower development GO:0009933|meristem structural organization GO:0010014|meristem initiation GO:0010072|primary shoot apical meristem specification GO:0010073|meristem maintenance GO:0010074|maintenance of meristem identity GO:0010162|seed dormancy process GO:0010182|sugar mediated signaling pathway GO:0010228|vegetative to reproductive phase transition of meristem GO:0010431|seed maturation GO:0010564|regulation of cell cycle process GO:0016567|protein ubiquitination GO:0016569|covalent chromatin modification GO:0019915|lipid storage GO:0031047|gene silencing by RNA GO:0032876|negative regulation of DNA endoreduplication GO:0045595|regulation of cell differentiation GO:0048366|leaf development GO:0048825|cotyledon development GO:0050826|response to freezing	NA	GO:0005737|cytoplasm
pt2_04832	A	A1S	Potri.001G463800	Potri.001G463800(AS)	POPTR_0001s46810	sp|Q2LAM0|FA2H_RAT	Fatty acid 2-hydroxylase OS=Rattus norvegicus GN=Fa2h PE=1 SV=2	AT2G34770.1	| Symbols: FAH1, ATFAH1 | fatty acid hydroxylase 1 | chr2:14666776-14668061 FORWARD LENGTH=237	LOC_Os03g56820.1	protein|fatty acid hydroxylase, putative, expressed	NA	NA	GO:0000038|very long-chain fatty acid metabolic process GO:0006633|fatty acid biosynthetic process GO:0006891|intra-Golgi vesicle-mediated transport GO:0006944|cellular membrane fusion GO:0043069|negative regulation of programmed cell death GO:0055114|oxidation-reduction process	GO:0003824|catalytic activity GO:0005506|iron ion binding GO:0016491|oxidoreductase activity GO:0080132|fatty acid alpha-hydroxylase activity	NA
pt2_04833	A	A1S	Potri.001G463900	Potri.001G463900(AS)	POPTR_0001s46820	sp|Q3E7I6|GDL11_ARATH	GDSL esterase/lipase At1g28650 OS=Arabidopsis thaliana GN=At1g28650 PE=2 SV=1	AT1G28650.1	| Symbols: | GDSL-like Lipase/Acylhydrolase superfamily protein | chr1:10069547-10071082 REVERSE LENGTH=385	LOC_Os11g31940.1	protein|GDSL-like lipase/acylhydrolase, putative, expressed	IMGA|Medtr1g030220.1	Early nodulin chr1 8769562-8773292 E EGN_Mt100125 20111014	GO:0006629|lipid metabolic process	GO:0004091|carboxylesterase activity GO:0016788|hydrolase activity, acting on ester bonds	GO:0005576|extracellular region GO:0005618|cell wall
pt2_04834	A	A1S	Potri.001G464000	Potri.001G464000(AS)	POPTR_0001s46830	sp|Q6K5Q0|GL21_ORYSJ	Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica GN=Os02g0491600 PE=3 SV=1	AT5G39190.1	| Symbols: GLP2A, ATGER2, GER2 | germin-like protein 2 | chr5:15692771-15693546 REVERSE LENGTH=222	LOC_Os02g29000.1	protein|Cupin domain containing protein, expressed	IMGA|Medtr5g046430.1	Germin-like protein subfamily 1 member chr5 19943146-19942223 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0030145|manganese ion binding GO:0045735|nutrient reservoir activity	GO:0005576|extracellular region GO:0048046|apoplast
pt2_04835	A	A1S	Potri.001G464100	Potri.001G464100(AS)	POPTR_0001s46840	sp|Q6K5P8|GL23_ORYSJ	Putative germin-like protein 2-3 OS=Oryza sativa subsp. japonica GN=Os02g0491800 PE=3 SV=1	AT5G39190.1	| Symbols: GLP2A, ATGER2, GER2 | germin-like protein 2 | chr5:15692771-15693546 REVERSE LENGTH=222	LOC_Os02g29020.1	protein|Cupin domain containing protein, expressed	IMGA|Medtr5g046430.1	Germin-like protein subfamily 1 member chr5 19943146-19942223 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0030145|manganese ion binding GO:0045735|nutrient reservoir activity	GO:0005576|extracellular region GO:0048046|apoplast
pt2_04836	A	A1S	Potri.001G464200	Potri.001G464200(AS)	POPTR_0001s46850	sp|Q9LSB8|PP235_ARATH	Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2	AT3G15930.1	| Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr3:5387444-5389690 FORWARD LENGTH=687	LOC_Os10g26070.1	protein|pentatricopeptide, putative, expressed	IMGA|contig_125852_1.1	Pentatricopeptide repeat protein contig_125852 1436-3821 E PREDN 20111014	GO:0031425|chloroplast RNA processing	NA	GO:0009507|chloroplast
pt2_04837	A	A1S	Potri.001G464300	Potri.001G464300(AS)	POPTR_0001s46860	NA	NA	AT4G20880.1	| Symbols: | ethylene-responsive nuclear protein / ethylene-regulated nuclear protein (ERT2) | chr4:11179389-11180606 REVERSE LENGTH=405	NA	NA	IMGA|contig_53526_1.1	Ethylene-regulated nuclear protein ERT2-like protein contig_53526 618-2551 E PREDN 20111014	NA	NA	GO:0005634|nucleus
pt2_04838	A	A1S	Potri.001G464400	Potri.001G464400(AS)	POPTR_0001s46870	sp|Q40665|TBB3_ORYSJ	Tubulin beta-3 chain OS=Oryza sativa subsp. japonica GN=TUBB3 PE=2 SV=2	AT5G62700.1	| Symbols: TUB3 | tubulin beta chain 3 | chr5:25184501-25186426 FORWARD LENGTH=450	LOC_Os06g46000.1	protein|tubulin/FtsZ domain containing protein, putative, expressed	IMGA|contig_53526_2.1	Tubulin beta chain contig_53526 5156-2874 H PREDN 20111014	GO:0006184|GTP catabolic process GO:0009409|response to cold GO:0009651|response to salt stress GO:0046686|response to cadmium ion GO:0051258|protein polymerization	GO:0003924|GTPase activity GO:0005198|structural molecule activity GO:0005525|GTP binding	GO:0005618|cell wall GO:0005730|nucleolus GO:0005737|cytoplasm GO:0005794|Golgi apparatus GO:0005874|microtubule GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0043234|protein complex GO:0045298|tubulin complex
pt2_04839	A	A1S	Potri.001G464500	Potri.001G464500(AS)	POPTR_0001s46880	sp|Q6K5P9|GL22_ORYSJ	Putative germin-like protein 2-2 OS=Oryza sativa subsp. japonica GN=Os02g0491700 PE=3 SV=1	AT5G39190.1	| Symbols: GLP2A, ATGER2, GER2 | germin-like protein 2 | chr5:15692771-15693546 REVERSE LENGTH=222	LOC_Os02g29000.1	protein|Cupin domain containing protein, expressed	IMGA|Medtr5g046430.1	Germin-like protein subfamily 1 member chr5 19943146-19942223 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0030145|manganese ion binding GO:0045735|nutrient reservoir activity	GO:0005576|extracellular region GO:0031012|extracellular matrix GO:0048046|apoplast
pt2_04840	C	C1S	Potri.001G464600	Potri.001G464600(CS)	sp|Q6K5P9|GL22_ORYSJ	Putative germin-like protein 2-2 OS=Oryza sativa subsp. japonica GN=Os02g0491700 PE=3 SV=1	NA	NA	LOC_Os02g29020.1	protein|Cupin domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0030145|manganese ion binding GO:0045735|nutrient reservoir activity	GO:0005576|extracellular region GO:0048046|apoplast
pt2_04841	A	A1S	Potri.001G464700	Potri.001G464700(AS)	POPTR_0001s46900	sp|Q9SVG4|RETOL_ARATH	Reticuline oxidase-like protein OS=Arabidopsis thaliana GN=At4g20830 PE=1 SV=2	AT5G44440.1	| Symbols: | FAD-binding Berberine family protein | chr5:17910694-17912295 REVERSE LENGTH=533	LOC_Os06g35590.1	protein|reticuline oxidase-like protein precursor, putative, expressed	IMGA|contig_77107_1.1	(S)-reticuline oxidase-like protein contig_77107 1833-1018 H PREDN 20111014	GO:0055114|oxidation-reduction process	GO:0003824|catalytic activity GO:0008762|UDP-N-acetylmuramate dehydrogenase activity GO:0009055|electron carrier activity GO:0016491|oxidoreductase activity GO:0016614|oxidoreductase activity, acting on CH-OH group of donors GO:0050660|flavin adenine dinucleotide binding	GO:0009507|chloroplast
pt2_04842	A	A2S	Potri.001G464800	Potri.001G464800(AS) Potri.011G162900(DS)	POPTR_0001s46910	sp|Q9SVG4|RETOL_ARATH	Reticuline oxidase-like protein OS=Arabidopsis thaliana GN=At4g20830 PE=1 SV=2	AT4G20820.1	| Symbols: | FAD-binding Berberine family protein | chr4:11150160-11151758 FORWARD LENGTH=532	LOC_Os06g35590.1	protein|reticuline oxidase-like protein precursor, putative, expressed	IMGA|contig_77107_1.1	(S)-reticuline oxidase-like protein contig_77107 1833-1018 H PREDN 20111014	GO:0055114|oxidation-reduction process	GO:0003824|catalytic activity GO:0008762|UDP-N-acetylmuramate dehydrogenase activity GO:0009055|electron carrier activity GO:0016491|oxidoreductase activity GO:0016614|oxidoreductase activity, acting on CH-OH group of donors GO:0050660|flavin adenine dinucleotide binding	GO:0009507|chloroplast
pt2_04843	A	A1S	Potri.001G464900	Potri.001G464900(AS)	POPTR_0001s46920	sp|Q9LU15|AHP4_ARATH	Histidine-containing phosphotransfer protein 4 OS=Arabidopsis thaliana GN=AHP4 PE=1 SV=2	AT3G16360.2	| Symbols: AHP4 | HPT phosphotransmitter 4 | chr3:5554351-5555518 FORWARD LENGTH=145	LOC_Os01g54050.1	protein|histidine-containing phosphotransfer protein, putative, expressed	IMGA|Medtr1g089130.1	Histidine phosphotransfer protein chr1 24402259-24405326 F EGN_Mt100125 20111014	GO:0000160|two-component signal transduction system (phosphorelay) GO:0009736|cytokinin mediated signaling pathway GO:0080036|regulation of cytokinin mediated signaling pathway	GO:0004871|signal transducer activity GO:0009927|histidine phosphotransfer kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_04844	A	A1S	Potri.001G465000	Potri.001G465000(AS)	POPTR_0001s46930	sp|Q9LU15|AHP4_ARATH	Histidine-containing phosphotransfer protein 4 OS=Arabidopsis thaliana GN=AHP4 PE=1 SV=2	AT3G16360.2	| Symbols: AHP4 | HPT phosphotransmitter 4 | chr3:5554351-5555518 FORWARD LENGTH=145	LOC_Os05g09410.1	protein|histidine-containing phosphotransfer protein 4, putative, expressed	IMGA|Medtr1g089130.1	Histidine phosphotransfer protein chr1 24402259-24405326 F EGN_Mt100125 20111014	GO:0000160|two-component signal transduction system (phosphorelay) GO:0009736|cytokinin mediated signaling pathway GO:0080036|regulation of cytokinin mediated signaling pathway	GO:0004871|signal transducer activity GO:0009927|histidine phosphotransfer kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_04845	A	A1S	Potri.001G465100	Potri.001G465100(AS)	POPTR_0001s46940	sp|Q6K5Q0|GL21_ORYSJ	Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica GN=Os02g0491600 PE=3 SV=1	AT5G39160.1	| Symbols: | RmlC-like cupins superfamily protein | chr5:15679195-15679970 REVERSE LENGTH=222	LOC_Os02g29000.1	protein|Cupin domain containing protein, expressed	IMGA|Medtr5g046430.1	Germin-like protein subfamily 1 member chr5 19943146-19942223 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0030145|manganese ion binding GO:0045735|nutrient reservoir activity	GO:0005576|extracellular region GO:0048046|apoplast
pt2_04846	A	A1S	Potri.001G465200	Potri.001G465200(AS)	POPTR_0001s46950	sp|O64583|P2C28_ARATH	Probable protein phosphatase 2C 28 OS=Arabidopsis thaliana GN=At2g34740 PE=2 SV=2	AT2G34740.1	| Symbols: | Protein phosphatase 2C family protein | chr2:14658730-14660305 FORWARD LENGTH=339	LOC_Os07g32380.1	protein|protein phosphatase 2C, putative, expressed	IMGA|Medtr5g063940.1	hypothetical protein chr5 25819289-25822814 F EGN_Mt100125 20111014	NA	GO:0003824|catalytic activity GO:0004722|protein serine/threonine phosphatase activity	GO:0005575|cellular_component
pt2_04847	A	A1S	Potri.001G465300	Potri.001G465300(AS)	POPTR_0001s46960	sp|Q9C5U8|HISX_ARATH	Histidinol dehydrogenase, chloroplastic OS=Arabidopsis thaliana GN=HDH PE=2 SV=1	AT5G63890.1	| Symbols: ATHDH, HISN8, HDH | histidinol dehydrogenase | chr5:25565600-25567879 REVERSE LENGTH=452	LOC_Os01g13190.1	protein|histidinol dehydrogenase, chloroplast precursor, putative, expressed	NA	NA	GO:0000105|histidine biosynthetic process GO:0008152|metabolic process GO:0008295|spermidine biosynthetic process GO:0009411|response to UV GO:0009555|pollen development GO:0055114|oxidation-reduction process	GO:0004399|histidinol dehydrogenase activity GO:0008270|zinc ion binding GO:0016491|oxidoreductase activity GO:0051287|NAD binding	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_04848	G	G1	NA	NA	POPTR_0001s46970	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04849	A	A1S	Potri.001G465500	Potri.001G465500(AS)	POPTR_0001s46980	sp|Q9C5Q8|HEN1_ARATH	Small RNA 2'-O-methyltransferase OS=Arabidopsis thaliana GN=HEN1 PE=1 SV=1	AT4G20910.2	| Symbols: HEN1 | double-stranded RNA binding protein-related / DsRBD protein-related | chr4:11186264-11190575 REVERSE LENGTH=942	LOC_Os07g06970.1	protein|HEN1, putative, expressed	NA	NA	GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0007267|cell-cell signaling GO:0009616|virus induced gene silencing GO:0009855|determination of bilateral symmetry GO:0009886|post-embryonic morphogenesis GO:0009909|regulation of flower development GO:0009944|polarity specification of adaxial/abaxial axis GO:0009965|leaf morphogenesis GO:0010014|meristem initiation GO:0010051|xylem and phloem pattern formation GO:0010093|specification of floral organ identity GO:0010267|production of ta-siRNAs involved in RNA interference GO:0010305|leaf vascular tissue pattern formation GO:0010589|leaf proximal/distal pattern formation GO:0016458|gene silencing GO:0016569|covalent chromatin modification GO:0016570|histone modification GO:0030422|production of siRNA involved in RNA interference GO:0031047|gene silencing by RNA GO:0034968|histone lysine methylation GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0035279|mRNA cleavage involved in gene silencing by miRNA GO:0048449|floral organ formation GO:0048451|petal formation GO:0048453|sepal formation GO:0048481|ovule development GO:0048507|meristem development	GO:0008173|RNA methyltransferase activity	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_04850	A	A1S	Potri.001G465600	Potri.001G465600(AS)	POPTR_0001s46990	sp|Q9SUC0|3HIDH_ARATH	Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Arabidopsis thaliana GN=At4g20930 PE=2 SV=3	AT4G20930.1	| Symbols: | 6-phosphogluconate dehydrogenase family protein | chr4:11198627-11201036 REVERSE LENGTH=347	LOC_Os06g46372.1	protein|dehydrogenase, putative, expressed	NA	NA	GO:0006098|pentose-phosphate shunt GO:0006573|valine metabolic process GO:0006574|valine catabolic process GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0004616|phosphogluconate dehydrogenase (decarboxylating) activity GO:0008442|3-hydroxyisobutyrate dehydrogenase activity GO:0016491|oxidoreductase activity GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0050662|coenzyme binding GO:0051287|NAD binding	GO:0005739|mitochondrion
pt2_04851	A	A1S	Potri.001G465800	Potri.001G465800(AS)	POPTR_0001s47000	sp|C0LGQ9|Y4294_ARATH	Probable LRR receptor-like serine/threonine-protein kinase At4g20940 OS=Arabidopsis thaliana GN=At4g20940 PE=1 SV=1	AT4G20940.1	| Symbols: | Leucine-rich receptor-like protein kinase family protein | chr4:11202728-11206038 FORWARD LENGTH=977	LOC_Os07g05190.1	protein|leucine-rich repeat family protein, putative, expressed	IMGA|Medtr5g087780.1	Receptor-like protein kinase BRI1-like protein chr5 37058034-37053822 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006499|N-terminal protein myristoylation GO:0007165|signal transduction GO:1901527|abscisic acid mediated signaling pathway involved in stomatal movement GO:1901528|hydrogen peroxide mediated signaling pathway involved in stomatal movement GO:1901529|positive regulation of anion channel activity	GO:0004672|protein kinase activity GO:0004713|protein tyrosine kinase activity GO:0005515|protein binding GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_04852	A	A1S	Potri.001G465900	Potri.001G465900(AS)	POPTR_0001s47010	sp|Q7ZWM6|OLA1_XENLA	Obg-like ATPase 1 OS=Xenopus laevis GN=ola1 PE=2 SV=1	AT1G30580.1	| Symbols: | GTP binding | chr1:10831953-10835454 REVERSE LENGTH=394	LOC_Os08g09940.1	protein|GTP-binding protein, putative, expressed	NA	NA	GO:0006094|gluconeogenesis GO:0006096|glycolysis GO:0006623|protein targeting to vacuole GO:0009651|response to salt stress GO:0046686|response to cadmium ion	GO:0005525|GTP binding	GO:0005829|cytosol GO:0009506|plasmodesma
pt2_04853	A	A1S	Potri.001G466000	Potri.001G466000(AS)	POPTR_0001s47020	sp|P36181|HSP80_SOLLC	Heat shock cognate protein 80 OS=Solanum lycopersicum GN=HSC80 PE=2 SV=1	AT5G56000.1	| Symbols: Hsp81.4, AtHsp90.4 | HEAT SHOCK PROTEIN 81.4 | chr5:22677602-22680067 REVERSE LENGTH=699	LOC_Os08g39140.1	protein|heat shock protein, putative, expressed	IMGA|Medtr5g096430.1	Heat shock protein chr5 41129100-41125832 F EGN_Mt100125 20111014	GO:0006457|protein folding GO:0006950|response to stress	GO:0005524|ATP binding GO:0051082|unfolded protein binding	GO:0005618|cell wall GO:0005634|nucleus GO:0005737|cytoplasm GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0005829|cytosol GO:0005886|plasma membrane GO:0009570|chloroplast stroma GO:0048046|apoplast
pt2_04854	A	A1S	Potri.001G466100	Potri.001G466100(AS)	POPTR_0001s47030	sp|O81767|PP348_ARATH	Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana GN=EMB2758 PE=2 SV=2	AT4G33990.1	| Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:16290141-16292612 REVERSE LENGTH=823	LOC_Os03g27880.1	protein|tetratricopeptide-like helical, putative, expressed	IMGA|Medtr5g040920.1	Pentatricopeptide repeat-containing protein chr5 17575750-17577620 H EGN_Mt100125 20111014	GO:0009793|embryo development ending in seed dormancy	NA	GO:0005739|mitochondrion
pt2_04855	A	A4S	Potri.001G466200	Potri.001G466200(AS) Potri.001G466300(DS) Potri.014G073200(DS) Potri.001G466400(DS)	POPTR_0001s47040	sp|O64640|CXE8_ARATH	Probable carboxylesterase 8 OS=Arabidopsis thaliana GN=CXE8 PE=2 SV=1	AT2G45600.1	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr2:18789799-18790788 FORWARD LENGTH=329	LOC_Os08g43430.1	protein|CXE carboxylesterase, putative, expressed	IMGA|Medtr1g012430.1	Arylacetamide deacetylase chr1 2909844-2908906 H EGN_Mt100125 20111014	GO:0008152|metabolic process	GO:0016787|hydrolase activity	GO:0005634|nucleus
pt2_04856	A	A3S	Potri.001G466300	Potri.001G466300(AS) Potri.001G466200(BS) Potri.001G466400(BS)	POPTR_0001s47050	sp|O64640|CXE8_ARATH	Probable carboxylesterase 8 OS=Arabidopsis thaliana GN=CXE8 PE=2 SV=1	AT2G45600.1	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr2:18789799-18790788 FORWARD LENGTH=329	LOC_Os08g43430.1	protein|CXE carboxylesterase, putative, expressed	IMGA|Medtr1g012430.1	Arylacetamide deacetylase chr1 2909844-2908906 H EGN_Mt100125 20111014	GO:0008152|metabolic process	GO:0016787|hydrolase activity	GO:0005634|nucleus
pt2_04857	A	A3S	Potri.001G466400	Potri.001G466400(AS) Potri.001G466200(BS) Potri.001G466300(BS)	POPTR_0001s47060	sp|O64640|CXE8_ARATH	Probable carboxylesterase 8 OS=Arabidopsis thaliana GN=CXE8 PE=2 SV=1	AT2G45600.1	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr2:18789799-18790788 FORWARD LENGTH=329	LOC_Os08g43430.1	protein|CXE carboxylesterase, putative, expressed	IMGA|Medtr1g012430.1	Arylacetamide deacetylase chr1 2909844-2908906 H EGN_Mt100125 20111014	GO:0008152|metabolic process	GO:0016787|hydrolase activity	GO:0005634|nucleus
pt2_04858	A	A1S	Potri.001G466500	Potri.001G466500(AS)	POPTR_0001s47070	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04859	A	A1S	Potri.001G466500	Potri.001G466500(AS)	POPTR_0001s47070	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04860	A	A1S	Potri.001G466600	Potri.001G466600(AS)	POPTR_0001s47080	NA	NA	AT2G25320.1	| Symbols: | TRAF-like family protein | chr2:10781951-10788065 REVERSE LENGTH=1673	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_04861	A	A1S	Potri.001G466700	Potri.001G466700(AS)	POPTR_0001s47090	sp|Q99685|MGLL_HUMAN	Monoglyceride lipase OS=Homo sapiens GN=MGLL PE=1 SV=2	AT5G14980.1	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr5:4849600-4850583 FORWARD LENGTH=327	LOC_Os01g21560.1	protein|esterase/lipase/thioesterase family protein, putative, expressed	IMGA|Medtr1g095110.1	Monoglyceride lipase chr1 27112088-27110884 E EGN_Mt100125 20111014	NA	GO:0003824|catalytic activity	GO:0005737|cytoplasm
pt2_04862	A	A1S	Potri.001G466800	Potri.001G466800(AS)	POPTR_0001s47100	sp|Q5BQN5|WAP_SOLLC	WPP domain-associated protein (Fragment) OS=Solanum lycopersicum GN=WAP PE=1 SV=1	AT2G34730.1	| Symbols: | myosin heavy chain-related | chr2:14654611-14657443 FORWARD LENGTH=825	LOC_Os12g41810.1	protein|expressed protein	NA	NA	NA	NA	GO:0005634|nucleus GO:0005739|mitochondrion
pt2_04863	A	A2S	Potri.001G466900	Potri.001G466900(AS) Potri.011G164500(DS)	POPTR_0001s47110	sp|Q54PM7|NAGK_DICDI	N-acetyl-D-glucosamine kinase OS=Dictyostelium discoideum GN=nagk PE=3 SV=2	AT1G30540.1	| Symbols: | Actin-like ATPase superfamily protein | chr1:10816951-10819172 REVERSE LENGTH=351	LOC_Os09g04800.1	protein|ATPase BadF/BadG/BcrA/BcrD type, putative, expressed	IMGA|Medtr5g090130.2	N-acetyl-D-glucosamine kinase chr5 38221018-38216122 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0016887|ATPase activity	GO:0005737|cytoplasm
pt2_04864	A	A1S	Potri.001G467000	Potri.001G467000(AS)	POPTR_0001s47120	sp|Q9SA72|Y1357_ARATH	Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1	AT1G30570.1	| Symbols: HERK2 | hercules receptor kinase 2 | chr1:10828933-10831482 FORWARD LENGTH=849	LOC_Os04g52860.1	protein|TKL_IRAK_CrRLK1L-1.9 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed	IMGA|contig_75928_1.1	Receptor-like kinase contig_75928 234-3010 H PREDN 20111014	GO:0006468|protein phosphorylation GO:0009741|response to brassinosteroid stimulus GO:0009826|unidimensional cell growth GO:0051510|regulation of unidimensional cell growth	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_04865	A	A1S	Potri.001G467100	Potri.001G467100(AS)	POPTR_0001s47130	sp|Q944B0|FK161_ARATH	Peptidyl-prolyl cis-trans isomerase FKBP16-1, chloroplastic OS=Arabidopsis thaliana GN=FKBP16-1 PE=2 SV=1	AT4G26555.1	| Symbols: | FKBP-like peptidyl-prolyl cis-trans isomerase family protein | chr4:13404622-13406178 REVERSE LENGTH=207	LOC_Os02g10590.1	protein|peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed	NA	NA	GO:0000412|histone peptidyl-prolyl isomerization GO:0006457|protein folding GO:0018208|peptidyl-proline modification	GO:0003755|peptidyl-prolyl cis-trans isomerase activity GO:0005528|FK506 binding	GO:0005730|nucleolus GO:0009507|chloroplast GO:0016020|membrane
pt2_04866	A	A1S	Potri.001G467200	Potri.001G467200(AS)	POPTR_0001s47140	NA	NA	AT4G26550.1	| Symbols: | Got1/Sft2-like vescicle transport protein family | chr4:13402755-13404208 REVERSE LENGTH=225	NA	NA	NA	NA	GO:0006810|transport GO:0006891|intra-Golgi vesicle-mediated transport GO:0006944|cellular membrane fusion GO:0016192|vesicle-mediated transport	GO:0003674|molecular_function	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_04867	A	A1S	Potri.001G467300	Potri.001G467300(AS)	POPTR_0001s47150	sp|C0LGR3|Y4265_ARATH	Probable LRR receptor-like serine/threonine-protein kinase At4g26540 OS=Arabidopsis thaliana GN=At4g26540 PE=1 SV=1	AT4G26540.1	| Symbols: | Leucine-rich repeat receptor-like protein kinase family protein | chr4:13394673-13398028 REVERSE LENGTH=1091	LOC_Os08g38560.1	protein|receptor-like protein kinase 2 precursor, putative, expressed	IMGA|Medtr5g045910.1	Receptor-like protein kinase chr5 19714325-19723568 E EGN_Mt100125 20111014	GO:0002237|response to molecule of bacterial origin GO:0006084|acetyl-CoA metabolic process GO:0006468|protein phosphorylation GO:0007165|signal transduction GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway GO:0010075|regulation of meristem growth GO:0010103|stomatal complex morphogenesis GO:0016126|sterol biosynthetic process GO:0016132|brassinosteroid biosynthetic process GO:0048443|stamen development GO:0048653|anther development	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_04868	A	A1S	Potri.001G467400	Potri.001G467400(AS)	POPTR_0001s47160	NA	NA	AT3G13226.1	| Symbols: | regulatory protein RecX family protein | chr3:4264442-4266286 REVERSE LENGTH=382	LOC_Os04g57230.2	protein|regulatory protein RecX family protein, putative, expressed	IMGA|Medtr5g096560.1	Regulatory protein recX chr5 41189810-41184445 E EGN_Mt100125 20111014	GO:0006282|regulation of DNA repair GO:0007126|meiosis	GO:0003674|molecular_function	GO:0005737|cytoplasm
pt2_04869	C	C1S	Potri.001G467500	Potri.001G467500(CS)	NA	NA	AT2G04220.1	| Symbols: | Plant protein of unknown function (DUF868) | chr2:1445401-1446324 FORWARD LENGTH=307	LOC_Os02g10530.1	protein|expressed protein	IMGA|Medtr5g096570.1	Kinesin-4 chr5 41201995-41191073 E EGN_Mt100125 20111014	GO:0008150|biological_process GO:0048446|petal morphogenesis	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_04870	A	A1S	Potri.001G467600	Potri.001G467600(AS)	POPTR_0001s47180	sp|O81635|ATK4_ARATH	Kinesin-4 OS=Arabidopsis thaliana GN=ATK4 PE=1 SV=2	AT3G44730.1	| Symbols: ATKP1, KP1 | kinesin-like protein 1 | chr3:16285888-16290852 FORWARD LENGTH=1087	LOC_Os12g36100.1	protein|kinesin-4, putative, expressed	IMGA|Medtr5g096570.1	Kinesin-4 chr5 41201995-41191073 E EGN_Mt100125 20111014	GO:0009060|aerobic respiration	GO:0003777|microtubule motor activity GO:0005524|ATP binding	GO:0005737|cytoplasm GO:0005739|mitochondrion
pt2_04871	A	A2S	Potri.001G467800	Potri.001G467800(AS) Potri.011G165100(BS)	POPTR_0001s47190	sp|Q8VYB2|UKL3_ARATH	Uridine kinase-like protein 3 OS=Arabidopsis thaliana GN=UKL3 PE=1 SV=1	AT1G55810.3	| Symbols: UKL3 | uridine kinase-like 3 | chr1:20861273-20864003 FORWARD LENGTH=466	LOC_Os11g16370.1	protein|uridine/cytidine kinase-like 1, putative, expressed	IMGA|Medtr5g096660.1	Uridine-cytidine kinase A chr5 41233463-41240199 E EGN_Mt100125 20111014	GO:0006094|gluconeogenesis GO:0007010|cytoskeleton organization GO:0008152|metabolic process GO:0009058|biosynthetic process GO:0010498|proteasomal protein catabolic process	GO:0004845|uracil phosphoribosyltransferase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016773|phosphotransferase activity, alcohol group as acceptor	GO:0005575|cellular_component
pt2_04872	A	A2S	Potri.001G467800	Potri.001G467800(AS) Potri.001G468000(AA)	POPTR_0001s47190	sp|Q8VYB2|UKL3_ARATH	Uridine kinase-like protein 3 OS=Arabidopsis thaliana GN=UKL3 PE=1 SV=1	AT1G55810.3	| Symbols: UKL3 | uridine kinase-like 3 | chr1:20861273-20864003 FORWARD LENGTH=466	LOC_Os11g16370.1	protein|uridine/cytidine kinase-like 1, putative, expressed	IMGA|Medtr5g096660.1	Uridine-cytidine kinase A chr5 41233463-41240199 E EGN_Mt100125 20111014	GO:0006094|gluconeogenesis GO:0007010|cytoskeleton organization GO:0008152|metabolic process GO:0009058|biosynthetic process GO:0010498|proteasomal protein catabolic process	GO:0004845|uracil phosphoribosyltransferase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016773|phosphotransferase activity, alcohol group as acceptor	GO:0005575|cellular_component
pt2_04873	A	A1S	Potri.001G468000	Potri.001G468000(AS)	POPTR_0001s47200	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04874	A	A1S	Potri.001G468100	Potri.001G468100(AS)	POPTR_0001s47210	sp|P46256|ALF1_PEA	Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 OS=Pisum sativum PE=2 SV=1	AT4G26530.2	| Symbols: | Aldolase superfamily protein | chr4:13391566-13392937 FORWARD LENGTH=358	LOC_Os06g40640.2	protein|fructose-bisphospate aldolase isozyme, putative, expressed	IMGA|Medtr5g096670.1	Fructose-bisphosphate aldolase chr5 41240625-41242678 F EGN_Mt100125 20111014	GO:0000023|maltose metabolic process GO:0006096|glycolysis GO:0006098|pentose-phosphate shunt GO:0009718|anthocyanin-containing compound biosynthetic process GO:0019252|starch biosynthetic process	GO:0003824|catalytic activity GO:0004332|fructose-bisphosphate aldolase activity	GO:0005737|cytoplasm GO:0009507|chloroplast
pt2_04875	A	A1S	Potri.001G468200	Potri.001G468200(AS)	POPTR_0001s47220	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04876	A	A1S	Potri.001G468300	Potri.001G468300(AS)	POPTR_0001s47230	sp|Q84W65|SUFE_ARATH	SufE-like protein, chloroplastic OS=Arabidopsis thaliana GN=EMB1374 PE=1 SV=2	AT4G26500.1	| Symbols: EMB1374, CPSUFE, ATSUFE, SUFE1 | chloroplast sulfur E | chr4:13382456-13383571 REVERSE LENGTH=371	LOC_Os09g09790.1	protein|Fe-S metabolism associated domain containing protein, expressed	NA	NA	GO:0009073|aromatic amino acid family biosynthetic process GO:0009793|embryo development ending in seed dormancy GO:0010027|thylakoid membrane organization GO:0010228|vegetative to reproductive phase transition of meristem GO:0016226|iron-sulfur cluster assembly GO:0019243|methylglyoxal catabolic process to D-lactate GO:0048481|ovule development	GO:0008047|enzyme activator activity	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_04877	A	A2S	Potri.001G468400	Potri.001G468400(AS) Potri.011G165500(DS)	POPTR_0001s47240	NA	NA	AT4G26490.1	| Symbols: | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | chr4:13380425-13381231 FORWARD LENGTH=268	LOC_Os08g38580.1	protein|harpin-induced protein 1 domain containing protein, expressed	IMGA|Medtr5g096680.1	hypothetical protein chr5 41247722-41247006 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_04878	A	A1S	Potri.001G468500	Potri.001G468500(AS)	POPTR_0001s47250	NA	NA	AT4G05030.1	| Symbols: | Copper transport protein family | chr4:2576790-2577974 REVERSE LENGTH=110	LOC_Os02g37280.1	protein|heavy metal transport/detoxification protein, putative, expressed	IMGA|Medtr5g084660.1	hypothetical protein chr5 35516785-35517474 H EGN_Mt100125 20111014	NA	GO:0046872|metal ion binding	NA
pt2_04879	A	A1S	Potri.001G468600	Potri.001G468600(AS)	POPTR_0001s47260	NA	NA	NA	NA	NA	NA	IMGA|contig_50672_1.1	NBS-LRR disease resistance protein contig_50672 5904-3070 E PREDN 20111014	NA	NA	NA
pt2_04880	A	A1S	Potri.001G468700	Potri.001G468700(AS)	POPTR_0001s47270	sp|Q680K8|Y1576_ARATH	BTB/POZ domain-containing protein At1g55760 OS=Arabidopsis thaliana GN=At1g55760 PE=2 SV=1	AT1G55760.1	| Symbols: | BTB/POZ domain-containing protein | chr1:20847117-20848507 REVERSE LENGTH=329	LOC_Os08g38700.1	protein|C3-BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with C3 subfamily conserved sequence, expressed	IMGA|Medtr5g096700.1	TD and POZ domain-containing protein chr5 41253561-41255414 F EGN_Mt100125 20111014	GO:0008150|biological_process	NA	NA
pt2_04881	A	A1S	Potri.001G468800	Potri.001G468800(AS)	POPTR_0001s47280	sp|O65351|SUBL_ARATH	Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1	AT5G59810.1	| Symbols: ATSBT5.4, SBT5.4 | Subtilase family protein | chr5:24096895-24100387 REVERSE LENGTH=778	LOC_Os09g30250.1	protein|OsSub58 - Putative Subtilisin homologue, expressed	IMGA|Medtr5g055920.1	Subtilisin-like protease chr5 22497235-22500845 H EGN_Mt100125 20111014	GO:0006508|proteolysis GO:0008152|metabolic process GO:0043086|negative regulation of catalytic activity	GO:0004252|serine-type endopeptidase activity GO:0042802|identical protein binding	GO:0005618|cell wall
pt2_04882	A	A1S	Potri.001G468900	Potri.001G468900(AS)	POPTR_0001s47290	sp|O65351|SUBL_ARATH	Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1	AT5G59810.1	| Symbols: ATSBT5.4, SBT5.4 | Subtilase family protein | chr5:24096895-24100387 REVERSE LENGTH=778	LOC_Os09g30250.1	protein|OsSub58 - Putative Subtilisin homologue, expressed	IMGA|Medtr5g085690.1	Subtilisin-like protease chr5 36009062-36004195 H EGN_Mt100125 20111014	GO:0006508|proteolysis GO:0008152|metabolic process GO:0043086|negative regulation of catalytic activity	GO:0004252|serine-type endopeptidase activity GO:0042802|identical protein binding	GO:0005618|cell wall
pt2_04883	A	A1S	Potri.001G469000	Potri.001G469000(AS)	POPTR_0001s47300	sp|O65351|SUBL_ARATH	Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1	AT5G59810.1	| Symbols: ATSBT5.4, SBT5.4 | Subtilase family protein | chr5:24096895-24100387 REVERSE LENGTH=778	LOC_Os09g30250.1	protein|OsSub58 - Putative Subtilisin homologue, expressed	IMGA|Medtr5g055920.1	Subtilisin-like protease chr5 22497235-22500845 H EGN_Mt100125 20111014	GO:0006508|proteolysis GO:0008152|metabolic process GO:0043086|negative regulation of catalytic activity	GO:0004252|serine-type endopeptidase activity GO:0042802|identical protein binding	GO:0005618|cell wall
pt2_04884	A	A1S	Potri.001G469100	Potri.001G469100(AS)	POPTR_0001s47310	sp|O65351|SUBL_ARATH	Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1	AT2G04160.1	| Symbols: AIR3 | Subtilisin-like serine endopeptidase family protein | chr2:1401450-1407694 REVERSE LENGTH=772	LOC_Os02g10520.1	protein|OsSub12 - Putative Subtilisin homologue, expressed	IMGA|Medtr5g055920.1	Subtilisin-like protease chr5 22497235-22500845 H EGN_Mt100125 20111014	GO:0006508|proteolysis GO:0008152|metabolic process GO:0009733|response to auxin stimulus GO:0010102|lateral root morphogenesis GO:0019761|glucosinolate biosynthetic process GO:0043086|negative regulation of catalytic activity	GO:0004252|serine-type endopeptidase activity GO:0042802|identical protein binding	GO:0005576|extracellular region GO:0005618|cell wall
pt2_04885	A	A1S	Potri.001G469200	Potri.001G469200(AS)	POPTR_0001s47320	sp|A7RP64|PNO1_NEMVE	RNA-binding protein pno1 OS=Nematostella vectensis GN=pno1 PE=3 SV=1	AT3G13230.1	| Symbols: | RNA-binding KH domain-containing protein | chr3:4270423-4271070 FORWARD LENGTH=215	LOC_Os03g02420.1	protein|KH domain containing protein, putative, expressed	IMGA|Medtr5g088410.1	RNA-binding protein PNO1 chr5 37338877-37338251 H EGN_Mt100125 20111014	GO:0006364|rRNA processing	GO:0003723|RNA binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04886	A	A1S	Potri.001G469300	Potri.001G469300(AS)	POPTR_0001s47330	sp|Q0U3Y6|DDI1_PHANO	DNA damage-inducible protein 1 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) GN=DDI1 PE=3 SV=2	AT3G13235.3	| Symbols: | ubiquitin family protein | chr3:4271492-4274348 REVERSE LENGTH=413	LOC_Os02g10510.1	protein|Ubiquitin family domain containing protein, expressed	NA	NA	GO:0006486|protein glycosylation GO:0006508|proteolysis GO:0046686|response to cadmium ion	GO:0004190|aspartic-type endopeptidase activity	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol
pt2_04887	A	A1S	Potri.001G469400	Potri.001G469400(AS)	POPTR_0001s47340	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_04888	A	A2S	Potri.001G469500	Potri.001G469500(AS) Potri.011G166400(DS)	POPTR_0001s47350	sp|Q9LTT8|VCS_ARATH	Enhancer of mRNA-decapping protein 4 OS=Arabidopsis thaliana GN=VCS PE=1 SV=1	AT3G13300.2	| Symbols: VCS | Transducin/WD40 repeat-like superfamily protein | chr3:4304085-4309949 FORWARD LENGTH=1309	LOC_Os02g49090.2	protein|WD domain, G-beta repeat domain containing protein, expressed	NA	NA	GO:0006402|mRNA catabolic process GO:0009791|post-embryonic development GO:0009965|leaf morphogenesis GO:0010071|root meristem specification GO:0010072|primary shoot apical meristem specification GO:0031087|deadenylation-independent decapping of nuclear-transcribed mRNA GO:0071365|cellular response to auxin stimulus	GO:0000166|nucleotide binding GO:0005515|protein binding GO:0042803|protein homodimerization activity	GO:0000932|cytoplasmic mRNA processing body GO:0005634|nucleus GO:0005829|cytosol
pt2_04889	A	A1S	Potri.001G469600	Potri.001G469600(AS)	POPTR_0001s47360	sp|Q9FYB5|DNJ11_ARATH	Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana GN=ATJ11 PE=1 SV=2	AT3G13310.1	| Symbols: | Chaperone DnaJ-domain superfamily protein | chr3:4310827-4311300 REVERSE LENGTH=157	LOC_Os08g43490.1	protein|heat shock protein DnaJ, putative, expressed	IMGA|Medtr5g022130.1	Chaperone protein dnaJ chr5 8438448-8439290 F EGN_Mt100125 20111014	GO:0006457|protein folding	GO:0031072|heat shock protein binding GO:0051082|unfolded protein binding	NA
pt2_04890	A	A1S	Potri.001G469700	Potri.001G469700(AS)	POPTR_0001s47370	sp|Q9FKT8|COX15_ARATH	Cytochrome c oxidase assembly protein COX15 OS=Arabidopsis thaliana GN=COX15 PE=2 SV=1	AT5G56090.1	| Symbols: COX15 | cytochrome c oxidase 15 | chr5:22714634-22716605 FORWARD LENGTH=457	LOC_Os08g38720.1	protein|cytochrome c oxidase assembly protein COX15, putative, expressed	IMGA|Medtr5g096830.1	Cytochrome c oxidase assembly protein COX15-like protein chr5 41313996-41320006 H EGN_Mt100125 20111014	GO:0006461|protein complex assembly GO:0006784|heme a biosynthetic process GO:0016126|sterol biosynthetic process GO:0019745|pentacyclic triterpenoid biosynthetic process GO:0055114|oxidation-reduction process	GO:0003674|molecular_function GO:0016627|oxidoreductase activity, acting on the CH-CH group of donors	GO:0005739|mitochondrion GO:0016020|membrane
pt2_04891	A	A1S	Potri.001G469800	Potri.001G469800(AS)	POPTR_0001s47380	sp|Q8L783|CAX5_ARATH	Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana GN=CAX5 PE=2 SV=1	AT1G55730.2	| Symbols: ATCAX5, CAX5 | cation exchanger 5 | chr1:20831387-20833941 REVERSE LENGTH=441	LOC_Os03g27960.1	protein|sodium/calcium exchanger protein, putative, expressed	IMGA|Medtr5g070330.1	Vacuolar cation/proton exchanger chr5 28799924-28794477 E EGN_Mt100125 20111014	GO:0000041|transition metal ion transport GO:0006612|protein targeting to membrane GO:0006812|cation transport GO:0006816|calcium ion transport GO:0006820|anion transport GO:0006828|manganese ion transport GO:0006862|nucleotide transport GO:0006882|cellular zinc ion homeostasis GO:0006888|ER to Golgi vesicle-mediated transport GO:0006944|cellular membrane fusion GO:0009624|response to nematode GO:0010363|regulation of plant-type hypersensitive response GO:0015691|cadmium ion transport GO:0015696|ammonium transport GO:0015802|basic amino acid transport GO:0030001|metal ion transport GO:0043069|negative regulation of programmed cell death GO:0043090|amino acid import GO:0043269|regulation of ion transport GO:0055085|transmembrane transport	GO:0008324|cation transmembrane transporter activity GO:0015368|calcium:cation antiporter activity GO:0015369|calcium:hydrogen antiporter activity GO:0015491|cation:cation antiporter activity	GO:0005773|vacuole GO:0009705|plant-type vacuole membrane GO:0012505|endomembrane system GO:0016021|integral to membrane
pt2_04892	A	A1S	Potri.001G470000	Potri.001G470000(AS)	POPTR_0001s47390	sp|Q9FF99|AAP7_ARATH	Probable amino acid permease 7 OS=Arabidopsis thaliana GN=AAP7 PE=1 SV=1	AT5G23810.1	| Symbols: AAP7 | amino acid permease 7 | chr5:8028461-8030730 FORWARD LENGTH=467	LOC_Os04g39489.1	protein|amino acid transporter, putative, expressed	IMGA|Medtr5g096840.1	Amino acid permease chr5 41321043-41324557 E EGN_Mt100125 20111014	GO:0006865|amino acid transport	GO:0015171|amino acid transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_04893	A	A1S	Potri.001G470100	Potri.001G470100(AS)	POPTR_0001s47400	sp|Q9SVG4|RETOL_ARATH	Reticuline oxidase-like protein OS=Arabidopsis thaliana GN=At4g20830 PE=1 SV=2	AT1G30700.1	| Symbols: | FAD-binding Berberine family protein | chr1:10892623-10894437 FORWARD LENGTH=527	LOC_Os06g35590.1	protein|reticuline oxidase-like protein precursor, putative, expressed	IMGA|contig_77107_1.1	(S)-reticuline oxidase-like protein contig_77107 1833-1018 H PREDN 20111014	GO:0006865|amino acid transport GO:0009407|toxin catabolic process GO:0010583|response to cyclopentenone GO:0055114|oxidation-reduction process	GO:0003824|catalytic activity GO:0008762|UDP-N-acetylmuramate dehydrogenase activity GO:0009055|electron carrier activity GO:0016491|oxidoreductase activity GO:0016614|oxidoreductase activity, acting on CH-OH group of donors GO:0050660|flavin adenine dinucleotide binding	GO:0009507|chloroplast
pt2_04894	A	A1S	Potri.001G470200	Potri.001G470200(AS)	POPTR_0001s47410	sp|Q39134|AAP3_ARATH	Amino acid permease 3 OS=Arabidopsis thaliana GN=AAP3 PE=1 SV=2	AT1G77380.1	| Symbols: AAP3, ATAAP3 | amino acid permease 3 | chr1:29075201-29077252 REVERSE LENGTH=476	LOC_Os04g56470.1	protein|amino acid transporter, putative, expressed	IMGA|Medtr5g096840.1	Amino acid permease chr5 41321043-41324557 E EGN_Mt100125 20111014	GO:0006612|protein targeting to membrane GO:0006820|anion transport GO:0006862|nucleotide transport GO:0006865|amino acid transport GO:0006888|ER to Golgi vesicle-mediated transport GO:0006944|cellular membrane fusion GO:0010363|regulation of plant-type hypersensitive response GO:0015696|ammonium transport GO:0015802|basic amino acid transport GO:0043069|negative regulation of programmed cell death GO:0043090|amino acid import GO:0043269|regulation of ion transport	GO:0015171|amino acid transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_04895	A	A1S	Potri.001G470300	Potri.001G470300(AS)	POPTR_0001s47420	sp|O75629|CREG1_HUMAN	Protein CREG1 OS=Homo sapiens GN=CREG1 PE=1 SV=1	AT2G04690.1	| Symbols: | Pyridoxamine 5'-phosphate oxidase family protein | chr2:1644628-1646179 FORWARD LENGTH=210	LOC_Os06g13100.1	protein|CREG1 precursor, putative, expressed	NA	NA	GO:0006661|phosphatidylinositol biosynthetic process GO:0008150|biological_process GO:0055114|oxidation-reduction process	GO:0010181|FMN binding GO:0016491|oxidoreductase activity	GO:0005576|extracellular region GO:0005773|vacuole
pt2_04896	A	A1S	Potri.001G470500	Potri.001G470500(AS)	POPTR_0001s47430	sp|Q8GWP0|MYB39_ARATH	Transcription factor MYB39 OS=Arabidopsis thaliana GN=MYB39 PE=2 SV=1	AT5G56110.1	| Symbols: AtMYB103, ATMYB80, MYB103, MS188 | myb domain protein 103 | chr5:22719191-22720664 FORWARD LENGTH=320	LOC_Os04g39470.1	protein|MYB family transcription factor, putative, expressed	IMGA|contig_8784_1.1	MYB transcription factor contig_8784 1272-2445 H PREDN 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0010090|trichome morphogenesis GO:0048658|tapetal layer development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_04897	A	A2S	Potri.001G470600	Potri.001G470600(AS) Potri.011G167700(DS)	POPTR_0001s47440	sp|Q5SSW2|PSME4_MOUSE	Proteasome activator complex subunit 4 OS=Mus musculus GN=Psme4 PE=1 SV=1	AT3G13330.1	| Symbols: PA200 | proteasome activating protein 200 | chr3:4319804-4330061 REVERSE LENGTH=1816	LOC_Os06g19730.1	protein|HEAT repeat family protein, putative, expressed	IMGA|contig_116364_1.1	Proteasome activator complex subunit contig_116364 1393-683 H PREDN 20111014	NA	NA	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04898	A	A1S	Potri.001G470700	Potri.001G470700(AS)	POPTR_0001s47450	sp|P04669|FER_SILPR	Ferredoxin, chloroplastic OS=Silene pratensis GN=PETF PE=2 SV=1	AT1G60950.1	| Symbols: FED A, ATFD2 | 2Fe-2S ferredoxin-like superfamily protein | chr1:22444565-22445011 FORWARD LENGTH=148	LOC_Os08g01380.1	protein|2Fe-2S iron-sulfur cluster binding domain containing protein, expressed	IMGA|Medtr5g006320.1	Ferredoxin chr5 620236-619542 F EGN_Mt100125 20111014	GO:0009416|response to light stimulus GO:0009637|response to blue light GO:0009644|response to high light intensity GO:0009744|response to sucrose stimulus GO:0009767|photosynthetic electron transport chain GO:0009773|photosynthetic electron transport in photosystem I GO:0010114|response to red light GO:0010155|regulation of proton transport GO:0010207|photosystem II assembly GO:0010218|response to far red light GO:0022900|electron transport chain GO:0042742|defense response to bacterium	GO:0009055|electron carrier activity GO:0051536|iron-sulfur cluster binding GO:0051537|2 iron, 2 sulfur cluster binding	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_04899	A	A1S	Potri.001G470800	Potri.001G470800(AS)	POPTR_0001s47470	NA	NA	AT5G56120.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G12870.1); Has 77 Blast hits to 75 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:22721483-22722193 FORWARD LENGTH=236	LOC_Os08g38790.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_04900	A	A1S	Potri.001G470900	Potri.001G470900(AS)	POPTR_0001s47480	sp|Q8VE80|THOC3_MOUSE	THO complex subunit 3 OS=Mus musculus GN=Thoc3 PE=2 SV=1	AT5G56130.1	| Symbols: TEX1, AtTEX1, THO3 | Transducin/WD40 repeat-like superfamily protein | chr5:22722755-22725065 REVERSE LENGTH=315	LOC_Os09g12710.1	protein|WD domain, G-beta repeat domain containing protein, expressed	IMGA|contig_53197_1.1	Wd-repeat protein contig_53197 137-4865 E PREDN 20111014	GO:0010267|production of ta-siRNAs involved in RNA interference GO:0031047|gene silencing by RNA	GO:0000166|nucleotide binding	GO:0005737|cytoplasm GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_04901	A	A1S	Potri.001G471000	Potri.001G471000(AS)	POPTR_0001s47490	sp|Q9FKT4|QKIL2_ARATH	KH domain-containing protein At5g56140 OS=Arabidopsis thaliana GN=At5g56140 PE=2 SV=1	AT5G56140.1	| Symbols: | RNA-binding KH domain-containing protein | chr5:22725462-22727932 FORWARD LENGTH=315	LOC_Os02g49080.1	protein|KH domain containing protein, putative, expressed	IMGA|Medtr5g075710.2	KH domain-containing protein chr5 31223217-31220331 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04902	A	A1S	Potri.001G471100	Potri.001G471100(AS)	POPTR_0001s47510	sp|Q52K82|CML21_ARATH	Probable calcium-binding protein CML21 OS=Arabidopsis thaliana GN=CML21 PE=2 SV=1	AT4G26470.1	| Symbols: | Calcium-binding EF-hand family protein | chr4:13371377-13372343 FORWARD LENGTH=231	LOC_Os06g40720.1	protein|EF hand family protein, putative, expressed	NA	NA	GO:0000041|transition metal ion transport GO:0006499|N-terminal protein myristoylation GO:0007165|signal transduction GO:0009407|toxin catabolic process GO:0009693|ethylene biosynthetic process GO:0009827|plant-type cell wall modification GO:0009860|pollen tube growth GO:0010359|regulation of anion channel activity GO:0010583|response to cyclopentenone	GO:0005509|calcium ion binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_04903	A	A1S	Potri.001G471100	Potri.001G471100(AS)	POPTR_0001s47510	sp|Q52K82|CML21_ARATH	Probable calcium-binding protein CML21 OS=Arabidopsis thaliana GN=CML21 PE=2 SV=1	AT4G26470.1	| Symbols: | Calcium-binding EF-hand family protein | chr4:13371377-13372343 FORWARD LENGTH=231	LOC_Os06g40720.1	protein|EF hand family protein, putative, expressed	NA	NA	GO:0000041|transition metal ion transport GO:0006499|N-terminal protein myristoylation GO:0007165|signal transduction GO:0009407|toxin catabolic process GO:0009693|ethylene biosynthetic process GO:0009827|plant-type cell wall modification GO:0009860|pollen tube growth GO:0010359|regulation of anion channel activity GO:0010583|response to cyclopentenone	GO:0005509|calcium ion binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_04904	A	A1S	Potri.001G471100	Potri.001G471100(AS)	POPTR_0001s47510	sp|Q52K82|CML21_ARATH	Probable calcium-binding protein CML21 OS=Arabidopsis thaliana GN=CML21 PE=2 SV=1	AT4G26470.1	| Symbols: | Calcium-binding EF-hand family protein | chr4:13371377-13372343 FORWARD LENGTH=231	LOC_Os06g40720.1	protein|EF hand family protein, putative, expressed	NA	NA	GO:0000041|transition metal ion transport GO:0006499|N-terminal protein myristoylation GO:0007165|signal transduction GO:0009407|toxin catabolic process GO:0009693|ethylene biosynthetic process GO:0009827|plant-type cell wall modification GO:0009860|pollen tube growth GO:0010359|regulation of anion channel activity GO:0010583|response to cyclopentenone	GO:0005509|calcium ion binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_04905	A	A1S	Potri.001G471200	Potri.001G471200(AS)	POPTR_0001s47520	sp|P35135|UBC4_SOLLC	Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1	AT1G64230.2	| Symbols: UBC28 | ubiquitin-conjugating enzyme 28 | chr1:23833792-23835220 FORWARD LENGTH=148	LOC_Os04g57220.1	protein|ubiquitin-conjugating enzyme, putative, expressed	IMGA|Medtr5g075580.1	Ubiquitin carrier protein chr5 31157779-31152864 E EGN_Mt100125 20111014	GO:0006301|postreplication repair GO:0006511|ubiquitin-dependent protein catabolic process GO:0006635|fatty acid beta-oxidation GO:0006944|cellular membrane fusion GO:0016558|protein import into peroxisome matrix GO:0042023|DNA endoreduplication GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0043248|proteasome assembly GO:0044265|cellular macromolecule catabolic process GO:0048193|Golgi vesicle transport GO:0051510|regulation of unidimensional cell growth GO:0051788|response to misfolded protein	GO:0004842|ubiquitin-protein ligase activity GO:0016881|acid-amino acid ligase activity GO:0031625|ubiquitin protein ligase binding	GO:0005575|cellular_component GO:0005737|cytoplasm GO:0005886|plasma membrane
pt2_04906	A	A1S	Potri.001G471300	Potri.001G471300(AS)	POPTR_0001s47530	sp|Q10137|SEC14_SCHPO	Sec14 cytosolic factor OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sec14 PE=2 SV=1	AT1G55690.3	| Symbols: | Sec14p-like phosphatidylinositol transfer family protein | chr1:20808712-20811831 REVERSE LENGTH=621	LOC_Os08g25310.1	protein|phosphatidylinositol transfer, putative, expressed	IMGA|Medtr5g021050.1	Phosphatidylinositol transfer-like protein IV chr5 7812729-7816184 E EGN_Mt100125 20111014	GO:0006810|transport GO:0010228|vegetative to reproductive phase transition of meristem GO:0016926|protein desumoylation GO:0050665|hydrogen peroxide biosynthetic process	GO:0005215|transporter activity	GO:0005575|cellular_component GO:0005794|Golgi apparatus
pt2_04907	B	B1S	Potri.001G471400	Potri.001G471400(BS)	POPTR_0001s47540	sp|Q9FKT0|ARP8_ARATH	Actin-related protein 8 OS=Arabidopsis thaliana GN=ARP8 PE=2 SV=1	AT5G56180.1	| Symbols: ATARP8, ARP8 | actin-related protein 8 | chr5:22737539-22740986 REVERSE LENGTH=471	LOC_Os04g57210.1	protein|actin-6, putative, expressed	NA	NA	NA	GO:0005200|structural constituent of cytoskeleton	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_04908	A	A1S	Potri.001G471500	Potri.001G471500(AS)	POPTR_0001s47550	sp|B3GS44|LRE_ARATH	GPI-anchored protein LORELEI OS=Arabidopsis thaliana GN=LRE PE=2 SV=1	AT5G56170.1	| Symbols: LLG1 | LORELEI-LIKE-GPI-ANCHORED PROTEIN 1 | chr5:22736072-22737108 FORWARD LENGTH=168	LOC_Os02g48980.1	protein|GPI-anchored protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005886|plasma membrane GO:0031225|anchored to membrane GO:0090406|pollen tube
pt2_04909	A	A2S	Potri.001G471600	Potri.001G471600(AS) Potri.001G471700(AA)	POPTR_0001s47560	sp|Q9FJY7|PP449_ARATH	Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1	AT5G66520.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:26551879-26553741 FORWARD LENGTH=620	LOC_Os05g36350.1	protein|pentatricopeptide, putative, expressed	IMGA|Medtr5g020650.1	Pentatricopeptide repeat-containing protein chr5 7655084-7653528 E EGN_Mt100125 20111014	GO:0008150|biological_process GO:0016556|mRNA modification	NA	GO:0005575|cellular_component
pt2_04910	A	A1S	Potri.001G471700	Potri.001G471700(AS)	POPTR_0001s47570	sp|Q9FKT0|ARP8_ARATH	Actin-related protein 8 OS=Arabidopsis thaliana GN=ARP8 PE=2 SV=1	AT5G56180.1	| Symbols: ATARP8, ARP8 | actin-related protein 8 | chr5:22737539-22740986 REVERSE LENGTH=471	LOC_Os04g57210.1	protein|actin-6, putative, expressed	NA	NA	NA	GO:0005200|structural constituent of cytoskeleton	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_04911	A	A1S	Potri.001G471800	Potri.001G471800(AS)	POPTR_0001s47580	sp|Q9Y7K5|YGI3_SCHPO	Uncharacterized WD repeat-containing protein C2A9.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC2A9.03 PE=2 SV=2	AT3G13340.2	| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr3:4332370-4334603 FORWARD LENGTH=447	LOC_Os02g48964.1	protein|WD-40 repeat family protein, putative, expressed	NA	NA	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005737|cytoplasm GO:0005834|heterotrimeric G-protein complex GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_04912	A	A1S	Potri.001G471900	Potri.001G471900(AS)	POPTR_0001s47590	sp|Q9S7N7|PSAG_ARATH	Photosystem I reaction center subunit V, chloroplastic OS=Arabidopsis thaliana GN=PSAG PE=1 SV=1	AT1G55670.1	| Symbols: PSAG | photosystem I subunit G | chr1:20802874-20803356 REVERSE LENGTH=160	LOC_Os09g30340.1	protein|photosystem I reaction center subunit, chloroplast precursor, putative, expressed	NA	NA	GO:0009773|photosynthetic electron transport in photosystem I GO:0009780|photosynthetic NADP+ reduction GO:0015979|photosynthesis GO:0019344|cysteine biosynthetic process GO:0030003|cellular cation homeostasis GO:0042550|photosystem I stabilization GO:0050821|protein stabilization GO:0070838|divalent metal ion transport	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009522|photosystem I GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009579|thylakoid GO:0009941|chloroplast envelope GO:0016020|membrane GO:0030093|chloroplast photosystem I
pt2_04913	A	A1S	Potri.001G472000	Potri.001G472000(AS)	POPTR_0001s47600	sp|Q8GXA4|WIP1_ARATH	WPP domain-interacting protein 1 OS=Arabidopsis thaliana GN=WIP1 PE=1 SV=1	AT4G26455.1	| Symbols: WIP1 | WPP domain interacting protein 1 | chr4:13365737-13367384 FORWARD LENGTH=489	LOC_Os09g30350.1	protein|expressed protein	NA	NA	GO:0006997|nucleus organization	GO:0005515|protein binding GO:0042803|protein homodimerization activity GO:0046982|protein heterodimerization activity	GO:0005634|nucleus GO:0005635|nuclear envelope GO:0009504|cell plate
pt2_04914	A	A1S	Potri.001G472200	Potri.001G472200(AS)	POPTR_0001s47610	NA	NA	AT5G56220.1	| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:22754871-22757792 FORWARD LENGTH=973	LOC_Os08g38970.1	protein|transmembrane receptor, putative, expressed	IMGA|contig_56634_1.1	Tir-nbs resistance protein contig_56634 1923-4892 H PREDN 20111014	NA	GO:0000166|nucleotide binding GO:0017111|nucleoside-triphosphatase activity GO:0043531|ADP binding	GO:0009507|chloroplast
pt2_04915	A	A2S	Potri.001G472300	Potri.001G472300(AS) Potri.T180700(BS)	POPTR_0001s47620	sp|Q9FH16|PR1G2_ARATH	PRA1 family protein G2 OS=Arabidopsis thaliana GN=PRA1G2 PE=2 SV=1	AT5G56230.1	| Symbols: PRA1.G2 | prenylated RAB acceptor 1.G2 | chr5:22758768-22759328 REVERSE LENGTH=186	NA	NA	NA	NA	GO:0016192|vesicle-mediated transport	GO:0003674|molecular_function	GO:0005783|endoplasmic reticulum GO:0009507|chloroplast
pt2_04916	A	A2S	Potri.001G472400	Potri.001G472400(AS) Potri.011G169100(DS)	POPTR_0001s47630	NA	NA	AT5G56250.1	| Symbols: HAP8 | hapless 8 | chr5:22768918-22771869 REVERSE LENGTH=811	LOC_Os04g39560.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	NA	GO:0005634|nucleus
pt2_04917	G	G1	NA	NA	POPTR_0001s47640	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04918	A	A1S	Potri.001G472600	Potri.001G472600(AS)	POPTR_0001s47650	sp|P0CB21|Y4645_ARATH	Uncharacterized protein At4g26450 OS=Arabidopsis thaliana GN=At4g26450 PE=4 SV=1	AT4G26450.1	| Symbols: | unknown protein; Has 614 Blast hits to 492 proteins in 137 species: Archae - 0; Bacteria - 94; Metazoa - 255; Fungi - 76; Plants - 69; Viruses - 0; Other Eukaryotes - 120 (source: NCBI BLink). | chr4:13362556-13364920 FORWARD LENGTH=708	NA	NA	NA	NA	NA	NA	GO:0005634|nucleus
pt2_04919	A	A1S	Potri.001G472700	Potri.001G472700(AS)	POPTR_0001s47660	sp|Q8RXR2|CLCF_ARATH	Chloride channel protein CLC-f OS=Arabidopsis thaliana GN=CLC-F PE=2 SV=2	AT1G55620.2	| Symbols: CLC-F, ATCLC-F | chloride channel F | chr1:20787338-20790990 REVERSE LENGTH=781	LOC_Os08g38980.1	protein|chloride transporter, chloride channel family, putative, expressed	IMGA|Medtr5g099290.1	Chloride channel protein CLC-e chr5 42494277-42499434 E EGN_Mt100125 20111014	GO:0006821|chloride transport GO:0055085|transmembrane transport	GO:0005216|ion channel activity GO:0005247|voltage-gated chloride channel activity	GO:0005794|Golgi apparatus GO:0009507|chloroplast GO:0016020|membrane
pt2_04920	A	A1S	Potri.001G472700	Potri.001G472700(AS)	POPTR_0001s47660	sp|Q8RXR2|CLCF_ARATH	Chloride channel protein CLC-f OS=Arabidopsis thaliana GN=CLC-F PE=2 SV=2	AT1G55620.2	| Symbols: CLC-F, ATCLC-F | chloride channel F | chr1:20787338-20790990 REVERSE LENGTH=781	LOC_Os08g38980.1	protein|chloride transporter, chloride channel family, putative, expressed	IMGA|Medtr5g099290.1	Chloride channel protein CLC-e chr5 42494277-42499434 E EGN_Mt100125 20111014	GO:0006821|chloride transport GO:0055085|transmembrane transport	GO:0005216|ion channel activity GO:0005247|voltage-gated chloride channel activity	GO:0005794|Golgi apparatus GO:0009507|chloroplast GO:0016020|membrane
pt2_04921	A	A1S	Potri.001G472800	Potri.001G472800(AS)	POPTR_0001s47670	sp|Q9FG77|WRKY2_ARATH	Probable WRKY transcription factor 2 OS=Arabidopsis thaliana GN=WRKY2 PE=2 SV=1	AT5G56270.1	| Symbols: WRKY2, ATWRKY2 | WRKY DNA-binding protein 2 | chr5:22780816-22783137 FORWARD LENGTH=687	LOC_Os08g38990.3	protein|WRKY30, expressed	IMGA|Medtr5g094430.1	WRKY transcription factor chr5 40230167-40234129 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009942|longitudinal axis specification	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_04922	A	A1S	Potri.001G472800	Potri.001G472800(AS)	POPTR_0001s47670	sp|Q9FG77|WRKY2_ARATH	Probable WRKY transcription factor 2 OS=Arabidopsis thaliana GN=WRKY2 PE=2 SV=1	AT5G56270.1	| Symbols: WRKY2, ATWRKY2 | WRKY DNA-binding protein 2 | chr5:22780816-22783137 FORWARD LENGTH=687	LOC_Os08g38990.3	protein|WRKY30, expressed	IMGA|Medtr5g094430.1	WRKY transcription factor chr5 40230167-40234129 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009942|longitudinal axis specification	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_04923	A	A1S	Potri.001G472800	Potri.001G472800(AS)	POPTR_0001s47670	sp|Q9FG77|WRKY2_ARATH	Probable WRKY transcription factor 2 OS=Arabidopsis thaliana GN=WRKY2 PE=2 SV=1	AT5G56270.1	| Symbols: WRKY2, ATWRKY2 | WRKY DNA-binding protein 2 | chr5:22780816-22783137 FORWARD LENGTH=687	LOC_Os08g38990.3	protein|WRKY30, expressed	IMGA|Medtr5g094430.1	WRKY transcription factor chr5 40230167-40234129 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009942|longitudinal axis specification	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_04924	A	A1S	Potri.001G472900	Potri.001G472900(AS)	POPTR_0001s47680	sp|Q9ZWC8|BRL1_ARATH	Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1	AT1G55610.2	| Symbols: BRL1 | BRI1 like | chr1:20779874-20783374 REVERSE LENGTH=1166	LOC_Os09g12240.1	protein|serine/threonine-protein kinase BRI1-like 1 precursor, putative, expressed	IMGA|Medtr5g045910.1	Receptor-like protein kinase chr5 19714325-19723568 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0009691|cytokinin biosynthetic process	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005515|protein binding GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_04925	G	G1	NA	NA	POPTR_0001s47690	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04926	A	A2S	Potri.001G473100	Potri.001G473100(AS) Potri.011G170000(DS)	POPTR_0001s47700	sp|Q9FMA3|PEX5_ARATH	Peroxisome biogenesis protein 5 OS=Arabidopsis thaliana GN=PEX5 PE=1 SV=1	AT5G56290.1	| Symbols: PEX5, ATPEX5 | peroxin 5 | chr5:22786655-22791972 FORWARD LENGTH=728	LOC_Os08g39080.1	protein|tetratricopeptide repeat domain containing protein, expressed	NA	NA	GO:0006625|protein targeting to peroxisome GO:0006635|fatty acid beta-oxidation GO:0006869|lipid transport GO:0006891|intra-Golgi vesicle-mediated transport GO:0009062|fatty acid catabolic process GO:0009733|response to auxin stimulus GO:0010351|lithium ion transport GO:0016558|protein import into peroxisome matrix	GO:0005052|peroxisome matrix targeting signal-1 binding GO:0005515|protein binding	GO:0005634|nucleus GO:0005778|peroxisomal membrane GO:0005829|cytosol
pt2_04927	G	G1	NA	NA	POPTR_0001s47710	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04928	A	A3S	Potri.001G473200	Potri.001G473200(AS) Potri.012G020200(DS) Potri.015G008300(DS)	POPTR_0001s47720	sp|Q9ZWC5|SCL18_ARATH	Scarecrow-like protein 18 OS=Arabidopsis thaliana GN=SCL18 PE=2 SV=1	AT1G55580.1	| Symbols: LAS, SCL18 | GRAS family transcription factor | chr1:20764106-20765443 FORWARD LENGTH=445	LOC_Os02g10360.1	protein|MONOCULM 1, putative, expressed	IMGA|contig_52215_1.1	GAI-like protein contig_52215 101-2211 F PREDN 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0010223|secondary shoot formation	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_04929	A	A1S	Potri.001G473300	Potri.001G473300(AS)	POPTR_0001s47730	sp|Q6ZKL8|P2C66_ORYSJ	Probable protein phosphatase 2C 66 OS=Oryza sativa subsp. japonica GN=Os08g0500300 PE=2 SV=1	AT1G16220.1	| Symbols: | Protein phosphatase 2C family protein | chr1:5548653-5550553 FORWARD LENGTH=491	LOC_Os08g39100.1	protein|protein phosphatase 2C, putative, expressed	IMGA|Medtr5g009370.1	Protein phosphatase 2C chr5 1985761-1987219 E EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation	GO:0003824|catalytic activity GO:0004722|protein serine/threonine phosphatase activity	GO:0005886|plasma membrane
pt2_04930	B	B1S	Potri.008G001900	Potri.008G001900(BS)	POPTR_0001s47740	NA	NA	AT2G01050.1	| Symbols: | zinc ion binding;nucleic acid binding | chr2:68337-69884 REVERSE LENGTH=515	LOC_Os07g32690.1	protein|retrotransposon protein, putative, unclassified, expressed	IMGA|Medtr5g062140.1	hypothetical protein chr5 25005759-25007108 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003676|nucleic acid binding GO:0008270|zinc ion binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04931	A	A1S	Potri.001G428500	Potri.001G428500(AS)	POPTR_0001s47750	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04932	C	C1S	Potri.001G428300	Potri.001G428300(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04933	A	A13S	Potri.001G428200	Potri.001G428200(AS) Potri.T066300(DS) Potri.001G427500(DS) Potri.001G427700(DS) Potri.001G429100(DS) Potri.001G425500(DS) Potri.T115300(DS) Potri.001G422800(DS) Potri.T100500(DS) Potri.001G422900(DS) Potri.001G428100(DS) Potri.001G432700(DS) Potri.T065900(DS)	POPTR_0001s47763	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04934	G	G4	NA	NA	POPTR_0001s47766	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04935	C	C1S	Potri.001G428100	Potri.001G428100(CS)	sp|Q9T048|DRL27_ARATH	Disease resistance protein At4g27190 OS=Arabidopsis thaliana GN=At4g27190 PE=2 SV=1	AT4G27190.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr4:13620977-13623934 REVERSE LENGTH=985	LOC_Os01g57870.1	protein|disease resistance protein RPS2, putative, expressed	IMGA|Medtr1g041550.1	Cc-nbs resistance protein chr1 11650158-11644067 E EGN_Mt100125 20111014	GO:0006952|defense response	GO:0000166|nucleotide binding GO:0017111|nucleoside-triphosphatase activity GO:0043531|ADP binding	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_04936	A	A1S	Potri.001G427900	Potri.001G427900(AS)	POPTR_0001s47790	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04937	A	A4S	Potri.001G427700	Potri.001G427700(AS) Potri.T065800(DS) Potri.001G428800(DS) Potri.001G428200(DS)	POPTR_0001s47800	sp|Q9T048|DRL27_ARATH	Disease resistance protein At4g27190 OS=Arabidopsis thaliana GN=At4g27190 PE=2 SV=1	AT4G27190.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr4:13620977-13623934 REVERSE LENGTH=985	LOC_Os01g72680.1	protein|disease resistance protein RPS2, putative, expressed	IMGA|Medtr1g041550.1	Cc-nbs resistance protein chr1 11650158-11644067 E EGN_Mt100125 20111014	GO:0006952|defense response	GO:0000166|nucleotide binding GO:0017111|nucleoside-triphosphatase activity GO:0043531|ADP binding	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_04938	A	A1S	Potri.001G427700	Potri.001G427700(AS)	POPTR_0001s47810	sp|Q9T048|DRL27_ARATH	Disease resistance protein At4g27190 OS=Arabidopsis thaliana GN=At4g27190 PE=2 SV=1	AT4G27190.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr4:13620977-13623934 REVERSE LENGTH=985	LOC_Os01g72680.1	protein|disease resistance protein RPS2, putative, expressed	IMGA|Medtr1g041550.1	Cc-nbs resistance protein chr1 11650158-11644067 E EGN_Mt100125 20111014	GO:0006952|defense response	GO:0000166|nucleotide binding GO:0017111|nucleoside-triphosphatase activity GO:0043531|ADP binding	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_04939	A	A5S	Potri.001G427600	Potri.001G427600(AS) Potri.001G426200(AS) Potri.001G433700(BS) Potri.T100800(DS) Potri.T065900(DS)	POPTR_0001s47815	sp|Q9T048|DRL27_ARATH	Disease resistance protein At4g27190 OS=Arabidopsis thaliana GN=At4g27190 PE=2 SV=1	AT4G27190.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr4:13620977-13623934 REVERSE LENGTH=985	LOC_Os01g72680.1	protein|disease resistance protein RPS2, putative, expressed	IMGA|Medtr1g041550.1	Cc-nbs resistance protein chr1 11650158-11644067 E EGN_Mt100125 20111014	GO:0006952|defense response	GO:0000166|nucleotide binding GO:0017111|nucleoside-triphosphatase activity GO:0043531|ADP binding	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_04940	A	A9S	Potri.T115300	Potri.T115300(AS) Potri.T100500(AS) Potri.T065900(AS) Potri.001G427500(BS) Potri.001G429100(BS) Potri.001G422800(BS) Potri.001G427600(DS) Potri.001G422900(DS) Potri.001G426900(DS)	POPTR_0001s47820	NA	NA	NA	NA	NA	NA	IMGA|Medtr5g085400.1	Cc-nbs-lrr resistance protein chr5 35906400-35914135 H EGN_Mt100125 20111014	GO:0006952|defense response	GO:0043531|ADP binding	GO:0005634|nucleus
pt2_04941	R	R	NA	NA	POPTR_0001s47840	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04942	C	C9S	Potri.005G014100	Potri.005G014100(CS) Potri.005G014200(CS) Potri.005G014000(CS) Potri.005G014600(CS) Potri.005G013800(CS) Potri.005G013900(CS) Potri.005G014500(CA) Potri.005G014400(CA) Potri.005G014300(CA)	sp|Q68FQ7|RPAP3_RAT	RNA polymerase II-associated protein 3 OS=Rattus norvegicus GN=Rpap3 PE=2 SV=1	AT1G56440.1	| Symbols: TPR5 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:21138765-21141482 REVERSE LENGTH=476	LOC_Os05g03910.1	protein|RNA polymerase II-associated protein 3, putative, expressed	IMGA|Medtr5g012030.1	Stress-induced-phosphoprotein chr5 3312809-3308439 F EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_04943	A	A2S	Potri.005G013700	Potri.005G013700(AS) Potri.005G016700(AS)	POPTR_0001s47860	sp|Q9FIZ3|GSO2_ARATH	LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana GN=GSO2 PE=2 SV=2	AT5G49290.1	| Symbols: ATRLP56, RLP56 | receptor like protein 56 | chr5:19980195-19983869 FORWARD LENGTH=908	LOC_Os02g41890.1	protein|phytosulfokine receptor precursor, putative, expressed	IMGA|contig_105868_1.1	Leucine-rich repeat receptor-like protein kinase PEPR2 contig_105868 1323-347 H PREDN 20111014	GO:0006468|protein phosphorylation GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway GO:0009611|response to wounding	GO:0001653|peptide receptor activity GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_04944	G	G1	NA	NA	POPTR_0001s47880	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04945	D	D1S	Potri.001G422700	Potri.001G422700(DS)	POPTR_0001s47890	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04946	A	A1S	Potri.002G000100	Potri.002G000100(AS)	POPTR_0002s00200	sp|Q9MA15|Y1960_ARATH	Uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic OS=Arabidopsis thaliana GN=At1g79600 PE=1 SV=1	AT1G79600.1	| Symbols: | Protein kinase superfamily protein | chr1:29950105-29952516 REVERSE LENGTH=711	LOC_Os05g25840.3	protein| ELMO/CED-12 family protein, putative, expressed	IMGA|contig_75251_1.1	Possible protein kinase ABC1 family protein contig_75251 433-1707 E PREDN 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane GO:0009507|chloroplast GO:0010287|plastoglobule
pt2_04947	A	A1S	Potri.002G000200	Potri.002G000200(AS)	POPTR_0002s00210	sp|Q76P23|PM34_DICDI	Mitochondrial substrate carrier family protein Q OS=Dictyostelium discoideum GN=mcfQ PE=2 SV=1	AT2G39970.1	| Symbols: | Mitochondrial substrate carrier family protein | chr2:16684026-16686392 REVERSE LENGTH=331	LOC_Os09g33470.1	protein|mitochondrial carrier protein, putative, expressed	IMGA|Medtr5g081910.1	Peroxisomal membrane protein chr5 34128045-34122097 F EGN_Mt100125 20111014	GO:0006635|fatty acid beta-oxidation GO:0006810|transport GO:0043132|NAD transport GO:0044375|regulation of peroxisome size	NA	GO:0005739|mitochondrion GO:0005743|mitochondrial inner membrane GO:0005774|vacuolar membrane GO:0005777|peroxisome GO:0005778|peroxisomal membrane
pt2_04948	A	A1S	Potri.002G000300	Potri.002G000300(AS)	POPTR_0002s00230	sp|Q8GYX8|DNJ10_ARATH	Chaperone protein dnaJ 10 OS=Arabidopsis thaliana GN=ATJ10 PE=2 SV=2	AT1G21080.1	| Symbols: | DNAJ heat shock N-terminal domain-containing protein | chr1:7378822-7382275 REVERSE LENGTH=391	LOC_Os08g41110.1	protein|chaperone protein dnaJ 10, putative, expressed	IMGA|Medtr5g035770.1	Chaperone protein dnaJ chr5 15132063-15127235 F EGN_Mt100125 20111014	GO:0006457|protein folding GO:0030968|endoplasmic reticulum unfolded protein response GO:0048193|Golgi vesicle transport GO:0048527|lateral root development	GO:0031072|heat shock protein binding GO:0051082|unfolded protein binding	GO:0005737|cytoplasm GO:0005794|Golgi apparatus
pt2_04949	A	A1S	Potri.002G000400	Potri.002G000400(AS)	POPTR_0002s00270	NA	NA	NA	NA	NA	NA	IMGA|Medtr5g019260.1	hypothetical protein chr5 7016945-7017415 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003676|nucleic acid binding	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_04950	A	A1S	Potri.002G000500	Potri.002G000500(AS)	POPTR_0002s00280	sp|Q9SRE4|UGAL2_ARATH	UDP-galactose transporter 2 OS=Arabidopsis thaliana GN=UDP-GALT2 PE=2 SV=1	AT1G76670.1	| Symbols: | Nucleotide-sugar transporter family protein | chr1:28772890-28774569 REVERSE LENGTH=347	LOC_Os07g39280.1	protein|transporter-related, putative, expressed	IMGA|Medtr5g096310.1	Solute carrier family 35 member E3 chr5 41077330-41074635 E EGN_Mt100125 20111014	GO:0006863|purine nucleobase transport GO:0009624|response to nematode GO:0015783|GDP-fucose transport GO:0015786|UDP-glucose transport GO:0072334|UDP-galactose transmembrane transport	GO:0005457|GDP-fucose transmembrane transporter activity GO:0005459|UDP-galactose transmembrane transporter activity GO:0005460|UDP-glucose transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_04951	A	A1S	Potri.002G000600	Potri.002G000600(AS)	POPTR_0002s00290	NA	NA	AT1G43040.1	| Symbols: | SAUR-like auxin-responsive protein family | chr1:16184209-16184523 FORWARD LENGTH=104	LOC_Os04g56680.1	protein|OsSAUR22 - Auxin-responsive SAUR gene family member, expressed	IMGA|contig_93481_1.1	Auxin-induced protein-like protein contig_93481 919-105 F PREDN 20111014	GO:0009733|response to auxin stimulus	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_04952	B	B1S	Potri.002G000700	Potri.002G000700(BS)	POPTR_0002s00300	sp|Q6NKW9|E138_ARATH	Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis thaliana GN=At1g64760 PE=1 SV=2	AT2G19440.1	| Symbols: | O-Glycosyl hydrolases family 17 protein | chr2:8418164-8419806 REVERSE LENGTH=478	LOC_Os06g39060.1	protein|glucan endo-1,3-beta-glucosidase precursor, putative, expressed	NA	NA	GO:0005975|carbohydrate metabolic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0043169|cation binding	GO:0005886|plasma membrane GO:0031225|anchored to membrane
pt2_04953	A	A1S	Potri.002G000800	Potri.002G000800(AS)	POPTR_0002s00310	NA	NA	AT5G25070.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:8641261-8643471 REVERSE LENGTH=736	LOC_Os08g40450.1	protein|uvrB/uvrC motif family protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_04954	A	A1S	Potri.002G001000	Potri.002G001000(AS)	POPTR_0002s00320	sp|Q08D57|SET1B_XENTR	Histone-lysine N-methyltransferase SETD1B OS=Xenopus tropicalis GN=setd1b PE=2 SV=1	AT5G42400.1	| Symbols: ATXR7, SDG25 | SET domain protein 25 | chr5:16954469-16960671 REVERSE LENGTH=1423	LOC_Os12g41900.1	protein|SET domain containing protein, expressed	IMGA|Medtr1g097760.1	Histone-lysine N-methyltransferase NSD3 chr1 27951022-27958584 H EGN_Mt100125 20111014	GO:0009909|regulation of flower development GO:0010228|vegetative to reproductive phase transition of meristem GO:0010452|histone H3-K36 methylation GO:0051568|histone H3-K4 methylation	NA	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_04955	A	A1S	Potri.002G001100	Potri.002G001100(AS)	POPTR_0002s00330	sp|Q9SRE5|Y1666_ARATH	Uncharacterized protein At1g76660 OS=Arabidopsis thaliana GN=At1g76660 PE=1 SV=1	AT1G76660.1	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT5G52430.1); Has 353 Blast hits to 231 proteins in 60 species: Archae - 0; Bacteria - 6; Metazoa - 57; Fungi - 22; Plants - 125; Viruses - 4; Other Eukaryotes - 139 (source: NCBI BLink). | chr1:28769157-28771036 REVERSE LENGTH=431	LOC_Os01g01390.3	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_04956	G	G1	NA	NA	POPTR_0002s00340	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04957	A	A1S	Potri.002G001400	Potri.002G001400(AS)	POPTR_0002s00350	sp|Q9FIH9|CML37_ARATH	Calcium-binding protein CML37 OS=Arabidopsis thaliana GN=CML37 PE=2 SV=1	AT5G42380.1	| Symbols: CML39, CML37 | calmodulin like 37 | chr5:16942758-16943315 REVERSE LENGTH=185	LOC_Os01g72530.1	protein|OsCML31 - Calmodulin-related calcium sensor protein, expressed	IMGA|Medtr5g079340.1	Polcalcin Nic t chr5 32914810-32913864 F EGN_Mt100125 20111014	GO:0009693|ethylene biosynthetic process GO:0010193|response to ozone GO:0010286|heat acclimation GO:0030968|endoplasmic reticulum unfolded protein response GO:0052542|defense response by callose deposition	GO:0005509|calcium ion binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_04958	A	A1S	Potri.002G001500	Potri.002G001500(AS)	POPTR_0002s00360	sp|P0AF48|YJBQ_ECOLI	UPF0047 protein yjbQ OS=Escherichia coli (strain K12) GN=yjbQ PE=3 SV=1	AT1G21065.1	| Symbols: | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0047 (InterPro:IPR001602); Has 3800 Blast hits to 3784 proteins in 1137 species: Archae - 215; Bacteria - 2154; Metazoa - 42; Fungi - 99; Plants - 99; Viruses - 0; Other Eukaryotes - 1191 (source: NCBI BLink). | chr1:7374210-7375644 FORWARD LENGTH=217	LOC_Os02g09460.1	protein|GA16396-PA, putative, expressed	NA	NA	GO:0008150|biological_process	NA	GO:0009507|chloroplast
pt2_04959	A	A1S	Potri.002G001500	Potri.002G001500(AS)	POPTR_0002s00360	sp|P0AF48|YJBQ_ECOLI	UPF0047 protein yjbQ OS=Escherichia coli (strain K12) GN=yjbQ PE=3 SV=1	AT1G21065.1	| Symbols: | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0047 (InterPro:IPR001602); Has 3800 Blast hits to 3784 proteins in 1137 species: Archae - 215; Bacteria - 2154; Metazoa - 42; Fungi - 99; Plants - 99; Viruses - 0; Other Eukaryotes - 1191 (source: NCBI BLink). | chr1:7374210-7375644 FORWARD LENGTH=217	LOC_Os02g09460.1	protein|GA16396-PA, putative, expressed	NA	NA	GO:0008150|biological_process	NA	GO:0009507|chloroplast
pt2_04960	A	A1S	Potri.002G001500	Potri.002G001500(AS)	POPTR_0002s00360	sp|P0AF48|YJBQ_ECOLI	UPF0047 protein yjbQ OS=Escherichia coli (strain K12) GN=yjbQ PE=3 SV=1	AT1G21065.1	| Symbols: | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0047 (InterPro:IPR001602); Has 3800 Blast hits to 3784 proteins in 1137 species: Archae - 215; Bacteria - 2154; Metazoa - 42; Fungi - 99; Plants - 99; Viruses - 0; Other Eukaryotes - 1191 (source: NCBI BLink). | chr1:7374210-7375644 FORWARD LENGTH=217	LOC_Os02g09460.1	protein|GA16396-PA, putative, expressed	NA	NA	GO:0008150|biological_process	NA	GO:0009507|chloroplast
pt2_04961	A	A2S	Potri.002G001600	Potri.002G001600(AS) Potri.005G259600(DS)	POPTR_0002s00370	sp|Q9LFV3|Y5157_ARATH	Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At5g15730 OS=Arabidopsis thaliana GN=At5g15730 PE=2 SV=1	AT2G33580.1	| Symbols: | Protein kinase superfamily protein | chr2:14219848-14221842 REVERSE LENGTH=664	LOC_Os02g09960.1	protein|LYK8, putative, expressed	IMGA|Medtr5g085790.1	Wall-associated receptor kinase-like protein chr5 36049307-36053113 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0010200|response to chitin GO:0016998|cell wall macromolecule catabolic process	GO:0008061|chitin binding GO:0016301|kinase activity	GO:0005576|extracellular region GO:0005886|plasma membrane
pt2_04962	A	A1S	Potri.002G001700	Potri.002G001700(AS)	POPTR_0002s00380	sp|Q6DFB8|TTC37_XENLA	Tetratricopeptide repeat protein 37 OS=Xenopus laevis GN=ttc37 PE=2 SV=1	AT1G76630.2	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:28759699-28765042 FORWARD LENGTH=1168	NA	NA	NA	NA	GO:0006346|methylation-dependent chromatin silencing GO:0008150|biological_process GO:0016246|RNA interference	NA	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_04963	A	A1S	Potri.002G001800	Potri.002G001800(AS)	POPTR_0002s00390	sp|Q8LEZ8|AP1S1_ARATH	AP-1 complex subunit sigma-1 OS=Arabidopsis thaliana GN=AAP19-1 PE=2 SV=1	AT2G17380.1	| Symbols: AP19 | associated protein 19 | chr2:7553122-7554887 FORWARD LENGTH=161	LOC_Os03g57040.1	protein|clathrin adaptor complex small chain domain containing protein, expressed	IMGA|Medtr5g098940.1	Clathrin assembly small subunit protein AP19 chr5 42277463-42274758 F EGN_Mt100125 20111014	GO:0006301|postreplication repair GO:0006810|transport GO:0006886|intracellular protein transport GO:0015031|protein transport GO:0016192|vesicle-mediated transport	GO:0008565|protein transporter activity	GO:0005794|Golgi apparatus GO:0030117|membrane coat GO:0030125|clathrin vesicle coat
pt2_04964	A	A1S	Potri.002G001900	Potri.002G001900(AS)	POPTR_0002s00400	NA	NA	AT1G76620.1	| Symbols: | Protein of unknown function, DUF547 | chr1:28756787-28759131 FORWARD LENGTH=527	LOC_Os09g32010.1	protein|ternary complex factor MIP1, putative, expressed	IMGA|Medtr5g018820.2	hypothetical protein chr5 6771399-6767421 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_04965	A	A1S	Potri.002G002000	Potri.002G002000(AS)	POPTR_0002s00410	NA	NA	AT1G21050.1	| Symbols: | Protein of unknown function, DUF617 | chr1:7366859-7367596 FORWARD LENGTH=245	LOC_Os02g47980.1	protein|DUF617 domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04966	A	A1S	Potri.002G002100	Potri.002G002100(AS)	POPTR_0002s00420	NA	NA	AT1G21010.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76600.1); Has 206 Blast hits to 206 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:7346239-7346871 FORWARD LENGTH=210	LOC_Os02g09970.1	protein|expressed protein	IMGA|Medtr5g018720.1	hypothetical protein chr5 6734941-6735622 E EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0015824|proline transport	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_04967	A	A2S	Potri.002G002200	Potri.002G002200(AS) Potri.005G259000(DS)	POPTR_0002s00430	NA	NA	AT1G21000.2	| Symbols: | PLATZ transcription factor family protein | chr1:7338013-7339088 FORWARD LENGTH=243	LOC_Os06g41930.2	protein|zinc-binding protein, putative, expressed	IMGA|Medtr5g030130.1	hypothetical protein chr5 12420913-12419244 F EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005739|mitochondrion
pt2_04968	A	A1S	Potri.002G002400	Potri.002G002400(AS)	POPTR_0002s00440	sp|Q8RY95|SPL14_ARATH	Squamosa promoter-binding-like protein 14 OS=Arabidopsis thaliana GN=SPL14 PE=2 SV=3	AT1G20980.1	| Symbols: SPL14, FBR6, SPL1R2, ATSPL14 | squamosa promoter binding protein-like 14 | chr1:7325042-7328933 FORWARD LENGTH=1035	LOC_Os08g40260.1	protein|OsSPL15 - SBP-box gene family member, expressed	IMGA|Medtr1g035010.1	Squamosa promoter binding-like protein chr1 9713109-9707112 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0042742|defense response to bacterium GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_04969	A	A1S	Potri.002G002600	Potri.002G002600(AS)	POPTR_0002s00450	NA	NA	AT1G20960.2	| Symbols: emb1507 | U5 small nuclear ribonucleoprotein helicase, putative | chr1:7302591-7309914 REVERSE LENGTH=2171	NA	NA	NA	NA	GO:0006259|DNA metabolic process GO:0007126|meiosis GO:0009165|nucleotide biosynthetic process GO:0009793|embryo development ending in seed dormancy GO:0033044|regulation of chromosome organization	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0004386|helicase activity GO:0005524|ATP binding GO:0008026|ATP-dependent helicase activity GO:0017111|nucleoside-triphosphatase activity	GO:0005634|nucleus GO:0005730|nucleolus GO:0005829|cytosol GO:0016020|membrane
pt2_04970	A	A1S	Potri.002G002700	Potri.002G002700(AS)	POPTR_0002s00460	sp|Q9C9K2|CP123_ARATH	Calvin cycle protein CP12-3, chloroplastic OS=Arabidopsis thaliana GN=CP12-3 PE=1 SV=1	AT1G76560.1	| Symbols: CP12-3 | CP12 domain-containing protein 3 | chr1:28728285-28728689 FORWARD LENGTH=134	LOC_Os08g40240.1	protein|calvin cycle protein CP12, putative, expressed	IMGA|Medtr1g087030.1	Calvin cycle protein CP12 chr1 23311845-23312564 F EGN_Mt100125 20111014	GO:0034605|cellular response to heat GO:0071454|cellular response to anoxia GO:0080153|negative regulation of reductive pentose-phosphate cycle	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0043234|protein complex
pt2_04971	A	A1S	Potri.002G002900	Potri.002G002900(AS)	POPTR_0002s00470	sp|Q54CV5|BUB1_DICDI	Probable inactive serine/threonine-protein kinase bub1 OS=Dictyostelium discoideum GN=bub1 PE=3 SV=1	AT2G33560.1	| Symbols: BUBR1 | BUB1-related (BUB1: budding uninhibited by benzymidazol 1) | chr2:14213810-14215918 REVERSE LENGTH=395	LOC_Os02g10020.1	protein|Mad3/BUB1 homology region 1 domain containing protein, expressed	NA	NA	GO:0000226|microtubule cytoskeleton organization GO:0006270|DNA replication initiation GO:0006275|regulation of DNA replication GO:0007094|mitotic cell cycle spindle assembly checkpoint GO:0008283|cell proliferation GO:0048451|petal formation GO:0048453|sepal formation GO:0051726|regulation of cell cycle	GO:0005515|protein binding	GO:0000776|kinetochore GO:0005634|nucleus GO:0010369|chromocenter
pt2_04972	A	A1S	Potri.002G003000	Potri.002G003000(AS)	POPTR_0002s00480	sp|Q9FMY5|U2AFB_ARATH	Splicing factor U2af small subunit B OS=Arabidopsis thaliana GN=U2AF35B PE=2 SV=1	AT5G42820.1	| Symbols: ATU2AF35B, U2AF35B | Zinc finger C-x8-C-x5-C-x3-H type family protein | chr5:17170445-17171296 REVERSE LENGTH=283	LOC_Os05g48960.1	protein|splicing factor U2AF, putative, expressed	NA	NA	GO:0009640|photomorphogenesis GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009909|regulation of flower development GO:0009933|meristem structural organization GO:0010162|seed dormancy process GO:0010182|sugar mediated signaling pathway GO:0010228|vegetative to reproductive phase transition of meristem GO:0016567|protein ubiquitination GO:0019915|lipid storage GO:0048573|photoperiodism, flowering GO:0050826|response to freezing	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_04973	A	A1S	Potri.002G003100	Potri.002G003100(AS)	POPTR_0002s00490	sp|Q41140|PFPA_RICCO	Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Ricinus communis GN=PFP-ALPHA PE=3 SV=1	AT1G76550.1	| Symbols: | Phosphofructokinase family protein | chr1:28722900-28726929 REVERSE LENGTH=617	LOC_Os02g48360.1	protein|pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed	NA	NA	GO:0006084|acetyl-CoA metabolic process GO:0006096|glycolysis GO:0006342|chromatin silencing GO:0009744|response to sucrose stimulus GO:0009749|response to glucose stimulus GO:0009750|response to fructose stimulus GO:0015979|photosynthesis GO:0016126|sterol biosynthetic process GO:0016132|brassinosteroid biosynthetic process GO:0051567|histone H3-K9 methylation	GO:0003872|6-phosphofructokinase activity GO:0005524|ATP binding GO:0047334|diphosphate-fructose-6-phosphate 1-phosphotransferase activity	GO:0005737|cytoplasm GO:0005829|cytosol GO:0005945|6-phosphofructokinase complex GO:0010317|pyrophosphate-dependent phosphofructokinase complex, alpha-subunit complex
pt2_04974	A	A2S	Potri.002G003200	Potri.002G003200(AS) Potri.005G257700(DS)	POPTR_0002s00500	sp|Q9SAH9|CCR2_ARATH	Cinnamoyl-CoA reductase 2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1	AT2G33590.1	| Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr2:14224622-14226365 FORWARD LENGTH=321	LOC_Os06g41810.1	protein|reductase, putative, expressed	IMGA|Medtr5g072620.1	Dihydroflavonol 4-reductase-like protein chr5 29922618-29926018 E EGN_Mt100125 20111014	GO:0009809|lignin biosynthetic process GO:0044237|cellular metabolic process GO:0046686|response to cadmium ion	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0016621|cinnamoyl-CoA reductase activity GO:0050662|coenzyme binding	GO:0005575|cellular_component
pt2_04975	A	A2S	Potri.002G003300	Potri.002G003300(AS) Potri.002G004900(DS)	POPTR_0002s00510	sp|O64798|Y1747_ARATH	Inactive serine/threonine-protein kinase At1g67470 OS=Arabidopsis thaliana GN=At1g67470 PE=2 SV=1	AT3G57710.1	| Symbols: | Protein kinase superfamily protein | chr3:21386233-21387288 REVERSE LENGTH=351	LOC_Os04g51050.2	protein|OsWAK53b - OsWAK receptor-like protein kinase, expressed	IMGA|Medtr5g018570.1	Kinase-like protein chr5 6674294-6679204 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus
pt2_04976	A	A1S	Potri.002G003400	Potri.002G003400(AS)	POPTR_0002s00520	sp|Q8LF80|CKB21_ARATH	Cyclin-dependent kinase B2-1 OS=Arabidopsis thaliana GN=CDKB2-1 PE=1 SV=2	AT1G76540.1	| Symbols: CDKB2;1 | cyclin-dependent kinase B2;1 | chr1:28720554-28722351 REVERSE LENGTH=313	LOC_Os08g40170.1	protein|cyclin-dependent kinase B2-1, putative, expressed	IMGA|Medtr5g008860.1	hypothetical protein chr5 1727811-1731359 H EGN_Mt100125 20111014	GO:0000226|microtubule cytoskeleton organization GO:0000280|nuclear division GO:0006275|regulation of DNA replication GO:0006342|chromatin silencing GO:0006468|protein phosphorylation GO:0008283|cell proliferation GO:0009755|hormone-mediated signaling pathway GO:0009934|regulation of meristem structural organization GO:0010389|regulation of G2/M transition of mitotic cell cycle GO:0010440|stomatal lineage progression GO:0010583|response to cyclopentenone GO:0016572|histone phosphorylation GO:0042023|DNA endoreduplication GO:0045736|negative regulation of cyclin-dependent protein kinase activity GO:0051225|spindle assembly GO:0051567|histone H3-K9 methylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004693|cyclin-dependent protein kinase activity GO:0005515|protein binding GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0000307|cyclin-dependent protein kinase holoenzyme complex GO:0005634|nucleus
pt2_04977	A	A1S	Potri.002G003500	Potri.002G003500(AS)	POPTR_0002s00530	NA	NA	AT1G20925.1	| Symbols: | Auxin efflux carrier family protein | chr1:7289973-7292507 FORWARD LENGTH=472	LOC_Os09g31478.1	protein|auxin efflux carrier component, putative, expressed	IMGA|Medtr5g024970.1	Auxin efflux carrier protein chr5 9837511-9840517 F EGN_Mt100125 20111014	GO:0009926|auxin polar transport GO:0055085|transmembrane transport	GO:0009672|auxin:hydrogen symporter activity	GO:0016021|integral to membrane
pt2_04978	A	A1S	Potri.002G003600	Potri.002G003600(AS)	POPTR_0002s00540	sp|Q8H0U8|RH42_ARATH	DEAD-box ATP-dependent RNA helicase 42 OS=Arabidopsis thaliana GN=RH42 PE=1 SV=2	AT1G20920.1	| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:7285342-7288842 FORWARD LENGTH=1166	LOC_Os08g06344.3	protein|transposon protein, putative, CACTA, En/Spm sub-class, expressed	IMGA|contig_74166_1.1	ATP dependent RNA helicase contig_74166 1-4555 F PREDN 20111014	NA	GO:0003676|nucleic acid binding GO:0004386|helicase activity GO:0005524|ATP binding GO:0008026|ATP-dependent helicase activity	GO:0005634|nucleus
pt2_04979	A	A1S	Potri.002G003700	Potri.002G003700(AS)	POPTR_0002s00550	sp|Q0WNR6|ARID5_ARATH	AT-rich interactive domain-containing protein 5 OS=Arabidopsis thaliana GN=ARID5 PE=2 SV=1	AT1G76510.2	| Symbols: | ARID/BRIGHT DNA-binding domain-containing protein | chr1:28708927-28712498 REVERSE LENGTH=434	LOC_Os06g41730.2	protein|ARID/BRIGHT DNA-binding domain-containing protein, putative, expressed	IMGA|Medtr5g024920.1	AT-rich interactive domain-containing protein chr5 9825994-9819069 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009560|embryo sac egg cell differentiation GO:0043687|post-translational protein modification GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005622|intracellular GO:0005634|nucleus
pt2_04980	A	A1S	Potri.002G003800	Potri.002G003800(AS)	POPTR_0002s00560	sp|Q9S7C9|ESCA_ARATH	Putative DNA-binding protein ESCAROLA OS=Arabidopsis thaliana GN=ESC PE=2 SV=1	AT1G76500.1	| Symbols: SOB3, AHL29 | Predicted AT-hook DNA-binding family protein | chr1:28705532-28706440 FORWARD LENGTH=302	LOC_Os02g48320.3	protein|DNA binding protein, putative, expressed	IMGA|contig_74397_1.1	AT-hook motif nuclear localized protein contig_74397 1922-494 F PREDN 20111014	GO:0009640|photomorphogenesis GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009909|regulation of flower development GO:0009933|meristem structural organization GO:0010162|seed dormancy process GO:0010182|sugar mediated signaling pathway GO:0010228|vegetative to reproductive phase transition of meristem GO:0016567|protein ubiquitination GO:0019915|lipid storage GO:0050826|response to freezing	GO:0003677|DNA binding	NA
pt2_04981	B	B1S	Potri.002G004000	Potri.002G004000(BS)	POPTR_0002s00570	sp|P29057|HMDH1_HEVBR	3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 OS=Hevea brasiliensis GN=HMGR1 PE=2 SV=1	AT1G76490.1	| Symbols: HMG1, HMGR1, AtHMGR1 | hydroxy methylglutaryl CoA reductase 1 | chr1:28695801-28698206 FORWARD LENGTH=642	LOC_Os08g40180.1	protein|3-hydroxy-3-methylglutaryl-coenzyme A reductase, putative, expressed	IMGA|Medtr5g087550.1	3-hydroxy-3-methylglutaryl coenzyme A reductase chr5 36935964-36939680 E EGN_Mt100125 20111014	GO:0006816|calcium ion transport GO:0007030|Golgi organization GO:0007033|vacuole organization GO:0008299|isoprenoid biosynthetic process GO:0009611|response to wounding GO:0009651|response to salt stress GO:0009805|coumarin biosynthetic process GO:0015936|coenzyme A metabolic process GO:0016126|sterol biosynthetic process GO:0019287|isopentenyl diphosphate biosynthetic process, mevalonate pathway GO:0055114|oxidation-reduction process GO:0060964|regulation of gene silencing by miRNA	GO:0004420|hydroxymethylglutaryl-CoA reductase (NADPH) activity GO:0005515|protein binding GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0042282|hydroxymethylglutaryl-CoA reductase activity GO:0050661|NADP binding GO:0050662|coenzyme binding	GO:0005783|endoplasmic reticulum GO:0005789|endoplasmic reticulum membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_04982	A	A2S	Potri.002G004100	Potri.002G004100(AS) Potri.005G257700(DS)	POPTR_0002s00580	sp|Q9SAH9|CCR2_ARATH	Cinnamoyl-CoA reductase 2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1	AT2G33590.1	| Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr2:14224622-14226365 FORWARD LENGTH=321	LOC_Os06g41810.1	protein|reductase, putative, expressed	IMGA|Medtr5g072620.1	Dihydroflavonol 4-reductase-like protein chr5 29922618-29926018 E EGN_Mt100125 20111014	GO:0009809|lignin biosynthetic process GO:0044237|cellular metabolic process GO:0046686|response to cadmium ion	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0016621|cinnamoyl-CoA reductase activity GO:0050662|coenzyme binding	GO:0005575|cellular_component
pt2_04983	A	A1S	Potri.002G004100	Potri.002G004100(AS)	POPTR_0002s00580	sp|Q9SAH9|CCR2_ARATH	Cinnamoyl-CoA reductase 2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1	AT2G33590.1	| Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr2:14224622-14226365 FORWARD LENGTH=321	LOC_Os06g41810.1	protein|reductase, putative, expressed	IMGA|Medtr5g072620.1	Dihydroflavonol 4-reductase-like protein chr5 29922618-29926018 E EGN_Mt100125 20111014	GO:0009809|lignin biosynthetic process GO:0044237|cellular metabolic process GO:0046686|response to cadmium ion	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0016621|cinnamoyl-CoA reductase activity GO:0050662|coenzyme binding	GO:0005575|cellular_component
pt2_04984	A	A1S	Potri.002G004100	Potri.002G004100(AS)	POPTR_0002s00580	sp|Q9SAH9|CCR2_ARATH	Cinnamoyl-CoA reductase 2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1	AT2G33590.1	| Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr2:14224622-14226365 FORWARD LENGTH=321	LOC_Os06g41810.1	protein|reductase, putative, expressed	IMGA|Medtr5g072620.1	Dihydroflavonol 4-reductase-like protein chr5 29922618-29926018 E EGN_Mt100125 20111014	GO:0009809|lignin biosynthetic process GO:0044237|cellular metabolic process GO:0046686|response to cadmium ion	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0016621|cinnamoyl-CoA reductase activity GO:0050662|coenzyme binding	GO:0005575|cellular_component
pt2_04985	C	C1A	Potri.002G004300	Potri.002G004300(CA)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_04986	A	A1S	Potri.002G004500	Potri.002G004500(AS)	POPTR_0002s00600	sp|Q9S9N9|CCR1_ARATH	Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1	AT2G33590.1	| Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr2:14224622-14226365 FORWARD LENGTH=321	LOC_Os06g41810.1	protein|reductase, putative, expressed	IMGA|Medtr5g072620.1	Dihydroflavonol 4-reductase-like protein chr5 29922618-29926018 E EGN_Mt100125 20111014	GO:0009809|lignin biosynthetic process GO:0044237|cellular metabolic process GO:0046686|response to cadmium ion	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0016621|cinnamoyl-CoA reductase activity GO:0050662|coenzyme binding	GO:0005575|cellular_component
pt2_04987	A	A1S	Potri.002G004600	Potri.002G004600(AS)	POPTR_0002s00610	sp|Q9I8B3|RB24B_XENLA	RNA-binding protein 24-B OS=Xenopus laevis GN=rbm24-b PE=2 SV=1	AT1G76460.1	| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr1:28686932-28688506 REVERSE LENGTH=285	LOC_Os02g48340.2	protein|RNA recognition motif containing protein, putative, expressed	IMGA|Medtr5g064120.1	RNA-binding protein chr5 25902597-25908008 F EGN_Mt100125 20111014	GO:0008150|biological_process GO:0048573|photoperiodism, flowering	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_04988	A	A1S	Potri.002G004800	Potri.002G004800(AS)	POPTR_0002s00620	sp|Q84JG2|SWI3B_ARATH	SWI/SNF complex subunit SWI3B OS=Arabidopsis thaliana GN=SWI3B PE=1 SV=1	AT2G33610.1	| Symbols: ATSWI3B, CHB2, SWI3B | switch subunit 3 | chr2:14229023-14231149 FORWARD LENGTH=469	LOC_Os02g10060.1	protein|SWIRM domain containing protein, expressed	IMGA|Medtr5g085170.1	SWI/SNF complex subunit SMARCC1 chr5 35741137-35742438 H EGN_Mt100125 20111014	GO:0006338|chromatin remodeling GO:0040029|regulation of gene expression, epigenetic GO:0048573|photoperiodism, flowering	GO:0003677|DNA binding GO:0005515|protein binding	GO:0005634|nucleus GO:0016514|SWI/SNF complex
pt2_04989	D	D1S	Potri.002G004900	Potri.002G004900(DS)	POPTR_0002s00630	sp|O64798|Y1747_ARATH	Inactive serine/threonine-protein kinase At1g67470 OS=Arabidopsis thaliana GN=At1g67470 PE=2 SV=1	AT3G57710.1	| Symbols: | Protein kinase superfamily protein | chr3:21386233-21387288 REVERSE LENGTH=351	LOC_Os04g51050.2	protein|OsWAK53b - OsWAK receptor-like protein kinase, expressed	IMGA|Medtr5g091950.1	BED finger-nbs resistance protein chr5 39093432-39086414 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus
pt2_04990	A	A2S	Potri.002G004900	Potri.002G004900(AS) Potri.002G003300(DS)	POPTR_0002s00640	sp|O64798|Y1747_ARATH	Inactive serine/threonine-protein kinase At1g67470 OS=Arabidopsis thaliana GN=At1g67470 PE=2 SV=1	AT3G57710.1	| Symbols: | Protein kinase superfamily protein | chr3:21386233-21387288 REVERSE LENGTH=351	LOC_Os04g51050.2	protein|OsWAK53b - OsWAK receptor-like protein kinase, expressed	IMGA|Medtr5g091950.1	BED finger-nbs resistance protein chr5 39093432-39086414 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus
pt2_04991	A	A2S	Potri.002G005000	Potri.002G005000(AS) Potri.005G256500(DS)	POPTR_0002s00650	sp|Q9S7C9|ESCA_ARATH	Putative DNA-binding protein ESCAROLA OS=Arabidopsis thaliana GN=ESC PE=2 SV=1	AT2G33620.4	| Symbols: | AT hook motif DNA-binding family protein | chr2:14234749-14236563 FORWARD LENGTH=351	LOC_Os08g40150.2	protein|AT hook motif domain containing protein, expressed	IMGA|Medtr5g010330.1	DNA-binding PD1-like protein chr5 2508875-2512497 E EGN_Mt100125 20111014	GO:0007389|pattern specification process GO:0048438|floral whorl development GO:0048439|flower morphogenesis	GO:0003677|DNA binding	GO:0005829|cytosol
pt2_04992	A	A1S	Potri.002G005100	Potri.002G005100(AS)	POPTR_0002s00660	sp|Q4R7R1|D42E1_MACFA	Short-chain dehydrogenase/reductase family 42E member 1 OS=Macaca fascicularis GN=SDR42E1 PE=2 SV=1	AT2G33630.1	| Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr2:14236951-14238734 REVERSE LENGTH=480	LOC_Os02g48460.1	protein|NAD dependent epimerase/dehydratase family protein, putative, expressed	NA	NA	GO:0006694|steroid biosynthetic process GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0003854|3-beta-hydroxy-delta5-steroid dehydrogenase activity GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	GO:0005783|endoplasmic reticulum
pt2_04993	B	B1S	Potri.002G005200	Potri.002G005200(BS)	POPTR_0002s00670	NA	NA	AT2G33630.1	| Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr2:14236951-14238734 REVERSE LENGTH=480	LOC_Os02g48460.1	protein|NAD dependent epimerase/dehydratase family protein, putative, expressed	NA	NA	GO:0006694|steroid biosynthetic process GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0003854|3-beta-hydroxy-delta5-steroid dehydrogenase activity GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	GO:0005783|endoplasmic reticulum
pt2_04994	A	A1S	Potri.002G005300	Potri.002G005300(AS)	POPTR_0002s00680	NA	NA	AT1G06330.1	| Symbols: | Heavy metal transport/detoxification superfamily protein | chr1:1931671-1932266 REVERSE LENGTH=159	LOC_Os08g40130.1	protein|heavy metal-associated domain containing protein, expressed	NA	NA	GO:0006825|copper ion transport GO:0030001|metal ion transport	GO:0005507|copper ion binding GO:0046872|metal ion binding	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_04995	A	A1S	Potri.002G005400	Potri.002G005400(AS)	POPTR_0002s00690	NA	NA	AT1G20870.1	| Symbols: | HSP20-like chaperones superfamily protein | chr1:7259287-7260775 REVERSE LENGTH=463	NA	NA	IMGA|Medtr1g082670.1	Heat shock protein-like protein chr1 21319213-21317430 H EGN_Mt100125 20111014	GO:0008150|biological_process GO:0009408|response to heat GO:0009644|response to high light intensity GO:0042542|response to hydrogen peroxide GO:0048451|petal formation GO:0048453|sepal formation	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus GO:0005737|cytoplasm
pt2_04996	A	A1S	Potri.002G005500	Potri.002G005500(AS)	POPTR_0002s00700	sp|Q9S735|PHT19_ARATH	Probable inorganic phosphate transporter 1-9 OS=Arabidopsis thaliana GN=PHT1-9 PE=2 SV=1	AT1G76430.1	| Symbols: PHT1;9 | phosphate transporter 1;9 | chr1:28679115-28681874 REVERSE LENGTH=532	LOC_Os06g21950.1	protein|inorganic phosphate transporter, putative, expressed	IMGA|Medtr1g043290.1	Inorganic phosphate transporter 1-1 chr1 12497182-12501214 E EGN_Mt100125 20111014	GO:0006817|phosphate ion transport	GO:0005351|sugar:hydrogen symporter activity GO:0015114|phosphate ion transmembrane transporter activity GO:0015144|carbohydrate transmembrane transporter activity GO:0015415|phosphate ion transmembrane-transporting ATPase activity	GO:0005886|plasma membrane GO:0009507|chloroplast GO:0016020|membrane
pt2_04997	A	A1S	Potri.002G005600	Potri.002G005600(AS)	POPTR_0002s00710	NA	NA	AT5G03780.1	| Symbols: TRFL10 | TRF-like 10 | chr5:999266-1000947 REVERSE LENGTH=420	LOC_Os11g06190.1	protein|expressed protein	NA	NA	GO:0006302|double-strand break repair GO:0009751|response to salicylic acid stimulus GO:0010332|response to gamma radiation	GO:0003677|DNA binding	NA
pt2_04998	A	A1S	Potri.002G005700	Potri.002G005700(AS)	POPTR_0002s00720	sp|Q9LM66|XCP2_ARATH	Xylem cysteine proteinase 2 OS=Arabidopsis thaliana GN=XCP2 PE=1 SV=2	AT1G20850.1	| Symbols: XCP2 | xylem cysteine peptidase 2 | chr1:7252208-7253537 FORWARD LENGTH=356	LOC_Os01g73980.1	protein|xylem cysteine proteinase 2 precursor, putative, expressed	IMGA|Medtr1g018840.2	Cysteine proteinase chr1 5706940-5702641 F EGN_Mt100125 20111014	GO:0006508|proteolysis GO:0010075|regulation of meristem growth GO:0010413|glucuronoxylan metabolic process GO:0010623|developmental programmed cell death GO:0045492|xylan biosynthetic process	GO:0008233|peptidase activity GO:0008234|cysteine-type peptidase activity	GO:0000325|plant-type vacuole GO:0005576|extracellular region GO:0005618|cell wall GO:0005634|nucleus GO:0009507|chloroplast
pt2_04999	A	A1S	Potri.002G005800	Potri.002G005800(AS)	POPTR_0002s00730	sp|Q9S851|NAC31_ARATH	Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana GN=NAC031 PE=1 SV=1	AT1G76420.1	| Symbols: CUC3, NAC368, ANAC031 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein | chr1:28672029-28673835 REVERSE LENGTH=334	LOC_Os08g40030.1	protein|CUP-SHAPED COTYLEDON3, putative, expressed	IMGA|contig_11212_1.1	NAC domain protein contig_11212 281-2118 H PREDN 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0007275|multicellular organismal development GO:0009855|determination of bilateral symmetry GO:0009965|leaf morphogenesis GO:0010014|meristem initiation GO:0010073|meristem maintenance GO:0010199|organ boundary specification between lateral organs and the meristem	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05000	A	A1S	Potri.002G006000	Potri.002G006000(AS)	POPTR_0002s00740	NA	NA	AT2G33690.1	| Symbols: | Late embryogenesis abundant protein, group 6 | chr2:14252199-14252414 FORWARD LENGTH=71	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_05001	A	A1S	Potri.002G006100	Potri.002G006100(AS)	POPTR_0002s00750	NA	NA	AT1G42550.1	| Symbols: PMI1 | plastid movement impaired1 | chr1:15977131-15979734 FORWARD LENGTH=843	LOC_Os09g38090.1	protein|expressed protein	NA	NA	GO:0006364|rRNA processing GO:0009902|chloroplast relocation GO:0010027|thylakoid membrane organization GO:0010207|photosystem II assembly GO:0034660|ncRNA metabolic process GO:0035304|regulation of protein dephosphorylation GO:0042793|transcription from plastid promoter GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003674|molecular_function	GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_05002	A	A1S	Potri.002G006200	Potri.002G006200(AS)	POPTR_0002s00760	sp|Q8LPQ8|MSSP2_ARATH	Monosaccharide-sensing protein 2 OS=Arabidopsis thaliana GN=MSSP2 PE=2 SV=2	AT4G35300.4	| Symbols: TMT2 | tonoplast monosaccharide transporter2 | chr4:16796432-16799071 REVERSE LENGTH=739	LOC_Os02g13560.4	protein|transporter family protein, putative, expressed	IMGA|Medtr5g024740.1	Monosaccharide-sensing protein chr5 9697538-9692309 E EGN_Mt100125 20111014	GO:0006810|transport GO:0055085|transmembrane transport	GO:0005215|transporter activity GO:0005337|nucleoside transmembrane transporter activity GO:0005351|sugar:hydrogen symporter activity GO:0015144|carbohydrate transmembrane transporter activity GO:0022857|transmembrane transporter activity GO:0022891|substrate-specific transmembrane transporter activity	GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0016020|membrane GO:0016021|integral to membrane
pt2_05003	A	A1S	Potri.002G006300	Potri.002G006300(AS)	POPTR_0002s00770	NA	NA	AT1G20830.1	| Symbols: MCD1 | multiple chloroplast division site 1 | chr1:7242933-7244736 FORWARD LENGTH=349	LOC_Os04g49540.1	protein|expressed protein	NA	NA	GO:0010020|chloroplast fission	GO:0003674|molecular_function	GO:0009706|chloroplast inner membrane GO:0009941|chloroplast envelope
pt2_05004	A	A1S	Potri.002G006400	Potri.002G006400(AS)	POPTR_0002s00780	sp|Q8LC69|ATL8_ARATH	RING-H2 finger protein ATL8 OS=Arabidopsis thaliana GN=ATL8 PE=2 SV=2	AT1G76410.1	| Symbols: ATL8 | RING/U-box superfamily protein | chr1:28668915-28669472 FORWARD LENGTH=185	LOC_Os02g58540.1	protein|RING-H2 finger protein, putative, expressed	IMGA|Medtr5g024730.1	Ring finger protein chr5 9683574-9684454 F EGN_Mt100125 20111014	GO:0009744|response to sucrose stimulus GO:0009750|response to fructose stimulus GO:0009855|determination of bilateral symmetry GO:0009944|polarity specification of adaxial/abaxial axis GO:0010014|meristem initiation GO:0010075|regulation of meristem growth	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_05005	C	C1S	Potri.002G006500	Potri.002G006500(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05006	A	A1S	Potri.002G006600	Potri.002G006600(AS)	POPTR_0002s00790	sp|Q9GMB0|RPN1_PIG	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Sus scrofa GN=RPN1 PE=1 SV=1	AT1G76400.1	| Symbols: | Ribophorin I | chr1:28658713-28661672 REVERSE LENGTH=614	LOC_Os05g23600.1	protein|dolichyl-diphosphooligosaccharide--protein glycosyltransferase 67 kDasubunit precursor, putative, expressed	NA	NA	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0006486|protein glycosylation GO:0006499|N-terminal protein myristoylation GO:0009086|methionine biosynthetic process GO:0030244|cellulose biosynthetic process	GO:0004576|oligosaccharyl transferase activity GO:0004579|dolichyl-diphosphooligosaccharide-protein glycotransferase activity	GO:0005783|endoplasmic reticulum GO:0009507|chloroplast GO:0016020|membrane GO:0016021|integral to membrane
pt2_05007	A	A1S	Potri.002G006700	Potri.002G006700(AS)	POPTR_0002s00800	sp|O22815|MLO5_ARATH	MLO-like protein 5 OS=Arabidopsis thaliana GN=MLO5 PE=2 SV=1	AT2G33670.1	| Symbols: MLO5, ATMLO5 | Seven transmembrane MLO family protein | chr2:14245138-14247879 FORWARD LENGTH=501	LOC_Os10g39520.1	protein|MLO domain containing protein, putative, expressed	IMGA|Medtr5g024700.1	Mlo family protein chr5 9668004-9673094 H EGN_Mt100125 20111014	GO:0006952|defense response GO:0008219|cell death GO:0009827|plant-type cell wall modification GO:0009860|pollen tube growth	GO:0005516|calmodulin binding	GO:0005886|plasma membrane GO:0016021|integral to membrane
pt2_05008	A	A1S	Potri.002G006800	Potri.002G006800(AS)	POPTR_0002s00810	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05009	A	A1S	Potri.002G006900	Potri.002G006900(AS)	POPTR_0002s00820	sp|Q6DR03|ZDHC3_ARATH	Probable S-acyltransferase At2g33640 OS=Arabidopsis thaliana GN=At2g33640 PE=2 SV=1	AT2G33640.1	| Symbols: | DHHC-type zinc finger family protein | chr2:14239500-14242240 FORWARD LENGTH=565	LOC_Os04g49560.1	protein|zinc finger family protein, putative, expressed	IMGA|Medtr5g042870.1	Palmitoyltransferase chr5 18425623-18419734 F EGN_Mt100125 20111014	GO:0009909|regulation of flower development GO:0016570|histone modification GO:0048449|floral organ formation	GO:0008270|zinc ion binding	NA
pt2_05010	A	A1S	Potri.002G007000	Potri.002G007000(AS)	POPTR_0002s00830	sp|O49873|MLOH1_HORVU	MLO protein homolog 1 OS=Hordeum vulgare GN=MLO-H1 PE=3 SV=1	AT2G39200.1	| Symbols: MLO12, ATMLO12 | Seven transmembrane MLO family protein | chr2:16356255-16359797 REVERSE LENGTH=576	LOC_Os03g03700.2	protein|MLO domain containing protein, putative, expressed	IMGA|Medtr5g024700.1	Mlo family protein chr5 9668004-9673094 H EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0002831|regulation of response to biotic stimulus GO:0006612|protein targeting to membrane GO:0006952|defense response GO:0008219|cell death GO:0009595|detection of biotic stimulus GO:0009617|response to bacterium GO:0009620|response to fungus GO:0009697|salicylic acid biosynthetic process GO:0009817|defense response to fungus, incompatible interaction GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0031348|negative regulation of defense response GO:0042742|defense response to bacterium GO:0043900|regulation of multi-organism process GO:0045087|innate immune response GO:0045088|regulation of innate immune response GO:0050832|defense response to fungus	GO:0005516|calmodulin binding	GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_05011	A	A2S	Potri.002G007100	Potri.002G007100(AS) Potri.005G254100(BS)	POPTR_0002s00840	sp|P12859|G3PB_PEA	Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Pisum sativum GN=GAPB PE=2 SV=2	AT1G42970.1	| Symbols: GAPB | glyceraldehyde-3-phosphate dehydrogenase B subunit | chr1:16127552-16129584 FORWARD LENGTH=447	LOC_Os03g03720.1	protein|glyceraldehyde-3-phosphate dehydrogenase, putative, expressed	NA	NA	GO:0006006|glucose metabolic process GO:0006096|glycolysis GO:0006098|pentose-phosphate shunt GO:0006364|rRNA processing GO:0006636|unsaturated fatty acid biosynthetic process GO:0009409|response to cold GO:0009416|response to light stimulus GO:0009637|response to blue light GO:0009644|response to high light intensity GO:0009657|plastid organization GO:0009744|response to sucrose stimulus GO:0009749|response to glucose stimulus GO:0009773|photosynthetic electron transport in photosystem I GO:0009902|chloroplast relocation GO:0010114|response to red light GO:0010155|regulation of proton transport GO:0010207|photosystem II assembly GO:0010218|response to far red light GO:0010304|PSII associated light-harvesting complex II catabolic process GO:0015994|chlorophyll metabolic process GO:0015995|chlorophyll biosynthetic process GO:0019216|regulation of lipid metabolic process GO:0019253|reductive pentose-phosphate cycle GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019344|cysteine biosynthetic process GO:0031408|oxylipin biosynthetic process GO:0042742|defense response to bacterium GO:0042744|hydrogen peroxide catabolic process GO:0046686|response to cadmium ion GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0004365|glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity GO:0016620|oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor GO:0047100|glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity GO:0050661|NADP binding GO:0051287|NAD binding	GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope GO:0010319|stromule GO:0016020|membrane GO:0048046|apoplast
pt2_05012	A	A1S	Potri.002G007200	Potri.002G007200(AS)	POPTR_0002s00850	sp|P32361|IRE1_YEAST	Serine/threonine-protein kinase/endoribonuclease IRE1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=IRE1 PE=1 SV=2	AT5G24360.3	| Symbols: IRE1-1 | inositol requiring 1-1 | chr5:8316718-8319827 FORWARD LENGTH=867	LOC_Os07g28820.1	protein|ribonuclease 2-5A family protein, expressed	IMGA|Medtr5g024510.1	Serine/threonine protein kinase/endoribonuclease IRE1 chr5 9604590-9598088 E EGN_Mt100125 20111014	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0006397|mRNA processing GO:0006468|protein phosphorylation GO:0010413|glucuronoxylan metabolic process GO:0030968|endoplasmic reticulum unfolded protein response GO:0045492|xylan biosynthetic process	GO:0004521|endoribonuclease activity GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0016891|endoribonuclease activity, producing 5'-phosphomonoesters	NA
pt2_05013	A	A1S	Potri.002G007300	Potri.002G007300(AS)	POPTR_0002s00860	sp|Q8VYE5|E1312_ARATH	Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV=1	AT4G29360.1	| Symbols: | O-Glycosyl hydrolases family 17 protein | chr4:14451562-14453687 REVERSE LENGTH=534	LOC_Os01g53750.1	protein|glucan endo-1,3-beta-glucosidase precursor, putative, expressed	IMGA|Medtr5g085580.1	"Glucan endo-1,3-beta-glucosidase" chr5 35975309-35973056 F EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0043169|cation binding	GO:0005576|extracellular region
pt2_05014	A	A1S	Potri.002G007400	Potri.002G007400(AS)	POPTR_0002s00870	sp|Q9C8E7|GLR33_ARATH	Glutamate receptor 3.3 OS=Arabidopsis thaliana GN=GLR3.3 PE=2 SV=1	AT1G42540.1	| Symbols: ATGLR3.3, GLR3.3 | glutamate receptor 3.3 | chr1:15973489-15976703 FORWARD LENGTH=933	LOC_Os02g02540.1	protein|glutamate receptor, putative, expressed	IMGA|Medtr5g024350.1	Glutamate receptor 3.6 chr5 9542660-9547378 E EGN_Mt100125 20111014	GO:0006810|transport GO:0006816|calcium ion transport GO:0006874|cellular calcium ion homeostasis GO:0007186|G-protein coupled receptor signaling pathway GO:0009416|response to light stimulus GO:0009630|gravitropism GO:0030003|cellular cation homeostasis GO:0071230|cellular response to amino acid stimulus	GO:0004965|G-protein coupled GABA receptor activity GO:0004970|ionotropic glutamate receptor activity GO:0005215|transporter activity GO:0005217|intracellular ligand-gated ion channel activity GO:0005234|extracellular-glutamate-gated ion channel activity GO:0005262|calcium channel activity GO:0008066|glutamate receptor activity	GO:0005576|extracellular region GO:0016020|membrane GO:0016021|integral to membrane
pt2_05015	A	A1S	Potri.002G007500	Potri.002G007500(AS)	POPTR_0002s00880	sp|P93006|P2C27_ARATH	Probable protein phosphatase 2C 27 OS=Arabidopsis thaliana GN=At2g33700 PE=2 SV=1	AT2G33700.1	| Symbols: | Protein phosphatase 2C family protein | chr2:14254200-14255784 FORWARD LENGTH=380	LOC_Os10g39540.1	protein|protein phosphatase 2C, putative, expressed	IMGA|Medtr5g024340.1	hypothetical protein chr5 9539462-9537501 H EGN_Mt100125 20111014	GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009651|response to salt stress GO:0009737|response to abscisic acid stimulus GO:0010200|response to chitin GO:0061416|regulation of transcription from RNA polymerase II promoter in response to salt stress	GO:0003824|catalytic activity GO:0004722|protein serine/threonine phosphatase activity	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_05016	A	A1S	Potri.002G007600	Potri.002G007600(AS)	POPTR_0002s00890	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process GO:0009627|systemic acquired resistance GO:0034976|response to endoplasmic reticulum stress	GO:0003674|molecular_function	NA
pt2_05017	A	A1S	Potri.002G007700	Potri.002G007700(AS)	POPTR_0002s00900	sp|Q9FII2|FK117_ARATH	F-box/kelch-repeat protein At5g42350 OS=Arabidopsis thaliana GN=At5g42350 PE=2 SV=1	AT5G42350.1	| Symbols: | Galactose oxidase/kelch repeat superfamily protein | chr5:16932106-16933797 FORWARD LENGTH=563	LOC_Os09g38300.1	protein|OsFBK20 - F-box domain and kelch repeat containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_05018	A	A1S	Potri.002G007800	Potri.002G007800(AS)	POPTR_0002s00910	sp|Q9SFX2|PUB43_ARATH	U-box domain-containing protein 43 OS=Arabidopsis thaliana GN=PUB43 PE=2 SV=1	AT1G76390.2	| Symbols: | ARM repeat superfamily protein | chr1:28655914-28658531 FORWARD LENGTH=811	LOC_Os12g17900.1	protein|armadillo/beta-catenin repeat family protein, putative, expressed	IMGA|contig_56658_1.1	U-box domain-containing protein contig_56658 130-4641 F PREDN 20111014	GO:0016567|protein ubiquitination	GO:0004842|ubiquitin-protein ligase activity	GO:0000151|ubiquitin ligase complex GO:0005737|cytoplasm GO:0005886|plasma membrane
pt2_05019	C	C1S	Potri.T103200	Potri.T103200(CS)	sp|Q8VZG8|Y4885_ARATH	Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=1 SV=3	AT4G08850.1	| Symbols: | Leucine-rich repeat receptor-like protein kinase family protein | chr4:5636693-5640496 REVERSE LENGTH=1045	LOC_Os01g33110.1	protein|receptor-like protein kinase 5 precursor, putative, expressed	IMGA|AC229724_1014.1	Receptor-like protein kinase AC229724.12 32051-35957 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006857|oligopeptide transport GO:0006995|cellular response to nitrogen starvation GO:0009627|systemic acquired resistance GO:0031347|regulation of defense response	GO:0004672|protein kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane
pt2_05020	G	G3	NA	NA	POPTR_0002s00930	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05021	C	C3S	Potri.002G008000	Potri.002G008000(CS) Potri.T102800(CS) Potri.002G008100(CS)	sp|Q8VZG8|Y4885_ARATH	Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=1 SV=3	AT4G08850.1	| Symbols: | Leucine-rich repeat receptor-like protein kinase family protein | chr4:5636693-5640496 REVERSE LENGTH=1045	LOC_Os01g33110.1	protein|receptor-like protein kinase 5 precursor, putative, expressed	IMGA|AC229724_1014.1	Receptor-like protein kinase AC229724.12 32051-35957 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006857|oligopeptide transport GO:0006995|cellular response to nitrogen starvation GO:0009627|systemic acquired resistance GO:0031347|regulation of defense response	GO:0004672|protein kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane
pt2_05022	A	A1S	Potri.002G008500	Potri.002G008500(AS)	POPTR_0002s00950	NA	NA	NA	NA	LOC_Os10g33060.1	protein|hcr2-5D, putative, expressed	IMGA|contig_11640_1.1	Receptor protein kinase contig_11640 1448-19 F PREDN 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	NA
pt2_05023	A	A2S	Potri.T102700	Potri.T102700(AS) Potri.002G008600(AS)	POPTR_0002s00960	NA	NA	AT1G20760.1	| Symbols: | Calcium-binding EF hand family protein | chr1:7209515-7214773 FORWARD LENGTH=1019	LOC_Os03g03830.1	protein|EF hand family protein, putative, expressed	IMGA|Medtr5g099170.1	Epidermal growth factor receptor substrate 15-like protein chr5 42431256-42442018 E EGN_Mt100125 20111014	GO:0051645|Golgi localization GO:0051646|mitochondrion localization GO:0060151|peroxisome localization	GO:0005509|calcium ion binding	GO:0005886|plasma membrane
pt2_05024	C	C1S	Potri.002G008700	Potri.002G008700(CS)	sp|Q3YK19|FANCJ_CHICK	Fanconi anemia group J protein homolog OS=Gallus gallus GN=BRIP1 PE=2 SV=1	AT1G20720.1	| Symbols: | RAD3-like DNA-binding helicase protein | chr1:7185658-7192794 REVERSE LENGTH=1175	LOC_Os09g37920.1	protein|helicase, putative, expressed	IMGA|contig_166862_1.1	Regulator of telomere elongation helicase 1 homolog contig_166862 370-11 H PREDN 20111014	GO:0006139|nucleobase-containing compound metabolic process GO:0006261|DNA-dependent DNA replication	GO:0003676|nucleic acid binding GO:0003677|DNA binding GO:0004003|ATP-dependent DNA helicase activity GO:0005524|ATP binding GO:0008026|ATP-dependent helicase activity GO:0016817|hydrolase activity, acting on acid anhydrides GO:0016818|hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	GO:0005634|nucleus GO:0005739|mitochondrion
pt2_05025	A	A3S	Potri.002G008800	Potri.002G008800(AS) Potri.002G008700(AA) Potri.005G252800(DS)	POPTR_0002s00980	sp|Q5QMM3|WOX8_ORYSJ	WUSCHEL-related homeobox 8 OS=Oryza sativa subsp. japonica GN=WOX8 PE=2 SV=1	AT4G35550.1	| Symbols: HB-4, WOX13, ATWOX13 | WUSCHEL related homeobox 13 | chr4:16875814-16877167 REVERSE LENGTH=268	LOC_Os01g60270.2	protein|homeobox domain containing protein, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0009691|cytokinin biosynthetic process GO:0010072|primary shoot apical meristem specification	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_05026	A	A1S	Potri.002G008900	Potri.002G008900(AS)	POPTR_0002s00990	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05027	A	A1S	Potri.002G009000	Potri.002G009000(AS)	POPTR_0002s01000	sp|P93047|HMGB3_ARATH	High mobility group B protein 3 OS=Arabidopsis thaliana GN=HMGB3 PE=1 SV=1	AT1G20696.2	| Symbols: HMGB3, NFD3, NFD03 | high mobility group B3 | chr1:7179825-7181193 FORWARD LENGTH=147	LOC_Os06g51220.4	protein|HMG1/2, putative, expressed	IMGA|Medtr5g024180.1	HMG1/2-like protein chr5 9437729-9438841 F EGN_Mt100125 20111014	GO:0006007|glucose catabolic process GO:0006096|glycolysis GO:0006333|chromatin assembly or disassembly GO:0006833|water transport GO:0006972|hyperosmotic response GO:0007030|Golgi organization GO:0009266|response to temperature stimulus GO:0009651|response to salt stress GO:0046686|response to cadmium ion	GO:0003677|DNA binding GO:0003682|chromatin binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0030527|structural constituent of chromatin	GO:0000785|chromatin GO:0005634|nucleus
pt2_05028	A	A1S	Potri.002G009000	Potri.002G009000(AS)	POPTR_0002s01000	sp|P93047|HMGB3_ARATH	High mobility group B protein 3 OS=Arabidopsis thaliana GN=HMGB3 PE=1 SV=1	AT1G20696.2	| Symbols: HMGB3, NFD3, NFD03 | high mobility group B3 | chr1:7179825-7181193 FORWARD LENGTH=147	LOC_Os06g51220.4	protein|HMG1/2, putative, expressed	IMGA|Medtr5g024180.1	HMG1/2-like protein chr5 9437729-9438841 F EGN_Mt100125 20111014	GO:0006007|glucose catabolic process GO:0006096|glycolysis GO:0006333|chromatin assembly or disassembly GO:0006833|water transport GO:0006972|hyperosmotic response GO:0007030|Golgi organization GO:0009266|response to temperature stimulus GO:0009651|response to salt stress GO:0046686|response to cadmium ion	GO:0003677|DNA binding GO:0003682|chromatin binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0030527|structural constituent of chromatin	GO:0000785|chromatin GO:0005634|nucleus
pt2_05029	A	A1S	Potri.002G009100	Potri.002G009100(AS)	POPTR_0002s01010	sp|Q9ULD4|BRPF3_HUMAN	Bromodomain and PHD finger-containing protein 3 OS=Homo sapiens GN=BRPF3 PE=1 SV=2	AT1G20670.1	| Symbols: | DNA-binding bromodomain-containing protein | chr1:7164537-7167933 REVERSE LENGTH=652	LOC_Os09g37760.1	protein|bromodomain domain containing protein, expressed	IMGA|Medtr5g093070.1	Bromodomain-containing protein chr5 39593358-39587047 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003677|DNA binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05030	G	G1	NA	NA	POPTR_0002s01020	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05031	A	A1S	Potri.002G009300	Potri.002G009300(AS)	POPTR_0002s01030	sp|Q9FE20|PBS1_ARATH	Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1	AT1G20650.1	| Symbols: | Protein kinase superfamily protein | chr1:7158422-7160022 REVERSE LENGTH=381	LOC_Os01g71000.1	protein|protein kinase APK1B, chloroplast precursor, putative, expressed	IMGA|Medtr5g092120.1	Serine/threonine protein kinase chr5 39187993-39185584 F EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0009740|gibberellic acid mediated signaling pathway GO:0010162|seed dormancy process	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005575|cellular_component GO:0005886|plasma membrane
pt2_05032	A	A1S	Potri.002G009400	Potri.002G009400(AS)	POPTR_0002s01040	sp|P46573|APK1B_ARATH	Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2	AT1G76360.1	| Symbols: | Protein kinase superfamily protein | chr1:28643242-28646483 REVERSE LENGTH=484	LOC_Os04g47620.1	protein|protein kinase APK1B, chloroplast precursor, putative, expressed	IMGA|Medtr5g023980.1	Serine/threonine protein kinase chr5 9330172-9322089 F EGN_Mt100125 20111014	GO:0002237|response to molecule of bacterial origin GO:0006468|protein phosphorylation GO:0006612|protein targeting to membrane GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010363|regulation of plant-type hypersensitive response	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0009507|chloroplast
pt2_05033	B	B6S	Potri.004G137300	Potri.004G137300(BS) Potri.006G151700(BS) Potri.012G071800(DS) Potri.001G196200(DS) Potri.011G118700(DS) Potri.018G052800(DS)	POPTR_0002s01045	NA	NA	AT5G33406.1	| Symbols: | hAT dimerisation domain-containing protein / transposase-related | chr5:12676126-12678403 REVERSE LENGTH=509	LOC_Os09g32380.1	protein|transposon protein, putative, unclassified, expressed	IMGA|Medtr5g012510.1	hypothetical protein chr5 3512350-3509693 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0046983|protein dimerization activity	NA
pt2_05034	A	A1S	Potri.002G009600	Potri.002G009600(AS)	POPTR_0002s01050	sp|P56941|NPC1_PIG	Niemann-Pick C1 protein OS=Sus scrofa GN=NPC1 PE=2 SV=1	AT4G38350.1	| Symbols: | Patched family protein | chr4:17958324-17966846 REVERSE LENGTH=1273	LOC_Os04g47590.1	protein|niemann-Pick C1 protein precursor, putative, expressed	IMGA|Medtr5g099070.1	Niemann-Pick C1 protein chr5 42398185-42377380 E EGN_Mt100125 20111014	NA	GO:0008158|hedgehog receptor activity	GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0009507|chloroplast GO:0016020|membrane GO:0016021|integral to membrane
pt2_05035	A	A1S	Potri.002G009600	Potri.002G009600(AS)	POPTR_0002s01050	sp|P56941|NPC1_PIG	Niemann-Pick C1 protein OS=Sus scrofa GN=NPC1 PE=2 SV=1	AT4G38350.1	| Symbols: | Patched family protein | chr4:17958324-17966846 REVERSE LENGTH=1273	LOC_Os04g47590.1	protein|niemann-Pick C1 protein precursor, putative, expressed	IMGA|Medtr5g099070.1	Niemann-Pick C1 protein chr5 42398185-42377380 E EGN_Mt100125 20111014	NA	GO:0008158|hedgehog receptor activity	GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0009507|chloroplast GO:0016020|membrane GO:0016021|integral to membrane
pt2_05036	A	A1S	Potri.002G009600	Potri.002G009600(AS)	POPTR_0002s01050	sp|P56941|NPC1_PIG	Niemann-Pick C1 protein OS=Sus scrofa GN=NPC1 PE=2 SV=1	AT4G38350.1	| Symbols: | Patched family protein | chr4:17958324-17966846 REVERSE LENGTH=1273	LOC_Os04g47590.1	protein|niemann-Pick C1 protein precursor, putative, expressed	IMGA|Medtr5g099070.1	Niemann-Pick C1 protein chr5 42398185-42377380 E EGN_Mt100125 20111014	NA	GO:0008158|hedgehog receptor activity	GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0009507|chloroplast GO:0016020|membrane GO:0016021|integral to membrane
pt2_05037	A	A1S	Potri.002G009600	Potri.002G009600(AS)	POPTR_0002s01050	sp|P56941|NPC1_PIG	Niemann-Pick C1 protein OS=Sus scrofa GN=NPC1 PE=2 SV=1	AT4G38350.1	| Symbols: | Patched family protein | chr4:17958324-17966846 REVERSE LENGTH=1273	LOC_Os04g47590.1	protein|niemann-Pick C1 protein precursor, putative, expressed	IMGA|Medtr5g099070.1	Niemann-Pick C1 protein chr5 42398185-42377380 E EGN_Mt100125 20111014	NA	GO:0008158|hedgehog receptor activity	GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0009507|chloroplast GO:0016020|membrane GO:0016021|integral to membrane
pt2_05038	A	A3S	Potri.002G009700	Potri.002G009700(AS) Potri.002G009600(AA) Potri.005G251700(DS)	POPTR_0002s01060	sp|Q9LE38|NLP4_ARATH	Protein NLP4 OS=Arabidopsis thaliana GN=NLP4 PE=2 SV=1	AT1G20640.2	| Symbols: | Plant regulator RWP-RK family protein | chr1:7155201-7157986 FORWARD LENGTH=844	LOC_Os03g03900.1	protein|NIN, putative, expressed	IMGA|Medtr5g099060.1	Nodule inception protein chr5 42369070-42372458 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009877|nodulation	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_05039	A	A2S	Potri.002G009800	Potri.002G009800(AS) Potri.005G251600(DS)	POPTR_0002s01080	sp|P17598|CATA1_GOSHI	Catalase isozyme 1 OS=Gossypium hirsutum GN=CAT1 PE=2 SV=2	AT4G35090.1	| Symbols: CAT2 | catalase 2 | chr4:16700937-16703215 REVERSE LENGTH=492	LOC_Os03g03910.1	protein|catalase domain containing protein, expressed	NA	NA	GO:0005982|starch metabolic process GO:0006979|response to oxidative stress GO:0006995|cellular response to nitrogen starvation GO:0008219|cell death GO:0009409|response to cold GO:0009416|response to light stimulus GO:0009648|photoperiodism GO:0009970|cellular response to sulfate starvation GO:0016036|cellular response to phosphate starvation GO:0042744|hydrogen peroxide catabolic process GO:0045454|cell redox homeostasis GO:0055114|oxidation-reduction process	GO:0004096|catalase activity GO:0005515|protein binding GO:0020037|heme binding GO:0050897|cobalt ion binding	GO:0005634|nucleus GO:0005739|mitochondrion GO:0005777|peroxisome GO:0009507|chloroplast GO:0010319|stromule GO:0022626|cytosolic ribosome
pt2_05040	A	A1S	Potri.002G009900	Potri.002G009900(AS)	POPTR_0002s01090	sp|Q681N2|PUB15_ARATH	U-box domain-containing protein 15 OS=Arabidopsis thaliana GN=PUB15 PE=2 SV=2	AT5G42340.1	| Symbols: PUB15 | Plant U-Box 15 | chr5:16928086-16930367 REVERSE LENGTH=660	LOC_Os08g37570.1	protein|spotted leaf 11, putative, expressed	IMGA|Medtr5g083030.1	U-box domain-containing protein chr5 34808238-34811295 E EGN_Mt100125 20111014	GO:0006944|cellular membrane fusion GO:0016567|protein ubiquitination GO:0048610|cellular process involved in reproduction GO:0048868|pollen tube development	GO:0004842|ubiquitin-protein ligase activity	GO:0000151|ubiquitin ligase complex GO:0005634|nucleus
pt2_05041	A	A1S	Potri.002G010000	Potri.002G010000(AS)	POPTR_0002s01100	sp|Q9SFW6|CCB24_ARATH	Cyclin-B2-4 OS=Arabidopsis thaliana GN=CYCB2-4 PE=2 SV=2	AT1G76310.1	| Symbols: CYCB2;4 | CYCLIN B2;4 | chr1:28628046-28630199 REVERSE LENGTH=431	LOC_Os06g51110.1	protein|cyclin, putative, expressed	IMGA|Medtr5g023790.1	G2/mitotic-specific cyclin-1 chr5 9215095-9211622 E EGN_Mt100125 20111014	GO:0000079|regulation of cyclin-dependent protein kinase activity GO:0006260|DNA replication GO:0006270|DNA replication initiation GO:0006275|regulation of DNA replication GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0006346|methylation-dependent chromatin silencing GO:0008283|cell proliferation GO:0010440|stomatal lineage progression GO:0016246|RNA interference GO:0031047|gene silencing by RNA GO:0031048|chromatin silencing by small RNA GO:0051567|histone H3-K9 methylation GO:0051726|regulation of cell cycle	GO:0005515|protein binding GO:0016538|cyclin-dependent protein kinase regulator activity GO:0019901|protein kinase binding	GO:0005634|nucleus
pt2_05042	A	A3S	Potri.002G010100	Potri.002G010100(AS) Potri.002G010200(AA) Potri.005G251300(DS)	POPTR_0002s01110	sp|Q8LEV3|Y2060_ARATH	BTB/POZ domain-containing protein At2g30600 OS=Arabidopsis thaliana GN=At2g30600/At2g30610 PE=2 SV=1	AT2G30600.4	| Symbols: | BTB/POZ domain-containing protein | chr2:13037410-13041475 FORWARD LENGTH=809	LOC_Os05g27880.2	protein|BBF1 - 2 Bric-a-Brac, Tramtrack, Broad Complex BTB domains with a F5/8 type C discoidin domain, expressed	IMGA|Medtr5g066730.1	Kelch-like protein chr5 27206706-27200029 F EGN_Mt100125 20111014	GO:0007155|cell adhesion GO:0009954|proximal/distal pattern formation GO:0010227|floral organ abscission GO:0048439|flower morphogenesis	NA	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_05043	A	A2S	Potri.002G010200	Potri.002G010200(AS) Potri.005G251100(BS)	POPTR_0002s01120	sp|P62323|SMD3_XENLA	Small nuclear ribonucleoprotein Sm D3 OS=Xenopus laevis GN=snrpd3 PE=2 SV=1	AT1G20580.1	| Symbols: | Small nuclear ribonucleoprotein family protein | chr1:7128979-7130371 FORWARD LENGTH=131	LOC_Os02g01250.1	protein|LSM domain containing protein, expressed	NA	NA	GO:0001510|RNA methylation	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005730|nucleolus GO:0005732|small nucleolar ribonucleoprotein complex GO:0005829|cytosol
pt2_05044	A	A1S	Potri.002G010300	Potri.002G010300(AS)	POPTR_0002s01130	sp|O60762|DPM1_HUMAN	Dolichol-phosphate mannosyltransferase OS=Homo sapiens GN=DPM1 PE=1 SV=1	AT1G20575.1	| Symbols: | Nucleotide-diphospho-sugar transferases superfamily protein | chr1:7126987-7128677 REVERSE LENGTH=246	LOC_Os03g60939.1	protein|dolichyl-phosphate beta-glycosyltransferase, putative, expressed	NA	NA	GO:0006486|protein glycosylation GO:0030244|cellulose biosynthetic process GO:0048193|Golgi vesicle transport	GO:0004582|dolichyl-phosphate beta-D-mannosyltransferase activity GO:0004686|elongation factor-2 kinase activity	GO:0005783|endoplasmic reticulum GO:0005886|plasma membrane GO:0033185|dolichol-phosphate-mannose synthase complex
pt2_05045	A	A2S	Potri.002G010400	Potri.002G010400(AS) Potri.005G250800(DS)	POPTR_0002s01140	NA	NA	AT5G42330.1	| Symbols: | unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr5:16926672-16927370 FORWARD LENGTH=205	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_05046	A	A1S	Potri.002G010500	Potri.002G010500(AS)	POPTR_0002s01150	sp|Q7XU38|C87A3_ORYSJ	Cytochrome P450 87A3 OS=Oryza sativa subsp. japonica GN=CYP87A3 PE=2 SV=3	AT1G12740.2	| Symbols: CYP87A2 | cytochrome P450, family 87, subfamily A, polypeptide 2 | chr1:4342462-4344569 FORWARD LENGTH=478	LOC_Os02g45280.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g010750.1	Cytochrome P450 chr5 2706043-2703036 E EGN_Mt100125 20111014	GO:0006826|iron ion transport GO:0010106|cellular response to iron ion starvation GO:0010167|response to nitrate GO:0015706|nitrate transport GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005739|mitochondrion
pt2_05047	A	A1S	Potri.002G010600	Potri.002G010600(AS)	POPTR_0002s01170	sp|F4HUK6|AAE1_ARATH	Probable acyl-activating enzyme 1, peroxisomal OS=Arabidopsis thaliana GN=AAE1 PE=2 SV=1	AT1G20560.1	| Symbols: AAE1 | acyl activating enzyme 1 | chr1:7119927-7121730 REVERSE LENGTH=556	LOC_Os03g04120.1	protein|AMP-binding enzyme, putative, expressed	IMGA|Medtr5g008800.1	2-succinylbenzoate-CoA ligase chr5 1693582-1690482 F EGN_Mt100125 20111014	GO:0008152|metabolic process GO:0015996|chlorophyll catabolic process	GO:0003824|catalytic activity GO:0016208|AMP binding	GO:0005739|mitochondrion GO:0005777|peroxisome
pt2_05048	C	C1S	Potri.002G010700	Potri.002G010700(CS)	sp|Q94FT4|SALAT_PAPSO	Salutaridinol 7-O-acetyltransferase OS=Papaver somniferum GN=SALAT PE=1 SV=1	AT3G26040.1	| Symbols: | HXXXD-type acyl-transferase family protein | chr3:9519741-9521069 FORWARD LENGTH=442	LOC_Os11g31090.1	protein|transferase family protein, putative, expressed	IMGA|Medtr5g084870.1	Vinorine synthase chr5 35616526-35615204 H EGN_Mt100125 20111014	NA	GO:0016740|transferase activity GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_05049	B	B2S	Potri.002G010800	Potri.002G010800(BS) Potri.002G010900(BA)	POPTR_0002s01190	NA	NA	AT5G42320.1	| Symbols: | Zn-dependent exopeptidases superfamily protein | chr5:16918651-16920845 REVERSE LENGTH=379	LOC_Os02g02710.1	protein|zinc carboxypeptidase family protein, putative, expressed	NA	NA	GO:0006508|proteolysis	GO:0004181|metallocarboxypeptidase activity GO:0008270|zinc ion binding	GO:0005576|extracellular region GO:0016020|membrane
pt2_05050	A	A1S	Potri.002G010900	Potri.002G010900(AS)	POPTR_0002s01200	sp|Q8L844|PP413_ARATH	Pentatricopeptide repeat-containing protein At5g42310, mitochondrial OS=Arabidopsis thaliana GN=At5g42310 PE=2 SV=1	AT5G42310.1	| Symbols: | Pentatricopeptide repeat (PPR-like) superfamily protein | chr5:16915860-16918238 FORWARD LENGTH=709	LOC_Os07g36390.1	protein|PPR repeat containing protein, expressed	IMGA|Medtr5g095130.1	Pentatricopeptide repeat-containing protein chr5 40539476-40536629 H EGN_Mt100125 20111014	NA	NA	GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_05051	G	G1	NA	NA	POPTR_0002s01210	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05052	A	A1S	Potri.002G011000	Potri.002G011000(AS)	POPTR_0002s01220	NA	NA	AT1G63610.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G14910.1); Has 537 Blast hits to 411 proteins in 100 species: Archae - 0; Bacteria - 231; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 212 (source: NCBI BLink). | chr1:23583675-23585599 REVERSE LENGTH=340	LOC_Os02g58650.1	protein|expressed protein	NA	NA	GO:0008150|biological_process GO:0010207|photosystem II assembly	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_05053	A	A1S	Potri.002G011100	Potri.002G011100(AS)	POPTR_0002s01230	sp|Q8W486|Y1491_ARATH	DUF246 domain-containing protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=1 SV=1	AT1G76270.1	| Symbols: | O-fucosyltransferase family protein | chr1:28613554-28616537 REVERSE LENGTH=572	LOC_Os04g47520.2	protein|growth regulator related protein, putative, expressed	IMGA|Medtr5g099010.1	Auxin-independent growth promoter chr5 42328255-42325012 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0016757|transferase activity, transferring glycosyl groups	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_05054	A	A2S	Potri.002G011200	Potri.002G011200(AS) Potri.005G249800(BS)	POPTR_0002s01250	sp|Q6NPN9|DWA2_ARATH	WD repeat-containing protein DWA2 OS=Arabidopsis thaliana GN=DWA2 PE=1 SV=1	AT1G20540.1	| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr1:7112652-7115191 FORWARD LENGTH=351	LOC_Os08g44010.4	protein|WD domain, G-beta repeat domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0000166|nucleotide binding	GO:0005634|nucleus GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_05055	A	A2S	Potri.002G011300	Potri.002G011300(AS) Potri.005G249700(DS)	POPTR_0002s01260	NA	NA	AT1G42430.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55760.3); Has 186 Blast hits to 143 proteins in 47 species: Archae - 0; Bacteria - 23; Metazoa - 14; Fungi - 6; Plants - 87; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). | chr1:15891512-15894322 FORWARD LENGTH=426	LOC_Os03g04100.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_05056	A	A2S	Potri.002G011400	Potri.002G011400(AS) Potri.005G249600(DS)	POPTR_0002s01270	NA	NA	AT1G76250.1	| Symbols: | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; Has 74 Blast hits to 74 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). | chr1:28606561-28608942 REVERSE LENGTH=434	LOC_Os02g02730.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	NA	GO:0005739|mitochondrion
pt2_05057	A	A1S	Potri.002G011500	Potri.002G011500(AS)	POPTR_0002s01280	NA	NA	AT3G51020.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66370.1); Has 19 Blast hits to 19 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:18949645-18950221 FORWARD LENGTH=133	NA	NA	NA	NA	NA	NA	GO:0005575|cellular_component
pt2_05058	A	A1S	Potri.002G011600	Potri.002G011600(AS)	POPTR_0002s01290	NA	NA	AT1G76240.1	| Symbols: | Arabidopsis protein of unknown function (DUF241) | chr1:28602949-28603875 REVERSE LENGTH=308	LOC_Os06g50980.1	protein|expressed protein	IMGA|Medtr5g023320.1	hypothetical protein chr5 9031545-9030694 H EGN_Mt100125 20111014	NA	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_05059	A	A1S	Potri.002G011700	Potri.002G011700(AS)	POPTR_0002s01300	NA	NA	AT4G35240.2	| Symbols: | Protein of unknown function (DUF630 and DUF632) | chr4:16761334-16764324 REVERSE LENGTH=865	LOC_Os09g37520.1	protein|DUF630/DUF632 domains containing protein, putative, expressed	IMGA|Medtr5g098980.1	BZIP transcription factor bZIP107 chr5 42306877-42302962 E EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation	NA	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_05060	A	A1S	Potri.002G011800	Potri.002G011800(AS)	POPTR_0002s01310	sp|Q944A7|Y4523_ARATH	Probable serine/threonine-protein kinase At4g35230 OS=Arabidopsis thaliana GN=At4g35230 PE=1 SV=1	AT4G35230.1	| Symbols: BSK1 | BR-signaling kinase 1 | chr4:16755325-16758041 REVERSE LENGTH=512	LOC_Os03g04050.1	protein|protein kinase family protein, putative, expressed	IMGA|Medtr5g098970.1	Receptor like protein kinase chr5 42299884-42292251 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006499|N-terminal protein myristoylation GO:0009737|response to abscisic acid stimulus GO:0009742|brassinosteroid mediated signaling pathway	GO:0004672|protein kinase activity GO:0005515|protein binding GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005773|vacuole GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane
pt2_05061	A	A1S	Potri.002G012000	Potri.002G012000(AS)	POPTR_0002s01320	sp|O82150|FTSH_TOBAC	ATP-dependent zinc metalloprotease FTSH, chloroplastic OS=Nicotiana tabacum GN=FTSH PE=2 SV=2	AT5G42270.1	| Symbols: VAR1, FTSH5 | FtsH extracellular protease family | chr5:16902659-16905102 FORWARD LENGTH=704	LOC_Os06g51029.1	protein|OsFtsH1 FtsH protease, homologue of AtFtsH1/5, expressed	IMGA|Medtr5g075340.1	Cell division protease ftsH-like protein chr5 31010140-31015963 H EGN_Mt100125 20111014	GO:0006098|pentose-phosphate shunt GO:0006508|proteolysis GO:0009773|photosynthetic electron transport in photosystem I GO:0010205|photoinhibition GO:0010206|photosystem II repair GO:0010304|PSII associated light-harvesting complex II catabolic process GO:0019761|glucosinolate biosynthetic process GO:0030163|protein catabolic process	GO:0000166|nucleotide binding GO:0004176|ATP-dependent peptidase activity GO:0004222|metalloendopeptidase activity GO:0005515|protein binding GO:0005524|ATP binding GO:0008237|metallopeptidase activity GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009579|thylakoid GO:0009941|chloroplast envelope GO:0016020|membrane GO:0031977|thylakoid lumen
pt2_05062	B	B1S	Potri.002G012100	Potri.002G012100(BS)	POPTR_0002s01330	NA	NA	AT2G17080.1	| Symbols: | Arabidopsis protein of unknown function (DUF241) | chr2:7433326-7434117 REVERSE LENGTH=263	LOC_Os11g06110.1	protein|carrier, putative, expressed	IMGA|Medtr5g023340.1	hypothetical protein chr5 9036074-9035214 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_05063	A	A1S	Potri.002G012200	Potri.002G012200(AS)	POPTR_0002s01340	NA	NA	AT2G17080.1	| Symbols: | Arabidopsis protein of unknown function (DUF241) | chr2:7433326-7434117 REVERSE LENGTH=263	LOC_Os08g43980.1	protein|carrier, putative, expressed	IMGA|Medtr5g023550.1	hypothetical protein chr5 9099154-9100050 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_05064	A	A1S	Potri.002G012300	Potri.002G012300(AS)	POPTR_0002s01350	sp|A8MQA2|NLTPD_ARATH	Non-specific lipid-transfer protein 13 OS=Arabidopsis thaliana GN=LTP13 PE=2 SV=1	AT5G44265.1	| Symbols: | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr5:17832779-17833316 REVERSE LENGTH=126	NA	NA	NA	NA	GO:0006869|lipid transport	NA	NA
pt2_05065	A	A4S	Potri.T179200	Potri.T179200(AS) Potri.002G012400(AS) Potri.T179300(DS) Potri.002G012200(DS)	POPTR_0002s01360	NA	NA	AT2G17080.1	| Symbols: | Arabidopsis protein of unknown function (DUF241) | chr2:7433326-7434117 REVERSE LENGTH=263	LOC_Os08g43960.1	protein|carrier, putative, expressed	IMGA|Medtr5g023340.1	hypothetical protein chr5 9036074-9035214 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_05066	G	G1	NA	NA	POPTR_0002s01370	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05067	A	A2S	Potri.002G012400	Potri.002G012400(AS) Potri.T179300(AS)	POPTR_0002s01380	NA	NA	AT2G17080.1	| Symbols: | Arabidopsis protein of unknown function (DUF241) | chr2:7433326-7434117 REVERSE LENGTH=263	LOC_Os08g43970.1	protein|carrier, putative, expressed	IMGA|Medtr5g023550.1	hypothetical protein chr5 9099154-9100050 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_05068	A	A1S	Potri.002G012500	Potri.002G012500(AS)	POPTR_0002s01390	sp|Q8LBB7|LOG5_ARATH	Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5 OS=Arabidopsis thaliana GN=LOG5 PE=1 SV=1	AT4G35190.1	| Symbols: | Putative lysine decarboxylase family protein | chr4:16746724-16748090 FORWARD LENGTH=228	LOC_Os10g33900.1	protein|possible lysine decarboxylase domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005829|cytosol
pt2_05069	B	B1S	Potri.002G012600	Potri.002G012600(BS)	POPTR_0002s01400	NA	NA	AT1G76210.1	| Symbols: | Arabidopsis protein of unknown function (DUF241) | chr1:28595202-28595882 REVERSE LENGTH=226	NA	NA	IMGA|Medtr5g023390.1	hypothetical protein chr5 9048514-9047654 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_05070	A	A1S	Potri.002G012700	Potri.002G012700(AS)	POPTR_0002s01410	sp|Q8LDK3|NDUB2_ARATH	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 OS=Arabidopsis thaliana GN=At1g76200 PE=3 SV=1	AT1G76200.1	| Symbols: | unknown protein; Has 96 Blast hits to 96 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 47; Plants - 38; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). | chr1:28593351-28593980 FORWARD LENGTH=69	LOC_Os05g03150.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005747|mitochondrial respiratory chain complex I
pt2_05071	A	A1S	Potri.002G012800	Potri.002G012800(AS)	POPTR_0002s01420	sp|Q84P21|4CLL5_ARATH	4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana GN=4CLL5 PE=1 SV=2	AT1G20510.1	| Symbols: OPCL1 | OPC-8:0 CoA ligase1 | chr1:7103645-7105856 REVERSE LENGTH=546	LOC_Os03g04000.1	protein|AMP-binding domain containing protein, expressed	IMGA|Medtr5g027480.1	4-coumarate-CoA ligase chr5 11195434-11192919 H EGN_Mt100125 20111014	GO:0008152|metabolic process GO:0009611|response to wounding GO:0009620|response to fungus GO:0009695|jasmonic acid biosynthetic process GO:0009698|phenylpropanoid metabolic process GO:0009753|response to jasmonic acid stimulus GO:0010200|response to chitin	GO:0003824|catalytic activity GO:0016207|4-coumarate-CoA ligase activity	GO:0005777|peroxisome GO:0009507|chloroplast
pt2_05072	A	A1S	Potri.002G012900	Potri.002G012900(AS)	POPTR_0002s01430	sp|Q9SX98|LHTL8_ARATH	Lysine histidine transporter-like 8 OS=Arabidopsis thaliana GN=AATL1 PE=1 SV=1	AT1G47670.1	| Symbols: | Transmembrane amino acid transporter family protein | chr1:17536834-17539486 REVERSE LENGTH=519	LOC_Os04g47420.1	protein|transmembrane amino acid transporter protein, putative, expressed	IMGA|Medtr5g023260.1	Lysine histidine transporter-like protein chr5 9001185-8997515 E EGN_Mt100125 20111014	GO:0006865|amino acid transport GO:0010075|regulation of meristem growth	GO:0015171|amino acid transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_05073	A	A1S	Potri.002G013000	Potri.002G013000(AS)	POPTR_0002s01440	NA	NA	AT1G20460.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76185.1); Has 37 Blast hits to 37 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:7091505-7092993 FORWARD LENGTH=106	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_05074	A	A1S	Potri.002G013100	Potri.002G013100(AS)	POPTR_0002s01450	sp|Q8VXV7|LDL1_ARATH	Lysine-specific histone demethylase 1 homolog 1 OS=Arabidopsis thaliana GN=LDL1 PE=1 SV=1	AT1G62830.1	| Symbols: LDL1, SWP1, ATSWP1, ATLSD1, LSD1 | LSD1-like 1 | chr1:23264638-23267172 REVERSE LENGTH=844	LOC_Os02g51880.1	protein|amine oxidase, putative, expressed	IMGA|Medtr1g023510.1	Lysine-specific histone demethylase-like protein chr1 7288358-7279269 H EGN_Mt100125 20111014	GO:0016575|histone deacetylation GO:0048364|root development GO:0051568|histone H3-K4 methylation GO:0055114|oxidation-reduction process	GO:0008131|primary amine oxidase activity GO:0016491|oxidoreductase activity	GO:0005634|nucleus
pt2_05075	A	A1S	Potri.002G013200	Potri.002G013200(AS)	POPTR_0002s01460	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006950|response to stress GO:0009269|response to desiccation GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009415|response to water stimulus GO:0009631|cold acclimation GO:0009651|response to salt stress GO:0009737|response to abscisic acid stimulus GO:0010029|regulation of seed germination	GO:0003779|actin binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol GO:0009506|plasmodesma GO:0015629|actin cytoskeleton GO:0016020|membrane
pt2_05076	A	A1S	Potri.002G013300	Potri.002G013300(AS)	POPTR_0002s01470	sp|Q304B9|NCASE_ARATH	Neutral ceramidase OS=Arabidopsis thaliana GN=At2g38010 PE=2 SV=1	AT2G38010.1	| Symbols: | Neutral/alkaline non-lysosomal ceramidase | chr2:15906862-15909867 FORWARD LENGTH=757	LOC_Os01g43520.2	protein|neutral ceramidase precursor, putative, expressed	IMGA|Medtr5g096890.1	Neutral ceramidase chr5 41358661-41365273 E EGN_Mt100125 20111014	NA	GO:0017040|ceramidase activity	GO:0005576|extracellular region GO:0009506|plasmodesma
pt2_05077	A	A1S	Potri.002G013400	Potri.002G013400(AS)	POPTR_0002s01480	sp|Q9FH04|ADHL7_ARATH	Alcohol dehydrogenase-like 7 OS=Arabidopsis thaliana GN=At5g42250 PE=2 SV=1	AT5G42250.1	| Symbols: | Zinc-binding alcohol dehydrogenase family protein | chr5:16894087-16897450 FORWARD LENGTH=390	LOC_Os07g42924.1	protein|dehydrogenase, putative, expressed	IMGA|Medtr5g087710.1	Alcohol dehydrogenase-like protein chr5 37019082-37015790 E EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0008270|zinc ion binding GO:0016491|oxidoreductase activity	GO:0005737|cytoplasm
pt2_05078	A	A1S	Potri.002G013400	Potri.002G013400(AS)	POPTR_0002s01480	sp|Q9FH04|ADHL7_ARATH	Alcohol dehydrogenase-like 7 OS=Arabidopsis thaliana GN=At5g42250 PE=2 SV=1	AT5G42250.1	| Symbols: | Zinc-binding alcohol dehydrogenase family protein | chr5:16894087-16897450 FORWARD LENGTH=390	LOC_Os07g42924.1	protein|dehydrogenase, putative, expressed	IMGA|Medtr5g087710.1	Alcohol dehydrogenase-like protein chr5 37019082-37015790 E EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0008270|zinc ion binding GO:0016491|oxidoreductase activity	GO:0005737|cytoplasm
pt2_05079	A	A1S	Potri.002G013400	Potri.002G013400(AS)	POPTR_0002s01480	sp|Q9FH04|ADHL7_ARATH	Alcohol dehydrogenase-like 7 OS=Arabidopsis thaliana GN=At5g42250 PE=2 SV=1	AT5G42250.1	| Symbols: | Zinc-binding alcohol dehydrogenase family protein | chr5:16894087-16897450 FORWARD LENGTH=390	LOC_Os07g42924.1	protein|dehydrogenase, putative, expressed	IMGA|Medtr5g087710.1	Alcohol dehydrogenase-like protein chr5 37019082-37015790 E EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0008270|zinc ion binding GO:0016491|oxidoreductase activity	GO:0005737|cytoplasm
pt2_05080	A	A1S	Potri.002G013500	Potri.002G013500(AS)	POPTR_0002s01490	sp|A7X5R6|BAG6_ORNAN	Large proline-rich protein BAG6 OS=Ornithorhynchus anatinus GN=BAG6 PE=3 SV=1	AT5G42220.1	| Symbols: | Ubiquitin-like superfamily protein | chr5:16872962-16877455 FORWARD LENGTH=879	LOC_Os08g19830.3	protein|ubiquitin family protein, putative, expressed	NA	NA	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0009630|gravitropism GO:0048573|photoperiodism, flowering	NA	GO:0005634|nucleus GO:0005829|cytosol
pt2_05081	A	A1S	Potri.002G013600	Potri.002G013600(AS)	POPTR_0002s01500	NA	NA	AT1G20430.1	| Symbols: | unknown protein; Has 29 Blast hits to 29 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:7083471-7083821 REVERSE LENGTH=116	LOC_Os06g11060.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_05082	A	A1S	Potri.002G013700	Potri.002G013700(AS)	POPTR_0002s01510	sp|Q00624|ASOL_BRANA	L-ascorbate oxidase homolog OS=Brassica napus GN=Bp10 PE=2 SV=1	AT1G76160.1	| Symbols: sks5 | SKU5 similar 5 | chr1:28578211-28581020 REVERSE LENGTH=541	LOC_Os07g32660.1	protein|monocopper oxidase, putative, expressed	IMGA|Medtr5g018270.1	L-ascorbate oxidase-like protein chr5 6538701-6543083 F EGN_Mt100125 20111014	GO:0016126|sterol biosynthetic process GO:0052541|plant-type cell wall cellulose metabolic process GO:0052546|cell wall pectin metabolic process GO:0055114|oxidation-reduction process	GO:0005507|copper ion binding GO:0016491|oxidoreductase activity	GO:0005576|extracellular region GO:0005618|cell wall GO:0009505|plant-type cell wall GO:0009506|plasmodesma GO:0048046|apoplast
pt2_05083	A	A1S	Potri.002G013800	Potri.002G013800(AS)	POPTR_0002s01520	sp|Q8VYI3|ECH2_ARATH	Enoyl-CoA hydratase 2, peroxisomal OS=Arabidopsis thaliana GN=ECH2 PE=1 SV=1	AT1G76150.1	| Symbols: ECH2, ATECH2 | enoyl-CoA hydratase 2 | chr1:28575236-28577637 REVERSE LENGTH=309	LOC_Os09g37280.1	protein|peroxisomal multifunctional enzyme type 2, putative, expressed	NA	NA	GO:0006635|fatty acid beta-oxidation GO:0007031|peroxisome organization GO:0008152|metabolic process GO:0009407|toxin catabolic process GO:0010260|organ senescence GO:0033542|fatty acid beta-oxidation, unsaturated, even number GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	GO:0016491|oxidoreductase activity GO:0080023|3R-hydroxyacyl-CoA dehydratase activity	GO:0005777|peroxisome
pt2_05084	A	A1S	Potri.002G013900	Potri.002G013900(AS)	POPTR_0002s01530	sp|P48147|PPCE_HUMAN	Prolyl endopeptidase OS=Homo sapiens GN=PREP PE=1 SV=2	AT1G76140.1	| Symbols: | Prolyl oligopeptidase family protein | chr1:28571187-28574852 FORWARD LENGTH=795	LOC_Os01g01830.1	protein|OsPOP1 - Putative Prolyl Oligopeptidase homologue, expressed	IMGA|contig_114076_1.1	Prolyl endopeptidase contig_114076 542-4304 E PREDN 20111014	GO:0006508|proteolysis GO:0030244|cellulose biosynthetic process GO:0048193|Golgi vesicle transport	GO:0004252|serine-type endopeptidase activity GO:0008236|serine-type peptidase activity GO:0070008|serine-type exopeptidase activity	GO:0009507|chloroplast
pt2_05085	A	A1S	Potri.002G014000	Potri.002G014000(AS)	POPTR_0002s01540	sp|P48147|PPCE_HUMAN	Prolyl endopeptidase OS=Homo sapiens GN=PREP PE=1 SV=2	AT1G76140.1	| Symbols: | Prolyl oligopeptidase family protein | chr1:28571187-28574852 FORWARD LENGTH=795	LOC_Os01g01830.1	protein|OsPOP1 - Putative Prolyl Oligopeptidase homologue, expressed	IMGA|contig_114076_1.1	Prolyl endopeptidase contig_114076 542-4304 E PREDN 20111014	GO:0006508|proteolysis GO:0030244|cellulose biosynthetic process GO:0048193|Golgi vesicle transport	GO:0004252|serine-type endopeptidase activity GO:0008236|serine-type peptidase activity GO:0070008|serine-type exopeptidase activity	GO:0009507|chloroplast
pt2_05086	A	A1S	Potri.002G014100	Potri.002G014100(AS)	POPTR_0002s01550	sp|Q93ZY2|ROGF1_ARATH	Rop guanine nucleotide exchange factor 1 OS=Arabidopsis thaliana GN=ROPGEF1 PE=1 SV=2	AT4G38430.1	| Symbols: ATROPGEF1, ROPGEF1 | rho guanyl-nucleotide exchange factor 1 | chr4:17986643-17988659 FORWARD LENGTH=548	LOC_Os09g37270.1	protein|ATROPGEF7/ROPGEF7, putative, expressed	IMGA|Medtr5g081410.1	Rop guanine nucleotide exchange factor chr5 33853946-33849635 E EGN_Mt100125 20111014	GO:0000271|polysaccharide biosynthetic process GO:0007389|pattern specification process GO:0008361|regulation of cell size GO:0009825|multidimensional cell growth GO:0009860|pollen tube growth GO:0009926|auxin polar transport GO:0009932|cell tip growth GO:0010015|root morphogenesis GO:0010075|regulation of meristem growth GO:0010817|regulation of hormone levels GO:0040007|growth GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0048767|root hair elongation GO:0071555|cell wall organization	GO:0005089|Rho guanyl-nucleotide exchange factor activity	GO:0005634|nucleus GO:0016324|apical plasma membrane
pt2_05087	A	A1S	Potri.002G014200	Potri.002G014200(AS)	POPTR_0002s01560	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05088	A	A1S	Potri.002G014300	Potri.002G014300(AS)	POPTR_0002s01570	sp|P17859|AMYA_VIGMU	Alpha-amylase OS=Vigna mungo GN=AMY1.1 PE=2 SV=1	AT1G76130.1	| Symbols: ATAMY2, AMY2 | alpha-amylase-like 2 | chr1:28561647-28563914 FORWARD LENGTH=413	LOC_Os04g33040.1	protein|alpha-amylase precursor, putative, expressed	IMGA|Medtr1g019440.2	Alpha-amylase chr1 6026886-6029202 F EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0005980|glycogen catabolic process	GO:0003824|catalytic activity GO:0004556|alpha-amylase activity GO:0005509|calcium ion binding GO:0043169|cation binding	GO:0005576|extracellular region
pt2_05089	B	B1S	Potri.002G014400	Potri.002G014400(BS)	POPTR_0002s01580	sp|Q6CC39|PUS1_YARLI	tRNA pseudouridine synthase 1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=PUS1 PE=3 SV=1	AT1G20370.1	| Symbols: | Pseudouridine synthase family protein | chr1:7051846-7053588 REVERSE LENGTH=549	LOC_Os02g44810.1	protein|tRNA pseudouridine synthase family protein, putative, expressed	NA	NA	GO:0001522|pseudouridine synthesis GO:0006333|chromatin assembly or disassembly GO:0009451|RNA modification	GO:0003723|RNA binding GO:0009982|pseudouridine synthase activity	GO:0005634|nucleus GO:0005829|cytosol
pt2_05090	A	A1S	Potri.002G014500	Potri.002G014500(AS)	POPTR_0002s01590	sp|Q3EBZ2|SKI23_ARATH	F-box protein SKIP23 OS=Arabidopsis thaliana GN=SKIP23 PE=1 SV=1	AT2G17030.1	| Symbols: | F-box family protein with a domain of unknown function (DUF295) | chr2:7399108-7400650 FORWARD LENGTH=407	LOC_Os04g08510.1	protein|OsFBX117 - F-box domain containing protein, expressed	IMGA|Medtr1g091800.1	F-box protein chr1 25506849-25509381 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05091	A	A1S	Potri.002G014600	Potri.002G014600(AS)	POPTR_0002s01600	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05092	A	A1S	Potri.002G014700	Potri.002G014700(AS)	POPTR_0002s01610	sp|Q7JUR6|GDAP2_DROME	Protein GDAP2 homolog OS=Drosophila melanogaster GN=CG18812 PE=2 SV=1	AT4G35750.1	| Symbols: | SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein | chr4:16940865-16941674 REVERSE LENGTH=202	LOC_Os04g47330.1	protein|rho-GTPase-activating protein-related, putative, expressed	IMGA|Medtr5g023210.1	Ganglioside-induced differentiation-associated protein chr5 8965545-8966544 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_05093	A	A1S	Potri.002G014800	Potri.002G014800(AS)	POPTR_0002s01620	sp|Q9FND6|PP411_ARATH	Pentatricopeptide repeat-containing protein At5g40410, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H15 PE=2 SV=1	AT5G40410.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:16171385-16173211 FORWARD LENGTH=608	LOC_Os07g39910.1	protein|pentatricopeptide repeat domain containing protein, putative, expressed	IMGA|Medtr5g008600.1	Pentatricopeptide repeat-containing protein chr5 1604164-1608184 H EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005739|mitochondrion
pt2_05094	A	A1S	Potri.002G014900	Potri.002G014900(AS)	POPTR_0002s01630	sp|Q38853|STR15_ARATH	Rhodanese-like domain-containing protein 15, chloroplastic OS=Arabidopsis thaliana GN=STR15 PE=2 SV=1	AT4G35770.1	| Symbols: SEN1, ATSEN1, DIN1 | Rhodanese/Cell cycle control phosphatase superfamily protein | chr4:16945073-16945983 FORWARD LENGTH=182	LOC_Os06g50930.2	protein|rhodanese-like domain containing protein, putative, expressed	IMGA|Medtr5g023170.1	Senescence-associated protein DIN1 chr5 8957881-8956426 F EGN_Mt100125 20111014	GO:0006979|response to oxidative stress GO:0007568|aging GO:0009416|response to light stimulus GO:0009611|response to wounding GO:0009744|response to sucrose stimulus GO:0009750|response to fructose stimulus GO:0009753|response to jasmonic acid stimulus	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_05095	A	A1S	Potri.002G015000	Potri.002G015000(AS)	POPTR_0002s01640	NA	NA	AT3G07860.1	| Symbols: | Ubiquitin-like superfamily protein | chr3:2507895-2508656 FORWARD LENGTH=165	LOC_Os04g56770.1	protein|expressed protein	NA	NA	GO:0006626|protein targeting to mitochondrion	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_05096	A	A1S	Potri.002G015100	Potri.002G015100(AS)	POPTR_0002s01650	sp|Q96324|GSTFB_ARATH	Glutathione S-transferase F11 OS=Arabidopsis thaliana GN=GSTF11 PE=2 SV=1	AT3G03190.1	| Symbols: ATGSTF11, ATGSTF6, GSTF11 | glutathione S-transferase F11 | chr3:735071-735877 FORWARD LENGTH=214	LOC_Os03g04260.1	protein|glutathione S-transferase, putative, expressed	IMGA|Medtr1g026140.1	Glutathione S-transferase chr1 8532077-8531225 F EGN_Mt100125 20111014	GO:0006098|pentose-phosphate shunt GO:0006979|response to oxidative stress GO:0009407|toxin catabolic process GO:0019252|starch biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019760|glucosinolate metabolic process GO:0019761|glucosinolate biosynthetic process	GO:0004364|glutathione transferase activity	GO:0005737|cytoplasm
pt2_05097	A	A1S	Potri.002G015200	Potri.002G015200(AS)	POPTR_0002s01660	sp|Q96324|GSTFB_ARATH	Glutathione S-transferase F11 OS=Arabidopsis thaliana GN=GSTF11 PE=2 SV=1	AT3G03190.1	| Symbols: ATGSTF11, ATGSTF6, GSTF11 | glutathione S-transferase F11 | chr3:735071-735877 FORWARD LENGTH=214	LOC_Os03g04260.1	protein|glutathione S-transferase, putative, expressed	IMGA|Medtr1g026140.1	Glutathione S-transferase chr1 8532077-8531225 F EGN_Mt100125 20111014	GO:0006098|pentose-phosphate shunt GO:0006979|response to oxidative stress GO:0009407|toxin catabolic process GO:0019252|starch biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019760|glucosinolate metabolic process GO:0019761|glucosinolate biosynthetic process	GO:0004364|glutathione transferase activity	GO:0005737|cytoplasm
pt2_05098	G	G1	NA	NA	POPTR_0002s01670	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05099	A	A1S	Potri.002G015400	Potri.002G015400(AS)	POPTR_0002s01680	sp|Q2MHE4|HT1_ARATH	Serine/threonine-protein kinase HT1 OS=Arabidopsis thaliana GN=HT1 PE=1 SV=1	AT4G38470.1	| Symbols: | ACT-like protein tyrosine kinase family protein | chr4:17999432-18003551 FORWARD LENGTH=575	LOC_Os09g37230.1	protein|protein kinase family protein, putative, expressed	IMGA|Medtr5g023150.1	Dual specificity protein kinase pyk2 chr5 8944735-8953212 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0007015|actin filament organization GO:0008152|metabolic process GO:0009658|chloroplast organization	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004712|protein serine/threonine/tyrosine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016597|amino acid binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005829|cytosol GO:0005886|plasma membrane
pt2_05100	A	A1S	Potri.002G015500	Potri.002G015500(AS)	POPTR_0002s01690	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05101	C	C1S	Potri.002G015600	Potri.002G015600(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05102	A	A1S	Potri.002G015700	Potri.002G015700(AS)	POPTR_0002s01710	NA	NA	NA	NA	LOC_Os04g49360.1	protein|OsFBX149 - F-box domain containing protein, expressed	IMGA|Medtr5g038230.1	hypothetical protein chr5 16297353-16298490 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05103	A	A1S	Potri.002G015800	Potri.002G015800(AS)	POPTR_0002s01720	sp|P50134|DCOR_DATST	Ornithine decarboxylase OS=Datura stramonium PE=2 SV=1	NA	NA	LOC_Os09g37120.1	protein|pyridoxal-dependent decarboxylase protein, putative, expressed	NA	NA	GO:0009089|lysine biosynthetic process via diaminopimelate	GO:0003824|catalytic activity GO:0008836|diaminopimelate decarboxylase activity	GO:0005829|cytosol GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_05104	A	A1S	Potri.002G015900	Potri.002G015900(AS)	POPTR_0002s01730	NA	NA	AT5G27280.1	| Symbols: | Zim17-type zinc finger protein | chr5:9617548-9618369 FORWARD LENGTH=212	LOC_Os06g50870.1	protein|DNL zinc finger domain containing protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function GO:0008270|zinc ion binding	GO:0009507|chloroplast
pt2_05105	A	A2S	Potri.002G015900	Potri.002G015900(AS) Potri.005G246200(DS)	POPTR_0002s01730	NA	NA	AT5G27280.1	| Symbols: | Zim17-type zinc finger protein | chr5:9617548-9618369 FORWARD LENGTH=212	LOC_Os06g50870.1	protein|DNL zinc finger domain containing protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function GO:0008270|zinc ion binding	GO:0009507|chloroplast
pt2_05106	A	A2S	Potri.002G016000	Potri.002G016000(AS) Potri.005G246100(DS)	POPTR_0002s01740	sp|P11970|PLAS2_POPNI	Plastocyanin B, chloroplastic OS=Populus nigra GN=PETE PE=1 SV=2	AT1G20340.1	| Symbols: DRT112, PETE2 | Cupredoxin superfamily protein | chr1:7042770-7043273 REVERSE LENGTH=167	LOC_Os06g01210.1	protein|plastocyanin, chloroplast precursor, putative, expressed	NA	NA	GO:0009773|photosynthetic electron transport in photosystem I GO:0019344|cysteine biosynthetic process GO:0019684|photosynthesis, light reaction GO:0030003|cellular cation homeostasis GO:0035304|regulation of protein dephosphorylation GO:0070838|divalent metal ion transport	GO:0005507|copper ion binding GO:0009055|electron carrier activity	GO:0009507|chloroplast GO:0009543|chloroplast thylakoid lumen GO:0009579|thylakoid GO:0031977|thylakoid lumen
pt2_05107	A	A1S	Potri.002G016100	Potri.002G016100(AS)	POPTR_0002s01750	sp|Q9C5Y0|PLDD1_ARATH	Phospholipase D delta OS=Arabidopsis thaliana GN=PLDDELTA PE=1 SV=2	AT4G35790.2	| Symbols: ATPLDDELTA, PLDDELTA | phospholipase D delta | chr4:16955774-16959875 REVERSE LENGTH=857	LOC_Os09g37100.1	protein|phospholipase D, putative, expressed	IMGA|Medtr5g023050.1	Phospholipase D delta isoform chr5 8894018-8906093 E EGN_Mt100125 20111014	GO:0009409|response to cold GO:0009789|positive regulation of abscisic acid mediated signaling pathway GO:0012501|programmed cell death GO:0046473|phosphatidic acid metabolic process GO:0090333|regulation of stomatal closure	GO:0003824|catalytic activity GO:0004630|phospholipase D activity GO:0005509|calcium ion binding	GO:0005773|vacuole GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0015630|microtubule cytoskeleton GO:0016020|membrane
pt2_05108	A	A1S	Potri.002G016200	Potri.002G016200(AS)	POPTR_0002s01760	sp|P70187|HIAT1_MOUSE	Hippocampus abundant transcript 1 protein OS=Mus musculus GN=Hiat1 PE=2 SV=3	AT2G16980.2	| Symbols: | Major facilitator superfamily protein | chr2:7376376-7380944 FORWARD LENGTH=461	LOC_Os11g05390.1	protein|transporter, major facilitator family, putative, expressed	IMGA|Medtr1g092870.1	Hippocampus abundant transcript-like protein chr1 25973171-25970289 H EGN_Mt100125 20111014	GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process GO:0055085|transmembrane transport	GO:0005215|transporter activity GO:0008493|tetracycline transporter activity	GO:0005576|extracellular region GO:0005886|plasma membrane GO:0016021|integral to membrane
pt2_05109	A	A1S	Potri.002G016300	Potri.002G016300(AS)	POPTR_0002s01780	sp|Q39227|SMT2_ARATH	24-methylenesterol C-methyltransferase 2 OS=Arabidopsis thaliana GN=SMT2 PE=1 SV=2	AT1G20330.1	| Symbols: SMT2, CVP1, FRL1 | sterol methyltransferase 2 | chr1:7038968-7040053 REVERSE LENGTH=361	LOC_Os03g04340.1	protein|C-methyltransferase, putative, expressed	NA	NA	GO:0006007|glucose catabolic process GO:0006084|acetyl-CoA metabolic process GO:0006694|steroid biosynthetic process GO:0007389|pattern specification process GO:0008152|metabolic process GO:0009825|multidimensional cell growth GO:0010051|xylem and phloem pattern formation GO:0016126|sterol biosynthetic process GO:0016132|brassinosteroid biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0032876|negative regulation of DNA endoreduplication	GO:0008168|methyltransferase activity GO:0008757|S-adenosylmethionine-dependent methyltransferase activity	GO:0005783|endoplasmic reticulum GO:0005794|Golgi apparatus
pt2_05110	A	A1S	Potri.002G016400	Potri.002G016400(AS)	POPTR_0002s01790	sp|Q9SGS4|CDSP_ARATH	Thioredoxin-like protein CDSP32, chloroplastic OS=Arabidopsis thaliana GN=CDSP32 PE=1 SV=1	AT1G76080.1	| Symbols: ATCDSP32, CDSP32 | chloroplastic drought-induced stress protein of 32 kD | chr1:28548063-28549348 REVERSE LENGTH=302	LOC_Os07g29410.1	protein|thioredoxin, putative, expressed	NA	NA	GO:0006662|glycerol ether metabolic process GO:0006979|response to oxidative stress GO:0009414|response to water deprivation GO:0045454|cell redox homeostasis	GO:0005515|protein binding GO:0009055|electron carrier activity GO:0015035|protein disulfide oxidoreductase activity	GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope
pt2_05111	A	A1S	Potri.002G016500	Potri.002G016500(AS)	POPTR_0002s01800	sp|Q9SGS5|Y1607_ARATH	Uncharacterized protein At1g76070 OS=Arabidopsis thaliana GN=At1g76070 PE=1 SV=1	AT1G76070.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G20310.1); Has 66 Blast hits to 66 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:28546617-28547435 FORWARD LENGTH=272	LOC_Os09g37080.1	protein|expressed protein	NA	NA	GO:0008150|biological_process GO:0010200|response to chitin GO:0050832|defense response to fungus	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_05112	A	A1S	Potri.002G016600	Potri.002G016600(AS)	POPTR_0002s01810	NA	NA	AT1G76060.1	| Symbols: EMB1793 | LYR family of Fe/S cluster biogenesis protein | chr1:28543367-28543840 REVERSE LENGTH=157	LOC_Os03g04380.1	protein|LYR motif containing protein, putative, expressed	IMGA|Medtr1g026210.1	hypothetical protein chr1 8557105-8556625 F EGN_Mt100125 20111014	NA	GO:0003824|catalytic activity	GO:0005739|mitochondrion
pt2_05113	A	A1S	Potri.002G016700	Potri.002G016700(AS)	POPTR_0002s01820	sp|P54001|P4HA1_RAT	Prolyl 4-hydroxylase subunit alpha-1 OS=Rattus norvegicus GN=P4ha1 PE=2 SV=2	AT1G20270.1	| Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr1:7021383-7022923 REVERSE LENGTH=287	LOC_Os02g58070.1	protein|oxidoreductase, putative, expressed	IMGA|Medtr5g022960.1	Prolyl 4-hydroxylase alpha-2 subunit chr5 8850764-8847420 F EGN_Mt100125 20111014	GO:0018401|peptidyl-proline hydroxylation to 4-hydroxy-L-proline GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0016491|oxidoreductase activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors GO:0031418|L-ascorbic acid binding	GO:0005739|mitochondrion GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_05114	A	A1S	Potri.002G016800	Potri.002G016800(AS)	POPTR_0002s01830	sp|Q3ECD0|PUS2_ARATH	RNA pseudourine synthase 2, chloroplastic OS=Arabidopsis thaliana GN=At1g76050 PE=2 SV=1	AT1G76050.2	| Symbols: | Pseudouridine synthase family protein | chr1:28540858-28542826 FORWARD LENGTH=430	LOC_Os06g50360.1	protein|pseudouridine synthase family protein, putative, expressed	NA	NA	GO:0001522|pseudouridine synthesis GO:0009451|RNA modification	GO:0003723|RNA binding GO:0009982|pseudouridine synthase activity	GO:0009507|chloroplast
pt2_05115	A	A1S	Potri.002G016900	Potri.002G016900(AS)	POPTR_0002s01840	sp|Q9XHM1|EIF3C_MEDTR	Eukaryotic translation initiation factor 3 subunit C OS=Medicago truncatula GN=TIF3C1 PE=2 SV=1	AT3G56150.2	| Symbols: EIF3C | eukaryotic translation initiation factor 3C | chr3:20833790-20836820 REVERSE LENGTH=900	LOC_Os07g03230.2	protein|eukaryotic translation initiation factor 3 subunit C, putative, expressed	NA	NA	GO:0006413|translational initiation	GO:0003743|translation initiation factor activity GO:0005515|protein binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol GO:0005852|eukaryotic translation initiation factor 3 complex
pt2_05116	A	A1S	Potri.002G017000	Potri.002G017000(AS)	POPTR_0002s01850	sp|Q8RWL2|CDPKT_ARATH	Calcium-dependent protein kinase 29 OS=Arabidopsis thaliana GN=CPK29 PE=2 SV=2	AT1G76040.2	| Symbols: CPK29 | calcium-dependent protein kinase 29 | chr1:28537743-28540448 FORWARD LENGTH=561	LOC_Os07g33110.2	protein|CAMK_CAMK_like.33 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	IMGA|Medtr5g092810.1	Calcium dependent protein kinase chr5 39492419-39500200 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004683|calmodulin-dependent protein kinase activity GO:0004713|protein tyrosine kinase activity GO:0005509|calcium ion binding GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005886|plasma membrane
pt2_05117	A	A1S	Potri.002G017100	Potri.002G017100(AS)	POPTR_0002s01860	sp|Q8GT74|NIP2_ARATH	NEP1-interacting protein 2 OS=Arabidopsis thaliana GN=NIP2 PE=1 SV=1	AT2G17730.1	| Symbols: NIP2 | NEP-interacting protein 2 | chr2:7704142-7705312 FORWARD LENGTH=241	LOC_Os10g39770.1	protein|zinc finger, C3HC4 type, domain containing protein, expressed	IMGA|Medtr5g022920.1	RING-H2 finger protein ATL4M chr5 8828671-8826151 F EGN_Mt100125 20111014	GO:0009299|mRNA transcription GO:0009416|response to light stimulus	GO:0005515|protein binding GO:0008270|zinc ion binding	GO:0009535|chloroplast thylakoid membrane GO:0031351|integral to plastid membrane
pt2_05118	A	A1S	Potri.002G017200	Potri.002G017200(AS)	POPTR_0002s01870	sp|Q0JIL1|NRX2_ORYSJ	Probable nucleoredoxin 2 OS=Oryza sativa subsp. japonica GN=Os01g0794400 PE=2 SV=1	AT1G60420.1	| Symbols: | DC1 domain-containing protein | chr1:22261978-22264243 FORWARD LENGTH=578	LOC_Os01g58194.1	protein|protein disulfide isomerase, putative, expressed	NA	NA	GO:0009860|pollen tube growth GO:0010183|pollen tube guidance GO:0045454|cell redox homeostasis GO:0046686|response to cadmium ion GO:0055114|oxidation-reduction process GO:0080092|regulation of pollen tube growth	GO:0016209|antioxidant activity GO:0016491|oxidoreductase activity GO:0047134|protein-disulfide reductase activity	GO:0005829|cytosol
pt2_05119	A	A1S	Potri.002G017300	Potri.002G017300(AS)	POPTR_0002s01880	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05120	A	A1S	Potri.002G017400	Potri.002G017400(AS)	POPTR_0002s01890	sp|Q8L9W3|ATL23_ARATH	E3 ubiquitin-protein ligase ATL23 OS=Arabidopsis thaliana GN=ATL23 PE=1 SV=2	AT5G42200.1	| Symbols: | RING/U-box superfamily protein | chr5:16860523-16861014 FORWARD LENGTH=163	LOC_Os09g29310.1	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr5g024730.1	Ring finger protein chr5 9683574-9684454 F EGN_Mt100125 20111014	GO:0016567|protein ubiquitination	GO:0004842|ubiquitin-protein ligase activity GO:0008270|zinc ion binding	NA
pt2_05121	A	A1S	Potri.002G017500	Potri.002G017500(AS)	POPTR_0002s01900	NA	NA	AT1G20225.1	| Symbols: | Thioredoxin superfamily protein | chr1:7007966-7009318 REVERSE LENGTH=233	LOC_Os09g37020.3	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005773|vacuole GO:0005829|cytosol
pt2_05122	A	A1S	Potri.002G017600	Potri.002G017600(AS)	POPTR_0002s01920	NA	NA	AT1G76010.1	| Symbols: | Alba DNA/RNA-binding protein | chr1:28528505-28530488 REVERSE LENGTH=350	LOC_Os09g37006.2	protein|protein of unknown function domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003676|nucleic acid binding	GO:0005576|extracellular region GO:0005829|cytosol
pt2_05123	A	A1S	Potri.002G017600	Potri.002G017600(AS)	POPTR_0002s01920	NA	NA	AT1G76010.1	| Symbols: | Alba DNA/RNA-binding protein | chr1:28528505-28530488 REVERSE LENGTH=350	LOC_Os09g37006.2	protein|protein of unknown function domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003676|nucleic acid binding	GO:0005576|extracellular region GO:0005829|cytosol
pt2_05124	A	A1S	Potri.002G017700	Potri.002G017700(AS)	POPTR_0002s01930	sp|Q06364|PSMD3_DAUCA	Probable 26S proteasome non-ATPase regulatory subunit 3 OS=Daucus carota GN=21D7 PE=1 SV=2	AT1G20200.1	| Symbols: EMB2719, HAP15 | PAM domain (PCI/PINT associated module) protein | chr1:7001409-7004154 REVERSE LENGTH=488	LOC_Os08g43640.1	protein|26S proteasome non-ATPase regulatory subunit 3, putative, expressed	NA	NA	GO:0006511|ubiquitin-dependent protein catabolic process GO:0006635|fatty acid beta-oxidation GO:0009407|toxin catabolic process GO:0009793|embryo development ending in seed dormancy GO:0042023|DNA endoreduplication GO:0042176|regulation of protein catabolic process GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0043248|proteasome assembly GO:0051510|regulation of unidimensional cell growth GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	GO:0030234|enzyme regulator activity	GO:0000502|proteasome complex GO:0005634|nucleus GO:0005829|cytosol GO:0005886|plasma membrane GO:0008541|proteasome regulatory particle, lid subcomplex GO:0009506|plasmodesma
pt2_05125	A	A1S	Potri.002G017800	Potri.002G017800(AS)	POPTR_0002s01940	sp|Q06364|PSMD3_DAUCA	Probable 26S proteasome non-ATPase regulatory subunit 3 OS=Daucus carota GN=21D7 PE=1 SV=2	AT1G75990.1	| Symbols: | PAM domain (PCI/PINT associated module) protein | chr1:28524623-28526718 REVERSE LENGTH=487	LOC_Os08g43640.2	protein|26S proteasome non-ATPase regulatory subunit 3, putative, expressed	NA	NA	GO:0006511|ubiquitin-dependent protein catabolic process GO:0030163|protein catabolic process GO:0042023|DNA endoreduplication GO:0042176|regulation of protein catabolic process GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0043248|proteasome assembly GO:0051510|regulation of unidimensional cell growth GO:0051788|response to misfolded protein	GO:0030234|enzyme regulator activity	GO:0000502|proteasome complex GO:0005634|nucleus GO:0005829|cytosol GO:0005886|plasma membrane GO:0008541|proteasome regulatory particle, lid subcomplex GO:0016020|membrane
pt2_05126	A	A2S	Potri.002G017900	Potri.002G017900(AS) Potri.005G244100(DS)	POPTR_0002s01950	sp|Q9LNU3|EXP11_ARATH	Expansin-A11 OS=Arabidopsis thaliana GN=EXPA11 PE=2 SV=1	AT1G20190.1	| Symbols: ATEXPA11, EXP11, ATEXP11, ATHEXP ALPHA 1.14, EXPA11 | expansin 11 | chr1:6998762-6999710 REVERSE LENGTH=252	LOC_Os04g15840.1	protein|expansin precursor, putative, expressed	IMGA|Medtr5g041700.1	Expansin chr5 17886520-17884348 F EGN_Mt100125 20111014	GO:0009664|plant-type cell wall organization GO:0009826|unidimensional cell growth GO:0009828|plant-type cell wall loosening GO:0009831|plant-type cell wall modification involved in multidimensional cell growth	NA	GO:0005576|extracellular region GO:0005618|cell wall
pt2_05127	A	A1S	Potri.002G018000	Potri.002G018000(AS)	POPTR_0002s01960	sp|Q43872|PER64_ARATH	Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=1 SV=1	AT5G42180.1	| Symbols: | Peroxidase superfamily protein | chr5:16852702-16854021 FORWARD LENGTH=317	LOC_Os02g58720.1	protein|peroxidase precursor, putative, expressed	IMGA|Medtr1g025980.1	Peroxidase chr1 8471540-8470286 H EGN_Mt100125 20111014	GO:0006979|response to oxidative stress GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process GO:0055114|oxidation-reduction process	GO:0004601|peroxidase activity GO:0020037|heme binding	GO:0005576|extracellular region GO:0009505|plant-type cell wall
pt2_05128	A	A2S	Potri.002G018100	Potri.002G018100(AS) Potri.005G243900(DS)	POPTR_0002s01970	sp|Q80ZQ9|F206A_MOUSE	Protein FAM206A OS=Mus musculus GN=Fam206a PE=2 SV=2	AT1G75980.1	| Symbols: | Single hybrid motif superfamily protein | chr1:28522936-28524302 REVERSE LENGTH=225	LOC_Os02g02810.1	protein|expressed protein	NA	NA	GO:0006546|glycine catabolic process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005960|glycine cleavage complex
pt2_05129	A	A1S	Potri.002G018100	Potri.002G018100(AS)	POPTR_0002s01970	sp|Q80ZQ9|F206A_MOUSE	Protein FAM206A OS=Mus musculus GN=Fam206a PE=2 SV=2	AT1G75980.1	| Symbols: | Single hybrid motif superfamily protein | chr1:28522936-28524302 REVERSE LENGTH=225	LOC_Os02g02810.1	protein|expressed protein	NA	NA	GO:0006546|glycine catabolic process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005960|glycine cleavage complex
pt2_05130	A	A1S	Potri.002G018200	Potri.002G018200(AS)	POPTR_0002s01980	sp|Q6DYE5|U496K_ARATH	UPF0496 protein At1g20180 OS=Arabidopsis thaliana GN=At1g20180 PE=2 SV=2	AT1G20180.1	| Symbols: | Protein of unknown function (DUF677) | chr1:6996354-6997779 FORWARD LENGTH=390	LOC_Os03g05440.1	protein|DUF677 domain containing protein, putative, expressed	IMGA|Medtr1g025960.1	hypothetical protein chr1 8466145-8467780 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_05131	A	A1S	Potri.002G018300	Potri.002G018300(AS)	POPTR_0002s01990	sp|Q7XWU3|CADH6_ORYSJ	Probable cinnamyl alcohol dehydrogenase 6 OS=Oryza sativa subsp. japonica GN=CAD6 PE=2 SV=2	AT4G39330.1	| Symbols: ATCAD9, CAD9 | cinnamyl alcohol dehydrogenase 9 | chr4:18291268-18292772 FORWARD LENGTH=360	LOC_Os04g15920.1	protein|dehydrogenase, putative, expressed	IMGA|Medtr5g031250.1	Mannitol dehydrogenase chr5 12966785-12968382 F EGN_Mt100125 20111014	GO:0009809|lignin biosynthetic process GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0008270|zinc ion binding GO:0016491|oxidoreductase activity GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups GO:0045551|cinnamyl-alcohol dehydrogenase activity	GO:0005737|cytoplasm GO:0048046|apoplast
pt2_05132	A	A1S	Potri.002G018400	Potri.002G018400(AS)	POPTR_0002s02000	NA	NA	AT2G17770.1	| Symbols: ATBZIP27, FDP, BZIP27 | basic region/leucine zipper motif 27 | chr2:7723103-7723573 FORWARD LENGTH=156	NA	NA	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0009410|response to xenobiotic stimulus GO:0009909|regulation of flower development GO:0010200|response to chitin GO:0030968|endoplasmic reticulum unfolded protein response GO:0048573|photoperiodism, flowering	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_05133	A	A1S	Potri.002G018600	Potri.002G018600(AS)	POPTR_0002s02010	sp|Q39547|CUCM1_CUCME	Cucumisin OS=Cucumis melo PE=1 SV=1	AT1G20160.1	| Symbols: ATSBT5.2 | Subtilisin-like serine endopeptidase family protein | chr1:6990852-6993854 REVERSE LENGTH=769	LOC_Os09g30458.1	protein|subtilisin-like protease, putative, expressed	IMGA|Medtr5g025010.1	Subtilisin-like protease chr5 9863093-9866617 E EGN_Mt100125 20111014	GO:0006508|proteolysis GO:0008152|metabolic process GO:0043086|negative regulation of catalytic activity	GO:0004252|serine-type endopeptidase activity GO:0042802|identical protein binding	GO:0005576|extracellular region GO:0005618|cell wall GO:0048046|apoplast
pt2_05134	A	A1S	Potri.002G018700	Potri.002G018700(AS)	POPTR_0002s02020	sp|Q9FHW7|SKP1B_ARATH	SKP1-like protein 1B OS=Arabidopsis thaliana GN=SKP1B PE=1 SV=1	AT5G42190.1	| Symbols: ASK2, SKP1B | E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein | chr5:16854495-16855516 REVERSE LENGTH=171	LOC_Os09g36830.1	protein|Skp1 family, dimerisation domain containing protein, expressed	IMGA|Medtr5g022710.1	SKP1-like protein chr5 8724609-8726529 F EGN_Mt100125 20111014	GO:0006511|ubiquitin-dependent protein catabolic process GO:0009793|embryo development ending in seed dormancy GO:0042023|DNA endoreduplication GO:0042752|regulation of circadian rhythm GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0043248|proteasome assembly GO:0051510|regulation of unidimensional cell growth GO:0051788|response to misfolded protein	GO:0004842|ubiquitin-protein ligase activity GO:0005515|protein binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0019005|SCF ubiquitin ligase complex
pt2_05135	A	A1S	Potri.002G018800	Potri.002G018800(AS)	POPTR_0002s02030	sp|Q94CH6|EXL3_ARATH	GDSL esterase/lipase EXL3 OS=Arabidopsis thaliana GN=EXL3 PE=2 SV=1	AT1G75900.1	| Symbols: | GDSL-like Lipase/Acylhydrolase superfamily protein | chr1:28499179-28500943 FORWARD LENGTH=364	LOC_Os02g01140.1	protein|GDSL-like lipase/acylhydrolase, putative, expressed	IMGA|Medtr1g025720.1	GDSL esterase/lipase chr1 8361727-8364675 E EGN_Mt100125 20111014	GO:0006629|lipid metabolic process GO:0019761|glucosinolate biosynthetic process GO:0019953|sexual reproduction	GO:0004091|carboxylesterase activity GO:0016298|lipase activity GO:0016746|transferase activity, transferring acyl groups GO:0016788|hydrolase activity, acting on ester bonds	GO:0005576|extracellular region
pt2_05136	A	A1S	Potri.002G018900	Potri.002G018900(AS)	POPTR_0002s02040	sp|Q8IZQ1|WDFY3_HUMAN	WD repeat and FYVE domain-containing protein 3 OS=Homo sapiens GN=WDFY3 PE=1 SV=2	AT1G20110.1	| Symbols: | RING/FYVE/PHD zinc finger superfamily protein | chr1:6971554-6974578 FORWARD LENGTH=601	LOC_Os06g50840.1	protein|zinc finger family protein, putative, expressed	NA	NA	GO:0006623|protein targeting to vacuole GO:0006944|cellular membrane fusion GO:0007165|signal transduction GO:0016192|vesicle-mediated transport GO:0016197|endosomal transport	GO:0035091|phosphatidylinositol binding GO:0046872|metal ion binding	GO:0005634|nucleus
pt2_05137	B	B1S	Potri.002G019000	Potri.002G019000(BS)	POPTR_0002s02050	NA	NA	AT4G35070.1	| Symbols: | SBP (S-ribonuclease binding protein) family protein | chr4:16694488-16695387 FORWARD LENGTH=265	LOC_Os04g32980.1	protein|protein binding protein, putative, expressed	IMGA|Medtr5g013690.1	Baculoviral IAP repeat-containing protein chr5 4147917-4149745 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005737|cytoplasm
pt2_05138	C	C1S	Potri.002G019100	Potri.002G019100(CS)	NA	NA	AT5G42150.1	| Symbols: | Glutathione S-transferase family protein | chr5:16846247-16847909 FORWARD LENGTH=315	LOC_Os04g17050.1	protein|glutaredoxin family protein, expressed	NA	NA	GO:0006626|protein targeting to mitochondrion GO:0009407|toxin catabolic process GO:0010583|response to cyclopentenone GO:0045454|cell redox homeostasis	GO:0009055|electron carrier activity GO:0015035|protein disulfide oxidoreductase activity	GO:0005739|mitochondrion
pt2_05139	A	A1S	Potri.002G019200	Potri.002G019200(AS)	POPTR_0002s02070	NA	NA	AT1G75860.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G20100.1); Has 258 Blast hits to 235 proteins in 58 species: Archae - 0; Bacteria - 4; Metazoa - 59; Fungi - 16; Plants - 90; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink). | chr1:28484255-28485743 REVERSE LENGTH=297	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05140	A	A1S	Potri.002G019300	Potri.002G019300(AS)	POPTR_0002s02080	sp|Q8H1D6|RBK1_ARATH	Receptor-like cytosolic serine/threonine-protein kinase RBK1 OS=Arabidopsis thaliana GN=RBK1 PE=1 SV=1	AT4G35030.3	| Symbols: | Protein kinase superfamily protein | chr4:16676234-16677962 FORWARD LENGTH=448	LOC_Os03g13820.1	protein|protein kinase family protein, putative, expressed	IMGA|Medtr5g031870.1	Cysteine-rich receptor-like protein kinase chr5 13243275-13248409 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0009734|auxin mediated signaling pathway	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005575|cellular_component GO:0005634|nucleus GO:0005886|plasma membrane
pt2_05141	A	A1S	Potri.002G019400	Potri.002G019400(AS)	POPTR_0002s02090	sp|F4I0P8|VP35B_ARATH	Vacuolar protein sorting-associated protein 35B OS=Arabidopsis thaliana GN=VPS35B PE=1 SV=1	AT1G75850.1	| Symbols: VPS35B | VPS35 homolog B | chr1:28478053-28483874 REVERSE LENGTH=790	LOC_Os03g58700.1	protein|vacuolar protein sorting-associated protein 35, putative, expressed	IMGA|Medtr1g025610.1	Vacuolar protein sorting chr1 8313948-8304257 E EGN_Mt100125 20111014	GO:0006886|intracellular protein transport GO:0042147|retrograde transport, endosome to Golgi	NA	NA
pt2_05142	A	A3S	Potri.002G019500	Potri.002G019500(AS) Potri.007G061500(DS) Potri.005G110700(DS)	POPTR_0002s02100	sp|O04369|RAC1_LOTJA	Rac-like GTP-binding protein RAC1 OS=Lotus japonicus GN=RAC1 PE=2 SV=1	AT1G75840.1	| Symbols: ARAC5, ATGP3, ROP4, ATROP4 | RAC-like GTP binding protein 5 | chr1:28475964-28477377 FORWARD LENGTH=196	LOC_Os02g58730.1	protein|ras-related protein, putative, expressed	IMGA|Medtr5g022600.1	Rac-like GTP-binding protein chr5 8656572-8659385 F EGN_Mt100125 20111014	GO:0000226|microtubule cytoskeleton organization GO:0000271|polysaccharide biosynthetic process GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0006184|GTP catabolic process GO:0007015|actin filament organization GO:0007165|signal transduction GO:0007264|small GTPase mediated signal transduction GO:0009086|methionine biosynthetic process GO:0009825|multidimensional cell growth GO:0009860|pollen tube growth GO:0009932|cell tip growth GO:0010817|regulation of hormone levels GO:0015031|protein transport GO:0040007|growth GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0048767|root hair elongation GO:0071555|cell wall organization	GO:0003924|GTPase activity GO:0005515|protein binding GO:0005525|GTP binding GO:0019901|protein kinase binding	GO:0005622|intracellular GO:0005634|nucleus GO:0005730|nucleolus GO:0005737|cytoplasm GO:0005819|spindle GO:0005886|plasma membrane GO:0009524|phragmoplast GO:0016020|membrane GO:0030427|site of polarized growth
pt2_05143	A	A1S	Potri.002G019600	Potri.002G019600(AS)	POPTR_0002s02110	sp|Q9C7F8|AB13B_ARATH	ABC transporter B family member 13 OS=Arabidopsis thaliana GN=ABCB13 PE=3 SV=1	AT1G27940.1	| Symbols: PGP13 | P-glycoprotein 13 | chr1:9733597-9738129 REVERSE LENGTH=1245	LOC_Os04g38570.1	protein|multidrug resistance protein, putative, expressed	IMGA|Medtr1g025560.1	ABC transporter B family member chr1 8289514-8294796 H EGN_Mt100125 20111014	GO:0006200|ATP catabolic process GO:0006810|transport GO:0010048|vernalization response GO:0010315|auxin efflux GO:0010540|basipetal auxin transport GO:0010541|acropetal auxin transport GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0048440|carpel development GO:0055085|transmembrane transport	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0005634|nucleus GO:0005886|plasma membrane GO:0016021|integral to membrane
pt2_05144	A	A1S	Potri.002G019700	Potri.002G019700(AS)	POPTR_0002s02120	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process GO:0009860|pollen tube growth	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_05145	A	A1S	Potri.002G019800	Potri.002G019800(AS)	POPTR_0002s02130	sp|Q5M7N9|ESYT3_XENTR	Extended synaptotagmin-3 OS=Xenopus tropicalis GN=esyt3 PE=2 SV=1	AT1G20080.1	| Symbols: SYTB, ATSYTB, NTMC2TYPE1.2, NTMC2T1.2, SYT2 | Calcium-dependent lipid-binding (CaLB domain) family protein | chr1:6962236-6964912 FORWARD LENGTH=537	LOC_Os02g25060.1	protein|NTMC2Type1.2 protein, putative, expressed	IMGA|Medtr1g094810.1	Synaptotagmin-1 chr1 26931190-26935882 H EGN_Mt100125 20111014	GO:0009306|protein secretion	GO:0003674|molecular_function	GO:0005794|Golgi apparatus GO:0005886|plasma membrane
pt2_05146	A	A1S	Potri.002G019900	Potri.002G019900(AS)	POPTR_0002s02140	sp|Q9SYQ8|CLV1_ARATH	Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3	AT1G75820.1	| Symbols: CLV1, FAS3, FLO5, ATCLV1 | Leucine-rich receptor-like protein kinase family protein | chr1:28463631-28466652 REVERSE LENGTH=980	LOC_Os03g56270.2	protein|receptor protein kinase CLAVATA1 precursor, putative, expressed	IMGA|Medtr5g014700.1	Receptor-like protein kinase chr5 4720029-4729895 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway GO:0007172|signal complex assembly GO:0009934|regulation of meristem structural organization GO:0030154|cell differentiation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004702|receptor signaling protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005515|protein binding GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0033612|receptor serine/threonine kinase binding GO:0043621|protein self-association	GO:0005886|plasma membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_05147	A	A2S	Potri.002G020000	Potri.002G020000(AS) Potri.005G241400(DS)	POPTR_0002s02150	NA	NA	AT4G24200.1	| Symbols: | Transcription elongation factor (TFIIS) family protein | chr4:12556927-12559929 REVERSE LENGTH=1000	LOC_Os06g42490.1	protein|expressed protein	NA	NA	GO:0006351|transcription, DNA-dependent	GO:0003677|DNA binding	GO:0005634|nucleus GO:0005739|mitochondrion
pt2_05148	A	A1S	Potri.002G020100	Potri.002G020100(AS)	POPTR_0002s02160	sp|Q9ZRZ8|RH28_ARATH	DEAD-box ATP-dependent RNA helicase 28 OS=Arabidopsis thaliana GN=RH28 PE=2 SV=1	AT4G16630.1	| Symbols: | DEA(D/H)-box RNA helicase family protein | chr4:9362176-9366449 REVERSE LENGTH=789	LOC_Os12g29660.1	protein|DEAD-box ATP-dependent RNA helicase, putative, expressed	NA	NA	NA	GO:0003676|nucleic acid binding GO:0004386|helicase activity GO:0005524|ATP binding GO:0008026|ATP-dependent helicase activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05149	D	D1S	Potri.002G020200	Potri.002G020200(DS)	POPTR_0002s02170	NA	NA	AT1G75810.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 13 Blast hits to 13 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:28461747-28462124 FORWARD LENGTH=125	NA	NA	IMGA|Medtr1g025490.1	hypothetical protein chr1 8262838-8263341 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_05150	A	A2S	Potri.002G020300	Potri.002G020300(AS) Potri.005G241100(DA)	POPTR_0002s02180	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05151	A	A1S	Potri.002G020400	Potri.002G020400(AS)	POPTR_0002s02190	sp|P50699|TLPH_ARATH	Thaumatin-like protein OS=Arabidopsis thaliana GN=At1g18250 PE=2 SV=2	AT4G38660.1	| Symbols: | Pathogenesis-related thaumatin superfamily protein | chr4:18066448-18067984 REVERSE LENGTH=345	LOC_Os09g36580.1	protein|thaumatin, putative, expressed	IMGA|Medtr5g022350.1	Thaumatin-like protein chr5 8552692-8554265 F EGN_Mt100125 20111014	GO:0009664|plant-type cell wall organization GO:0010075|regulation of meristem growth GO:0042545|cell wall modification GO:0048653|anther development GO:0051707|response to other organism	GO:0003674|molecular_function	GO:0005576|extracellular region GO:0031225|anchored to membrane
pt2_05152	A	A1S	Potri.002G020500	Potri.002G020500(AS)	POPTR_0002s02200	sp|P83332|TLP1_PRUPE	Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1	AT1G75800.1	| Symbols: | Pathogenesis-related thaumatin superfamily protein | chr1:28458889-28460447 FORWARD LENGTH=330	LOC_Os10g05660.1	protein|thaumatin, putative, expressed	IMGA|Medtr5g022310.1	Thaumatin-like protein chr5 8540196-8542249 F EGN_Mt100125 20111014	GO:0051707|response to other organism	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_05153	A	A1S	Potri.002G020600	Potri.002G020600(AS)	POPTR_0002s02210	NA	NA	AT4G24175.1	| Symbols: | unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0307 (InterPro:IPR006839); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:12547018-12548810 FORWARD LENGTH=306	LOC_Os04g24410.1	protein|kinesin heavy chain isolog, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_05154	A	A1S	Potri.002G020700	Potri.002G020700(AS)	POPTR_0002s02220	sp|Q9FYB5|DNJ11_ARATH	Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana GN=ATJ11 PE=1 SV=2	AT2G17880.1	| Symbols: | Chaperone DnaJ-domain superfamily protein | chr2:7767176-7767658 REVERSE LENGTH=160	LOC_Os08g43490.1	protein|heat shock protein DnaJ, putative, expressed	IMGA|Medtr5g022130.1	Chaperone protein dnaJ chr5 8438448-8439290 F EGN_Mt100125 20111014	GO:0006457|protein folding GO:0009744|response to sucrose stimulus GO:0009750|response to fructose stimulus	GO:0031072|heat shock protein binding	GO:0009507|chloroplast
pt2_05155	G	G1	NA	NA	POPTR_0002s02230	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05156	A	A2S	Potri.002G020800	Potri.002G020800(AS) Potri.005G240700(BS)	POPTR_0002s02240	sp|Q9FYB5|DNJ11_ARATH	Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana GN=ATJ11 PE=1 SV=2	AT2G17880.1	| Symbols: | Chaperone DnaJ-domain superfamily protein | chr2:7767176-7767658 REVERSE LENGTH=160	LOC_Os08g43490.1	protein|heat shock protein DnaJ, putative, expressed	IMGA|Medtr5g022180.1	DnaJ-like protein chr5 8450148-8450913 F EGN_Mt100125 20111014	GO:0006457|protein folding GO:0009744|response to sucrose stimulus GO:0009750|response to fructose stimulus	GO:0031072|heat shock protein binding	GO:0009507|chloroplast
pt2_05157	B	B1S	Potri.002G020900	Potri.002G020900(BS)	POPTR_0002s02250	sp|Q54XX1|SRPRB_DICDI	Signal recognition particle receptor subunit beta OS=Dictyostelium discoideum GN=srprb PE=3 SV=1	AT5G05670.1	| Symbols: | signal recognition particle binding | chr5:1695916-1697534 REVERSE LENGTH=260	LOC_Os08g41250.1	protein|signal recognition particle receptor subunit beta, putative, expressed	IMGA|Medtr5g033930.1	Signal recognition particle receptor subunit beta chr5 14239198-14242221 E EGN_Mt100125 20111014	GO:0006302|double-strand break repair GO:0006312|mitotic recombination GO:0007062|sister chromatid cohesion GO:0007129|synapsis GO:0007131|reciprocal meiotic recombination GO:0007264|small GTPase mediated signal transduction GO:0009560|embryo sac egg cell differentiation GO:0009855|determination of bilateral symmetry GO:0009909|regulation of flower development GO:0009944|polarity specification of adaxial/abaxial axis GO:0010014|meristem initiation GO:0010075|regulation of meristem growth GO:0016126|sterol biosynthetic process GO:0016570|histone modification GO:0031507|heterochromatin assembly GO:0042138|meiotic DNA double-strand break formation GO:0045132|meiotic chromosome segregation GO:0045787|positive regulation of cell cycle GO:0046520|sphingoid biosynthetic process GO:0048449|floral organ formation	GO:0005047|signal recognition particle binding GO:0005525|GTP binding	GO:0005622|intracellular GO:0005737|cytoplasm GO:0005783|endoplasmic reticulum GO:0005886|plasma membrane
pt2_05158	A	A1S	Potri.002G021000	Potri.002G021000(AS)	POPTR_0002s02260	sp|Q9SU40|SKU5_ARATH	Monocopper oxidase-like protein SKU5 OS=Arabidopsis thaliana GN=SKU5 PE=1 SV=1	AT1G75790.1	| Symbols: sks18 | SKU5 similar 18 | chr1:28454980-28457388 REVERSE LENGTH=545	LOC_Os08g05820.1	protein|monocopper oxidase, putative, expressed	IMGA|Medtr5g018270.1	L-ascorbate oxidase-like protein chr5 6538701-6543083 F EGN_Mt100125 20111014	GO:0010584|pollen exine formation GO:0055114|oxidation-reduction process	GO:0005507|copper ion binding GO:0016491|oxidoreductase activity GO:0030599|pectinesterase activity	GO:0005576|extracellular region
pt2_05159	A	A1S	Potri.002G021100	Potri.002G021100(AS)	POPTR_0002s02270	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05160	A	A1S	Potri.002G021200	Potri.002G021200(AS)	POPTR_0002s02280	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05161	A	A1S	Potri.002G021300	Potri.002G021300(AS)	POPTR_0002s02290	sp|Q9LNU6|PPR53_ARATH	Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2	AT1G20230.1	| Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:7009570-7011852 FORWARD LENGTH=760	LOC_Os05g30710.1	protein|pentatricopeptide, putative, expressed	IMGA|Medtr5g008600.1	Pentatricopeptide repeat-containing protein chr5 1604164-1608184 H EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005575|cellular_component
pt2_05162	B	B1S	Potri.002G021400	Potri.002G021400(BS)	POPTR_0002s02300	NA	NA	AT1G30755.1	| Symbols: | Protein of unknown function (DUF668) | chr1:10905991-10908773 REVERSE LENGTH=615	LOC_Os01g65330.1	protein|expressed protein	IMGA|Medtr1g025340.1	hypothetical protein chr1 8196196-8201985 E EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05163	A	A1S	Potri.002G021500	Potri.002G021500(AS)	POPTR_0002s02310	sp|Q39613|CYPH_CATRO	Peptidyl-prolyl cis-trans isomerase OS=Catharanthus roseus GN=PCKR1 PE=2 SV=1	AT2G16600.1	| Symbols: ROC3 | rotamase CYP 3 | chr2:7200862-7201383 FORWARD LENGTH=173	LOC_Os02g02890.1	protein|peptidyl-prolyl cis-trans isomerase, putative, expressed	IMGA|AC225458_18.1	Peptidyl-prolyl cis-trans isomerase AC225458.11 44405-42269 E EGN_Mt100125 20111014	GO:0006457|protein folding GO:0007165|signal transduction	GO:0003755|peptidyl-prolyl cis-trans isomerase activity	GO:0005737|cytoplasm GO:0005794|Golgi apparatus GO:0005829|cytosol GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0009507|chloroplast
pt2_05164	R	R	NA	NA	POPTR_0002s02320	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05165	A	A2S	Potri.002G021700	Potri.002G021700(AS) Potri.005G240000(DS)	POPTR_0002s02330	sp|Q6DJ78|BRE_XENTR	BRCA1-A complex subunit BRE OS=Xenopus tropicalis GN=bre PE=2 SV=1	AT5G42470.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Brain/reproductive organ-expressed protein (InterPro:IPR010358); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr5:16982365-16984738 FORWARD LENGTH=382	LOC_Os06g50170.1	protein|BRE, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_05166	A	A2S	Potri.002G021800	Potri.002G021800(AS) Potri.005G239900(DS)	POPTR_0002s02340	sp|Q9ZRB0|TBB3_WHEAT	Tubulin beta-3 chain OS=Triticum aestivum GN=TUBB3 PE=2 SV=1	AT1G20010.1	| Symbols: TUB5 | tubulin beta-5 chain | chr1:6938033-6940481 REVERSE LENGTH=449	LOC_Os06g46000.1	protein|tubulin/FtsZ domain containing protein, putative, expressed	IMGA|contig_53526_2.1	Tubulin beta chain contig_53526 5156-2874 H PREDN 20111014	GO:0006094|gluconeogenesis GO:0006184|GTP catabolic process GO:0007010|cytoskeleton organization GO:0010498|proteasomal protein catabolic process GO:0051258|protein polymerization	GO:0003924|GTPase activity GO:0005198|structural molecule activity GO:0005200|structural constituent of cytoskeleton GO:0005525|GTP binding	GO:0005618|cell wall GO:0005737|cytoplasm GO:0005774|vacuolar membrane GO:0005874|microtubule GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0016020|membrane GO:0043234|protein complex GO:0045298|tubulin complex
pt2_05167	A	A1S	Potri.002G021900	Potri.002G021900(AS)	POPTR_0002s02350	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05168	A	A1S	Potri.002G022000	Potri.002G022000(AS)	POPTR_0002s02360	NA	NA	AT5G11600.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:3733815-3735015 REVERSE LENGTH=242	LOC_Os05g51754.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05169	A	A1S	Potri.002G022100	Potri.002G022100(AS)	POPTR_0002s02370	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_05170	A	A1S	Potri.002G022200	Potri.002G022200(AS)	POPTR_0002s02380	NA	NA	AT1G19980.1	| Symbols: | cytomatrix protein-related | chr1:6933162-6934643 FORWARD LENGTH=342	LOC_Os04g02680.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005886|plasma membrane
pt2_05171	A	A1S	Potri.002G022300	Potri.002G022300(AS)	POPTR_0002s02390	sp|P48583|ERD2_CAEEL	ER lumen protein retaining receptor OS=Caenorhabditis elegans GN=erd-2 PE=2 SV=2	AT1G75760.1	| Symbols: | ER lumen protein retaining receptor family protein | chr1:28446940-28448421 REVERSE LENGTH=272	LOC_Os08g43470.1	protein|ER lumen protein retaining receptor, putative, expressed	IMGA|contig_77467_1.1	ER lumen retaining receptor family-like protein contig_77467 210-1675 H PREDN 20111014	GO:0006007|glucose catabolic process GO:0006621|protein retention in ER lumen GO:0015031|protein transport	GO:0004872|receptor activity GO:0046923|ER retention sequence binding	GO:0016021|integral to membrane
pt2_05172	A	A1S	Potri.002G022400	Potri.002G022400(AS)	POPTR_0002s02400	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05173	A	A1S	Potri.002G022500	Potri.002G022500(AS)	POPTR_0002s02410	sp|Q93X17|SNAK2_SOLTU	Snakin-2 OS=Solanum tuberosum GN=SN2 PE=1 SV=1	AT2G18420.1	| Symbols: | Gibberellin-regulated family protein | chr2:7993861-7994334 FORWARD LENGTH=94	LOC_Os05g35690.1	protein|GASR6 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed	IMGA|Medtr5g036720.1	GAST1 chr5 15620417-15621010 H EGN_Mt100125 20111014	GO:0009739|response to gibberellin stimulus	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_05174	A	A1S	Potri.002G022600	Potri.002G022600(AS)	POPTR_0002s02420	sp|Q93X17|SNAK2_SOLTU	Snakin-2 OS=Solanum tuberosum GN=SN2 PE=1 SV=1	AT1G75750.1	| Symbols: GASA1 | GAST1 protein homolog 1 | chr1:28441813-28442284 REVERSE LENGTH=98	LOC_Os05g35690.1	protein|GASR6 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed	IMGA|Medtr5g036880.1	Gibberellin-regulated protein chr5 15673638-15674216 H EGN_Mt100125 20111014	GO:0000271|polysaccharide biosynthetic process GO:0006569|tryptophan catabolic process GO:0009684|indoleacetic acid biosynthetic process GO:0009737|response to abscisic acid stimulus GO:0009739|response to gibberellin stimulus GO:0009741|response to brassinosteroid stimulus GO:0009825|multidimensional cell growth GO:0009826|unidimensional cell growth GO:0009932|cell tip growth GO:0010817|regulation of hormone levels GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0048767|root hair elongation GO:0071555|cell wall organization	GO:0003674|molecular_function	GO:0005576|extracellular region GO:0005618|cell wall GO:0009505|plant-type cell wall
pt2_05175	B	B1S	Potri.002G022700	Potri.002G022700(BS)	POPTR_0002s02430	sp|Q93X17|SNAK2_SOLTU	Snakin-2 OS=Solanum tuberosum GN=SN2 PE=1 SV=1	AT1G75750.2	| Symbols: GASA1 | GAST1 protein homolog 1 | chr1:28441813-28442284 REVERSE LENGTH=97	LOC_Os05g35690.1	protein|GASR6 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed	IMGA|Medtr5g036720.1	GAST1 chr5 15620417-15621010 H EGN_Mt100125 20111014	GO:0000271|polysaccharide biosynthetic process GO:0006569|tryptophan catabolic process GO:0009684|indoleacetic acid biosynthetic process GO:0009737|response to abscisic acid stimulus GO:0009739|response to gibberellin stimulus GO:0009741|response to brassinosteroid stimulus GO:0009825|multidimensional cell growth GO:0009826|unidimensional cell growth GO:0009932|cell tip growth GO:0010817|regulation of hormone levels GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0048767|root hair elongation GO:0071555|cell wall organization	GO:0003674|molecular_function	GO:0005576|extracellular region GO:0005618|cell wall GO:0009505|plant-type cell wall
pt2_05176	A	A1S	Potri.002G022800	Potri.002G022800(AS)	POPTR_0002s02440	NA	NA	AT1G75730.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages. | chr1:28435991-28438983 REVERSE LENGTH=589	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_05177	A	A2S	Potri.002G022900	Potri.002G022900(AS) Potri.005G238700(DS)	POPTR_0002s02450	sp|Q84WL9|AP2S_ARATH	AP-2 complex subunit sigma OS=Arabidopsis thaliana GN=AP17 PE=2 SV=1	AT1G47830.1	| Symbols: | SNARE-like superfamily protein | chr1:17613346-17614784 REVERSE LENGTH=142	LOC_Os12g10560.1	protein|clathrin adaptor complex small chain domain containing protein, expressed	IMGA|Medtr1g025190.1	AP-2 complex subunit sigma-1 chr1 8135643-8132942 F EGN_Mt100125 20111014	GO:0006810|transport GO:0006886|intracellular protein transport GO:0015031|protein transport	GO:0008565|protein transporter activity	GO:0005794|Golgi apparatus GO:0030125|clathrin vesicle coat
pt2_05178	A	A1S	Potri.002G023000	Potri.002G023000(AS)	POPTR_0002s02460	sp|F4I0N3|Y1572_ARATH	WEB family protein At1g75720 OS=Arabidopsis thaliana GN=At1g75720 PE=2 SV=1	AT1G75720.2	| Symbols: | Plant protein of unknown function (DUF827) | chr1:28434648-28435321 REVERSE LENGTH=193	LOC_Os04g02650.1	protein|expressed protein	IMGA|Medtr5g021990.1	hypothetical protein chr5 8328687-8327550 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_05179	G	G1	NA	NA	POPTR_0002s02470	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05180	A	A2S	Potri.002G023200	Potri.002G023200(AS) Potri.005G238300(DS)	POPTR_0002s02480	NA	NA	AT1G75710.1	| Symbols: | C2H2-like zinc finger protein | chr1:28428806-28431128 FORWARD LENGTH=462	LOC_Os04g59380.1	protein|ZOS4-14 - C2H2 zinc finger protein, expressed	IMGA|AC229724_1046.1	C2H2 zinc finger protein AC229724.12 177025-179406 F EGN_Mt100125 20111014	NA	GO:0003676|nucleic acid binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_05181	A	A1S	Potri.002G023300	Potri.002G023300(AS)	POPTR_0002s02490	sp|Q54UB1|TRM6_DICDI	tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit trm6 OS=Dictyostelium discoideum GN=trmt6 PE=3 SV=1	AT2G45730.1	| Symbols: | eukaryotic initiation factor 3 gamma subunit family protein | chr2:18836519-18839123 REVERSE LENGTH=446	LOC_Os04g02150.2	protein|tRNA methyltransferase, putative, expressed	IMGA|Medtr1g024920.1	tRNA (adenine-N(1)-)-methyltransferase non-catalytic subunit trm6 chr1 8019718-8027133 F EGN_Mt100125 20111014	GO:0006396|RNA processing GO:0006413|translational initiation GO:0006446|regulation of translational initiation GO:0006606|protein import into nucleus GO:0009220|pyrimidine ribonucleotide biosynthetic process	GO:0003743|translation initiation factor activity	GO:0005634|nucleus
pt2_05182	A	A1S	Potri.002G023400	Potri.002G023400(AS)	POPTR_0002s02500	sp|Q9FV70|E2FC_ARATH	Transcription factor E2FC OS=Arabidopsis thaliana GN=E2FC PE=1 SV=1	AT1G47870.1	| Symbols: E2FC, ATE2F2, ATE2FC | winged-helix DNA-binding transcription factor family protein | chr1:17634937-17637557 FORWARD LENGTH=396	LOC_Os02g33430.2	protein|E2F family transcription factor protein, putative, expressed	IMGA|Medtr1g105110.1	Transcription factor E2F5 chr1 31001177-31006710 E EGN_Mt100125 20111014	GO:0000902|cell morphogenesis GO:0006302|double-strand break repair GO:0006355|regulation of transcription, DNA-dependent GO:0010090|trichome morphogenesis GO:0010332|response to gamma radiation GO:0042023|DNA endoreduplication GO:0051302|regulation of cell division GO:0051782|negative regulation of cell division	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0046982|protein heterodimerization activity	GO:0005634|nucleus GO:0005667|transcription factor complex GO:0005730|nucleolus
pt2_05183	A	A1S	Potri.002G023500	Potri.002G023500(AS)	POPTR_0002s02510	sp|Q8LE10|HA22I_ARATH	HVA22-like protein i OS=Arabidopsis thaliana GN=HVA22I PE=2 SV=2	AT5G42560.1	| Symbols: | Abscisic acid-responsive (TB2/DP1, HVA22) family protein | chr5:17015573-17016969 FORWARD LENGTH=296	LOC_Os02g02920.1	protein|HVA22, putative, expressed	IMGA|Medtr1g024930.1	HVA22-like protein i chr1 8030768-8033991 E EGN_Mt100125 20111014	GO:0007165|signal transduction GO:0008150|biological_process GO:0009755|hormone-mediated signaling pathway	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_05184	A	A1S	Potri.002G023600	Potri.002G023600(AS)	POPTR_0002s02520	sp|Q8GSJ6|LQY1_ARATH	Protein disulfide-isomerase LQY1 OS=Arabidopsis thaliana GN=LQY1 PE=1 SV=1	AT1G75690.1	| Symbols: | DnaJ/Hsp40 cysteine-rich domain superfamily protein | chr1:28422273-28423170 REVERSE LENGTH=154	LOC_Os03g14040.1	protein|expressed protein	IMGA|Medtr1g024940.1	hypothetical protein chr1 8035773-8037534 E EGN_Mt100125 20111014	GO:0006098|pentose-phosphate shunt GO:0006364|rRNA processing GO:0009657|plastid organization GO:0010206|photosystem II repair GO:0010207|photosystem II assembly GO:0019684|photosynthesis, light reaction GO:0035304|regulation of protein dephosphorylation	GO:0003756|protein disulfide isomerase activity GO:0031072|heat shock protein binding GO:0051082|unfolded protein binding	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009570|chloroplast stroma
pt2_05185	A	A1S	Potri.002G023700	Potri.002G023700(AS)	POPTR_0002s02530	sp|O81769|DPH5_ARATH	Probable diphthine synthase OS=Arabidopsis thaliana GN=At4g31790 PE=2 SV=1	AT4G31790.2	| Symbols: | Tetrapyrrole (Corrin/Porphyrin) Methylases | chr4:15377479-15378530 FORWARD LENGTH=277	LOC_Os03g23970.2	protein|diphthine synthase, putative, expressed	NA	NA	GO:0008152|metabolic process GO:0009220|pyrimidine ribonucleotide biosynthetic process GO:0017183|peptidyl-diphthamide biosynthetic process from peptidyl-histidine	GO:0004164|diphthine synthase activity GO:0008168|methyltransferase activity	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_05186	A	A1S	Potri.002G023800	Potri.002G023800(AS)	POPTR_0002s02540	NA	NA	AT2G24960.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr2:10617263-10620034 FORWARD LENGTH=774	NA	NA	IMGA|Medtr1g024950.1	hypothetical protein chr1 8039728-8038359 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_05187	B	B1S	Potri.002G023900	Potri.002G023900(BS)	POPTR_0002s02550	sp|Q69SG5|GUN24_ORYSJ	Endoglucanase 24 OS=Oryza sativa subsp. japonica GN=Os09g0533900 PE=2 SV=1	AT1G19940.1	| Symbols: AtGH9B5, GH9B5 | glycosyl hydrolase 9B5 | chr1:6918323-6920268 REVERSE LENGTH=515	LOC_Os09g36350.1	protein|endoglucanase, putative, expressed	IMGA|Medtr5g085730.1	Endoglucanase chr5 36028973-36032829 E EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0005576|extracellular region
pt2_05188	A	A1S	Potri.002G024000	Potri.002G024000(AS)	POPTR_0002s02560	sp|B9F166|LOGL2_ORYSJ	Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL2 OS=Oryza sativa subsp. japonica GN=LOGL2 PE=3 SV=1	AT2G37210.1	| Symbols: | lysine decarboxylase family protein | chr2:15624253-15626834 REVERSE LENGTH=215	LOC_Os02g41770.1	protein|uncharacterized protein PA4923, putative, expressed	NA	NA	GO:0006826|iron ion transport GO:0008150|biological_process GO:0008152|metabolic process GO:0009733|response to auxin stimulus GO:0009741|response to brassinosteroid stimulus GO:0010106|cellular response to iron ion starvation GO:0010167|response to nitrate GO:0015706|nitrate transport	GO:0003674|molecular_function GO:0016831|carboxy-lyase activity	GO:0005634|nucleus GO:0005829|cytosol
pt2_05189	A	A2S	Potri.002G024000	Potri.002G024000(AS) Potri.005G237600(DS)	POPTR_0002s02560	sp|B9F166|LOGL2_ORYSJ	Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL2 OS=Oryza sativa subsp. japonica GN=LOGL2 PE=3 SV=1	AT2G37210.1	| Symbols: | lysine decarboxylase family protein | chr2:15624253-15626834 REVERSE LENGTH=215	LOC_Os02g41770.1	protein|uncharacterized protein PA4923, putative, expressed	NA	NA	GO:0006826|iron ion transport GO:0008150|biological_process GO:0008152|metabolic process GO:0009733|response to auxin stimulus GO:0009741|response to brassinosteroid stimulus GO:0010106|cellular response to iron ion starvation GO:0010167|response to nitrate GO:0015706|nitrate transport	GO:0003674|molecular_function GO:0016831|carboxy-lyase activity	GO:0005634|nucleus GO:0005829|cytosol
pt2_05190	A	A1S	Potri.002G024000	Potri.002G024000(AS)	POPTR_0002s02560	sp|B9F166|LOGL2_ORYSJ	Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL2 OS=Oryza sativa subsp. japonica GN=LOGL2 PE=3 SV=1	AT2G37210.1	| Symbols: | lysine decarboxylase family protein | chr2:15624253-15626834 REVERSE LENGTH=215	LOC_Os02g41770.1	protein|uncharacterized protein PA4923, putative, expressed	NA	NA	GO:0006826|iron ion transport GO:0008150|biological_process GO:0008152|metabolic process GO:0009733|response to auxin stimulus GO:0009741|response to brassinosteroid stimulus GO:0010106|cellular response to iron ion starvation GO:0010167|response to nitrate GO:0015706|nitrate transport	GO:0003674|molecular_function GO:0016831|carboxy-lyase activity	GO:0005634|nucleus GO:0005829|cytosol
pt2_05191	A	A1S	Potri.002G024100	Potri.002G024100(AS)	POPTR_0002s02570	sp|Q9FQ03|XRN3_ARATH	5'-3' exoribonuclease 3 OS=Arabidopsis thaliana GN=XRN3 PE=2 SV=1	AT1G75660.1	| Symbols: XRN3, AtXRN3 | 5'-3' exoribonuclease 3 | chr1:28408289-28414825 FORWARD LENGTH=1020	LOC_Os01g65220.1	protein|XRN 5'-3' exonuclease N-terminus domain containing protein, expressed	IMGA|contig_238358_1.1	5'-3' exoribonuclease contig_238358 114-819 H PREDN 20111014	GO:0006139|nucleobase-containing compound metabolic process GO:0006310|DNA recombination GO:0006635|fatty acid beta-oxidation GO:0007062|sister chromatid cohesion GO:0007126|meiosis GO:0007131|reciprocal meiotic recombination GO:0009887|organ morphogenesis GO:0009888|tissue development GO:0010332|response to gamma radiation GO:0010587|miRNA catabolic process GO:0010638|positive regulation of organelle organization GO:0016558|protein import into peroxisome matrix GO:0031048|chromatin silencing by small RNA GO:0032204|regulation of telomere maintenance GO:0033044|regulation of chromosome organization GO:0042138|meiotic DNA double-strand break formation GO:0043247|telomere maintenance in response to DNA damage GO:0045132|meiotic chromosome segregation	GO:0003676|nucleic acid binding GO:0004527|exonuclease activity GO:0004534|5'-3' exoribonuclease activity GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_05192	A	A1S	Potri.002G024100	Potri.002G024100(AS)	POPTR_0002s02570	sp|Q9FQ03|XRN3_ARATH	5'-3' exoribonuclease 3 OS=Arabidopsis thaliana GN=XRN3 PE=2 SV=1	AT1G75660.1	| Symbols: XRN3, AtXRN3 | 5'-3' exoribonuclease 3 | chr1:28408289-28414825 FORWARD LENGTH=1020	LOC_Os01g65220.1	protein|XRN 5'-3' exonuclease N-terminus domain containing protein, expressed	IMGA|contig_238358_1.1	5'-3' exoribonuclease contig_238358 114-819 H PREDN 20111014	GO:0006139|nucleobase-containing compound metabolic process GO:0006310|DNA recombination GO:0006635|fatty acid beta-oxidation GO:0007062|sister chromatid cohesion GO:0007126|meiosis GO:0007131|reciprocal meiotic recombination GO:0009887|organ morphogenesis GO:0009888|tissue development GO:0010332|response to gamma radiation GO:0010587|miRNA catabolic process GO:0010638|positive regulation of organelle organization GO:0016558|protein import into peroxisome matrix GO:0031048|chromatin silencing by small RNA GO:0032204|regulation of telomere maintenance GO:0033044|regulation of chromosome organization GO:0042138|meiotic DNA double-strand break formation GO:0043247|telomere maintenance in response to DNA damage GO:0045132|meiotic chromosome segregation	GO:0003676|nucleic acid binding GO:0004527|exonuclease activity GO:0004534|5'-3' exoribonuclease activity GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_05193	A	A1S	Potri.002G024200	Potri.002G024200(AS)	POPTR_0002s02580	sp|Q43870|APS2_ARATH	ATP sulfurylase 2 OS=Arabidopsis thaliana GN=APS2 PE=1 SV=1	AT1G19920.1	| Symbols: APS2, ASA1 | Pseudouridine synthase/archaeosine transglycosylase-like family protein | chr1:6914835-6916657 REVERSE LENGTH=476	LOC_Os04g02050.1	protein|bifunctional 3-phosphoadenosine 5-phosphosulfate synthetase, putative, expressed	NA	NA	GO:0000103|sulfate assimilation GO:0009970|cellular response to sulfate starvation	GO:0004781|sulfate adenylyltransferase (ATP) activity	GO:0005829|cytosol GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_05194	A	A1S	Potri.002G024300	Potri.002G024300(AS)	POPTR_0002s02590	sp|P32295|ARG7_VIGRR	Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata GN=ARG7 PE=2 SV=1	AT1G75580.1	| Symbols: | SAUR-like auxin-responsive protein family | chr1:28377530-28377856 FORWARD LENGTH=108	LOC_Os02g24700.1	protein|OsSAUR8 - Auxin-responsive SAUR gene family member, expressed	IMGA|Medtr5g021820.1	Auxin-induced protein 6B chr5 8253943-8253169 F EGN_Mt100125 20111014	GO:0009733|response to auxin stimulus	GO:0005516|calmodulin binding	GO:0005575|cellular_component
pt2_05195	A	A1S	Potri.002G024400	Potri.002G024400(AS)	POPTR_0002s02600	sp|Q0WSY2|FPP4_ARATH	Filament-like plant protein 4 OS=Arabidopsis thaliana GN=FPP4 PE=2 SV=1	AT1G19835.2	| Symbols: | Plant protein of unknown function (DUF869) | chr1:6856212-6859513 REVERSE LENGTH=982	LOC_Os03g14250.1	protein|plant protein of unknown function DUF869 domain containing protein, expressed	IMGA|Medtr5g021810.1	Filament-like plant protein chr5 8238844-8242977 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005737|cytoplasm GO:0005886|plasma membrane
pt2_05196	A	A1S	Potri.002G024500	Potri.002G024500(AS)	POPTR_0002s02610	sp|P32295|ARG7_VIGRR	Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata GN=ARG7 PE=2 SV=1	AT1G75590.1	| Symbols: | SAUR-like auxin-responsive protein family | chr1:28383250-28383714 REVERSE LENGTH=154	LOC_Os04g56680.1	protein|OsSAUR22 - Auxin-responsive SAUR gene family member, expressed	IMGA|Medtr1g061570.1	Auxin-induced protein 6B chr1 15693168-15692791 H EGN_Mt100125 20111014	GO:0009733|response to auxin stimulus	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_05197	A	A2S	Potri.002G024600	Potri.002G024600(AS) Potri.T163300(AS)	POPTR_0002s02620	NA	NA	AT1G75670.2	| Symbols: | DNA-directed RNA polymerases | chr1:28415378-28416505 REVERSE LENGTH=196	LOC_Os06g07190.2	protein|RNA polymerase Rpb7, N-terminal domain containing protein, expressed	NA	NA	GO:0006351|transcription, DNA-dependent GO:0006626|protein targeting to mitochondrion	GO:0003899|DNA-directed RNA polymerase activity	GO:0005634|nucleus
pt2_05198	A	A2S	Potri.002G024700	Potri.002G024700(AS) Potri.005G236700(DS)	POPTR_0002s02630	sp|P93024|ARFE_ARATH	Auxin response factor 5 OS=Arabidopsis thaliana GN=ARF5 PE=1 SV=3	AT1G19850.1	| Symbols: MP, ARF5, IAA24 | Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related | chr1:6887353-6891182 FORWARD LENGTH=902	LOC_Os04g56850.2	protein|auxin response factor, putative, expressed	IMGA|Medtr5g076270.1	Auxin response factor chr5 31499972-31490689 E EGN_Mt100125 20111014	GO:0006346|methylation-dependent chromatin silencing GO:0006355|regulation of transcription, DNA-dependent GO:0007155|cell adhesion GO:0009725|response to hormone stimulus GO:0009733|response to auxin stimulus GO:0009741|response to brassinosteroid stimulus GO:0009790|embryo development GO:0009855|determination of bilateral symmetry GO:0009886|post-embryonic morphogenesis GO:0009887|organ morphogenesis GO:0009908|flower development GO:0009909|regulation of flower development GO:0009942|longitudinal axis specification GO:0009944|polarity specification of adaxial/abaxial axis GO:0009965|leaf morphogenesis GO:0010014|meristem initiation GO:0010051|xylem and phloem pattern formation GO:0010073|meristem maintenance GO:0010090|trichome morphogenesis GO:0010305|leaf vascular tissue pattern formation GO:0016246|RNA interference GO:0031048|chromatin silencing by small RNA GO:0045010|actin nucleation GO:0048364|root development GO:0048439|flower morphogenesis GO:0048481|ovule development GO:0048507|meristem development GO:0048519|negative regulation of biological process GO:0048527|lateral root development GO:0048765|root hair cell differentiation GO:0051567|histone H3-K9 methylation GO:0071555|cell wall organization	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0042802|identical protein binding GO:0044212|transcription regulatory region DNA binding	GO:0005634|nucleus GO:0016020|membrane
pt2_05199	A	A1S	Potri.002G024800	Potri.002G024800(AS)	POPTR_0002s02640	NA	NA	AT3G27230.1	| Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr3:10054224-10055456 FORWARD LENGTH=410	LOC_Os06g04680.1	protein|expressed protein	IMGA|contig_114282_1.1	Unknown protein contig_114282 2027-555 H PREDN 20111014	NA	GO:0008168|methyltransferase activity	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_05200	A	A2S	Potri.002G024900	Potri.002G024900(AS) Potri.005G236500(DS)	POPTR_0002s02650	NA	NA	AT5G15320.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01130.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:4977647-4978658 FORWARD LENGTH=53	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_05201	A	A1S	Potri.002G025000	Potri.002G025000(AS)	POPTR_0002s02660	NA	NA	AT5G39590.1	| Symbols: | TLD-domain containing nucleolar protein | chr5:15851483-15853768 FORWARD LENGTH=542	LOC_Os04g56790.1	protein|TLD family protein, putative, expressed	NA	NA	GO:0000902|cell morphogenesis GO:0006499|N-terminal protein myristoylation GO:0016049|cell growth GO:0048193|Golgi vesicle transport	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_05202	A	A1S	Potri.002G025100	Potri.002G025100(AS)	POPTR_0002s02670	sp|Q56XU4|C3H6_ARATH	Zinc finger CCCH domain-containing protein 6 OS=Arabidopsis thaliana GN=At1g19860 PE=2 SV=1	AT1G19860.1	| Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family protein | chr1:6891654-6894400 REVERSE LENGTH=413	LOC_Os04g56750.1	protein|zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003676|nucleic acid binding GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_05203	A	A1S	Potri.002G025200	Potri.002G025200(AS)	POPTR_0002s02680	sp|Q9FXI5|IQD32_ARATH	Protein IQ-DOMAIN 32 OS=Arabidopsis thaliana GN=IQD32 PE=1 SV=3	AT1G19870.1	| Symbols: iqd32 | IQ-domain 32 | chr1:6895400-6898539 REVERSE LENGTH=794	LOC_Os04g56740.1	protein|IQ calmodulin-binding motif family protein, putative, expressed	IMGA|Medtr5g038620.1	IQ domain-containing protein chr5 16546352-16552166 E EGN_Mt100125 20111014	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0009086|methionine biosynthetic process GO:0009737|response to abscisic acid stimulus GO:0010048|vernalization response	GO:0005516|calmodulin binding	GO:0005634|nucleus GO:0005829|cytosol GO:0005886|plasma membrane GO:0009941|chloroplast envelope
pt2_05204	A	A3S	Potri.002G025300	Potri.002G025300(AS) Potri.002G026100(BS) Potri.002G025400(BS)	POPTR_0002s02690	sp|O65782|C83B1_ARATH	Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1	AT4G31500.1	| Symbols: CYP83B1, SUR2, RNT1, RED1, ATR4 | cytochrome P450, family 83, subfamily B, polypeptide 1 | chr4:15273677-15275271 REVERSE LENGTH=499	LOC_Os03g63310.1	protein|cytochrome P450 71E1, putative, expressed	IMGA|Medtr5g072980.1	Cytochrome P450 71B37 chr5 30054020-30052386 F EGN_Mt100125 20111014	GO:0000096|sulfur amino acid metabolic process GO:0000162|tryptophan biosynthetic process GO:0006520|cellular amino acid metabolic process GO:0006546|glycine catabolic process GO:0006569|tryptophan catabolic process GO:0006636|unsaturated fatty acid biosynthetic process GO:0006733|oxidoreduction coenzyme metabolic process GO:0006766|vitamin metabolic process GO:0008652|cellular amino acid biosynthetic process GO:0009072|aromatic amino acid family metabolic process GO:0009106|lipoate metabolic process GO:0009108|coenzyme biosynthetic process GO:0009117|nucleotide metabolic process GO:0009641|shade avoidance GO:0009682|induced systemic resistance GO:0009684|indoleacetic acid biosynthetic process GO:0009695|jasmonic acid biosynthetic process GO:0009759|indole glucosinolate biosynthetic process GO:0010114|response to red light GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019748|secondary metabolic process GO:0019761|glucosinolate biosynthetic process GO:0042742|defense response to bacterium GO:0044272|sulfur compound biosynthetic process GO:0048830|adventitious root development GO:0052544|defense response by callose deposition in cell wall GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0016709|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005739|mitochondrion GO:0005783|endoplasmic reticulum GO:0005886|plasma membrane GO:0016020|membrane
pt2_05205	B	B4S	Potri.002G025300	Potri.002G025300(BS) Potri.002G026100(BS) Potri.002G025400(BS) Potri.002G026300(DS)	POPTR_0002s02700	sp|O65782|C83B1_ARATH	Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1	AT4G31500.1	| Symbols: CYP83B1, SUR2, RNT1, RED1, ATR4 | cytochrome P450, family 83, subfamily B, polypeptide 1 | chr4:15273677-15275271 REVERSE LENGTH=499	LOC_Os03g63310.1	protein|cytochrome P450 71E1, putative, expressed	IMGA|Medtr5g072980.1	Cytochrome P450 71B37 chr5 30054020-30052386 F EGN_Mt100125 20111014	GO:0000096|sulfur amino acid metabolic process GO:0000162|tryptophan biosynthetic process GO:0006520|cellular amino acid metabolic process GO:0006546|glycine catabolic process GO:0006569|tryptophan catabolic process GO:0006636|unsaturated fatty acid biosynthetic process GO:0006733|oxidoreduction coenzyme metabolic process GO:0006766|vitamin metabolic process GO:0008652|cellular amino acid biosynthetic process GO:0009072|aromatic amino acid family metabolic process GO:0009106|lipoate metabolic process GO:0009108|coenzyme biosynthetic process GO:0009117|nucleotide metabolic process GO:0009641|shade avoidance GO:0009682|induced systemic resistance GO:0009684|indoleacetic acid biosynthetic process GO:0009695|jasmonic acid biosynthetic process GO:0009759|indole glucosinolate biosynthetic process GO:0010114|response to red light GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019748|secondary metabolic process GO:0019761|glucosinolate biosynthetic process GO:0042742|defense response to bacterium GO:0044272|sulfur compound biosynthetic process GO:0048830|adventitious root development GO:0052544|defense response by callose deposition in cell wall GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0016709|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005739|mitochondrion GO:0005783|endoplasmic reticulum GO:0005886|plasma membrane GO:0016020|membrane
pt2_05206	G	G1	NA	NA	POPTR_0002s02710	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05207	A	A4S	Potri.002G026000	Potri.002G026000(AS) Potri.002G025500(BS) Potri.002G025700(BS) Potri.002G026300(DS)	POPTR_0002s02720	sp|Q6XQ14|C71E7_MANES	2-methylbutanal oxime monooxygenase OS=Manihot esculenta GN=CYP71E7 PE=1 SV=1	AT3G26830.1	| Symbols: PAD3, CYP71B15 | Cytochrome P450 superfamily protein | chr3:9887990-9889560 FORWARD LENGTH=490	LOC_Os09g36070.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g073020.1	Cytochrome P450 71B35 chr5 30073607-30071218 F EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	NA
pt2_05208	A	A3S	Potri.002G025500	Potri.002G025500(AS) Potri.002G025800(BS) Potri.002G026300(BS)	POPTR_0002s02730	sp|O65782|C83B1_ARATH	Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1	AT4G31500.1	| Symbols: CYP83B1, SUR2, RNT1, RED1, ATR4 | cytochrome P450, family 83, subfamily B, polypeptide 1 | chr4:15273677-15275271 REVERSE LENGTH=499	LOC_Os12g32850.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g073020.1	Cytochrome P450 71B35 chr5 30073607-30071218 F EGN_Mt100125 20111014	GO:0000096|sulfur amino acid metabolic process GO:0000162|tryptophan biosynthetic process GO:0006520|cellular amino acid metabolic process GO:0006546|glycine catabolic process GO:0006569|tryptophan catabolic process GO:0006636|unsaturated fatty acid biosynthetic process GO:0006733|oxidoreduction coenzyme metabolic process GO:0006766|vitamin metabolic process GO:0008652|cellular amino acid biosynthetic process GO:0009072|aromatic amino acid family metabolic process GO:0009106|lipoate metabolic process GO:0009108|coenzyme biosynthetic process GO:0009117|nucleotide metabolic process GO:0009641|shade avoidance GO:0009682|induced systemic resistance GO:0009684|indoleacetic acid biosynthetic process GO:0009695|jasmonic acid biosynthetic process GO:0009759|indole glucosinolate biosynthetic process GO:0010114|response to red light GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019748|secondary metabolic process GO:0019761|glucosinolate biosynthetic process GO:0042742|defense response to bacterium GO:0044272|sulfur compound biosynthetic process GO:0048830|adventitious root development GO:0052544|defense response by callose deposition in cell wall GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0016709|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005739|mitochondrion GO:0005783|endoplasmic reticulum GO:0005886|plasma membrane GO:0016020|membrane
pt2_05209	C	C2S	Potri.002G025600	Potri.002G025600(CS) Potri.002G026400(CS)	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0008536|Ran GTPase binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05210	A	A1S	Potri.002G025900	Potri.002G025900(AS)	POPTR_0002s02760	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05211	A	A3S	Potri.002G025300	Potri.002G025300(AS) Potri.002G026100(AS) Potri.002G025400(BS)	POPTR_0002s02770	sp|O65782|C83B1_ARATH	Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1	AT4G31500.1	| Symbols: CYP83B1, SUR2, RNT1, RED1, ATR4 | cytochrome P450, family 83, subfamily B, polypeptide 1 | chr4:15273677-15275271 REVERSE LENGTH=499	LOC_Os03g63310.1	protein|cytochrome P450 71E1, putative, expressed	IMGA|Medtr5g072980.1	Cytochrome P450 71B37 chr5 30054020-30052386 F EGN_Mt100125 20111014	GO:0000096|sulfur amino acid metabolic process GO:0000162|tryptophan biosynthetic process GO:0006520|cellular amino acid metabolic process GO:0006546|glycine catabolic process GO:0006569|tryptophan catabolic process GO:0006636|unsaturated fatty acid biosynthetic process GO:0006733|oxidoreduction coenzyme metabolic process GO:0006766|vitamin metabolic process GO:0008652|cellular amino acid biosynthetic process GO:0009072|aromatic amino acid family metabolic process GO:0009106|lipoate metabolic process GO:0009108|coenzyme biosynthetic process GO:0009117|nucleotide metabolic process GO:0009641|shade avoidance GO:0009682|induced systemic resistance GO:0009684|indoleacetic acid biosynthetic process GO:0009695|jasmonic acid biosynthetic process GO:0009759|indole glucosinolate biosynthetic process GO:0010114|response to red light GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019748|secondary metabolic process GO:0019761|glucosinolate biosynthetic process GO:0042742|defense response to bacterium GO:0044272|sulfur compound biosynthetic process GO:0048830|adventitious root development GO:0052544|defense response by callose deposition in cell wall GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0016709|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005739|mitochondrion GO:0005783|endoplasmic reticulum GO:0005886|plasma membrane GO:0016020|membrane
pt2_05212	A	A1S	Potri.002G026200	Potri.002G026200(AS)	POPTR_0002s02780	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05213	A	A3S	Potri.002G026300	Potri.002G026300(AS) Potri.002G025500(BS) Potri.002G025800(BS)	POPTR_0002s02790	sp|O65782|C83B1_ARATH	Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1	AT4G31500.1	| Symbols: CYP83B1, SUR2, RNT1, RED1, ATR4 | cytochrome P450, family 83, subfamily B, polypeptide 1 | chr4:15273677-15275271 REVERSE LENGTH=499	LOC_Os12g32850.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g073020.1	Cytochrome P450 71B35 chr5 30073607-30071218 F EGN_Mt100125 20111014	GO:0000096|sulfur amino acid metabolic process GO:0000162|tryptophan biosynthetic process GO:0006520|cellular amino acid metabolic process GO:0006546|glycine catabolic process GO:0006569|tryptophan catabolic process GO:0006636|unsaturated fatty acid biosynthetic process GO:0006733|oxidoreduction coenzyme metabolic process GO:0006766|vitamin metabolic process GO:0008652|cellular amino acid biosynthetic process GO:0009072|aromatic amino acid family metabolic process GO:0009106|lipoate metabolic process GO:0009108|coenzyme biosynthetic process GO:0009117|nucleotide metabolic process GO:0009641|shade avoidance GO:0009682|induced systemic resistance GO:0009684|indoleacetic acid biosynthetic process GO:0009695|jasmonic acid biosynthetic process GO:0009759|indole glucosinolate biosynthetic process GO:0010114|response to red light GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019748|secondary metabolic process GO:0019761|glucosinolate biosynthetic process GO:0042742|defense response to bacterium GO:0044272|sulfur compound biosynthetic process GO:0048830|adventitious root development GO:0052544|defense response by callose deposition in cell wall GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0016709|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005739|mitochondrion GO:0005783|endoplasmic reticulum GO:0005886|plasma membrane GO:0016020|membrane
pt2_05214	B	B7S	Potri.002G025500	Potri.002G025500(BS) Potri.002G025800(BS) Potri.002G026500(BS) Potri.002G026300(BS) Potri.002G025300(DS) Potri.002G026100(DS) Potri.002G025400(DS)	POPTR_0002s02800	sp|O65782|C83B1_ARATH	Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1	AT4G31500.1	| Symbols: CYP83B1, SUR2, RNT1, RED1, ATR4 | cytochrome P450, family 83, subfamily B, polypeptide 1 | chr4:15273677-15275271 REVERSE LENGTH=499	LOC_Os12g32850.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g073020.1	Cytochrome P450 71B35 chr5 30073607-30071218 F EGN_Mt100125 20111014	GO:0000096|sulfur amino acid metabolic process GO:0000162|tryptophan biosynthetic process GO:0006520|cellular amino acid metabolic process GO:0006546|glycine catabolic process GO:0006569|tryptophan catabolic process GO:0006636|unsaturated fatty acid biosynthetic process GO:0006733|oxidoreduction coenzyme metabolic process GO:0006766|vitamin metabolic process GO:0008652|cellular amino acid biosynthetic process GO:0009072|aromatic amino acid family metabolic process GO:0009106|lipoate metabolic process GO:0009108|coenzyme biosynthetic process GO:0009117|nucleotide metabolic process GO:0009641|shade avoidance GO:0009682|induced systemic resistance GO:0009684|indoleacetic acid biosynthetic process GO:0009695|jasmonic acid biosynthetic process GO:0009759|indole glucosinolate biosynthetic process GO:0010114|response to red light GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019748|secondary metabolic process GO:0019761|glucosinolate biosynthetic process GO:0042742|defense response to bacterium GO:0044272|sulfur compound biosynthetic process GO:0048830|adventitious root development GO:0052544|defense response by callose deposition in cell wall GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0016709|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005739|mitochondrion GO:0005783|endoplasmic reticulum GO:0005886|plasma membrane GO:0016020|membrane
pt2_05215	A	A2S	Potri.002G025800	Potri.002G025800(AS) Potri.002G026500(AS)	POPTR_0002s02800	sp|O65782|C83B1_ARATH	Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1	AT4G31500.1	| Symbols: CYP83B1, SUR2, RNT1, RED1, ATR4 | cytochrome P450, family 83, subfamily B, polypeptide 1 | chr4:15273677-15275271 REVERSE LENGTH=499	LOC_Os12g16720.1	protein|cytochrome P450 71A1, putative, expressed	IMGA|Medtr5g073020.1	Cytochrome P450 71B35 chr5 30073607-30071218 F EGN_Mt100125 20111014	GO:0000096|sulfur amino acid metabolic process GO:0000162|tryptophan biosynthetic process GO:0006520|cellular amino acid metabolic process GO:0006546|glycine catabolic process GO:0006569|tryptophan catabolic process GO:0006636|unsaturated fatty acid biosynthetic process GO:0006733|oxidoreduction coenzyme metabolic process GO:0006766|vitamin metabolic process GO:0008652|cellular amino acid biosynthetic process GO:0009072|aromatic amino acid family metabolic process GO:0009106|lipoate metabolic process GO:0009108|coenzyme biosynthetic process GO:0009117|nucleotide metabolic process GO:0009641|shade avoidance GO:0009682|induced systemic resistance GO:0009684|indoleacetic acid biosynthetic process GO:0009695|jasmonic acid biosynthetic process GO:0009759|indole glucosinolate biosynthetic process GO:0010114|response to red light GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019748|secondary metabolic process GO:0019761|glucosinolate biosynthetic process GO:0042742|defense response to bacterium GO:0044272|sulfur compound biosynthetic process GO:0048830|adventitious root development GO:0052544|defense response by callose deposition in cell wall GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0016709|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005739|mitochondrion GO:0005783|endoplasmic reticulum GO:0005886|plasma membrane GO:0016020|membrane
pt2_05216	A	A1S	Potri.002G026600	Potri.002G026600(AS)	POPTR_0002s02810	sp|Q9P258|RCC2_HUMAN	Protein RCC2 OS=Homo sapiens GN=RCC2 PE=1 SV=2	AT1G19880.1	| Symbols: | Regulator of chromosome condensation (RCC1) family protein | chr1:6900648-6903818 REVERSE LENGTH=538	LOC_Os04g56720.1	protein|RCC2, putative, expressed	IMGA|Medtr1g042800.1	Serine/threonine protein kinase Nek9 chr1 12287804-12293914 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0008536|Ran GTPase binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05217	A	A1S	Potri.002G026700	Potri.002G026700(AS)	POPTR_0002s02820	sp|Q8L999|BPC6_ARATH	Protein BASIC PENTACYSTEINE6 OS=Arabidopsis thaliana GN=BPC6 PE=1 SV=1	AT5G42520.1	| Symbols: BPC6, BBR/BPC6, ATBPC6 | basic pentacysteine 6 | chr5:17001287-17002466 FORWARD LENGTH=342	LOC_Os06g04010.2	protein|GAGA-binding protein, putative, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0009723|response to ethylene stimulus GO:0050793|regulation of developmental process	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0042803|protein homodimerization activity	GO:0005634|nucleus GO:0005730|nucleolus GO:0005737|cytoplasm
pt2_05218	A	A1S	Potri.002G026800	Potri.002G026800(AS)	POPTR_0002s02830	sp|Q71H73|H33_VITVI	Histone H3.3 OS=Vitis vinifera PE=2 SV=3	AT5G10980.1	| Symbols: | Histone superfamily protein | chr5:3472591-3473349 REVERSE LENGTH=136	LOC_Os06g04030.1	protein|histone H3, putative, expressed	IMGA|Medtr1g023630.1	Histone H3 chr1 7336424-7335549 F EGN_Mt100125 20111014	GO:0006334|nucleosome assembly	GO:0003677|DNA binding	GO:0000786|nucleosome GO:0005634|nucleus
pt2_05219	A	A1S	Potri.002G026900	Potri.002G026900(AS)	POPTR_0002s02840	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05220	A	A1S	Potri.002G027000	Potri.002G027000(AS)	POPTR_0002s02850	sp|I1S2N3|GAOA_GIBZE	Galactose oxidase OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=GAOA PE=3 SV=1	AT1G75620.1	| Symbols: | glyoxal oxidase-related protein | chr1:28394951-28396594 REVERSE LENGTH=547	LOC_Os03g15320.1	protein|glyoxal oxidase-related, putative, expressed	IMGA|Medtr1g023570.1	Galactose oxidase chr1 7311005-7313086 E EGN_Mt100125 20111014	GO:0008150|biological_process GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_05221	A	A2S	Potri.002G027100	Potri.002G027100(AS) Potri.005G235400(DS)	POPTR_0002s02860	sp|Q6Z690|LDL1_ORYSJ	Lysine-specific histone demethylase 1 homolog 1 OS=Oryza sativa subsp. japonica GN=Os02g0755200 PE=2 SV=1	AT4G16310.1	| Symbols: LDL3 | LSD1-like 3 | chr4:9218636-9224764 FORWARD LENGTH=1628	LOC_Os10g38850.1	protein|amine oxidase, putative, expressed	IMGA|Medtr1g023510.1	Lysine-specific histone demethylase-like protein chr1 7288358-7279269 H EGN_Mt100125 20111014	GO:0009851|auxin biosynthetic process GO:0010229|inflorescence development GO:0048825|cotyledon development GO:0055114|oxidation-reduction process	GO:0008131|primary amine oxidase activity GO:0016491|oxidoreductase activity	GO:0005739|mitochondrion
pt2_05222	A	A1S	Potri.002G027200	Potri.002G027200(AS)	POPTR_0002s02870	sp|P59228|VATL2_ARATH	V-type proton ATPase 16 kDa proteolipid subunit c2 OS=Arabidopsis thaliana GN=VHA-C2 PE=2 SV=1	AT1G19910.1	| Symbols: AVA-P2, AVA-2PE, ATVHA-C2 | ATPase, F0/V0 complex, subunit C protein | chr1:6913317-6914322 FORWARD LENGTH=165	LOC_Os02g34510.1	protein|vacuolar ATP synthase, putative, expressed	IMGA|Medtr5g021690.1	V-type proton ATPase 16 kDa proteolipid subunit c4 chr5 8167333-8164681 F EGN_Mt100125 20111014	GO:0015991|ATP hydrolysis coupled proton transport	GO:0015078|hydrogen ion transmembrane transporter activity GO:0016887|ATPase activity GO:0046961|proton-transporting ATPase activity, rotational mechanism	GO:0000220|vacuolar proton-transporting V-type ATPase, V0 domain GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005886|plasma membrane GO:0009507|chloroplast GO:0033177|proton-transporting two-sector ATPase complex, proton-transporting domain GO:0033179|proton-transporting V-type ATPase, V0 domain
pt2_05223	A	A1S	Potri.002G027300	Potri.002G027300(AS)	POPTR_0002s02880	sp|Q8VD66|ABHD4_MOUSE	Abhydrolase domain-containing protein 4 OS=Mus musculus GN=Abhd4 PE=2 SV=1	AT4G24160.1	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr4:12539871-12542210 FORWARD LENGTH=418	LOC_Os09g34860.1	protein|hydrolase, alpha/beta fold family domain containing protein, expressed	NA	NA	GO:0009407|toxin catabolic process GO:0010200|response to chitin GO:0010583|response to cyclopentenone GO:0052542|defense response by callose deposition GO:0055088|lipid homeostasis GO:0055089|fatty acid homeostasis GO:0055091|phospholipid homeostasis GO:0070328|triglyceride homeostasis	GO:0004623|phospholipase A2 activity GO:0016298|lipase activity GO:0016787|hydrolase activity GO:0042171|lysophosphatidic acid acyltransferase activity	NA
pt2_05224	A	A2S	Potri.002G027400	Potri.002G027400(AS) Potri.005G235100(DS)	POPTR_0002s02890	sp|C0LGS2|Y4361_ARATH	Probable LRR receptor-like serine/threonine-protein kinase At4g36180 OS=Arabidopsis thaliana GN=At4g36180 PE=1 SV=1	AT1G75640.1	| Symbols: | Leucine-rich receptor-like protein kinase family protein | chr1:28403600-28407022 REVERSE LENGTH=1140	LOC_Os04g48760.1	protein|leucine-rich repeat family protein, putative, expressed	IMGA|Medtr5g021670.1	Receptor-like protein kinase chr5 8154326-8157810 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_05225	A	A1S	Potri.002G027500	Potri.002G027500(AS)	POPTR_0002s02900	sp|Q9FIG9|ARC6_ARATH	Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic OS=Arabidopsis thaliana GN=ARC6 PE=1 SV=1	AT5G42480.1	| Symbols: ARC6 | Chaperone DnaJ-domain superfamily protein | chr5:16985295-16988332 FORWARD LENGTH=801	LOC_Os02g03000.2	protein|division protein, putative, expressed	NA	NA	GO:0006457|protein folding GO:0009658|chloroplast organization GO:0010020|chloroplast fission GO:0010207|photosystem II assembly	GO:0005515|protein binding GO:0043621|protein self-association	GO:0009507|chloroplast GO:0009536|plastid GO:0009706|chloroplast inner membrane GO:0009941|chloroplast envelope GO:0031357|integral to chloroplast inner membrane
pt2_05226	A	A1S	Potri.002G027600	Potri.002G027600(AS)	POPTR_0002s02910	sp|Q6S001|KIF11_DICDI	Kinesin-related protein 11 OS=Dictyostelium discoideum GN=kif11 PE=3 SV=1	AT2G21300.2	| Symbols: | ATP binding microtubule motor family protein | chr2:9114396-9118292 REVERSE LENGTH=862	LOC_Os04g45580.1	protein|kinesin motor domain containing protein, expressed	IMGA|Medtr5g021650.1	Kinesin-related protein chr5 8136149-8141619 E EGN_Mt100125 20111014	NA	GO:0003777|microtubule motor activity GO:0005524|ATP binding	GO:0005737|cytoplasm
pt2_05227	A	A1S	Potri.002G027700	Potri.002G027700(AS)	POPTR_0002s02920	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05228	A	A1S	Potri.002G027800	Potri.002G027800(AS)	POPTR_0002s02930	sp|Q9FRI5|PPR57_ARATH	Pentatricopeptide repeat-containing protein At1g25360 OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1	AT1G25360.1	| Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:8894428-8896800 FORWARD LENGTH=790	LOC_Os07g39910.1	protein|pentatricopeptide repeat domain containing protein, putative, expressed	IMGA|Medtr1g073300.1	Pentatricopeptide repeat-containing protein chr1 18648764-18651151 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_05229	A	A1S	Potri.002G027900	Potri.002G027900(AS)	POPTR_0002s02940	sp|O23052|Y1515_ARATH	Uncharacterized TPR repeat-containing protein At1g05150 OS=Arabidopsis thaliana GN=At1g05150 PE=1 SV=1	AT1G05150.1	| Symbols: | Calcium-binding tetratricopeptide family protein | chr1:1484280-1486706 REVERSE LENGTH=808	LOC_Os03g15740.1	protein|uncharacterized TPR repeat-containing protein, putative, expressed	NA	NA	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0007020|microtubule nucleation GO:0008150|biological_process GO:0009086|methionine biosynthetic process	GO:0005509|calcium ion binding GO:0016757|transferase activity, transferring glycosyl groups	GO:0005634|nucleus GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_05230	B	B1S	Potri.002G028000	Potri.002G028000(BS)	POPTR_0002s02950	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05231	A	A1S	Potri.002G028100	Potri.002G028100(AS)	POPTR_0002s02960	NA	NA	AT3G49990.1	| Symbols: | unknown protein; Has 1524 Blast hits to 1298 proteins in 225 species: Archae - 9; Bacteria - 84; Metazoa - 474; Fungi - 184; Plants - 98; Viruses - 17; Other Eukaryotes - 658 (source: NCBI BLink). | chr3:18532492-18534000 REVERSE LENGTH=502	LOC_Os03g25620.1	protein|LTV1, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05232	A	A1S	Potri.002G028200	Potri.002G028200(AS)	POPTR_0002s02970	sp|Q9LQZ7|STHX_ARATH	Probable salt tolerance-like protein At1g75540 OS=Arabidopsis thaliana GN=At1g75540 PE=1 SV=1	AT1G75540.1	| Symbols: STH2 | salt tolerance homolog2 | chr1:28366059-28367398 FORWARD LENGTH=331	LOC_Os04g45690.1	protein|B-box zinc finger family protein, putative, expressed	IMGA|Medtr1g023260.1	Zinc finger protein CONSTANS-like protein chr1 7171447-7172677 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009641|shade avoidance	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_05233	A	A1S	Potri.002G028300	Potri.002G028300(AS)	POPTR_0002s02980	sp|Q99L90|MCRS1_MOUSE	Microspherule protein 1 OS=Mus musculus GN=Mcrs1 PE=1 SV=1	AT3G54350.3	| Symbols: emb1967 | Forkhead-associated (FHA) domain-containing protein | chr3:20122298-20126031 REVERSE LENGTH=702	LOC_Os03g58640.1	protein|FHA domain containing protein, putative, expressed	NA	NA	GO:0006312|mitotic recombination GO:0006346|methylation-dependent chromatin silencing GO:0009560|embryo sac egg cell differentiation GO:0009630|gravitropism GO:0009793|embryo development ending in seed dormancy GO:0016246|RNA interference	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05234	A	A1S	Potri.002G028400	Potri.002G028400(AS)	POPTR_0002s02990	sp|P23706|DEFA_ANTMA	Floral homeotic protein DEFICIENS OS=Antirrhinum majus GN=DEFA PE=1 SV=1	AT3G54340.1	| Symbols: AP3, ATAP3 | K-box region and MADS-box transcription factor family protein | chr3:20119428-20121087 REVERSE LENGTH=232	LOC_Os06g49840.1	protein|OsMADS16 - MADS-box family gene with MIKCc type-box, expressed	IMGA|Medtr5g021270.1	MADS box transcription factor TM6 chr5 7943940-7945856 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009827|plant-type cell wall modification GO:0009860|pollen tube growth GO:0009886|post-embryonic morphogenesis GO:0009909|regulation of flower development GO:0010093|specification of floral organ identity GO:0048440|carpel development GO:0048441|petal development GO:0048443|stamen development GO:0048481|ovule development GO:0048507|meristem development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_05235	A	A2S	Potri.002G028500	Potri.002G028500(AS) Potri.005G234200(DS)	POPTR_0002s03000	NA	NA	AT1G75520.1	| Symbols: SRS5 | SHI-related sequence 5 | chr1:28351779-28353179 REVERSE LENGTH=346	LOC_Os06g49830.1	protein|SHI, putative, expressed	IMGA|Medtr5g021130.1	Short internode related sequence chr5 7844027-7846006 H EGN_Mt100125 20111014	GO:0007389|pattern specification process GO:0048438|floral whorl development GO:0048439|flower morphogenesis GO:0048467|gynoecium development	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05236	A	A2S	Potri.002G028600	Potri.002G028600(AS) Potri.002G028700(AA)	POPTR_0002s03010	sp|Q8AVM5|VPP1_XENLA	V-type proton ATPase 116 kDa subunit a isoform 1 OS=Xenopus laevis GN=atp6v0a1 PE=2 SV=1	AT2G21410.1	| Symbols: VHA-A2 | vacuolar proton ATPase A2 | chr2:9162703-9168141 FORWARD LENGTH=821	LOC_Os10g10500.1	protein|vacuolar ATP synthase 98 kDa subunit, putative, expressed	NA	NA	GO:0015986|ATP synthesis coupled proton transport GO:0031669|cellular response to nutrient levels GO:0032119|sequestering of zinc ion GO:0043181|vacuolar sequestering GO:0070072|vacuolar proton-transporting V-type ATPase complex assembly	GO:0009678|hydrogen-translocating pyrophosphatase activity GO:0016887|ATPase activity GO:0045735|nutrient reservoir activity	GO:0000325|plant-type vacuole GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0009507|chloroplast GO:0009705|plant-type vacuole membrane GO:0016020|membrane GO:0033177|proton-transporting two-sector ATPase complex, proton-transporting domain
pt2_05237	D	D2S	Potri.002G028700	Potri.002G028700(DS) Potri.002G028600(DA)	POPTR_0002s03020	sp|P25804|CYSP_PEA	Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1	AT4G39090.1	| Symbols: RD19, RD19A | Papain family cysteine protease | chr4:18215826-18217326 REVERSE LENGTH=368	LOC_Os02g27030.1	protein|cysteine proteinase 1 precursor, putative, expressed	IMGA|Medtr1g018840.3	Cysteine proteinase chr1 5706940-5702641 F EGN_Mt100125 20111014	GO:0006096|glycolysis GO:0006508|proteolysis GO:0006833|water transport GO:0006970|response to osmotic stress GO:0006972|hyperosmotic response GO:0007030|Golgi organization GO:0009266|response to temperature stimulus GO:0009269|response to desiccation GO:0009414|response to water deprivation GO:0009651|response to salt stress GO:0042742|defense response to bacterium GO:0046686|response to cadmium ion	GO:0004197|cysteine-type endopeptidase activity GO:0008234|cysteine-type peptidase activity	GO:0005576|extracellular region GO:0005634|nucleus GO:0005773|vacuole
pt2_05238	A	A2S	Potri.002G028800	Potri.002G028800(AS) Potri.005G233900(DS)	POPTR_0002s03030	sp|P68428|H32_WHEAT	Histone H3.2 OS=Triticum aestivum PE=1 SV=2	AT5G65360.1	| Symbols: | Histone superfamily protein | chr5:26120099-26120509 REVERSE LENGTH=136	LOC_Os11g05730.1	protein|histone H3, putative, expressed	IMGA|Medtr1g105310.1	Histone H3 chr1 31130267-31130862 F EGN_Mt100125 20111014	GO:0006334|nucleosome assembly	GO:0003677|DNA binding	GO:0000786|nucleosome GO:0005634|nucleus
pt2_05239	A	A1S	Potri.002G028900	Potri.002G028900(AS)	POPTR_0002s03040	sp|O94424|T2FB_SCHPO	Transcription initiation factor IIF subunit beta OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tfg2 PE=1 SV=1	AT1G75510.1	| Symbols: | Transcription initiation factor IIF, beta subunit | chr1:28347254-28348629 REVERSE LENGTH=261	LOC_Os01g56550.2	protein|transcription initiation factor IIF beta subunit, putative, expressed	NA	NA	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0006366|transcription from RNA polymerase II promoter GO:0006367|transcription initiation from RNA polymerase II promoter	GO:0003824|catalytic activity GO:0005524|ATP binding GO:0008026|ATP-dependent helicase activity	GO:0005634|nucleus GO:0005674|transcription factor TFIIF complex GO:0005739|mitochondrion
pt2_05240	A	A1S	Potri.002G029000	Potri.002G029000(AS)	POPTR_0002s03050	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05241	A	A1S	Potri.002G029100	Potri.002G029100(AS)	POPTR_0002s03060	sp|Q6J163|5NG4_PINTA	Auxin-induced protein 5NG4 OS=Pinus taeda PE=2 SV=1	AT1G75500.2	| Symbols: WAT1 | Walls Are Thin 1 | chr1:28338282-28340091 REVERSE LENGTH=389	LOC_Os08g44750.1	protein|auxin-induced protein 5NG4, putative, expressed	IMGA|Medtr5g021160.1	Auxin-induced protein 5NG4 chr5 7866846-7869645 E EGN_Mt100125 20111014	GO:0000271|polysaccharide biosynthetic process GO:0006833|water transport GO:0007389|pattern specification process GO:0008361|regulation of cell size GO:0009651|response to salt stress GO:0009750|response to fructose stimulus GO:0009825|multidimensional cell growth GO:0009826|unidimensional cell growth GO:0009926|auxin polar transport GO:0009932|cell tip growth GO:0010015|root morphogenesis GO:0010075|regulation of meristem growth GO:0010817|regulation of hormone levels GO:0040007|growth GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0048767|root hair elongation GO:0071555|cell wall organization GO:0090355|positive regulation of auxin metabolic process GO:0090358|positive regulation of tryptophan metabolic process	NA	GO:0005774|vacuolar membrane GO:0005886|plasma membrane GO:0009705|plant-type vacuole membrane GO:0016020|membrane
pt2_05242	A	A1S	Potri.002G029200	Potri.002G029200(AS)	POPTR_0002s03070	sp|Q9M390|PTR1_ARATH	Peptide transporter PTR1 OS=Arabidopsis thaliana GN=PTR1 PE=2 SV=1	AT3G54140.1	| Symbols: ATPTR1, PTR1 | peptide transporter 1 | chr3:20045885-20048154 REVERSE LENGTH=570	LOC_Os01g04950.2	protein|peptide transporter PTR2, putative, expressed	IMGA|Medtr5g055000.1	Peptide transporter PTR chr5 22113111-22119217 F EGN_Mt100125 20111014	GO:0006807|nitrogen compound metabolic process GO:0006857|oligopeptide transport GO:0015824|proline transport GO:0015996|chlorophyll catabolic process GO:0042938|dipeptide transport GO:0042939|tripeptide transport	GO:0005215|transporter activity GO:0042936|dipeptide transporter activity GO:0042937|tripeptide transporter activity	GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane
pt2_05243	A	A1S	Potri.002G029300	Potri.002G029300(AS)	POPTR_0002s03080	sp|Q9SDZ9|PPAF2_IPOBA	Purple acid phosphatase 2 OS=Ipomoea batatas GN=PAP2 PE=1 SV=1	AT2G16430.2	| Symbols: PAP10, ATPAP10 | purple acid phosphatase 10 | chr2:7120502-7122772 REVERSE LENGTH=468	LOC_Os01g56880.1	protein|purple acid phosphatase precursor, putative, expressed	IMGA|Medtr5g092360.1	Purple acid phosphatase chr5 39299066-39296046 E EGN_Mt100125 20111014	GO:0016036|cellular response to phosphate starvation	GO:0003993|acid phosphatase activity GO:0004722|protein serine/threonine phosphatase activity GO:0016787|hydrolase activity GO:0046872|metal ion binding	GO:0005576|extracellular region GO:0005618|cell wall GO:0005829|cytosol GO:0009505|plant-type cell wall GO:0009506|plasmodesma
pt2_05244	A	A1S	Potri.002G029400	Potri.002G029400(AS)	POPTR_0002s03090	sp|Q9LQZ2|DRE2D_ARATH	Dehydration-responsive element-binding protein 2D OS=Arabidopsis thaliana GN=DREB2D PE=2 SV=1	AT1G75490.1	| Symbols: | Integrase-type DNA-binding superfamily protein | chr1:28336045-28336665 FORWARD LENGTH=206	LOC_Os08g45110.1	protein|AP2 domain containing protein, expressed	IMGA|Medtr5g083340.1	Ethylene-responsive element binding protein chr5 34967933-34965639 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0010200|response to chitin	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_05245	A	A1S	Potri.002G029500	Potri.002G029500(AS)	POPTR_0002s03095	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05246	A	A1S	Potri.002G029600	Potri.002G029600(AS)	POPTR_0002s03100	sp|B5YEQ1|OBG_DICT6	GTPase obg OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=obg PE=3 SV=1	AT5G18570.1	| Symbols: EMB269, ATOBGC, CPSAR1 | GTP1/OBG family protein | chr5:6171839-6174823 REVERSE LENGTH=681	LOC_Os03g58540.1	protein|spo0B-associated GTP-binding protein, putative, expressed	IMGA|Medtr1g023160.1	GTPase obg chr1 7079159-7084362 E EGN_Mt100125 20111014	GO:0006364|rRNA processing GO:0009416|response to light stimulus GO:0009658|chloroplast organization GO:0009790|embryo development GO:0009793|embryo development ending in seed dormancy GO:0010027|thylakoid membrane organization GO:0016556|mRNA modification	GO:0000166|nucleotide binding GO:0000287|magnesium ion binding GO:0003924|GTPase activity GO:0005525|GTP binding	GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009706|chloroplast inner membrane
pt2_05247	A	A1S	Potri.002G029700	Potri.002G029700(AS)	POPTR_0002s03110	sp|A7SWD3|U559_NEMVE	UPF0559 protein v1g247787 OS=Nematostella vectensis GN=v1g247787 PE=3 SV=1	AT1G06060.1	| Symbols: | LisH and RanBPM domains containing protein | chr1:1833071-1834516 FORWARD LENGTH=213	LOC_Os01g56820.1	protein|AGAP000951-PA, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_05248	C	C1S	Potri.002G029800	Potri.002G029800(CS)	sp|P25251|CYSP4_BRANA	Cysteine proteinase COT44 (Fragment) OS=Brassica napus PE=2 SV=1	AT1G09850.1	| Symbols: XBCP3 | xylem bark cysteine peptidase 3 | chr1:3201848-3203875 FORWARD LENGTH=437	LOC_Os05g43230.1	protein|oryzain alpha chain precursor, putative, expressed	IMGA|Medtr1g018840.2	Cysteine proteinase chr1 5706940-5702641 F EGN_Mt100125 20111014	GO:0006508|proteolysis	GO:0008234|cysteine-type peptidase activity	GO:0005576|extracellular region GO:0005773|vacuole GO:0005783|endoplasmic reticulum
pt2_05249	A	A1S	Potri.002G029900	Potri.002G029900(AS)	POPTR_0002s03130	NA	NA	AT1G75460.1	| Symbols: | ATP-dependent protease La (LON) domain protein | chr1:28327986-28328822 FORWARD LENGTH=278	LOC_Os07g32560.1	protein|ATP-dependent protease, putative, expressed	NA	NA	GO:0000165|MAPK cascade GO:0006355|regulation of transcription, DNA-dependent GO:0006508|proteolysis GO:0006612|protein targeting to membrane GO:0009617|response to bacterium GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010207|photosystem II assembly GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0031348|negative regulation of defense response GO:0035304|regulation of protein dephosphorylation	GO:0004176|ATP-dependent peptidase activity	GO:0009507|chloroplast
pt2_05250	A	A1S	Potri.002G030000	Potri.002G030000(AS)	POPTR_0002s03140	sp|Q43636|TRXH_RICCO	Thioredoxin H-type OS=Ricinus communis PE=3 SV=1	AT3G51030.1	| Symbols: ATTRX1, ATTRX H1, TRX1 | thioredoxin H-type 1 | chr3:18951123-18951955 REVERSE LENGTH=114	LOC_Os07g08840.1	protein|thioredoxin, putative, expressed	IMGA|Medtr1g023140.1	Thioredoxin H-type chr1 7077093-7074970 F EGN_Mt100125 20111014	GO:0006662|glycerol ether metabolic process GO:0006979|response to oxidative stress GO:0010188|response to microbial phytotoxin GO:0043085|positive regulation of catalytic activity GO:0045454|cell redox homeostasis GO:0046686|response to cadmium ion GO:0050832|defense response to fungus	GO:0008047|enzyme activator activity GO:0009055|electron carrier activity GO:0015035|protein disulfide oxidoreductase activity GO:0016671|oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0048046|apoplast
pt2_05251	A	A1S	Potri.002G030000	Potri.002G030000(AS)	POPTR_0002s03140	sp|Q43636|TRXH_RICCO	Thioredoxin H-type OS=Ricinus communis PE=3 SV=1	AT3G51030.1	| Symbols: ATTRX1, ATTRX H1, TRX1 | thioredoxin H-type 1 | chr3:18951123-18951955 REVERSE LENGTH=114	LOC_Os07g08840.1	protein|thioredoxin, putative, expressed	IMGA|Medtr1g023140.1	Thioredoxin H-type chr1 7077093-7074970 F EGN_Mt100125 20111014	GO:0006662|glycerol ether metabolic process GO:0006979|response to oxidative stress GO:0010188|response to microbial phytotoxin GO:0043085|positive regulation of catalytic activity GO:0045454|cell redox homeostasis GO:0046686|response to cadmium ion GO:0050832|defense response to fungus	GO:0008047|enzyme activator activity GO:0009055|electron carrier activity GO:0015035|protein disulfide oxidoreductase activity GO:0016671|oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0048046|apoplast
pt2_05252	A	A1S	Potri.002G030000	Potri.002G030000(AS)	POPTR_0002s03140	sp|Q43636|TRXH_RICCO	Thioredoxin H-type OS=Ricinus communis PE=3 SV=1	AT3G51030.1	| Symbols: ATTRX1, ATTRX H1, TRX1 | thioredoxin H-type 1 | chr3:18951123-18951955 REVERSE LENGTH=114	LOC_Os07g08840.1	protein|thioredoxin, putative, expressed	IMGA|Medtr1g023140.1	Thioredoxin H-type chr1 7077093-7074970 F EGN_Mt100125 20111014	GO:0006662|glycerol ether metabolic process GO:0006979|response to oxidative stress GO:0010188|response to microbial phytotoxin GO:0043085|positive regulation of catalytic activity GO:0045454|cell redox homeostasis GO:0046686|response to cadmium ion GO:0050832|defense response to fungus	GO:0008047|enzyme activator activity GO:0009055|electron carrier activity GO:0015035|protein disulfide oxidoreductase activity GO:0016671|oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0048046|apoplast
pt2_05253	A	A1S	Potri.002G030100	Potri.002G030100(AS)	POPTR_0002s03150	sp|P82859|LECA_CASCR	Agglutinin OS=Castanea crenata PE=1 SV=1	AT1G19715.2	| Symbols: | Mannose-binding lectin superfamily protein | chr1:6816934-6819244 REVERSE LENGTH=571	LOC_Os05g43240.3	protein|jacalin-like lectin domain containing protein, expressed	IMGA|Medtr5g071200.1	Myrosinase-binding protein-like protein chr5 29235453-29238372 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005576|extracellular region
pt2_05254	A	A1S	Potri.002G030200	Potri.002G030200(AS)	POPTR_0002s03160	sp|Q9FXH1|PPR52_ARATH	Pentatricopeptide repeat-containing protein At1g19720 OS=Arabidopsis thaliana GN=DYW7 PE=2 SV=1	AT1G19720.1	| Symbols: | Pentatricopeptide repeat (PPR-like) superfamily protein | chr1:6819926-6822610 REVERSE LENGTH=894	LOC_Os03g59264.1	protein|calreticulin family protein, expressed	IMGA|Medtr5g071190.1	Pentatricopeptide repeat-containing protein chr5 29231834-29234497 E EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005634|nucleus GO:0005737|cytoplasm GO:0009507|chloroplast
pt2_05255	A	A1S	Potri.002G030300	Potri.002G030300(AS)	POPTR_0002s03170	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05256	A	A1S	Potri.002G030400	Potri.002G030400(AS)	POPTR_0002s03180	sp|P82859|LECA_CASCR	Agglutinin OS=Castanea crenata PE=1 SV=1	AT1G19715.3	| Symbols: | Mannose-binding lectin superfamily protein | chr1:6816934-6819432 REVERSE LENGTH=601	LOC_Os05g43240.3	protein|jacalin-like lectin domain containing protein, expressed	IMGA|Medtr5g071200.1	Myrosinase-binding protein-like protein chr5 29235453-29238372 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005576|extracellular region
pt2_05257	A	A1S	Potri.002G030500	Potri.002G030500(AS)	POPTR_0002s03190	sp|Q67YU0|CKX5_ARATH	Cytokinin dehydrogenase 5 OS=Arabidopsis thaliana GN=CKX5 PE=2 SV=1	AT1G75450.1	| Symbols: CKX5, ATCKX5, ATCKX6 | cytokinin oxidase 5 | chr1:28315248-28318064 REVERSE LENGTH=540	LOC_Os01g56810.1	protein|cytokinin dehydrogenase precursor, putative, expressed	IMGA|Medtr1g015410.1	Cytokinin dehydrogenase chr1 4243565-4248963 F EGN_Mt100125 20111014	GO:0009690|cytokinin metabolic process GO:0009694|jasmonic acid metabolic process GO:0009753|response to jasmonic acid stimulus GO:0009823|cytokinin catabolic process GO:0055114|oxidation-reduction process	GO:0003824|catalytic activity GO:0008762|UDP-N-acetylmuramate dehydrogenase activity GO:0016491|oxidoreductase activity GO:0016614|oxidoreductase activity, acting on CH-OH group of donors GO:0019139|cytokinin dehydrogenase activity GO:0050660|flavin adenine dinucleotide binding	GO:0005576|extracellular region
pt2_05258	A	A1A	Potri.002G030500	Potri.002G030500(AA)	POPTR_0002s03200	sp|Q67YU0|CKX5_ARATH	Cytokinin dehydrogenase 5 OS=Arabidopsis thaliana GN=CKX5 PE=2 SV=1	AT1G75450.1	| Symbols: CKX5, ATCKX5, ATCKX6 | cytokinin oxidase 5 | chr1:28315248-28318064 REVERSE LENGTH=540	LOC_Os01g56810.1	protein|cytokinin dehydrogenase precursor, putative, expressed	IMGA|Medtr1g015410.1	Cytokinin dehydrogenase chr1 4243565-4248963 F EGN_Mt100125 20111014	GO:0009690|cytokinin metabolic process GO:0009694|jasmonic acid metabolic process GO:0009753|response to jasmonic acid stimulus GO:0009823|cytokinin catabolic process GO:0055114|oxidation-reduction process	GO:0003824|catalytic activity GO:0008762|UDP-N-acetylmuramate dehydrogenase activity GO:0016491|oxidoreductase activity GO:0016614|oxidoreductase activity, acting on CH-OH group of donors GO:0019139|cytokinin dehydrogenase activity GO:0050660|flavin adenine dinucleotide binding	GO:0005576|extracellular region
pt2_05259	G	G1	NA	NA	POPTR_0002s03210	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05260	A	A2S	Potri.002G030800	Potri.002G030800(AS) Potri.005G232100(BS)	POPTR_0002s03220	sp|Q9FMM0|UBC18_ARATH	Probable ubiquitin-conjugating enzyme E2 18 OS=Arabidopsis thaliana GN=UBC18 PE=2 SV=1	AT5G42990.1	| Symbols: UBC18 | ubiquitin-conjugating enzyme 18 | chr5:17244206-17245904 REVERSE LENGTH=161	LOC_Os03g47770.1	protein|ubiquitin-conjugating enzyme E2 W, putative, expressed	IMGA|Medtr5g021260.1	Ubiquitin carrier protein chr5 7933802-7938594 F EGN_Mt100125 20111014	GO:0006511|ubiquitin-dependent protein catabolic process	GO:0004842|ubiquitin-protein ligase activity GO:0016881|acid-amino acid ligase activity	GO:0005634|nucleus
pt2_05261	A	A2S	Potri.002G030900	Potri.002G030900(AS) Potri.005G232000(BS)	POPTR_0002s03230	sp|Q1PFD1|BLH11_ARATH	BEL1-like homeodomain protein 11 OS=Arabidopsis thaliana GN=BLH11 PE=2 SV=1	AT1G75430.1	| Symbols: BLH11 | BEL1-like homeodomain 11 | chr1:28308121-28309517 REVERSE LENGTH=290	LOC_Os12g43950.3	protein|homeobox domain containing protein, expressed	IMGA|Medtr5g018860.1	BEL1-like homeodomain protein chr5 6810765-6801813 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_05262	A	A1S	Potri.002G031000	Potri.002G031000(AS)	POPTR_0002s03240	sp|Q9FWS9|BLH3_ARATH	BEL1-like homeodomain protein 3 OS=Arabidopsis thaliana GN=BLH3 PE=1 SV=1	AT1G75410.2	| Symbols: BLH3 | BEL1-like homeodomain 3 | chr1:28300095-28301890 REVERSE LENGTH=524	LOC_Os12g43950.3	protein|homeobox domain containing protein, expressed	IMGA|Medtr5g018860.1	BEL1-like homeodomain protein chr5 6810765-6801813 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_05263	A	A1S	Potri.002G031100	Potri.002G031100(AS)	POPTR_0002s03250	sp|P25519|HFLX_ECOLI	GTPase HflX OS=Escherichia coli (strain K12) GN=hflX PE=1 SV=3	AT5G57960.1	| Symbols: | GTP-binding protein, HflX | chr5:23463133-23466481 REVERSE LENGTH=540	LOC_Os11g38020.1	protein|GTPase of unknown function domain containing protein, putative, expressed	IMGA|Medtr5g089970.1	GTP-binding protein chr5 38104098-38099150 E EGN_Mt100125 20111014	GO:0006897|endocytosis	GO:0005525|GTP binding	GO:0009507|chloroplast
pt2_05264	A	A1S	Potri.002G031200	Potri.002G031200(AS)	POPTR_0002s03260	sp|Q96512|PER9_ARATH	Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 SV=1	AT1G44970.1	| Symbols: | Peroxidase superfamily protein | chr1:17002237-17003563 FORWARD LENGTH=346	LOC_Os01g15810.1	protein|peroxidase precursor, putative, expressed	IMGA|Medtr5g021060.2	Peroxidase chr5 7821272-7822903 F EGN_Mt100125 20111014	GO:0006979|response to oxidative stress GO:0055114|oxidation-reduction process	GO:0004601|peroxidase activity GO:0020037|heme binding	GO:0005576|extracellular region
pt2_05265	A	A1S	Potri.002G031300	Potri.002G031300(AS)	POPTR_0002s03270	NA	NA	AT1G75420.1	| Symbols: | UDP-Glycosyltransferase superfamily protein | chr1:28305469-28307317 FORWARD LENGTH=463	LOC_Os01g15780.1	protein|glycosyl transferase, group 1 domain containing protein, expressed	NA	NA	GO:0001666|response to hypoxia GO:0009058|biosynthetic process GO:0019375|galactolipid biosynthetic process	GO:0016757|transferase activity, transferring glycosyl groups	GO:0005575|cellular_component GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_05266	A	A2S	Potri.002G031400	Potri.002G031400(AS) Potri.005G231700(DS)	POPTR_0002s03280	sp|Q9MAK9|PS10B_ARATH	26S protease regulatory subunit S10B homolog B OS=Arabidopsis thaliana GN=RPT4B PE=2 SV=1	AT1G45000.1	| Symbols: | AAA-type ATPase family protein | chr1:17009220-17011607 FORWARD LENGTH=399	LOC_Os02g10640.1	protein|26S protease regulatory subunit, putative, expressed	IMGA|Medtr1g083330.1	26S protease regulatory subunit 6A-like protein chr1 21592984-21597408 F EGN_Mt100125 20111014	GO:0030163|protein catabolic process GO:0030244|cellulose biosynthetic process GO:0048193|Golgi vesicle transport	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016787|hydrolase activity GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity	GO:0000502|proteasome complex GO:0005618|cell wall GO:0005634|nucleus GO:0005730|nucleolus GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane
pt2_05267	A	A1S	Potri.002G031500	Potri.002G031500(AS)	POPTR_0002s03290	sp|P0AD12|YEEZ_ECOLI	Protein yeeZ OS=Escherichia coli (strain K12) GN=yeeZ PE=1 SV=1	AT1G19690.1	| Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr1:6807925-6809562 REVERSE LENGTH=352	LOC_Os01g15660.1	protein|NAD dependent epimerase/dehydratase family protein, putative, expressed	IMGA|Medtr1g022940.1	Protein yeeZ chr1 6975497-6973061 H EGN_Mt100125 20111014	GO:0044237|cellular metabolic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0050662|coenzyme binding	GO:0009507|chloroplast
pt2_05268	A	A1S	Potri.002G031600	Potri.002G031600(AS)	POPTR_0002s03300	NA	NA	AT1G75400.1	| Symbols: | RING/U-box superfamily protein | chr1:28297609-28299464 FORWARD LENGTH=455	LOC_Os01g15630.2	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr5g041750.1	hypothetical protein chr5 17920564-17914547 F EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_05269	A	A2S	Potri.002G031700	Potri.002G031700(AS) Potri.014G160900(DS)	POPTR_0002s03310	sp|P56331|IF1A_ONOVI	Eukaryotic translation initiation factor 1A OS=Onobrychis viciifolia PE=2 SV=2	AT2G04520.1	| Symbols: | Nucleic acid-binding, OB-fold-like protein | chr2:1574802-1575239 REVERSE LENGTH=145	LOC_Os06g23440.1	protein|eukaryotic translation initiation factor 1A, putative, expressed	NA	NA	GO:0006413|translational initiation	GO:0003723|RNA binding GO:0003743|translation initiation factor activity	GO:0005634|nucleus GO:0005829|cytosol
pt2_05270	A	A1S	Potri.002G031800	Potri.002G031800(AS)	POPTR_0002s03320	sp|Q8GZ79|TI201_ARATH	Protein TIC 20-I, chloroplastic OS=Arabidopsis thaliana GN=TIC20-I PE=1 SV=1	AT1G04940.1	| Symbols: TIC20 | translocon at the inner envelope membrane of chloroplasts 20 | chr1:1399588-1400616 FORWARD LENGTH=274	LOC_Os07g38110.2	protein|tic20, putative, expressed	IMGA|Medtr5g024800.1	hypothetical protein chr5 9738911-9737301 H EGN_Mt100125 20111014	GO:0006626|protein targeting to mitochondrion GO:0010207|photosystem II assembly GO:0045037|protein import into chloroplast stroma	NA	GO:0009507|chloroplast GO:0009706|chloroplast inner membrane GO:0016020|membrane
pt2_05271	A	A1S	Potri.002G031900	Potri.002G031900(AS)	POPTR_0002s03330	sp|P24068|OCS1_MAIZE	Ocs element-binding factor 1 OS=Zea mays GN=OBF1 PE=2 SV=2	AT1G75390.1	| Symbols: AtbZIP44, bZIP44 | basic leucine-zipper 44 | chr1:28292224-28292745 FORWARD LENGTH=173	LOC_Os02g03960.1	protein|CPuORF1 - conserved peptide uORF-containing transcript, expressed	IMGA|Medtr5g015090.1	Protein ABSCISIC ACID-INSENSITIVE chr5 4932703-4932230 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009410|response to xenobiotic stimulus GO:0030968|endoplasmic reticulum unfolded protein response	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding GO:0046982|protein heterodimerization activity GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_05272	A	A1S	Potri.002G032100	Potri.002G032100(AS)	POPTR_0002s03340	sp|Q40884|MAPK_PETHY	Mitogen-activated protein kinase homolog 1 OS=Petunia hybrida GN=MEK1 PE=2 SV=1	AT1G10210.2	| Symbols: ATMPK1, MPK1 | mitogen-activated protein kinase 1 | chr1:3349579-3350776 FORWARD LENGTH=370	LOC_Os02g05480.2	protein|CGMC_MAPKCMGC_2_SLT2y_ERK.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	IMGA|contig_77196_1.1	Mitogen-activated protein kinase contig_77196 1552-888 F PREDN 20111014	GO:0000165|MAPK cascade GO:0000303|response to superoxide GO:0006355|regulation of transcription, DNA-dependent GO:0006468|protein phosphorylation GO:0006612|protein targeting to membrane GO:0006635|fatty acid beta-oxidation GO:0006970|response to osmotic stress GO:0007165|signal transduction GO:0008219|cell death GO:0009409|response to cold GO:0009617|response to bacterium GO:0009651|response to salt stress GO:0009733|response to auxin stimulus GO:0009734|auxin mediated signaling pathway GO:0009737|response to abscisic acid stimulus GO:0009743|response to carbohydrate stimulus GO:0009751|response to salicylic acid stimulus GO:0009755|hormone-mediated signaling pathway GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009873|ethylene mediated signaling pathway GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0010374|stomatal complex development GO:0016558|protein import into peroxisome matrix GO:0031348|negative regulation of defense response GO:0035304|regulation of protein dephosphorylation GO:0035556|intracellular signal transduction GO:0043069|negative regulation of programmed cell death GO:0048481|ovule development GO:0051707|response to other organism	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004707|MAP kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus
pt2_05273	A	A1S	Potri.002G032200	Potri.002G032200(AS)	POPTR_0002s03350	sp|Q94CD1|HHT1_ARATH	Omega-hydroxypalmitate O-feruloyl transferase OS=Arabidopsis thaliana GN=HHT1 PE=1 SV=1	AT1G27620.1	| Symbols: | HXXXD-type acyl-transferase family protein | chr1:9608444-9610432 FORWARD LENGTH=442	LOC_Os01g28474.1	protein|transferase family protein, putative, expressed	IMGA|Medtr5g076700.1	Benzoyl coenzyme A benzyl alcohol benzoyl transferase chr5 31729976-31732699 H EGN_Mt100125 20111014	NA	GO:0016740|transferase activity GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0005737|cytoplasm
pt2_05274	A	A1S	Potri.002G032300	Potri.002G032300(AS)	POPTR_0002s03360	sp|Q2QQS5|CCT14_ORYSJ	Cyclin-T1-4 OS=Oryza sativa subsp. japonica GN=CYCT1-1 PE=2 SV=1	AT5G45190.1	| Symbols: | Cyclin family protein | chr5:18277808-18280733 REVERSE LENGTH=579	LOC_Os12g30020.2	protein|cyclin-T1-4, putative, expressed	IMGA|Medtr5g055170.1	Cyclin-L1-1 chr5 22186882-22182089 F EGN_Mt100125 20111014	GO:0000079|regulation of cyclin-dependent protein kinase activity GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0006355|regulation of transcription, DNA-dependent GO:0006366|transcription from RNA polymerase II promoter GO:0006486|protein glycosylation GO:0008284|positive regulation of cell proliferation GO:0009615|response to virus GO:0009630|gravitropism GO:0009908|flower development GO:0010090|trichome morphogenesis GO:0048366|leaf development GO:0050792|regulation of viral reproduction GO:0051726|regulation of cell cycle	GO:0004693|cyclin-dependent protein kinase activity GO:0019901|protein kinase binding	GO:0005634|nucleus
pt2_05275	A	A1S	Potri.002G032400	Potri.002G032400(AS)	POPTR_0002s03380	sp|Q9SFZ3|BH110_ARATH	Transcription factor bHLH110 OS=Arabidopsis thaliana GN=BHLH110 PE=2 SV=2	AT1G27660.1	| Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr1:9621701-9625666 FORWARD LENGTH=453	LOC_Os01g01600.1	protein|ethylene-responsive protein related, putative, expressed	NA	NA	NA	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_05276	A	A1S	Potri.002G032400	Potri.002G032400(AS)	POPTR_0002s03380	sp|Q9SFZ3|BH110_ARATH	Transcription factor bHLH110 OS=Arabidopsis thaliana GN=BHLH110 PE=2 SV=2	AT1G27660.1	| Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr1:9621701-9625666 FORWARD LENGTH=453	LOC_Os01g01600.1	protein|ethylene-responsive protein related, putative, expressed	NA	NA	NA	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_05277	A	A2S	Potri.002G032500	Potri.002G032500(AS) Potri.005G230600(BS)	POPTR_0002s03390	NA	NA	AT1G19660.2	| Symbols: | Wound-responsive family protein | chr1:6800361-6802240 REVERSE LENGTH=329	LOC_Os08g26870.4	protein|wound responsive protein, putative, expressed	IMGA|Medtr5g023110.1	hypothetical protein chr5 8923321-8926838 F EGN_Mt100125 20111014	GO:0006289|nucleotide-excision repair GO:0009611|response to wounding GO:0050832|defense response to fungus	GO:0003677|DNA binding GO:0004518|nuclease activity	NA
pt2_05278	A	A1S	Potri.002G032600	Potri.002G032600(AS)	POPTR_0002s03400	sp|P24280|SEC14_YEAST	SEC14 cytosolic factor OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEC14 PE=1 SV=3	AT2G21520.1	| Symbols: | Sec14p-like phosphatidylinositol transfer family protein | chr2:9215956-9218953 FORWARD LENGTH=633	LOC_Os02g04020.1	protein|expressed protein	IMGA|Medtr5g021050.1	Phosphatidylinositol transfer-like protein IV chr5 7812729-7816184 E EGN_Mt100125 20111014	GO:0006810|transport	GO:0005215|transporter activity	GO:0005622|intracellular GO:0005739|mitochondrion GO:0005794|Golgi apparatus
pt2_05279	A	A2S	Potri.002G032700	Potri.002G032700(AS) Potri.002G032600(AA)	POPTR_0002s03410	sp|Q9P6Q3|BCS1_SCHPO	Probable mitochondrial chaperone bcs1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC644.07 PE=2 SV=1	AT3G50930.1	| Symbols: BCS1 | cytochrome BC1 synthesis | chr3:18929817-18931547 FORWARD LENGTH=576	LOC_Os05g51130.1	protein|mitochondrial chaperone BCS1, putative, expressed	IMGA|Medtr5g020980.1	Cell division protease ftsH-like protein chr5 7784485-7791673 E EGN_Mt100125 20111014	GO:0009611|response to wounding GO:0009612|response to mechanical stimulus GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process GO:0010200|response to chitin GO:0052542|defense response by callose deposition	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity	GO:0005739|mitochondrion GO:0005886|plasma membrane
pt2_05280	C	C1S	Potri.002G032800	Potri.002G032800(CS)	NA	NA	NA	NA	NA	NA	NA	NA	GO:0030001|metal ion transport	GO:0046872|metal ion binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05281	A	A1S	Potri.002G032900	Potri.002G032900(AS)	POPTR_0002s03430	sp|Q93YN9|IPPK_ARATH	Inositol-pentakisphosphate 2-kinase OS=Arabidopsis thaliana GN=IPK1 PE=1 SV=1	AT5G42810.1	| Symbols: ATIPK1, IPK1 | inositol-pentakisphosphate 2-kinase 1 | chr5:17167073-17169337 FORWARD LENGTH=451	LOC_Os04g56580.1	protein|inositol 1,3,4,5,6-pentakisphosphate 2-kinase, putative, expressed	NA	NA	NA	GO:0005524|ATP binding GO:0035299|inositol pentakisphosphate 2-kinase activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05282	A	A1S	Potri.002G033000	Potri.002G033000(AS)	POPTR_0002s03440	sp|Q05JG2|ABAH1_ORYSJ	Abscisic acid 8'-hydroxylase 1 OS=Oryza sativa subsp. japonica GN=CYP707A5 PE=2 SV=1	AT1G19630.1	| Symbols: CYP722A1 | cytochrome P450, family 722, subfamily A, polypeptide 1 | chr1:6785427-6787967 REVERSE LENGTH=476	LOC_Os05g01120.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g025610.1	Abscisic acid 8'-hydroxylase chr5 10165401-10168264 F EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005576|extracellular region
pt2_05283	A	A1S	Potri.002G033100	Potri.002G033100(AS)	POPTR_0002s03450	NA	NA	AT5G66440.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:26530274-26531032 REVERSE LENGTH=252	NA	NA	NA	NA	NA	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_05284	A	A1S	Potri.002G033200	Potri.002G033200(AS)	POPTR_0002s03460	NA	NA	AT1G19610.1	| Symbols: LCR78, PDF1.4 | Arabidopsis defensin-like protein | chr1:6781674-6782024 REVERSE LENGTH=78	NA	NA	NA	NA	GO:0006952|defense response	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_05285	A	A1S	Potri.002G033300	Potri.002G033300(AS)	POPTR_0002s03470	sp|Q9FWS4|RK31_ARATH	50S ribosomal protein L31, chloroplastic OS=Arabidopsis thaliana GN=RPL31 PE=1 SV=1	AT1G75350.1	| Symbols: emb2184 | Ribosomal protein L31 | chr1:28272163-28272687 FORWARD LENGTH=144	LOC_Os01g44210.1	protein|50S ribosomal protein L31, putative, expressed	NA	NA	GO:0006098|pentose-phosphate shunt GO:0006364|rRNA processing GO:0006412|translation GO:0009657|plastid organization GO:0009773|photosynthetic electron transport in photosystem I GO:0009793|embryo development ending in seed dormancy GO:0009902|chloroplast relocation GO:0010027|thylakoid membrane organization GO:0010207|photosystem II assembly GO:0015979|photosynthesis GO:0015995|chlorophyll biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0034660|ncRNA metabolic process	GO:0003735|structural constituent of ribosome	GO:0005840|ribosome GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope
pt2_05286	A	A1S	Potri.002G033400	Potri.002G033400(AS)	POPTR_0002s03480	sp|P55233|GLGL1_BETVU	Glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic OS=Beta vulgaris GN=AGPS1 PE=2 SV=1	AT1G27680.1	| Symbols: APL2 | ADPGLC-PPase large subunit | chr1:9631630-9634450 FORWARD LENGTH=518	LOC_Os05g50380.1	protein|glucose-1-phosphate adenylyltransferase large subunit, chloroplast precursor, putative, expressed	IMGA|Medtr5g097010.1	Glucose-1-phosphate adenylyltransferase chr5 41424267-41428210 F EGN_Mt100125 20111014	GO:0009058|biosynthetic process GO:0019252|starch biosynthetic process	GO:0008878|glucose-1-phosphate adenylyltransferase activity GO:0016779|nucleotidyltransferase activity	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_05287	A	A2S	Potri.002G033400	Potri.002G033400(AS) Potri.005G229700(DS)	POPTR_0002s03480	sp|P55233|GLGL1_BETVU	Glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic OS=Beta vulgaris GN=AGPS1 PE=2 SV=1	AT1G27680.1	| Symbols: APL2 | ADPGLC-PPase large subunit | chr1:9631630-9634450 FORWARD LENGTH=518	LOC_Os05g50380.1	protein|glucose-1-phosphate adenylyltransferase large subunit, chloroplast precursor, putative, expressed	IMGA|Medtr5g097010.1	Glucose-1-phosphate adenylyltransferase chr5 41424267-41428210 F EGN_Mt100125 20111014	GO:0009058|biosynthetic process GO:0019252|starch biosynthetic process	GO:0008878|glucose-1-phosphate adenylyltransferase activity GO:0016779|nucleotidyltransferase activity	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_05288	C	C1S	Potri.002G033400	Potri.002G033400(CS)	sp|P55233|GLGL1_BETVU	Glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic OS=Beta vulgaris GN=AGPS1 PE=2 SV=1	AT1G27680.1	| Symbols: APL2 | ADPGLC-PPase large subunit | chr1:9631630-9634450 FORWARD LENGTH=518	LOC_Os05g50380.1	protein|glucose-1-phosphate adenylyltransferase large subunit, chloroplast precursor, putative, expressed	IMGA|Medtr5g097010.1	Glucose-1-phosphate adenylyltransferase chr5 41424267-41428210 F EGN_Mt100125 20111014	GO:0009058|biosynthetic process GO:0019252|starch biosynthetic process	GO:0008878|glucose-1-phosphate adenylyltransferase activity GO:0016779|nucleotidyltransferase activity	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_05289	A	A1S	Potri.002G033500	Potri.002G033500(AS)	POPTR_0002s03490	sp|Q9FJZ3|MAN7_ARATH	Mannan endo-1,4-beta-mannosidase 7 OS=Arabidopsis thaliana GN=MAN7 PE=2 SV=1	AT5G66460.1	| Symbols: MAN7, AtMAN7 | Glycosyl hydrolase superfamily protein | chr5:26538911-26540837 REVERSE LENGTH=431	LOC_Os01g47400.1	protein|OsMan01 - Endo-Beta-Mannanase, expressed	IMGA|Medtr5g020890.1	"Mannan endo-1,4-beta-mannosidase" chr5 7753296-7756457 F EGN_Mt100125 20111014	GO:0008152|metabolic process GO:0009845|seed germination GO:0009855|determination of bilateral symmetry GO:0009944|polarity specification of adaxial/abaxial axis GO:0010014|meristem initiation GO:0010075|regulation of meristem growth	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0043169|cation binding	GO:0005576|extracellular region
pt2_05290	A	A1S	Potri.002G033600	Potri.002G033600(AS)	POPTR_0002s03500	sp|Q9XES5|DFRA_MALDO	Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Malus domestica GN=DFR PE=1 SV=1	AT5G42800.1	| Symbols: DFR, TT3, M318 | dihydroflavonol 4-reductase | chr5:17164296-17165864 REVERSE LENGTH=382	LOC_Os01g44260.1	protein|dihydroflavonol-4-reductase, putative, expressed	IMGA|Medtr5g056600.1	Dihydroflavonol-4-reductase chr5 22769137-22766374 F EGN_Mt100125 20111014	GO:0009718|anthocyanin-containing compound biosynthetic process GO:0009744|response to sucrose stimulus GO:0010224|response to UV-B GO:0044237|cellular metabolic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0045552|dihydrokaempferol 4-reductase activity GO:0050662|coenzyme binding	GO:0042406|extrinsic to endoplasmic reticulum membrane
pt2_05291	A	A1S	Potri.002G033700	Potri.002G033700(AS)	POPTR_0002s03510	sp|Q43814|OTC_PEA	Ornithine carbamoyltransferase, chloroplastic OS=Pisum sativum GN=ARGF PE=2 SV=1	AT1G75330.1	| Symbols: OTC | ornithine carbamoyltransferase | chr1:28266457-28268383 REVERSE LENGTH=375	LOC_Os02g47590.1	protein|ornithine carbamoyltransferase, putative, expressed	NA	NA	GO:0006164|purine nucleotide biosynthetic process GO:0006520|cellular amino acid metabolic process GO:0048481|ovule development	GO:0016597|amino acid binding GO:0016743|carboxyl- or carbamoyltransferase activity	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_05292	B	B2S	Potri.002G033800	Potri.002G033800(BS) Potri.005G229300(DS)	POPTR_0002s03520	sp|Q0WQ57|AUXI2_ARATH	Auxilin-related protein 2 OS=Arabidopsis thaliana GN=At4g12770 PE=1 SV=1	AT4G36520.1	| Symbols: | Chaperone DnaJ-domain superfamily protein | chr4:17230589-17235435 REVERSE LENGTH=1422	LOC_Os05g50370.1	protein|dnaJ domain containing protein, expressed	NA	NA	GO:0006457|protein folding	GO:0031072|heat shock protein binding	GO:0009507|chloroplast
pt2_05293	A	A2S	Potri.002G033900	Potri.002G033900(AS) Potri.005G229200(DS)	POPTR_0002s03530	sp|P34066|PSA1A_ARATH	Proteasome subunit alpha type-1-A OS=Arabidopsis thaliana GN=PAF1 PE=1 SV=3	AT5G42790.1	| Symbols: PAF1, ATPSM30, ARS5 | proteasome alpha subunit F1 | chr5:17159270-17160975 REVERSE LENGTH=278	LOC_Os02g04100.1	protein|peptidase, T1 family, putative, expressed	IMGA|contig_66018_1.1	Proteasome subunit alpha type contig_66018 2432-1741 E PREDN 20111014	GO:0006511|ubiquitin-dependent protein catabolic process GO:0051603|proteolysis involved in cellular protein catabolic process	GO:0004175|endopeptidase activity GO:0004298|threonine-type endopeptidase activity GO:0008233|peptidase activity	GO:0000502|proteasome complex GO:0005737|cytoplasm GO:0005829|cytosol GO:0005839|proteasome core complex GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0019773|proteasome core complex, alpha-subunit complex
pt2_05294	B	B1S	Potri.002G034000	Potri.002G034000(BS)	POPTR_0002s03540	sp|Q55480|YZ37_SYNY3	Uncharacterized sugar kinase slr0537 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr0537 PE=3 SV=1	AT1G19600.1	| Symbols: | pfkB-like carbohydrate kinase family protein | chr1:6779085-6780898 FORWARD LENGTH=355	LOC_Os01g01620.1	protein|kinase, pfkB family, putative, expressed	NA	NA	GO:0019303|D-ribose catabolic process	GO:0016301|kinase activity	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_05295	A	A2S	Potri.002G034100	Potri.002G034100(AS) Potri.005G229000(DS)	POPTR_0002s03550	sp|Q9FWR5|GCA1_ARATH	Gamma carbonic anhydrase 1, mitochondrial OS=Arabidopsis thaliana GN=GAMMACA1 PE=1 SV=1	AT1G19580.1	| Symbols: GAMMA CA1 | gamma carbonic anhydrase 1 | chr1:6774937-6777092 FORWARD LENGTH=275	LOC_Os12g07220.1	protein|bacterial transferase hexapeptide domain containing protein, expressed	IMGA|Medtr5g020850.1	Transcription factor APFI-like protein chr5 7733139-7736736 F EGN_Mt100125 20111014	GO:0009853|photorespiration GO:0019252|starch biosynthetic process	GO:0004089|carbonate dehydratase activity GO:0016740|transferase activity	GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0005747|mitochondrial respiratory chain complex I GO:0031966|mitochondrial membrane GO:0045271|respiratory chain complex I
pt2_05296	A	A1S	Potri.002G034200	Potri.002G034200(AS)	POPTR_0002s03560	sp|O48671|RER1B_ARATH	Protein RER1B OS=Arabidopsis thaliana GN=RER1B PE=2 SV=2	AT2G21600.1	| Symbols: ATRER1B, RER1B | endoplasmatic reticulum retrieval protein 1B | chr2:9243550-9244579 FORWARD LENGTH=195	LOC_Os01g01640.1	protein|Rer1 protein, putative, expressed	IMGA|Medtr5g016560.1	RER1A protein chr5 5693812-5695936 F EGN_Mt100125 20111014	GO:0006890|retrograde vesicle-mediated transport, Golgi to ER GO:0006891|intra-Golgi vesicle-mediated transport GO:0006944|cellular membrane fusion	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0005783|endoplasmic reticulum GO:0005794|Golgi apparatus GO:0005801|cis-Golgi network
pt2_05297	A	A1S	Potri.002G034300	Potri.002G034300(AS)	POPTR_0002s03570	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0009506|plasmodesma
pt2_05298	A	A3S	Potri.002G034400	Potri.002G034400(AS) Potri.005G228700(DS) Potri.005G228800(DA)	POPTR_0002s03580	sp|P52577|IFRH_ARATH	Isoflavone reductase homolog P3 OS=Arabidopsis thaliana GN=At1g75280 PE=1 SV=1	AT1G75280.1	| Symbols: | NmrA-like negative transcriptional regulator family protein | chr1:28252030-28253355 FORWARD LENGTH=310	LOC_Os06g27770.1	protein|isoflavone reductase homolog IRL, putative, expressed	IMGA|Medtr5g020740.1	Isoflavone reductase-like protein chr5 7684782-7686665 F EGN_Mt100125 20111014	GO:0006979|response to oxidative stress GO:0046686|response to cadmium ion	GO:0000166|nucleotide binding	GO:0005737|cytoplasm GO:0005886|plasma membrane
pt2_05299	D	D1S	Potri.002G034500	Potri.002G034500(DS)	POPTR_0002s03590	NA	NA	AT1G19530.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation, anaerobic respiration; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf apex, inflorescence meristem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; Has 47 Blast hits to 47 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:6763976-6764686 FORWARD LENGTH=117	LOC_Os03g61150.2	protein|expressed protein	NA	NA	GO:0006499|N-terminal protein myristoylation GO:0009061|anaerobic respiration	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05300	A	A1S	Potri.002G034600	Potri.002G034600(AS)	POPTR_0002s03600	sp|Q6Z2G9|TLP5_ORYSJ	Tubby-like F-box protein 5 OS=Oryza sativa subsp. japonica GN=TULP5 PE=2 SV=1	AT1G47270.2	| Symbols: TLP6 | tubby like protein 6 | chr1:17326828-17328564 FORWARD LENGTH=412	LOC_Os02g47640.1	protein|OsFBT4 - F-box and tubby domain containing protein, expressed	IMGA|Medtr5g020580.1	Tubby-like F-box protein chr5 7624254-7620655 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009555|pollen development	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008081|phosphoric diester hydrolase activity	GO:0005634|nucleus
pt2_05301	A	A2S	Potri.002G034700	Potri.002G034700(AS) Potri.002G034600(AA)	POPTR_0002s03610	NA	NA	AT1G75260.1	| Symbols: | oxidoreductases, acting on NADH or NADPH | chr1:28247854-28249395 FORWARD LENGTH=513	NA	NA	NA	NA	NA	GO:0016651|oxidoreductase activity, acting on NADH or NADPH	GO:0009507|chloroplast
pt2_05302	A	A1S	Potri.002G034800	Potri.002G034800(AS)	POPTR_0002s03620	sp|Q9LEV3|CBSX3_ARATH	CBS domain-containing protein CBSX3, mitochondrial OS=Arabidopsis thaliana GN=CBSX3 PE=1 SV=1	AT1G47271.1	| Symbols: | Cystathionine beta-synthase (CBS) family protein | chr1:17328856-17330343 FORWARD LENGTH=193	LOC_Os03g52690.5	protein|CBS domain containing membrane protein, putative, expressed	IMGA|Medtr5g076080.3	Cbs domain protein chr5 31412893-31409095 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_05303	A	A1S	Potri.002G034900	Potri.002G034900(AS)	POPTR_0002s03630	sp|Q940Z1|PPR51_ARATH	Pentatricopeptide repeat-containing protein At1g19525 OS=Arabidopsis thaliana GN=At1g19525 PE=2 SV=2	AT1G19520.1	| Symbols: NFD5 | pentatricopeptide (PPR) repeat-containing protein | chr1:6760032-6762581 FORWARD LENGTH=725	LOC_Os02g39820.1	protein|PPR repeat domain containing protein, putative, expressed	IMGA|Medtr5g090210.1	Pentatricopeptide repeat-containing protein chr5 38260030-38262180 E EGN_Mt100125 20111014	GO:0009220|pyrimidine ribonucleotide biosynthetic process	NA	GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_05304	A	A1S	Potri.002G035000	Potri.002G035000(AS)	POPTR_0002s03640	NA	NA	AT1G75250.2	| Symbols: ATRL6, RSM3, RL6 | RAD-like 6 | chr1:28244463-28245453 REVERSE LENGTH=97	LOC_Os05g50340.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr5g020170.1	MYB transcription factor MYB164 chr5 7437642-7437935 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus GO:0009507|chloroplast
pt2_05305	A	A1S	Potri.002G035100	Potri.002G035100(AS)	POPTR_0002s03650	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05306	A	A1S	Potri.002G035200	Potri.002G035200(AS)	POPTR_0002s03660	sp|Q9SB61|Y4466_ARATH	ZF-HD homeobox protein At4g24660 OS=Arabidopsis thaliana GN=At4g24660 PE=1 SV=1	AT1G14440.2	| Symbols: AtHB31, HB31, ZHD4 | homeobox protein 31 | chr1:4939076-4940014 REVERSE LENGTH=312	LOC_Os09g29130.1	protein|ZF-HD protein dimerisation region containing protein, expressed	IMGA|Medtr5g020510.1	Zinc finger-homeodomain protein chr5 7579898-7580779 H EGN_Mt100125 20111014	GO:0009737|response to abscisic acid stimulus GO:0010103|stomatal complex morphogenesis GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_05307	B	B1A	Potri.002G035300	Potri.002G035300(BA)	POPTR_0002s03670	sp|Q92383|MAG1_SCHPO	DNA-3-methyladenine glycosylase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mag1 PE=1 SV=1	AT1G19480.1	| Symbols: | DNA glycosylase superfamily protein | chr1:6744520-6746144 FORWARD LENGTH=382	LOC_Os05g50290.1	protein|hhH-GPD superfamily base excision DNA repair protein, putative, expressed	IMGA|Medtr5g020300.1	DNA-3-methyladenine glycosylase chr5 7505454-7506312 E EGN_Mt100125 20111014	GO:0006281|DNA repair GO:0006284|base-excision repair	GO:0003824|catalytic activity	GO:0005634|nucleus
pt2_05308	A	A1S	Potri.002G035500	Potri.002G035500(AS)	POPTR_0002s03680	NA	NA	AT2G20430.1	| Symbols: RIC6 | ROP-interactive CRIB motif-containing protein 6 | chr2:8808667-8809781 REVERSE LENGTH=212	LOC_Os02g56580.1	protein|P21-Rho-binding domain containing protein, putative, expressed	IMGA|Medtr1g075690.1	hypothetical protein chr1 19265572-19267260 E EGN_Mt100125 20111014	GO:0009416|response to light stimulus	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_05309	A	A1S	Potri.002G035600	Potri.002G035600(AS)	POPTR_0002s03690	sp|Q80W71|PKHA8_MOUSE	Pleckstrin homology domain-containing family A member 8 OS=Mus musculus GN=Plekha8 PE=2 SV=2	AT2G33470.2	| Symbols: GLTP1 | glycolipid transfer protein 1 | chr2:14176599-14177950 REVERSE LENGTH=202	LOC_Os07g26460.1	protein|GLTP domain containing protein, putative, expressed	NA	NA	GO:0006816|calcium ion transport GO:0007030|Golgi organization GO:0009651|response to salt stress GO:0046836|glycolipid transport	GO:0017089|glycolipid transporter activity GO:0051861|glycolipid binding	GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane
pt2_05310	A	A2S	Potri.002G035700	Potri.002G035700(AS) Potri.005G227300(BS)	POPTR_0002s03700	sp|Q9T043|RL142_ARATH	60S ribosomal protein L14-2 OS=Arabidopsis thaliana GN=RPL14B PE=2 SV=1	AT4G27090.1	| Symbols: | Ribosomal protein L14 | chr4:13594104-13595187 REVERSE LENGTH=134	LOC_Os02g40880.1	protein|ribosomal protein L14, putative, expressed	NA	NA	GO:0001510|RNA methylation GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005730|nucleolus GO:0005737|cytoplasm GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005783|endoplasmic reticulum GO:0005829|cytosol GO:0005840|ribosome GO:0009506|plasmodesma GO:0009507|chloroplast GO:0022625|cytosolic large ribosomal subunit GO:0022626|cytosolic ribosome
pt2_05311	A	A2S	Potri.002G035800	Potri.002G035800(AS) Potri.005G227100(DS)	POPTR_0002s03710	sp|Q06190|P2R3A_HUMAN	Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha OS=Homo sapiens GN=PPP2R3A PE=1 SV=1	AT5G44090.1	| Symbols: | Calcium-binding EF-hand family protein | chr5:17743264-17747909 REVERSE LENGTH=538	LOC_Os10g33680.1	protein|serine/threonine-protein phosphatase 2A regulatory subunit B subunitbeta, putative, expressed	NA	NA	GO:0008150|biological_process GO:0009639|response to red or far red light	GO:0005509|calcium ion binding	GO:0005634|nucleus GO:0005739|mitochondrion
pt2_05312	A	A1S	Potri.002G035900	Potri.002G035900(AS)	POPTR_0002s03720	sp|Q941D5|VPS2C_ARATH	Vacuolar protein sorting-associated protein 2 homolog 3 OS=Arabidopsis thaliana GN=VPS2.3 PE=2 SV=1	AT1G03950.1	| Symbols: VPS2.3 | vacuolar protein sorting-associated protein 2.3 | chr1:1011388-1013212 REVERSE LENGTH=210	LOC_Os10g33660.1	protein|SNF7 domain containing protein, putative, expressed	NA	NA	GO:0015031|protein transport GO:0016192|vesicle-mediated transport	NA	GO:0000815|ESCRT III complex
pt2_05313	A	A1S	Potri.002G036000	Potri.002G036000(AS)	POPTR_0002s03730	sp|P42158|KC1D_ARATH	Casein kinase I isoform delta-like OS=Arabidopsis thaliana GN=At4g26100 PE=2 SV=2	AT4G28540.1	| Symbols: CKL6, PAPK1 | casein kinase I-like 6 | chr4:14107284-14110511 FORWARD LENGTH=479	LOC_Os02g56560.1	protein|CK1_CaseinKinase_1.6 - CK1 includes the casein kinase 1 kinases, expressed	IMGA|Medtr1g042430.1	Casein kinase chr1 12130628-12134366 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0009744|response to sucrose stimulus GO:0009749|response to glucose stimulus GO:0009750|response to fructose stimulus GO:0042732|D-xylose metabolic process GO:0046777|protein autophosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005575|cellular_component GO:0005737|cytoplasm GO:0005856|cytoskeleton GO:0009506|plasmodesma GO:0055028|cortical microtubule
pt2_05314	A	A1S	Potri.002G036100	Potri.002G036100(AS)	POPTR_0002s03740	sp|Q9M384|SCR_ARATH	Protein SCARECROW OS=Arabidopsis thaliana GN=SCR PE=1 SV=1	AT3G54220.1	| Symbols: SCR, SGR1 | GRAS family transcription factor | chr3:20070550-20072625 FORWARD LENGTH=653	LOC_Os11g03110.1	protein|GRAS family transcription factor domain containing protein, expressed	IMGA|contig_52215_1.1	GAI-like protein contig_52215 101-2211 F PREDN 20111014	GO:0009630|gravitropism GO:0009956|radial pattern formation GO:0051457|maintenance of protein location in nucleus	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_05315	A	A1S	Potri.002G036200	Potri.002G036200(AS)	POPTR_0002s03750	sp|Q6TGC6|CBK1_PNECA	Serine/threonine-protein kinase CBK1 OS=Pneumocystis carinii GN=CBK1 PE=2 SV=1	AT2G20470.1	| Symbols: | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein | chr2:8826277-8829497 REVERSE LENGTH=569	LOC_Os05g43570.2	protein|AGC_AGC_other_NDRh_TRCd.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed	IMGA|Medtr5g069000.1	Microtubule-associated serine/threonine-protein kinase chr5 28211794-28220768 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0009827|plant-type cell wall modification	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005737|cytoplasm
pt2_05316	A	A1S	Potri.002G036200	Potri.002G036200(AS)	POPTR_0002s03750	sp|Q6TGC6|CBK1_PNECA	Serine/threonine-protein kinase CBK1 OS=Pneumocystis carinii GN=CBK1 PE=2 SV=1	AT2G20470.1	| Symbols: | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein | chr2:8826277-8829497 REVERSE LENGTH=569	LOC_Os05g43570.2	protein|AGC_AGC_other_NDRh_TRCd.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed	IMGA|Medtr5g069000.1	Microtubule-associated serine/threonine-protein kinase chr5 28211794-28220768 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0009827|plant-type cell wall modification	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005737|cytoplasm
pt2_05317	A	A2S	Potri.002G036300	Potri.002G036300(AS) Potri.005G226600(DS)	POPTR_0002s03760	sp|Q3EDJ0|AB19I_ARATH	ABC transporter I family member 19 OS=Arabidopsis thaliana GN=ABCI19 PE=2 SV=1	AT1G03905.1	| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:993478-995594 FORWARD LENGTH=290	LOC_Os02g56550.1	protein|ABC transporter, ATP-binding protein, putative, expressed	NA	NA	NA	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity	GO:0005886|plasma membrane
pt2_05318	A	A1S	Potri.002G036400	Potri.002G036400(AS)	POPTR_0002s03770	sp|Q681Q7|Y1390_ARATH	Uncharacterized protein At1g03900 OS=Arabidopsis thaliana GN=At1g03900 PE=2 SV=1	AT1G03900.1	| Symbols: ATNAP4, NAP4 | non-intrinsic ABC protein 4 | chr1:991252-992852 FORWARD LENGTH=272	LOC_Os10g33630.2	protein|adaptin ear-binding coat-associated protein 2, putative, expressed	NA	NA	GO:0000902|cell morphogenesis GO:0006858|extracellular transport GO:0006897|endocytosis GO:0016049|cell growth GO:0048193|Golgi vesicle transport	GO:0005215|transporter activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0005737|cytoplasm
pt2_05319	A	A1S	Potri.002G036500	Potri.002G036500(AS)	POPTR_0002s03780	sp|Q93XX8|NOP10_ARATH	H/ACA ribonucleoprotein complex subunit 3-like protein OS=Arabidopsis thaliana GN=At2g20490 PE=2 SV=2	AT2G20490.1	| Symbols: NOP10, EDA27 | nucleolar RNA-binding Nop10p family protein | chr2:8831897-8832723 FORWARD LENGTH=64	LOC_Os02g40514.1	protein|h/ACA ribonucleoprotein complex subunit 3, putative, expressed	NA	NA	GO:0001510|RNA methylation GO:0006364|rRNA processing GO:0010197|polar nucleus fusion	GO:0003723|RNA binding	GO:0005634|nucleus GO:0005730|nucleolus GO:0015030|Cajal body
pt2_05320	A	A1S	Potri.002G036600	Potri.002G036600(AS)	POPTR_0002s03790	sp|P04844|RPN2_HUMAN	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Homo sapiens GN=RPN2 PE=1 SV=3	AT4G21150.3	| Symbols: HAP6 | ribophorin II (RPN2) family protein | chr4:11278646-11283599 FORWARD LENGTH=691	LOC_Os01g68324.3	protein|dolichyl-diphosphooligosaccharide--protein glycosyltransferase 63 kDasubunit precursor, putative, expressed	NA	NA	GO:0006364|rRNA processing GO:0009409|response to cold GO:0018279|protein N-linked glycosylation via asparagine GO:0030244|cellulose biosynthetic process	GO:0004579|dolichyl-diphosphooligosaccharide-protein glycotransferase activity	GO:0005739|mitochondrion GO:0005774|vacuolar membrane GO:0005783|endoplasmic reticulum GO:0005789|endoplasmic reticulum membrane GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0008250|oligosaccharyltransferase complex GO:0009505|plant-type cell wall GO:0009506|plasmodesma GO:0016020|membrane
pt2_05321	A	A1S	Potri.002G036700	Potri.002G036700(AS)	POPTR_0002s03800	sp|Q940J9|PMT8_ARATH	Probable methyltransferase PMT8 OS=Arabidopsis thaliana GN=At1g04430 PE=1 SV=1	AT1G04430.2	| Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr1:1198860-1201301 FORWARD LENGTH=623	LOC_Os10g33720.3	protein|methyltransferase, putative, expressed	IMGA|Medtr1g075900.1	Methyltransferase chr1 19382853-19380393 E EGN_Mt100125 20111014	NA	GO:0008168|methyltransferase activity	GO:0005634|nucleus GO:0005768|endosome GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_05322	A	A1S	Potri.002G036800	Potri.002G036800(AS)	POPTR_0002s03810	sp|Q940J9|PMT8_ARATH	Probable methyltransferase PMT8 OS=Arabidopsis thaliana GN=At1g04430 PE=1 SV=1	AT1G04430.2	| Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr1:1198860-1201301 FORWARD LENGTH=623	LOC_Os10g33720.3	protein|methyltransferase, putative, expressed	IMGA|Medtr1g075900.1	Methyltransferase chr1 19382853-19380393 E EGN_Mt100125 20111014	GO:0000271|polysaccharide biosynthetic process GO:0009825|multidimensional cell growth GO:0009932|cell tip growth GO:0010817|regulation of hormone levels GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0048767|root hair elongation GO:0071555|cell wall organization	GO:0008168|methyltransferase activity	GO:0005768|endosome GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_05323	C	C1A	Potri.002G036900	Potri.002G036900(CA)	NA	NA	AT2G20495.2	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Serine-threonine protein kinase 19 (InterPro:IPR018865); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr2:8833180-8835034 FORWARD LENGTH=255	LOC_Os07g27460.1	protein|serine/threonine-protein kinase 19, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05324	A	A1S	Potri.002G037100	Potri.002G037100(AS)	POPTR_0002s03830	sp|Q84TE6|NAC22_ARATH	NAC domain-containing protein 21/22 OS=Arabidopsis thaliana GN=NAC021 PE=1 SV=2	AT4G28530.1	| Symbols: anac074, NAC074 | NAC domain containing protein 74 | chr4:14090725-14094603 REVERSE LENGTH=352	LOC_Os04g43560.1	protein|no apical meristem protein, putative, expressed	IMGA|contig_11212_1.1	NAC domain protein contig_11212 281-2118 H PREDN 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0007275|multicellular organismal development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05325	A	A1S	Potri.002G037300	Potri.002G037300(AS)	POPTR_0002s03840	sp|Q8GUI6|JMJ14_ARATH	Probable lysine-specific demethylase JMJ14 OS=Arabidopsis thaliana GN=JMJ14 PE=1 SV=1	AT1G08620.2	| Symbols: PKDM7D | Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein | chr1:2737554-2743370 FORWARD LENGTH=1209	LOC_Os05g10770.1	protein|transcription factor jumonji, putative, expressed	IMGA|Medtr5g010300.1	Lysine-specific demethylase 5D chr5 2474270-2496453 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006486|protein glycosylation GO:0009630|gravitropism GO:0010228|vegetative to reproductive phase transition of meristem GO:0010413|glucuronoxylan metabolic process GO:0016926|protein desumoylation GO:0043687|post-translational protein modification GO:0045492|xylan biosynthetic process GO:0045893|positive regulation of transcription, DNA-dependent GO:0050665|hydrogen peroxide biosynthetic process	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_05326	A	A1S	Potri.002G037400	Potri.002G037400(AS)	POPTR_0002s03850	sp|Q9M1T1|SETH3_ARATH	Probable arabinose 5-phosphate isomerase OS=Arabidopsis thaliana GN=SETH3 PE=2 SV=1	AT3G54690.1	| Symbols: | Sugar isomerase (SIS) family protein | chr3:20246586-20247810 FORWARD LENGTH=350	LOC_Os02g06360.1	protein|uncharacterized protein CPn_0526/CP_0226/CPj0526/CpB0547, putative, expressed	NA	NA	GO:0005975|carbohydrate metabolic process GO:0019243|methylglyoxal catabolic process to D-lactate	GO:0016853|isomerase activity GO:0030246|carbohydrate binding	NA
pt2_05327	A	A1S	Potri.002G037500	Potri.002G037500(AS)	POPTR_0002s03860	NA	NA	AT2G31160.1	| Symbols: LSH3 | Protein of unknown function (DUF640) | chr2:13277903-13278562 FORWARD LENGTH=219	LOC_Os02g56610.1	protein|DUF640 domain containing protein, putative, expressed	IMGA|Medtr1g080210.1	hypothetical protein chr1 20139904-20141484 E EGN_Mt100125 20111014	GO:0007389|pattern specification process GO:0008150|biological_process GO:0009855|determination of bilateral symmetry GO:0009944|polarity specification of adaxial/abaxial axis GO:0010014|meristem initiation GO:0010075|regulation of meristem growth GO:0048438|floral whorl development GO:0048439|flower morphogenesis	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_05328	A	A1S	Potri.002G037700	Potri.002G037700(AS)	POPTR_0002s03870	sp|Q8GWV5|PUB3_ARATH	U-box domain-containing protein 3 OS=Arabidopsis thaliana GN=PUB3 PE=2 SV=2	AT3G54790.1	| Symbols: | ARM repeat superfamily protein | chr3:20281830-20284363 REVERSE LENGTH=760	LOC_Os08g01900.1	protein|armadillo/beta-catenin repeat family protein, putative, expressed	IMGA|contig_49679_2.1	U-box domain-containing protein contig_49679 4807-2474 E PREDN 20111014	GO:0016567|protein ubiquitination	GO:0004842|ubiquitin-protein ligase activity GO:0019894|kinesin binding	GO:0000151|ubiquitin ligase complex GO:0005871|kinesin complex
pt2_05329	C	C1S	Potri.002G037700	Potri.002G037700(CS)	sp|Q8GWV5|PUB3_ARATH	U-box domain-containing protein 3 OS=Arabidopsis thaliana GN=PUB3 PE=2 SV=2	AT3G54790.1	| Symbols: | ARM repeat superfamily protein | chr3:20281830-20284363 REVERSE LENGTH=760	LOC_Os08g01900.1	protein|armadillo/beta-catenin repeat family protein, putative, expressed	IMGA|contig_49679_2.1	U-box domain-containing protein contig_49679 4807-2474 E PREDN 20111014	GO:0016567|protein ubiquitination	GO:0004842|ubiquitin-protein ligase activity GO:0019894|kinesin binding	GO:0000151|ubiquitin ligase complex GO:0005871|kinesin complex
pt2_05330	A	A1S	Potri.002G037800	Potri.002G037800(AS)	POPTR_0002s03890	sp|Q8L4E7|BP73_ORYSJ	SAP-like protein BP-73 OS=Oryza sativa subsp. japonica GN=BP-73 PE=1 SV=1	AT1G06190.2	| Symbols: | Rho termination factor | chr1:1892589-1894078 REVERSE LENGTH=292	LOC_Os03g08480.2	protein|rho termination factor, N-terminal domain containing protein, expressed	NA	NA	GO:0009737|response to abscisic acid stimulus GO:0009793|embryo development ending in seed dormancy GO:0010239|chloroplast mRNA processing GO:0016226|iron-sulfur cluster assembly GO:0042793|transcription from plastid promoter GO:0045893|positive regulation of transcription, DNA-dependent GO:1901259|chloroplast rRNA processing	GO:0005515|protein binding GO:0019843|rRNA binding GO:0043621|protein self-association	GO:0005634|nucleus GO:0009507|chloroplast
pt2_05331	A	A2S	Potri.002G037900	Potri.002G037900(AS) Potri.005G225100(DS)	POPTR_0002s03900	NA	NA	AT1G06200.1	| Symbols: | Peptidase S24/S26A/S26B/S26C family protein | chr1:1894604-1896852 REVERSE LENGTH=206	LOC_Os04g01240.1	protein|serine-type peptidase, putative, expressed	NA	NA	GO:0006508|proteolysis GO:0008150|biological_process	GO:0003674|molecular_function GO:0008236|serine-type peptidase activity	GO:0005575|cellular_component GO:0005739|mitochondrion GO:0005774|vacuolar membrane GO:0016020|membrane
pt2_05332	A	A1S	Potri.002G037900	Potri.002G037900(AS)	POPTR_0002s03900	NA	NA	AT1G06200.1	| Symbols: | Peptidase S24/S26A/S26B/S26C family protein | chr1:1894604-1896852 REVERSE LENGTH=206	LOC_Os04g01240.1	protein|serine-type peptidase, putative, expressed	NA	NA	GO:0006508|proteolysis GO:0008150|biological_process	GO:0003674|molecular_function GO:0008236|serine-type peptidase activity	GO:0005575|cellular_component GO:0005739|mitochondrion GO:0005774|vacuolar membrane GO:0016020|membrane
pt2_05333	A	A1S	Potri.002G038000	Potri.002G038000(AS)	POPTR_0002s03910	sp|Q54GH3|TOM1_DICDI	Target of Myb protein 1 OS=Dictyostelium discoideum GN=tom1 PE=1 SV=1	AT1G06210.1	| Symbols: | ENTH/VHS/GAT family protein | chr1:1897567-1898986 FORWARD LENGTH=383	LOC_Os10g42724.1	protein|VHS and GAT domain containing protein, expressed	IMGA|Medtr5g007480.1	Hepatocyte growth factor-regulated tyrosine kinase substrate chr5 1139730-1135656 F EGN_Mt100125 20111014	GO:0006886|intracellular protein transport GO:0006891|intra-Golgi vesicle-mediated transport	GO:0008565|protein transporter activity	GO:0005622|intracellular GO:0005634|nucleus GO:0005795|Golgi stack
pt2_05334	A	A1S	Potri.002G038100	Potri.002G038100(AS)	POPTR_0002s03920	sp|P09802|LEGA_GOSHI	Legumin A OS=Gossypium hirsutum GN=LEGA PE=2 SV=2	AT5G44120.3	| Symbols: CRA1, ATCRA1, CRU1 | RmlC-like cupins superfamily protein | chr5:17756460-17758246 REVERSE LENGTH=472	LOC_Os10g26060.1	protein|glutelin, putative, expressed	IMGA|Medtr1g072630.3	Legumin chr1 18241732-18234911 F EGN_Mt100125 20111014	GO:0009737|response to abscisic acid stimulus GO:0010162|seed dormancy process GO:0010431|seed maturation GO:0071215|cellular response to abscisic acid stimulus	GO:0045735|nutrient reservoir activity	GO:0005634|nucleus
pt2_05335	A	A1S	Potri.002G038200	Potri.002G038200(AS)	POPTR_0002s03930	NA	NA	AT2G20515.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; Has 71 Blast hits to 71 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:8839041-8839595 REVERSE LENGTH=155	LOC_Os04g43670.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_05336	A	A1S	Potri.002G038300	Potri.002G038300(AS)	POPTR_0002s03940	sp|O43615|TIM44_HUMAN	Mitochondrial import inner membrane translocase subunit TIM44 OS=Homo sapiens GN=TIMM44 PE=1 SV=2	AT2G36070.1	| Symbols: ATTIM44-2, TIM44-2 | translocase inner membrane subunit 44-2 | chr2:15145119-15147895 REVERSE LENGTH=469	LOC_Os07g22700.1	protein|tim44-like domain containing protein, expressed	IMGA|contig_53399_1.1	Mitochondrial import inner membrane translocase subunit TIM44 contig_53399 456-1854 H PREDN 20111014	GO:0006626|protein targeting to mitochondrion GO:0006886|intracellular protein transport	GO:0015450|P-P-bond-hydrolysis-driven protein transmembrane transporter activity GO:0015462|protein-transmembrane transporting ATPase activity	GO:0005622|intracellular GO:0005739|mitochondrion GO:0005743|mitochondrial inner membrane GO:0005744|mitochondrial inner membrane presequence translocase complex
pt2_05337	A	A1S	Potri.002G038400	Potri.002G038400(AS)	POPTR_0002s03950	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_05338	A	A1S	Potri.002G038500	Potri.002G038500(AS)	POPTR_0002s03960	sp|Q7XBH4|MYB4_ORYSJ	Myb-related protein Myb4 OS=Oryza sativa subsp. japonica GN=MYB4 PE=2 SV=2	AT2G31180.1	| Symbols: ATMYB14, MYB14AT, MYB14 | myb domain protein 14 | chr2:13286806-13288175 REVERSE LENGTH=249	LOC_Os04g43680.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr5g007370.1	Myb-like transcription factor chr5 1082481-1079977 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009651|response to salt stress GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009751|response to salicylic acid stimulus GO:0009753|response to jasmonic acid stimulus	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_05339	A	A1S	Potri.002G038600	Potri.002G038600(AS)	POPTR_0002s03970	sp|Q499P8|CP058_RAT	UPF0420 protein C16orf58 homolog OS=Rattus norvegicus PE=2 SV=1	AT2G31190.1	| Symbols: RUS2, WXR1 | Protein of unknown function, DUF647 | chr2:13291458-13293681 REVERSE LENGTH=433	LOC_Os04g43690.1	protein|DUF647 domain containing protein, putative, expressed	IMGA|Medtr5g025160.1	hypothetical protein chr5 9942962-9949542 E EGN_Mt100125 20111014	GO:0009926|auxin polar transport GO:0010224|response to UV-B	NA	GO:0005739|mitochondrion GO:0009536|plastid GO:0009941|chloroplast envelope
pt2_05340	A	A2S	Potri.002G038700	Potri.002G038700(AS) Potri.005G223900(BS)	POPTR_0002s03980	sp|Q52KD8|EAF6_XENLA	Chromatin modification-related protein MEAF6 OS=Xenopus laevis GN=meaf6 PE=2 SV=1	AT4G14385.1	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone H4 acetyltransferase, NuA4 complex, Eaf6 (InterPro:IPR015418); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:8287144-8288622 REVERSE LENGTH=163	LOC_Os12g20310.1	protein|sarcoma antigen NY-SAR-91, putative, expressed	IMGA|contig_54061_1.1	Chromatin modification-related protein MEAF6 contig_54061 374-1963 F PREDN 20111014	GO:0008150|biological_process GO:0048573|photoperiodism, flowering	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005773|vacuole
pt2_05341	A	A1S	Potri.002G038800	Potri.002G038800(AS)	POPTR_0002s03990	sp|Q8SAG3|ADF_VITVI	Actin-depolymerizing factor OS=Vitis vinifera PE=2 SV=1	AT2G31200.1	| Symbols: ADF6, ATADF6 | actin depolymerizing factor 6 | chr2:13294171-13294948 FORWARD LENGTH=146	LOC_Os12g43340.1	protein|actin-depolymerizing factor, putative, expressed	IMGA|Medtr5g010430.1	Actin depolymerizing factor chr5 2553660-2554177 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003779|actin binding	GO:0005622|intracellular GO:0005737|cytoplasm
pt2_05342	A	A1S	Potri.002G038900	Potri.002G038900(AS)	POPTR_0002s04000	sp|Q494P0|PHT17_ARATH	Probable inorganic phosphate transporter 1-7 OS=Arabidopsis thaliana GN=PHT1-7 PE=2 SV=2	AT3G54700.1	| Symbols: PHT1;7 | phosphate transporter 1;7 | chr3:20248463-20250070 REVERSE LENGTH=535	LOC_Os08g45000.1	protein|inorganic phosphate transporter, putative, expressed	IMGA|Medtr1g043290.1	Inorganic phosphate transporter 1-1 chr1 12497182-12501214 E EGN_Mt100125 20111014	GO:0006817|phosphate ion transport GO:0006857|oligopeptide transport GO:0009737|response to abscisic acid stimulus GO:0055085|transmembrane transport	GO:0005315|inorganic phosphate transmembrane transporter activity GO:0005351|sugar:hydrogen symporter activity GO:0015114|phosphate ion transmembrane transporter activity GO:0015144|carbohydrate transmembrane transporter activity GO:0022857|transmembrane transporter activity	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005773|vacuole GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane GO:0016021|integral to membrane
pt2_05343	A	A1S	Potri.002G039000	Potri.002G039000(AS)	POPTR_0002s04010	sp|Q8LDC8|ERF92_ARATH	Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana GN=ERF1B PE=1 SV=2	AT3G23240.1	| Symbols: ERF1, ATERF1 | ethylene response factor 1 | chr3:8295705-8296361 FORWARD LENGTH=218	LOC_Os03g64260.1	protein|AP2 domain containing protein, expressed	IMGA|AC233556_27.1	Ethylene-responsive transcription factor AC233556.3 105457-106057 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006952|defense response GO:0009867|jasmonic acid mediated signaling pathway GO:0009873|ethylene mediated signaling pathway	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_05344	A	A1S	Potri.002G039100	Potri.002G039100(AS)	POPTR_0002s04020	sp|Q8LDC8|ERF92_ARATH	Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana GN=ERF1B PE=1 SV=2	AT3G23240.1	| Symbols: ERF1, ATERF1 | ethylene response factor 1 | chr3:8295705-8296361 FORWARD LENGTH=218	LOC_Os03g64260.1	protein|AP2 domain containing protein, expressed	IMGA|AC233556_27.1	Ethylene-responsive transcription factor AC233556.3 105457-106057 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006952|defense response GO:0009867|jasmonic acid mediated signaling pathway GO:0009873|ethylene mediated signaling pathway	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_05345	B	B1S	Potri.002G039200	Potri.002G039200(BS)	POPTR_0002s04030	sp|Q9LTC5|ERF98_ARATH	Ethylene-responsive transcription factor ERF098 OS=Arabidopsis thaliana GN=ERF098 PE=1 SV=1	AT3G23230.1	| Symbols: | Integrase-type DNA-binding superfamily protein | chr3:8289647-8290066 REVERSE LENGTH=139	LOC_Os04g18650.1	protein|AP2 domain containing protein, expressed	IMGA|contig_52379_1.1	Ethylene-responsive transcription factor 1A contig_52379 285-752 E PREDN 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009873|ethylene mediated signaling pathway GO:0010200|response to chitin	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_05346	R	R	NA	NA	POPTR_0002s04040	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05347	A	A1S	Potri.002G039400	Potri.002G039400(AS)	POPTR_0002s04050	sp|Q8S2T1|DDPS6_ARATH	Dehydrodolichyl diphosphate synthase 6 OS=Arabidopsis thaliana GN=At2g17570 PE=2 SV=2	AT2G17570.1	| Symbols: | Undecaprenyl pyrophosphate synthetase family protein | chr2:7645086-7645973 FORWARD LENGTH=295	LOC_Os06g07120.1	protein|dehydrodolichyl diphosphate synthase, putative, expressed	IMGA|Medtr1g095500.1	Undecaprenyl pyrophosphate synthetase chr1 27350698-27358291 H EGN_Mt100125 20111014	NA	GO:0016765|transferase activity, transferring alkyl or aryl (other than methyl) groups	NA
pt2_05348	A	A1S	Potri.002G039500	Potri.002G039500(AS)	POPTR_0002s04060	sp|P24397|HY6H_HYONI	Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H6H PE=1 SV=1	AT4G10500.1	| Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr4:6491089-6492342 FORWARD LENGTH=349	LOC_Os07g07410.2	protein|oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed	IMGA|Medtr5g032880.1	Flavonol synthase/flavanone 3-hydroxylase chr5 13751716-13747860 E EGN_Mt100125 20111014	GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process GO:0019748|secondary metabolic process GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	NA
pt2_05349	A	A2S	Potri.002G039600	Potri.002G039600(AS) Potri.002G039500(BS)	POPTR_0002s04070	sp|P24397|HY6H_HYONI	Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H6H PE=1 SV=1	AT4G10500.1	| Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr4:6491089-6492342 FORWARD LENGTH=349	LOC_Os04g49194.1	protein|naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed	IMGA|Medtr5g032870.1	1-aminocyclopropane-1-carboxylate oxidase chr5 13746625-13744119 F EGN_Mt100125 20111014	GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process GO:0019748|secondary metabolic process GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	NA
pt2_05350	A	A1S	Potri.002G039700	Potri.002G039700(AS)	POPTR_0002s04080	sp|Q9LSW9|ATL16_ARATH	RING-H2 finger protein ATL16 OS=Arabidopsis thaliana GN=ATL16 PE=2 SV=1	AT5G43420.1	| Symbols: | RING/U-box superfamily protein | chr5:17451790-17452917 FORWARD LENGTH=375	LOC_Os02g57460.1	protein|RING-H2 finger protein ATL5G, putative, expressed	IMGA|Medtr1g043410.1	RING finger protein chr1 12570584-12571549 H EGN_Mt100125 20111014	NA	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_05351	C	C1S	Potri.002G039800	Potri.002G039800(CS)	NA	NA	AT2G31240.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr2:13317570-13319518 REVERSE LENGTH=617	LOC_Os02g57470.1	protein|tetratricopeptide repeat containing protein, putative, expressed	NA	NA	GO:0006457|protein folding GO:0008150|biological_process GO:0009220|pyrimidine ribonucleotide biosynthetic process GO:0009408|response to heat GO:0009644|response to high light intensity GO:0034976|response to endoplasmic reticulum stress GO:0042542|response to hydrogen peroxide	NA	GO:0009507|chloroplast
pt2_05352	A	A1S	Potri.002G039900	Potri.002G039900(AS)	POPTR_0002s04100	sp|Q54NA3|ATG9_DICDI	Autophagy-related protein 9 OS=Dictyostelium discoideum GN=atg9 PE=3 SV=1	AT2G31260.1	| Symbols: APG9, ATAPG9 | autophagy 9 (APG9) | chr2:13322291-13326293 REVERSE LENGTH=866	LOC_Os03g14380.1	protein|autophagy protein 9, putative, expressed	NA	NA	GO:0006635|fatty acid beta-oxidation GO:0006914|autophagy GO:0009407|toxin catabolic process GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	NA	GO:0005634|nucleus
pt2_05353	C	C1A	Potri.002G039900	Potri.002G039900(CA)	sp|Q54NA3|ATG9_DICDI	Autophagy-related protein 9 OS=Dictyostelium discoideum GN=atg9 PE=3 SV=1	AT2G31260.1	| Symbols: APG9, ATAPG9 | autophagy 9 (APG9) | chr2:13322291-13326293 REVERSE LENGTH=866	LOC_Os03g14380.1	protein|autophagy protein 9, putative, expressed	NA	NA	GO:0006635|fatty acid beta-oxidation GO:0006914|autophagy GO:0009407|toxin catabolic process GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	NA	GO:0005634|nucleus
pt2_05354	A	A1S	Potri.002G040100	Potri.002G040100(AS)	POPTR_0002s04120	sp|Q9SJW9|CDT1A_ARATH	CDT1-like protein a, chloroplastic OS=Arabidopsis thaliana GN=CDT1A PE=1 SV=1	AT2G31270.1	| Symbols: ATCDT1A, CDT1A, CDT1 | homolog of yeast CDT1 A | chr2:13329037-13331544 FORWARD LENGTH=571	LOC_Os04g10650.1	protein|CDT1A - Putative DNA replication initiation protein, expressed	NA	NA	GO:0006084|acetyl-CoA metabolic process GO:0006260|DNA replication GO:0006261|DNA-dependent DNA replication GO:0006270|DNA replication initiation GO:0006275|regulation of DNA replication GO:0006342|chromatin silencing GO:0009658|chloroplast organization GO:0009909|regulation of flower development GO:0010389|regulation of G2/M transition of mitotic cell cycle GO:0016458|gene silencing GO:0016572|histone phosphorylation GO:0034968|histone lysine methylation GO:0048229|gametophyte development GO:0051276|chromosome organization GO:0051567|histone H3-K9 methylation GO:0051726|regulation of cell cycle	GO:0004693|cyclin-dependent protein kinase activity GO:0005515|protein binding GO:0019901|protein kinase binding GO:0070182|DNA polymerase binding	GO:0005634|nucleus GO:0009507|chloroplast
pt2_05355	C	C1S	Potri.002G040200	Potri.002G040200(CS)	sp|Q6J163|5NG4_PINTA	Auxin-induced protein 5NG4 OS=Pinus taeda PE=2 SV=1	AT1G44800.1	| Symbols: | nodulin MtN21 /EamA-like transporter family protein | chr1:16914342-16916858 REVERSE LENGTH=370	LOC_Os03g05530.1	protein|nodulin, putative, expressed	IMGA|Medtr5g021160.1	Auxin-induced protein 5NG4 chr5 7866846-7869645 E EGN_Mt100125 20111014	GO:0006865|amino acid transport GO:0032973|amino acid export GO:0043090|amino acid import GO:0080144|amino acid homeostasis	GO:0005515|protein binding GO:0015171|amino acid transmembrane transporter activity GO:0034639|L-amino acid efflux transmembrane transporter activity	GO:0005739|mitochondrion GO:0005886|plasma membrane GO:0016020|membrane
pt2_05356	A	A1S	Potri.002G040300	Potri.002G040300(AS)	POPTR_0002s04140	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05357	G	G1	NA	NA	POPTR_0002s04150	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05358	A	A1S	Potri.002G040500	Potri.002G040500(AS)	POPTR_0002s04155	NA	NA	NA	NA	LOC_Os07g07410.2	protein|oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed	NA	NA	GO:0019748|secondary metabolic process GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_05359	A	A2S	Potri.002G040600	Potri.002G040600(AS) Potri.005G222500(DS)	POPTR_0002s04160	sp|Q58G01|LHWL3_ARATH	Transcription factor bHLH155 OS=Arabidopsis thaliana GN=BHLH155 PE=2 SV=1	AT2G31280.2	| Symbols: CPUORF7 | conserved peptide upstream open reading frame 7 | chr2:13339430-13343309 FORWARD LENGTH=723	LOC_Os01g64560.1	protein|helix-loop-helix DNA-binding protein, putative, expressed	IMGA|Medtr5g034840.1	"Basic helix-loop-helix protein, putative" chr5 14711620-14709328 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus GO:0005739|mitochondrion
pt2_05360	A	A1S	Potri.002G040700	Potri.002G040700(AS)	POPTR_0002s04170	sp|Q84MB3|ACCH1_ARATH	1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1	AT1G06620.1	| Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr1:2025618-2027094 FORWARD LENGTH=365	LOC_Os03g48430.1	protein|1-aminocyclopropane-1-carboxylate oxidase homolog 4, putative, expressed	IMGA|Medtr1g093110.1	1-aminocyclopropane-1-carboxylate oxidase-like protein chr1 26140889-26142774 H EGN_Mt100125 20111014	GO:0008150|biological_process GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	GO:0005737|cytoplasm
pt2_05361	A	A2S	Potri.002G040800	Potri.002G040800(AS) Potri.002G040900(AS)	POPTR_0002s04180	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05362	C	C1S	Potri.002G041000	Potri.002G041000(CS)	NA	NA	AT2G42450.1	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr2:17672425-17674854 REVERSE LENGTH=546	LOC_Os09g39790.1	protein|lipase, putative, expressed	NA	NA	GO:0006629|lipid metabolic process	GO:0004806|triglyceride lipase activity	GO:0005886|plasma membrane
pt2_05363	A	A1S	Potri.002G041100	Potri.002G041100(AS)	POPTR_0002s04200	sp|Q9SLB6|LBD17_ARATH	LOB domain-containing protein 17 OS=Arabidopsis thaliana GN=LBD17 PE=2 SV=1	AT2G42440.1	| Symbols: | Lateral organ boundaries (LOB) domain family protein | chr2:17668888-17669750 REVERSE LENGTH=244	LOC_Os08g44940.1	protein|DUF260 domain containing protein, putative, expressed	IMGA|contig_89471_1.1	LOB domain protein-like protein contig_89471 1967-3043 H PREDN 20111014	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05364	A	A1S	Potri.002G041200	Potri.002G041200(AS)	POPTR_0002s04210	sp|Q9SLB7|LBD16_ARATH	LOB domain-containing protein 16 OS=Arabidopsis thaliana GN=LBD16 PE=2 SV=1	AT2G42430.1	| Symbols: LBD16, ASL18 | lateral organ boundaries-domain 16 | chr2:17663668-17665153 FORWARD LENGTH=245	LOC_Os08g44940.1	protein|DUF260 domain containing protein, putative, expressed	IMGA|contig_89471_1.1	LOB domain protein-like protein contig_89471 1967-3043 H PREDN 20111014	GO:0010311|lateral root formation	NA	GO:0005634|nucleus
pt2_05365	A	A1S	Potri.002G041300	Potri.002G041300(AS)	POPTR_0002s04220	sp|Q9ZP54|PARP1_ARATH	Poly [ADP-ribose] polymerase 1 OS=Arabidopsis thaliana GN=PARP1 PE=1 SV=2	AT2G31320.1	| Symbols: PARP2, ATPARP2 | poly(ADP-ribose) polymerase 2 | chr2:13354046-13359578 REVERSE LENGTH=983	LOC_Os07g23110.1	protein|poly synthetase 1, putative, expressed	NA	NA	GO:0000226|microtubule cytoskeleton organization GO:0000724|double-strand break repair via homologous recombination GO:0006261|DNA-dependent DNA replication GO:0006275|regulation of DNA replication GO:0006281|DNA repair GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0006346|methylation-dependent chromatin silencing GO:0006355|regulation of transcription, DNA-dependent GO:0006471|protein ADP-ribosylation GO:0006979|response to oxidative stress GO:0007067|mitosis GO:0007129|synapsis GO:0007131|reciprocal meiotic recombination GO:0007267|cell-cell signaling GO:0009555|pollen development GO:0009616|virus induced gene silencing GO:0009628|response to abiotic stimulus GO:0009737|response to abscisic acid stimulus GO:0009855|determination of bilateral symmetry GO:0009909|regulation of flower development GO:0010014|meristem initiation GO:0010073|meristem maintenance GO:0010212|response to ionizing radiation GO:0010267|production of ta-siRNAs involved in RNA interference GO:0010564|regulation of cell cycle process GO:0016246|RNA interference GO:0016444|somatic cell DNA recombination GO:0016568|chromatin modification GO:0016570|histone modification GO:0031047|gene silencing by RNA GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0043687|post-translational protein modification GO:0045893|positive regulation of transcription, DNA-dependent GO:0048449|floral organ formation GO:0051567|histone H3-K9 methylation GO:0051726|regulation of cell cycle	GO:0003677|DNA binding GO:0003950|NAD+ ADP-ribosyltransferase activity GO:0008270|zinc ion binding GO:0051287|NAD binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_05366	A	A1S	Potri.002G041400	Potri.002G041400(AS)	POPTR_0002s04230	sp|Q94JW0|DOHH_ARATH	Deoxyhypusine hydroxylase OS=Arabidopsis thaliana GN=At3g58180 PE=2 SV=1	AT3G58180.1	| Symbols: | ARM repeat superfamily protein | chr3:21544189-21545981 FORWARD LENGTH=314	LOC_Os12g43100.1	protein|deoxyhypusine hydroxylase, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0016829|lyase activity	GO:0005829|cytosol GO:0030089|phycobilisome
pt2_05367	A	A2S	Potri.002G041500	Potri.002G041500(AS) Potri.005G221600(DS)	POPTR_0002s04240	sp|Q9M2J9|BET11_ARATH	Bet1-like SNARE 1-1 OS=Arabidopsis thaliana GN=BET11 PE=1 SV=1	AT3G58170.1	| Symbols: ATBS14A, ATBET11, BET11, BS14A | BET1P/SFT1P-like protein 14A | chr3:21542632-21543775 REVERSE LENGTH=122	LOC_Os02g57510.1	protein|SNARE domain containing protein, putative, expressed	NA	NA	GO:0006888|ER to Golgi vesicle-mediated transport GO:0006944|cellular membrane fusion GO:0016192|vesicle-mediated transport	GO:0005484|SNAP receptor activity GO:0008565|protein transporter activity	GO:0005634|nucleus GO:0005794|Golgi apparatus GO:0005886|plasma membrane
pt2_05368	A	A2S	Potri.002G041600	Potri.002G041600(AS) Potri.005G221500(DS)	POPTR_0002s04250	NA	NA	AT5G43540.1	| Symbols: | C2H2 and C2HC zinc fingers superfamily protein | chr5:17496993-17497406 FORWARD LENGTH=137	LOC_Os05g14130.1	protein|ZOS5-05 - C2H2 zinc finger protein, expressed	IMGA|contig_119095_1.1	SUPERMAN-like zinc finger protein contig_119095 168-665 H PREDN 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006417|regulation of translation GO:0009657|plastid organization GO:0009965|leaf morphogenesis GO:0030154|cell differentiation GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003676|nucleic acid binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_05369	A	A2S	Potri.002G041700	Potri.002G041700(AS) Potri.005G221400(BS)	POPTR_0002s04260	sp|Q38895|SUP_ARATH	Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana GN=SUP PE=1 SV=1	AT2G42410.1	| Symbols: ZFP11, ATZFP11 | zinc finger protein 11 | chr2:17658150-17658794 FORWARD LENGTH=214	LOC_Os07g01180.1	protein|ZOS7-01 - C2H2 zinc finger protein, expressed	IMGA|Medtr5g014400.1	Zinc finger (C2H2 type) containing protein chr5 4573945-4574700 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003676|nucleic acid binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_05370	A	A1S	Potri.002G041800	Potri.002G041800(AS)	POPTR_0002s04270	sp|P54697|MYOJ_DICDI	Myosin-J heavy chain OS=Dictyostelium discoideum GN=myoJ PE=4 SV=2	AT1G08730.1	| Symbols: XIC, ATXIC | Myosin family protein with Dil domain | chr1:2779963-2788325 FORWARD LENGTH=1538	LOC_Os06g29350.1	protein|myosin, putative, expressed	IMGA|contig_50747_1.1	Myosin XI contig_50747 226-12071 H PREDN 20111014	GO:0030036|actin cytoskeleton organization GO:0051645|Golgi localization GO:0051646|mitochondrion localization GO:0060151|peroxisome localization	GO:0003774|motor activity GO:0005524|ATP binding	GO:0005737|cytoplasm GO:0005773|vacuole GO:0016459|myosin complex
pt2_05371	A	A1S	Potri.002G041900	Potri.002G041900(AS)	POPTR_0002s04280	sp|Q0V7S6|FK125_ARATH	F-box/kelch-repeat protein OR23 OS=Arabidopsis thaliana GN=OR23 PE=2 SV=1	AT4G03030.1	| Symbols: | Galactose oxidase/kelch repeat superfamily protein | chr4:1335942-1337270 REVERSE LENGTH=442	LOC_Os02g21110.1	protein|OsFBK6 - F-box domain and kelch repeat containing protein, expressed	IMGA|contig_75942_1.1	F-box/kelch-repeat protein OR23 contig_75942 285-627 H PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_05372	B	B1S	Potri.001G380300	Potri.001G380300(BS)	POPTR_0002s04300	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05373	A	A1S	Potri.002G042000	Potri.002G042000(AS)	POPTR_0002s04310	sp|O23487|BH003_ARATH	Transcription factor bHLH3 OS=Arabidopsis thaliana GN=BHLH3 PE=2 SV=1	AT4G16430.1	| Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr4:9267599-9269002 FORWARD LENGTH=467	LOC_Os01g50940.1	protein|helix-loop-helix DNA-binding domain containing protein, expressed	IMGA|Medtr5g030430.1	BHLH transcription factor chr5 12542132-12544882 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_05374	A	A1S	Potri.002G042100	Potri.002G042100(AS)	POPTR_0002s04320	sp|P98188|C94A2_VICSA	Cytochrome P450 94A2 OS=Vicia sativa GN=CYP94A2 PE=2 SV=1	AT3G48520.1	| Symbols: CYP94B3 | cytochrome P450, family 94, subfamily B, polypeptide 3 | chr3:17975104-17976624 REVERSE LENGTH=506	LOC_Os03g12260.1	protein|cytochrome P450 protein, putative, expressed	IMGA|Medtr5g070010.1	Cytochrome P450 chr5 28679240-28682095 F EGN_Mt100125 20111014	GO:0002213|defense response to insect GO:0009555|pollen development GO:0009611|response to wounding GO:0009620|response to fungus GO:0009694|jasmonic acid metabolic process GO:0009695|jasmonic acid biosynthetic process GO:0009753|response to jasmonic acid stimulus GO:0010154|fruit development GO:0010200|response to chitin GO:0048480|stigma development GO:0048653|anther development GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding GO:0052694|jasmonoyl-isoleucine-12-hydroxylase activity	GO:0005576|extracellular region
pt2_05375	A	A1S	Potri.002G042200	Potri.002G042200(AS)	POPTR_0002s04340	sp|O81117|C94A1_VICSA	Cytochrome P450 94A1 OS=Vicia sativa GN=CYP94A1 PE=2 SV=2	AT5G63450.1	| Symbols: CYP94B1 | cytochrome P450, family 94, subfamily B, polypeptide 1 | chr5:25408987-25410519 REVERSE LENGTH=510	LOC_Os03g12260.1	protein|cytochrome P450 protein, putative, expressed	IMGA|Medtr5g070010.1	Cytochrome P450 chr5 28679240-28682095 F EGN_Mt100125 20111014	GO:0009611|response to wounding GO:0009694|jasmonic acid metabolic process GO:0009753|response to jasmonic acid stimulus GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0009507|chloroplast
pt2_05376	A	A1S	Potri.002G042300	Potri.002G042300(AS)	POPTR_0002s04350	sp|P82381|ICI_LINUS	Proteinase inhibitor OS=Linum usitatissimum PE=1 SV=1	AT2G38870.1	| Symbols: | Serine protease inhibitor, potato inhibitor I-type family protein | chr2:16236546-16237050 REVERSE LENGTH=70	NA	NA	IMGA|Medtr1g075340.1	Inhibitor of trypsin and hageman factor chr1 19085810-19086430 F EGN_Mt100125 20111014	GO:0009611|response to wounding GO:0015824|proline transport GO:0050832|defense response to fungus	GO:0004867|serine-type endopeptidase inhibitor activity	GO:0005576|extracellular region GO:0005618|cell wall
pt2_05377	A	A1S	Potri.002G042400	Potri.002G042400(AS)	POPTR_0002s04355	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05378	A	A1S	Potri.002G042500	Potri.002G042500(AS)	POPTR_0002s04360	NA	NA	AT2G30690.1	| Symbols: | Protein of unknown function, DUF593 | chr2:13076229-13078595 FORWARD LENGTH=760	LOC_Os01g56790.1	protein|expressed protein	IMGA|Medtr5g078300.1	hypothetical protein chr5 32463095-32466791 H EGN_Mt100125 20111014	GO:0008150|biological_process GO:0009827|plant-type cell wall modification GO:0009860|pollen tube growth GO:0048610|cellular process involved in reproduction GO:0048868|pollen tube development	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_05379	A	A2S	Potri.002G042600	Potri.002G042600(AS) Potri.005G220500(DS)	POPTR_0002s04370	sp|Q54F15|NUBPL_DICDI	Iron-sulfur protein NUBPL OS=Dictyostelium discoideum GN=nubpl PE=3 SV=1	AT4G19540.1	| Symbols: INDL | IND1(iron-sulfur protein required for NADH dehydrogenase)-like | chr4:10657517-10659094 FORWARD LENGTH=313	LOC_Os03g42880.1	protein|nucleotide-binding protein-like, putative, expressed	NA	NA	NA	NA	GO:0005739|mitochondrion
pt2_05380	B	B1S	Potri.002G042700	Potri.002G042700(BS)	POPTR_0002s04380	NA	NA	AT1G06730.1	| Symbols: | pfkB-like carbohydrate kinase family protein | chr1:2067633-2070049 FORWARD LENGTH=488	LOC_Os03g06880.1	protein|kinase, pfkB family, putative, expressed	IMGA|Medtr1g101950.1	Fructokinase chr1 30207053-30203840 F EGN_Mt100125 20111014	GO:0019303|D-ribose catabolic process	GO:0016301|kinase activity	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_05381	A	A1S	Potri.002G042800	Potri.002G042800(AS)	POPTR_0002s04385	NA	NA	AT1G64260.1	| Symbols: | MuDR family transposase | chr1:23847756-23849915 FORWARD LENGTH=719	LOC_Os12g40530.1	protein|transposon protein, putative, unclassified, expressed	IMGA|Medtr5g081480.1	hypothetical protein chr5 33887201-33883897 I EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0008270|zinc ion binding	GO:0005575|cellular_component
pt2_05382	A	A1A	Potri.002G042900	Potri.002G042900(AA)	POPTR_0002s04390	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05383	A	A1S	Potri.002G043000	Potri.002G043000(AS)	POPTR_0002s04400	NA	NA	AT2G30630.1	| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr2:13046883-13049106 REVERSE LENGTH=531	LOC_Os05g43300.1	protein|expressed protein	IMGA|Medtr1g075250.1	hypothetical protein chr1 19036639-19030825 E EGN_Mt100125 20111014	GO:0009827|plant-type cell wall modification GO:0009860|pollen tube growth GO:0048610|cellular process involved in reproduction GO:0048868|pollen tube development	GO:0005524|ATP binding GO:0016301|kinase activity	GO:0005634|nucleus
pt2_05384	A	A1S	Potri.002G043100	Potri.002G043100(AS)	POPTR_0002s04410	sp|P08283|H1_PEA	Histone H1 OS=Pisum sativum PE=2 SV=1	AT2G30620.2	| Symbols: | winged-helix DNA-binding transcription factor family protein | chr2:13045360-13046267 FORWARD LENGTH=202	LOC_Os03g58470.1	protein|retrotransposon protein, putative, Ty3-gypsy subclass, expressed	IMGA|Medtr5g021730.1	Histone H1 chr5 8210866-8210299 I EGN_Mt100125 20111014	GO:0006334|nucleosome assembly	GO:0003677|DNA binding	GO:0000786|nucleosome GO:0005634|nucleus GO:0005730|nucleolus GO:0005739|mitochondrion
pt2_05385	A	A2S	Potri.002G043200	Potri.002G043200(AS) Potri.005G219700(DS)	POPTR_0002s04420	sp|P31674|RS15_ORYSJ	40S ribosomal protein S15 OS=Oryza sativa subsp. japonica GN=RPS15 PE=2 SV=2	AT5G09500.1	| Symbols: | Ribosomal protein S19 family protein | chr5:2954044-2954850 REVERSE LENGTH=150	LOC_Os07g08660.1	protein|40S ribosomal protein S15, putative, expressed	NA	NA	GO:0006412|translation	GO:0003723|RNA binding GO:0003735|structural constituent of ribosome	GO:0005737|cytoplasm GO:0005840|ribosome GO:0015935|small ribosomal subunit GO:0022627|cytosolic small ribosomal subunit
pt2_05386	A	A1S	Potri.002G043300	Potri.002G043300(AS)	POPTR_0002s04430	sp|Q9FE67|ERF80_ARATH	Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana GN=ERF9 PE=2 SV=1	AT5G44210.1	| Symbols: ERF9, ATERF9, ATERF-9 | erf domain protein 9 | chr5:17806742-17807344 FORWARD LENGTH=200	LOC_Os05g41760.1	protein|AP2 domain containing protein, expressed	IMGA|Medtr5g085070.1	Ethylene responsive transcription factor chr5 35698759-35697527 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006857|oligopeptide transport GO:0009873|ethylene mediated signaling pathway GO:0045892|negative regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus GO:0016020|membrane
pt2_05387	A	A1S	Potri.002G043500	Potri.002G043500(AS)	POPTR_0002s04440	sp|O04336|WRK21_ARATH	Probable WRKY transcription factor 21 OS=Arabidopsis thaliana GN=WRKY21 PE=2 SV=1	AT2G30590.1	| Symbols: WRKY21 | WRKY DNA-binding protein 21 | chr2:13033891-13035303 FORWARD LENGTH=380	LOC_Os03g53050.1	protein|WRKY121, expressed	IMGA|contig_58339_1.1	WRKY transcription factor contig_58339 24-2156 F PREDN 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005516|calmodulin binding GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_05388	A	A1S	Potri.002G043600	Potri.002G043600(AS)	POPTR_0002s04450	sp|Q9SMU7|SRP09_ARATH	Signal recognition particle 9 kDa protein OS=Arabidopsis thaliana GN=SRP9 PE=2 SV=1	AT3G49100.1	| Symbols: | Signal recognition particle, SRP9/SRP14 subunit | chr3:18196944-18198298 FORWARD LENGTH=103	LOC_Os06g14550.1	protein|signal recognition particle 9 kDa protein, putative, expressed	IMGA|contig_50711_2.1	Signal recognition particle protein contig_50711 3612-2375 E PREDN 20111014	GO:0006614|SRP-dependent cotranslational protein targeting to membrane GO:0045900|negative regulation of translational elongation	GO:0005047|signal recognition particle binding GO:0008312|7S RNA binding	GO:0005737|cytoplasm GO:0048500|signal recognition particle
pt2_05389	A	A1S	Potri.002G043700	Potri.002G043700(AS)	POPTR_0002s04460	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05390	A	A1S	Potri.002G043800	Potri.002G043800(AS)	POPTR_0002s04470	sp|Q9C889|PR1F2_ARATH	PRA1 family protein F2 OS=Arabidopsis thaliana GN=PRA1F2 PE=1 SV=1	AT1G55190.1	| Symbols: PRA1.F2, PRA7 | PRA1 (Prenylated rab acceptor) family protein | chr1:20588450-20589019 FORWARD LENGTH=189	LOC_Os05g39670.1	protein|prenylated rab acceptor, putative, expressed	IMGA|Medtr5g083490.1	PRA1 family protein B1 chr5 35022755-35020420 E EGN_Mt100125 20111014	GO:0016192|vesicle-mediated transport	NA	GO:0005774|vacuolar membrane GO:0005783|endoplasmic reticulum GO:0005794|Golgi apparatus GO:0009507|chloroplast
pt2_05391	A	A2S	Potri.002G043900	Potri.002G043900(AS) Potri.005G070300(BS)	POPTR_0002s04480	NA	NA	NA	NA	LOC_Os11g06900.1	protein|amidase family protein, putative, expressed	NA	NA	GO:0051127|positive regulation of actin nucleation	GO:0005515|protein binding	GO:0005737|cytoplasm GO:0031209|SCAR complex
pt2_05392	A	A1S	Potri.002G044000	Potri.002G044000(AS)	POPTR_0002s04490	sp|Q9C889|PR1F2_ARATH	PRA1 family protein F2 OS=Arabidopsis thaliana GN=PRA1F2 PE=1 SV=1	AT1G55190.1	| Symbols: PRA1.F2, PRA7 | PRA1 (Prenylated rab acceptor) family protein | chr1:20588450-20589019 FORWARD LENGTH=189	LOC_Os05g39670.1	protein|prenylated rab acceptor, putative, expressed	IMGA|Medtr5g083490.1	PRA1 family protein B1 chr5 35022755-35020420 E EGN_Mt100125 20111014	GO:0016192|vesicle-mediated transport	NA	GO:0005774|vacuolar membrane GO:0005783|endoplasmic reticulum GO:0005794|Golgi apparatus GO:0009507|chloroplast
pt2_05393	A	A1S	Potri.002G044100	Potri.002G044100(AS)	POPTR_0002s04500	sp|Q94AY3|DRIP2_ARATH	E3 ubiquitin protein ligase DRIP2 OS=Arabidopsis thaliana GN=DRIP2 PE=1 SV=1	AT2G30580.1	| Symbols: DRIP2 | DREB2A-interacting protein 2 | chr2:13026444-13030363 FORWARD LENGTH=420	LOC_Os03g43360.2	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|contig_51360_1.1	Polycomb group ring finger contig_51360 438-2762 E PREDN 20111014	GO:0009414|response to water deprivation GO:0016567|protein ubiquitination GO:0051865|protein autoubiquitination	GO:0004842|ubiquitin-protein ligase activity GO:0005515|protein binding GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_05394	A	A1S	Potri.002G044200	Potri.002G044200(AS)	POPTR_0002s04510	sp|Q8RXE1|GAUT5_ARATH	Probable galacturonosyltransferase 5 OS=Arabidopsis thaliana GN=GAUT5 PE=2 SV=1	AT2G30575.1	| Symbols: GAUT5, LGT5 | los glycosyltransferase 5 | chr2:13020564-13023906 REVERSE LENGTH=610	LOC_Os11g37980.1	protein|GAUT2/LGT2, putative, expressed	NA	NA	GO:0016051|carbohydrate biosynthetic process	GO:0016757|transferase activity, transferring glycosyl groups GO:0047262|polygalacturonate 4-alpha-galacturonosyltransferase activity	GO:0005794|Golgi apparatus
pt2_05395	A	A1S	Potri.002G044300	Potri.002G044300(AS)	POPTR_0002s04520	sp|Q41387|PSBW_SPIOL	Photosystem II reaction center W protein, chloroplastic OS=Spinacia oleracea GN=psbW PE=1 SV=1	AT2G30570.1	| Symbols: PSBW | photosystem II reaction center W | chr2:13019326-13020053 REVERSE LENGTH=133	LOC_Os05g43310.1	protein|photosystem II reaction center W protein, chloroplast precursor, putative, expressed	NA	NA	GO:0006364|rRNA processing GO:0009657|plastid organization GO:0010207|photosystem II assembly GO:0015979|photosynthesis GO:0042549|photosystem II stabilization	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009523|photosystem II GO:0009535|chloroplast thylakoid membrane
pt2_05396	C	C1A	Potri.002G044400	Potri.002G044400(CA)	NA	NA	AT1G03030.1	| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:701621-703568 FORWARD LENGTH=301	NA	NA	NA	NA	GO:0008152|metabolic process GO:0009058|biosynthetic process	GO:0005524|ATP binding GO:0016301|kinase activity GO:0016773|phosphotransferase activity, alcohol group as acceptor	GO:0005737|cytoplasm GO:0009507|chloroplast
pt2_05397	A	A1S	Potri.002G044500	Potri.002G044500(AS)	POPTR_0002s04540	sp|Q9Y535|RPC8_HUMAN	DNA-directed RNA polymerase III subunit RPC8 OS=Homo sapiens GN=POLR3H PE=1 SV=1	AT1G06790.1	| Symbols: | RNA polymerase Rpb7 N-terminal domain-containing protein | chr1:2087645-2089287 FORWARD LENGTH=204	LOC_Os07g29420.1	protein|DNA-directed RNA polymerase III subunit RPC8, putative, expressed	NA	NA	GO:0006351|transcription, DNA-dependent GO:0009062|fatty acid catabolic process	GO:0003899|DNA-directed RNA polymerase activity	GO:0005575|cellular_component GO:0005634|nucleus GO:0009507|chloroplast
pt2_05398	A	A1S	Potri.002G044600	Potri.002G044600(AS)	POPTR_0002s04550	sp|Q9FMU5|UTP18_ARATH	U3 small nucleolar RNA-associated protein 18 homolog OS=Arabidopsis thaliana GN=At5g14050 PE=1 SV=1	AT5G14050.1	| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr5:4533539-4535179 FORWARD LENGTH=546	LOC_Os07g41190.1	protein|WD domain, G-beta repeat domain containing protein, expressed	NA	NA	GO:0006164|purine nucleotide biosynthetic process GO:0008150|biological_process GO:0009220|pyrimidine ribonucleotide biosynthetic process	GO:0000166|nucleotide binding	GO:0005634|nucleus GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_05399	A	A1S	Potri.002G044700	Potri.002G044700(AS)	POPTR_0002s04560	sp|Q941F1|PLA15_ARATH	Phospholipase A1-Igamma1, chloroplastic OS=Arabidopsis thaliana GN=At1g06800 PE=1 SV=2	AT1G06800.1	| Symbols: PLA-I{gamma}1 | alpha/beta-Hydrolases superfamily protein | chr1:2089538-2091443 REVERSE LENGTH=515	LOC_Os05g32380.1	protein|phospholipase, putative, expressed	IMGA|contig_239396_1.1	Lipase family protein contig_239396 2101-830 H PREDN 20111014	GO:0006629|lipid metabolic process	GO:0004806|triglyceride lipase activity GO:0008970|phosphatidylcholine 1-acylhydrolase activity GO:0047714|galactolipase activity	GO:0009507|chloroplast
pt2_05400	A	A1S	Potri.002G044800	Potri.002G044800(AS)	POPTR_0002s04570	sp|Q8W104|FBL17_ARATH	F-box/LRR-repeat protein 17 OS=Arabidopsis thaliana GN=FBL17 PE=1 SV=1	AT3G54650.1	| Symbols: FBL17 | RNI-like superfamily protein | chr3:20226004-20228882 REVERSE LENGTH=593	LOC_Os03g43390.1	protein|F-box/LRR domain containing protein, putative, expressed	NA	NA	GO:0006261|DNA-dependent DNA replication GO:0006511|ubiquitin-dependent protein catabolic process GO:0009555|pollen development GO:0009790|embryo development GO:0031146|SCF-dependent proteasomal ubiquitin-dependent protein catabolic process GO:0048316|seed development GO:0055047|generative cell mitosis	GO:0004842|ubiquitin-protein ligase activity GO:0005515|protein binding	GO:0001673|male germ cell nucleus GO:0009507|chloroplast GO:0019005|SCF ubiquitin ligase complex
pt2_05401	A	A1S	Potri.002G044900	Potri.002G044900(AS)	POPTR_0002s04580	sp|P13089|AUX28_SOYBN	Auxin-induced protein AUX28 OS=Glycine max GN=AUX28 PE=2 SV=1	AT4G14550.1	| Symbols: IAA14, SLR | indole-3-acetic acid inducible 14 | chr4:8348521-8349923 REVERSE LENGTH=228	LOC_Os12g40890.1	protein|OsIAA30 - Auxin-responsive Aux/IAA gene family member, expressed	IMGA|Medtr5g030710.1	Auxin-responsive protein (Aux/IAA) chr5 12699892-12694370 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009733|response to auxin stimulus GO:0009741|response to brassinosteroid stimulus GO:0010102|lateral root morphogenesis GO:0010583|response to cyclopentenone GO:0045892|negative regulation of transcription, DNA-dependent GO:0048527|lateral root development	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_05402	A	A1S	Potri.002G045000	Potri.002G045000(AS)	POPTR_0002s04590	sp|O24542|AX22D_VIGRR	Auxin-induced protein 22D OS=Vigna radiata var. radiata GN=AUX22D PE=2 SV=1	AT5G43700.1	| Symbols: ATAUX2-11, IAA4 | AUX/IAA transcriptional regulator family protein | chr5:17550465-17551206 FORWARD LENGTH=186	LOC_Os12g40900.1	protein|OsIAA31 - Auxin-responsive Aux/IAA gene family member, expressed	IMGA|Medtr1g070830.1	Auxin-induced protein chr1 17318116-17319328 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006417|regulation of translation GO:0007020|microtubule nucleation GO:0009733|response to auxin stimulus GO:0009736|cytokinin mediated signaling pathway GO:0010583|response to cyclopentenone	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0046983|protein dimerization activity	GO:0005622|intracellular GO:0005634|nucleus
pt2_05403	A	A1S	Potri.002G045100	Potri.002G045100(AS)	POPTR_0002s04600	sp|Q9SX99|OSB1_ARATH	Protein OSB1, mitochondrial OS=Arabidopsis thaliana GN=OSB1 PE=1 SV=1	AT1G47720.1	| Symbols: OSB1 | Primosome PriB/single-strand DNA-binding | chr1:17561514-17562859 REVERSE LENGTH=261	LOC_Os03g43420.1	protein|single-stranded DNA-binding protein, putative, expressed	NA	NA	GO:0000002|mitochondrial genome maintenance GO:0006355|regulation of transcription, DNA-dependent GO:0008150|biological_process GO:0043687|post-translational protein modification GO:0045893|positive regulation of transcription, DNA-dependent GO:0045910|negative regulation of DNA recombination	GO:0003697|single-stranded DNA binding	GO:0005739|mitochondrion GO:0009295|nucleoid GO:0009507|chloroplast GO:0009508|plastid chromosome GO:0048046|apoplast
pt2_05404	A	A1S	Potri.002G045200	Potri.002G045200(AS)	POPTR_0002s04610	sp|O22769|NDUV2_ARATH	NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Arabidopsis thaliana GN=At4g02580 PE=1 SV=3	AT4G02580.1	| Symbols: | NADH-ubiquinone oxidoreductase 24 kDa subunit, putative | chr4:1134586-1136906 FORWARD LENGTH=255	LOC_Os05g43360.1	protein|NADH dehydrogenase flavoprotein 2, mitochondrial precursor, putative, expressed	NA	NA	GO:0006120|mitochondrial electron transport, NADH to ubiquinone GO:0006511|ubiquitin-dependent protein catabolic process GO:0006979|response to oxidative stress GO:0009853|photorespiration GO:0051788|response to misfolded protein GO:0055114|oxidation-reduction process GO:0080129|proteasome core complex assembly	GO:0008137|NADH dehydrogenase (ubiquinone) activity GO:0008270|zinc ion binding GO:0016491|oxidoreductase activity GO:0051287|NAD binding	GO:0005739|mitochondrion GO:0005747|mitochondrial respiratory chain complex I
pt2_05405	A	A1S	Potri.002G045400	Potri.002G045400(AS)	POPTR_0002s04620	sp|O22768|UNE12_ARATH	Transcription factor UNE12 OS=Arabidopsis thaliana GN=UNE12 PE=2 SV=2	AT4G02590.2	| Symbols: UNE12 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr4:1137968-1140306 REVERSE LENGTH=310	LOC_Os07g08440.1	protein|BHLH transcription factor, putative, expressed	IMGA|Medtr1g070870.2	Transcription factor UNE12 chr1 17332525-17328993 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009567|double fertilization forming a zygote and endosperm GO:0031347|regulation of defense response	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_05406	B	B1S	Potri.002G045500	Potri.002G045500(BS)	POPTR_0002s04630	NA	NA	AT5G43680.2	| Symbols: | unknown protein; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages. | chr5:17544074-17545354 FORWARD LENGTH=232	LOC_Os11g34950.1	protein|expressed protein	IMGA|Medtr1g070900.1	Sec-independent protein translocase protein tatB-like protein chr1 17341573-17339575 F EGN_Mt100125 20111014	NA	NA	GO:0005886|plasma membrane
pt2_05407	A	A1S	Potri.002G045700	Potri.002G045700(AS)	POPTR_0002s04640	sp|P42390|TRPA_MAIZE	Indole-3-glycerol phosphate lyase, chloroplastic OS=Zea mays GN=BX1 PE=1 SV=2	AT3G54640.1	| Symbols: TSA1, TRP3 | tryptophan synthase alpha chain | chr3:20223331-20225303 REVERSE LENGTH=312	LOC_Os07g08430.1	protein|indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed	NA	NA	GO:0000162|tryptophan biosynthetic process GO:0000165|MAPK cascade GO:0002831|regulation of response to biotic stimulus GO:0006569|tryptophan catabolic process GO:0006612|protein targeting to membrane GO:0009595|detection of biotic stimulus GO:0009627|systemic acquired resistance GO:0009630|gravitropism GO:0009684|indoleacetic acid biosynthetic process GO:0009697|salicylic acid biosynthetic process GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0016045|detection of bacterium GO:0031347|regulation of defense response GO:0031348|negative regulation of defense response GO:0034976|response to endoplasmic reticulum stress GO:0042742|defense response to bacterium GO:0043900|regulation of multi-organism process GO:0050776|regulation of immune response GO:0050832|defense response to fungus GO:0052544|defense response by callose deposition in cell wall	GO:0004834|tryptophan synthase activity	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_05408	A	A1S	Potri.002G045800	Potri.002G045800(AS)	POPTR_0002s04660	sp|Q99090|CPRF2_PETCR	Light-inducible protein CPRF2 OS=Petroselinum crispum GN=CPRF2 PE=2 SV=2	AT3G54620.1	| Symbols: ATBZIP25, BZO2H4, BZIP25 | basic leucine zipper 25 | chr3:20218085-20220341 REVERSE LENGTH=403	LOC_Os03g58250.1	protein|bZIP transcription factor domain containing protein, expressed	IMGA|Medtr1g008990.3	Transcription factor bZIP chr1 1751125-1746033 F EGN_Mt100125 20111014	GO:0002240|response to molecule of oomycetes origin GO:0006355|regulation of transcription, DNA-dependent GO:0009410|response to xenobiotic stimulus GO:0009626|plant-type hypersensitive response GO:0030968|endoplasmic reticulum unfolded protein response GO:0045893|positive regulation of transcription, DNA-dependent GO:2000693|positive regulation of seed maturation	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0043565|sequence-specific DNA binding GO:0046982|protein heterodimerization activity GO:0046983|protein dimerization activity	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_05409	A	A1S	Potri.002G045900	Potri.002G045900(AS)	POPTR_0002s04670	sp|Q9AR19|GCN5_ARATH	Histone acetyltransferase GCN5 OS=Arabidopsis thaliana GN=HAG1 PE=1 SV=1	AT3G54610.1	| Symbols: HAT1, GCN5, HAG1, HAC3, HAG01, BGT | histone acetyltransferase of the GNAT family 1 | chr3:20213593-20217375 FORWARD LENGTH=568	LOC_Os10g28040.1	protein|histone acetyltransferase GCN5, putative, expressed	IMGA|Medtr5g093070.1	Bromodomain-containing protein chr5 39593358-39587047 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009410|response to xenobiotic stimulus GO:0009416|response to light stimulus GO:0009640|photomorphogenesis GO:0009908|flower development GO:0010015|root morphogenesis GO:0010388|cullin deneddylation GO:0016567|protein ubiquitination GO:0016571|histone methylation GO:0016573|histone acetylation GO:0016579|protein deubiquitination GO:0043687|post-translational protein modification GO:0045893|positive regulation of transcription, DNA-dependent GO:0048522|positive regulation of cellular process	GO:0003677|DNA binding GO:0004402|histone acetyltransferase activity GO:0005515|protein binding GO:0008080|N-acetyltransferase activity GO:0010484|H3 histone acetyltransferase activity	GO:0000123|histone acetyltransferase complex GO:0005634|nucleus
pt2_05410	A	A1S	Potri.002G046000	Potri.002G046000(AS)	POPTR_0002s04680	sp|Q96PP9|GBP4_HUMAN	Guanylate-binding protein 4 OS=Homo sapiens GN=GBP4 PE=1 SV=2	AT2G38840.1	| Symbols: | Guanylate-binding family protein | chr2:16227329-16232115 FORWARD LENGTH=602	LOC_Os03g58240.1	protein|GTP binding protein, putative, expressed	NA	NA	GO:0006955|immune response	GO:0003924|GTPase activity GO:0005525|GTP binding	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_05411	G	G1	NA	NA	POPTR_0002s04690	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05412	C	C1S	Potri.002G046200	Potri.002G046200(CS)	sp|Q9LHG8|ELC_ARATH	Protein ELC OS=Arabidopsis thaliana GN=ELC PE=1 SV=1	AT2G38830.1	| Symbols: | Ubiquitin-conjugating enzyme/RWD-like protein | chr2:16225777-16226772 FORWARD LENGTH=331	LOC_Os02g58640.1	protein|tumor susceptibility gene 101, putative, expressed	IMGA|Medtr5g075880.1	Protein ELC chr5 31283129-31282572 H EGN_Mt100125 20111014	GO:0006464|cellular protein modification process GO:0015031|protein transport	GO:0003674|molecular_function	NA
pt2_05413	A	A1S	Potri.002G046300	Potri.002G046300(AS)	POPTR_0002s04710	NA	NA	AT3G22970.1	| Symbols: | Protein of unknown function (DUF506) | chr3:8152592-8153881 FORWARD LENGTH=370	LOC_Os03g58230.1	protein|plant-specific domain TIGR01615 family protein, expressed	IMGA|Medtr1g070970.1	hypothetical protein chr1 17367673-17366452 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0009507|chloroplast
pt2_05414	A	A1S	Potri.002G046300	Potri.002G046300(AS)	POPTR_0002s04710	NA	NA	AT3G22970.1	| Symbols: | Protein of unknown function (DUF506) | chr3:8152592-8153881 FORWARD LENGTH=370	LOC_Os03g58230.1	protein|plant-specific domain TIGR01615 family protein, expressed	IMGA|Medtr1g070970.1	hypothetical protein chr1 17367673-17366452 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0009507|chloroplast
pt2_05415	B	B1S	Potri.002G046400	Potri.002G046400(BS)	POPTR_0002s04720	sp|O23628|H2AV1_ARATH	Histone H2A variant 1 OS=Arabidopsis thaliana GN=H2AV PE=1 SV=1	AT3G54560.1	| Symbols: HTA11 | histone H2A 11 | chr3:20196532-20197466 FORWARD LENGTH=136	LOC_Os03g06670.1	protein|Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed	IMGA|AC229724_1056.1	Histone H2A AC229724.12 219354-219749 H EGN_Mt100125 20111014	GO:0006334|nucleosome assembly GO:0006338|chromatin remodeling GO:0009908|flower development GO:0009909|regulation of flower development GO:0016048|detection of temperature stimulus GO:0042742|defense response to bacterium	GO:0003677|DNA binding GO:0005515|protein binding	GO:0000786|nucleosome GO:0005634|nucleus
pt2_05416	A	A1S	Potri.002G046500	Potri.002G046500(AS)	POPTR_0002s04730	NA	NA	AT1G03055.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64680.1); Has 143 Blast hits to 143 proteins in 26 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). | chr1:710102-711763 REVERSE LENGTH=264	LOC_Os08g02210.1	protein|expressed protein	IMGA|contig_85300_1.1	Homology to unknown gene contig_85300 66-2892 E PREDN 20111014	GO:0010223|secondary shoot formation GO:1901601|strigolactone biosynthetic process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0009536|plastid
pt2_05417	A	A1S	Potri.002G046600	Potri.002G046600(AS)	POPTR_0002s04740	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05418	A	A1S	Potri.002G046700	Potri.002G046700(AS)	POPTR_0002s04750	NA	NA	AT3G63430.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G74160.1); Has 135 Blast hits to 119 proteins in 22 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 3; Plants - 119; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). | chr3:23420414-23422201 FORWARD LENGTH=540	LOC_Os11g37670.1	protein|expressed protein	IMGA|Medtr1g071070.1	hypothetical protein chr1 17416289-17413402 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05419	A	A1S	Potri.002G046800	Potri.002G046800(AS)	POPTR_0002s04760	NA	NA	AT4G32440.1	| Symbols: | Plant Tudor-like RNA-binding protein | chr4:15657295-15658692 FORWARD LENGTH=377	LOC_Os02g11000.2	protein|agenet domain containing protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003723|RNA binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05420	A	A1S	Potri.002G046900	Potri.002G046900(AS)	POPTR_0002s04770	NA	NA	AT3G63420.2	| Symbols: AGG1, ATAGG1, GG1 | Ggamma-subunit 1 | chr3:23417383-23418405 FORWARD LENGTH=98	NA	NA	IMGA|Medtr1g071100.1	hypothetical protein chr1 17441706-17438708 F EGN_Mt100125 20111014	GO:0009817|defense response to fungus, incompatible interaction GO:0009845|seed germination GO:0010541|acropetal auxin transport GO:0048527|lateral root development	GO:0005525|GTP binding	GO:0005737|cytoplasm GO:0005886|plasma membrane
pt2_05421	A	A1S	Potri.002G047000	Potri.002G047000(AS)	POPTR_0002s04780	sp|Q84KJ6|AMT31_ORYSJ	Ammonium transporter 3 member 1 OS=Oryza sativa subsp. japonica GN=AMT3-1 PE=2 SV=1	AT2G38290.1	| Symbols: ATAMT2, AMT2;1, AMT2 | ammonium transporter 2 | chr2:16039672-16042291 REVERSE LENGTH=475	LOC_Os01g65000.1	protein|ammonium transporter protein, putative, expressed	IMGA|contig_48397_2.1	Ammonium transporter contig_48397 3676-3245 E PREDN 20111014	GO:0000165|MAPK cascade GO:0002237|response to molecule of bacterial origin GO:0002831|regulation of response to biotic stimulus GO:0006612|protein targeting to membrane GO:0006820|anion transport GO:0006862|nucleotide transport GO:0006888|ER to Golgi vesicle-mediated transport GO:0006944|cellular membrane fusion GO:0006995|cellular response to nitrogen starvation GO:0009409|response to cold GO:0009581|detection of external stimulus GO:0009595|detection of biotic stimulus GO:0009605|response to external stimulus GO:0009624|response to nematode GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process GO:0009738|abscisic acid mediated signaling pathway GO:0009744|response to sucrose stimulus GO:0009749|response to glucose stimulus GO:0009750|response to fructose stimulus GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0015695|organic cation transport GO:0015696|ammonium transport GO:0015802|basic amino acid transport GO:0030968|endoplasmic reticulum unfolded protein response GO:0031347|regulation of defense response GO:0031348|negative regulation of defense response GO:0042742|defense response to bacterium GO:0043069|negative regulation of programmed cell death GO:0043090|amino acid import GO:0043269|regulation of ion transport GO:0043900|regulation of multi-organism process GO:0050832|defense response to fungus GO:0051707|response to other organism	GO:0008519|ammonium transmembrane transporter activity GO:0015398|high affinity secondary active ammonium transmembrane transporter activity	GO:0005737|cytoplasm GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_05422	A	A1S	Potri.002G047100	Potri.002G047100(AS)	POPTR_0002s04790	sp|P23525|IN37_SPIOL	37 kDa inner envelope membrane protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1	AT3G63410.1	| Symbols: APG1, VTE3, IEP37, E37 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr3:23415816-23417002 REVERSE LENGTH=338	LOC_Os07g08200.1	protein|methyltransferase domain containing protein, putative, expressed	IMGA|contig_52080_1.1	Methyltransferase UbiE/COQ5 family contig_52080 260-2876 F PREDN 20111014	GO:0006655|phosphatidylglycerol biosynthetic process GO:0008152|metabolic process GO:0010189|vitamin E biosynthetic process GO:0010236|plastoquinone biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019761|glucosinolate biosynthetic process	GO:0008168|methyltransferase activity GO:0008757|S-adenosylmethionine-dependent methyltransferase activity GO:0051741|2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity	GO:0009507|chloroplast GO:0009536|plastid GO:0009706|chloroplast inner membrane GO:0009941|chloroplast envelope
pt2_05423	A	A1S	Potri.002G047200	Potri.002G047200(AS)	POPTR_0002s04800	sp|Q9CR16|PPID_MOUSE	Peptidyl-prolyl cis-trans isomerase D OS=Mus musculus GN=Ppid PE=1 SV=3	AT3G63400.2	| Symbols: | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein | chr3:23412449-23415435 FORWARD LENGTH=387	LOC_Os02g10970.3	protein|peptidyl-prolyl cis-trans isomerase, putative, expressed	IMGA|AC225458_18.1	Peptidyl-prolyl cis-trans isomerase AC225458.11 44405-42269 E EGN_Mt100125 20111014	GO:0000398|mRNA splicing, via spliceosome GO:0000741|karyogamy GO:0006457|protein folding GO:0008380|RNA splicing GO:0009560|embryo sac egg cell differentiation	GO:0003755|peptidyl-prolyl cis-trans isomerase activity GO:0005515|protein binding	GO:0005737|cytoplasm
pt2_05424	A	A1S	Potri.002G047300	Potri.002G047300(AS)	POPTR_0002s04810	sp|O82018|CALM_MOUSC	Calmodulin OS=Mougeotia scalaris PE=2 SV=3	AT4G14640.1	| Symbols: CAM8, AtCML8 | calmodulin 8 | chr4:8397800-8399996 FORWARD LENGTH=151	LOC_Os05g41210.1	protein|OsCam2 - Calmodulin, expressed	IMGA|Medtr5g088320.1	Calmodulin chr5 37281091-37277966 F EGN_Mt100125 20111014	GO:0008150|biological_process GO:0051645|Golgi localization GO:0051646|mitochondrion localization GO:0060151|peroxisome localization	GO:0005509|calcium ion binding	NA
pt2_05425	A	A1S	Potri.002G047400	Potri.002G047400(AS)	POPTR_0002s04820	NA	NA	AT3G63390.1	| Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr3:23411416-23411943 REVERSE LENGTH=175	LOC_Os11g40200.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005634|nucleus GO:0009536|plastid
pt2_05426	A	A1S	Potri.002G047400	Potri.002G047400(AS)	POPTR_0002s04830	NA	NA	AT3G63390.1	| Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr3:23411416-23411943 REVERSE LENGTH=175	LOC_Os11g40200.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005634|nucleus GO:0009536|plastid
pt2_05427	A	A1S	Potri.002G047500	Potri.002G047500(AS)	POPTR_0002s04840	sp|Q9LY77|ACA12_ARATH	Calcium-transporting ATPase 12, plasma membrane-type OS=Arabidopsis thaliana GN=ACA12 PE=2 SV=1	AT3G63380.1	| Symbols: | ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein | chr3:23407112-23410213 REVERSE LENGTH=1033	LOC_Os10g28240.1	protein|calcium-transporting ATPase, plasma membrane-type, putative, expressed	IMGA|Medtr5g015590.1	"Calcium-transporting ATPase 2, plasma membrane-type" chr5 5159662-5165001 E EGN_Mt100125 20111014	GO:0002679|respiratory burst involved in defense response GO:0006754|ATP biosynthetic process GO:0006812|cation transport GO:0006816|calcium ion transport GO:0006882|cellular zinc ion homeostasis GO:0008152|metabolic process GO:0009624|response to nematode GO:0010200|response to chitin GO:0030968|endoplasmic reticulum unfolded protein response GO:0070588|calcium ion transmembrane transport	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0005388|calcium-transporting ATPase activity GO:0005516|calmodulin binding GO:0005524|ATP binding GO:0015662|ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism GO:0046872|metal ion binding	GO:0016020|membrane
pt2_05428	A	A1S	Potri.002G047600	Potri.002G047600(AS)	POPTR_0002s04850	sp|Q3E6Q1|PPR32_ARATH	Pentatricopeptide repeat-containing protein At1g11290 OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1	AT1G11290.1	| Symbols: CRR22 | Pentatricopeptide repeat (PPR) superfamily protein | chr1:3791454-3793883 REVERSE LENGTH=809	LOC_Os04g39410.1	protein|pentatricopeptide, putative, expressed	IMGA|Medtr1g071240.1	Pentatricopeptide repeat-containing protein chr1 17511913-17505644 H EGN_Mt100125 20111014	GO:0080156|mitochondrial mRNA modification	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_05429	A	A1S	Potri.002G047700	Potri.002G047700(AS)	POPTR_0002s04860	sp|Q6VNB8|WDFY3_MOUSE	WD repeat and FYVE domain-containing protein 3 OS=Mus musculus GN=Wdfy3 PE=1 SV=1	AT1G03060.1	| Symbols: SPI | Beige/BEACH domain ;WD domain, G-beta repeat protein | chr1:712971-726891 REVERSE LENGTH=3601	LOC_Os03g53280.1	protein|WD domain containing protein, putative, expressed	IMGA|Medtr1g071260.1	WD repeat and FYVE domain-containing protein chr1 17536650-17518820 H EGN_Mt100125 20111014	GO:0007165|signal transduction	NA	GO:0005634|nucleus GO:0009507|chloroplast
pt2_05430	A	A2S	Potri.002G047800	Potri.002G047800(AS) Potri.002G047900(AS)	POPTR_0002s04870	NA	NA	AT5G19840.2	| Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr5:6705372-6709063 FORWARD LENGTH=549	LOC_Os01g56640.3	protein|transcription factor jumonji, putative, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05431	A	A1S	Potri.002G048000	Potri.002G048000(AS)	POPTR_0002s04880	sp|Q9ZWA6|MGP_ARATH	Zinc finger protein MAGPIE OS=Arabidopsis thaliana GN=MGP PE=1 SV=1	AT4G02670.1	| Symbols: AtIDD12, IDD12 | indeterminate(ID)-domain 12 | chr4:1176190-1178489 REVERSE LENGTH=402	LOC_Os03g10140.1	protein|ZOS3-04 - C2H2 zinc finger protein, expressed	IMGA|Medtr1g083100.1	Zinc finger protein-like protein chr1 21501009-21504901 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003676|nucleic acid binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_05432	A	A1S	Potri.002G048100	Potri.002G048100(AS)	POPTR_0002s04890	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05433	A	A1S	Potri.002G048200	Potri.002G048200(AS)	POPTR_0002s04900	sp|Q9LUH8|HFA6B_ARATH	Heat stress transcription factor A-6b OS=Arabidopsis thaliana GN=HSFA6b PE=2 SV=1	AT3G22830.1	| Symbols: AT-HSFA6B, HSFA6B | heat shock transcription factor A6B | chr3:8078981-8080895 FORWARD LENGTH=406	LOC_Os03g58160.1	protein|heat stress transcription factor, putative, expressed	IMGA|Medtr5g029680.1	Heat stress transcription factor A-1d chr5 12231861-12227178 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009407|toxin catabolic process	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_05434	A	A2S	Potri.002G048300	Potri.002G048300(AS) Potri.005G214400(DS)	POPTR_0002s04910	sp|Q9ZQX6|ETOL1_ARATH	ETO1-like protein 1 OS=Arabidopsis thaliana GN=EOL1 PE=1 SV=1	AT4G02680.1	| Symbols: EOL1 | ETO1-like 1 | chr4:1181202-1184328 REVERSE LENGTH=888	LOC_Os11g37520.1	protein|BTBT3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with tetratricopeptide repeats, expressed	NA	NA	GO:0000096|sulfur amino acid metabolic process GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0007267|cell-cell signaling GO:0008652|cellular amino acid biosynthetic process GO:0009069|serine family amino acid metabolic process GO:0009086|methionine biosynthetic process GO:0009616|virus induced gene silencing GO:0009855|determination of bilateral symmetry GO:0010014|meristem initiation GO:0010050|vegetative phase change GO:0010073|meristem maintenance GO:0010267|production of ta-siRNAs involved in RNA interference GO:0010364|regulation of ethylene biosynthetic process GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0042545|cell wall modification	GO:0005515|protein binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05435	A	A1S	Potri.002G048500	Potri.002G048500(AS)	POPTR_0002s04920	sp|Q8GY55|TIF4B_ARATH	Protein TIFY 4B OS=Arabidopsis thaliana GN=TIFY4B PE=1 SV=1	AT4G14720.1	| Symbols: PPD2, TIFY4B | TIFY domain/Divergent CCT motif family protein | chr4:8432452-8434934 REVERSE LENGTH=315	NA	NA	NA	NA	GO:0048366|leaf development GO:0055114|oxidation-reduction process	GO:0005515|protein binding GO:0010309|acireductone dioxygenase [iron(II)-requiring] activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05436	A	A1S	Potri.002G048500	Potri.002G048500(AS)	POPTR_0002s04920	sp|Q8GY55|TIF4B_ARATH	Protein TIFY 4B OS=Arabidopsis thaliana GN=TIFY4B PE=1 SV=1	AT4G14720.1	| Symbols: PPD2, TIFY4B | TIFY domain/Divergent CCT motif family protein | chr4:8432452-8434934 REVERSE LENGTH=315	NA	NA	NA	NA	GO:0048366|leaf development GO:0055114|oxidation-reduction process	GO:0005515|protein binding GO:0010309|acireductone dioxygenase [iron(II)-requiring] activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05437	G	G1	NA	NA	POPTR_0002s04930	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05438	A	A1S	Potri.002G048700	Potri.002G048700(AS)	POPTR_0002s04940	NA	NA	NA	NA	NA	NA	IMGA|Medtr5g085340.1	Nuclear factor NF-kappa-B p105 subunit chr5 35865507-35872178 E EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005575|cellular_component
pt2_05439	G	G1	NA	NA	POPTR_0002s04950	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05440	A	A1S	Potri.002G048900	Potri.002G048900(AS)	POPTR_0002s04960	NA	NA	AT3G18670.1	| Symbols: | Ankyrin repeat family protein | chr3:6424135-6426471 REVERSE LENGTH=598	LOC_Os11g14544.5	protein|expressed protein	IMGA|Medtr5g085340.1	Nuclear factor NF-kappa-B p105 subunit chr5 35865507-35872178 E EGN_Mt100125 20111014	NA	NA	NA
pt2_05441	G	G1	NA	NA	POPTR_0002s04970	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05442	A	A1S	Potri.002G049000	Potri.002G049000(AS)	POPTR_0002s04980	sp|Q94A20|BI1L_ARATH	BI1-like protein OS=Arabidopsis thaliana GN=At4g15470 PE=2 SV=1	AT1G03070.2	| Symbols: | Bax inhibitor-1 family protein | chr1:730148-731379 FORWARD LENGTH=247	LOC_Os03g53400.1	protein|transmembrane BAX inhibitor motif-containing protein, putative, expressed	IMGA|Medtr1g071430.1	BI1-like protein chr1 17628881-17630496 F EGN_Mt100125 20111014	GO:0006457|protein folding GO:0008150|biological_process GO:0009408|response to heat GO:0009644|response to high light intensity GO:0042542|response to hydrogen peroxide	GO:0016595|glutamate binding	NA
pt2_05443	A	A1S	Potri.002G049100	Potri.002G049100(AS)	POPTR_0002s04990	NA	NA	AT1G03070.2	| Symbols: | Bax inhibitor-1 family protein | chr1:730148-731379 FORWARD LENGTH=247	LOC_Os07g08070.1	protein|transmembrane BAX inhibitor motif-containing protein, putative, expressed	IMGA|Medtr1g071430.2	BI1-like protein chr1 17628881-17630496 E EGN_Mt100125 20111014	GO:0006457|protein folding GO:0008150|biological_process GO:0009408|response to heat GO:0009644|response to high light intensity GO:0042542|response to hydrogen peroxide	GO:0016595|glutamate binding	NA
pt2_05444	A	A1S	Potri.002G049200	Potri.002G049200(AS)	POPTR_0002s05000	NA	NA	AT3G63300.1	| Symbols: FKD1 | FORKED 1 | chr3:23385033-23387625 FORWARD LENGTH=498	LOC_Os03g43510.1	protein|expressed protein	IMGA|Medtr5g012870.1	hypothetical protein chr5 3695800-3693100 F EGN_Mt100125 20111014	GO:0007165|signal transduction GO:0009733|response to auxin stimulus GO:0009734|auxin mediated signaling pathway GO:0010087|phloem or xylem histogenesis GO:0010305|leaf vascular tissue pattern formation GO:0042127|regulation of cell proliferation	GO:0005543|phospholipid binding GO:0035091|phosphatidylinositol binding	GO:0005575|cellular_component GO:0005634|nucleus GO:0009507|chloroplast
pt2_05445	A	A1S	Potri.002G049300	Potri.002G049300(AS)	POPTR_0002s05010	NA	NA	AT3G63290.1	| Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr3:23381713-23383059 FORWARD LENGTH=403	LOC_Os10g14180.8	protein|expressed protein	NA	NA	GO:0009555|pollen development GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	GO:0009506|plasmodesma
pt2_05446	A	A1S	Potri.002G049400	Potri.002G049400(AS)	POPTR_0002s05020	sp|A2ZMH2|NEK2_ORYSI	Serine/threonine-protein kinase Nek2 OS=Oryza sativa subsp. indica GN=NEK2 PE=2 SV=1	AT3G63280.2	| Symbols: ATNEK4, NEK4 | NIMA-related kinase 4 | chr3:23378582-23381362 FORWARD LENGTH=555	LOC_Os12g41180.1	protein|LSTK-1-like kinase, putative, expressed	IMGA|Medtr1g071480.1	Serine/threonine protein kinase Nek2 chr1 17648833-17644700 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005737|cytoplasm
pt2_05447	A	A1S	Potri.002G049400	Potri.002G049400(AS)	POPTR_0002s05020	sp|A2ZMH2|NEK2_ORYSI	Serine/threonine-protein kinase Nek2 OS=Oryza sativa subsp. indica GN=NEK2 PE=2 SV=1	AT3G63280.2	| Symbols: ATNEK4, NEK4 | NIMA-related kinase 4 | chr3:23378582-23381362 FORWARD LENGTH=555	LOC_Os12g41180.1	protein|LSTK-1-like kinase, putative, expressed	IMGA|Medtr1g071480.1	Serine/threonine protein kinase Nek2 chr1 17648833-17644700 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005737|cytoplasm
pt2_05448	A	A1S	Potri.002G049500	Potri.002G049500(AS)	POPTR_0002s05030	sp|Q9SV13|SUT31_ARATH	Sulfate transporter 3.1 OS=Arabidopsis thaliana GN=SULTR3;1 PE=2 SV=1	AT3G51895.1	| Symbols: SULTR3;1, AST12 | sulfate transporter 3;1 | chr3:19251503-19255677 REVERSE LENGTH=658	LOC_Os03g06520.1	protein|sulfate transporter, putative, expressed	IMGA|Medtr1g071530.1	Sulfate/bicarbonate/oxalate exchanger and transporter sat-1 chr1 17673194-17680143 E EGN_Mt100125 20111014	GO:0006810|transport GO:0008272|sulfate transport GO:0055085|transmembrane transport	GO:0005215|transporter activity GO:0008271|secondary active sulfate transmembrane transporter activity GO:0015116|sulfate transmembrane transporter activity	GO:0016020|membrane GO:0016021|integral to membrane
pt2_05449	G	G1	NA	NA	POPTR_0002s05040	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05450	A	A1S	Potri.002G049600	Potri.002G049600(AS)	POPTR_0002s05050	NA	NA	AT1G03080.1	| Symbols: | kinase interacting (KIP1-like) family protein | chr1:731794-737332 REVERSE LENGTH=1733	LOC_Os03g43684.1	protein|KIP1, putative, expressed	IMGA|Medtr1g071540.1	Centromere protein chr1 17687422-17680824 E EGN_Mt100125 20111014	GO:0006612|protein targeting to membrane GO:0008150|biological_process GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010363|regulation of plant-type hypersensitive response	GO:0003674|molecular_function	GO:0005886|plasma membrane
pt2_05451	A	A1S	Potri.002G049700	Potri.002G049700(AS)	POPTR_0002s05060	sp|Q2MHE4|HT1_ARATH	Serine/threonine-protein kinase HT1 OS=Arabidopsis thaliana GN=HT1 PE=1 SV=1	AT3G22750.1	| Symbols: | Protein kinase superfamily protein | chr3:8037364-8039096 REVERSE LENGTH=378	LOC_Os03g43760.1	protein|protein kinase domain containing protein, expressed	IMGA|Medtr5g006560.1	Kinase-like protein chr5 745796-749508 F EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_05452	A	A2S	Potri.002G049800	Potri.002G049800(AS) Potri.005G213100(DS)	POPTR_0002s05070	sp|Q9M1W4|HMT2_ARATH	Homocysteine S-methyltransferase 2 OS=Arabidopsis thaliana GN=HMT-2 PE=1 SV=1	AT3G63250.1	| Symbols: HMT-2, ATHMT-2, HMT2 | homocysteine methyltransferase 2 | chr3:23370575-23372587 REVERSE LENGTH=333	LOC_Os10g28630.1	protein|homocysteine S-methyltransferase protein, putative, expressed	IMGA|Medtr5g056640.1	Homocysteine s-methyltransferase chr5 22778912-22782952 E EGN_Mt100125 20111014	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0006260|DNA replication GO:0006306|DNA methylation GO:0006355|regulation of transcription, DNA-dependent GO:0008283|cell proliferation GO:0009086|methionine biosynthetic process GO:0009616|virus induced gene silencing GO:0010050|vegetative phase change GO:0033528|S-methylmethionine cycle GO:0043687|post-translational protein modification GO:0045893|positive regulation of transcription, DNA-dependent GO:0051567|histone H3-K9 methylation	GO:0008898|homocysteine S-methyltransferase activity	GO:0005737|cytoplasm
pt2_05453	B	B1S	Potri.002G049900	Potri.002G049900(BS)	POPTR_0002s05080	sp|Q54W07|BUD32_DICDI	Probable serine/threonine-protein kinase BUD32 homolog OS=Dictyostelium discoideum GN=bud32 PE=3 SV=1	AT5G26110.1	| Symbols: | Protein kinase superfamily protein | chr5:9118239-9119352 REVERSE LENGTH=226	LOC_Os10g28640.1	protein|RIO1 family protein, expressed	NA	NA	GO:0006468|protein phosphorylation GO:0006626|protein targeting to mitochondrion	GO:0004672|protein kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	NA
pt2_05454	A	A1S	Potri.002G050000	Potri.002G050000(AS)	POPTR_0002s05090	sp|Q9LR47|IP5P3_ARATH	Type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2 OS=Arabidopsis thaliana GN=CVP2 PE=1 SV=2	AT3G63240.1	| Symbols: | DNAse I-like superfamily protein | chr3:23364411-23366876 REVERSE LENGTH=547	LOC_Os03g57950.1	protein|type I inositol-1,4,5-trisphosphate 5-phosphatase, putative, expressed	IMGA|Medtr5g006820.1	"Type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2" chr5 846137-849246 H EGN_Mt100125 20111014	GO:0008150|biological_process GO:0032957|inositol trisphosphate metabolic process GO:0046854|phosphatidylinositol phosphorylation GO:0046855|inositol phosphate dephosphorylation	GO:0016787|hydrolase activity	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_05455	A	A1S	Potri.002G050100	Potri.002G050100(AS)	POPTR_0002s05100	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus GO:0005739|mitochondrion
pt2_05456	A	A2S	Potri.002G050200	Potri.002G050200(AS) Potri.005G212000(BS)	POPTR_0002s05110	NA	NA	AT2G48140.2	| Symbols: EDA4 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr2:19686442-19687157 FORWARD LENGTH=131	LOC_Os03g57980.1	protein|LTPL99 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	IMGA|Medtr1g071720.1	Non-specific lipid-transfer protein chr1 17785751-17784398 F EGN_Mt100125 20111014	GO:0000041|transition metal ion transport GO:0006869|lipid transport GO:0009561|megagametogenesis	GO:0008289|lipid binding	GO:0031225|anchored to membrane
pt2_05457	A	A1S	Potri.002G050300	Potri.002G050300(AS)	POPTR_0002s05120	NA	NA	AT3G22600.1	| Symbols: | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr3:8006711-8007397 REVERSE LENGTH=170	LOC_Os07g07930.1	protein|LTPL78 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	IMGA|Medtr5g006950.1	Non-specific lipid-transfer protein chr5 909525-910669 F EGN_Mt100125 20111014	GO:0000041|transition metal ion transport GO:0006826|iron ion transport GO:0006869|lipid transport GO:0010106|cellular response to iron ion starvation GO:0010167|response to nitrate GO:0015706|nitrate transport	GO:0008289|lipid binding	GO:0005886|plasma membrane GO:0031225|anchored to membrane
pt2_05458	A	A1S	Potri.002G050400	Potri.002G050400(AS)	POPTR_0002s05130	NA	NA	AT3G22600.1	| Symbols: | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr3:8006711-8007397 REVERSE LENGTH=170	LOC_Os07g07860.1	protein|LTPL76 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	IMGA|Medtr5g006950.1	Non-specific lipid-transfer protein chr5 909525-910669 F EGN_Mt100125 20111014	GO:0006869|lipid transport GO:0010167|response to nitrate GO:0015706|nitrate transport	GO:0008289|lipid binding	GO:0005886|plasma membrane GO:0031225|anchored to membrane
pt2_05459	A	A1S	Potri.002G050500	Potri.002G050500(AS)	POPTR_0002s05140	sp|Q8VYI9|NLTL5_ARATH	Non-specific lipid-transfer protein-like protein At5g64080 OS=Arabidopsis thaliana GN=At5g64080 PE=1 SV=1	AT3G22600.1	| Symbols: | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr3:8006711-8007397 REVERSE LENGTH=170	LOC_Os07g07860.1	protein|LTPL76 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	IMGA|Medtr5g006950.1	Non-specific lipid-transfer protein chr5 909525-910669 F EGN_Mt100125 20111014	GO:0006869|lipid transport GO:0010167|response to nitrate GO:0015706|nitrate transport	GO:0008289|lipid binding	GO:0005886|plasma membrane GO:0031225|anchored to membrane
pt2_05460	A	A1S	Potri.002G050600	Potri.002G050600(AS)	POPTR_0002s05150	sp|Q9M1W7|SKI30_ARATH	F-box/kelch-repeat protein SKIP30 OS=Arabidopsis thaliana GN=SKIP30 PE=1 SV=2	AT3G63220.1	| Symbols: | Galactose oxidase/kelch repeat superfamily protein | chr3:23357540-23358577 REVERSE LENGTH=345	LOC_Os10g24900.1	protein|OsFBK22 - F-box domain and kelch repeat containing protein, expressed	IMGA|contig_62007_1.1	Kelch-like protein contig_62007 3463-628 E PREDN 20111014	GO:0008150|biological_process GO:0009062|fatty acid catabolic process	GO:0003674|molecular_function	GO:0005737|cytoplasm
pt2_05461	A	A1S	Potri.002G050700	Potri.002G050700(AS)	POPTR_0002s05160	NA	NA	NA	NA	NA	NA	NA	NA	GO:0001510|RNA methylation GO:0006400|tRNA modification GO:0008618|7-methylguanosine metabolic process	GO:0000166|nucleotide binding	GO:0005737|cytoplasm
pt2_05462	A	A1S	Potri.002G050800	Potri.002G050800(AS)	POPTR_0002s05170	NA	NA	AT3G22550.1	| Symbols: | Protein of unknown function (DUF581) | chr3:7991827-7992805 REVERSE LENGTH=267	LOC_Os03g46260.1	protein|DUF581 domain containing protein, expressed	IMGA|Medtr1g071780.1	Senescence-associated protein SAG102 chr1 17804386-17805727 F EGN_Mt100125 20111014	NA	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_05463	A	A1S	Potri.002G050900	Potri.002G050900(AS)	POPTR_0002s05180	NA	NA	AT4G02715.1	| Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:1202170-1202787 REVERSE LENGTH=205	NA	NA	IMGA|contig_58240_1.1	Unknown protein contig_58240 3764-1735 F PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05464	A	A1S	Potri.002G051000	Potri.002G051000(AS)	POPTR_0002s05190	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05465	A	A1S	Potri.002G051100	Potri.002G051100(AS)	POPTR_0002s05200	NA	NA	AT3G22530.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14830.1); Has 77 Blast hits to 77 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:7977774-7978370 REVERSE LENGTH=198	LOC_Os07g07670.1	protein|expressed protein	IMGA|Medtr5g006400.1	hypothetical protein chr5 660898-659432 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005774|vacuolar membrane
pt2_05466	A	A1S	Potri.002G051200	Potri.002G051200(AS)	POPTR_0002s05210	NA	NA	NA	NA	NA	NA	NA	NA	GO:0045892|negative regulation of transcription, DNA-dependent	NA	GO:0005634|nucleus
pt2_05467	A	A2S	Potri.002G051300	Potri.002G051300(AS) Potri.005G211200(DS)	POPTR_0002s05220	sp|P34788|RS18_ARATH	40S ribosomal protein S18 OS=Arabidopsis thaliana GN=RPS18A PE=1 SV=1	AT4G09800.1	| Symbols: RPS18C | S18 ribosomal protein | chr4:6173818-6174963 FORWARD LENGTH=152	LOC_Os07g07709.1	protein|ribosomal protein S13p/S18e, putative, expressed	IMGA|Medtr1g098220.1	40S ribosomal protein S18 chr1 28145728-28147698 F EGN_Mt100125 20111014	GO:0001510|RNA methylation GO:0006412|translation	GO:0003676|nucleic acid binding GO:0003723|RNA binding GO:0003735|structural constituent of ribosome GO:0005515|protein binding	GO:0005618|cell wall GO:0005622|intracellular GO:0005737|cytoplasm GO:0005774|vacuolar membrane GO:0005840|ribosome GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0015935|small ribosomal subunit GO:0016020|membrane GO:0022626|cytosolic ribosome GO:0022627|cytosolic small ribosomal subunit
pt2_05468	A	A1S	Potri.002G051400	Potri.002G051400(AS)	POPTR_0002s05230	NA	NA	AT5G36740.1	| Symbols: | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein | chr5:14460790-14465727 FORWARD LENGTH=1179	LOC_Os07g07690.2	protein|PHD-finger domain containing protein, expressed	IMGA|Medtr1g072130.1	hypothetical protein chr1 17983341-17973773 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_05469	A	A1S	Potri.002G051500	Potri.002G051500(AS)	POPTR_0002s05240	sp|Q55ED4|U396_DICDI	UPF0396 protein OS=Dictyostelium discoideum GN=DDB_G0269284 PE=3 SV=1	AT4G02720.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF926 (InterPro:IPR009269); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:1204545-1205813 REVERSE LENGTH=422	LOC_Os09g28220.1	protein|NFKB, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_05470	A	A1S	Potri.002G051600	Potri.002G051600(AS)	POPTR_0002s05250	NA	NA	AT5G28150.1	| Symbols: | Plant protein of unknown function (DUF868) | chr5:10135826-10136695 FORWARD LENGTH=289	LOC_Os03g59200.1	protein|expressed protein	IMGA|Medtr1g081260.1	hypothetical protein chr1 20704037-20697153 E EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005634|nucleus
pt2_05471	A	A1S	Potri.002G051700	Potri.002G051700(AS)	POPTR_0002s05260	NA	NA	AT4G02725.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; Has 107 Blast hits to 107 proteins in 55 species: Archae - 0; Bacteria - 69; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). | chr4:1206055-1207000 FORWARD LENGTH=139	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0016020|membrane
pt2_05472	A	A1S	Potri.002G051800	Potri.002G051800(AS)	POPTR_0002s05270	sp|Q0WRC9|SKI17_ARATH	F-box protein SKIP17 OS=Arabidopsis thaliana GN=SKIP17 PE=1 SV=1	AT4G02740.1	| Symbols: | F-box/RNI-like superfamily protein | chr4:1217756-1220834 REVERSE LENGTH=479	NA	NA	NA	NA	NA	GO:0005515|protein binding	GO:0005634|nucleus
pt2_05473	A	A1S	Potri.002G051900	Potri.002G051900(AS)	POPTR_0002s05280	sp|Q498M4|WDR5_RAT	WD repeat-containing protein 5 OS=Rattus norvegicus GN=Wdr5 PE=2 SV=1	AT4G02730.1	| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr4:1207759-1209066 FORWARD LENGTH=333	LOC_Os07g38430.1	protein|WD domain, G-beta repeat domain containing protein, expressed	IMGA|Medtr5g090420.1	WD-repeat protein-like protein chr5 38334682-38338889 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0000166|nucleotide binding	GO:0005634|nucleus GO:0005834|heterotrimeric G-protein complex GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_05474	A	A2S	Potri.002G052000	Potri.002G052000(AS) Potri.005G210400(DS)	POPTR_0002s05290	sp|Q8SSN5|NAA20_DICDI	N-alpha-acetyltransferase 20 OS=Dictyostelium discoideum GN=nat5 PE=3 SV=2	AT1G03150.1	| Symbols: | Acyl-CoA N-acyltransferases (NAT) superfamily protein | chr1:756461-758441 FORWARD LENGTH=174	LOC_Os03g49230.1	protein|acetyltransferase, GNAT family, putative, expressed	NA	NA	GO:0001676|long-chain fatty acid metabolic process GO:0002213|defense response to insect GO:0006633|fatty acid biosynthetic process GO:0008152|metabolic process	GO:0008080|N-acetyltransferase activity	GO:0005575|cellular_component
pt2_05475	A	A1S	Potri.002G052100	Potri.002G052100(AS)	POPTR_0002s05300	sp|O04408|KSA_PEA	Ent-copalyl diphosphate synthase, chloroplastic OS=Pisum sativum PE=2 SV=1	AT4G02780.1	| Symbols: GA1, ABC33, ATCPS1, CPS, CPS1 | Terpenoid cyclases/Protein prenyltransferases superfamily protein | chr4:1237881-1244766 REVERSE LENGTH=802	LOC_Os02g17780.1	protein|ent-kaurene synthase, chloroplast precursor, putative, expressed	IMGA|Medtr5g030050.1	Ent-copalyl diphosphate synthase chr5 12388729-12386224 H EGN_Mt100125 20111014	GO:0008152|metabolic process GO:0009686|gibberellin biosynthetic process GO:0009740|gibberellic acid mediated signaling pathway	GO:0000287|magnesium ion binding GO:0009905|ent-copalyl diphosphate synthase activity GO:0010333|terpene synthase activity GO:0016829|lyase activity	GO:0009507|chloroplast
pt2_05476	R	R	NA	NA	POPTR_0002s05305	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05477	A	A1S	Potri.002G052200	Potri.002G052200(AS)	POPTR_0002s05310	NA	NA	AT3G63170.1	| Symbols: | Chalcone-flavanone isomerase family protein | chr3:23334675-23335993 FORWARD LENGTH=279	LOC_Os07g38390.1	protein|chalcone isomerase, putative, expressed	IMGA|Medtr1g015700.1	hypothetical protein chr1 4406008-4400328 E EGN_Mt100125 20111014	GO:0006631|fatty acid metabolic process	GO:0005504|fatty acid binding	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009536|plastid GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope
pt2_05478	A	A1S	Potri.002G052300	Potri.002G052300(AS)	POPTR_0002s05320	sp|Q94KE2|TIC_ARATH	Protein TIME FOR COFFEE OS=Arabidopsis thaliana GN=TIC PE=1 SV=2	AT3G22380.1	| Symbols: TIC | time for coffee | chr3:7913181-7918879 FORWARD LENGTH=1550	LOC_Os07g38360.2	protein|expressed protein	NA	NA	NA	NA	GO:0005634|nucleus
pt2_05479	A	A1S	Potri.002G052400	Potri.002G052400(AS)	POPTR_0002s05330	sp|P82231|RRFC_SPIOL	Ribosome-recycling factor, chloroplastic OS=Spinacia oleracea GN=RRF PE=1 SV=1	AT3G63190.1	| Symbols: RRF, HFP108, cpRRF, AtcpRRF | ribosome recycling factor, chloroplast precursor | chr3:23342861-23344640 REVERSE LENGTH=275	LOC_Os07g38300.1	protein|ribosome recycling factor, putative, expressed	NA	NA	GO:0006098|pentose-phosphate shunt GO:0006412|translation GO:0009073|aromatic amino acid family biosynthetic process GO:0009658|chloroplast organization GO:0009790|embryo development GO:0009817|defense response to fungus, incompatible interaction GO:0010027|thylakoid membrane organization GO:0016226|iron-sulfur cluster assembly GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019408|dolichol biosynthetic process GO:0032544|plastid translation GO:0042742|defense response to bacterium	GO:0005507|copper ion binding	GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009579|thylakoid
pt2_05480	A	A1S	Potri.002G052500	Potri.002G052500(AS)	POPTR_0002s05340	sp|P80728|MAVI_CUCPE	Mavicyanin OS=Cucurbita pepo PE=1 SV=1	AT5G26330.1	| Symbols: | Cupredoxin superfamily protein | chr5:9241614-9242635 REVERSE LENGTH=187	LOC_Os03g59280.1	protein|plastocyanin-like domain containing protein, putative, expressed	IMGA|Medtr5g006040.1	Early nodulin-like protein chr5 502223-501280 F EGN_Mt100125 20111014	GO:0010413|glucuronoxylan metabolic process GO:0044036|cell wall macromolecule metabolic process GO:0045492|xylan biosynthetic process	GO:0005507|copper ion binding GO:0009055|electron carrier activity	GO:0005886|plasma membrane GO:0031225|anchored to membrane
pt2_05481	A	A1S	Potri.002G052600	Potri.002G052600(AS)	POPTR_0002s05350	sp|Q2MY58|PATA3_SOLTU	Patatin group A-3 OS=Solanum tuberosum PE=2 SV=1	AT3G63200.1	| Symbols: PLP9, PLA IIIB | PATATIN-like protein 9 | chr3:23346140-23347379 FORWARD LENGTH=384	LOC_Os03g57080.1	protein|PLA IIIA/PLP7, putative, expressed	IMGA|Medtr1g095140.1	Patatin-T5 chr1 27183361-27185207 H EGN_Mt100125 20111014	GO:0006629|lipid metabolic process GO:0008152|metabolic process GO:0010075|regulation of meristem growth	GO:0045735|nutrient reservoir activity	GO:0005575|cellular_component GO:0005576|extracellular region
pt2_05482	A	A1S	Potri.002G052700	Potri.002G052700(AS)	POPTR_0002s05360	sp|B9DHT4|ARIA_ARATH	ARM REPEAT PROTEIN INTERACTING WITH ABF2 OS=Arabidopsis thaliana GN=ARIA PE=1 SV=2	AT5G19330.1	| Symbols: ARIA | ARM repeat protein interacting with ABF2 | chr5:6508095-6512701 REVERSE LENGTH=710	LOC_Os05g33050.1	protein|ABTB1 - Armadillo repeats with a Bric-a-Brac, Tramtrack, Broad Complex BTB domain, expressed	IMGA|Medtr1g104870.1	Speckle-type POZ protein-like protein chr1 30898324-30906944 E EGN_Mt100125 20111014	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0009651|response to salt stress GO:0009737|response to abscisic acid stimulus GO:0010187|negative regulation of seed germination	GO:0005515|protein binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005886|plasma membrane
pt2_05483	A	A1S	Potri.002G052800	Potri.002G052800(AS)	POPTR_0002s05370	sp|Q75HV0|CCP31_ORYSJ	Cyclin-P3-1 OS=Oryza sativa subsp. japonica GN=CYCP3-1 PE=3 SV=1	AT3G63120.1	| Symbols: CYCP1;1 | cyclin p1;1 | chr3:23323143-23323893 REVERSE LENGTH=221	LOC_Os05g33040.1	protein|cyclin, putative, expressed	NA	NA	GO:0000079|regulation of cyclin-dependent protein kinase activity GO:0010440|stomatal lineage progression GO:0051726|regulation of cell cycle	GO:0004693|cyclin-dependent protein kinase activity GO:0019901|protein kinase binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05484	A	A1S	Potri.002G052800	Potri.002G052800(AS)	POPTR_0002s05370	sp|Q75HV0|CCP31_ORYSJ	Cyclin-P3-1 OS=Oryza sativa subsp. japonica GN=CYCP3-1 PE=3 SV=1	AT3G63120.1	| Symbols: CYCP1;1 | cyclin p1;1 | chr3:23323143-23323893 REVERSE LENGTH=221	LOC_Os05g33040.1	protein|cyclin, putative, expressed	NA	NA	GO:0000079|regulation of cyclin-dependent protein kinase activity GO:0010440|stomatal lineage progression GO:0051726|regulation of cell cycle	GO:0004693|cyclin-dependent protein kinase activity GO:0019901|protein kinase binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05485	A	A1S	Potri.002G052800	Potri.002G052800(AS)	POPTR_0002s05370	sp|Q75HV0|CCP31_ORYSJ	Cyclin-P3-1 OS=Oryza sativa subsp. japonica GN=CYCP3-1 PE=3 SV=1	AT3G63120.1	| Symbols: CYCP1;1 | cyclin p1;1 | chr3:23323143-23323893 REVERSE LENGTH=221	LOC_Os05g33040.1	protein|cyclin, putative, expressed	NA	NA	GO:0000079|regulation of cyclin-dependent protein kinase activity GO:0010440|stomatal lineage progression GO:0051726|regulation of cell cycle	GO:0004693|cyclin-dependent protein kinase activity GO:0019901|protein kinase binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05486	A	A2S	Potri.002G052900	Potri.002G052900(AS) Potri.005G209600(BS)	POPTR_0002s05380	sp|Q9LE82|RAGP1_ARATH	RAN GTPase-activating protein 1 OS=Arabidopsis thaliana GN=RANGAP1 PE=1 SV=1	AT3G63130.2	| Symbols: RANGAP1 | RAN GTPase activating protein 1 | chr3:23325108-23326715 FORWARD LENGTH=535	LOC_Os05g46560.1	protein|RAN GTPase-activating protein 1, putative, expressed	IMGA|Medtr5g035590.1	Nucleotide-binding oligomerization domain-containing protein chr5 15064604-15056312 F EGN_Mt100125 20111014	GO:0000280|nuclear division GO:0006346|methylation-dependent chromatin silencing GO:0006406|mRNA export from nucleus GO:0006606|protein import into nucleus GO:0006913|nucleocytoplasmic transport GO:0007000|nucleolus organization GO:0009407|toxin catabolic process GO:0031048|chromatin silencing by small RNA GO:0048527|lateral root development GO:0051567|histone H3-K9 methylation	GO:0005098|RAN GTPase activator activity GO:0005515|protein binding	GO:0005634|nucleus GO:0005635|nuclear envelope GO:0005886|plasma membrane GO:0009504|cell plate GO:0009507|chloroplast GO:0032153|cell division site
pt2_05487	A	A1S	Potri.002G052900	Potri.002G052900(AS)	POPTR_0002s05380	sp|Q9LE82|RAGP1_ARATH	RAN GTPase-activating protein 1 OS=Arabidopsis thaliana GN=RANGAP1 PE=1 SV=1	AT3G63130.2	| Symbols: RANGAP1 | RAN GTPase activating protein 1 | chr3:23325108-23326715 FORWARD LENGTH=535	LOC_Os05g46560.1	protein|RAN GTPase-activating protein 1, putative, expressed	IMGA|Medtr5g035590.1	Nucleotide-binding oligomerization domain-containing protein chr5 15064604-15056312 F EGN_Mt100125 20111014	GO:0000280|nuclear division GO:0006346|methylation-dependent chromatin silencing GO:0006406|mRNA export from nucleus GO:0006606|protein import into nucleus GO:0006913|nucleocytoplasmic transport GO:0007000|nucleolus organization GO:0009407|toxin catabolic process GO:0031048|chromatin silencing by small RNA GO:0048527|lateral root development GO:0051567|histone H3-K9 methylation	GO:0005098|RAN GTPase activator activity GO:0005515|protein binding	GO:0005634|nucleus GO:0005635|nuclear envelope GO:0005886|plasma membrane GO:0009504|cell plate GO:0009507|chloroplast GO:0032153|cell division site
pt2_05488	A	A1S	Potri.002G052900	Potri.002G052900(AS)	POPTR_0002s05380	sp|Q9LE82|RAGP1_ARATH	RAN GTPase-activating protein 1 OS=Arabidopsis thaliana GN=RANGAP1 PE=1 SV=1	AT3G63130.2	| Symbols: RANGAP1 | RAN GTPase activating protein 1 | chr3:23325108-23326715 FORWARD LENGTH=535	LOC_Os05g46560.1	protein|RAN GTPase-activating protein 1, putative, expressed	IMGA|Medtr5g035590.1	Nucleotide-binding oligomerization domain-containing protein chr5 15064604-15056312 F EGN_Mt100125 20111014	GO:0000280|nuclear division GO:0006346|methylation-dependent chromatin silencing GO:0006406|mRNA export from nucleus GO:0006606|protein import into nucleus GO:0006913|nucleocytoplasmic transport GO:0007000|nucleolus organization GO:0009407|toxin catabolic process GO:0031048|chromatin silencing by small RNA GO:0048527|lateral root development GO:0051567|histone H3-K9 methylation	GO:0005098|RAN GTPase activator activity GO:0005515|protein binding	GO:0005634|nucleus GO:0005635|nuclear envelope GO:0005886|plasma membrane GO:0009504|cell plate GO:0009507|chloroplast GO:0032153|cell division site
pt2_05489	A	A1S	Potri.002G053000	Potri.002G053000(AS)	POPTR_0002s05390	sp|Q9LYA9|CP41A_ARATH	Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic OS=Arabidopsis thaliana GN=CSP41A PE=1 SV=1	AT3G63140.1	| Symbols: CSP41A | chloroplast stem-loop binding protein of 41 kDa | chr3:23327006-23328620 REVERSE LENGTH=406	LOC_Os07g11110.1	protein|NAD dependent epimerase/dehydratase family protein, putative, expressed	IMGA|Medtr1g072260.2	MRNA-binding protein chr1 18053071-18050851 F EGN_Mt100125 20111014	GO:0006098|pentose-phosphate shunt GO:0006364|rRNA processing GO:0009637|response to blue light GO:0009657|plastid organization GO:0009965|leaf morphogenesis GO:0010114|response to red light GO:0010207|photosystem II assembly GO:0010218|response to far red light GO:0015979|photosynthesis GO:0015995|chlorophyll biosynthetic process GO:0019684|photosynthesis, light reaction GO:0030154|cell differentiation GO:0032544|plastid translation GO:0045727|positive regulation of translation GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003729|mRNA binding GO:0005515|protein binding GO:0008266|poly(U) RNA binding	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009570|chloroplast stroma GO:0009579|thylakoid GO:0009941|chloroplast envelope GO:0010287|plastoglobule GO:0048046|apoplast
pt2_05490	A	A1S	Potri.002G053100	Potri.002G053100(AS)	POPTR_0002s05400	NA	NA	AT4G02800.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01970.1); Has 3209 Blast hits to 2720 proteins in 308 species: Archae - 13; Bacteria - 213; Metazoa - 1207; Fungi - 247; Plants - 183; Viruses - 21; Other Eukaryotes - 1325 (source: NCBI BLink). | chr4:1250126-1251478 FORWARD LENGTH=333	LOC_Os04g15800.1	protein|expressed protein	NA	NA	GO:0000226|microtubule cytoskeleton organization GO:0008150|biological_process GO:0016572|histone phosphorylation GO:0042127|regulation of cell proliferation	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_05491	C	C1S	Potri.002G053200	Potri.002G053200(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05492	A	A1S	Potri.002G053300	Potri.002G053300(AS)	POPTR_0002s05420	NA	NA	AT1G03160.1	| Symbols: FZL | FZO-like | chr1:761321-766053 FORWARD LENGTH=912	LOC_Os05g32390.1	protein|FZL, putative, expressed	NA	NA	GO:0006364|rRNA processing GO:0009228|thiamine biosynthetic process GO:0009793|embryo development ending in seed dormancy GO:0009902|chloroplast relocation GO:0010027|thylakoid membrane organization GO:0010207|photosystem II assembly GO:0010228|vegetative to reproductive phase transition of meristem GO:0015979|photosynthesis GO:0016226|iron-sulfur cluster assembly GO:0034660|ncRNA metabolic process GO:0035304|regulation of protein dephosphorylation GO:0042793|transcription from plastid promoter GO:0045893|positive regulation of transcription, DNA-dependent GO:0048481|ovule development	GO:0003924|GTPase activity GO:0004789|thiamine-phosphate diphosphorylase activity GO:0005525|GTP binding	GO:0009507|chloroplast GO:0031969|chloroplast membrane
pt2_05493	A	A1S	Potri.002G053400	Potri.002G053400(AS)	POPTR_0002s05430	sp|Q9SY06|FAF1_ARATH	Protein FANTASTIC FOUR 1 OS=Arabidopsis thaliana GN=FAF1 PE=2 SV=1	AT4G02810.1	| Symbols: | Protein of unknown function (DUF3049) | chr4:1256253-1257068 FORWARD LENGTH=271	NA	NA	IMGA|Medtr5g005770.1	hypothetical protein chr5 373314-372331 E EGN_Mt100125 20111014	GO:0010075|regulation of meristem growth	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05494	A	A1S	Potri.002G053500	Potri.002G053500(AS)	POPTR_0002s05440	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006499|N-terminal protein myristoylation GO:0007264|small GTPase mediated signal transduction GO:0009737|response to abscisic acid stimulus GO:0015031|protein transport GO:0019725|cellular homeostasis	GO:0003924|GTPase activity GO:0005509|calcium ion binding GO:0005525|GTP binding	GO:0005622|intracellular GO:0005739|mitochondrion GO:0005741|mitochondrial outer membrane
pt2_05495	D	D1S	Potri.005G209000	Potri.005G209000(DS)	POPTR_0002s05450	sp|P0CO78|GEM1_CRYNJ	Mitochondrial Rho GTPase 1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=GEM1 PE=3 SV=1	AT3G63150.1	| Symbols: MIRO2, ATCBG | MIRO-related GTP-ase 2 | chr3:23329200-23332692 REVERSE LENGTH=643	LOC_Os03g59590.1	protein|ATP/GTP/Ca++ binding protein, putative, expressed	IMGA|Medtr5g040690.1	Mitochondrial Rho GTPase chr5 17469987-17461158 H EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0007264|small GTPase mediated signal transduction GO:0009737|response to abscisic acid stimulus GO:0015031|protein transport GO:0019725|cellular homeostasis	GO:0003924|GTPase activity GO:0005509|calcium ion binding GO:0005525|GTP binding	GO:0005622|intracellular GO:0005739|mitochondrion GO:0005741|mitochondrial outer membrane
pt2_05496	A	A1S	Potri.002G053700	Potri.002G053700(AS)	POPTR_0002s05470	NA	NA	AT4G02830.1	| Symbols: | unknown protein; Has 74 Blast hits to 74 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:1262447-1263932 FORWARD LENGTH=184	LOC_Os01g63050.1	protein|expressed protein	IMGA|Medtr5g081460.1	hypothetical protein chr5 33874585-33876737 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05497	A	A1S	Potri.002G053800	Potri.002G053800(AS)	POPTR_0002s05480	NA	NA	AT1G03180.1	| Symbols: | unknown protein; Has 36 Blast hits to 36 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:773543-775179 FORWARD LENGTH=265	LOC_Os05g16250.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005739|mitochondrion
pt2_05498	A	A1S	Potri.002G053900	Potri.002G053900(AS)	POPTR_0002s05490	sp|F4IQV7|SCY2_ARATH	Preprotein translocase subunit SCY2, chloroplastic OS=Arabidopsis thaliana GN=SCY2 PE=2 SV=1	AT2G31530.1	| Symbols: EMB2289, SCY2 | SecY protein transport family protein | chr2:13427060-13430308 FORWARD LENGTH=575	LOC_Os05g33020.1	protein|preprotein translocase subunit secY, putative, expressed	NA	NA	GO:0006354|DNA-dependent transcription, elongation GO:0009220|pyrimidine ribonucleotide biosynthetic process GO:0009306|protein secretion GO:0009793|embryo development ending in seed dormancy GO:0015031|protein transport	GO:0015450|P-P-bond-hydrolysis-driven protein transmembrane transporter activity	GO:0005886|plasma membrane GO:0009526|plastid envelope GO:0016020|membrane
pt2_05499	A	A1S	Potri.002G054000	Potri.002G054000(AS)	POPTR_0002s05500	sp|Q8W4M7|ERCC2_ARATH	DNA repair helicase UVH6 OS=Arabidopsis thaliana GN=UVH6 PE=1 SV=1	AT1G03190.2	| Symbols: ATXPD, UVH6 | RAD3-like DNA-binding helicase protein | chr1:775822-779863 FORWARD LENGTH=758	LOC_Os05g05260.1	protein|helicase, putative, expressed	NA	NA	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0000724|double-strand break repair via homologous recombination GO:0006139|nucleobase-containing compound metabolic process GO:0006281|DNA repair GO:0006289|nucleotide-excision repair GO:0006355|regulation of transcription, DNA-dependent GO:0006366|transcription from RNA polymerase II promoter GO:0006457|protein folding GO:0009408|response to heat GO:0009411|response to UV GO:0009644|response to high light intensity GO:0010212|response to ionizing radiation GO:0010286|heat acclimation GO:0042542|response to hydrogen peroxide GO:0043687|post-translational protein modification GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003676|nucleic acid binding GO:0003677|DNA binding GO:0004003|ATP-dependent DNA helicase activity GO:0005515|protein binding GO:0005524|ATP binding GO:0008026|ATP-dependent helicase activity GO:0016817|hydrolase activity, acting on acid anhydrides GO:0016818|hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	GO:0005634|nucleus
pt2_05500	A	A1S	Potri.002G054100	Potri.002G054100(AS)	POPTR_0002s05510	sp|Q9FT81|TT8_ARATH	Transcription factor TT8 OS=Arabidopsis thaliana GN=TT8 PE=1 SV=2	AT4G09820.1	| Symbols: TT8, BHLH42 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr4:6182067-6186261 FORWARD LENGTH=518	LOC_Os07g11020.1	protein|rc - bHLH transcription factor regulating proanthocyanidin production in seeds, expressed	IMGA|Medtr1g072320.1	Transcription factor TT8 chr1 18090629-18083194 H EGN_Mt100125 20111014	GO:0009718|anthocyanin-containing compound biosynthetic process GO:0009744|response to sucrose stimulus GO:0009962|regulation of flavonoid biosynthetic process GO:0010026|trichome differentiation GO:0010224|response to UV-B GO:2000029|regulation of proanthocyanidin biosynthetic process	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_05501	A	A1S	Potri.002G054200	Potri.002G054200(AS)	POPTR_0002s05520	sp|Q6XKE6|POLG_PVCV2	Genome polyprotein OS=Petunia vein clearing virus (isolate Hohn) PE=3 SV=1	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05502	A	A1S	Potri.002G054300	Potri.002G054300(AS)	POPTR_0002s05530	sp|Q9LS23|ALMTD_ARATH	Aluminum-activated malate transporter 13 OS=Arabidopsis thaliana GN=ALMT13 PE=2 SV=1	AT5G46600.1	| Symbols: | Aluminium activated malate transporter family protein | chr5:18907849-18910742 REVERSE LENGTH=539	LOC_Os10g42180.1	protein|aluminum-activated malate transporter, putative, expressed	IMGA|Medtr5g014310.1	hypothetical protein chr5 4526352-4523171 H EGN_Mt100125 20111014	GO:0010044|response to aluminum ion	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005886|plasma membrane
pt2_05503	A	A1S	Potri.002G054400	Potri.002G054400(AS)	POPTR_0002s05540	NA	NA	AT5G19160.1	| Symbols: TBL11 | TRICHOME BIREFRINGENCE-LIKE 11 | chr5:6430725-6432456 FORWARD LENGTH=464	LOC_Os11g05080.1	protein|powdery mildew resistant protein 5, putative, expressed	IMGA|Medtr5g033800.1	hypothetical protein chr5 14162416-14157608 E EGN_Mt100125 20111014	GO:0007623|circadian rhythm GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05504	A	A1S	Potri.002G054500	Potri.002G054500(AS)	POPTR_0002s05550	sp|Q9XIN8|FB119_ARATH	F-box protein At2g27310 OS=Arabidopsis thaliana GN=At2g27310 PE=2 SV=1	AT2G27310.1	| Symbols: | F-box family protein | chr2:11683954-11684967 REVERSE LENGTH=337	NA	NA	IMGA|contig_239060_1.1	F-box family protein contig_239060 494-3039 H PREDN 20111014	GO:0002679|respiratory burst involved in defense response GO:0008150|biological_process GO:0009414|response to water deprivation GO:0009693|ethylene biosynthetic process GO:0009723|response to ethylene stimulus GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009873|ethylene mediated signaling pathway GO:0010200|response to chitin GO:0010286|heat acclimation GO:0035556|intracellular signal transduction GO:0042538|hyperosmotic salinity response	GO:0003674|molecular_function	NA
pt2_05505	A	A1S	Potri.002G054700	Potri.002G054700(AS)	POPTR_0002s05560	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0031359|integral to chloroplast outer membrane
pt2_05506	A	A1S	Potri.002G054800	Potri.002G054800(AS)	POPTR_0002s05570	sp|P62315|SMD1_MOUSE	Small nuclear ribonucleoprotein Sm D1 OS=Mus musculus GN=Snrpd1 PE=2 SV=1	AT3G07590.2	| Symbols: | Small nuclear ribonucleoprotein family protein | chr3:2423146-2423958 FORWARD LENGTH=114	LOC_Os04g39444.1	protein|LSM domain containing protein, expressed	NA	NA	GO:0001510|RNA methylation	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005730|nucleolus GO:0005732|small nucleolar ribonucleoprotein complex GO:0005774|vacuolar membrane GO:0016020|membrane
pt2_05507	A	A1S	Potri.002G054900	Potri.002G054900(AS)	POPTR_0002s05580	sp|P13917|7SB1_SOYBN	Basic 7S globulin OS=Glycine max GN=BG PE=1 SV=2	AT1G03220.1	| Symbols: | Eukaryotic aspartyl protease family protein | chr1:787143-788444 FORWARD LENGTH=433	LOC_Os05g33410.1	protein|xylanase inhibitor, putative, expressed	IMGA|Medtr1g072450.1	Basic 7S globulin chr1 18135744-18134176 F EGN_Mt100125 20111014	GO:0006508|proteolysis GO:0009651|response to salt stress	GO:0004190|aspartic-type endopeptidase activity	GO:0005576|extracellular region GO:0005618|cell wall GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0009505|plant-type cell wall GO:0009506|plasmodesma GO:0016020|membrane
pt2_05508	A	A1S	Potri.002G055000	Potri.002G055000(AS)	POPTR_0002s05590	sp|Q9ZTX8|ARFF_ARATH	Auxin response factor 6 OS=Arabidopsis thaliana GN=ARF6 PE=2 SV=2	AT1G30330.1	| Symbols: ARF6 | auxin response factor 6 | chr1:10686125-10690036 REVERSE LENGTH=933	LOC_Os06g46410.1	protein|auxin response factor, putative, expressed	IMGA|Medtr5g076270.1	Auxin response factor chr5 31499972-31490689 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009725|response to hormone stimulus GO:0009733|response to auxin stimulus GO:0009855|determination of bilateral symmetry GO:0009886|post-embryonic morphogenesis GO:0009887|organ morphogenesis GO:0009908|flower development GO:0009909|regulation of flower development GO:0010051|xylem and phloem pattern formation GO:0010154|fruit development GO:0048439|flower morphogenesis GO:0048481|ovule development GO:0048507|meristem development GO:0048519|negative regulation of biological process	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_05509	A	A1S	Potri.002G055100	Potri.002G055100(AS)	POPTR_0002s05600	sp|Q9LYT3|TT12_ARATH	Protein TRANSPARENT TESTA 12 OS=Arabidopsis thaliana GN=TT12 PE=2 SV=1	AT3G59030.1	| Symbols: TT12, ATTT12 | MATE efflux family protein | chr3:21819124-21821288 FORWARD LENGTH=507	LOC_Os12g42130.1	protein|MATE efflux family protein, putative, expressed	IMGA|Medtr5g090290.1	Protein TRANSPARENT TESTA chr5 38276426-38279286 H EGN_Mt100125 20111014	GO:0006855|drug transmembrane transport GO:0006863|purine nucleobase transport GO:0010023|proanthocyanidin biosynthetic process GO:0010231|maintenance of seed dormancy GO:0055085|transmembrane transport	GO:0005215|transporter activity GO:0015238|drug transmembrane transporter activity GO:0015297|antiporter activity GO:0015299|solute:hydrogen antiporter activity GO:0022857|transmembrane transporter activity	GO:0005886|plasma membrane GO:0009705|plant-type vacuole membrane GO:0016020|membrane
pt2_05510	A	A1S	Potri.002G055200	Potri.002G055200(AS)	POPTR_0002s05610	sp|Q8BGB2|TTC7A_MOUSE	Tetratricopeptide repeat protein 7A OS=Mus musculus GN=Ttc7a PE=1 SV=1	AT2G43040.1	| Symbols: NPG1 | tetratricopeptide repeat (TPR)-containing protein | chr2:17896049-17898524 REVERSE LENGTH=704	LOC_Os12g37780.1	protein|tetratricopeptide repeat domain containing protein, expressed	IMGA|Medtr5g026810.1	Calmodulin-binding protein chr5 10826342-10820372 E EGN_Mt100125 20111014	GO:0009846|pollen germination GO:0016132|brassinosteroid biosynthetic process	GO:0005516|calmodulin binding	GO:0005634|nucleus
pt2_05511	A	A2S	Potri.002G055300	Potri.002G055300(AS) Potri.005G207300(DS)	POPTR_0002s05620	sp|Q9SKX5|PAO2_ARATH	Probable polyamine oxidase 2 OS=Arabidopsis thaliana GN=PAO2 PE=2 SV=1	AT2G43020.1	| Symbols: ATPAO2, PAO2 | polyamine oxidase 2 | chr2:17891945-17894440 FORWARD LENGTH=490	LOC_Os04g53190.2	protein|CPuORF12 - conserved peptide uORF-containing transcript, expressed	IMGA|Medtr5g090300.1	Polyamine oxidase chr5 38284608-38279612 F EGN_Mt100125 20111014	GO:0006598|polyamine catabolic process GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009611|response to wounding GO:0009698|phenylpropanoid metabolic process GO:0009737|response to abscisic acid stimulus GO:0009805|coumarin biosynthetic process GO:0042398|cellular modified amino acid biosynthetic process GO:0055114|oxidation-reduction process	GO:0008131|primary amine oxidase activity GO:0046592|polyamine oxidase activity	GO:0005634|nucleus GO:0005777|peroxisome
pt2_05512	A	A1S	Potri.002G055400	Potri.002G055400(AS)	POPTR_0002s05630	sp|Q84LH8|PIF5_ARATH	Transcription factor PIF5 OS=Arabidopsis thaliana GN=PIF5 PE=1 SV=1	AT2G43010.2	| Symbols: PIF4, SRL2, AtPIF4 | phytochrome interacting factor 4 | chr2:17887003-17888823 FORWARD LENGTH=428	LOC_Os12g41650.2	protein|helix-loop-helix DNA-binding domain containing protein, expressed	IMGA|Medtr5g017040.1	Transcription factor SPATULA chr5 5918843-5921342 E EGN_Mt100125 20111014	GO:0000096|sulfur amino acid metabolic process GO:0000165|MAPK cascade GO:0006355|regulation of transcription, DNA-dependent GO:0006546|glycine catabolic process GO:0006612|protein targeting to membrane GO:0006636|unsaturated fatty acid biosynthetic process GO:0006733|oxidoreduction coenzyme metabolic process GO:0006766|vitamin metabolic process GO:0007623|circadian rhythm GO:0008652|cellular amino acid biosynthetic process GO:0009072|aromatic amino acid family metabolic process GO:0009073|aromatic amino acid family biosynthetic process GO:0009106|lipoate metabolic process GO:0009108|coenzyme biosynthetic process GO:0009117|nucleotide metabolic process GO:0009585|red, far-red light phototransduction GO:0009617|response to bacterium GO:0009630|gravitropism GO:0009684|indoleacetic acid biosynthetic process GO:0009693|ethylene biosynthetic process GO:0009695|jasmonic acid biosynthetic process GO:0009704|de-etiolation GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009965|leaf morphogenesis GO:0010017|red or far-red light signaling pathway GO:0010161|red light signaling pathway GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0010600|regulation of auxin biosynthetic process GO:0010928|regulation of auxin mediated signaling pathway GO:0015995|chlorophyll biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019344|cysteine biosynthetic process GO:0019748|secondary metabolic process GO:0019761|glucosinolate biosynthetic process GO:0030003|cellular cation homeostasis GO:0030154|cell differentiation GO:0031348|negative regulation of defense response GO:0035304|regulation of protein dephosphorylation GO:0044272|sulfur compound biosynthetic process GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_05513	A	A1S	Potri.002G055500	Potri.002G055500(AS)	POPTR_0002s05640	sp|Q94A68|Y1669_ARATH	Uncharacterized oxidoreductase At1g06690, chloroplastic OS=Arabidopsis thaliana GN=At1g06690 PE=1 SV=1	AT1G06690.1	| Symbols: | NAD(P)-linked oxidoreductase superfamily protein | chr1:2049742-2052039 REVERSE LENGTH=377	LOC_Os07g05000.1	protein|oxidoreductase, aldo/keto reductase family protein, putative, expressed	NA	NA	GO:0055114|oxidation-reduction process	GO:0004033|aldo-keto reductase (NADP) activity GO:0016491|oxidoreductase activity	GO:0005737|cytoplasm GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009941|chloroplast envelope GO:0010287|plastoglobule
pt2_05514	A	A1S	Potri.002G055600	Potri.002G055600(AS)	POPTR_0002s05650	sp|Q9SS37|RTNLH_ARATH	Reticulon-like protein B8 OS=Arabidopsis thaliana GN=RTNLB8 PE=1 SV=1	AT3G10260.2	| Symbols: | Reticulon family protein | chr3:3171413-3172508 REVERSE LENGTH=247	LOC_Os03g56900.1	protein|reticulon domain containing protein, putative, expressed	IMGA|Medtr5g090340.3	Reticulon-like protein B8 chr5 38304798-38301150 F EGN_Mt100125 20111014	GO:0006612|protein targeting to membrane GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010363|regulation of plant-type hypersensitive response	NA	GO:0005634|nucleus GO:0005739|mitochondrion GO:0005783|endoplasmic reticulum
pt2_05515	A	A2S	Potri.002G055700	Potri.002G055700(AS) Potri.005G206700(DS)	POPTR_0002s05660	sp|Q9SLQ8|PSBP_CUCSA	Oxygen-evolving enhancer protein 2, chloroplastic OS=Cucumis sativus GN=PSBP PE=2 SV=1	AT1G06680.1	| Symbols: PSBP-1, OEE2, PSII-P, OE23 | photosystem II subunit P-1 | chr1:2047940-2049186 FORWARD LENGTH=263	LOC_Os07g04840.1	protein|PsbP, putative, expressed	IMGA|Medtr5g090410.1	Oxygen-evolving enhancer protein chr5 38328310-38332161 E EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0002831|regulation of response to biotic stimulus GO:0006364|rRNA processing GO:0006612|protein targeting to membrane GO:0009409|response to cold GO:0009595|detection of biotic stimulus GO:0009637|response to blue light GO:0009644|response to high light intensity GO:0009657|plastid organization GO:0009697|salicylic acid biosynthetic process GO:0009744|response to sucrose stimulus GO:0009773|photosynthetic electron transport in photosystem I GO:0009814|defense response, incompatible interaction GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010114|response to red light GO:0010155|regulation of proton transport GO:0010200|response to chitin GO:0010207|photosystem II assembly GO:0010218|response to far red light GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0015979|photosynthesis GO:0019344|cysteine biosynthetic process GO:0019684|photosynthesis, light reaction GO:0031348|negative regulation of defense response GO:0042742|defense response to bacterium GO:0043900|regulation of multi-organism process GO:0050832|defense response to fungus	GO:0005509|calcium ion binding GO:0008266|poly(U) RNA binding	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009543|chloroplast thylakoid lumen GO:0009570|chloroplast stroma GO:0009579|thylakoid GO:0009654|oxygen evolving complex GO:0009941|chloroplast envelope GO:0019898|extrinsic to membrane GO:0030095|chloroplast photosystem II GO:0031977|thylakoid lumen GO:0048046|apoplast
pt2_05516	A	A1S	Potri.002G055800	Potri.002G055800(AS)	POPTR_0002s05670	sp|Q28D01|WDR26_XENTR	WD repeat-containing protein 26 OS=Xenopus tropicalis GN=wdr26 PE=2 SV=2	AT5G08560.2	| Symbols: | transducin family protein / WD-40 repeat family protein | chr5:2771104-2773827 REVERSE LENGTH=589	LOC_Os02g19210.1	protein|WD repeat-containing protein, putative, expressed	IMGA|Medtr5g090420.1	WD-repeat protein-like protein chr5 38334682-38338889 E EGN_Mt100125 20111014	GO:0007062|sister chromatid cohesion GO:0007131|reciprocal meiotic recombination GO:0009630|gravitropism GO:0009887|organ morphogenesis GO:0009888|tissue development GO:0010228|vegetative to reproductive phase transition of meristem GO:0010359|regulation of anion channel activity GO:0010413|glucuronoxylan metabolic process GO:0010638|positive regulation of organelle organization GO:0016926|protein desumoylation GO:0031048|chromatin silencing by small RNA GO:0033044|regulation of chromosome organization GO:0042138|meiotic DNA double-strand break formation GO:0045132|meiotic chromosome segregation GO:0045492|xylan biosynthetic process GO:0050665|hydrogen peroxide biosynthetic process	GO:0000166|nucleotide binding	GO:0005737|cytoplasm
pt2_05517	G	G1	NA	NA	POPTR_0002s05680	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05518	C	C1S	Potri.002G056000	Potri.002G056000(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05519	A	A1S	Potri.002G056100	Potri.002G056100(AS)	POPTR_0002s05700	sp|Q40392|TMVRN_NICGU	TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1	AT5G36930.1	| Symbols: | Disease resistance protein (TIR-NBS-LRR class) family | chr5:14567771-14571907 REVERSE LENGTH=1188	LOC_Os01g15580.1	protein|disease resistance protein RGA2, putative, expressed	IMGA|Medtr5g047480.1	TMV resistance protein N chr5 20393921-20398395 H EGN_Mt100125 20111014	GO:0006952|defense response GO:0007165|signal transduction	GO:0043531|ADP binding	GO:0005622|intracellular GO:0005737|cytoplasm
pt2_05520	A	A1S	Potri.002G056200	Potri.002G056200(AS)	POPTR_0002s05710	sp|Q9XHS0|RS12_HORVU	40S ribosomal protein S12 OS=Hordeum vulgare GN=RPS12 PE=2 SV=1	AT2G32060.2	| Symbols: | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | chr2:13639228-13640104 REVERSE LENGTH=144	LOC_Os07g05580.1	protein|ribosomal protein L7Ae, putative, expressed	IMGA|Medtr5g012890.1	40S ribosomal protein S12 chr5 3720346-3721879 F EGN_Mt100125 20111014	GO:0001510|RNA methylation GO:0006412|translation GO:0009853|photorespiration	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005634|nucleus GO:0005840|ribosome GO:0022626|cytosolic ribosome GO:0022627|cytosolic small ribosomal subunit
pt2_05521	A	A1S	Potri.002G056300	Potri.002G056300(AS)	POPTR_0002s05720	sp|Q9LR64|Y1360_ARATH	Thylakoid lumenal protein At1g03610, chloroplastic OS=Arabidopsis thaliana GN=At1g03600 PE=1 SV=1	AT1G03600.1	| Symbols: PSB27 | photosystem II family protein | chr1:898916-899440 FORWARD LENGTH=174	LOC_Os03g21560.1	protein|photosystem II 11 kD protein, putative, expressed	NA	NA	GO:0006364|rRNA processing GO:0009657|plastid organization GO:0010206|photosystem II repair GO:0010207|photosystem II assembly GO:0019684|photosynthesis, light reaction GO:0035304|regulation of protein dephosphorylation	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009543|chloroplast thylakoid lumen GO:0009579|thylakoid GO:0030095|chloroplast photosystem II
pt2_05522	A	A1S	Potri.002G056400	Potri.002G056400(AS)	POPTR_0002s05730	NA	NA	NA	NA	LOC_Os07g06644.2	protein|expressed protein	IMGA|Medtr5g090740.1	hypothetical protein chr5 38465132-38465704 E EGN_Mt100125 20111014	NA	NA	NA
pt2_05523	A	A1S	Potri.002G056500	Potri.002G056500(AS)	POPTR_0002s05740	sp|Q8L746|NPR3_ARATH	Regulatory protein NPR3 OS=Arabidopsis thaliana GN=NPR3 PE=1 SV=1	AT5G45110.1	| Symbols: NPR3, ATNPR3 | NPR1-like protein 3 | chr5:18229319-18231334 FORWARD LENGTH=586	LOC_Os01g56200.1	protein|BTBA2 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed	IMGA|Medtr5g090770.1	NPR1-1 protein chr5 38473405-38477248 F EGN_Mt100125 20111014	GO:0006612|protein targeting to membrane GO:0006944|cellular membrane fusion GO:0009410|response to xenobiotic stimulus GO:0009617|response to bacterium GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process GO:0009816|defense response to bacterium, incompatible interaction GO:0009817|defense response to fungus, incompatible interaction GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010200|response to chitin GO:0010363|regulation of plant-type hypersensitive response GO:0031348|negative regulation of defense response GO:0043069|negative regulation of programmed cell death GO:0045087|innate immune response GO:0050832|defense response to fungus GO:0052542|defense response by callose deposition GO:0080185|effector dependent induction by symbiont of host immune response	GO:0005515|protein binding GO:1901149|salicylic acid binding	NA
pt2_05524	A	A1S	Potri.002G056500	Potri.002G056500(AS)	POPTR_0002s05750	sp|Q8L746|NPR3_ARATH	Regulatory protein NPR3 OS=Arabidopsis thaliana GN=NPR3 PE=1 SV=1	AT5G45110.1	| Symbols: NPR3, ATNPR3 | NPR1-like protein 3 | chr5:18229319-18231334 FORWARD LENGTH=586	LOC_Os01g56200.1	protein|BTBA2 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed	IMGA|Medtr5g090770.1	NPR1-1 protein chr5 38473405-38477248 F EGN_Mt100125 20111014	GO:0006612|protein targeting to membrane GO:0006944|cellular membrane fusion GO:0009410|response to xenobiotic stimulus GO:0009617|response to bacterium GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process GO:0009816|defense response to bacterium, incompatible interaction GO:0009817|defense response to fungus, incompatible interaction GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010200|response to chitin GO:0010363|regulation of plant-type hypersensitive response GO:0031348|negative regulation of defense response GO:0043069|negative regulation of programmed cell death GO:0045087|innate immune response GO:0050832|defense response to fungus GO:0052542|defense response by callose deposition GO:0080185|effector dependent induction by symbiont of host immune response	GO:0005515|protein binding GO:1901149|salicylic acid binding	NA
pt2_05525	A	A1S	Potri.002G056600	Potri.002G056600(AS)	POPTR_0002s05760	sp|Q6PGS5|TM56B_XENLA	Transmembrane protein 56-B OS=Xenopus laevis GN=tmem56-b PE=2 SV=1	AT4G19645.2	| Symbols: | TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein | chr4:10689941-10691298 REVERSE LENGTH=268	LOC_Os05g43540.1	protein|transmembrane protein 56, putative, expressed	IMGA|Medtr5g090550.2	Transmembrane protein 56 chr5 38402638-38399405 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0016021|integral to membrane
pt2_05526	A	A1S	Potri.002G056700	Potri.002G056700(AS)	POPTR_0002s05770	sp|Q700D9|MYBF_ARATH	Putative Myb family transcription factor At1g14600 OS=Arabidopsis thaliana GN=At1g14600 PE=2 SV=2	AT1G14600.1	| Symbols: | Homeodomain-like superfamily protein | chr1:5001185-5003370 REVERSE LENGTH=255	LOC_Os06g45890.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr1g034830.1	Myb family transcription factor APL chr1 9627026-9625219 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_05527	A	A1S	Potri.002G056800	Potri.002G056800(AS)	POPTR_0002s05780	sp|Q9SSU8|PSY_DAUCA	Phytoene synthase, chloroplastic OS=Daucus carota GN=PSY PE=2 SV=1	AT5G17230.2	| Symbols: PSY | PHYTOENE SYNTHASE | chr5:5659839-5662087 REVERSE LENGTH=422	LOC_Os06g51290.2	protein|phytoene synthase, chloroplast precursor, putative, expressed	IMGA|Medtr5g076620.1	Phytoene synthase chr5 31690087-31686764 F EGN_Mt100125 20111014	GO:0006636|unsaturated fatty acid biosynthetic process GO:0006655|phosphatidylglycerol biosynthetic process GO:0009058|biosynthetic process GO:0015995|chlorophyll biosynthetic process GO:0016117|carotenoid biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway	GO:0016740|transferase activity GO:0016765|transferase activity, transferring alkyl or aryl (other than methyl) groups GO:0016767|geranylgeranyl-diphosphate geranylgeranyltransferase activity GO:0046905|phytoene synthase activity	GO:0009507|chloroplast GO:0010287|plastoglobule
pt2_05528	A	A1S	Potri.002G056900	Potri.002G056900(AS)	POPTR_0002s05790	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05529	A	A1S	Potri.002G057000	Potri.002G057000(AS)	POPTR_0002s05800	NA	NA	AT1G06660.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30820.2); Has 166 Blast hits to 144 proteins in 35 species: Archae - 0; Bacteria - 17; Metazoa - 13; Fungi - 20; Plants - 104; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). | chr1:2037461-2040148 REVERSE LENGTH=481	LOC_Os03g56590.1	protein|expressed protein	IMGA|Medtr5g090900.1	hypothetical protein chr5 38555214-38558784 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0007142|male meiosis II GO:0009556|microsporogenesis	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05530	A	A2S	Potri.002G057100	Potri.002G057100(AS) Potri.005G205500(DS)	POPTR_0002s05810	NA	NA	AT4G39235.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:18268514-18269034 FORWARD LENGTH=86	LOC_Os03g51459.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05531	A	A1S	Potri.002G057200	Potri.002G057200(AS)	POPTR_0002s05820	sp|Q9SK55|NAC42_ARATH	NAC domain-containing protein 42 OS=Arabidopsis thaliana GN=NAC042 PE=2 SV=1	AT2G43000.1	| Symbols: anac042, NAC042 | NAC domain containing protein 42 | chr2:17880617-17882584 REVERSE LENGTH=275	LOC_Os03g56580.1	protein|no apical meristem protein, putative, expressed	IMGA|Medtr5g090970.1	NAC domain protein IPR003441 chr5 38593767-38597396 F EGN_Mt100125 20111014	GO:0005992|trehalose biosynthetic process GO:0006561|proline biosynthetic process GO:0007275|multicellular organismal development GO:0009627|systemic acquired resistance GO:0009718|anthocyanin-containing compound biosynthetic process GO:0009723|response to ethylene stimulus GO:0010120|camalexin biosynthetic process GO:0010150|leaf senescence GO:0034976|response to endoplasmic reticulum stress GO:0042538|hyperosmotic salinity response GO:1900056|negative regulation of leaf senescence	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05532	A	A2S	Potri.002G057300	Potri.002G057300(AS) Potri.005G205300(DS)	POPTR_0002s05830	NA	NA	AT2G30880.1	| Symbols: | Pleckstrin homology (PH) domain-containing protein | chr2:13142926-13145718 REVERSE LENGTH=504	LOC_Os03g46340.1	protein|pleckstrin homology domain-containing protein, putative, expressed	IMGA|Medtr5g091000.1	hypothetical protein chr5 38613033-38606689 E EGN_Mt100125 20111014	GO:0007165|signal transduction	GO:0005543|phospholipid binding GO:0035091|phosphatidylinositol binding	GO:0005737|cytoplasm GO:0009505|plant-type cell wall
pt2_05533	A	A1S	Potri.002G057400	Potri.002G057400(AS)	POPTR_0002s05840	sp|P93836|HPPD_ARATH	4-hydroxyphenylpyruvate dioxygenase OS=Arabidopsis thaliana GN=HPD PE=1 SV=2	AT1G06570.1	| Symbols: PDS1, HPD | phytoene desaturation 1 | chr1:2012015-2013543 REVERSE LENGTH=473	LOC_Os02g07160.1	protein|glyoxalase family protein, putative, expressed	IMGA|Medtr5g091060.1	4-hydroxyphenylpyruvate dioxygenase chr5 38640535-38643883 F EGN_Mt100125 20111014	GO:0009072|aromatic amino acid family metabolic process GO:0010189|vitamin E biosynthetic process GO:0010236|plastoquinone biosynthetic process GO:0016117|carotenoid biosynthetic process GO:0055114|oxidation-reduction process	GO:0003868|4-hydroxyphenylpyruvate dioxygenase activity GO:0016701|oxidoreductase activity, acting on single donors with incorporation of molecular oxygen GO:0042802|identical protein binding	GO:0005739|mitochondrion GO:0005829|cytosol GO:0009507|chloroplast
pt2_05534	A	A1S	Potri.002G057400	Potri.002G057400(AS)	POPTR_0002s05850	sp|P93836|HPPD_ARATH	4-hydroxyphenylpyruvate dioxygenase OS=Arabidopsis thaliana GN=HPD PE=1 SV=2	AT1G06570.1	| Symbols: PDS1, HPD | phytoene desaturation 1 | chr1:2012015-2013543 REVERSE LENGTH=473	LOC_Os02g07160.1	protein|glyoxalase family protein, putative, expressed	IMGA|Medtr5g091060.1	4-hydroxyphenylpyruvate dioxygenase chr5 38640535-38643883 F EGN_Mt100125 20111014	GO:0009072|aromatic amino acid family metabolic process GO:0010189|vitamin E biosynthetic process GO:0010236|plastoquinone biosynthetic process GO:0016117|carotenoid biosynthetic process GO:0055114|oxidation-reduction process	GO:0003868|4-hydroxyphenylpyruvate dioxygenase activity GO:0016701|oxidoreductase activity, acting on single donors with incorporation of molecular oxygen GO:0042802|identical protein binding	GO:0005739|mitochondrion GO:0005829|cytosol GO:0009507|chloroplast
pt2_05535	A	A1S	Potri.002G057500	Potri.002G057500(AS)	POPTR_0002s05860	NA	NA	AT1G56150.1	| Symbols: | SAUR-like auxin-responsive protein family | chr1:21017432-21017764 FORWARD LENGTH=110	NA	NA	NA	NA	GO:0009733|response to auxin stimulus	GO:0003674|molecular_function	NA
pt2_05536	A	A2S	Potri.002G057600	Potri.002G057600(AS) Potri.T158800(DS)	POPTR_0002s05870	sp|Q9ATF5|RL18A_CASSA	60S ribosomal protein L18a OS=Castanea sativa GN=RPL18A PE=2 SV=1	AT2G34480.1	| Symbols: | Ribosomal protein L18ae/LX family protein | chr2:14532916-14534161 REVERSE LENGTH=178	LOC_Os05g49030.1	protein|60S ribosomal protein L18a, putative, expressed	IMGA|Medtr5g091120.1	60S ribosomal protein L18a chr5 38668860-38670959 F EGN_Mt100125 20111014	GO:0006412|translation GO:0009664|plant-type cell wall organization GO:0042545|cell wall modification	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005737|cytoplasm GO:0005774|vacuolar membrane GO:0005829|cytosol GO:0005840|ribosome GO:0005886|plasma membrane GO:0022625|cytosolic large ribosomal subunit GO:0022626|cytosolic ribosome
pt2_05537	A	A1S	Potri.002G057700	Potri.002G057700(AS)	POPTR_0002s05880	sp|Q9SHJ8|HIBC8_ARATH	3-hydroxyisobutyryl-CoA hydrolase-like protein 5 OS=Arabidopsis thaliana GN=At1g06550 PE=2 SV=2	AT1G06550.1	| Symbols: | ATP-dependent caseinolytic (Clp) protease/crotonase family protein | chr1:2003834-2006564 REVERSE LENGTH=387	LOC_Os01g54860.1	protein|enoyl-CoA hydratase/isomerase family protein, putative, expressed	IMGA|Medtr1g014040.1	3-hydroxyisobutyryl-CoA hydrolase-like protein chr1 3619461-3610001 F EGN_Mt100125 20111014	GO:0006635|fatty acid beta-oxidation GO:0008152|metabolic process GO:0080167|response to karrikin	GO:0003824|catalytic activity GO:0003860|3-hydroxyisobutyryl-CoA hydrolase activity	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_05538	A	A1S	Potri.002G057800	Potri.002G057800(AS)	POPTR_0002s05890	sp|Q55C58|VPS16_DICDI	Vacuolar protein sorting-associated protein 16 homolog OS=Dictyostelium discoideum GN=vps16 PE=3 SV=2	AT2G38020.1	| Symbols: VCL1, MAN, EMB258 | vacuoleless1 (VCL1) | chr2:15910098-15914190 REVERSE LENGTH=858	LOC_Os01g47650.1	protein|vacuolar protein sorting-associated protein 16, putative, expressed	NA	NA	GO:0006486|protein glycosylation GO:0006487|protein N-linked glycosylation GO:0006623|protein targeting to vacuole GO:0006886|intracellular protein transport GO:0007030|Golgi organization GO:0007033|vacuole organization GO:0010228|vegetative to reproductive phase transition of meristem GO:0010413|glucuronoxylan metabolic process GO:0016926|protein desumoylation GO:0045492|xylan biosynthetic process GO:0050665|hydrogen peroxide biosynthetic process	GO:0003674|molecular_function	GO:0005622|intracellular GO:0009705|plant-type vacuole membrane
pt2_05539	A	A1S	Potri.002G057900	Potri.002G057900(AS)	POPTR_0002s05900	NA	NA	AT2G30890.1	| Symbols: | Cytochrome b561/ferric reductase transmembrane protein family | chr2:13147774-13149663 FORWARD LENGTH=257	LOC_Os05g49040.1	protein|expressed protein	NA	NA	NA	NA	GO:0009507|chloroplast GO:0016020|membrane GO:0016021|integral to membrane
pt2_05540	A	A1S	Potri.002G058000	Potri.002G058000(AS)	POPTR_0002s05910	NA	NA	AT2G42975.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; Has 32 Blast hits to 32 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:17873998-17874820 FORWARD LENGTH=187	LOC_Os01g47630.1	protein|expressed protein	IMGA|Medtr5g091190.1	hypothetical protein chr5 38701913-38700519 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane
pt2_05541	A	A1S	Potri.002G058100	Potri.002G058100(AS)	POPTR_0002s05920	sp|Q680C0|GDL62_ARATH	GDSL esterase/lipase At4g10955 OS=Arabidopsis thaliana GN=At4g10955 PE=2 SV=1	AT5G50890.1	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr5:20702684-20704235 FORWARD LENGTH=408	LOC_Os01g54810.1	protein|lipase, putative, expressed	IMGA|Medtr5g091200.1	GDSL esterase/lipase chr5 38706265-38708578 E EGN_Mt100125 20111014	NA	NA	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05542	A	A1S	Potri.002G058200	Potri.002G058200(AS)	POPTR_0002s05930	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05543	A	A1S	Potri.002G058300	Potri.002G058300(AS)	POPTR_0002s05940	sp|Q9UP83|COG5_HUMAN	Conserved oligomeric Golgi complex subunit 5 OS=Homo sapiens GN=COG5 PE=1 SV=3	AT1G67930.1	| Symbols: | Golgi transport complex protein-related | chr1:25474218-25477332 REVERSE LENGTH=832	LOC_Os05g31490.1	protein|golgi transport complex protein-related, putative, expressed	IMGA|Medtr5g091250.1	Conserved oligomeric Golgi complex subunit chr5 38733861-38728557 E EGN_Mt100125 20111014	NA	NA	GO:0005829|cytosol GO:0009507|chloroplast
pt2_05544	A	A1S	Potri.002G058400	Potri.002G058400(AS)	POPTR_0002s05950	NA	NA	AT1G06475.1	| Symbols: | unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr1:1973992-1974273 REVERSE LENGTH=93	NA	NA	IMGA|Medtr5g091310.1	hypothetical protein chr5 38756522-38756110 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0016020|membrane
pt2_05545	A	A1S	Potri.002G058500	Potri.002G058500(AS)	POPTR_0002s05960	NA	NA	AT3G59090.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana protein match is: tobamovirus multiplication 1 (TAIR:AT4G21790.1); Has 196 Blast hits to 195 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 188; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). | chr3:21839334-21842348 FORWARD LENGTH=367	LOC_Os01g54784.1	protein|expressed protein	IMGA|Medtr5g091370.1	hypothetical protein chr5 38781341-38785944 E EGN_Mt100125 20111014	GO:0006635|fatty acid beta-oxidation GO:0016558|protein import into peroxisome matrix	NA	GO:0009507|chloroplast
pt2_05546	A	A1S	Potri.002G058700	Potri.002G058700(AS)	POPTR_0002s05970	sp|Q9SHJ3|CALS7_ARATH	Callose synthase 7 OS=Arabidopsis thaliana GN=CALS7 PE=2 SV=3	AT1G06490.1	| Symbols: ATGSL07, gsl07, atgsl7, GSL7 | glucan synthase-like 7 | chr1:1978762-1989295 FORWARD LENGTH=1958	LOC_Os03g03610.1	protein|1,3-beta-glucan synthase component domain containing protein, expressed	IMGA|AC235753_1023.1	Callose synthase AC235753.2 124305-113042 E EGN_Mt100125 20111014	GO:0006075|(1->3)-beta-D-glucan biosynthetic process GO:0006944|cellular membrane fusion GO:0009556|microsporogenesis GO:0010233|phloem transport GO:0052543|callose deposition in cell wall GO:0080165|callose deposition in phloem sieve plate	GO:0003843|1,3-beta-D-glucan synthase activity GO:0016757|transferase activity, transferring glycosyl groups	GO:0000148|1,3-beta-D-glucan synthase complex GO:0005886|plasma membrane GO:0016020|membrane
pt2_05547	A	A1S	Potri.002G058800	Potri.002G058800(AS)	POPTR_0002s05980	NA	NA	AT1G06500.4	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 25 Blast hits to 25 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:1990176-1990586 FORWARD LENGTH=136	LOC_Os01g14420.1	protein|RWP-RK domain-containing protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_05548	A	A1S	Potri.002G059000	Potri.002G059000(AS)	POPTR_0002s05990	sp|Q9SJG2|Y2296_ARATH	Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1	AT3G59110.1	| Symbols: | Protein kinase superfamily protein | chr3:21855673-21857847 FORWARD LENGTH=512	LOC_Os10g35450.1	protein|serine/threonine-protein kinase, putative, expressed	IMGA|Medtr5g091380.1	Receptor-like protein kinase chr5 38787608-38791507 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0046777|protein autophosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_05549	A	A1S	Potri.002G059100	Potri.002G059100(AS)	POPTR_0002s06000	sp|Q8VWJ2|WRK28_ARATH	Probable WRKY transcription factor 28 OS=Arabidopsis thaliana GN=WRKY28 PE=2 SV=1	AT4G18170.1	| Symbols: WRKY28, ATWRKY28 | WRKY DNA-binding protein 28 | chr4:10061508-10062691 FORWARD LENGTH=318	LOC_Os01g47560.1	protein|WRKY16, expressed	IMGA|Medtr5g091390.1	WRKY transcription factor chr5 38797564-38795236 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006865|amino acid transport GO:0009407|toxin catabolic process GO:0010583|response to cyclopentenone	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_05550	A	A1S	Potri.002G059200	Potri.002G059200(AS)	POPTR_0002s06010	sp|Q69TN4|KCO3_ORYSJ	Two pore potassium channel c OS=Oryza sativa subsp. japonica GN=TPKC PE=3 SV=1	AT4G18160.1	| Symbols: KCO6, ATTPK3, ATKCO6, TPK3 | Ca2+ activated outward rectifying K+ channel 6 | chr4:10055696-10057546 FORWARD LENGTH=436	LOC_Os09g12790.1	protein|potassium channel protein, putative, expressed	IMGA|Medtr5g095650.1	Outward rectifying potassium channel chr5 40770179-40772279 E EGN_Mt100125 20111014	GO:0071805|potassium ion transmembrane transport	GO:0005267|potassium channel activity GO:0015271|outward rectifier potassium channel activity	GO:0009705|plant-type vacuole membrane GO:0016020|membrane
pt2_05551	A	A1S	Potri.002G059300	Potri.002G059300(AS)	POPTR_0002s06020	NA	NA	AT1G29350.1	| Symbols: | Kinase-related protein of unknown function (DUF1296) | chr1:10268761-10273613 REVERSE LENGTH=831	LOC_Os01g47430.2	protein|protein of unknown function DUF1296 domain containing protein, expressed	IMGA|Medtr5g096290.1	hypothetical protein chr5 41060656-41068633 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05552	A	A1S	Potri.002G059400	Potri.002G059400(AS)	POPTR_0002s06030	sp|Q9S7C9|ESCA_ARATH	Putative DNA-binding protein ESCAROLA OS=Arabidopsis thaliana GN=ESC PE=2 SV=1	AT2G42940.1	| Symbols: | Predicted AT-hook DNA-binding family protein | chr2:17862497-17863270 REVERSE LENGTH=257	LOC_Os02g25020.1	protein|DNA binding protein, putative, expressed	IMGA|Medtr5g091630.1	hypothetical protein chr5 38920717-38921481 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003677|DNA binding	GO:0005634|nucleus
pt2_05553	R	R	NA	NA	POPTR_0002s06040	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05554	B	B1S	Potri.002G059600	Potri.002G059600(BS)	POPTR_0002s06050	sp|O65399|E131_ARATH	Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana GN=At1g11820 PE=1 SV=3	AT2G30933.1	| Symbols: | Carbohydrate-binding X8 domain superfamily protein | chr2:13164179-13166517 REVERSE LENGTH=227	LOC_Os01g44090.1	protein|X8 domain containing protein, expressed	IMGA|Medtr5g091650.1	"Glucan endo-1,3-beta-glucosidase-like protein" chr5 38927441-38930905 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005886|plasma membrane
pt2_05555	A	A2S	Potri.002G059700	Potri.002G059700(AS) Potri.005G202100(DS)	POPTR_0002s06060	sp|Q9XGA1|KPRS4_SPIOL	Ribose-phosphate pyrophosphokinase 4 OS=Spinacia oleracea GN=PRS4 PE=2 SV=1	AT2G42910.1	| Symbols: | Phosphoribosyltransferase family protein | chr2:17856396-17858394 FORWARD LENGTH=337	LOC_Os02g48390.1	protein|phosphoribosyl transferase, putative, expressed	IMGA|Medtr5g075540.1	Ribose-phosphate pyrophosphokinase chr5 31127139-31121704 F EGN_Mt100125 20111014	GO:0006783|heme biosynthetic process GO:0009116|nucleoside metabolic process GO:0009165|nucleotide biosynthetic process GO:0009220|pyrimidine ribonucleotide biosynthetic process	GO:0000287|magnesium ion binding GO:0004749|ribose phosphate diphosphokinase activity	GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_05556	A	A1S	Potri.002G059800	Potri.002G059800(AS)	POPTR_0002s06070	sp|Q6ZI17|OML2_ORYSJ	Protein MEI2-like 2 OS=Oryza sativa subsp. japonica GN=ML2 PE=2 SV=1	AT1G29400.2	| Symbols: AML5, ML5 | MEI2-like protein 5 | chr1:10290393-10293696 REVERSE LENGTH=800	LOC_Os02g48790.3	protein|AML1, putative, expressed	IMGA|Medtr5g068540.1	Protein terminal ear1 chr5 28030406-28026385 H EGN_Mt100125 20111014	GO:0006635|fatty acid beta-oxidation GO:0016558|protein import into peroxisome matrix GO:0045836|positive regulation of meiosis GO:0045927|positive regulation of growth	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005634|nucleus
pt2_05557	A	A1S	Potri.002G059900	Potri.002G059900(AS)	POPTR_0002s06080	sp|Q9SJG9|MPK20_ARATH	Mitogen-activated protein kinase 20 OS=Arabidopsis thaliana GN=MPK20 PE=1 SV=2	AT2G42880.1	| Symbols: ATMPK20, MPK20 | MAP kinase 20 | chr2:17840572-17843947 REVERSE LENGTH=606	LOC_Os01g43910.1	protein|CGMC_MAPKCMGC_2.4 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	IMGA|Medtr5g091680.1	Mitogen activated protein kinase 20-1 chr5 38953398-38958773 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0007165|signal transduction GO:0009664|plant-type cell wall organization GO:0010075|regulation of meristem growth	GO:0004672|protein kinase activity GO:0004707|MAP kinase activity GO:0005515|protein binding GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus
pt2_05558	A	A1S	Potri.002G060100	Potri.002G060100(AS)	POPTR_0002s06090	NA	NA	AT3G58850.1	| Symbols: PAR2, HLH2 | phy rapidly regulated 2 | chr3:21759562-21759918 REVERSE LENGTH=118	LOC_Os01g43950.1	protein|expressed protein	IMGA|Medtr5g091690.1	hypothetical protein chr5 38966646-38967429 E EGN_Mt100125 20111014	GO:0007623|circadian rhythm GO:0009641|shade avoidance GO:0032502|developmental process	NA	GO:0005634|nucleus
pt2_05559	A	A1S	Potri.002G060200	Potri.002G060200(AS)	POPTR_0002s06100	NA	NA	AT1G06530.1	| Symbols: | Tropomyosin-related | chr1:2001625-2002596 FORWARD LENGTH=323	NA	NA	NA	NA	GO:0007005|mitochondrion organization	NA	GO:0005739|mitochondrion GO:0005774|vacuolar membrane GO:0009536|plastid GO:0031307|integral to mitochondrial outer membrane
pt2_05560	A	A1S	Potri.002G060300	Potri.002G060300(AS)	POPTR_0002s06110	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05561	G	G1	NA	NA	POPTR_0002s06120	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05562	A	A3S	Potri.002G060500	Potri.002G060500(AS) Potri.005G201200(DS) Potri.002G060400(DS)	POPTR_0002s06130	sp|Q38911|XTH15_ARATH	Probable xyloglucan endotransglucosylase/hydrolase protein 15 OS=Arabidopsis thaliana GN=XTH15 PE=1 SV=1	AT4G14130.1	| Symbols: XTR7, XTH15 | xyloglucan endotransglucosylase/hydrolase 15 | chr4:8137161-8138196 REVERSE LENGTH=289	LOC_Os06g48160.1	protein|glycosyl hydrolases family 16, putative, expressed	IMGA|Medtr5g091730.1	Xyloglucan endotransglucosylase/hydrolase chr5 38992618-38991125 E EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0006073|cellular glucan metabolic process GO:0006499|N-terminal protein myristoylation	GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0016762|xyloglucan:xyloglucosyl transferase activity GO:0016798|hydrolase activity, acting on glycosyl bonds	GO:0005576|extracellular region GO:0005618|cell wall GO:0048046|apoplast
pt2_05563	A	A1S	Potri.002G060600	Potri.002G060600(AS)	POPTR_0002s06140	NA	NA	AT3G58830.1	| Symbols: | haloacid dehalogenase (HAD) superfamily protein | chr3:21755172-21756637 REVERSE LENGTH=343	LOC_Os01g58390.1	protein|haloacid dehalogenase, putative, expressed	NA	NA	NA	GO:0003824|catalytic activity	GO:0005739|mitochondrion
pt2_05564	A	A1S	Potri.002G060700	Potri.002G060700(AS)	POPTR_0002s06150	sp|Q6WG30|T5H_TAXCU	Taxadiene 5-alpha hydroxylase OS=Taxus cuspidata PE=1 SV=2	AT2G42850.1	| Symbols: CYP718 | cytochrome P450, family 718 | chr2:17831662-17833309 FORWARD LENGTH=485	LOC_Os07g33440.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g091760.1	Taxane 13-alpha-hydroxylase chr5 39004461-39002697 H EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0009507|chloroplast
pt2_05565	A	A1S	Potri.002G060800	Potri.002G060800(AS)	POPTR_0002s06160	NA	NA	AT2G42840.1	| Symbols: PDF1 | protodermal factor 1 | chr2:17826327-17827426 REVERSE LENGTH=306	LOC_Os01g52690.1	protein|retrotransposon protein, putative, unclassified, expressed	NA	NA	GO:0010075|regulation of meristem growth	NA	GO:0005576|extracellular region GO:0005634|nucleus
pt2_05566	A	A1S	Potri.002G060900	Potri.002G060900(AS)	POPTR_0002s06170	sp|Q7Y1V5|C78AB_ORYSJ	Cytochrome P450 78A11 OS=Oryza sativa subsp. japonica GN=CYP78A11 PE=1 SV=2	AT5G09970.1	| Symbols: CYP78A7 | cytochrome P450, family 78, subfamily A, polypeptide 7 | chr5:3112241-3113987 FORWARD LENGTH=536	LOC_Os10g26340.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g045250.1	Cytochrome P450 78A11 chr5 19442194-19440472 E EGN_Mt100125 20111014	GO:0010075|regulation of meristem growth GO:0048445|carpel morphogenesis GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	NA
pt2_05567	A	A1S	Potri.002G061000	Potri.002G061000(AS)	POPTR_0002s06180	sp|Q94BU1|Y1181_ARATH	Uncharacterized aarF domain-containing protein kinase At1g71810, chloroplastic OS=Arabidopsis thaliana GN=At1g71810 PE=1 SV=1	AT1G71810.1	| Symbols: | Protein kinase superfamily protein | chr1:27002602-27007964 REVERSE LENGTH=692	LOC_Os04g54790.1	protein| ELMO/CED-12 family protein, putative, expressed	IMGA|Medtr5g068050.1	"aarF domain-containing protein kinase, putative" chr5 27790878-27796425 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane GO:0009507|chloroplast GO:0010287|plastoglobule
pt2_05568	A	A1S	Potri.002G061100	Potri.002G061100(AS)	POPTR_0002s06190	sp|Q00497|AROK_SOLLC	Shikimate kinase, chloroplastic OS=Solanum lycopersicum PE=2 SV=1	AT2G21940.5	| Symbols: SK1, ATSK1 | shikimate kinase 1 | chr2:9351106-9352881 FORWARD LENGTH=303	LOC_Os02g51410.1	protein|shikimate kinase, putative, expressed	NA	NA	GO:0006744|ubiquinone biosynthetic process GO:0019632|shikimate metabolic process	GO:0004765|shikimate kinase activity GO:0005524|ATP binding	GO:0009507|chloroplast
pt2_05569	A	A1S	Potri.002G061200	Potri.002G061200(AS)	POPTR_0002s06200	sp|Q8HXM1|CSTF2_BOVIN	Cleavage stimulation factor subunit 2 OS=Bos taurus GN=CSTF2 PE=2 SV=1	AT1G71800.1	| Symbols: CSTF64 | cleavage stimulating factor 64 | chr1:26999606-27001850 FORWARD LENGTH=461	NA	NA	IMGA|contig_13476_1.1	RNA-binding protein contig_13476 2412-66 E PREDN 20111014	GO:0031123|RNA 3'-end processing GO:0045892|negative regulation of transcription, DNA-dependent GO:0048589|developmental growth	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding GO:0003729|mRNA binding GO:0005515|protein binding	GO:0005634|nucleus
pt2_05570	A	A1S	Potri.002G061200	Potri.002G061200(AS)	POPTR_0002s06210	sp|Q8HXM1|CSTF2_BOVIN	Cleavage stimulation factor subunit 2 OS=Bos taurus GN=CSTF2 PE=2 SV=1	AT1G71800.1	| Symbols: CSTF64 | cleavage stimulating factor 64 | chr1:26999606-27001850 FORWARD LENGTH=461	NA	NA	IMGA|contig_13476_1.1	RNA-binding protein contig_13476 2412-66 E PREDN 20111014	GO:0031123|RNA 3'-end processing GO:0045892|negative regulation of transcription, DNA-dependent GO:0048589|developmental growth	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding GO:0003729|mRNA binding GO:0005515|protein binding	GO:0005634|nucleus
pt2_05571	A	A1S	Potri.002G061300	Potri.002G061300(AS)	POPTR_0002s06210	sp|Q84K00|NAC78_ARATH	NAC domain-containing protein 78 OS=Arabidopsis thaliana GN=NAC078 PE=2 SV=2	AT1G34190.1	| Symbols: anac017, NAC017 | NAC domain containing protein 17 | chr1:12451729-12453914 FORWARD LENGTH=557	LOC_Os05g35170.5	protein|no apical meristem protein, putative, expressed	IMGA|Medtr5g076850.1	NAC domain protein chr5 31792058-31787352 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006623|protein targeting to vacuole GO:0006944|cellular membrane fusion GO:0007275|multicellular organismal development GO:0016192|vesicle-mediated transport GO:0016197|endosomal transport	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_05572	A	A1S	Potri.002G061400	Potri.002G061400(AS)	POPTR_0002s06230	sp|Q8VYI1|SBH1_ARATH	Sphingoid base hydroxylase 1 OS=Arabidopsis thaliana GN=SBH1 PE=2 SV=1	AT1G69640.1	| Symbols: SBH1 | sphingoid base hydroxylase 1 | chr1:26193933-26195466 REVERSE LENGTH=260	LOC_Os07g43460.1	protein|sphingolipid C4-hydroxylase SUR2, putative, expressed	IMGA|Medtr5g040320.1	"Hydrolase, putative" chr5 17317105-17319950 F EGN_Mt100125 20111014	GO:0006633|fatty acid biosynthetic process GO:0009640|photomorphogenesis GO:0016126|sterol biosynthetic process GO:0046520|sphingoid biosynthetic process GO:0055114|oxidation-reduction process	GO:0000170|sphingosine hydroxylase activity GO:0003824|catalytic activity GO:0005506|iron ion binding GO:0016491|oxidoreductase activity	GO:0005783|endoplasmic reticulum GO:0005794|Golgi apparatus
pt2_05573	A	A1S	Potri.002G061500	Potri.002G061500(AS)	POPTR_0002s06240	sp|P0C8Z0|Y8359_ORYSI	Uncharacterized protein OsI_027940 OS=Oryza sativa subsp. indica GN=OsI_027940 PE=1 SV=2	AT4G02450.2	| Symbols: | HSP20-like chaperones superfamily protein | chr4:1073987-1075765 REVERSE LENGTH=240	LOC_Os03g26460.1	protein|CS domain containing protein, putative, expressed	NA	NA	NA	GO:0003674|molecular_function	GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_05574	A	A1S	Potri.002G061600	Potri.002G061600(AS)	POPTR_0002s06250	sp|Q9BZE2|PUS3_HUMAN	tRNA pseudouridine(38/39) synthase OS=Homo sapiens GN=PUS3 PE=1 SV=3	AT1G34150.1	| Symbols: | Pseudouridine synthase family protein | chr1:12436086-12439237 FORWARD LENGTH=446	LOC_Os03g26440.1	protein|tRNA pseudouridine synthase family protein, putative, expressed	NA	NA	GO:0001522|pseudouridine synthesis GO:0006730|one-carbon metabolic process GO:0009451|RNA modification	GO:0003723|RNA binding GO:0009982|pseudouridine synthase activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05575	A	A1S	Potri.002G061800	Potri.002G061800(AS)	POPTR_0002s06260	NA	NA	AT1G22730.1	| Symbols: | MA3 domain-containing protein | chr1:8046511-8048769 FORWARD LENGTH=693	LOC_Os08g02690.1	protein|MA3 domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_05576	A	A1S	Potri.002G061900	Potri.002G061900(AS)	POPTR_0002s06270	sp|Q9AV97|KDSA_ARATH	2-dehydro-3-deoxyphosphooctonate aldolase OS=Arabidopsis thaliana GN=KDSA PE=2 SV=2	AT1G79500.4	| Symbols: AtkdsA1 | Aldolase-type TIM barrel family protein | chr1:29903604-29905989 FORWARD LENGTH=290	LOC_Os12g10784.1	protein|2-dehydro-3-deoxyphosphooctonate aldolase, putative, expressed	NA	NA	GO:0008152|metabolic process GO:0009058|biosynthetic process GO:0010306|rhamnogalacturonan II biosynthetic process	GO:0003824|catalytic activity GO:0008676|3-deoxy-8-phosphooctulonate synthase activity	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_05577	A	A1S	Potri.002G062100	Potri.002G062100(AS)	POPTR_0002s06280	NA	NA	AT5G36120.1	| Symbols: CCB3, YLMG3, atylmg3 | cofactor assembly, complex C (B6F) | chr5:14198679-14199203 REVERSE LENGTH=174	LOC_Os01g73540.1	protein|YGGT family protein, putative, expressed	NA	NA	GO:0000023|maltose metabolic process GO:0006098|pentose-phosphate shunt GO:0009965|leaf morphogenesis GO:0010027|thylakoid membrane organization GO:0010190|cytochrome b6f complex assembly GO:0019252|starch biosynthetic process GO:0030154|cell differentiation GO:0043085|positive regulation of catalytic activity GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0016020|membrane
pt2_05578	D	D1S	Potri.002G062200	Potri.002G062200(DS)	POPTR_0002s06290	sp|A9PBH9|DRE2_POPTR	Anamorsin homolog OS=Populus trichocarpa GN=POPTRDRAFT_761104 PE=2 SV=1	AT5G18400.1	| Symbols: | Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis | chr5:6092955-6094566 REVERSE LENGTH=269	LOC_Os04g57810.2	protein|GA18008-PA, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0005515|protein binding	GO:0005737|cytoplasm
pt2_05579	A	A1S	Potri.002G062300	Potri.002G062300(AS)	POPTR_0002s06300	NA	NA	AT1G71780.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 34 Blast hits to 34 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:26995406-26996638 REVERSE LENGTH=197	LOC_Os01g51800.1	protein|expressed protein	NA	NA	GO:0008150|biological_process GO:0009744|response to sucrose stimulus GO:0009749|response to glucose stimulus GO:0009750|response to fructose stimulus GO:0009853|photorespiration	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0005783|endoplasmic reticulum
pt2_05580	A	A1S	Potri.002G062400	Potri.002G062400(AS)	POPTR_0002s06310	sp|Q43463|RAB7_SOYBN	Ras-related protein Rab7 OS=Glycine max PE=2 SV=1	AT4G09720.1	| Symbols: ATRABG3A, RABG3A | RAB GTPase homolog G3A | chr4:6133101-6134959 FORWARD LENGTH=206	LOC_Os01g51700.1	protein|ras-related protein, putative, expressed	IMGA|Medtr5g076590.1	GTP binding protein chr5 31676321-31681732 F EGN_Mt100125 20111014	GO:0006184|GTP catabolic process GO:0006886|intracellular protein transport GO:0006913|nucleocytoplasmic transport GO:0007165|signal transduction GO:0007264|small GTPase mediated signal transduction GO:0015031|protein transport GO:0016192|vesicle-mediated transport	GO:0003924|GTPase activity GO:0005525|GTP binding	GO:0005622|intracellular GO:0005737|cytoplasm GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0016020|membrane
pt2_05581	A	A2S	Potri.002G062500	Potri.002G062500(AS) Potri.005G198700(DS)	POPTR_0002s06320	sp|P0C031|RUB2_ORYSJ	Ubiquitin-NEDD8-like protein RUB2 OS=Oryza sativa subsp. japonica GN=RUB2 PE=2 SV=2	AT1G31340.1	| Symbols: RUB1, NEDD8, ATRUB1 | related to ubiquitin 1 | chr1:11218076-11219417 REVERSE LENGTH=156	LOC_Os06g44080.1	protein|ubiquitin family protein, putative, expressed	IMGA|Medtr5g092700.1	Bi-ubiquitin chr5 39454527-39453230 F EGN_Mt100125 20111014	GO:0006464|cellular protein modification process GO:0009693|ethylene biosynthetic process GO:0009733|response to auxin stimulus GO:0009790|embryo development GO:0045116|protein neddylation	NA	GO:0005829|cytosol GO:0005886|plasma membrane
pt2_05582	A	A1S	Potri.002G062600	Potri.002G062600(AS)	POPTR_0002s06330	NA	NA	AT1G22750.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1475 (InterPro:IPR009943); Has 185 Blast hits to 155 proteins in 21 species: Archae - 0; Bacteria - 8; Metazoa - 3; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink). | chr1:8050911-8052631 FORWARD LENGTH=247	LOC_Os06g38320.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005576|extracellular region GO:0005739|mitochondrion GO:0005773|vacuole
pt2_05583	A	A1S	Potri.002G062600	Potri.002G062600(AS)	POPTR_0002s06330	NA	NA	AT1G22750.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1475 (InterPro:IPR009943); Has 185 Blast hits to 155 proteins in 21 species: Archae - 0; Bacteria - 8; Metazoa - 3; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink). | chr1:8050911-8052631 FORWARD LENGTH=247	LOC_Os06g38320.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005576|extracellular region GO:0005739|mitochondrion GO:0005773|vacuole
pt2_05584	B	B2S	Potri.002G062700	Potri.002G062700(BS) Potri.005G198500(DS)	POPTR_0002s06340	sp|O64380|PABP3_ARATH	Polyadenylate-binding protein 3 OS=Arabidopsis thaliana GN=PAB3 PE=2 SV=1	AT1G22760.1	| Symbols: PAB3 | poly(A) binding protein 3 | chr1:8055599-8058799 FORWARD LENGTH=660	LOC_Os08g22354.2	protein|polyadenylate-binding protein, putative, expressed	IMGA|Medtr1g019150.1	Polyadenylate-binding protein chr1 5864665-5869890 F EGN_Mt100125 20111014	GO:0006397|mRNA processing	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding GO:0003743|translation initiation factor activity	NA
pt2_05585	A	A1S	Potri.002G062800	Potri.002G062800(AS)	POPTR_0002s06350	NA	NA	AT1G71760.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 84 Blast hits to 84 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 42; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). | chr1:26989414-26990499 FORWARD LENGTH=276	LOC_Os01g51850.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_05586	C	C1S	Potri.002G063000	Potri.002G063000(CS)	NA	NA	AT1G71740.1	| Symbols: | unknown protein; Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:26987245-26987637 FORWARD LENGTH=130	NA	NA	NA	NA	GO:0008150|biological_process GO:0048765|root hair cell differentiation	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_05587	A	A1S	Potri.002G063100	Potri.002G063100(AS)	POPTR_0002s06370	NA	NA	AT1G71730.1	| Symbols: | unknown protein; Has 52 Blast hits to 52 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). | chr1:26986298-26986831 REVERSE LENGTH=177	LOC_Os05g08920.1	protein|late embryogenesis abundant protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_05588	A	A1S	Potri.002G063300	Potri.002G063300(AS)	POPTR_0002s06380	sp|C0LGF5|Y1341_ARATH	Probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2	AT1G34110.1	| Symbols: | Leucine-rich receptor-like protein kinase family protein | chr1:12417331-12421246 REVERSE LENGTH=1072	LOC_Os06g38990.1	protein|receptor-like protein kinase 2 precursor, putative, expressed	IMGA|Medtr5g045910.1	Receptor-like protein kinase chr5 19714325-19723568 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_05589	A	A1S	Potri.002G063400	Potri.002G063400(AS)	POPTR_0002s06390	sp|P46228|RS1_SYNP6	30S ribosomal protein S1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rpsA PE=1 SV=4	AT1G71720.1	| Symbols: | Nucleic acid-binding proteins superfamily | chr1:26983744-26985893 FORWARD LENGTH=500	LOC_Os01g40640.1	protein|S1 RNA binding domain containing protein, expressed	NA	NA	NA	GO:0003723|RNA binding	GO:0009507|chloroplast
pt2_05590	C	C1S	Potri.002G063500	Potri.002G063500(CS)	sp|Q84MA2|IP5P1_ARATH	Type I inositol 1,4,5-trisphosphate 5-phosphatase 1 OS=Arabidopsis thaliana GN=IP5P1 PE=1 SV=2	AT1G71710.2	| Symbols: | DNAse I-like superfamily protein | chr1:26973796-26976747 REVERSE LENGTH=655	LOC_Os01g51890.1	protein|endonuclease/exonuclease/phosphatase family domain containing protein, expressed	IMGA|Medtr1g097690.1	"Type I inositol-1,4,5-trisphosphate 5-phosphatase" chr1 27931481-27933669 E EGN_Mt100125 20111014	GO:0008150|biological_process GO:0032957|inositol trisphosphate metabolic process GO:0046854|phosphatidylinositol phosphorylation GO:0046855|inositol phosphate dephosphorylation	GO:0004445|inositol-polyphosphate 5-phosphatase activity	GO:0005737|cytoplasm
pt2_05591	A	A1S	Potri.002G063600	Potri.002G063600(AS)	POPTR_0002s06410	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008152|metabolic process	GO:0000166|nucleotide binding GO:0016491|oxidoreductase activity	GO:0005575|cellular_component
pt2_05592	A	A1S	Potri.002G063700	Potri.002G063700(AS)	POPTR_0002s06420	sp|Q9Y259|CHKB_HUMAN	Choline/ethanolamine kinase OS=Homo sapiens GN=CHKB PE=1 SV=3	AT4G09760.1	| Symbols: | Protein kinase superfamily protein | chr4:6148955-6151150 REVERSE LENGTH=346	LOC_Os01g51920.1	protein|phosphotransferase, putative, expressed	IMGA|Medtr1g098090.1	Choline/ethanolamine kinase chr1 28077996-28074520 F EGN_Mt100125 20111014	GO:0009611|response to wounding GO:0009620|response to fungus GO:0009695|jasmonic acid biosynthetic process GO:0009753|response to jasmonic acid stimulus GO:0010200|response to chitin	GO:0004103|choline kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0016773|phosphotransferase activity, alcohol group as acceptor	GO:0005737|cytoplasm
pt2_05593	A	A1S	Potri.002G063700	Potri.002G063700(AS)	POPTR_0002s06420	sp|Q9Y259|CHKB_HUMAN	Choline/ethanolamine kinase OS=Homo sapiens GN=CHKB PE=1 SV=3	AT4G09760.1	| Symbols: | Protein kinase superfamily protein | chr4:6148955-6151150 REVERSE LENGTH=346	LOC_Os01g51920.1	protein|phosphotransferase, putative, expressed	IMGA|Medtr1g098090.1	Choline/ethanolamine kinase chr1 28077996-28074520 F EGN_Mt100125 20111014	GO:0009611|response to wounding GO:0009620|response to fungus GO:0009695|jasmonic acid biosynthetic process GO:0009753|response to jasmonic acid stimulus GO:0010200|response to chitin	GO:0004103|choline kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0016773|phosphotransferase activity, alcohol group as acceptor	GO:0005737|cytoplasm
pt2_05594	B	B1S	Potri.002G063700	Potri.002G063700(BS)	POPTR_0002s06420	sp|Q9Y259|CHKB_HUMAN	Choline/ethanolamine kinase OS=Homo sapiens GN=CHKB PE=1 SV=3	AT4G09760.1	| Symbols: | Protein kinase superfamily protein | chr4:6148955-6151150 REVERSE LENGTH=346	LOC_Os01g51920.1	protein|phosphotransferase, putative, expressed	IMGA|Medtr1g098090.1	Choline/ethanolamine kinase chr1 28077996-28074520 F EGN_Mt100125 20111014	GO:0009611|response to wounding GO:0009620|response to fungus GO:0009695|jasmonic acid biosynthetic process GO:0009753|response to jasmonic acid stimulus GO:0010200|response to chitin	GO:0004103|choline kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0016773|phosphotransferase activity, alcohol group as acceptor	GO:0005737|cytoplasm
pt2_05595	A	A1S	Potri.002G063700	Potri.002G063700(AS)	POPTR_0002s06420	sp|Q9Y259|CHKB_HUMAN	Choline/ethanolamine kinase OS=Homo sapiens GN=CHKB PE=1 SV=3	AT4G09760.1	| Symbols: | Protein kinase superfamily protein | chr4:6148955-6151150 REVERSE LENGTH=346	LOC_Os01g51920.1	protein|phosphotransferase, putative, expressed	IMGA|Medtr1g098090.1	Choline/ethanolamine kinase chr1 28077996-28074520 F EGN_Mt100125 20111014	GO:0009611|response to wounding GO:0009620|response to fungus GO:0009695|jasmonic acid biosynthetic process GO:0009753|response to jasmonic acid stimulus GO:0010200|response to chitin	GO:0004103|choline kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0016773|phosphotransferase activity, alcohol group as acceptor	GO:0005737|cytoplasm
pt2_05596	B	B1S	Potri.002G063800	Potri.002G063800(BS)	POPTR_0002s06430	sp|Q93Z38|TAR4_ARATH	Tryptophan aminotransferase-related protein 4 OS=Arabidopsis thaliana GN=TAR4 PE=2 SV=2	AT1G34060.1	| Symbols: | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein | chr1:12396561-12398299 REVERSE LENGTH=463	LOC_Os01g52010.1	protein|alliin lyase precursor, putative, expressed	IMGA|Medtr5g033510.1	Alliin lyase chr5 14008018-14006345 H EGN_Mt100125 20111014	NA	GO:0003824|catalytic activity GO:0016846|carbon-sulfur lyase activity GO:0030170|pyridoxal phosphate binding	GO:0005576|extracellular region
pt2_05597	C	C1S	Potri.002G063900	Potri.002G063900(CS)	NA	NA	AT1G34065.1	| Symbols: SAMC2 | S-adenosylmethionine carrier 2 | chr1:12398717-12401036 REVERSE LENGTH=345	LOC_Os05g29860.1	protein|mitochondrial carrier protein, putative, expressed	IMGA|Medtr1g098130.1	S-adenosylmethionine mitochondrial carrier protein chr1 28091926-28097683 H EGN_Mt100125 20111014	GO:0006364|rRNA processing GO:0006810|transport GO:0006839|mitochondrial transport GO:0009658|chloroplast organization GO:0009902|chloroplast relocation GO:0010027|thylakoid membrane organization GO:0010207|photosystem II assembly GO:0015805|S-adenosylmethionine transport GO:0035304|regulation of protein dephosphorylation GO:0042793|transcription from plastid promoter GO:0045893|positive regulation of transcription, DNA-dependent	GO:0000095|S-adenosylmethionine transmembrane transporter activity	GO:0005739|mitochondrion GO:0005743|mitochondrial inner membrane GO:0009507|chloroplast GO:0009536|plastid GO:0009941|chloroplast envelope
pt2_05598	A	A1S	Potri.002G064000	Potri.002G064000(AS)	POPTR_0002s06450	sp|Q93Z38|TAR4_ARATH	Tryptophan aminotransferase-related protein 4 OS=Arabidopsis thaliana GN=TAR4 PE=2 SV=2	AT1G34060.1	| Symbols: | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein | chr1:12396561-12398299 REVERSE LENGTH=463	LOC_Os01g52010.1	protein|alliin lyase precursor, putative, expressed	IMGA|Medtr5g033510.1	Alliin lyase chr5 14008018-14006345 H EGN_Mt100125 20111014	NA	GO:0003824|catalytic activity GO:0016846|carbon-sulfur lyase activity GO:0030170|pyridoxal phosphate binding	GO:0005576|extracellular region
pt2_05599	C	C1S	Potri.002G064100	Potri.002G064100(CS)	sp|P83852|CBPD_LOPSP	Carboxypeptidase D (Fragment) OS=Lophonetta specularioides GN=CPD PE=1 SV=1	AT1G71696.1	| Symbols: SOL1 | carboxypeptidase D, putative | chr1:26967637-26970364 FORWARD LENGTH=422	LOC_Os06g05240.1	protein|zinc carboxypeptidase family protein, putative, expressed	IMGA|contig_86570_1.1	Carboxypeptidase D contig_86570 1464-3857 E PREDN 20111014	GO:0006508|proteolysis GO:0010082|regulation of root meristem growth	GO:0004180|carboxypeptidase activity GO:0004181|metallocarboxypeptidase activity GO:0008270|zinc ion binding	GO:0005576|extracellular region
pt2_05600	A	A1S	Potri.002G064200	Potri.002G064200(AS)	POPTR_0002s06470	NA	NA	AT1G29500.1	| Symbols: | SAUR-like auxin-responsive protein family | chr1:10321290-10321697 FORWARD LENGTH=135	LOC_Os09g37480.1	protein|OsSAUR53 - Auxin-responsive SAUR gene family member, expressed	NA	NA	GO:0009733|response to auxin stimulus	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_05601	A	A1S	Potri.002G064300	Potri.002G064300(AS)	POPTR_0002s06480	NA	NA	AT1G29510.1	| Symbols: SAUR68 | SAUR-like auxin-responsive protein family | chr1:10322683-10323114 FORWARD LENGTH=143	LOC_Os09g37400.1	protein|OsSAUR45 - Auxin-responsive SAUR gene family member, expressed	NA	NA	GO:0009733|response to auxin stimulus	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_05602	A	A1S	Potri.002G064400	Potri.002G064400(AS)	POPTR_0002s06490	sp|Q9SQI2|GIGAN_ARATH	Protein GIGANTEA OS=Arabidopsis thaliana GN=GI PE=1 SV=2	AT1G22770.1	| Symbols: GI, FB | gigantea protein (GI) | chr1:8062398-8067447 FORWARD LENGTH=1173	LOC_Os01g08700.6	protein|GIGANTEA, putative, expressed	IMGA|Medtr1g098160.3	Protein GIGANTEA chr1 28108924-28116846 F EGN_Mt100125 20111014	GO:0005982|starch metabolic process GO:0006355|regulation of transcription, DNA-dependent GO:0007623|circadian rhythm GO:0009409|response to cold GO:0009637|response to blue light GO:0009639|response to red or far red light GO:0009908|flower development GO:0010218|response to far red light GO:0010378|temperature compensation of the circadian clock GO:0042542|response to hydrogen peroxide GO:0042752|regulation of circadian rhythm GO:0048574|long-day photoperiodism, flowering GO:0048578|positive regulation of long-day photoperiodism, flowering GO:0080167|response to karrikin	GO:0005515|protein binding	GO:0005634|nucleus GO:0005654|nucleoplasm
pt2_05603	A	A1S	Potri.002G064400	Potri.002G064400(AS)	POPTR_0002s06490	sp|Q9SQI2|GIGAN_ARATH	Protein GIGANTEA OS=Arabidopsis thaliana GN=GI PE=1 SV=2	AT1G22770.1	| Symbols: GI, FB | gigantea protein (GI) | chr1:8062398-8067447 FORWARD LENGTH=1173	LOC_Os01g08700.6	protein|GIGANTEA, putative, expressed	IMGA|Medtr1g098160.3	Protein GIGANTEA chr1 28108924-28116846 F EGN_Mt100125 20111014	GO:0005982|starch metabolic process GO:0006355|regulation of transcription, DNA-dependent GO:0007623|circadian rhythm GO:0009409|response to cold GO:0009637|response to blue light GO:0009639|response to red or far red light GO:0009908|flower development GO:0010218|response to far red light GO:0010378|temperature compensation of the circadian clock GO:0042542|response to hydrogen peroxide GO:0042752|regulation of circadian rhythm GO:0048574|long-day photoperiodism, flowering GO:0048578|positive regulation of long-day photoperiodism, flowering GO:0080167|response to karrikin	GO:0005515|protein binding	GO:0005634|nucleus GO:0005654|nucleoplasm
pt2_05604	C	C1S	Potri.002G064600	Potri.002G064600(CS)	sp|P34788|RS18_ARATH	40S ribosomal protein S18 OS=Arabidopsis thaliana GN=RPS18A PE=1 SV=1	AT4G09800.1	| Symbols: RPS18C | S18 ribosomal protein | chr4:6173818-6174963 FORWARD LENGTH=152	LOC_Os07g07709.1	protein|ribosomal protein S13p/S18e, putative, expressed	IMGA|Medtr1g098220.1	40S ribosomal protein S18 chr1 28145728-28147698 F EGN_Mt100125 20111014	GO:0006412|translation GO:0006413|translational initiation	GO:0003676|nucleic acid binding GO:0003723|RNA binding GO:0003735|structural constituent of ribosome	GO:0005618|cell wall GO:0005622|intracellular GO:0005737|cytoplasm GO:0005774|vacuolar membrane GO:0005829|cytosol GO:0005840|ribosome GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0015935|small ribosomal subunit GO:0022627|cytosolic small ribosomal subunit
pt2_05605	C	C1S	Potri.002G064600	Potri.002G064600(CS)	sp|P34788|RS18_ARATH	40S ribosomal protein S18 OS=Arabidopsis thaliana GN=RPS18A PE=1 SV=1	AT4G09800.1	| Symbols: RPS18C | S18 ribosomal protein | chr4:6173818-6174963 FORWARD LENGTH=152	LOC_Os07g07709.1	protein|ribosomal protein S13p/S18e, putative, expressed	IMGA|Medtr1g098220.1	40S ribosomal protein S18 chr1 28145728-28147698 F EGN_Mt100125 20111014	GO:0006412|translation GO:0006413|translational initiation	GO:0003676|nucleic acid binding GO:0003723|RNA binding GO:0003735|structural constituent of ribosome	GO:0005618|cell wall GO:0005622|intracellular GO:0005737|cytoplasm GO:0005774|vacuolar membrane GO:0005829|cytosol GO:0005840|ribosome GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0015935|small ribosomal subunit GO:0022627|cytosolic small ribosomal subunit
pt2_05606	A	A1S	Potri.002G064700	Potri.002G064700(AS)	POPTR_0002s06520	sp|Q9SRE4|UGAL2_ARATH	UDP-galactose transporter 2 OS=Arabidopsis thaliana GN=UDP-GALT2 PE=2 SV=1	AT4G09810.1	| Symbols: | Nucleotide-sugar transporter family protein | chr4:6175415-6176892 REVERSE LENGTH=335	LOC_Os05g12490.1	protein|transporter-related, putative, expressed	IMGA|Medtr5g096310.1	Solute carrier family 35 member E3 chr5 41077330-41074635 E EGN_Mt100125 20111014	GO:0006863|purine nucleobase transport	NA	GO:0005886|plasma membrane GO:0016020|membrane
pt2_05607	A	A1S	Potri.002G064800	Potri.002G064800(AS)	POPTR_0002s06540	NA	NA	AT4G09830.1	| Symbols: | Uncharacterised conserved protein UCP009193 | chr4:6188866-6190591 FORWARD LENGTH=191	LOC_Os01g40690.1	protein|holocarboxylase synthetase, putative, expressed	IMGA|Medtr1g106890.1	hypothetical protein chr1 31497001-31491671 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_05608	A	A1S	Potri.002G064900	Potri.002G064900(AS)	POPTR_0002s06550	NA	NA	AT1G22790.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34010.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr1:8070271-8071292 FORWARD LENGTH=216	LOC_Os01g40700.1	protein|expressed protein	IMGA|Medtr1g098260.1	hypothetical protein chr1 28164533-28170529 F EGN_Mt100125 20111014	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0008150|biological_process GO:0009086|methionine biosynthetic process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_05609	A	A2S	Potri.002G064900	Potri.002G064900(AS) Potri.005G196300(BS)	POPTR_0002s06550	NA	NA	AT1G22790.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34010.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr1:8070271-8071292 FORWARD LENGTH=216	LOC_Os01g40700.1	protein|expressed protein	IMGA|Medtr1g098260.1	hypothetical protein chr1 28164533-28170529 F EGN_Mt100125 20111014	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0008150|biological_process GO:0009086|methionine biosynthetic process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_05610	A	A2S	Potri.002G065000	Potri.002G065000(AS) Potri.005G196100(DS)	POPTR_0002s06560	NA	NA	AT1G34000.1	| Symbols: OHP2 | one-helix protein 2 | chr1:12358151-12358902 REVERSE LENGTH=172	LOC_Os01g40710.1	protein|high light inducible protein, putative, expressed	IMGA|Medtr1g098280.1	One-helix protein chr1 28175097-28177325 F EGN_Mt100125 20111014	GO:0009637|response to blue light GO:0009642|response to light intensity GO:0009644|response to high light intensity GO:0009744|response to sucrose stimulus GO:0010114|response to red light GO:0010155|regulation of proton transport GO:0010218|response to far red light	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane
pt2_05611	A	A1S	Potri.002G065100	Potri.002G065100(AS)	POPTR_0002s06570	sp|Q9ZVM9|Y1461_ARATH	Probable serine/threonine-protein kinase At1g54610 OS=Arabidopsis thaliana GN=At1g54610 PE=1 SV=1	AT1G54610.2	| Symbols: | Protein kinase superfamily protein | chr1:20393962-20396902 REVERSE LENGTH=573	LOC_Os07g47180.2	protein|transposon protein, putative, unclassified, expressed	IMGA|Medtr5g008860.1	hypothetical protein chr5 1727811-1731359 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006499|N-terminal protein myristoylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_05612	A	A2S	Potri.002G065200	Potri.002G065200(AS) Potri.005G195800(DS)	POPTR_0002s06580	NA	NA	AT4G09890.1	| Symbols: | Protein of unknown function (DUF3511) | chr4:6218501-6218764 FORWARD LENGTH=87	LOC_Os06g47220.1	protein|expressed protein	IMGA|Medtr1g098310.1	hypothetical protein chr1 28192037-28191320 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05613	A	A1S	Potri.002G065300	Potri.002G065300(AS)	POPTR_0002s06590	sp|Q96520|PER12_ARATH	Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=1 SV=1	AT1G71695.1	| Symbols: | Peroxidase superfamily protein | chr1:26964359-26966557 FORWARD LENGTH=358	LOC_Os01g73220.1	protein|peroxidase precursor, putative, expressed	IMGA|Medtr5g021060.2	Peroxidase chr5 7821272-7822903 F EGN_Mt100125 20111014	GO:0006979|response to oxidative stress GO:0010075|regulation of meristem growth GO:0048653|anther development GO:0055114|oxidation-reduction process	GO:0004601|peroxidase activity GO:0020037|heme binding	GO:0005576|extracellular region GO:0005618|cell wall GO:0005773|vacuole GO:0009505|plant-type cell wall GO:0009506|plasmodesma GO:0016020|membrane
pt2_05614	A	A1S	Potri.002G065400	Potri.002G065400(AS)	POPTR_0002s06600	sp|Q9LYN8|EXS_ARATH	Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1	AT5G42440.1	| Symbols: | Protein kinase superfamily protein | chr5:16973434-16974513 REVERSE LENGTH=359	LOC_Os11g06780.1	protein|serine/threonine-protein kinase BRI1-like 1 precursor, putative, expressed	IMGA|Medtr1g098360.1	Serine/threonine protein kinase-like protein chr1 28219380-28218049 F EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	NA
pt2_05615	A	A2S	Potri.002G065500	Potri.002G065500(AS) Potri.005G195300(DS)	POPTR_0002s06610	sp|Q9SB58|ZDH19_ARATH	Probable S-acyltransferase At4g24630 OS=Arabidopsis thaliana GN=At4g24630 PE=1 SV=2	AT4G24630.1	| Symbols: | DHHC-type zinc finger family protein | chr4:12714919-12717111 FORWARD LENGTH=407	LOC_Os05g36090.1	protein|zinc finger DHHC domain-containing protein, putative, expressed	IMGA|Medtr1g098390.1	Palmitoyltransferase SWF1 chr1 28233746-28237541 E EGN_Mt100125 20111014	GO:0007275|multicellular organismal development GO:0048573|photoperiodism, flowering	GO:0004872|receptor activity GO:0008270|zinc ion binding	GO:0005886|plasma membrane GO:0016020|membrane
pt2_05616	A	A1S	Potri.002G065600	Potri.002G065600(AS)	POPTR_0002s06620	sp|Q70II3|EF110_ARATH	Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana GN=ERF110 PE=2 SV=2	AT5G50080.1	| Symbols: ERF110 | ethylene response factor 110 | chr5:20365948-20366835 FORWARD LENGTH=220	LOC_Os01g64790.1	protein|AP2 domain containing protein, expressed	IMGA|contig_17822_1.1	Ethylene responsive transcription factor 2a contig_17822 658-1774 E PREDN 20111014	GO:0002679|respiratory burst involved in defense response GO:0006355|regulation of transcription, DNA-dependent GO:0009723|response to ethylene stimulus GO:0010200|response to chitin GO:0035556|intracellular signal transduction	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus GO:0005730|nucleolus
pt2_05617	A	A1S	Potri.002G065700	Potri.002G065700(AS)	POPTR_0002s06630	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006094|gluconeogenesis GO:0006260|DNA replication GO:0006261|DNA-dependent DNA replication GO:0007010|cytoskeleton organization GO:0009165|nucleotide biosynthetic process GO:0009202|deoxyribonucleoside triphosphate biosynthetic process GO:0010498|proteasomal protein catabolic process GO:0046686|response to cadmium ion GO:0055114|oxidation-reduction process	GO:0004748|ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor GO:0005524|ATP binding	GO:0005737|cytoplasm GO:0005971|ribonucleoside-diphosphate reductase complex
pt2_05618	A	A1S	Potri.002G065800	Potri.002G065800(AS)	POPTR_0002s06640	NA	NA	AT1G43130.1	| Symbols: LCV2 | like COV 2 | chr1:16228661-16231158 REVERSE LENGTH=261	LOC_Os01g64780.2	protein|COV1, putative, expressed	NA	NA	GO:0010222|stem vascular tissue pattern formation	GO:0003674|molecular_function	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_05619	A	A1S	Potri.002G065900	Potri.002G065900(AS)	POPTR_0002s06650	NA	NA	AT1G76730.1	| Symbols: | NagB/RpiA/CoA transferase-like superfamily protein | chr1:28803033-28804703 REVERSE LENGTH=354	LOC_Os12g07020.1	protein|5-formyltetrahydrofolate cyclo-ligase, putative, expressed	NA	NA	GO:0000023|maltose metabolic process GO:0008152|metabolic process GO:0009396|folic acid-containing compound biosynthetic process GO:0016117|carotenoid biosynthetic process GO:0019252|starch biosynthetic process	GO:0003824|catalytic activity	GO:0009507|chloroplast
pt2_05620	A	A1S	Potri.002G066000	Potri.002G066000(AS)	POPTR_0002s06660	sp|Q6ICX4|PTBP3_ARATH	Polypyrimidine tract-binding protein homolog 3 OS=Arabidopsis thaliana GN=At1g43190 PE=2 SV=1	AT1G43190.2	| Symbols: PTB3 | polypyrimidine tract-binding protein 3 | chr1:16275432-16278185 REVERSE LENGTH=432	LOC_Os05g36120.1	protein|polypyrimidine tract-binding protein, putative, expressed	IMGA|Medtr1g098530.2	Polypyrimidine tract-binding protein-like protein chr1 28303683-28298221 F EGN_Mt100125 20111014	GO:0006397|mRNA processing GO:0006417|regulation of translation GO:0043484|regulation of RNA splicing	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0000932|cytoplasmic mRNA processing body GO:0005634|nucleus GO:0005737|cytoplasm
pt2_05621	A	A2S	Potri.002G066100	Potri.002G066100(AS) Potri.005G194600(DS)	POPTR_0002s06670	NA	NA	AT1G20220.1	| Symbols: | Alba DNA/RNA-binding protein | chr1:7005090-7007285 REVERSE LENGTH=315	LOC_Os09g37006.2	protein|protein of unknown function domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003676|nucleic acid binding	GO:0005576|extracellular region GO:0005829|cytosol
pt2_05622	A	A1S	Potri.002G066200	Potri.002G066200(AS)	POPTR_0002s06680	sp|P35684|RL3_ORYSJ	60S ribosomal protein L3 OS=Oryza sativa subsp. japonica GN=RPL3 PE=2 SV=2	AT1G43170.8	| Symbols: RP1 | ribosomal protein 1 | chr1:16266992-16268631 FORWARD LENGTH=389	LOC_Os12g07010.1	protein|ribosomal protein L3, putative, expressed	NA	NA	GO:0001510|RNA methylation GO:0006412|translation GO:0009793|embryo development ending in seed dormancy	GO:0003735|structural constituent of ribosome	GO:0005618|cell wall GO:0005622|intracellular GO:0005730|nucleolus GO:0005737|cytoplasm GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005829|cytosol GO:0005840|ribosome GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane GO:0022625|cytosolic large ribosomal subunit GO:0022626|cytosolic ribosome
pt2_05623	A	A1S	Potri.002G066300	Potri.002G066300(AS)	POPTR_0002s06690	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05624	G	G1	NA	NA	POPTR_0002s06700	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05625	A	A1S	Potri.002G066600	Potri.002G066600(AS)	POPTR_0002s06710	sp|Q94JQ6|CESA6_ARATH	Cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Arabidopsis thaliana GN=CESA6 PE=1 SV=2	AT5G64740.1	| Symbols: CESA6, IXR2, E112, PRC1 | cellulose synthase 6 | chr5:25881555-25886333 FORWARD LENGTH=1084	LOC_Os07g14850.1	protein|CESA6 - cellulose synthase, expressed	IMGA|Medtr5g029190.1	Cellulose synthase-like protein chr5 11949044-11944517 E EGN_Mt100125 20111014	GO:0010214|seed coat development GO:0030244|cellulose biosynthetic process	GO:0008270|zinc ion binding GO:0016757|transferase activity, transferring glycosyl groups GO:0016759|cellulose synthase activity GO:0016760|cellulose synthase (UDP-forming) activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_05626	A	A1S	Potri.002G066700	Potri.002G066700(AS)	POPTR_0002s06720	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05627	A	A1S	Potri.002G066800	Potri.002G066800(AS)	POPTR_0002s06730	sp|Q6NPF9|TRXY1_ARATH	Thioredoxin Y1, chloroplastic OS=Arabidopsis thaliana GN=At1g76760 PE=2 SV=1	AT1G76760.1	| Symbols: ATY1, TRX-Y1, TY1 | thioredoxin Y1 | chr1:28811873-28812948 REVERSE LENGTH=172	LOC_Os01g73234.1	protein|thioredoxin, putative, expressed	IMGA|Medtr1g114290.1	Thioredoxin-X chr1 33117040-33114885 F EGN_Mt100125 20111014	GO:0006662|glycerol ether metabolic process GO:0043085|positive regulation of catalytic activity GO:0045454|cell redox homeostasis	GO:0008047|enzyme activator activity GO:0009055|electron carrier activity GO:0015035|protein disulfide oxidoreductase activity GO:0016671|oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_05628	A	A1S	Potri.002G066900	Potri.002G066900(AS)	POPTR_0002s06750	NA	NA	AT1G43580.1	| Symbols: | Sphingomyelin synthetase family protein | chr1:16410673-16412612 REVERSE LENGTH=421	LOC_Os04g34620.1	protein|expressed protein	IMGA|Medtr1g098650.1	hypothetical protein chr1 28365005-28368561 E EGN_Mt100125 20111014	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0008150|biological_process GO:0009086|methionine biosynthetic process	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0009506|plasmodesma
pt2_05629	A	A1S	Potri.002G067000	Potri.002G067000(AS)	POPTR_0002s06760	sp|Q39962|CBPR_HEVBR	Citrate-binding protein OS=Hevea brasiliensis GN=CBP PE=1 SV=1	NA	NA	LOC_Os12g06900.1	protein|citrate-binding protein precursor, putative, expressed	NA	NA	NA	NA	NA
pt2_05630	A	A1S	Potri.002G067100	Potri.002G067100(AS)	POPTR_0002s06770	sp|Q54IL5|UGT52_DICDI	UDP-sugar-dependent glycosyltransferase 52 OS=Dictyostelium discoideum GN=ugt52 PE=2 SV=1	AT1G43620.3	| Symbols: UGT80B1 | UDP-Glycosyltransferase superfamily protein | chr1:16425654-16429500 REVERSE LENGTH=615	LOC_Os01g64750.1	protein|sterol 3-beta-glucosyltransferase, putative, expressed	IMGA|Medtr1g098640.3	Sterol 3-beta-glucosyltransferase chr1 28356059-28363721 E EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0008152|metabolic process GO:0009813|flavonoid biosynthetic process GO:0009845|seed germination GO:0010214|seed coat development GO:0016125|sterol metabolic process GO:0030259|lipid glycosylation	GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups GO:0016906|sterol 3-beta-glucosyltransferase activity	GO:0005634|nucleus GO:0005773|vacuole GO:0005774|vacuolar membrane
pt2_05631	A	A1S	Potri.002G067200	Potri.002G067200(AS)	POPTR_0002s06785	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003676|nucleic acid binding GO:0008270|zinc ion binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05632	A	A1S	Potri.002G067300	Potri.002G067300(AS)	POPTR_0002s06790	sp|Q6DYE5|U496K_ARATH	UPF0496 protein At1g20180 OS=Arabidopsis thaliana GN=At1g20180 PE=2 SV=2	AT1G20180.1	| Symbols: | Protein of unknown function (DUF677) | chr1:6996354-6997779 FORWARD LENGTH=390	LOC_Os04g34590.1	protein|UPF0496 protein 2, putative, expressed	IMGA|Medtr1g025960.1	hypothetical protein chr1 8466145-8467780 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_05633	A	A1S	Potri.002G067400	Potri.002G067400(AS)	POPTR_0002s06800	sp|P42777|GBF4_ARATH	G-box-binding factor 4 OS=Arabidopsis thaliana GN=GBF4 PE=1 SV=1	AT5G44080.1	| Symbols: | Basic-leucine zipper (bZIP) transcription factor family protein | chr5:17738787-17739734 REVERSE LENGTH=315	LOC_Os01g64730.1	protein|bZIP transcription factor domain containing protein, expressed	IMGA|Medtr1g098590.1	ABSCISIC ACID-INSENSITIVE 5-like protein chr1 28342607-28337803 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009410|response to xenobiotic stimulus GO:0030968|endoplasmic reticulum unfolded protein response	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_05634	C	C1S	Potri.002G067400	Potri.002G067400(CS)	sp|P42777|GBF4_ARATH	G-box-binding factor 4 OS=Arabidopsis thaliana GN=GBF4 PE=1 SV=1	AT5G44080.1	| Symbols: | Basic-leucine zipper (bZIP) transcription factor family protein | chr5:17738787-17739734 REVERSE LENGTH=315	LOC_Os01g64730.1	protein|bZIP transcription factor domain containing protein, expressed	IMGA|Medtr1g098590.1	ABSCISIC ACID-INSENSITIVE 5-like protein chr1 28342607-28337803 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009410|response to xenobiotic stimulus GO:0030968|endoplasmic reticulum unfolded protein response	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_05635	A	A1S	Potri.002G067500	Potri.002G067500(AS)	POPTR_0002s06810	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05636	A	A1S	Potri.002G067600	Potri.002G067600(AS)	POPTR_0002s06820	NA	NA	AT1G21090.1	| Symbols: | Cupredoxin superfamily protein | chr1:7384854-7386199 FORWARD LENGTH=242	NA	NA	NA	NA	NA	NA	GO:0005886|plasma membrane GO:0031225|anchored to membrane
pt2_05637	A	A1S	Potri.002G067700	Potri.002G067700(AS)	POPTR_0002s06830	NA	NA	AT1G76770.1	| Symbols: | HSP20-like chaperones superfamily protein | chr1:28813569-28814378 FORWARD LENGTH=244	NA	NA	IMGA|Medtr1g098690.1	17.6 kDa class I heat shock protein chr1 28392198-28393178 H EGN_Mt100125 20111014	GO:0008150|biological_process GO:0009408|response to heat GO:0009644|response to high light intensity GO:0042542|response to hydrogen peroxide	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_05638	A	A2S	Potri.002G067800	Potri.002G067800(AS) Potri.005G192600(BS)	POPTR_0002s06840	NA	NA	AT1G18740.1	| Symbols: | Protein of unknown function (DUF793) | chr1:6464125-6465273 FORWARD LENGTH=382	LOC_Os12g06780.1	protein|expressed protein	IMGA|contig_77945_1.1	Exocyst subunit Exo70-interacting protein Roh1 contig_77945 334-1767 F PREDN 20111014	GO:0006612|protein targeting to membrane GO:0008150|biological_process GO:0009611|response to wounding GO:0009612|response to mechanical stimulus GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010200|response to chitin GO:0010363|regulation of plant-type hypersensitive response	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_05639	A	A1S	Potri.002G067900	Potri.002G067900(AS)	POPTR_0002s06850	NA	NA	NA	NA	LOC_Os01g64720.1	protein|expressed protein	NA	NA	NA	NA	NA
pt2_05640	A	A1S	Potri.002G068000	Potri.002G068000(AS)	POPTR_0002s06860	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05641	A	A1S	Potri.002G068100	Potri.002G068100(AS)	POPTR_0002s06870	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05642	A	A3S	Potri.002G068200	Potri.002G068200(AS) Potri.005G192300(BS) Potri.005G192400(DS)	POPTR_0002s06880	sp|Q75HX5|TLP8_ORYSJ	Tubby-like F-box protein 8 OS=Oryza sativa subsp. japonica GN=TULP8 PE=2 SV=1	AT1G76900.2	| Symbols: AtTLP1, TLP1 | tubby like protein 1 | chr1:28882741-28884377 FORWARD LENGTH=455	LOC_Os05g36190.1	protein|OsFBT7 - F-box and tubby domain containing protein, expressed	IMGA|Medtr5g020580.1	Tubby-like F-box protein chr5 7624254-7620655 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009620|response to fungus	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008081|phosphoric diester hydrolase activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05643	A	A1S	Potri.002G068300	Potri.002G068300(AS)	POPTR_0002s06890	sp|Q6J163|5NG4_PINTA	Auxin-induced protein 5NG4 OS=Pinus taeda PE=2 SV=1	AT1G43650.1	| Symbols: | nodulin MtN21 /EamA-like transporter family protein | chr1:16443861-16446814 REVERSE LENGTH=343	LOC_Os05g01570.1	protein|auxin-induced protein 5NG4, putative, expressed	IMGA|Medtr5g068790.1	Auxin-induced protein 5NG4 chr5 28157060-28160706 H EGN_Mt100125 20111014	NA	NA	GO:0009507|chloroplast GO:0016020|membrane
pt2_05644	B	B1S	Potri.002G068400	Potri.002G068400(BS)	POPTR_0002s06900	sp|Q39117|TGT2_ARATH	Trihelix transcription factor GT-2 OS=Arabidopsis thaliana GN=GT-2 PE=2 SV=1	AT1G76890.2	| Symbols: GT2, AT-GT2 | Duplicated homeodomain-like superfamily protein | chr1:28873211-28875203 REVERSE LENGTH=575	LOC_Os02g43300.1	protein|expressed protein	IMGA|Medtr1g081180.1	Trihelix transcription factor chr1 20670509-20668424 E EGN_Mt100125 20111014	NA	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_05645	A	A1S	Potri.002G068500	Potri.002G068500(AS)	POPTR_0002s06910	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05646	A	A1S	Potri.002G068600	Potri.002G068600(AS)	POPTR_0002s06920	sp|Q39117|TGT2_ARATH	Trihelix transcription factor GT-2 OS=Arabidopsis thaliana GN=GT-2 PE=2 SV=1	AT1G76880.1	| Symbols: | Duplicated homeodomain-like superfamily protein | chr1:28865594-28867931 FORWARD LENGTH=603	LOC_Os03g02240.1	protein|AT-GTL1, putative, expressed	IMGA|Medtr1g081180.1	Trihelix transcription factor chr1 20670509-20668424 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_05647	A	A1S	Potri.002G068700	Potri.002G068700(AS)	POPTR_0002s06930	NA	NA	AT1G21200.1	| Symbols: | sequence-specific DNA binding transcription factors | chr1:7421483-7422814 FORWARD LENGTH=443	LOC_Os11g06410.3	protein|homeodomain, putative, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_05648	A	A2S	Potri.002G068800	Potri.002G068800(AS) Potri.005G191600(DS)	POPTR_0002s06940	sp|P62311|LSM3_MOUSE	U6 snRNA-associated Sm-like protein LSm3 OS=Mus musculus GN=Lsm3 PE=2 SV=2	AT1G76860.1	| Symbols: | Small nuclear ribonucleoprotein family protein | chr1:28854594-28855637 REVERSE LENGTH=98	LOC_Os01g64690.1	protein|LSM domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005732|small nucleolar ribonucleoprotein complex
pt2_05649	A	A2S	Potri.002G068900	Potri.002G068900(AS) Potri.005G191500(BS)	POPTR_0002s06950	sp|Q8S3U9|EXOC2_ARATH	Exocyst complex component 2 OS=Arabidopsis thaliana GN=SEC5A PE=1 SV=1	AT1G21170.1	| Symbols: SEC5B | Exocyst complex component SEC5 | chr1:7413050-7419411 FORWARD LENGTH=1090	LOC_Os04g34450.1	protein|expressed protein	NA	NA	GO:0009846|pollen germination GO:0009860|pollen tube growth	GO:0003674|molecular_function	GO:0005794|Golgi apparatus GO:0005829|cytosol
pt2_05650	A	A2S	Potri.002G069000	Potri.002G069000(AS) Potri.005G191400(DS)	POPTR_0002s06960	sp|P46276|F16P2_SOLTU	Fructose-1,6-bisphosphatase, cytosolic OS=Solanum tuberosum PE=2 SV=1	AT1G43670.1	| Symbols: | Inositol monophosphatase family protein | chr1:16468184-16470347 FORWARD LENGTH=341	LOC_Os01g64660.2	protein|fructose-1,6-bisphosphatase, putative, expressed	NA	NA	GO:0005975|carbohydrate metabolic process GO:0005983|starch catabolic process GO:0005986|sucrose biosynthetic process GO:0006000|fructose metabolic process GO:0009737|response to abscisic acid stimulus GO:0009750|response to fructose stimulus GO:0015979|photosynthesis GO:0030388|fructose 1,6-bisphosphate metabolic process	GO:0042132|fructose 1,6-bisphosphate 1-phosphatase activity GO:0042578|phosphoric ester hydrolase activity	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol
pt2_05651	A	A1S	Potri.002G069100	Potri.002G069100(AS)	POPTR_0002s06970	sp|Q0IIH8|F188A_BOVIN	Protein FAM188A OS=Bos taurus GN=FAM188A PE=2 SV=1	AT1G43690.1	| Symbols: | ubiquitin interaction motif-containing protein | chr1:16478519-16482589 FORWARD LENGTH=599	LOC_Os04g34440.1	protein|ubiquitin interaction motif-containing protein, putative, expressed	IMGA|Medtr1g098940.1	Protein FAM188A chr1 28527308-28534689 E EGN_Mt100125 20111014	GO:0008150|biological_process GO:0010228|vegetative to reproductive phase transition of meristem GO:0016926|protein desumoylation GO:0050665|hydrogen peroxide biosynthetic process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005829|cytosol
pt2_05652	A	A2S	Potri.002G069200	Potri.002G069200(AS) Potri.005G191000(DS)	POPTR_0002s06980	sp|P48504|QCR6_SOLTU	Cytochrome b-c1 complex subunit 6 OS=Solanum tuberosum PE=1 SV=2	AT1G15120.1	| Symbols: | Ubiquinol-cytochrome C reductase hinge protein | chr1:5203091-5203897 FORWARD LENGTH=69	LOC_Os11g06340.1	protein|ubiquinol-cytochrome C reductase hinge protein, putative, expressed	NA	NA	GO:0006096|glycolysis GO:0006122|mitochondrial electron transport, ubiquinol to cytochrome c GO:0006511|ubiquitin-dependent protein catabolic process GO:0009060|aerobic respiration GO:0009853|photorespiration GO:0046686|response to cadmium ion GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	GO:0008121|ubiquinol-cytochrome-c reductase activity	GO:0005739|mitochondrion GO:0005750|mitochondrial respiratory chain complex III
pt2_05653	A	A1S	Potri.002G069200	Potri.002G069200(AS)	POPTR_0002s06980	sp|P48504|QCR6_SOLTU	Cytochrome b-c1 complex subunit 6 OS=Solanum tuberosum PE=1 SV=2	AT1G15120.1	| Symbols: | Ubiquinol-cytochrome C reductase hinge protein | chr1:5203091-5203897 FORWARD LENGTH=69	LOC_Os11g06340.1	protein|ubiquinol-cytochrome C reductase hinge protein, putative, expressed	NA	NA	GO:0006096|glycolysis GO:0006122|mitochondrial electron transport, ubiquinol to cytochrome c GO:0006511|ubiquitin-dependent protein catabolic process GO:0009060|aerobic respiration GO:0009853|photorespiration GO:0046686|response to cadmium ion GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	GO:0008121|ubiquinol-cytochrome-c reductase activity	GO:0005739|mitochondrion GO:0005750|mitochondrial respiratory chain complex III
pt2_05654	A	A1S	Potri.002G069300	Potri.002G069300(AS)	POPTR_0002s06990	sp|P48504|QCR6_SOLTU	Cytochrome b-c1 complex subunit 6 OS=Solanum tuberosum PE=1 SV=2	AT1G15120.1	| Symbols: | Ubiquinol-cytochrome C reductase hinge protein | chr1:5203091-5203897 FORWARD LENGTH=69	LOC_Os11g06340.1	protein|ubiquinol-cytochrome C reductase hinge protein, putative, expressed	NA	NA	GO:0006096|glycolysis GO:0006122|mitochondrial electron transport, ubiquinol to cytochrome c GO:0006511|ubiquitin-dependent protein catabolic process GO:0009060|aerobic respiration GO:0009853|photorespiration GO:0046686|response to cadmium ion GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	GO:0008121|ubiquinol-cytochrome-c reductase activity	GO:0005739|mitochondrion GO:0005750|mitochondrial respiratory chain complex III
pt2_05655	A	A1S	Potri.002G069400	Potri.002G069400(AS)	POPTR_0002s07000	sp|Q9M2C3|VITH3_ARATH	Vacuolar iron transporter homolog 3 OS=Arabidopsis thaliana GN=At3g43630 PE=3 SV=1	AT3G43630.1	| Symbols: | Vacuolar iron transporter (VIT) family protein | chr3:15538816-15539418 FORWARD LENGTH=200	LOC_Os04g59020.1	protein|integral membrane protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_05656	A	A1S	Potri.002G069500	Potri.002G069500(AS)	POPTR_0002s07020	sp|Q9MA75|VIP1_ARATH	Transcription factor VIP1 OS=Arabidopsis thaliana GN=VIP1 PE=1 SV=1	AT1G43700.1	| Symbols: VIP1, SUE3 | VIRE2-interacting protein 1 | chr1:16484352-16486017 FORWARD LENGTH=341	LOC_Os12g06520.1	protein|bZIP transcription factor domain containing protein, expressed	IMGA|Medtr5g075390.1	Transcription factor RF2b chr5 31048502-31045199 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0008272|sulfate transport GO:0009410|response to xenobiotic stimulus GO:0009970|cellular response to sulfate starvation GO:0030968|endoplasmic reticulum unfolded protein response GO:0045596|negative regulation of cell differentiation GO:0045892|negative regulation of transcription, DNA-dependent GO:0051170|nuclear import GO:0080134|regulation of response to stress	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0043565|sequence-specific DNA binding GO:0046983|protein dimerization activity GO:0051019|mitogen-activated protein kinase binding	GO:0005634|nucleus
pt2_05657	A	A1S	Potri.002G069600	Potri.002G069600(AS)	POPTR_0002s07030	sp|Q9FH76|ABAH3_ARATH	Abscisic acid 8'-hydroxylase 3 OS=Arabidopsis thaliana GN=CYP707A3 PE=1 SV=1	AT1G19630.1	| Symbols: CYP722A1 | cytochrome P450, family 722, subfamily A, polypeptide 1 | chr1:6785427-6787967 REVERSE LENGTH=476	LOC_Os03g61980.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g025610.1	Abscisic acid 8'-hydroxylase chr5 10165401-10168264 F EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005576|extracellular region
pt2_05658	A	A1S	Potri.002G069700	Potri.002G069700(AS)	POPTR_0002s07040	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05659	A	A1S	Potri.002G069800	Potri.002G069800(AS)	POPTR_0002s07050	sp|P54772|DCHS_SOLLC	Histidine decarboxylase OS=Solanum lycopersicum GN=HDC PE=2 SV=1	AT1G43710.1	| Symbols: emb1075 | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein | chr1:16486534-16488298 REVERSE LENGTH=482	LOC_Os02g33710.1	protein|decarboxylase, putative, expressed	IMGA|Medtr1g099050.1	Serine decarboxylase chr1 28611563-28608431 H EGN_Mt100125 20111014	GO:0006520|cellular amino acid metabolic process GO:0006580|ethanolamine metabolic process GO:0009793|embryo development ending in seed dormancy	GO:0003824|catalytic activity GO:0016831|carboxy-lyase activity GO:0030170|pyridoxal phosphate binding	GO:0005829|cytosol GO:0005886|plasma membrane
pt2_05660	A	A1S	Potri.002G069900	Potri.002G069900(AS)	POPTR_0002s07060	sp|O49279|SKI15_ARATH	SKP1-interacting partner 15 OS=Arabidopsis thaliana GN=SKIP15 PE=1 SV=1	AT1G76920.1	| Symbols: | F-box family protein | chr1:28892295-28893419 FORWARD LENGTH=374	NA	NA	NA	NA	GO:0006511|ubiquitin-dependent protein catabolic process GO:0006869|lipid transport GO:0048767|root hair elongation	GO:0004842|ubiquitin-protein ligase activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_05661	A	A1S	Potri.002G070000	Potri.002G070000(AS)	POPTR_0002s07070	sp|Q2MHE4|HT1_ARATH	Serine/threonine-protein kinase HT1 OS=Arabidopsis thaliana GN=HT1 PE=1 SV=1	AT4G38470.1	| Symbols: | ACT-like protein tyrosine kinase family protein | chr4:17999432-18003551 FORWARD LENGTH=575	LOC_Os12g06670.1	protein|protein kinase family protein, putative, expressed	IMGA|Medtr1g113960.1	Protein kinase like protein chr1 32951049-32942295 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0007015|actin filament organization GO:0008152|metabolic process GO:0009658|chloroplast organization	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004712|protein serine/threonine/tyrosine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016597|amino acid binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005829|cytosol GO:0005886|plasma membrane
pt2_05662	G	G1	NA	NA	POPTR_0002s07080	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05663	R	R	NA	NA	POPTR_0002s07080	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05664	R	R	NA	NA	POPTR_0002s07080	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05665	A	A1S	Potri.002G070200	Potri.002G070200(AS)	POPTR_0002s07090	NA	NA	AT1G76940.1	| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr1:28902707-28904085 REVERSE LENGTH=233	LOC_Os08g43360.3	protein|RNA recognition motif containing protein, putative, expressed	IMGA|Medtr1g099190.1	RNA-binding protein with multiple splicing chr1 28692861-28688078 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05666	A	A1S	Potri.002G070200	Potri.002G070200(AS)	POPTR_0002s07090	NA	NA	AT1G76940.1	| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr1:28902707-28904085 REVERSE LENGTH=233	LOC_Os08g43360.3	protein|RNA recognition motif containing protein, putative, expressed	IMGA|Medtr1g099190.1	RNA-binding protein with multiple splicing chr1 28692861-28688078 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05667	A	A1S	Potri.002G070200	Potri.002G070200(AS)	POPTR_0002s07090	NA	NA	AT1G76940.1	| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr1:28902707-28904085 REVERSE LENGTH=233	LOC_Os08g43360.3	protein|RNA recognition motif containing protein, putative, expressed	IMGA|Medtr1g099190.1	RNA-binding protein with multiple splicing chr1 28692861-28688078 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05668	B	B1S	Potri.014G162500	Potri.014G162500(BS)	POPTR_0002s07100	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05669	A	A1S	Potri.002G070300	Potri.002G070300(AS)	POPTR_0002s07110	sp|Q15751|HERC1_HUMAN	Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1 PE=1 SV=2	AT5G42140.1	| Symbols: | Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain | chr5:16837547-16841640 REVERSE LENGTH=1073	LOC_Os04g58960.1	protein|regulator of chromosome condensation, putative, expressed	IMGA|Medtr1g099220.1	Lateral signaling target protein-like protein chr1 28718110-28707405 E EGN_Mt100125 20111014	GO:0007165|signal transduction	GO:0003682|chromatin binding GO:0008270|zinc ion binding GO:0008536|Ran GTPase binding GO:0035091|phosphatidylinositol binding GO:0046872|metal ion binding	GO:0005576|extracellular region
pt2_05670	C	C1S	Potri.002G070400	Potri.002G070400(CS)	NA	NA	NA	NA	NA	NA	NA	NA	GO:0010227|floral organ abscission	NA	GO:0005576|extracellular region
pt2_05671	A	A1S	Potri.002G070500	Potri.002G070500(AS)	POPTR_0002s07130	sp|Q9LSA6|PUB29_ARATH	U-box domain-containing protein 29 OS=Arabidopsis thaliana GN=PUB29 PE=1 SV=1	AT3G18710.1	| Symbols: PUB29, ATPUB29 | plant U-box 29 | chr3:6434234-6435481 REVERSE LENGTH=415	LOC_Os02g33680.1	protein|U-box domain containing protein, expressed	IMGA|Medtr5g015210.1	U-box domain-containing protein chr5 4982044-4977159 E EGN_Mt100125 20111014	GO:0010200|response to chitin GO:0016567|protein ubiquitination	GO:0004842|ubiquitin-protein ligase activity GO:0070696|transmembrane receptor protein serine/threonine kinase binding	GO:0000151|ubiquitin ligase complex GO:0005737|cytoplasm GO:0009506|plasmodesma
pt2_05672	A	A1S	Potri.002G070600	Potri.002G070600(AS)	POPTR_0002s07140	NA	NA	AT1G21326.1	| Symbols: | VQ motif-containing protein | chr1:7469002-7469721 REVERSE LENGTH=239	LOC_Os08g01260.1	protein|VQ domain containing protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05673	A	A1S	Potri.002G070700	Potri.002G070700(AS)	POPTR_0002s07150	sp|P68349|DOF12_ARATH	Dof zinc finger protein DOF1.2 OS=Arabidopsis thaliana GN=DOF1.2 PE=2 SV=1	AT1G21340.1	| Symbols: | Dof-type zinc finger DNA-binding family protein | chr1:7476087-7476869 FORWARD LENGTH=260	LOC_Os05g36900.1	protein|dof zinc finger domain containing protein, putative, expressed	IMGA|Medtr5g031440.1	Dof zinc finger protein chr5 13054757-13055767 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05674	A	A1S	Potri.002G070700	Potri.002G070700(AS)	POPTR_0002s07150	sp|P68349|DOF12_ARATH	Dof zinc finger protein DOF1.2 OS=Arabidopsis thaliana GN=DOF1.2 PE=2 SV=1	AT1G21340.1	| Symbols: | Dof-type zinc finger DNA-binding family protein | chr1:7476087-7476869 FORWARD LENGTH=260	LOC_Os05g36900.1	protein|dof zinc finger domain containing protein, putative, expressed	IMGA|Medtr5g031440.1	Dof zinc finger protein chr5 13054757-13055767 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05675	R	R	NA	NA	POPTR_0002s07150	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05676	A	A1S	Potri.002G070800	Potri.002G070800(AS)	POPTR_0002s07160	NA	NA	AT5G41470.1	| Symbols: | Nuclear transport factor 2 (NTF2) family protein | chr5:16593953-16595419 FORWARD LENGTH=277	LOC_Os03g64380.1	protein|expressed protein	IMGA|Medtr5g010050.1	hypothetical protein chr5 2376223-2374874 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_05677	A	A1S	Potri.002G070900	Potri.002G070900(AS)	POPTR_0002s07170	sp|Q9LHP4|RCH2_ARATH	Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1	AT3G24240.1	| Symbols: | Leucine-rich repeat receptor-like protein kinase family protein | chr3:8780551-8784150 FORWARD LENGTH=1141	LOC_Os04g04330.2	protein|receptor-like protein kinase 2 precursor, putative, expressed	IMGA|Medtr5g045910.1	Receptor-like protein kinase chr5 19714325-19723568 E EGN_Mt100125 20111014	GO:0002237|response to molecule of bacterial origin GO:0006468|protein phosphorylation GO:0007165|signal transduction GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway GO:0010103|stomatal complex morphogenesis GO:0048443|stamen development	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_05678	A	A1S	Potri.002G071000	Potri.002G071000(AS)	POPTR_0002s07180	NA	NA	AT1G21350.3	| Symbols: | Thioredoxin superfamily protein | chr1:7477376-7479012 REVERSE LENGTH=252	LOC_Os07g15670.3	protein|peroxiredoxin, putative, expressed	NA	NA	GO:0010027|thylakoid membrane organization GO:0055114|oxidation-reduction process	GO:0016209|antioxidant activity GO:0016491|oxidoreductase activity	GO:0005576|extracellular region GO:0005634|nucleus GO:0009507|chloroplast
pt2_05679	A	A1S	Potri.002G071100	Potri.002G071100(AS)	POPTR_0002s07190	sp|Q80W71|PKHA8_MOUSE	Pleckstrin homology domain-containing family A member 8 OS=Mus musculus GN=Plekha8 PE=2 SV=2	AT1G21360.1	| Symbols: GLTP2 | glycolipid transfer protein 2 | chr1:7481365-7483237 FORWARD LENGTH=223	LOC_Os04g35790.3	protein|GLTP domain containing protein, putative, expressed	NA	NA	GO:0006661|phosphatidylinositol biosynthetic process GO:0046836|glycolipid transport	GO:0017089|glycolipid transporter activity GO:0051861|glycolipid binding	GO:0005737|cytoplasm
pt2_05680	B	B1S	Potri.002G071200	Potri.002G071200(BS)	POPTR_0002s07200	sp|P0C1U4|GUN9_ORYSJ	Endoglucanase 9 OS=Oryza sativa subsp. japonica GN=GLU1 PE=2 SV=1	AT5G49720.1	| Symbols: ATGH9A1, TSD1, DEC, KOR, RSW2, IRX2, KOR1, GH9A1 | glycosyl hydrolase 9A1 | chr5:20197765-20200168 REVERSE LENGTH=621	LOC_Os03g21210.1	protein|endoglucanase, putative, expressed	IMGA|Medtr5g085730.1	Endoglucanase chr5 36028973-36032829 E EGN_Mt100125 20111014	GO:0000271|polysaccharide biosynthetic process GO:0000902|cell morphogenesis GO:0005975|carbohydrate metabolic process GO:0006096|glycolysis GO:0006833|water transport GO:0006972|hyperosmotic response GO:0007030|Golgi organization GO:0009266|response to temperature stimulus GO:0009651|response to salt stress GO:0009734|auxin mediated signaling pathway GO:0009735|response to cytokinin stimulus GO:0009750|response to fructose stimulus GO:0009825|multidimensional cell growth GO:0009826|unidimensional cell growth GO:0009932|cell tip growth GO:0010193|response to ozone GO:0010817|regulation of hormone levels GO:0016049|cell growth GO:0016051|carbohydrate biosynthetic process GO:0019344|cysteine biosynthetic process GO:0030243|cellulose metabolic process GO:0030244|cellulose biosynthetic process GO:0032880|regulation of protein localization GO:0042538|hyperosmotic salinity response GO:0042744|hydrogen peroxide catabolic process GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0043622|cortical microtubule organization GO:0046686|response to cadmium ion GO:0048193|Golgi vesicle transport GO:0048367|shoot development GO:0048765|root hair cell differentiation GO:0048767|root hair elongation GO:0071555|cell wall organization	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0008810|cellulase activity	GO:0005768|endosome GO:0005769|early endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0005886|plasma membrane GO:0009504|cell plate
pt2_05681	A	A1S	Potri.002G071300	Potri.002G071300(AS)	POPTR_0002s07210	sp|P87055|YDJ7_SCHPO	Uncharacterized protein C57A10.07 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC57A10.07 PE=2 SV=1	AT1G21370.2	| Symbols: | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF218 (InterPro:IPR003848); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr1:7484250-7485451 FORWARD LENGTH=342	LOC_Os04g35780.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_05682	A	A1S	Potri.002G071400	Potri.002G071400(AS)	POPTR_0002s07220	sp|Q6GQE1|T184C_XENLA	Transmembrane protein 184C OS=Xenopus laevis GN=tmem184c PE=2 SV=1	AT1G77220.1	| Symbols: | Protein of unknown function (DUF300) | chr1:29013232-29015530 FORWARD LENGTH=484	LOC_Os05g44080.1	protein|transmembrane protein, putative, expressed	NA	NA	GO:0008150|biological_process	NA	NA
pt2_05683	A	A1S	Potri.002G071500	Potri.002G071500(AS)	POPTR_0002s07230	NA	NA	AT1G77160.1	| Symbols: | Protein of unknown function (DUF506) | chr1:28995388-28996523 REVERSE LENGTH=263	LOC_Os01g65740.1	protein|plant-specific domain TIGR01615 family protein, expressed	IMGA|Medtr1g070970.1	hypothetical protein chr1 17367673-17366452 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_05684	A	A1S	Potri.002G071600	Potri.002G071600(AS)	POPTR_0002s07240	sp|O49048|VPS45_ARATH	Vacuolar protein sorting-associated protein 45 homolog OS=Arabidopsis thaliana GN=VPS45 PE=1 SV=2	AT1G77140.1	| Symbols: VPS45, ATVPS45 | vacuolar protein sorting 45 | chr1:28984163-28987681 FORWARD LENGTH=569	LOC_Os02g24134.1	protein|Sec1 family transport protein, putative, expressed	IMGA|contig_67043_1.1	Vacuolar protein-sorting protein contig_67043 946-146 H PREDN 20111014	GO:0006612|protein targeting to membrane GO:0006623|protein targeting to vacuole GO:0006816|calcium ion transport GO:0006820|anion transport GO:0006862|nucleotide transport GO:0006882|cellular zinc ion homeostasis GO:0006886|intracellular protein transport GO:0006888|ER to Golgi vesicle-mediated transport GO:0006904|vesicle docking involved in exocytosis GO:0006944|cellular membrane fusion GO:0009306|protein secretion GO:0009624|response to nematode GO:0010363|regulation of plant-type hypersensitive response GO:0015696|ammonium transport GO:0015802|basic amino acid transport GO:0016192|vesicle-mediated transport GO:0043069|negative regulation of programmed cell death GO:0043090|amino acid import GO:0043269|regulation of ion transport	GO:0005515|protein binding GO:0008565|protein transporter activity	GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0009705|plant-type vacuole membrane
pt2_05685	A	A1S	Potri.002G071700	Potri.002G071700(AS)	POPTR_0002s07250	NA	NA	AT1G77122.1	| Symbols: | Uncharacterised protein family UPF0090 | chr1:28977427-28978674 REVERSE LENGTH=323	LOC_Os04g35760.1	protein|expressed protein	IMGA|Medtr5g045020.1	Ribosome maturation factor rimP chr5 19331774-19328927 F EGN_Mt100125 20111014	GO:0008150|biological_process GO:0009560|embryo sac egg cell differentiation	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_05686	A	A1S	Potri.002G071800	Potri.002G071800(AS)	POPTR_0002s07260	sp|Q9FH05|SCP42_ARATH	Serine carboxypeptidase-like 42 OS=Arabidopsis thaliana GN=SCPL42 PE=2 SV=1	AT5G42240.1	| Symbols: scpl42 | serine carboxypeptidase-like 42 | chr5:16888717-16890931 FORWARD LENGTH=473	LOC_Os11g10750.1	protein|OsSCP48 - Putative Serine Carboxypeptidase homologue, expressed	IMGA|Medtr5g072570.1	Serine carboxypeptidase-like protein chr5 29906817-29903151 H EGN_Mt100125 20111014	GO:0006508|proteolysis	GO:0004185|serine-type carboxypeptidase activity	GO:0005576|extracellular region GO:0005618|cell wall
pt2_05687	A	A1S	Potri.002G071900	Potri.002G071900(AS)	POPTR_0002s07270	NA	NA	AT1G48880.1	| Symbols: TBL7 | TRICHOME BIREFRINGENCE-LIKE 7 | chr1:18081033-18082650 FORWARD LENGTH=445	LOC_Os01g65800.1	protein|powdery mildew resistant protein 5, putative, expressed	IMGA|Medtr5g033800.1	hypothetical protein chr5 14162416-14157608 E EGN_Mt100125 20111014	GO:0008150|biological_process	NA	NA
pt2_05688	A	A1S	Potri.002G072000	Potri.002G072000(AS)	POPTR_0002s07280	NA	NA	NA	NA	NA	NA	NA	NA	NA	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05689	A	A1S	Potri.002G072100	Potri.002G072100(AS)	POPTR_0002s07290	sp|P25141|ADH1_PETHY	Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1 PE=3 SV=1	AT1G77120.1	| Symbols: ADH1, ADH, ATADH, ATADH1 | alcohol dehydrogenase 1 | chr1:28975509-28977216 FORWARD LENGTH=379	LOC_Os11g10480.1	protein|dehydrogenase, putative, expressed	IMGA|Medtr5g087710.1	Alcohol dehydrogenase-like protein chr5 37019082-37015790 E EGN_Mt100125 20111014	GO:0001666|response to hypoxia GO:0006970|response to osmotic stress GO:0009651|response to salt stress GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0010310|regulation of hydrogen peroxide metabolic process GO:0045333|cellular respiration GO:0046686|response to cadmium ion GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0004022|alcohol dehydrogenase (NAD) activity GO:0008270|zinc ion binding GO:0016491|oxidoreductase activity	GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane
pt2_05690	A	A1S	Potri.002G072200	Potri.002G072200(AS)	POPTR_0002s07300	sp|Q9SQH6|PIN6_ARATH	Probable auxin efflux carrier component 6 OS=Arabidopsis thaliana GN=PIN6 PE=2 SV=2	AT1G77110.1	| Symbols: PIN6 | Auxin efflux carrier family protein | chr1:28970855-28974408 FORWARD LENGTH=570	LOC_Os06g12610.1	protein|auxin efflux carrier component, putative, expressed	NA	NA	GO:0009855|determination of bilateral symmetry GO:0009926|auxin polar transport GO:0010014|meristem initiation GO:0010073|meristem maintenance GO:0048451|petal formation GO:0048453|sepal formation GO:0055085|transmembrane transport	GO:0005215|transporter activity GO:0009672|auxin:hydrogen symporter activity	GO:0005886|plasma membrane GO:0016021|integral to membrane
pt2_05691	A	A1S	Potri.002G072200	Potri.002G072200(AS)	POPTR_0002s07310	sp|Q9SQH6|PIN6_ARATH	Probable auxin efflux carrier component 6 OS=Arabidopsis thaliana GN=PIN6 PE=2 SV=2	AT1G77110.1	| Symbols: PIN6 | Auxin efflux carrier family protein | chr1:28970855-28974408 FORWARD LENGTH=570	LOC_Os06g12610.1	protein|auxin efflux carrier component, putative, expressed	NA	NA	GO:0009855|determination of bilateral symmetry GO:0009926|auxin polar transport GO:0010014|meristem initiation GO:0010073|meristem maintenance GO:0048451|petal formation GO:0048453|sepal formation GO:0055085|transmembrane transport	GO:0005215|transporter activity GO:0009672|auxin:hydrogen symporter activity	GO:0005886|plasma membrane GO:0016021|integral to membrane
pt2_05692	A	A1S	Potri.002G072300	Potri.002G072300(AS)	POPTR_0002s07320	sp|Q3E7Q9|GLYT6_ARATH	Probable glycosyltransferase At5g25310 OS=Arabidopsis thaliana GN=At5g25310 PE=3 SV=2	AT1G21480.1	| Symbols: | Exostosin family protein | chr1:7519116-7521426 REVERSE LENGTH=462	LOC_Os07g09050.1	protein|exostosin family protein, putative, expressed	IMGA|contig_52161_1.1	Exostosin-like glycosyltransferase contig_52161 465-3836 H PREDN 20111014	GO:0008150|biological_process	GO:0003824|catalytic activity	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0016020|membrane
pt2_05693	A	A1S	Potri.002G072400	Potri.002G072400(AS)	POPTR_0002s07330	sp|O49292|PPD4_ARATH	PsbP domain-containing protein 4, chloroplastic OS=Arabidopsis thaliana GN=PPD4 PE=1 SV=2	AT1G77090.1	| Symbols: | Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein | chr1:28960576-28961875 REVERSE LENGTH=260	LOC_Os12g08830.1	protein|thylakoid lumenal 29.8 kDa protein, putative, expressed	NA	NA	GO:0000023|maltose metabolic process GO:0006098|pentose-phosphate shunt GO:0015979|photosynthesis GO:0019252|starch biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019760|glucosinolate metabolic process GO:0043085|positive regulation of catalytic activity	GO:0005509|calcium ion binding	GO:0009507|chloroplast GO:0009523|photosystem II GO:0009534|chloroplast thylakoid GO:0009543|chloroplast thylakoid lumen GO:0009570|chloroplast stroma GO:0009579|thylakoid GO:0009654|oxygen evolving complex GO:0019898|extrinsic to membrane GO:0031977|thylakoid lumen
pt2_05694	A	A1S	Potri.002G072500	Potri.002G072500(AS)	POPTR_0002s07340	sp|Q9LVF9|PP245_ARATH	Pentatricopeptide repeat-containing protein At3g21470 OS=Arabidopsis thaliana GN=PCMP-E29 PE=2 SV=1	AT3G21470.1	| Symbols: | Pentatricopeptide repeat (PPR-like) superfamily protein | chr3:7563503-7565074 FORWARD LENGTH=523	LOC_Os01g65840.1	protein|pentatricopeptide, putative, expressed	IMGA|Medtr5g023040.1	Pentatricopeptide repeat-containing protein chr5 8885948-8890185 H EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_05695	A	A2S	Potri.002G072600	Potri.002G072600(AS) Potri.002G072700(AS)	POPTR_0002s07350	sp|Q8L9J7|SWET1_ARATH	Bidirectional sugar transporter SWEET1 OS=Arabidopsis thaliana GN=SWEET1 PE=1 SV=1	AT1G21460.1	| Symbols: SWEET1, AtSWEET1 | Nodulin MtN3 family protein | chr1:7512030-7513281 REVERSE LENGTH=247	LOC_Os01g65880.1	protein|nodulin MtN3 family protein, putative, expressed	IMGA|Medtr5g092600.1	Protein RUPTURED POLLEN GRAIN chr5 39407104-39405137 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0051119|sugar transmembrane transporter activity	GO:0005886|plasma membrane GO:0005887|integral to plasma membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_05696	B	B2S	Potri.002G072600	Potri.002G072600(BS) Potri.002G072700(BS)	POPTR_0002s07370	sp|Q8L9J7|SWET1_ARATH	Bidirectional sugar transporter SWEET1 OS=Arabidopsis thaliana GN=SWEET1 PE=1 SV=1	AT1G21460.1	| Symbols: SWEET1, AtSWEET1 | Nodulin MtN3 family protein | chr1:7512030-7513281 REVERSE LENGTH=247	LOC_Os01g65880.1	protein|nodulin MtN3 family protein, putative, expressed	IMGA|Medtr5g092600.1	Protein RUPTURED POLLEN GRAIN chr5 39407104-39405137 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0051119|sugar transmembrane transporter activity	GO:0005886|plasma membrane GO:0005887|integral to plasma membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_05697	A	A1S	Potri.002G072900	Potri.002G072900(AS)	POPTR_0002s07380	sp|Q8W234|SEUSS_ARATH	Transcriptional corepressor SEUSS OS=Arabidopsis thaliana GN=SEU PE=1 SV=1	AT1G43850.2	| Symbols: SEU | SEUSS transcriptional co-regulator | chr1:16617872-16621596 FORWARD LENGTH=877	LOC_Os11g10070.1	protein|transcriptional corepressor SEUSS, putative, expressed	NA	NA	GO:0007275|multicellular organismal development GO:0009790|embryo development GO:0009909|regulation of flower development GO:0042744|hydrogen peroxide catabolic process GO:0048467|gynoecium development GO:0048481|ovule development	GO:0003677|DNA binding GO:0003712|transcription cofactor activity GO:0005515|protein binding GO:0046982|protein heterodimerization activity GO:0060090|binding, bridging	GO:0005634|nucleus
pt2_05698	A	A1S	Potri.002G073000	Potri.002G073000(AS)	POPTR_0002s07390	sp|P48384|TRXM_PEA	Thioredoxin M-type, chloroplastic OS=Pisum sativum PE=2 SV=1	AT4G03520.1	| Symbols: ATHM2 | Thioredoxin superfamily protein | chr4:1562585-1564055 REVERSE LENGTH=186	LOC_Os12g08730.1	protein|thioredoxin, putative, expressed	IMGA|contig_166756_1.1	Thioredoxin contig_166756 470-157 F PREDN 20111014	GO:0000023|maltose metabolic process GO:0006098|pentose-phosphate shunt GO:0006109|regulation of carbohydrate metabolic process GO:0006569|tryptophan catabolic process GO:0006662|glycerol ether metabolic process GO:0006979|response to oxidative stress GO:0009684|indoleacetic acid biosynthetic process GO:0009853|photorespiration GO:0010027|thylakoid membrane organization GO:0019252|starch biosynthetic process GO:0043085|positive regulation of catalytic activity GO:0043086|negative regulation of catalytic activity GO:0045454|cell redox homeostasis	GO:0004857|enzyme inhibitor activity GO:0008047|enzyme activator activity GO:0009055|electron carrier activity GO:0015035|protein disulfide oxidoreductase activity	GO:0005618|cell wall GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009570|chloroplast stroma GO:0009579|thylakoid GO:0009941|chloroplast envelope
pt2_05699	A	A1S	Potri.002G073100	Potri.002G073100(AS)	POPTR_0002s07400	sp|O22040|ANP1_ARATH	Mitogen-activated protein kinase kinase kinase ANP1 OS=Arabidopsis thaliana GN=ANP1 PE=1 SV=2	AT1G53570.1	| Symbols: MAP3KA, MAPKKK3 | mitogen-activated protein kinase kinase kinase 3 | chr1:19987391-19990733 FORWARD LENGTH=609	LOC_Os11g10100.3	protein|STE_MEKK_ste11_MAP3K.3 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	IMGA|Medtr5g017890.1	Mitogen-activated protein kinase kinase kinase A chr5 6370522-6365746 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006487|protein N-linked glycosylation	GO:0004672|protein kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05700	A	A1S	Potri.002G073200	Potri.002G073200(AS)	POPTR_0002s07410	sp|Q3SWZ6|SBDS_BOVIN	Ribosome maturation protein SBDS OS=Bos taurus GN=SBDS PE=2 SV=1	AT1G43860.1	| Symbols: | sequence-specific DNA binding transcription factors | chr1:16622244-16624385 REVERSE LENGTH=370	LOC_Os08g01620.1	protein|shwachman-Bodian-Diamond syndrome protein, putative, expressed	IMGA|contig_238007_1.1	Ribosome maturation protein SBDS contig_238007 312-3570 E PREDN 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006364|rRNA processing	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0003723|RNA binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_05701	A	A1S	Potri.002G073300	Potri.002G073300(AS)	POPTR_0002s07420	sp|Q8L7M4|SDN5_ARATH	Small RNA degrading nuclease 5 OS=Arabidopsis thaliana GN=SDN5 PE=2 SV=2	AT5G25800.1	| Symbols: | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr5:8979761-8982724 REVERSE LENGTH=567	LOC_Os12g08740.1	protein|exonuclease, putative, expressed	NA	NA	NA	GO:0003676|nucleic acid binding GO:0004527|exonuclease activity	GO:0005622|intracellular GO:0005634|nucleus
pt2_05702	A	A1S	Potri.002G073400	Potri.002G073400(AS)	POPTR_0002s07430	sp|Q9SDQ3|SCL1_ARATH	Scarecrow-like protein 1 OS=Arabidopsis thaliana GN=SCL1 PE=2 SV=1	AT1G21450.1	| Symbols: SCL1 | SCARECROW-like 1 | chr1:7509721-7511502 FORWARD LENGTH=593	LOC_Os01g65900.1	protein|chitin-inducible gibberellin-responsive protein, putative, expressed	IMGA|Medtr5g097480.1	Chitin-inducible gibberellin-responsive protein chr5 41660791-41664149 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005737|cytoplasm
pt2_05703	A	A1S	Potri.002G073500	Potri.002G073500(AS)	POPTR_0002s07440	sp|Q9FDW1|MYB44_ARATH	Transcription factor MYB44 OS=Arabidopsis thaliana GN=MYB44 PE=2 SV=1	AT1G17950.1	| Symbols: ATMYB52, BW52, MYB52 | myb domain protein 52 | chr1:6177764-6179063 FORWARD LENGTH=249	LOC_Os01g16810.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr5g041570.1	Myb-like protein AA chr5 17831100-17828547 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009737|response to abscisic acid stimulus GO:2000652|regulation of secondary cell wall biogenesis	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_05704	A	A1S	Potri.002G073600	Potri.002G073600(AS)	POPTR_0002s07450	sp|O49290|CPPM_ARATH	Carboxyvinyl-carboxyphosphonate phosphorylmutase, chloroplastic OS=Arabidopsis thaliana GN=At1g77060 PE=1 SV=2	AT1G77060.1	| Symbols: | Phosphoenolpyruvate carboxylase family protein | chr1:28951804-28953449 REVERSE LENGTH=339	LOC_Os12g08760.1	protein|carboxyvinyl-carboxyphosphonate phosphorylmutase, putative, expressed	NA	NA	GO:0008152|metabolic process	GO:0003824|catalytic activity	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_05705	A	A2S	Potri.002G073800	Potri.002G073800(AS) Potri.002G074000(BS)	POPTR_0002s07460	sp|P00303|BABL_CUCSA	Basic blue protein OS=Cucumis sativus PE=1 SV=1	AT2G02850.1	| Symbols: ARPN | plantacyanin | chr2:826630-827720 REVERSE LENGTH=129	LOC_Os03g50160.1	protein|plastocyanin-like domain containing protein, putative, expressed	IMGA|Medtr5g006040.1	Early nodulin-like protein chr5 502223-501280 F EGN_Mt100125 20111014	GO:0009640|photomorphogenesis GO:0009737|response to abscisic acid stimulus GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009856|pollination GO:0009909|regulation of flower development GO:0009933|meristem structural organization GO:0010162|seed dormancy process GO:0010182|sugar mediated signaling pathway GO:0010228|vegetative to reproductive phase transition of meristem GO:0016567|protein ubiquitination GO:0019915|lipid storage GO:0048653|anther development GO:0050826|response to freezing	GO:0005507|copper ion binding GO:0009055|electron carrier activity	GO:0005886|plasma membrane GO:0048046|apoplast GO:0048196|plant extracellular matrix
pt2_05706	A	A2S	Potri.002G074100	Potri.002G074100(AS) Potri.002G221800(DS)	POPTR_0002s07470	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05707	A	A2S	Potri.002G073900	Potri.002G073900(AS) Potri.002G074200(BS)	POPTR_0002s07480	NA	NA	AT1G31130.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19950.1); Has 246 Blast hits to 244 proteins in 29 species: Archae - 2; Bacteria - 16; Metazoa - 0; Fungi - 0; Plants - 222; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). | chr1:11114963-11115928 REVERSE LENGTH=321	LOC_Os08g01590.1	protein|expressed protein	NA	NA	GO:0000165|MAPK cascade GO:0008150|biological_process GO:0009814|defense response, incompatible interaction GO:0048767|root hair elongation	GO:0003674|molecular_function	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0009507|chloroplast
pt2_05708	B	B1S	Potri.014G059400	Potri.014G059400(BS)	POPTR_0002s07490	NA	NA	AT4G15020.2	| Symbols: | hAT transposon superfamily | chr4:8575806-8578372 FORWARD LENGTH=768	LOC_Os03g60800.1	protein|transposon protein, putative, unclassified, expressed	IMGA|Medtr5g012510.1	hypothetical protein chr5 3512350-3509693 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003677|DNA binding GO:0046983|protein dimerization activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05709	A	A2S	Potri.002G074300	Potri.002G074300(AS) Potri.002G073900(DS)	POPTR_0002s07500	NA	NA	AT1G31130.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19950.1); Has 246 Blast hits to 244 proteins in 29 species: Archae - 2; Bacteria - 16; Metazoa - 0; Fungi - 0; Plants - 222; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). | chr1:11114963-11115928 REVERSE LENGTH=321	LOC_Os08g01590.1	protein|expressed protein	NA	NA	GO:0000165|MAPK cascade GO:0008150|biological_process GO:0009814|defense response, incompatible interaction GO:0048767|root hair elongation	GO:0003674|molecular_function	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0009507|chloroplast
pt2_05710	B	B1S	Potri.002G074400	Potri.002G074400(BS)	POPTR_0002s07510	sp|O23657|RABC1_ARATH	Ras-related protein RABC1 OS=Arabidopsis thaliana GN=RABC1 PE=2 SV=1	AT1G43890.3	| Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C1, RAB18 | RAB GTPASE HOMOLOG B18 | chr1:16646934-16648395 FORWARD LENGTH=212	LOC_Os03g05280.1	protein|ras-related protein, putative, expressed	IMGA|Medtr1g068730.1	Ras-like protein chr1 17072901-17066690 F EGN_Mt100125 20111014	GO:0007264|small GTPase mediated signal transduction GO:0015031|protein transport	GO:0005525|GTP binding	GO:0005886|plasma membrane
pt2_05711	B	B1S	Potri.002G074500	Potri.002G074500(BS)	POPTR_0002s07520	sp|Q8VZN9|P2C11_ARATH	Probable protein phosphatase 2C 11 OS=Arabidopsis thaliana GN=At1g43900 PE=2 SV=1	AT1G43900.1	| Symbols: | Protein phosphatase 2C family protein | chr1:16654045-16655810 FORWARD LENGTH=371	LOC_Os02g05630.4	protein|protein phosphatase 2C, putative, expressed	IMGA|Medtr1g013400.2	Protein phosphatase 2C chr1 3330870-3335489 F EGN_Mt100125 20111014	GO:0006470|protein dephosphorylation	GO:0003824|catalytic activity GO:0004722|protein serine/threonine phosphatase activity	GO:0005739|mitochondrion GO:0008287|protein serine/threonine phosphatase complex
pt2_05712	A	A1S	Potri.002G074600	Potri.002G074600(AS)	POPTR_0002s07530	sp|Q8GYX8|DNJ10_ARATH	Chaperone protein dnaJ 10 OS=Arabidopsis thaliana GN=ATJ10 PE=2 SV=2	AT1G77020.1	| Symbols: | DNAJ heat shock N-terminal domain-containing protein | chr1:28945056-28946867 REVERSE LENGTH=379	LOC_Os02g35000.1	protein|chaperone protein dnaJ 10, putative, expressed	IMGA|Medtr5g035770.1	Chaperone protein dnaJ chr5 15132063-15127235 F EGN_Mt100125 20111014	GO:0006457|protein folding	GO:0031072|heat shock protein binding GO:0051082|unfolded protein binding	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_05713	A	A1S	Potri.002G074700	Potri.002G074700(AS)	POPTR_0002s07540	sp|Q9LPL4|SKP2A_ARATH	F-box protein SKP2A OS=Arabidopsis thaliana GN=SKP2A PE=1 SV=1	AT1G21410.1	| Symbols: SKP2A | F-box/RNI-like superfamily protein | chr1:7497479-7499386 FORWARD LENGTH=360	LOC_Os05g35110.1	protein|OsFBL22 - F-box domain and LRR containing protein, expressed	NA	NA	GO:0010311|lateral root formation GO:0016567|protein ubiquitination GO:0031146|SCF-dependent proteasomal ubiquitin-dependent protein catabolic process GO:0045892|negative regulation of transcription, DNA-dependent GO:0051781|positive regulation of cell division GO:0071365|cellular response to auxin stimulus	GO:0004842|ubiquitin-protein ligase activity GO:0005515|protein binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0019005|SCF ubiquitin ligase complex
pt2_05714	A	A1S	Potri.002G074800	Potri.002G074800(AS)	POPTR_0002s07550	NA	NA	AT1G76990.5	| Symbols: ACR3 | ACT domain repeat 3 | chr1:28933387-28935179 FORWARD LENGTH=453	LOC_Os02g34990.1	protein|ACT domain containing protein, putative, expressed	IMGA|Medtr5g047260.1	ACR4 chr5 20288839-20285558 F EGN_Mt100125 20111014	GO:0006807|nitrogen compound metabolic process GO:0008152|metabolic process GO:0019243|methylglyoxal catabolic process to D-lactate GO:0019344|cysteine biosynthetic process	GO:0008773|[protein-PII] uridylyltransferase activity GO:0016597|amino acid binding	GO:0005829|cytosol
pt2_05715	A	A1S	Potri.002G074900	Potri.002G074900(AS)	POPTR_0002s07560	sp|Q54M22|ODBA_DICDI	2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Dictyostelium discoideum GN=bkdA PE=3 SV=1	AT1G21400.1	| Symbols: | Thiamin diphosphate-binding fold (THDP-binding) superfamily protein | chr1:7493492-7496240 FORWARD LENGTH=472	LOC_Os12g08260.3	protein|dehydrogenase E1 component domain containing protein, expressed	IMGA|Medtr5g036600.1	Pyruvate dehydrogenase E1 component alpha subunit chr5 15561806-15555291 F EGN_Mt100125 20111014	GO:0008152|metabolic process	GO:0003863|3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity GO:0016624|oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	GO:0005739|mitochondrion
pt2_05716	R	R	NA	NA	POPTR_0002s07570	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05717	A	A1S	Potri.002G075200	Potri.002G075200(AS)	POPTR_0002s07580	sp|O49287|PP127_ARATH	Putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E5 PE=3 SV=1	AT1G77010.1	| Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:28942710-28944797 FORWARD LENGTH=695	LOC_Os03g63260.1	protein|pentatricopeptide, putative, expressed	IMGA|Medtr1g007600.1	Pentatricopeptide repeat-containing protein chr1 1022538-1020055 H EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005739|mitochondrion
pt2_05718	A	A1S	Potri.002G075300	Potri.002G075300(AS)	POPTR_0002s07590	sp|Q9LRV2|PP256_ARATH	Pentatricopeptide repeat-containing protein At3g26540 OS=Arabidopsis thaliana GN=PCMP-A5 PE=2 SV=1	AT3G26540.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:9744542-9746644 REVERSE LENGTH=700	LOC_Os04g35650.1	protein|pentatricopeptide, putative, expressed	IMGA|contig_55039_1.1	Pentatricopeptide repeat-containing protein contig_55039 274-3090 H PREDN 20111014	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_05719	A	A1S	Potri.002G075400	Potri.002G075400(AS)	POPTR_0002s07600	NA	NA	AT1G76980.2	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: embryo defective 2170 (TAIR:AT1G21390.1); Has 61 Blast hits to 61 proteins in 18 species: Archae - 0; Bacteria - 8; Metazoa - 8; Fungi - 2; Plants - 40; Viruses - 3; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:28926086-28927242 REVERSE LENGTH=250	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05720	A	A1S	Potri.002G075400	Potri.002G075400(AS)	POPTR_0002s07600	NA	NA	AT1G76980.2	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: embryo defective 2170 (TAIR:AT1G21390.1); Has 61 Blast hits to 61 proteins in 18 species: Archae - 0; Bacteria - 8; Metazoa - 8; Fungi - 2; Plants - 40; Viruses - 3; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:28926086-28927242 REVERSE LENGTH=250	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05721	A	A1S	Potri.002G075500	Potri.002G075500(AS)	POPTR_0002s07610	sp|Q68FJ8|TM1L2_XENLA	TOM1-like protein 2 OS=Xenopus laevis GN=tom1l2 PE=2 SV=1	AT1G21380.1	| Symbols: | Target of Myb protein 1 | chr1:7485806-7488032 REVERSE LENGTH=506	LOC_Os11g09329.1	protein|VHS and GAT domain containing protein, expressed	IMGA|Medtr5g007480.1	Hepatocyte growth factor-regulated tyrosine kinase substrate chr5 1139730-1135656 F EGN_Mt100125 20111014	GO:0006886|intracellular protein transport GO:0006891|intra-Golgi vesicle-mediated transport	GO:0008565|protein transporter activity	GO:0005622|intracellular GO:0005795|Golgi stack
pt2_05722	A	A1A	Potri.002G075600	Potri.002G075600(AA)	POPTR_0002s07620	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05723	A	A1S	Potri.002G075700	Potri.002G075700(AS)	POPTR_0002s07630	NA	NA	AT1G44000.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11911.1); Has 216 Blast hits to 212 proteins in 76 species: Archae - 0; Bacteria - 96; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr1:16708201-16709521 REVERSE LENGTH=260	LOC_Os09g36200.1	protein|senescence-inducible chloroplast stay-green protein 1, putative, expressed	IMGA|Medtr5g011120.1	Senescence-inducible chloroplast stay-green protein chr5 2919163-2920896 F EGN_Mt100125 20111014	GO:0009658|chloroplast organization	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_05724	A	A1S	Potri.002G075800	Potri.002G075800(AS)	POPTR_0002s07640	sp|Q6NPR7|PMTO_ARATH	Probable methyltransferase PMT24 OS=Arabidopsis thaliana GN=At1g29470 PE=1 SV=1	AT1G29470.2	| Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr1:10310424-10313369 REVERSE LENGTH=770	LOC_Os01g66110.2	protein|methyltransferase, putative, expressed	IMGA|Medtr5g021100.1	Ankyrin-like protein chr5 7837702-7834508 H EGN_Mt100125 20111014	NA	GO:0008168|methyltransferase activity	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0009506|plasmodesma
pt2_05725	A	A2S	Potri.002G075900	Potri.002G075900(AS) Potri.002G076000(BS)	POPTR_0002s07650	sp|Q9LMP1|WAK2_ARATH	Wall-associated receptor kinase 2 OS=Arabidopsis thaliana GN=WAK2 PE=1 SV=1	AT1G21270.1	| Symbols: WAK2 | wall-associated kinase 2 | chr1:7444997-7447345 FORWARD LENGTH=732	LOC_Os04g51040.1	protein|OsWAK50 - OsWAK receptor-like protein kinase, expressed	IMGA|Medtr5g018570.1	Kinase-like protein chr5 6674294-6679204 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0009311|oligosaccharide metabolic process GO:0009751|response to salicylic acid stimulus GO:0009793|embryo development ending in seed dormancy GO:0009826|unidimensional cell growth GO:0009992|cellular water homeostasis GO:0010027|thylakoid membrane organization GO:0010228|vegetative to reproductive phase transition of meristem GO:0016226|iron-sulfur cluster assembly GO:0019761|glucosinolate biosynthetic process GO:0048481|ovule development	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005509|calcium ion binding GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_05726	A	A2S	Potri.002G076000	Potri.002G076000(AS) Potri.002G075900(BS)	POPTR_0002s07660	sp|Q9LMP1|WAK2_ARATH	Wall-associated receptor kinase 2 OS=Arabidopsis thaliana GN=WAK2 PE=1 SV=1	AT1G21270.1	| Symbols: WAK2 | wall-associated kinase 2 | chr1:7444997-7447345 FORWARD LENGTH=732	LOC_Os04g51040.1	protein|OsWAK50 - OsWAK receptor-like protein kinase, expressed	IMGA|Medtr5g018570.1	Kinase-like protein chr5 6674294-6679204 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0009311|oligosaccharide metabolic process GO:0009751|response to salicylic acid stimulus GO:0009793|embryo development ending in seed dormancy GO:0009826|unidimensional cell growth GO:0009992|cellular water homeostasis GO:0010027|thylakoid membrane organization GO:0010228|vegetative to reproductive phase transition of meristem GO:0016226|iron-sulfur cluster assembly GO:0019761|glucosinolate biosynthetic process GO:0048481|ovule development	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005509|calcium ion binding GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_05727	A	A1S	Potri.002G076100	Potri.002G076100(AS)	POPTR_0002s07670	sp|Q9LMP1|WAK2_ARATH	Wall-associated receptor kinase 2 OS=Arabidopsis thaliana GN=WAK2 PE=1 SV=1	AT1G21270.1	| Symbols: WAK2 | wall-associated kinase 2 | chr1:7444997-7447345 FORWARD LENGTH=732	LOC_Os02g02120.1	protein|OsWAK11 - OsWAK receptor-like protein kinase, expressed	IMGA|contig_165180_1.1	Protein kinase family protein contig_165180 198-1567 H PREDN 20111014	GO:0006468|protein phosphorylation GO:0009311|oligosaccharide metabolic process GO:0009751|response to salicylic acid stimulus GO:0009793|embryo development ending in seed dormancy GO:0009826|unidimensional cell growth GO:0009992|cellular water homeostasis GO:0010027|thylakoid membrane organization GO:0010228|vegetative to reproductive phase transition of meristem GO:0016226|iron-sulfur cluster assembly GO:0019761|glucosinolate biosynthetic process GO:0048481|ovule development	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005509|calcium ion binding GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_05728	A	A1S	Potri.002G076200	Potri.002G076200(AS)	POPTR_0002s07680	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006499|N-terminal protein myristoylation	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05729	B	B1S	Potri.002G076400	Potri.002G076400(BS)	POPTR_0002s07690	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05730	A	A1S	Potri.002G076500	Potri.002G076500(AS)	POPTR_0002s07700	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05731	A	A1S	Potri.002G076600	Potri.002G076600(AS)	POPTR_0002s07710	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05732	A	A1S	Potri.002G076700	Potri.002G076700(AS)	POPTR_0002s07720	sp|Q5M990|TTC33_XENLA	Tetratricopeptide repeat protein 33 OS=Xenopus laevis GN=ttc33 PE=2 SV=1	AT1G77230.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:29016129-29017873 FORWARD LENGTH=218	LOC_Os02g34830.1	protein|tetratricopeptide repeat domain containing protein, expressed	NA	NA	GO:0008150|biological_process	NA	NA
pt2_05733	A	A1S	Potri.002G076700	Potri.002G076700(AS)	POPTR_0002s07720	sp|Q5M990|TTC33_XENLA	Tetratricopeptide repeat protein 33 OS=Xenopus laevis GN=ttc33 PE=2 SV=1	AT1G77230.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:29016129-29017873 FORWARD LENGTH=218	LOC_Os02g34830.1	protein|tetratricopeptide repeat domain containing protein, expressed	NA	NA	GO:0008150|biological_process	NA	NA
pt2_05734	A	A1S	Potri.002G076800	Potri.002G076800(AS)	POPTR_0002s07730	sp|Q00763|COMT1_POPTM	Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1	AT5G54160.1	| Symbols: ATOMT1, OMT1 | O-methyltransferase 1 | chr5:21982075-21984167 FORWARD LENGTH=363	LOC_Os08g06100.1	protein|O-methyltransferase, putative, expressed	IMGA|Medtr5g098170.1	Caffeic acid 3-O-methyltransferase chr5 41960364-41963829 F EGN_Mt100125 20111014	GO:0006598|polyamine catabolic process GO:0009611|response to wounding GO:0009698|phenylpropanoid metabolic process GO:0009805|coumarin biosynthetic process GO:0009809|lignin biosynthetic process GO:0009963|positive regulation of flavonoid biosynthetic process GO:0016126|sterol biosynthetic process GO:0042398|cellular modified amino acid biosynthetic process GO:0051555|flavonol biosynthetic process	GO:0030744|luteolin O-methyltransferase activity GO:0030755|quercetin 3-O-methyltransferase activity GO:0033799|myricetin 3'-O-methyltransferase activity GO:0047763|caffeate O-methyltransferase activity	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_05735	A	A2S	Potri.002G076900	Potri.002G076900(AS) Potri.005G183700(DS)	POPTR_0002s07740	sp|Q6PDK2|MLL2_MOUSE	Histone-lysine N-methyltransferase MLL2 OS=Mus musculus GN=Mll2 PE=1 SV=2	AT1G77250.1	| Symbols: | RING/FYVE/PHD-type zinc finger family protein | chr1:29020444-29022938 REVERSE LENGTH=522	LOC_Os08g01420.1	protein|PHD-finger domain containing protein, putative, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_05736	A	A1S	Potri.002G077000	Potri.002G077000(AS)	POPTR_0002s07750	sp|Q6DBN1|Y4845_ARATH	BTB/POZ domain-containing protein At4g08455 OS=Arabidopsis thaliana GN=At4g08455 PE=1 SV=1	AT4G08455.1	| Symbols: | BTB/POZ domain-containing protein | chr4:5375891-5376922 FORWARD LENGTH=243	LOC_Os07g15490.1	protein|C2-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with C2 subfamily conserved sequence, expressed	IMGA|Medtr5g096790.1	Speckle-type POZ protein-like A chr5 41293109-41291345 H EGN_Mt100125 20111014	NA	GO:0005515|protein binding	GO:0005737|cytoplasm
pt2_05737	B	B1S	Potri.002G077100	Potri.002G077100(BS)	POPTR_0002s07760	sp|Q94KE1|PMTA_ARATH	Probable methyltransferase PMT10 OS=Arabidopsis thaliana GN=At1g77260 PE=2 SV=1	AT1G77260.1	| Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr1:29023961-29026699 REVERSE LENGTH=655	LOC_Os01g62800.1	protein|methyltransferase, putative, expressed	IMGA|Medtr5g080720.1	hypothetical protein chr5 33551451-33545349 H EGN_Mt100125 20111014	NA	GO:0008168|methyltransferase activity	GO:0005794|Golgi apparatus
pt2_05738	A	A2S	Potri.002G077200	Potri.002G077200(AS) Potri.005G183400(DS)	POPTR_0002s07770	sp|Q8CFV9|RIFK_MOUSE	Riboflavin kinase OS=Mus musculus GN=Rfk PE=2 SV=2	AT4G21470.1	| Symbols: ATFMN/FHY, FMN/FHY | riboflavin kinase/FMN hydrolase | chr4:11431284-11433197 FORWARD LENGTH=379	LOC_Os10g32730.1	protein|haloacid dehalogenase-like hydrolase domain-containing protein 1A, putative, expressed	NA	NA	GO:0008152|metabolic process GO:0009231|riboflavin biosynthetic process GO:0016036|cellular response to phosphate starvation GO:0019375|galactolipid biosynthetic process GO:0045892|negative regulation of transcription, DNA-dependent	GO:0003824|catalytic activity GO:0003919|FMN adenylyltransferase activity GO:0008531|riboflavin kinase activity GO:0016787|hydrolase activity	GO:0009507|chloroplast
pt2_05739	A	A1S	Potri.002G077300	Potri.002G077300(AS)	POPTR_0002s07780	sp|Q9LPK5|CML44_ARATH	Probable calcium-binding protein CML44 OS=Arabidopsis thaliana GN=CML44 PE=2 SV=2	AT1G21550.1	| Symbols: | Calcium-binding EF-hand family protein | chr1:7553317-7553784 REVERSE LENGTH=155	LOC_Os12g12730.1	protein|OsCML28 - Calmodulin-related calcium sensor protein, expressed	IMGA|Medtr5g079340.1	Polcalcin Nic t chr5 32914810-32913864 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0005509|calcium ion binding	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_05740	A	A1S	Potri.002G077400	Potri.002G077400(AS)	POPTR_0002s07790	sp|Q9C5I1|USP_ARATH	UDP-sugar pyrophosphorylase OS=Arabidopsis thaliana GN=USP PE=1 SV=1	AT5G52560.1	| Symbols: ATUSP, USP | UDP-sugar pyrophosphorylase | chr5:21331230-21334573 FORWARD LENGTH=614	LOC_Os06g48760.1	protein|UTP--glucose-1-phosphate uridylyltransferase, putative, expressed	NA	NA	GO:0006011|UDP-glucose metabolic process GO:0008152|metabolic process GO:0009555|pollen development GO:0033356|UDP-L-arabinose metabolic process GO:0046398|UDP-glucuronate metabolic process GO:0046686|response to cadmium ion GO:0052573|UDP-D-galactose metabolic process	GO:0003983|UTP:glucose-1-phosphate uridylyltransferase activity GO:0010491|UTP:arabinose-1-phosphate uridylyltransferase activity GO:0016779|nucleotidyltransferase activity GO:0017103|UTP:galactose-1-phosphate uridylyltransferase activity GO:0047338|UTP:xylose-1-phosphate uridylyltransferase activity GO:0047350|glucuronate-1-phosphate uridylyltransferase activity GO:0051748|UTP-monosaccharide-1-phosphate uridylyltransferase activity	GO:0005829|cytosol GO:0009507|chloroplast GO:0090406|pollen tube
pt2_05741	A	A2S	Potri.002G077500	Potri.002G077500(AS) Potri.002G077600(AA)	POPTR_0002s07800	NA	NA	AT1G21560.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01170.1); Has 76 Blast hits to 76 proteins in 15 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 2; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:7555430-7556789 FORWARD LENGTH=325	LOC_Os05g34920.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05742	A	A1S	Potri.002G077700	Potri.002G077700(AS)	POPTR_0002s07810	sp|Q3ED78|C3H7_ARATH	Zinc finger CCCH domain-containing protein 7 OS=Arabidopsis thaliana GN=At1g21570 PE=1 SV=1	AT1G21580.1	| Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family protein | chr1:7557822-7565655 REVERSE LENGTH=2166	LOC_Os06g43120.1	protein|zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	IMGA|contig_52478_1.1	mRNA 3'-end-processing protein YTH1 contig_52478 5360-1526 E PREDN 20111014	GO:0008150|biological_process	GO:0003676|nucleic acid binding GO:0008270|zinc ion binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05743	A	A1S	Potri.002G077900	Potri.002G077900(AS)	POPTR_0002s07820	sp|Q8H1D6|RBK1_ARATH	Receptor-like cytosolic serine/threonine-protein kinase RBK1 OS=Arabidopsis thaliana GN=RBK1 PE=1 SV=1	AT1G77280.1	| Symbols: | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain | chr1:29031468-29035882 REVERSE LENGTH=794	LOC_Os11g08950.1	protein|protein kinase family protein, putative, expressed	IMGA|Medtr5g031870.1	Cysteine-rich receptor-like protein kinase chr5 13243275-13248409 E EGN_Mt100125 20111014	GO:0002238|response to molecule of fungal origin GO:0006468|protein phosphorylation GO:0006950|response to stress	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005575|cellular_component GO:0005886|plasma membrane
pt2_05744	A	A1S	Potri.002G077900	Potri.002G077900(AS)	POPTR_0002s07820	sp|Q8H1D6|RBK1_ARATH	Receptor-like cytosolic serine/threonine-protein kinase RBK1 OS=Arabidopsis thaliana GN=RBK1 PE=1 SV=1	AT1G77280.1	| Symbols: | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain | chr1:29031468-29035882 REVERSE LENGTH=794	LOC_Os11g08950.1	protein|protein kinase family protein, putative, expressed	IMGA|Medtr5g031870.1	Cysteine-rich receptor-like protein kinase chr5 13243275-13248409 E EGN_Mt100125 20111014	GO:0002238|response to molecule of fungal origin GO:0006468|protein phosphorylation GO:0006950|response to stress	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005575|cellular_component GO:0005886|plasma membrane
pt2_05745	A	A2S	Potri.002G078000	Potri.002G078000(AS) Potri.002G078200(DS)	POPTR_0002s07830	sp|D8WUA4|SECA2_ARATH	Protein translocase subunit SECA2, chloroplastic OS=Arabidopsis thaliana GN=SECA2 PE=2 SV=1	AT1G21650.2	| Symbols: SECA2 | Preprotein translocase SecA family protein | chr1:7592891-7600590 REVERSE LENGTH=1058	LOC_Os11g08980.1	protein|preprotein translocase secA family protein, putative, expressed	IMGA|Medtr1g086050.1	Protein translocase subunit secA chr1 22857509-22845232 E EGN_Mt100125 20111014	GO:0006605|protein targeting GO:0006886|intracellular protein transport GO:0009790|embryo development GO:0017038|protein import	GO:0005524|ATP binding GO:0008270|zinc ion binding	GO:0005886|plasma membrane GO:0009536|plastid GO:0009941|chloroplast envelope GO:0016020|membrane
pt2_05746	A	A2S	Potri.002G078300	Potri.002G078300(AS) Potri.002G078500(BS)	POPTR_0002s07840	sp|O60113|YG64_SCHPO	Uncharacterized amino-acid permease C15C4.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC15C4.04c PE=2 SV=1	AT2G01170.1	| Symbols: BAT1 | bidirectional amino acid transporter 1 | chr2:102364-104462 REVERSE LENGTH=516	LOC_Os04g35540.1	protein|amino acid permease family protein, putative, expressed	NA	NA	GO:0003333|amino acid transmembrane transport GO:0015812|gamma-aminobutyric acid transport	GO:0005313|L-glutamate transmembrane transporter activity GO:0015171|amino acid transmembrane transporter activity GO:0015180|L-alanine transmembrane transporter activity GO:0015181|arginine transmembrane transporter activity GO:0015185|gamma-aminobutyric acid transmembrane transporter activity GO:0015189|L-lysine transmembrane transporter activity	GO:0005739|mitochondrion GO:0016020|membrane GO:0016021|integral to membrane
pt2_05747	C	C1S	Potri.002G078200	Potri.002G078200(CS)	sp|D8WUA4|SECA2_ARATH	Protein translocase subunit SECA2, chloroplastic OS=Arabidopsis thaliana GN=SECA2 PE=2 SV=1	AT1G21650.1	| Symbols: SECA2 | Preprotein translocase SecA family protein | chr1:7592891-7600590 REVERSE LENGTH=1051	LOC_Os11g08980.1	protein|preprotein translocase secA family protein, putative, expressed	NA	NA	GO:0006605|protein targeting GO:0006886|intracellular protein transport GO:0009790|embryo development GO:0017038|protein import	GO:0005524|ATP binding GO:0008270|zinc ion binding	GO:0005886|plasma membrane GO:0009536|plastid GO:0009941|chloroplast envelope GO:0016020|membrane
pt2_05748	A	A1S	Potri.002G078100	Potri.002G078100(AS)	POPTR_0002s07860	sp|O60113|YG64_SCHPO	Uncharacterized amino-acid permease C15C4.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC15C4.04c PE=2 SV=1	AT2G01170.1	| Symbols: BAT1 | bidirectional amino acid transporter 1 | chr2:102364-104462 REVERSE LENGTH=516	LOC_Os04g35540.1	protein|amino acid permease family protein, putative, expressed	NA	NA	GO:0003333|amino acid transmembrane transport GO:0015812|gamma-aminobutyric acid transport	GO:0005313|L-glutamate transmembrane transporter activity GO:0015171|amino acid transmembrane transporter activity GO:0015180|L-alanine transmembrane transporter activity GO:0015181|arginine transmembrane transporter activity GO:0015185|gamma-aminobutyric acid transmembrane transporter activity GO:0015189|L-lysine transmembrane transporter activity	GO:0005739|mitochondrion GO:0016020|membrane GO:0016021|integral to membrane
pt2_05749	A	A3S	Potri.002G078500	Potri.002G078500(AS) Potri.002G078300(DS) Potri.002G078100(DS)	POPTR_0002s07870	sp|O60113|YG64_SCHPO	Uncharacterized amino-acid permease C15C4.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC15C4.04c PE=2 SV=1	AT2G01170.1	| Symbols: BAT1 | bidirectional amino acid transporter 1 | chr2:102364-104462 REVERSE LENGTH=516	LOC_Os04g35540.1	protein|amino acid permease family protein, putative, expressed	NA	NA	GO:0003333|amino acid transmembrane transport GO:0015812|gamma-aminobutyric acid transport	GO:0005313|L-glutamate transmembrane transporter activity GO:0015171|amino acid transmembrane transporter activity GO:0015180|L-alanine transmembrane transporter activity GO:0015181|arginine transmembrane transporter activity GO:0015185|gamma-aminobutyric acid transmembrane transporter activity GO:0015189|L-lysine transmembrane transporter activity	GO:0005739|mitochondrion GO:0016020|membrane GO:0016021|integral to membrane
pt2_05750	A	A1S	Potri.002G078600	Potri.002G078600(AS)	POPTR_0002s07880	sp|Q0WPW4|ACCO5_ARATH	1-aminocyclopropane-1-carboxylate oxidase 5 OS=Arabidopsis thaliana GN=At1g77330 PE=2 SV=1	AT1G77330.1	| Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr1:29063215-29064447 REVERSE LENGTH=307	LOC_Os05g05680.1	protein|1-aminocyclopropane-1-carboxylate oxidase, putative, expressed	IMGA|Medtr5g085330.2	1-aminocyclopropane-1-carboxylate oxidase chr5 35861279-35859475 F EGN_Mt100125 20111014	GO:0006826|iron ion transport GO:0009693|ethylene biosynthetic process GO:0010106|cellular response to iron ion starvation GO:0010167|response to nitrate GO:0015706|nitrate transport GO:0016132|brassinosteroid biosynthetic process GO:0055114|oxidation-reduction process	GO:0009815|1-aminocyclopropane-1-carboxylate oxidase activity GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_05751	A	A2S	Potri.002G078700	Potri.002G078700(AS) Potri.005G182600(DS)	POPTR_0002s07890	sp|Q9C5W3|NADK2_ARATH	NAD kinase 2, chloroplastic OS=Arabidopsis thaliana GN=NADK2 PE=1 SV=1	AT1G21640.1	| Symbols: NADK2, ATNADK2 | NAD kinase 2 | chr1:7588726-7592669 FORWARD LENGTH=985	LOC_Os11g08670.1	protein|NAD kinase, putative, expressed	NA	NA	GO:0008152|metabolic process GO:0019363|pyridine nucleotide biosynthetic process	GO:0003951|NAD+ kinase activity GO:0005516|calmodulin binding	GO:0009507|chloroplast
pt2_05752	A	A1S	Potri.002G078800	Potri.002G078800(AS)	POPTR_0002s07900	NA	NA	AT1G77310.1	| Symbols: | BEST Arabidopsis thaliana protein match is: wound-responsive family protein (TAIR:AT1G21610.1); Has 493 Blast hits to 482 proteins in 163 species: Archae - 0; Bacteria - 100; Metazoa - 172; Fungi - 66; Plants - 65; Viruses - 7; Other Eukaryotes - 83 (source: NCBI BLink). | chr1:29051671-29056179 FORWARD LENGTH=717	LOC_Os01g66050.1	protein|wound-responsive family protein, putative, expressed	NA	NA	GO:0006635|fatty acid beta-oxidation GO:0009611|response to wounding GO:0016558|protein import into peroxisome matrix	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_05753	A	A1S	Potri.002G078800	Potri.002G078800(AS)	POPTR_0002s07900	NA	NA	AT1G77310.1	| Symbols: | BEST Arabidopsis thaliana protein match is: wound-responsive family protein (TAIR:AT1G21610.1); Has 493 Blast hits to 482 proteins in 163 species: Archae - 0; Bacteria - 100; Metazoa - 172; Fungi - 66; Plants - 65; Viruses - 7; Other Eukaryotes - 83 (source: NCBI BLink). | chr1:29051671-29056179 FORWARD LENGTH=717	LOC_Os01g66050.1	protein|wound-responsive family protein, putative, expressed	NA	NA	GO:0006635|fatty acid beta-oxidation GO:0009611|response to wounding GO:0016558|protein import into peroxisome matrix	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_05754	A	A1S	Potri.002G078800	Potri.002G078800(AS)	POPTR_0002s07900	NA	NA	AT1G77310.1	| Symbols: | BEST Arabidopsis thaliana protein match is: wound-responsive family protein (TAIR:AT1G21610.1); Has 493 Blast hits to 482 proteins in 163 species: Archae - 0; Bacteria - 100; Metazoa - 172; Fungi - 66; Plants - 65; Viruses - 7; Other Eukaryotes - 83 (source: NCBI BLink). | chr1:29051671-29056179 FORWARD LENGTH=717	LOC_Os01g66050.1	protein|wound-responsive family protein, putative, expressed	NA	NA	GO:0006635|fatty acid beta-oxidation GO:0009611|response to wounding GO:0016558|protein import into peroxisome matrix	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_05755	A	A1S	Potri.002G078900	Potri.002G078900(AS)	POPTR_0002s07910	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006364|rRNA processing GO:0006417|regulation of translation GO:0009657|plastid organization GO:0009902|chloroplast relocation GO:0009965|leaf morphogenesis GO:0010027|thylakoid membrane organization GO:0010207|photosystem II assembly GO:0030154|cell differentiation GO:0034660|ncRNA metabolic process GO:0035304|regulation of protein dephosphorylation GO:0042793|transcription from plastid promoter GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003674|molecular_function	GO:0009295|nucleoid GO:0009507|chloroplast GO:0009508|plastid chromosome
pt2_05756	A	A2S	Potri.002G079000	Potri.002G079000(AS) Potri.005G182200(BS)	POPTR_0002s07920	sp|Q07474|MADS2_PETHY	Floral homeotic protein PMADS 2 OS=Petunia hybrida GN=PMADS2 PE=2 SV=1	AT5G20240.1	| Symbols: PI | K-box region and MADS-box transcription factor family protein | chr5:6829203-6831208 FORWARD LENGTH=208	LOC_Os05g34940.2	protein|OsMADS4 - MADS-box family gene with MIKCc type-box, expressed	IMGA|Medtr5g021270.1	MADS box transcription factor TM6 chr5 7943940-7945856 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0048481|ovule development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0046983|protein dimerization activity	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_05757	A	A1S	Potri.002G079100	Potri.002G079100(AS)	POPTR_0002s07930	sp|Q2LAE1|ASHH2_ARATH	Histone-lysine N-methyltransferase ASHH2 OS=Arabidopsis thaliana GN=ASHH2 PE=1 SV=1	AT1G77300.1	| Symbols: EFS, SDG8, CCR1, ASHH2, LAZ2 | histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific) | chr1:29040160-29048810 REVERSE LENGTH=1805	LOC_Os02g34850.1	protein|histone-lysine N-methyltransferase ASHH2, putative, expressed	IMGA|Medtr1g097760.1	Histone-lysine N-methyltransferase NSD3 chr1 27951022-27958584 H EGN_Mt100125 20111014	GO:0009553|embryo sac development GO:0009555|pollen development GO:0009910|negative regulation of flower development GO:0010223|secondary shoot formation GO:0010363|regulation of plant-type hypersensitive response GO:0010452|histone H3-K36 methylation GO:0016116|carotenoid metabolic process GO:0031062|positive regulation of histone methylation GO:0040029|regulation of gene expression, epigenetic GO:0043067|regulation of programmed cell death GO:0048481|ovule development GO:0048653|anther development	GO:0008270|zinc ion binding GO:0018024|histone-lysine N-methyltransferase activity GO:0042800|histone methyltransferase activity (H3-K4 specific)	GO:0005634|nucleus
pt2_05758	A	A1S	Potri.002G079200	Potri.002G079200(AS)	POPTR_0002s07940	sp|Q0WQ57|AUXI2_ARATH	Auxilin-related protein 2 OS=Arabidopsis thaliana GN=At4g12770 PE=1 SV=1	AT1G21660.1	| Symbols: | Chaperone DnaJ-domain superfamily protein | chr1:7605924-7608835 FORWARD LENGTH=523	LOC_Os11g43950.1	protein|dnaJ domain containing protein, expressed	NA	NA	NA	GO:0031072|heat shock protein binding	GO:0005634|nucleus
pt2_05759	A	A1S	Potri.002G079300	Potri.002G079300(AS)	POPTR_0002s07950	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05760	A	A1S	Potri.002G079400	Potri.002G079400(AS)	POPTR_0002s07960	sp|Q39134|AAP3_ARATH	Amino acid permease 3 OS=Arabidopsis thaliana GN=AAP3 PE=1 SV=2	AT1G77380.1	| Symbols: AAP3, ATAAP3 | amino acid permease 3 | chr1:29075201-29077252 REVERSE LENGTH=476	LOC_Os05g34980.1	protein|amino acid transporter, putative, expressed	IMGA|contig_83375_1.1	Amino acid permease contig_83375 575-3289 E PREDN 20111014	GO:0006612|protein targeting to membrane GO:0006820|anion transport GO:0006862|nucleotide transport GO:0006865|amino acid transport GO:0006888|ER to Golgi vesicle-mediated transport GO:0006944|cellular membrane fusion GO:0010363|regulation of plant-type hypersensitive response GO:0015696|ammonium transport GO:0015802|basic amino acid transport GO:0043069|negative regulation of programmed cell death GO:0043090|amino acid import GO:0043269|regulation of ion transport	GO:0015171|amino acid transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_05761	A	A3S	Potri.002G079500	Potri.002G079500(AS) Potri.002G079700(BS) Potri.T152100(BS)	POPTR_0002s07970	sp|Q39134|AAP3_ARATH	Amino acid permease 3 OS=Arabidopsis thaliana GN=AAP3 PE=1 SV=2	AT1G77380.1	| Symbols: AAP3, ATAAP3 | amino acid permease 3 | chr1:29075201-29077252 REVERSE LENGTH=476	LOC_Os05g34980.1	protein|amino acid transporter, putative, expressed	IMGA|contig_83375_1.1	Amino acid permease contig_83375 575-3289 E PREDN 20111014	GO:0006612|protein targeting to membrane GO:0006820|anion transport GO:0006862|nucleotide transport GO:0006865|amino acid transport GO:0006888|ER to Golgi vesicle-mediated transport GO:0006944|cellular membrane fusion GO:0010363|regulation of plant-type hypersensitive response GO:0015696|ammonium transport GO:0015802|basic amino acid transport GO:0043069|negative regulation of programmed cell death GO:0043090|amino acid import GO:0043269|regulation of ion transport	GO:0015171|amino acid transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_05762	A	A1S	Potri.002G079600	Potri.002G079600(AS)	POPTR_0002s07980	sp|Q8H0W1|PLSP1_ARATH	Chloroplast processing peptidase OS=Arabidopsis thaliana GN=PLSP1 PE=2 SV=2	AT3G24590.1	| Symbols: PLSP1 | plastidic type i signal peptidase 1 | chr3:8970694-8972020 FORWARD LENGTH=291	LOC_Os02g16709.1	protein|peptidase, putative, expressed	NA	NA	GO:0006364|rRNA processing GO:0006508|proteolysis GO:0009902|chloroplast relocation GO:0010027|thylakoid membrane organization GO:0010207|photosystem II assembly GO:0010267|production of ta-siRNAs involved in RNA interference GO:0019761|glucosinolate biosynthetic process GO:0034660|ncRNA metabolic process GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0035304|regulation of protein dephosphorylation GO:0042793|transcription from plastid promoter GO:0045893|positive regulation of transcription, DNA-dependent GO:0051604|protein maturation GO:0051607|defense response to virus	GO:0008233|peptidase activity GO:0008236|serine-type peptidase activity	GO:0009507|chloroplast GO:0009526|plastid envelope GO:0009535|chloroplast thylakoid membrane GO:0016020|membrane
pt2_05763	A	A2S	Potri.002G079700	Potri.002G079700(AS) Potri.002G079500(BS)	POPTR_0002s08000	sp|Q39134|AAP3_ARATH	Amino acid permease 3 OS=Arabidopsis thaliana GN=AAP3 PE=1 SV=2	AT1G77380.1	| Symbols: AAP3, ATAAP3 | amino acid permease 3 | chr1:29075201-29077252 REVERSE LENGTH=476	LOC_Os05g34980.1	protein|amino acid transporter, putative, expressed	IMGA|contig_83375_1.1	Amino acid permease contig_83375 575-3289 E PREDN 20111014	GO:0006612|protein targeting to membrane GO:0006820|anion transport GO:0006862|nucleotide transport GO:0006865|amino acid transport GO:0006888|ER to Golgi vesicle-mediated transport GO:0006944|cellular membrane fusion GO:0010363|regulation of plant-type hypersensitive response GO:0015696|ammonium transport GO:0015802|basic amino acid transport GO:0043069|negative regulation of programmed cell death GO:0043090|amino acid import GO:0043269|regulation of ion transport	GO:0015171|amino acid transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_05764	A	A1S	Potri.002G079900	Potri.002G079900(AS)	POPTR_0002s08010	sp|Q28TS0|TOLB_JANSC	Protein TolB OS=Jannaschia sp. (strain CCS1) GN=tolB PE=3 SV=1	AT1G21680.1	| Symbols: | DPP6 N-terminal domain-like protein | chr1:7613028-7615148 FORWARD LENGTH=706	LOC_Os03g62370.1	protein|WD40-like Beta Propeller Repeat family protein, expressed	NA	NA	GO:0008150|biological_process GO:0019243|methylglyoxal catabolic process to D-lactate	GO:0003674|molecular_function	GO:0005576|extracellular region GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0009505|plant-type cell wall
pt2_05765	A	A1S	Potri.002G080000	Potri.002G080000(AS)	POPTR_0002s08020	sp|Q9C6Y3|CCA11_ARATH	Cyclin-A1-1 OS=Arabidopsis thaliana GN=CYCA1-1 PE=1 SV=1	AT1G44110.1	| Symbols: CYCA1;1 | Cyclin A1;1 | chr1:16775035-16777182 REVERSE LENGTH=460	LOC_Os12g20324.1	protein|cyclin-A1, putative, expressed	IMGA|Medtr1g011470.1	Cyclin chr1 2363745-2358343 H EGN_Mt100125 20111014	GO:0000079|regulation of cyclin-dependent protein kinase activity GO:0006260|DNA replication GO:0006270|DNA replication initiation GO:0006275|regulation of DNA replication GO:0006306|DNA methylation GO:0008283|cell proliferation GO:0009909|regulation of flower development GO:0010103|stomatal complex morphogenesis GO:0010389|regulation of G2/M transition of mitotic cell cycle GO:0010583|response to cyclopentenone GO:0016458|gene silencing GO:0016572|histone phosphorylation GO:0034968|histone lysine methylation GO:0042127|regulation of cell proliferation GO:0051567|histone H3-K9 methylation GO:0051726|regulation of cell cycle	GO:0005515|protein binding GO:0016538|cyclin-dependent protein kinase regulator activity GO:0019901|protein kinase binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_05766	A	A3S	Potri.T152000	Potri.T152000(AS) Potri.002G080100(BS) Potri.005G181300(DS)	POPTR_0002s08030	sp|Q99J62|RFC4_MOUSE	Replication factor C subunit 4 OS=Mus musculus GN=Rfc4 PE=1 SV=1	AT1G21690.1	| Symbols: EMB1968, RFC4 | ATPase family associated with various cellular activities (AAA) | chr1:7615675-7618362 FORWARD LENGTH=339	LOC_Os12g07720.1	protein|RFC4 - Putative clamp loader of PCNA, replication factor C subunit 4, expressed	NA	NA	GO:0001510|RNA methylation GO:0006260|DNA replication GO:0009220|pyrimidine ribonucleotide biosynthetic process GO:0009793|embryo development ending in seed dormancy GO:0009909|regulation of flower development GO:0016570|histone modification GO:0048449|floral organ formation	GO:0000166|nucleotide binding GO:0003677|DNA binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity	GO:0005634|nucleus GO:0005663|DNA replication factor C complex GO:0005730|nucleolus
pt2_05767	A	A2S	Potri.T152100	Potri.T152100(AS) Potri.002G079700(DS)	POPTR_0002s08040	sp|Q39134|AAP3_ARATH	Amino acid permease 3 OS=Arabidopsis thaliana GN=AAP3 PE=1 SV=2	AT1G77380.1	| Symbols: AAP3, ATAAP3 | amino acid permease 3 | chr1:29075201-29077252 REVERSE LENGTH=476	LOC_Os05g34980.1	protein|amino acid transporter, putative, expressed	IMGA|contig_83375_1.1	Amino acid permease contig_83375 575-3289 E PREDN 20111014	GO:0006612|protein targeting to membrane GO:0006820|anion transport GO:0006862|nucleotide transport GO:0006865|amino acid transport GO:0006888|ER to Golgi vesicle-mediated transport GO:0006944|cellular membrane fusion GO:0010363|regulation of plant-type hypersensitive response GO:0015696|ammonium transport GO:0015802|basic amino acid transport GO:0043069|negative regulation of programmed cell death GO:0043090|amino acid import GO:0043269|regulation of ion transport	GO:0015171|amino acid transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_05768	A	A1S	Potri.T152200	Potri.T152200(AS)	POPTR_0002s08050	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05769	A	A1S	Potri.002G080100	Potri.002G080100(AS)	POPTR_0002s08060	sp|Q99J62|RFC4_MOUSE	Replication factor C subunit 4 OS=Mus musculus GN=Rfc4 PE=1 SV=1	AT1G21690.1	| Symbols: EMB1968, RFC4 | ATPase family associated with various cellular activities (AAA) | chr1:7615675-7618362 FORWARD LENGTH=339	LOC_Os12g07720.1	protein|RFC4 - Putative clamp loader of PCNA, replication factor C subunit 4, expressed	NA	NA	GO:0001510|RNA methylation GO:0006260|DNA replication GO:0009220|pyrimidine ribonucleotide biosynthetic process GO:0009793|embryo development ending in seed dormancy GO:0009909|regulation of flower development GO:0016570|histone modification GO:0048449|floral organ formation	GO:0000166|nucleotide binding GO:0003677|DNA binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity	GO:0005634|nucleus GO:0005663|DNA replication factor C complex GO:0005730|nucleolus
pt2_05770	A	A1S	Potri.002G080200	Potri.002G080200(AS)	POPTR_0002s08070	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05771	A	A1S	Potri.002G080300	Potri.002G080300(AS)	POPTR_0002s08080	sp|Q1PFC5|PP130_ARATH	Pentatricopeptide repeat-containing protein At1g77405 OS=Arabidopsis thaliana GN=At1g77405 PE=2 SV=1	AT1G77405.1	| Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:29087145-29088521 FORWARD LENGTH=458	LOC_Os03g52620.1	protein|expressed protein	IMGA|Medtr1g091670.1	Pentatricopeptide repeat-containing protein chr1 25452365-25454042 H EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005739|mitochondrion
pt2_05772	A	A1S	Potri.002G080400	Potri.002G080400(AS)	POPTR_0002s08090	sp|Q8H4H5|NRAM5_ORYSJ	Metal transporter Nramp5 OS=Oryza sativa subsp. japonica GN=NRAMP5 PE=2 SV=1	AT1G15960.1	| Symbols: NRAMP6, ATNRAMP6 | NRAMP metal ion transporter 6 | chr1:5482202-5485066 REVERSE LENGTH=527	LOC_Os07g15370.1	protein|metal transporter Nramp6, putative, expressed	IMGA|Medtr5g016270.1	Natural resistance-associated macrophage protein chr5 5548672-5544806 E EGN_Mt100125 20111014	GO:0006810|transport GO:0006828|manganese ion transport GO:0006875|cellular metal ion homeostasis GO:0015691|cadmium ion transport GO:0030001|metal ion transport GO:0070574|cadmium ion transmembrane transport	GO:0005215|transporter activity GO:0015086|cadmium ion transmembrane transporter activity GO:0015103|inorganic anion transmembrane transporter activity GO:0046873|metal ion transmembrane transporter activity	GO:0009507|chloroplast GO:0016020|membrane
pt2_05773	A	A1S	Potri.002G080500	Potri.002G080500(AS)	POPTR_0002s08100	sp|Q8H4H5|NRAM5_ORYSJ	Metal transporter Nramp5 OS=Oryza sativa subsp. japonica GN=NRAMP5 PE=2 SV=1	AT1G15960.1	| Symbols: NRAMP6, ATNRAMP6 | NRAMP metal ion transporter 6 | chr1:5482202-5485066 REVERSE LENGTH=527	LOC_Os07g15370.1	protein|metal transporter Nramp6, putative, expressed	IMGA|AC232874_1019.1	Natural resistance-associated macrophage protein AC232874.5 76731-72335 E EGN_Mt100125 20111014	GO:0000041|transition metal ion transport GO:0006810|transport GO:0006828|manganese ion transport GO:0006875|cellular metal ion homeostasis GO:0015691|cadmium ion transport GO:0015692|lead ion transport GO:0030001|metal ion transport GO:0034755|iron ion transmembrane transport GO:0055071|manganese ion homeostasis GO:0070574|cadmium ion transmembrane transport GO:0071421|manganese ion transmembrane transport	GO:0005215|transporter activity GO:0005381|iron ion transmembrane transporter activity GO:0005384|manganese ion transmembrane transporter activity GO:0015086|cadmium ion transmembrane transporter activity GO:0015103|inorganic anion transmembrane transporter activity GO:0046873|metal ion transmembrane transporter activity	GO:0005886|plasma membrane GO:0009507|chloroplast GO:0016020|membrane
pt2_05774	A	A1S	Potri.002G080600	Potri.002G080600(AS)	POPTR_0002s08110	sp|Q9XI07|SWI3C_ARATH	SWI/SNF complex subunit SWI3C OS=Arabidopsis thaliana GN=SWI3C PE=1 SV=1	AT1G21700.1	| Symbols: ATSWI3C, CHB4, SWI3C | SWITCH/sucrose nonfermenting 3C | chr1:7620156-7623978 REVERSE LENGTH=807	LOC_Os11g08080.1	protein|SWIRM domain containing protein, expressed	NA	NA	GO:0006338|chromatin remodeling GO:0007062|sister chromatid cohesion GO:0031048|chromatin silencing by small RNA GO:0040029|regulation of gene expression, epigenetic GO:0045132|meiotic chromosome segregation GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0005515|protein binding	GO:0005634|nucleus GO:0016514|SWI/SNF complex GO:0016585|chromatin remodeling complex
pt2_05775	R	R	NA	NA	POPTR_0002s08115	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05776	A	A1S	Potri.002G080700	Potri.002G080700(AS)	POPTR_0002s08120	sp|Q8GX69|BGA16_ARATH	Beta-galactosidase 16 OS=Arabidopsis thaliana GN=BGAL16 PE=2 SV=2	AT1G77410.1	| Symbols: BGAL16 | beta-galactosidase 16 | chr1:29088771-29093148 REVERSE LENGTH=815	LOC_Os05g35360.1	protein|beta-galactosidase 7 precursor, putative, expressed	IMGA|Medtr5g021190.1	Beta-galactosidase chr5 7885693-7880571 E EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0005990|lactose catabolic process GO:0019513|lactose catabolic process, using glucoside 3-dehydrogenase GO:0019515|lactose catabolic process via UDP-galactose	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0004565|beta-galactosidase activity GO:0030246|carbohydrate binding GO:0043169|cation binding	GO:0005576|extracellular region
pt2_05777	A	A2S	Potri.002G080800	Potri.002G080800(AS) Potri.005G180500(DS)	POPTR_0002s08130	sp|Q9XI05|PSB3A_ARATH	Proteasome subunit beta type-3-A OS=Arabidopsis thaliana GN=PBC1 PE=1 SV=2	AT1G21720.1	| Symbols: PBC1 | proteasome beta subunit C1 | chr1:7626394-7628070 FORWARD LENGTH=204	LOC_Os02g08520.1	protein|peptidase, T1 family, putative, expressed	IMGA|Medtr5g079740.1	Proteasome subunit beta type chr5 33091481-33088556 F EGN_Mt100125 20111014	GO:0006094|gluconeogenesis GO:0006096|glycolysis GO:0006511|ubiquitin-dependent protein catabolic process GO:0006635|fatty acid beta-oxidation GO:0009407|toxin catabolic process GO:0009651|response to salt stress GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0043248|proteasome assembly GO:0046686|response to cadmium ion GO:0051603|proteolysis involved in cellular protein catabolic process GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	GO:0004175|endopeptidase activity GO:0004298|threonine-type endopeptidase activity GO:0008233|peptidase activity	GO:0000502|proteasome complex GO:0005737|cytoplasm GO:0005774|vacuolar membrane GO:0005829|cytosol GO:0005839|proteasome core complex
pt2_05778	A	A1S	Potri.002G080900	Potri.002G080900(AS)	POPTR_0002s08140	sp|Q9LT17|BBR_ARATH	E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana GN=BBR PE=2 SV=1	AT3G47180.1	| Symbols: | RING/U-box superfamily protein | chr3:17372821-17373453 REVERSE LENGTH=210	LOC_Os09g36460.1	protein|zinc RING finger protein, putative, expressed	IMGA|Medtr1g114240.2	RING finger protein chr1 33086901-33092916 F EGN_Mt100125 20111014	NA	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_05779	A	A1S	Potri.002G081000	Potri.002G081000(AS)	POPTR_0002s08150	sp|Q39013|NAC2_ARATH	NAC domain-containing protein 2 OS=Arabidopsis thaliana GN=NAC002 PE=2 SV=2	AT1G01720.1	| Symbols: ATAF1, ANAC002 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein | chr1:268471-269514 FORWARD LENGTH=289	LOC_Os01g66120.1	protein|No apical meristem protein, putative, expressed	IMGA|Medtr5g041940.1	NAC domain protein chr5 18013715-18012368 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0007275|multicellular organismal development GO:0009414|response to water deprivation GO:0009611|response to wounding GO:0009620|response to fungus GO:0009695|jasmonic acid biosynthetic process GO:0009737|response to abscisic acid stimulus GO:0009753|response to jasmonic acid stimulus GO:0009788|negative regulation of abscisic acid mediated signaling pathway GO:0010200|response to chitin GO:0042538|hyperosmotic salinity response	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_05780	B	B1S	Potri.002G081100	Potri.002G081100(BS)	POPTR_0002s08160	NA	NA	AT1G77460.2	| Symbols: | Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein | chr1:29104378-29111580 FORWARD LENGTH=2136	LOC_Os11g08090.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	NA	GO:0005575|cellular_component
pt2_05781	B	B1S	Potri.002G081200	Potri.002G081200(BS)	POPTR_0002s08170	sp|Q9D0F6|RFC5_MOUSE	Replication factor C subunit 5 OS=Mus musculus GN=Rfc5 PE=2 SV=1	AT1G77470.1	| Symbols: RFC3, RFC5 | replication factor C subunit 3 | chr1:29112194-29114323 REVERSE LENGTH=369	LOC_Os02g53500.2	protein|RFC5 - Putative clamp loader of PCNA, replication factor C subunit 5, expressed	IMGA|Medtr5g020810.1	Replication factor C subunit chr5 7712667-7716076 H EGN_Mt100125 20111014	GO:0000398|mRNA splicing, via spliceosome GO:0006260|DNA replication GO:0006312|mitotic recombination GO:0006346|methylation-dependent chromatin silencing GO:0009560|embryo sac egg cell differentiation GO:0009909|regulation of flower development GO:0016246|RNA interference GO:0016570|histone modification GO:0031048|chromatin silencing by small RNA GO:0031348|negative regulation of defense response GO:0048449|floral organ formation GO:0051567|histone H3-K9 methylation	GO:0000166|nucleotide binding GO:0003677|DNA binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity	GO:0005634|nucleus GO:0005663|DNA replication factor C complex
pt2_05782	A	A1S	Potri.002G081300	Potri.002G081300(AS)	POPTR_0002s08180	sp|Q6S001|KIF11_DICDI	Kinesin-related protein 11 OS=Dictyostelium discoideum GN=kif11 PE=3 SV=1	AT1G21730.1	| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:7630365-7636247 FORWARD LENGTH=890	LOC_Os02g53520.1	protein|kinesin motor domain containing protein, putative, expressed	IMGA|Medtr5g021650.1	Kinesin-related protein chr5 8136149-8141619 E EGN_Mt100125 20111014	NA	GO:0003777|microtubule motor activity GO:0005524|ATP binding	GO:0005739|mitochondrion GO:0005886|plasma membrane
pt2_05783	A	A2S	Potri.002G081400	Potri.002G081400(AS) Potri.002G081300(AA)	POPTR_0002s08190	sp|Q0IU52|ASP1_ORYSJ	Aspartic proteinase Asp1 OS=Oryza sativa subsp. japonica GN=ASP1 PE=2 SV=1	AT1G44130.1	| Symbols: | Eukaryotic aspartyl protease family protein | chr1:16787508-16789318 REVERSE LENGTH=405	LOC_Os12g07780.1	protein|eukaryotic aspartyl protease domain containing protein, expressed	IMGA|Medtr5g016260.1	Aspartic proteinase-like protein chr5 5543327-5536900 F EGN_Mt100125 20111014	GO:0006508|proteolysis	GO:0004190|aspartic-type endopeptidase activity	GO:0005576|extracellular region GO:0005794|Golgi apparatus GO:0009505|plant-type cell wall
pt2_05784	A	A1S	Potri.002G081400	Potri.002G081400(AS)	POPTR_0002s08190	sp|Q0IU52|ASP1_ORYSJ	Aspartic proteinase Asp1 OS=Oryza sativa subsp. japonica GN=ASP1 PE=2 SV=1	AT1G44130.1	| Symbols: | Eukaryotic aspartyl protease family protein | chr1:16787508-16789318 REVERSE LENGTH=405	LOC_Os12g07780.1	protein|eukaryotic aspartyl protease domain containing protein, expressed	IMGA|Medtr5g016260.1	Aspartic proteinase-like protein chr5 5543327-5536900 F EGN_Mt100125 20111014	GO:0006508|proteolysis	GO:0004190|aspartic-type endopeptidase activity	GO:0005576|extracellular region GO:0005794|Golgi apparatus GO:0009505|plant-type cell wall
pt2_05785	A	A2S	Potri.002G081400	Potri.002G081400(AS) Potri.002G081300(AA)	POPTR_0002s08190	sp|Q0IU52|ASP1_ORYSJ	Aspartic proteinase Asp1 OS=Oryza sativa subsp. japonica GN=ASP1 PE=2 SV=1	AT1G44130.1	| Symbols: | Eukaryotic aspartyl protease family protein | chr1:16787508-16789318 REVERSE LENGTH=405	LOC_Os12g07780.1	protein|eukaryotic aspartyl protease domain containing protein, expressed	IMGA|Medtr5g016260.1	Aspartic proteinase-like protein chr5 5543327-5536900 F EGN_Mt100125 20111014	GO:0006508|proteolysis	GO:0004190|aspartic-type endopeptidase activity	GO:0005576|extracellular region GO:0005794|Golgi apparatus GO:0009505|plant-type cell wall
pt2_05786	A	A1S	Potri.002G081500	Potri.002G081500(AS)	POPTR_0002s08200	NA	NA	AT3G63420.2	| Symbols: AGG1, ATAGG1, GG1 | Ggamma-subunit 1 | chr3:23417383-23418405 FORWARD LENGTH=98	NA	NA	IMGA|Medtr1g071100.1	hypothetical protein chr1 17441706-17438708 F EGN_Mt100125 20111014	GO:0009817|defense response to fungus, incompatible interaction GO:0009845|seed germination GO:0010541|acropetal auxin transport GO:0048527|lateral root development	GO:0005525|GTP binding	GO:0005737|cytoplasm GO:0005886|plasma membrane
pt2_05787	A	A1S	Potri.002G081600	Potri.002G081600(AS)	POPTR_0002s08210	sp|Q9SCJ9|UBP26_ARATH	Ubiquitin carboxyl-terminal hydrolase 26 OS=Arabidopsis thaliana GN=UBP26 PE=1 SV=3	AT3G49600.1	| Symbols: UBP26, SUP32, ATUBP26 | ubiquitin-specific protease 26 | chr3:18380942-18386662 REVERSE LENGTH=1067	LOC_Os03g09260.1	protein|ubiquitin carboxyl-terminal hydrolase 26, putative, expressed	IMGA|contig_49634_1.1	Ubiquitin carboxyl-terminal hydrolase contig_49634 8517-367 E PREDN 20111014	GO:0006511|ubiquitin-dependent protein catabolic process GO:0007062|sister chromatid cohesion GO:0009640|photomorphogenesis GO:0009790|embryo development GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009880|embryonic pattern specification GO:0009909|regulation of flower development GO:0009933|meristem structural organization GO:0010072|primary shoot apical meristem specification GO:0010162|seed dormancy process GO:0010182|sugar mediated signaling pathway GO:0010228|vegetative to reproductive phase transition of meristem GO:0010431|seed maturation GO:0010564|regulation of cell cycle process GO:0016567|protein ubiquitination GO:0019915|lipid storage GO:0045595|regulation of cell differentiation GO:0048316|seed development GO:0048366|leaf development GO:0048825|cotyledon development GO:0050826|response to freezing	GO:0004221|ubiquitin thiolesterase activity GO:0004843|ubiquitin-specific protease activity	GO:0005634|nucleus GO:0005730|nucleolus
pt2_05788	A	A2S	Potri.002G081700	Potri.002G081700(AS) Potri.005G179400(DS)	POPTR_0002s08220	sp|P59910|DJB13_HUMAN	DnaJ homolog subfamily B member 13 OS=Homo sapiens GN=DNAJB13 PE=2 SV=1	AT1G11040.1	| Symbols: | HSP40/DnaJ peptide-binding protein | chr1:3679225-3680924 REVERSE LENGTH=438	LOC_Os01g65480.1	protein|dnaJ domain containing protein, expressed	IMGA|Medtr5g037880.1	DnaJ homolog subfamily B member chr5 16131554-16134251 F EGN_Mt100125 20111014	GO:0006457|protein folding	GO:0031072|heat shock protein binding GO:0051082|unfolded protein binding	GO:0005634|nucleus
pt2_05789	A	A1S	Potri.002G081800	Potri.002G081800(AS)	POPTR_0002s08230	sp|Q70DU8|AL3H1_ARATH	Aldehyde dehydrogenase family 3 member H1 OS=Arabidopsis thaliana GN=ALDH3H1 PE=2 SV=2	AT1G44170.2	| Symbols: ALDH3H1, ALDH4 | aldehyde dehydrogenase 3H1 | chr1:16796564-16800031 REVERSE LENGTH=484	LOC_Os11g08300.1	protein|aldehyde dehydrogenase, putative, expressed	IMGA|Medtr1g014320.1	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase chr1 3773177-3769070 E EGN_Mt100125 20111014	GO:0006081|cellular aldehyde metabolic process GO:0008152|metabolic process GO:0009269|response to desiccation GO:0009651|response to salt stress GO:0009737|response to abscisic acid stimulus GO:0055114|oxidation-reduction process	GO:0004028|3-chloroallyl aldehyde dehydrogenase activity GO:0004029|aldehyde dehydrogenase (NAD) activity	GO:0005737|cytoplasm GO:0005773|vacuole GO:0005783|endoplasmic reticulum GO:0005794|Golgi apparatus GO:0009506|plasmodesma GO:0009536|plastid GO:0016020|membrane
pt2_05790	A	A1S	Potri.002G081900	Potri.002G081900(AS)	POPTR_0002s08240	sp|Q42593|APXT_ARATH	L-ascorbate peroxidase T, chloroplastic OS=Arabidopsis thaliana GN=APXT PE=2 SV=2	AT1G77490.1	| Symbols: TAPX | thylakoidal ascorbate peroxidase | chr1:29117688-29120046 FORWARD LENGTH=426	LOC_Os12g07820.1	protein|OsAPx6 - Stromal Ascorbate Peroxidase encoding gene 5,8, expressed	IMGA|Medtr5g022510.1	Ascorbate peroxidase chr5 8627186-8623621 H EGN_Mt100125 20111014	GO:0006979|response to oxidative stress GO:0010027|thylakoid membrane organization GO:0015979|photosynthesis GO:0055114|oxidation-reduction process	GO:0004601|peroxidase activity GO:0016688|L-ascorbate peroxidase activity GO:0020037|heme binding	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009570|chloroplast stroma GO:0009579|thylakoid GO:0016020|membrane
pt2_05791	A	A1S	Potri.002G081900	Potri.002G081900(AS)	POPTR_0002s08240	sp|Q42593|APXT_ARATH	L-ascorbate peroxidase T, chloroplastic OS=Arabidopsis thaliana GN=APXT PE=2 SV=2	AT1G77490.1	| Symbols: TAPX | thylakoidal ascorbate peroxidase | chr1:29117688-29120046 FORWARD LENGTH=426	LOC_Os12g07820.1	protein|OsAPx6 - Stromal Ascorbate Peroxidase encoding gene 5,8, expressed	IMGA|Medtr5g022510.1	Ascorbate peroxidase chr5 8627186-8623621 H EGN_Mt100125 20111014	GO:0006979|response to oxidative stress GO:0010027|thylakoid membrane organization GO:0015979|photosynthesis GO:0055114|oxidation-reduction process	GO:0004601|peroxidase activity GO:0016688|L-ascorbate peroxidase activity GO:0020037|heme binding	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009570|chloroplast stroma GO:0009579|thylakoid GO:0016020|membrane
pt2_05792	A	A1S	Potri.002G082000	Potri.002G082000(AS)	POPTR_0002s08250	NA	NA	AT1G21740.1	| Symbols: | Protein of unknown function (DUF630 and DUF632) | chr1:7641580-7645078 FORWARD LENGTH=953	LOC_Os05g35070.1	protein|DUF630/DUF632 domains containing protein, putative, expressed	IMGA|Medtr5g098980.1	BZIP transcription factor bZIP107 chr5 42306877-42302962 E EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation	NA	GO:0005634|nucleus
pt2_05793	B	B1S	Potri.002G082100	Potri.002G082100(BS)	POPTR_0002s08260	sp|Q43116|PDI_RICCO	Protein disulfide-isomerase OS=Ricinus communis PE=2 SV=1	AT1G21750.1	| Symbols: ATPDIL1-1, ATPDI5, PDI5, PDIL1-1 | PDI-like 1-1 | chr1:7645767-7648514 FORWARD LENGTH=501	LOC_Os11g09280.2	protein|OsPDIL1-1 protein disulfide isomerase PDIL1-1, expressed	IMGA|Medtr1g087520.1	Protein disulfide-isomerase chr1 23570259-23566680 E EGN_Mt100125 20111014	GO:0006457|protein folding GO:0006662|glycerol ether metabolic process GO:0009408|response to heat GO:0009627|systemic acquired resistance GO:0009644|response to high light intensity GO:0009651|response to salt stress GO:0009790|embryo development GO:0010043|response to zinc ion GO:0034976|response to endoplasmic reticulum stress GO:0042542|response to hydrogen peroxide GO:0043067|regulation of programmed cell death GO:0045454|cell redox homeostasis GO:0046686|response to cadmium ion GO:0048316|seed development	GO:0003756|protein disulfide isomerase activity GO:0005515|protein binding GO:0009055|electron carrier activity GO:0015035|protein disulfide oxidoreductase activity GO:0016853|isomerase activity	GO:0000326|protein storage vacuole GO:0000327|lytic vacuole within protein storage vacuole GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005783|endoplasmic reticulum GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0009505|plant-type cell wall GO:0009507|chloroplast GO:0009579|thylakoid GO:0016020|membrane
pt2_05794	A	A1S	Potri.002G082200	Potri.002G082200(AS)	POPTR_0002s08270	sp|O80366|ARR9_ARATH	Two-component response regulator ARR9 OS=Arabidopsis thaliana GN=ARR9 PE=1 SV=1	AT3G57040.1	| Symbols: ARR9, ATRR4 | response regulator 9 | chr3:21110059-21111228 FORWARD LENGTH=234	LOC_Os11g04720.2	protein|OsRR10 type-A response regulator, expressed	IMGA|Medtr5g036480.1	Two-component response regulator ARR3 chr5 15492273-15493675 F EGN_Mt100125 20111014	GO:0000160|two-component signal transduction system (phosphorelay) GO:0006355|regulation of transcription, DNA-dependent GO:0007623|circadian rhythm GO:0009735|response to cytokinin stimulus GO:0009736|cytokinin mediated signaling pathway GO:0009740|gibberellic acid mediated signaling pathway GO:0010162|seed dormancy process	GO:0000156|two-component response regulator activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_05795	A	A1S	Potri.002G082300	Potri.002G082300(AS)	POPTR_0002s08280	sp|Q9SFH9|HEM2_ARATH	Delta-aminolevulinic acid dehydratase, chloroplastic OS=Arabidopsis thaliana GN=HEMB PE=1 SV=1	AT1G69740.2	| Symbols: HEMB1 | Aldolase superfamily protein | chr1:26232197-26234713 FORWARD LENGTH=430	LOC_Os06g49110.1	protein|delta-aminolevulinic acid dehydratase, chloroplast precursor, putative, expressed	NA	NA	GO:0006098|pentose-phosphate shunt GO:0006364|rRNA processing GO:0006779|porphyrin-containing compound biosynthetic process GO:0015995|chlorophyll biosynthetic process GO:0033014|tetrapyrrole biosynthetic process	GO:0003824|catalytic activity GO:0004655|porphobilinogen synthase activity GO:0046872|metal ion binding	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_05796	A	A1S	Potri.002G082400	Potri.002G082400(AS)	POPTR_0002s08300	sp|Q8VYX0|ILL6_ARATH	IAA-amino acid hydrolase ILR1-like 6 OS=Arabidopsis thaliana GN=ILL6 PE=2 SV=2	AT1G44350.1	| Symbols: ILL6 | IAA-leucine resistant (ILR)-like gene 6 | chr1:16834749-16838201 REVERSE LENGTH=464	LOC_Os06g47620.1	protein|peptidase, putative, expressed	NA	NA	GO:0006508|proteolysis GO:0008152|metabolic process GO:0009611|response to wounding GO:0009620|response to fungus GO:0009694|jasmonic acid metabolic process GO:0009695|jasmonic acid biosynthetic process GO:0009753|response to jasmonic acid stimulus GO:0009850|auxin metabolic process GO:0010112|regulation of systemic acquired resistance	GO:0008237|metallopeptidase activity GO:0010178|IAA-amino acid conjugate hydrolase activity GO:0016787|hydrolase activity	GO:0005576|extracellular region
pt2_05797	A	A2S	Potri.002G082500	Potri.002G082500(AS) Potri.005G178600(BS)	POPTR_0002s08310	sp|Q9XI00|SKI32_ARATH	F-box protein 7 OS=Arabidopsis thaliana GN=SKIP32 PE=1 SV=1	AT1G21760.1	| Symbols: ATFBP7, FBP7 | F-box protein 7 | chr1:7649324-7651613 FORWARD LENGTH=328	LOC_Os04g35190.1	protein|OsFBX133 - F-box domain containing protein, expressed	NA	NA	GO:0006417|regulation of translation GO:0009408|response to heat GO:0009409|response to cold	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0090406|pollen tube
pt2_05798	A	A1S	Potri.002G082600	Potri.002G082600(AS)	POPTR_0002s08320	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006661|phosphatidylinositol biosynthetic process GO:0008150|biological_process	GO:0004402|histone acetyltransferase activity	GO:0005634|nucleus GO:0005777|peroxisome
pt2_05799	A	A1S	Potri.002G082700	Potri.002G082700(AS)	POPTR_0002s08330	sp|Q43434|VATL_GOSHI	V-type proton ATPase 16 kDa proteolipid subunit OS=Gossypium hirsutum GN=CVA16-2 PE=2 SV=1	AT1G19910.1	| Symbols: AVA-P2, AVA-2PE, ATVHA-C2 | ATPase, F0/V0 complex, subunit C protein | chr1:6913317-6914322 FORWARD LENGTH=165	LOC_Os12g07140.1	protein|expressed protein	IMGA|Medtr5g021690.1	V-type proton ATPase 16 kDa proteolipid subunit c4 chr5 8167333-8164681 F EGN_Mt100125 20111014	GO:0015991|ATP hydrolysis coupled proton transport	GO:0015078|hydrogen ion transmembrane transporter activity GO:0016887|ATPase activity GO:0046961|proton-transporting ATPase activity, rotational mechanism	GO:0000220|vacuolar proton-transporting V-type ATPase, V0 domain GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0009507|chloroplast GO:0033177|proton-transporting two-sector ATPase complex, proton-transporting domain GO:0033179|proton-transporting V-type ATPase, V0 domain
pt2_05800	A	A1S	Potri.002G082800	Potri.002G082800(AS)	POPTR_0002s08340	sp|Q9XHZ8|Y1178_ARATH	BTB/POZ domain-containing protein At1g21780 OS=Arabidopsis thaliana GN=At1g21780 PE=1 SV=1	AT1G21780.2	| Symbols: | BTB/POZ domain-containing protein | chr1:7652476-7653866 FORWARD LENGTH=326	LOC_Os08g01320.2	protein|C3-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with C3 subfamily conserved sequence, expressed	IMGA|Medtr5g096700.1	TD and POZ domain-containing protein chr5 41253561-41255414 F EGN_Mt100125 20111014	GO:0006635|fatty acid beta-oxidation GO:0006891|intra-Golgi vesicle-mediated transport GO:0008150|biological_process GO:0009954|proximal/distal pattern formation GO:0010227|floral organ abscission GO:0016558|protein import into peroxisome matrix GO:0048439|flower morphogenesis	GO:0005515|protein binding	GO:0005737|cytoplasm GO:0031463|Cul3-RING ubiquitin ligase complex
pt2_05801	C	C1S	Potri.002G082900	Potri.002G082900(CS)	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006886|intracellular protein transport GO:0006888|ER to Golgi vesicle-mediated transport GO:0006979|response to oxidative stress GO:0016192|vesicle-mediated transport	GO:0005215|transporter activity GO:0008270|zinc ion binding	GO:0005737|cytoplasm GO:0005829|cytosol GO:0030127|COPII vesicle coat
pt2_05802	A	A1S	Potri.002G083000	Potri.002G083000(AS)	POPTR_0002s08360	sp|Q8LPN7|RNG1L_ARATH	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=2 SV=1	AT1G18760.1	| Symbols: | Zinc finger, C3HC4 type (RING finger) family protein | chr1:6471150-6471824 REVERSE LENGTH=224	LOC_Os12g04590.1	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr5g041310.1	RING finger protein chr5 17741815-17742509 E EGN_Mt100125 20111014	NA	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_05803	A	A1S	Potri.002G083100	Potri.002G083100(AS)	POPTR_0002s08370	NA	NA	AT1G44414.1	| Symbols: | unknown protein; Has 29 Blast hits to 29 proteins in 12 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:16847781-16848086 FORWARD LENGTH=101	LOC_Os05g35970.1	protein|expressed protein	NA	NA	GO:0006457|protein folding GO:0008150|biological_process GO:0009408|response to heat GO:0009644|response to high light intensity GO:0042542|response to hydrogen peroxide	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_05804	A	A2S	Potri.002G083200	Potri.002G083200(AS) Potri.005G178300(DS)	POPTR_0002s08380	sp|Q9MBA1|CAO_ARATH	Chlorophyllide a oxygenase, chloroplastic OS=Arabidopsis thaliana GN=CAO PE=1 SV=1	AT1G44446.1	| Symbols: CH1, ATCAO, CAO | Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain | chr1:16848664-16851152 REVERSE LENGTH=536	LOC_Os10g41780.1	protein|chlorophyllide a oxygenase, chloroplast precursor, putative, expressed	NA	NA	GO:0009073|aromatic amino acid family biosynthetic process GO:0009965|leaf morphogenesis GO:0015995|chlorophyll biosynthetic process GO:0019344|cysteine biosynthetic process GO:0030154|cell differentiation GO:0045893|positive regulation of transcription, DNA-dependent GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0010277|chlorophyllide a oxygenase [overall] activity GO:0016491|oxidoreductase activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0051537|2 iron, 2 sulfur cluster binding	GO:0009507|chloroplast GO:0009706|chloroplast inner membrane GO:0042651|thylakoid membrane
pt2_05805	A	A1S	Potri.002G083200	Potri.002G083200(AS)	POPTR_0002s08380	sp|Q9MBA1|CAO_ARATH	Chlorophyllide a oxygenase, chloroplastic OS=Arabidopsis thaliana GN=CAO PE=1 SV=1	AT1G44446.1	| Symbols: CH1, ATCAO, CAO | Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain | chr1:16848664-16851152 REVERSE LENGTH=536	LOC_Os10g41780.1	protein|chlorophyllide a oxygenase, chloroplast precursor, putative, expressed	NA	NA	GO:0009073|aromatic amino acid family biosynthetic process GO:0009965|leaf morphogenesis GO:0015995|chlorophyll biosynthetic process GO:0019344|cysteine biosynthetic process GO:0030154|cell differentiation GO:0045893|positive regulation of transcription, DNA-dependent GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0010277|chlorophyllide a oxygenase [overall] activity GO:0016491|oxidoreductase activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0051537|2 iron, 2 sulfur cluster binding	GO:0009507|chloroplast GO:0009706|chloroplast inner membrane GO:0042651|thylakoid membrane
pt2_05806	A	A1S	Potri.002G083300	Potri.002G083300(AS)	POPTR_0002s08390	NA	NA	AT1G21790.1	| Symbols: | TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein | chr1:7654357-7655691 FORWARD LENGTH=288	LOC_Os01g64930.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0016021|integral to membrane
pt2_05807	A	A1S	Potri.002G083400	Potri.002G083400(AS)	POPTR_0002s08400	sp|Q8LLE5|FPP_SOLLC	Filament-like plant protein (Fragment) OS=Solanum lycopersicum GN=FPP PE=1 SV=1	AT3G05270.2	| Symbols: | Plant protein of unknown function (DUF869) | chr3:1500803-1502926 REVERSE LENGTH=615	LOC_Os11g06910.2	protein|myosin heavy chain-related, putative, expressed	IMGA|Medtr5g021810.1	Filament-like plant protein chr5 8238844-8242977 E EGN_Mt100125 20111014	NA	NA	GO:0005737|cytoplasm
pt2_05808	A	A1S	Potri.002G083400	Potri.002G083400(AS)	POPTR_0002s08400	sp|Q8LLE5|FPP_SOLLC	Filament-like plant protein (Fragment) OS=Solanum lycopersicum GN=FPP PE=1 SV=1	AT3G05270.2	| Symbols: | Plant protein of unknown function (DUF869) | chr3:1500803-1502926 REVERSE LENGTH=615	LOC_Os11g06910.2	protein|myosin heavy chain-related, putative, expressed	IMGA|Medtr5g021810.1	Filament-like plant protein chr5 8238844-8242977 E EGN_Mt100125 20111014	NA	NA	GO:0005737|cytoplasm
pt2_05809	A	A1S	Potri.002G083500	Potri.002G083500(AS)	POPTR_0002s08410	sp|Q02060|PSBS_SPIOL	Photosystem II 22 kDa protein, chloroplastic OS=Spinacia oleracea GN=PSBS PE=1 SV=1	AT1G44575.1	| Symbols: NPQ4, PSBS | Chlorophyll A-B binding family protein | chr1:16871768-16873194 FORWARD LENGTH=265	LOC_Os01g64960.1	protein|chlorophyll A-B binding protein, putative, expressed	NA	NA	GO:0000023|maltose metabolic process GO:0006364|rRNA processing GO:0009657|plastid organization GO:0010027|thylakoid membrane organization GO:0010103|stomatal complex morphogenesis GO:0010196|nonphotochemical quenching GO:0010207|photosystem II assembly GO:0019252|starch biosynthetic process GO:0019344|cysteine biosynthetic process GO:0043085|positive regulation of catalytic activity GO:0080167|response to karrikin	GO:0016168|chlorophyll binding GO:0051738|xanthophyll binding	GO:0009507|chloroplast GO:0009517|PSII associated light-harvesting complex II GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009579|thylakoid GO:0016020|membrane
pt2_05810	A	A2S	Potri.002G083600	Potri.002G083600(AS) Potri.005G178000(DS)	POPTR_0002s08420	sp|Q9STN5|Y4833_ARATH	Uncharacterized protein At4g08330, chloroplastic OS=Arabidopsis thaliana GN=At4g08330 PE=1 SV=1	AT4G08330.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G17705.1); Has 98 Blast hits to 98 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:5255384-5256525 REVERSE LENGTH=164	LOC_Os05g39060.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_05811	A	A2S	Potri.002G083800	Potri.002G083800(AS) Potri.002G083700(BS)	POPTR_0002s08430	sp|Q7Y1X1|EST_HEVBR	Esterase OS=Hevea brasiliensis PE=1 SV=1	AT3G26430.1	| Symbols: | GDSL-like Lipase/Acylhydrolase superfamily protein | chr3:9674419-9675889 FORWARD LENGTH=380	LOC_Os07g39750.1	protein|GDSL-like lipase/acylhydrolase, putative, expressed	IMGA|Medtr1g030220.1	Early nodulin chr1 8769562-8773292 E EGN_Mt100125 20111014	GO:0006629|lipid metabolic process	GO:0004091|carboxylesterase activity GO:0016788|hydrolase activity, acting on ester bonds	GO:0005576|extracellular region
pt2_05812	A	A1S	Potri.002G083900	Potri.002G083900(AS)	POPTR_0002s08440	NA	NA	AT1G21830.1	| Symbols: | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF740 (InterPro:IPR008004); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G44608.1); Has 49 Blast hits to 49 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:7661429-7662521 REVERSE LENGTH=206	LOC_Os04g59420.2	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05813	A	A1S	Potri.002G084100	Potri.002G084100(AS)	POPTR_0002s08450	sp|Q9CAP8|LACS9_ARATH	Long chain acyl-CoA synthetase 9, chloroplastic OS=Arabidopsis thaliana GN=LACS9 PE=2 SV=1	AT1G77590.1	| Symbols: LACS9 | long chain acyl-CoA synthetase 9 | chr1:29148501-29151776 REVERSE LENGTH=691	LOC_Os12g07110.2	protein|acyl-CoA synthetase protein, putative, expressed	IMGA|Medtr1g030290.1	Long-chain-fatty-acid-CoA ligase chr1 8810093-8803193 E EGN_Mt100125 20111014	GO:0001676|long-chain fatty acid metabolic process GO:0006631|fatty acid metabolic process GO:0006633|fatty acid biosynthetic process	GO:0003824|catalytic activity GO:0004467|long-chain fatty acid-CoA ligase activity	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009536|plastid GO:0009941|chloroplast envelope GO:0016020|membrane
pt2_05814	A	A1S	Potri.002G084200	Potri.002G084200(AS)	POPTR_0002s08460	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05815	A	A1S	Potri.002G084300	Potri.002G084300(AS)	POPTR_0002s08470	sp|A4L9P7|PDS5A_RAT	Sister chromatid cohesion protein PDS5 homolog A OS=Rattus norvegicus GN=Pds5a PE=2 SV=1	AT1G77600.2	| Symbols: | ARM repeat superfamily protein | chr1:29152890-29162156 REVERSE LENGTH=1410	LOC_Os01g64900.1	protein|HEAT, putative, expressed	NA	NA	GO:0007067|mitosis GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05816	A	A1S	Potri.002G084400	Potri.002G084400(AS)	POPTR_0002s08480	NA	NA	AT1G48200.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30 Blast hits to 30 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:17797070-17797852 REVERSE LENGTH=118	LOC_Os06g05670.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_05817	A	A1S	Potri.002G084500	Potri.002G084500(AS)	POPTR_0002s08490	sp|Q9C521|UGAL1_ARATH	UDP-galactose transporter 1 OS=Arabidopsis thaliana GN=UDP-GALT1 PE=2 SV=1	AT1G77610.1	| Symbols: | EamA-like transporter family protein | chr1:29165489-29167486 FORWARD LENGTH=336	LOC_Os08g01410.1	protein|phosphate/phosphoenolpyruvate translocator-related protein, putative, expressed	IMGA|Medtr1g030320.1	Solute carrier family 35 member E3 chr1 8827083-8831902 E EGN_Mt100125 20111014	GO:0006863|purine nucleobase transport GO:0015783|GDP-fucose transport GO:0015786|UDP-glucose transport GO:0072334|UDP-galactose transmembrane transport	GO:0005457|GDP-fucose transmembrane transporter activity GO:0005459|UDP-galactose transmembrane transporter activity GO:0005460|UDP-glucose transmembrane transporter activity GO:0008514|organic anion transmembrane transporter activity	GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0016020|membrane
pt2_05818	A	A1S	Potri.002G084600	Potri.002G084600(AS)	POPTR_0002s08500	NA	NA	AT1G44760.1	| Symbols: | Adenine nucleotide alpha hydrolases-like superfamily protein | chr1:16896894-16898427 REVERSE LENGTH=213	LOC_Os01g65440.1	protein|universal stress protein domain containing protein, putative, expressed	IMGA|Medtr5g047050.1	hypothetical protein chr5 20213334-20214925 E EGN_Mt100125 20111014	GO:0002238|response to molecule of fungal origin GO:0006950|response to stress	GO:0003674|molecular_function	NA
pt2_05819	A	A1S	Potri.002G084700	Potri.002G084700(AS)	POPTR_0002s08510	sp|Q4QY64|ATAD5_MOUSE	ATPase family AAA domain-containing protein 5 OS=Mus musculus GN=Atad5 PE=1 SV=1	AT1G77620.1	| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:29167934-29172867 REVERSE LENGTH=1151	LOC_Os03g15580.1	protein|AT hook motif family protein, expressed	IMGA|Medtr1g030410.1	Replication factor C large subunit chr1 8864841-8856321 E EGN_Mt100125 20111014	GO:0006281|DNA repair	GO:0000166|nucleotide binding GO:0017111|nucleoside-triphosphatase activity	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_05820	R	R	NA	NA	POPTR_0002s08520	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05821	A	A1S	Potri.002G084800	Potri.002G084800(AS)	POPTR_0002s08530	sp|Q93ZH0|LYM1_ARATH	LysM domain-containing GPI-anchored protein 1 OS=Arabidopsis thaliana GN=At1g21880 PE=1 SV=1	AT1G21880.2	| Symbols: LYM1 | lysm domain GPI-anchored protein 1 precursor | chr1:7680689-7682526 FORWARD LENGTH=416	LOC_Os02g53000.1	protein|lysM domain-containing GPI-anchored protein precursor, putative, expressed	NA	NA	GO:0006955|immune response GO:0009909|regulation of flower development GO:0016570|histone modification GO:0016998|cell wall macromolecule catabolic process GO:0048449|floral organ formation	GO:0042834|peptidoglycan binding	GO:0005886|plasma membrane GO:0031225|anchored to membrane GO:0046658|anchored to plasma membrane
pt2_05822	A	A1S	Potri.002G084900	Potri.002G084900(AS)	POPTR_0002s08540	NA	NA	AT1G44770.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49710.3); Has 81 Blast hits to 81 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:16907834-16909409 REVERSE LENGTH=271	LOC_Os03g49490.1	protein|expressed protein	NA	NA	GO:0007033|vacuole organization GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_05823	A	A1S	Potri.002G085000	Potri.002G085000(AS)	POPTR_0002s08550	NA	NA	AT4G08310.1	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone chaperone domain CHZ (InterPro:IPR019098); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G44780.2); Has 53711 Blast hits to 33687 proteins in 1618 species: Archae - 142; Bacteria - 4400; Metazoa - 24303; Fungi - 6688; Plants - 2484; Viruses - 449; Other Eukaryotes - 15245 (source: NCBI BLink). | chr4:5249047-5252139 REVERSE LENGTH=504	LOC_Os11g34190.1	protein|expressed protein	NA	NA	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0008150|biological_process GO:0009086|methionine biosynthetic process GO:0009616|virus induced gene silencing GO:0010050|vegetative phase change	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05824	A	A1S	Potri.002G085100	Potri.002G085100(AS)	POPTR_0002s08560	sp|Q6J163|5NG4_PINTA	Auxin-induced protein 5NG4 OS=Pinus taeda PE=2 SV=1	AT1G21890.1	| Symbols: | nodulin MtN21 /EamA-like transporter family protein | chr1:7682808-7685581 REVERSE LENGTH=389	LOC_Os10g14920.2	protein|integral membrane protein DUF6 containing protein, expressed	IMGA|Medtr5g021160.1	Auxin-induced protein 5NG4 chr5 7866846-7869645 E EGN_Mt100125 20111014	NA	NA	GO:0016020|membrane
pt2_05825	A	A1S	Potri.002G085200	Potri.002G085200(AS)	POPTR_0002s08570	NA	NA	AT4G08280.1	| Symbols: | Thioredoxin superfamily protein | chr4:5230345-5231196 FORWARD LENGTH=126	LOC_Os02g52900.2	protein|glutaredoxin 2, putative, expressed	NA	NA	GO:0008150|biological_process GO:0010207|photosystem II assembly	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_05826	B	B1S	Potri.002G085200	Potri.002G085200(BS)	POPTR_0002s08570	NA	NA	AT4G08280.1	| Symbols: | Thioredoxin superfamily protein | chr4:5230345-5231196 FORWARD LENGTH=126	LOC_Os02g52900.2	protein|glutaredoxin 2, putative, expressed	NA	NA	GO:0008150|biological_process GO:0010207|photosystem II assembly	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_05827	A	A1S	Potri.002G085200	Potri.002G085200(AS)	POPTR_0002s08570	NA	NA	AT4G08280.1	| Symbols: | Thioredoxin superfamily protein | chr4:5230345-5231196 FORWARD LENGTH=126	LOC_Os02g52900.2	protein|glutaredoxin 2, putative, expressed	NA	NA	GO:0008150|biological_process GO:0010207|photosystem II assembly	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_05828	A	A1S	Potri.002G085300	Potri.002G085300(AS)	POPTR_0002s08580	sp|Q5E971|TMEDA_BOVIN	Transmembrane emp24 domain-containing protein 10 OS=Bos taurus GN=TMED10 PE=2 SV=1	AT1G09580.1	| Symbols: | emp24/gp25L/p24 family/GOLD family protein | chr1:3104657-3106092 FORWARD LENGTH=217	LOC_Os06g10760.1	protein|emp24/gp25L/p24 family protein, putative, expressed	IMGA|Medtr5g058140.1	Transmembrane emp24 domain-containing protein chr5 23359695-23355297 F EGN_Mt100125 20111014	GO:0006810|transport GO:0006886|intracellular protein transport	GO:0008320|protein transmembrane transporter activity	GO:0016020|membrane GO:0016021|integral to membrane
pt2_05829	A	A2S	Potri.002G085400	Potri.002G085400(AS) Potri.002G085500(DS)	POPTR_0002s08590	sp|Q99JW2|ACY1_MOUSE	Aminoacylase-1 OS=Mus musculus GN=Acy1 PE=1 SV=1	AT1G44820.1	| Symbols: | Peptidase M20/M25/M40 family protein | chr1:16926351-16928354 FORWARD LENGTH=438	LOC_Os06g10770.1	protein|peptidase, putative, expressed	IMGA|Medtr5g058430.1	Aminoacylase-1 chr5 23481525-23489418 F EGN_Mt100125 20111014	GO:0006520|cellular amino acid metabolic process GO:0008152|metabolic process	GO:0004046|aminoacylase activity GO:0016787|hydrolase activity	GO:0005737|cytoplasm GO:0005783|endoplasmic reticulum GO:0009507|chloroplast
pt2_05830	A	A1S	Potri.002G085500	Potri.002G085500(AS)	POPTR_0002s08600	sp|Q99JW2|ACY1_MOUSE	Aminoacylase-1 OS=Mus musculus GN=Acy1 PE=1 SV=1	AT1G44820.1	| Symbols: | Peptidase M20/M25/M40 family protein | chr1:16926351-16928354 FORWARD LENGTH=438	LOC_Os06g10770.1	protein|peptidase, putative, expressed	IMGA|Medtr5g058430.1	Aminoacylase-1 chr5 23481525-23489418 F EGN_Mt100125 20111014	GO:0006520|cellular amino acid metabolic process GO:0008152|metabolic process	GO:0004046|aminoacylase activity GO:0016787|hydrolase activity	GO:0005737|cytoplasm GO:0005783|endoplasmic reticulum GO:0009507|chloroplast
pt2_05831	A	A1S	Potri.002G085600	Potri.002G085600(AS)	POPTR_0002s08610	sp|Q9CAP4|ERF13_ARATH	Ethylene-responsive transcription factor ERF013 OS=Arabidopsis thaliana GN=ERF013 PE=2 SV=1	AT1G77640.1	| Symbols: | Integrase-type DNA-binding superfamily protein | chr1:29178796-29179530 FORWARD LENGTH=244	LOC_Os06g10780.1	protein|AP2 domain containing protein, expressed	IMGA|Medtr5g058470.1	AP2 domain-containing transcription factor chr5 23507226-23508237 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009741|response to brassinosteroid stimulus GO:0009751|response to salicylic acid stimulus GO:0009753|response to jasmonic acid stimulus GO:0034605|cellular response to heat GO:0045893|positive regulation of transcription, DNA-dependent GO:0071497|cellular response to freezing	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_05832	G	G1	NA	NA	POPTR_0002s08620	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05833	A	A1S	Potri.002G085800	Potri.002G085800(AS)	POPTR_0002s08630	sp|P0CH30|RING1_GOSHI	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=2 SV=1	AT1G60360.1	| Symbols: | RING/U-box superfamily protein | chr1:22242748-22243731 REVERSE LENGTH=327	LOC_Os03g22830.2	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr5g088720.3	Thioredoxin-related protein chr5 37468686-37475289 F EGN_Mt100125 20111014	NA	GO:0008270|zinc ion binding	NA
pt2_05834	A	A1S	Potri.002G085900	Potri.002G085900(AS)	POPTR_0002s08640	sp|Q56YP2|PI5K1_ARATH	Phosphatidylinositol 4-phosphate 5-kinase 1 OS=Arabidopsis thaliana GN=PIP5K1 PE=1 SV=1	AT1G21920.1	| Symbols: | Histone H3 K4-specific methyltransferase SET7/9 family protein | chr1:7704454-7705866 REVERSE LENGTH=417	LOC_Os09g28060.1	protein|MORN repeat domain containing protein, expressed	IMGA|Medtr5g058920.1	Phosphatidylinositol-4-phosphate 5-kinase chr5 23659553-23662290 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_05835	A	A3S	Potri.002G086000	Potri.002G086000(AS) Potri.005G175400(DS) Potri.005G175600(DS)	POPTR_0002s08650	sp|O53870|DAPC_MYCTU	Probable N-succinyldiaminopimelate aminotransferase DapC OS=Mycobacterium tuberculosis GN=dapC PE=1 SV=1	AT1G77670.1	| Symbols: | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein | chr1:29189043-29190901 REVERSE LENGTH=440	LOC_Os09g28050.1	protein|asparate aminotransferase, putative, expressed	IMGA|contig_58137_1.1	Aminotransferase family protein contig_58137 2994-936 E PREDN 20111014	GO:0006530|asparagine catabolic process GO:0009058|biosynthetic process GO:0019465|aspartate transamidation GO:0019554|glutamate catabolic process to oxaloacetate GO:0042218|1-aminocyclopropane-1-carboxylate biosynthetic process	GO:0003824|catalytic activity GO:0008483|transaminase activity GO:0016740|transferase activity GO:0016847|1-aminocyclopropane-1-carboxylate synthase activity GO:0030170|pyridoxal phosphate binding	GO:0005737|cytoplasm GO:0009507|chloroplast
pt2_05836	A	A1S	Potri.002G086100	Potri.002G086100(AS)	POPTR_0002s08660	sp|Q5NE24|NSP2_MEDTR	Nodulation-signaling pathway 2 protein OS=Medicago truncatula GN=NSP2 PE=1 SV=1	AT4G08250.1	| Symbols: | GRAS family transcription factor | chr4:5196787-5198238 FORWARD LENGTH=483	LOC_Os03g15680.1	protein|nodulation-signaling pathway 2 protein, putative, expressed	IMGA|Medtr5g058860.1	Nodulation signaling pathway chr5 23641413-23642933 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05837	A	A1S	Potri.002G086200	Potri.002G086200(AS)	POPTR_0002s08670	NA	NA	AT4G08240.1	| Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:5194713-5195756 FORWARD LENGTH=136	LOC_Os02g35890.1	protein|expressed protein	IMGA|Medtr5g059030.1	hypothetical protein chr5 23717424-23716277 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005829|cytosol
pt2_05838	A	A1S	Potri.002G086300	Potri.002G086300(AS)	POPTR_0002s08680	NA	NA	AT1G21930.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G42150.3); Has 43 Blast hits to 43 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:7713466-7714298 FORWARD LENGTH=98	LOC_Os12g29670.1	protein|expressed protein	IMGA|Medtr5g059050.1	hypothetical protein chr5 23722059-23723253 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_05839	A	A1S	Potri.002G086400	Potri.002G086400(AS)	POPTR_0002s08690	sp|Q8IYB7|DI3L2_HUMAN	DIS3-like exonuclease 2 OS=Homo sapiens GN=DIS3L2 PE=1 SV=4	AT1G77680.1	| Symbols: | Ribonuclease II/R family protein | chr1:29192188-29195963 REVERSE LENGTH=1055	LOC_Os02g51780.1	protein|ribonuclease protein, putative, expressed	IMGA|Medtr5g059080.1	DIS3-like exonuclease chr5 23736917-23730765 E EGN_Mt100125 20111014	NA	GO:0003723|RNA binding GO:0004540|ribonuclease activity	GO:0005737|cytoplasm
pt2_05840	A	A1S	Potri.002G086500	Potri.002G086500(AS)	POPTR_0002s08700	sp|O65238|Y5537_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370 OS=Arabidopsis thaliana GN=At5g35370 PE=2 SV=2	AT5G35370.1	| Symbols: | S-locus lectin protein kinase family protein | chr5:13588564-13591182 REVERSE LENGTH=872	LOC_Os09g28180.1	protein|D-mannose binding lectin family protein, expressed	IMGA|Medtr1g012550.1	S-receptor kinase -like protein chr1 2972904-2970427 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_05841	A	A1S	Potri.002G086600	Potri.002G086600(AS)	POPTR_0002s08710	NA	NA	AT4G08230.1	| Symbols: | glycine-rich protein | chr4:5188047-5189574 REVERSE LENGTH=113	LOC_Os03g15720.1	protein|expressed protein	IMGA|Medtr5g059100.1	hypothetical protein chr5 23745213-23749879 F EGN_Mt100125 20111014	GO:0006457|protein folding GO:0006984|ER-nucleus signaling pathway GO:0008150|biological_process GO:0009408|response to heat GO:0009644|response to high light intensity GO:0031348|negative regulation of defense response GO:0034976|response to endoplasmic reticulum stress GO:0042542|response to hydrogen peroxide GO:0071216|cellular response to biotic stimulus	GO:0003674|molecular_function	NA
pt2_05842	A	A1S	Potri.002G086700	Potri.002G086700(AS)	POPTR_0002s08720	sp|Q07512|FLS_PETHY	Flavonol synthase/flavanone 3-hydroxylase OS=Petunia hybrida GN=FL PE=2 SV=1	AT5G08640.2	| Symbols: FLS1 | flavonol synthase 1 | chr5:2804009-2805175 FORWARD LENGTH=336	LOC_Os02g52840.1	protein|flavonol synthase/flavanone 3-hydroxylase, putative, expressed	IMGA|Medtr5g059130.1	Flavonol synthase/flavanone 3-hydroxylase chr5 23754987-23757902 E EGN_Mt100125 20111014	GO:0009411|response to UV GO:0009718|anthocyanin-containing compound biosynthetic process GO:0009733|response to auxin stimulus GO:0009744|response to sucrose stimulus GO:0009813|flavonoid biosynthetic process GO:0010224|response to UV-B GO:0055114|oxidation-reduction process GO:0080167|response to karrikin	GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors GO:0045431|flavonol synthase activity	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_05843	A	A1S	Potri.002G086800	Potri.002G086800(AS)	POPTR_0002s08730	NA	NA	AT2G41705.2	| Symbols: | camphor resistance CrcB family protein | chr2:17398083-17399910 FORWARD LENGTH=461	LOC_Os10g41749.2	protein|crcB-like protein, expressed	NA	NA	GO:0046482|para-aminobenzoic acid metabolic process	NA	GO:0005886|plasma membrane GO:0016020|membrane
pt2_05844	A	A2S	Potri.002G086900	Potri.002G086900(AS) Potri.005G174300(DS)	POPTR_0002s08740	sp|P27484|GRP2_NICSY	Glycine-rich protein 2 OS=Nicotiana sylvestris GN=GRP-2 PE=2 SV=1	AT2G17870.1	| Symbols: ATCSP3, CSP3 | cold shock domain protein 3 | chr2:7764276-7765181 REVERSE LENGTH=301	LOC_Os08g03520.1	protein|retrotransposon protein, putative, Ty1-copia subclass, expressed	IMGA|contig_76403_1.1	Cold shock protein-1 contig_76403 1993-2942 E PREDN 20111014	GO:0009165|nucleotide biosynthetic process GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009631|cold acclimation GO:0009651|response to salt stress GO:0010501|RNA secondary structure unwinding GO:0032508|DNA duplex unwinding	GO:0003676|nucleic acid binding GO:0003677|DNA binding GO:0003690|double-stranded DNA binding GO:0003697|single-stranded DNA binding GO:0003723|RNA binding GO:0008270|zinc ion binding	NA
pt2_05845	A	A1S	Potri.002G087000	Potri.002G087000(AS)	POPTR_0002s08750	sp|Q9FEL6|LAX3_MEDTR	Auxin transporter-like protein 3 OS=Medicago truncatula GN=LAX3 PE=2 SV=1	AT1G77690.1	| Symbols: LAX3 | like AUX1 3 | chr1:29201232-29203317 REVERSE LENGTH=470	LOC_Os03g14080.1	protein|transmembrane amino acid transporter protein, putative, expressed	IMGA|Medtr5g082220.1	Auxin influx protein chr5 34309297-34314908 E EGN_Mt100125 20111014	GO:0000271|polysaccharide biosynthetic process GO:0006084|acetyl-CoA metabolic process GO:0006865|amino acid transport GO:0009733|response to auxin stimulus GO:0009825|multidimensional cell growth GO:0009926|auxin polar transport GO:0009932|cell tip growth GO:0010311|lateral root formation GO:0010583|response to cyclopentenone GO:0010817|regulation of hormone levels GO:0016126|sterol biosynthetic process GO:0016132|brassinosteroid biosynthetic process GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0048767|root hair elongation GO:0048829|root cap development GO:0071555|cell wall organization	GO:0005215|transporter activity GO:0010328|auxin influx transmembrane transporter activity GO:0015171|amino acid transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_05846	A	A1S	Potri.002G087100	Potri.002G087100(AS)	POPTR_0002s08760	sp|P50699|TLPH_ARATH	Thaumatin-like protein OS=Arabidopsis thaliana GN=At1g18250 PE=2 SV=2	AT1G77700.1	| Symbols: | Pathogenesis-related thaumatin superfamily protein | chr1:29204747-29206217 FORWARD LENGTH=356	LOC_Os04g59370.1	protein|thaumatin, putative, expressed	IMGA|Medtr5g059200.1	Pathogenesis-related protein chr5 23780576-23781889 E EGN_Mt100125 20111014	GO:0051707|response to other organism	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005576|extracellular region
pt2_05847	A	A1S	Potri.002G087200	Potri.002G087200(AS)	POPTR_0002s08770	sp|Q9CA23|UFM1_ARATH	Ubiquitin-fold modifier 1 OS=Arabidopsis thaliana GN=At1g77710 PE=2 SV=1	AT1G77710.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Ubiquitin-like, Ufm1 (InterPro:IPR005375); Has 244 Blast hits to 244 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 149; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). | chr1:29206750-29207895 FORWARD LENGTH=93	LOC_Os01g73140.1	protein|ubiquitin-fold modifier 1 precursor, putative, expressed	IMGA|Medtr5g059210.1	Ubiquitin-fold modifier chr5 23784667-23787330 F EGN_Mt100125 20111014	GO:0006661|phosphatidylinositol biosynthetic process GO:0008150|biological_process	NA	NA
pt2_05848	A	A2S	Potri.002G087200	Potri.002G087200(AS) Potri.005G173800(DS)	POPTR_0002s08780	sp|Q9CA23|UFM1_ARATH	Ubiquitin-fold modifier 1 OS=Arabidopsis thaliana GN=At1g77710 PE=2 SV=1	AT1G77710.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Ubiquitin-like, Ufm1 (InterPro:IPR005375); Has 244 Blast hits to 244 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 149; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). | chr1:29206750-29207895 FORWARD LENGTH=93	LOC_Os01g73140.1	protein|ubiquitin-fold modifier 1 precursor, putative, expressed	IMGA|Medtr5g059210.1	Ubiquitin-fold modifier chr5 23784667-23787330 F EGN_Mt100125 20111014	GO:0006661|phosphatidylinositol biosynthetic process GO:0008150|biological_process	NA	NA
pt2_05849	A	A1S	Potri.002G087300	Potri.002G087300(AS)	POPTR_0002s08790	sp|Q8W486|Y1491_ARATH	DUF246 domain-containing protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=1 SV=1	AT1G38131.1	| Symbols: | O-fucosyltransferase family protein | chr1:14293392-14296020 REVERSE LENGTH=589	LOC_Os12g07540.1	protein|growth regulator related protein, putative, expressed	IMGA|Medtr5g059260.1	Growth regulator-related protein chr5 23801374-23808565 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0016757|transferase activity, transferring glycosyl groups	GO:0005794|Golgi apparatus
pt2_05850	A	A1S	Potri.002G087400	Potri.002G087400(AS)	POPTR_0002s08800	sp|Q9SUF9|PP305_ARATH	Pentatricopeptide repeat-containing protein At4g08210 OS=Arabidopsis thaliana GN=PCMP-E100 PE=2 SV=1	AT4G08210.1	| Symbols: | Pentatricopeptide repeat (PPR-like) superfamily protein | chr4:5183813-5185873 REVERSE LENGTH=686	LOC_Os08g25280.1	protein|pentatricopeptide, putative, expressed	IMGA|Medtr1g007600.1	Pentatricopeptide repeat-containing protein chr1 1022538-1020055 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_05851	A	A2S	Potri.002G087500	Potri.002G087500(AS) Potri.005G173400(DS)	POPTR_0002s08810	NA	NA	AT1G75710.1	| Symbols: | C2H2-like zinc finger protein | chr1:28428806-28431128 FORWARD LENGTH=462	LOC_Os04g59380.1	protein|ZOS4-14 - C2H2 zinc finger protein, expressed	IMGA|AC229724_1046.1	C2H2 zinc finger protein AC229724.12 177025-179406 F EGN_Mt100125 20111014	NA	GO:0003676|nucleic acid binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_05852	A	A1S	Potri.002G087600	Potri.002G087600(AS)	POPTR_0002s08820	sp|O94235|MPH1_SCHPO	Serine/threonine-protein kinase mph1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mph1 PE=2 SV=1	AT1G77720.1	| Symbols: PPK1 | putative protein kinase 1 | chr1:29210730-29213877 FORWARD LENGTH=777	LOC_Os03g49750.1	protein|protein kinase family protein, putative, expressed	IMGA|Medtr5g059280.1	Serine/threonine protein kinase chr5 23813140-23818960 E EGN_Mt100125 20111014	GO:0000226|microtubule cytoskeleton organization GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0006346|methylation-dependent chromatin silencing GO:0006468|protein phosphorylation GO:0007267|cell-cell signaling GO:0009616|virus induced gene silencing GO:0009909|regulation of flower development GO:0010267|production of ta-siRNAs involved in RNA interference GO:0016570|histone modification GO:0031047|gene silencing by RNA GO:0031048|chromatin silencing by small RNA GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0046777|protein autophosphorylation GO:0048449|floral organ formation GO:0051567|histone H3-K9 methylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus
pt2_05853	A	A1S	Potri.002G087700	Potri.002G087700(AS)	POPTR_0002s08830	sp|P50747|BPL1_HUMAN	Biotin--protein ligase OS=Homo sapiens GN=HLCS PE=1 SV=1	AT2G25710.2	| Symbols: HCS1 | holocarboxylase synthase 1 | chr2:10952719-10955061 FORWARD LENGTH=367	LOC_Os02g07040.2	protein|biotin--protein ligase, putative, expressed	NA	NA	GO:0006464|cellular protein modification process GO:0015979|photosynthesis GO:0042966|biotin carboxyl carrier protein biosynthetic process GO:0045333|cellular respiration	GO:0003824|catalytic activity GO:0004077|biotin-[acetyl-CoA-carboxylase] ligase activity GO:0004078|biotin-[methylcrotonoyl-CoA-carboxylase] ligase activity	GO:0005576|extracellular region GO:0005829|cytosol GO:0009507|chloroplast GO:0009536|plastid
pt2_05854	A	A1A	Potri.002G087800	Potri.002G087800(AA)	POPTR_0002s08840	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05855	A	A1S	Potri.002G087900	Potri.002G087900(AS)	POPTR_0002s08850	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05856	A	A2S	Potri.002G088000	Potri.002G088000(AS) Potri.005G172900(DS)	POPTR_0002s08870	sp|Q8L751|ORP1C_ARATH	Oxysterol-binding protein-related protein 1C OS=Arabidopsis thaliana GN=ORP1C PE=2 SV=1	AT4G08180.2	| Symbols: ORP1C | OSBP(oxysterol binding protein)-related protein 1C | chr4:5169727-5173360 FORWARD LENGTH=813	LOC_Os03g49770.1	protein|oxysterol-binding protein, putative, expressed	NA	NA	GO:0000165|MAPK cascade GO:0006612|protein targeting to membrane GO:0007165|signal transduction GO:0008202|steroid metabolic process GO:0009409|response to cold GO:0009605|response to external stimulus GO:0009723|response to ethylene stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010200|response to chitin GO:0010363|regulation of plant-type hypersensitive response GO:0030968|endoplasmic reticulum unfolded protein response GO:0031348|negative regulation of defense response GO:0035556|intracellular signal transduction GO:0043069|negative regulation of programmed cell death GO:0050832|defense response to fungus	GO:0005543|phospholipid binding GO:0008142|oxysterol binding GO:0035091|phosphatidylinositol binding	GO:0005634|nucleus
pt2_05857	A	A2S	Potri.002G088100	Potri.002G088100(AS) Potri.005G172800(DS)	POPTR_0002s08880	sp|Q56YP2|PI5K1_ARATH	Phosphatidylinositol 4-phosphate 5-kinase 1 OS=Arabidopsis thaliana GN=PIP5K1 PE=1 SV=1	AT1G21980.1	| Symbols: ATPIP5K1, ATPIPK1, PIP5K1 | phosphatidylinositol-4-phosphate 5-kinase 1 | chr1:7735053-7738309 FORWARD LENGTH=752	LOC_Os03g49800.1	protein|phosphatidylinositol-4-phosphate 5-kinase, putative, expressed	IMGA|contig_81106_1.1	Phosphatidylinositol-4-phosphate 5-kinase contig_81106 300-836 H PREDN 20111014	GO:0046488|phosphatidylinositol metabolic process	GO:0003785|actin monomer binding GO:0005524|ATP binding GO:0016307|phosphatidylinositol phosphate kinase activity GO:0016308|1-phosphatidylinositol-4-phosphate 5-kinase activity GO:0051015|actin filament binding	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_05858	A	A1S	Potri.002G088200	Potri.002G088200(AS)	POPTR_0002s08890	sp|Q652K6|OML6_ORYSJ	Protein MEI2-like 6 OS=Oryza sativa subsp. japonica GN=ML6 PE=2 SV=1	AT1G37140.1	| Symbols: MCT1 | MEI2 C-terminal RRM only like 1 | chr1:14170351-14172040 REVERSE LENGTH=233	LOC_Os09g36140.1	protein|RNA recognition motif 2 domain containing protein, expressed	IMGA|Medtr5g059640.1	Terminal ear1-like 1 protein chr5 24039180-24040648 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003723|RNA binding	GO:0005739|mitochondrion
pt2_05859	A	A1S	Potri.002G088300	Potri.002G088300(AS)	POPTR_0002s08900	sp|P42732|RR13_ARATH	30S ribosomal protein S13, chloroplastic OS=Arabidopsis thaliana GN=RPS13 PE=2 SV=1	AT5G14320.1	| Symbols: | Ribosomal protein S13/S18 family | chr5:4617839-4618772 REVERSE LENGTH=169	LOC_Os03g49710.1	protein|ribosomal protein S13p/S18e, putative, expressed	NA	NA	GO:0006354|DNA-dependent transcription, elongation GO:0006412|translation GO:0009773|photosynthetic electron transport in photosystem I GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019684|photosynthesis, light reaction GO:0035304|regulation of protein dephosphorylation	GO:0003676|nucleic acid binding GO:0003723|RNA binding GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005840|ribosome GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope GO:0015935|small ribosomal subunit
pt2_05860	A	A1S	Potri.002G088400	Potri.002G088400(AS)	POPTR_0002s08910	sp|Q9CA19|RT13_ARATH	Small ribosomal subunit protein S13, mitochondrial OS=Arabidopsis thaliana GN=RPS13 PE=2 SV=1	AT1G77750.1	| Symbols: | Ribosomal protein S13/S18 family | chr1:29230346-29231490 REVERSE LENGTH=154	LOC_Os03g49710.1	protein|ribosomal protein S13p/S18e, putative, expressed	NA	NA	GO:0006354|DNA-dependent transcription, elongation GO:0006412|translation	GO:0003676|nucleic acid binding GO:0003723|RNA binding GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005739|mitochondrion GO:0005763|mitochondrial small ribosomal subunit GO:0005840|ribosome GO:0015935|small ribosomal subunit
pt2_05861	A	A1S	Potri.002G088500	Potri.002G088500(AS)	POPTR_0002s08920	sp|Q5Z676|CML29_ORYSJ	Probable calcium-binding protein CML29 OS=Oryza sativa subsp. japonica GN=CML29 PE=2 SV=1	AT1G24620.1	| Symbols: | EF hand calcium-binding protein family | chr1:8723893-8724453 REVERSE LENGTH=186	LOC_Os06g47640.1	protein|OsCML29 - Calmodulin-related calcium sensor protein, expressed	IMGA|Medtr5g027000.1	Calmodulin-like protein chr5 10940815-10940339 F EGN_Mt100125 20111014	GO:0009409|response to cold GO:0048610|cellular process involved in reproduction GO:0048767|root hair elongation GO:0048868|pollen tube development	GO:0005509|calcium ion binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_05862	A	A1S	Potri.002G088600	Potri.002G088600(AS)	POPTR_0002s08930	sp|P17569|NIA_CUCMA	Nitrate reductase [NADH] OS=Cucurbita maxima PE=2 SV=1	AT1G77760.1	| Symbols: NIA1, GNR1, NR1 | nitrate reductase 1 | chr1:29236005-29239367 REVERSE LENGTH=917	LOC_Os08g36480.1	protein|nitrate reductase, putative, expressed	IMGA|Medtr5g059820.1	Nitrate reductase chr5 24115824-24110118 F EGN_Mt100125 20111014	GO:0006809|nitric oxide biosynthetic process GO:0009416|response to light stimulus GO:0042128|nitrate assimilation GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0005515|protein binding GO:0008940|nitrate reductase activity GO:0009055|electron carrier activity GO:0016491|oxidoreductase activity GO:0020037|heme binding GO:0030151|molybdenum ion binding GO:0043546|molybdopterin cofactor binding GO:0046857|oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor GO:0046872|metal ion binding GO:0050660|flavin adenine dinucleotide binding	GO:0005739|mitochondrion GO:0005829|cytosol
pt2_05863	A	A1S	Potri.002G088700	Potri.002G088700(AS)	POPTR_0002s08940	NA	NA	AT4G08460.3	| Symbols: | Protein of unknown function (DUF1644) | chr4:5377378-5378202 REVERSE LENGTH=274	LOC_Os02g53110.2	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_05864	A	A1S	Potri.002G088900	Potri.002G088900(AS)	POPTR_0002s08950	sp|Q39008|M3K1_ARATH	Mitogen-activated protein kinase kinase kinase 1 OS=Arabidopsis thaliana GN=MEKK1 PE=1 SV=2	AT4G08500.1	| Symbols: MEKK1, ATMEKK1, MAPKKK8, ARAKIN | MAPK/ERK kinase kinase 1 | chr4:5404272-5407062 REVERSE LENGTH=608	LOC_Os03g15570.1	protein|STE_MEKK_ste11_MAP3K.12 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	IMGA|Medtr5g060350.1	Mitogen-activated protein kinase kinase kinase chr5 24326503-24318539 E EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0006468|protein phosphorylation GO:0006612|protein targeting to membrane GO:0006944|cellular membrane fusion GO:0006970|response to osmotic stress GO:0009409|response to cold GO:0009556|microsporogenesis GO:0009605|response to external stimulus GO:0009611|response to wounding GO:0009620|response to fungus GO:0009651|response to salt stress GO:0009695|jasmonic acid biosynthetic process GO:0009697|salicylic acid biosynthetic process GO:0009738|abscisic acid mediated signaling pathway GO:0009753|response to jasmonic acid stimulus GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010363|regulation of plant-type hypersensitive response GO:0030968|endoplasmic reticulum unfolded protein response GO:0031348|negative regulation of defense response GO:0043069|negative regulation of programmed cell death GO:0045087|innate immune response GO:0046686|response to cadmium ion GO:0046777|protein autophosphorylation GO:0050832|defense response to fungus GO:0052543|callose deposition in cell wall	GO:0003677|DNA binding GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004709|MAP kinase kinase kinase activity GO:0005515|protein binding GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0019900|kinase binding	GO:0005634|nucleus
pt2_05865	G	G1	NA	NA	POPTR_0002s08955	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05866	A	A1S	Potri.002G089100	Potri.002G089100(AS)	POPTR_0002s08960	NA	NA	AT1G36990.1	| Symbols: | unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G08510.1); Has 5029 Blast hits to 1779 proteins in 339 species: Archae - 2; Bacteria - 1372; Metazoa - 990; Fungi - 933; Plants - 111; Viruses - 28; Other Eukaryotes - 1593 (source: NCBI BLink). | chr1:14027594-14029711 REVERSE LENGTH=581	LOC_Os04g37540.1	protein|expressed protein	IMGA|Medtr5g060420.1	hypothetical protein chr5 24345440-24354426 E EGN_Mt100125 20111014	NA	NA	GO:0005634|nucleus
pt2_05867	A	A1S	Potri.002G089200	Potri.002G089200(AS)	POPTR_0002s08970	sp|Q03773|E13A_SOYBN	Glucan endo-1,3-beta-glucosidase OS=Glycine max PE=1 SV=1	AT1G77780.1	| Symbols: | Glycosyl hydrolase superfamily protein | chr1:29248437-29249528 REVERSE LENGTH=363	LOC_Os01g58730.1	protein|glycosyl hydrolases family 17, putative, expressed	IMGA|Medtr5g085580.1	"Glucan endo-1,3-beta-glucosidase" chr5 35975309-35973056 F EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0043169|cation binding	GO:0009507|chloroplast GO:0031225|anchored to membrane
pt2_05868	A	A1S	Potri.002G089300	Potri.002G089300(AS)	POPTR_0002s08980	sp|Q9CXL1|TM50A_MOUSE	Transmembrane protein 50A OS=Mus musculus GN=Tmem50a PE=2 SV=1	AT1G36980.1	| Symbols: | unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0220 (InterPro:IPR007919); Has 424 Blast hits to 424 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 228; Fungi - 120; Plants - 62; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). | chr1:14025084-14026727 FORWARD LENGTH=135	LOC_Os02g35880.1	protein|salt tolerant protein, putative, expressed	NA	NA	GO:0006661|phosphatidylinositol biosynthetic process GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_05869	B	B1S	Potri.002G089400	Potri.002G089400(BS)	POPTR_0002s09000	sp|Q9NQC1|JADE2_HUMAN	Protein Jade-2 OS=Homo sapiens GN=PHF15 PE=1 SV=2	AT1G77800.2	| Symbols: | PHD finger family protein | chr1:29253800-29260190 FORWARD LENGTH=1374	LOC_Os02g52960.1	protein|PHD-finger domain containing protein, putative, expressed	NA	NA	GO:0009630|gravitropism	GO:0008270|zinc ion binding	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_05870	A	A2S	Potri.002G089500	Potri.002G089500(AS) Potri.005G171700(DS)	POPTR_0002s09010	sp|Q9FLF7|MYST1_ARATH	Probable MYST-like histone acetyltransferase 1 OS=Arabidopsis thaliana GN=HAG4 PE=2 SV=1	AT5G64610.1	| Symbols: HAM1 | histone acetyltransferase of the MYST family 1 | chr5:25828333-25830503 REVERSE LENGTH=445	LOC_Os07g43360.1	protein|MYST-like histone acetyltransferase 1, putative, expressed	NA	NA	GO:0006281|DNA repair GO:0006355|regulation of transcription, DNA-dependent GO:0008284|positive regulation of cell proliferation GO:0010224|response to UV-B	GO:0003676|nucleic acid binding GO:0004402|histone acetyltransferase activity GO:0008270|zinc ion binding GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0005634|nucleus
pt2_05871	C	C1S	Potri.002G089600	Potri.002G089600(CS)	NA	NA	AT1G36940.1	| Symbols: | unknown protein; Has 21 Blast hits to 21 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:14004158-14004706 FORWARD LENGTH=182	NA	NA	IMGA|Medtr5g060450.1	hypothetical protein chr5 24362940-24360500 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0048046|apoplast
pt2_05872	C	C1S	Potri.002G089700	Potri.002G089700(CS)	sp|Q9LT31|VPS9A_ARATH	Vacuolar protein sorting-associated protein 9A OS=Arabidopsis thaliana GN=VPS9A PE=1 SV=1	AT3G19770.1	| Symbols: ATVPS9A, VPS9A, VPS9 | Vacuolar sorting protein 9 (VPS9) domain | chr3:6866916-6869114 FORWARD LENGTH=520	LOC_Os03g15650.1	protein|vacuolar sorting protein, putative, expressed	NA	NA	GO:0000919|cell plate assembly GO:0006486|protein glycosylation GO:0006810|transport GO:0009790|embryo development GO:0048528|post-embryonic root development	GO:0005089|Rho guanyl-nucleotide exchange factor activity GO:0005515|protein binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol GO:0016020|membrane
pt2_05873	A	A2S	Potri.002G089800	Potri.002G089800(AS) Potri.005G171400(DS)	POPTR_0002s09040	sp|Q6NQB7|B3GT7_ARATH	Beta-1,3-galactosyltransferase 7 OS=Arabidopsis thaliana GN=B3GALT7 PE=2 SV=1	AT1G77810.2	| Symbols: | Galactosyltransferase family protein | chr1:29260899-29263001 REVERSE LENGTH=384	LOC_Os02g35870.2	protein|galactosyltransferase, putative, expressed	IMGA|Medtr5g009700.1	Beta 1 3-glycosyltransferase-like protein I chr5 2172538-2165300 H EGN_Mt100125 20111014	GO:0006486|protein glycosylation	GO:0008378|galactosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups GO:0048531|beta-1,3-galactosyltransferase activity	GO:0005794|Golgi apparatus GO:0016020|membrane
pt2_05874	A	A1S	Potri.002G089900	Potri.002G089900(AS)	POPTR_0002s09050	sp|Q84WU6|ARFQ_ARATH	Auxin response factor 17 OS=Arabidopsis thaliana GN=ARF17 PE=2 SV=1	AT1G77850.1	| Symbols: ARF17 | auxin response factor 17 | chr1:29272405-29275193 FORWARD LENGTH=585	LOC_Os10g33940.1	protein|auxin response factor 18, putative, expressed	IMGA|Medtr5g061220.1	Auxin response factor chr5 24648245-24646440 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009555|pollen development GO:0009653|anatomical structure morphogenesis GO:0009725|response to hormone stimulus GO:0009734|auxin mediated signaling pathway GO:0048830|adventitious root development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_05875	A	A1S	Potri.002G090000	Potri.002G090000(AS)	POPTR_0002s09060	sp|A9B9L4|GRPE_PROM4	Protein grpE OS=Prochlorococcus marinus (strain MIT 9211) GN=grpE PE=3 SV=1	AT1G36390.2	| Symbols: | Co-chaperone GrpE family protein | chr1:13701811-13703524 REVERSE LENGTH=279	LOC_Os02g39870.1	protein|co-chaperone GrpE protein, putative, expressed	NA	NA	GO:0006457|protein folding GO:0009793|embryo development ending in seed dormancy GO:0010027|thylakoid membrane organization GO:0010228|vegetative to reproductive phase transition of meristem GO:0016226|iron-sulfur cluster assembly GO:0048481|ovule development	GO:0000774|adenyl-nucleotide exchange factor activity GO:0005507|copper ion binding GO:0042803|protein homodimerization activity GO:0051087|chaperone binding	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_05876	A	A1S	Potri.002G090100	Potri.002G090100(AS)	POPTR_0002s09070	NA	NA	AT1G36380.1	| Symbols: | unknown protein; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 14 Blast hits to 14 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:13700917-13701346 FORWARD LENGTH=84	LOC_Os02g34730.1	protein|transposon protein, putative, Mariner sub-class, expressed	IMGA|Medtr5g062750.1	hypothetical protein chr5 25310188-25313444 F EGN_Mt100125 20111014	GO:0006661|phosphatidylinositol biosynthetic process	NA	GO:0009507|chloroplast
pt2_05877	A	A1S	Potri.002G090200	Potri.002G090200(AS)	POPTR_0002s09080	sp|Q54EW1|GLYC2_DICDI	Serine hydroxymethyltransferase 2 OS=Dictyostelium discoideum GN=shmt2 PE=3 SV=1	AT1G36370.1	| Symbols: SHM7 | serine hydroxymethyltransferase 7 | chr1:13696240-13698576 REVERSE LENGTH=598	LOC_Os01g65410.1	protein|serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed	IMGA|Medtr5g030950.1	Serine hydroxymethyltransferase chr5 12843132-12838759 F EGN_Mt100125 20111014	GO:0006544|glycine metabolic process GO:0006563|L-serine metabolic process GO:0046686|response to cadmium ion	GO:0003824|catalytic activity GO:0004372|glycine hydroxymethyltransferase activity GO:0030170|pyridoxal phosphate binding	GO:0005737|cytoplasm
pt2_05878	G	G1	NA	NA	POPTR_0002s09080	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05879	A	A1S	Potri.002G090300	Potri.002G090300(AS)	POPTR_0002s09090	NA	NA	AT1G22030.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G77855.1); Has 99 Blast hits to 99 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 96; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:7759337-7760415 REVERSE LENGTH=333	LOC_Os01g65420.1	protein|expressed protein	IMGA|Medtr5g060880.1	hypothetical protein chr5 24528016-24526257 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_05880	A	A2S	Potri.002G090300	Potri.002G090300(AS) Potri.005G170700(BS)	POPTR_0002s09090	NA	NA	AT1G22030.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G77855.1); Has 99 Blast hits to 99 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 96; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:7759337-7760415 REVERSE LENGTH=333	LOC_Os01g65420.1	protein|expressed protein	IMGA|Medtr5g060880.1	hypothetical protein chr5 24528016-24526257 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_05881	A	A1S	Potri.002G090400	Potri.002G090400(AS)	POPTR_0002s09100	sp|C8VCL5|Y0929_EMENI	Uncharacterized rhomboid protein AN10929 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=AN10929 PE=3 SV=1	AT1G77860.1	| Symbols: KOM | Rhomboid-related intramembrane serine protease family protein | chr1:29282643-29284458 REVERSE LENGTH=351	LOC_Os11g47840.1	protein|OsRhmbd18 - Putative Rhomboid homologue, expressed	IMGA|contig_69015_1.1	Rhomboid family protein expressed contig_69015 1651-2320 H PREDN 20111014	GO:0006508|proteolysis GO:0008150|biological_process	GO:0004252|serine-type endopeptidase activity	GO:0016021|integral to membrane
pt2_05882	A	A1S	Potri.002G090500	Potri.002G090500(AS)	POPTR_0002s09110	sp|Q9LZM3|PPCS2_ARATH	Phosphopantothenate--cysteine ligase 2 OS=Arabidopsis thaliana GN=PPCS2 PE=2 SV=2	AT1G12350.1	| Symbols: ATCOAB, COAB | 4-phospho-panto-thenoylcysteine synthetase | chr1:4198870-4200633 FORWARD LENGTH=317	LOC_Os02g36550.1	protein|phosphopantothenate--cysteine ligase, putative, expressed	NA	NA	GO:0015937|coenzyme A biosynthetic process GO:0035556|intracellular signal transduction	GO:0003824|catalytic activity GO:0004632|phosphopantothenate--cysteine ligase activity	GO:0009507|chloroplast GO:0016020|membrane
pt2_05883	A	A1S	Potri.002G090600	Potri.002G090600(AS)	POPTR_0002s09120	sp|B0S1F7|DNAJ_FINM2	Chaperone protein DnaJ OS=Finegoldia magna (strain ATCC 29328) GN=dnaJ PE=3 SV=1	AT1G77930.2	| Symbols: | Chaperone DnaJ-domain superfamily protein | chr1:29301184-29302467 FORWARD LENGTH=271	LOC_Os07g43330.1	protein|heat shock protein DnaJ, putative, expressed	NA	NA	GO:0006457|protein folding	GO:0031072|heat shock protein binding	NA
pt2_05884	A	A2S	Potri.002G090700	Potri.002G090700(AS) Potri.005G170500(DS)	POPTR_0002s09130	sp|Q93ZE2|TGA7_ARATH	Transcription factor TGA7 OS=Arabidopsis thaliana GN=TGA7 PE=1 SV=1	AT1G77920.1	| Symbols: | bZIP transcription factor family protein | chr1:29298959-29300607 FORWARD LENGTH=368	LOC_Os04g54474.3	protein|transcription factor, putative, expressed	IMGA|Medtr5g060950.1	Transcription factor TGA3 chr5 24561413-24559127 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009410|response to xenobiotic stimulus GO:0009617|response to bacterium GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0010043|response to zinc ion GO:0010167|response to nitrate GO:0010260|organ senescence GO:0015706|nitrate transport GO:0030968|endoplasmic reticulum unfolded protein response GO:0042742|defense response to bacterium	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0005516|calmodulin binding GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_05885	A	A1S	Potri.002G090800	Potri.002G090800(AS)	POPTR_0002s09140	sp|Q9LES3|AI5L2_ARATH	ABSCISIC ACID-INSENSITIVE 5-like protein 2 OS=Arabidopsis thaliana GN=DPBF3 PE=1 SV=1	AT3G56850.1	| Symbols: AREB3, DPBF3 | ABA-responsive element binding protein 3 | chr3:21046554-21047894 REVERSE LENGTH=297	LOC_Os01g59760.1	protein|bZIP transcription factor, putative, expressed	IMGA|Medtr5g060990.1	ABSCISIC ACID-INSENSITIVE 5-like protein chr5 24575394-24576317 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006950|response to stress GO:0007623|circadian rhythm GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0043565|sequence-specific DNA binding GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_05886	A	A1S	Potri.002G090900	Potri.002G090900(AS)	POPTR_0002s09150	NA	NA	AT4G08540.1	| Symbols: | DNA-directed RNA polymerase II protein | chr4:5433760-5436326 FORWARD LENGTH=473	LOC_Os07g43322.1	protein|expressed protein	IMGA|Medtr5g061040.1	hypothetical protein chr5 24598902-24590030 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_05887	A	A1S	Potri.002G091000	Potri.002G091000(AS)	POPTR_0002s09160	sp|Q84WN0|Y4920_ARATH	Uncharacterized protein At4g37920, chloroplastic OS=Arabidopsis thaliana GN=At4g37920 PE=1 SV=2	AT1G36320.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37920.1); Has 93 Blast hits to 90 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). | chr1:13671876-13673939 FORWARD LENGTH=414	LOC_Os01g20110.1	protein|expressed protein	IMGA|Medtr5g030900.1	hypothetical protein chr5 12799084-12794959 E EGN_Mt100125 20111014	GO:0008150|biological_process GO:0009073|aromatic amino acid family biosynthetic process GO:0016226|iron-sulfur cluster assembly	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_05888	C	C1S	Potri.002G091100	Potri.002G091100(CS)	sp|Q0WNP3|PP319_ARATH	Pentatricopeptide repeat-containing protein At4g18520 OS=Arabidopsis thaliana GN=PCMP-A2 PE=2 SV=1	AT4G18520.1	| Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr4:10215250-10217103 REVERSE LENGTH=617	LOC_Os03g44210.1	protein|expressed protein	IMGA|Medtr5g018690.1	Pentatricopeptide repeat-containing protein chr5 6711674-6714567 E EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005739|mitochondrion
pt2_05889	A	A1S	Potri.002G091200	Potri.002G091200(AS)	POPTR_0002s09180	NA	NA	AT4G08550.1	| Symbols: | electron carriers;protein disulfide oxidoreductases | chr4:5444345-5446825 FORWARD LENGTH=637	LOC_Os06g12030.2	protein|glutaredoxin domain containing protein, putative, expressed	IMGA|Medtr5g061340.1	Vacuolar membrane-associated protein iml1 chr5 24693207-24698717 H EGN_Mt100125 20111014	GO:0045454|cell redox homeostasis	GO:0009055|electron carrier activity GO:0015035|protein disulfide oxidoreductase activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05890	A	A1S	Potri.002G091300	Potri.002G091300(AS)	POPTR_0002s09190	sp|Q80Y20|ALKB8_MOUSE	Alkylated DNA repair protein alkB homolog 8 OS=Mus musculus GN=Alkbh8 PE=2 SV=1	AT1G36310.2	| Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr1:13669644-13670934 FORWARD LENGTH=404	LOC_Os02g51490.1	protein|methyltransferase, putative, expressed	NA	NA	GO:0002098|tRNA wobble uridine modification GO:0008152|metabolic process	GO:0008168|methyltransferase activity GO:0008175|tRNA methyltransferase activity	GO:0009507|chloroplast
pt2_05891	A	A1S	Potri.002G091300	Potri.002G091300(AS)	POPTR_0002s09190	sp|Q80Y20|ALKB8_MOUSE	Alkylated DNA repair protein alkB homolog 8 OS=Mus musculus GN=Alkbh8 PE=2 SV=1	AT1G36310.2	| Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr1:13669644-13670934 FORWARD LENGTH=404	LOC_Os02g51490.1	protein|methyltransferase, putative, expressed	NA	NA	GO:0002098|tRNA wobble uridine modification GO:0008152|metabolic process	GO:0008168|methyltransferase activity GO:0008175|tRNA methyltransferase activity	GO:0009507|chloroplast
pt2_05892	A	A1S	Potri.002G091300	Potri.002G091300(AS)	POPTR_0002s09190	sp|Q80Y20|ALKB8_MOUSE	Alkylated DNA repair protein alkB homolog 8 OS=Mus musculus GN=Alkbh8 PE=2 SV=1	AT1G36310.2	| Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr1:13669644-13670934 FORWARD LENGTH=404	LOC_Os02g51490.1	protein|methyltransferase, putative, expressed	NA	NA	GO:0002098|tRNA wobble uridine modification GO:0008152|metabolic process	GO:0008168|methyltransferase activity GO:0008175|tRNA methyltransferase activity	GO:0009507|chloroplast
pt2_05893	A	A1S	Potri.002G091400	Potri.002G091400(AS)	POPTR_0002s09200	NA	NA	AT5G02130.1	| Symbols: NDP1 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:419747-421958 REVERSE LENGTH=420	LOC_Os05g38330.1	protein|NDP1, putative, expressed	NA	NA	GO:0008150|biological_process GO:0009688|abscisic acid biosynthetic process	NA	GO:0005575|cellular_component
pt2_05894	A	A1S	Potri.002G091500	Potri.002G091500(AS)	POPTR_0002s09210	sp|Q9ZQI7|ALD1_ARATH	Aminotransferase ALD1 OS=Arabidopsis thaliana GN=ALD1 PE=2 SV=2	AT2G13810.1	| Symbols: ALD1 | AGD2-like defense response protein 1 | chr2:5768489-5772138 FORWARD LENGTH=456	LOC_Os03g18810.1	protein|aminotransferase, classes I and II, domain containing protein, expressed	NA	NA	GO:0009058|biosynthetic process GO:0009089|lysine biosynthetic process via diaminopimelate GO:0009693|ethylene biosynthetic process GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0010150|leaf senescence GO:0042742|defense response to bacterium	GO:0003824|catalytic activity GO:0008483|transaminase activity GO:0010285|L,L-diaminopimelate aminotransferase activity GO:0016740|transferase activity GO:0030170|pyridoxal phosphate binding	GO:0009507|chloroplast
pt2_05895	A	A1S	Potri.002G091600	Potri.002G091600(AS)	POPTR_0002s09220	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05896	A	A1S	Potri.002G091700	Potri.002G091700(AS)	POPTR_0002s09230	NA	NA	AT1G22060.1	| Symbols: | LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: FBD, F-box and Leucine Rich Repeat domains containing protein (TAIR:AT1G22000.1); Has 84739 Blast hits to 38714 proteins in 2257 species: Archae - 1436; Bacteria - 11314; Metazoa - 40747; Fungi - 7706; Plants - 4675; Viruses - 308; Other Eukaryotes - 18553 (source: NCBI BLink). | chr1:7773373-7780586 REVERSE LENGTH=1999	LOC_Os10g21940.1	protein|expressed protein	IMGA|Medtr5g010520.1	hypothetical protein chr5 2590332-2585570 E EGN_Mt100125 20111014	GO:0010075|regulation of meristem growth	NA	GO:0005737|cytoplasm GO:0005773|vacuole
pt2_05897	C	C1S	Potri.002G091700	Potri.002G091700(CS)	NA	NA	AT1G22060.1	| Symbols: | LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: FBD, F-box and Leucine Rich Repeat domains containing protein (TAIR:AT1G22000.1); Has 84739 Blast hits to 38714 proteins in 2257 species: Archae - 1436; Bacteria - 11314; Metazoa - 40747; Fungi - 7706; Plants - 4675; Viruses - 308; Other Eukaryotes - 18553 (source: NCBI BLink). | chr1:7773373-7780586 REVERSE LENGTH=1999	LOC_Os10g21940.1	protein|expressed protein	IMGA|Medtr5g010520.1	hypothetical protein chr5 2590332-2585570 E EGN_Mt100125 20111014	GO:0010075|regulation of meristem growth	NA	GO:0005737|cytoplasm GO:0005773|vacuole
pt2_05898	A	A1S	Potri.002G091700	Potri.002G091700(AS)	POPTR_0002s09230	NA	NA	AT1G22060.1	| Symbols: | LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: FBD, F-box and Leucine Rich Repeat domains containing protein (TAIR:AT1G22000.1); Has 84739 Blast hits to 38714 proteins in 2257 species: Archae - 1436; Bacteria - 11314; Metazoa - 40747; Fungi - 7706; Plants - 4675; Viruses - 308; Other Eukaryotes - 18553 (source: NCBI BLink). | chr1:7773373-7780586 REVERSE LENGTH=1999	LOC_Os10g21940.1	protein|expressed protein	IMGA|Medtr5g010520.1	hypothetical protein chr5 2590332-2585570 E EGN_Mt100125 20111014	GO:0010075|regulation of meristem growth	NA	GO:0005737|cytoplasm GO:0005773|vacuole
pt2_05899	C	C2S	Potri.002G091700	Potri.002G091700(CS) Potri.005G170100(CS)	NA	NA	AT1G22060.1	| Symbols: | LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: FBD, F-box and Leucine Rich Repeat domains containing protein (TAIR:AT1G22000.1); Has 84739 Blast hits to 38714 proteins in 2257 species: Archae - 1436; Bacteria - 11314; Metazoa - 40747; Fungi - 7706; Plants - 4675; Viruses - 308; Other Eukaryotes - 18553 (source: NCBI BLink). | chr1:7773373-7780586 REVERSE LENGTH=1999	LOC_Os10g21940.1	protein|expressed protein	IMGA|Medtr5g010520.1	hypothetical protein chr5 2590332-2585570 E EGN_Mt100125 20111014	GO:0010075|regulation of meristem growth	NA	GO:0005737|cytoplasm GO:0005773|vacuole
pt2_05900	A	A2S	Potri.002G091700	Potri.002G091700(AS) Potri.005G170100(BS)	POPTR_0002s09230	NA	NA	AT1G22060.1	| Symbols: | LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: FBD, F-box and Leucine Rich Repeat domains containing protein (TAIR:AT1G22000.1); Has 84739 Blast hits to 38714 proteins in 2257 species: Archae - 1436; Bacteria - 11314; Metazoa - 40747; Fungi - 7706; Plants - 4675; Viruses - 308; Other Eukaryotes - 18553 (source: NCBI BLink). | chr1:7773373-7780586 REVERSE LENGTH=1999	LOC_Os10g21940.1	protein|expressed protein	IMGA|Medtr5g010520.1	hypothetical protein chr5 2590332-2585570 E EGN_Mt100125 20111014	GO:0010075|regulation of meristem growth	NA	GO:0005737|cytoplasm GO:0005773|vacuole
pt2_05901	C	C1S	Potri.002G091800	Potri.002G091800(CS)	sp|Q8GWJ6|MUB6_ARATH	Membrane-anchored ubiquitin-fold protein 6 OS=Arabidopsis thaliana GN=MUB6 PE=1 SV=1	AT1G22050.1	| Symbols: MUB6 | membrane-anchored ubiquitin-fold protein 6 precursor | chr1:7771897-7772843 FORWARD LENGTH=119	LOC_Os02g51500.2	protein|membrane-anchored ubiquitin-fold protein, putative, expressed	NA	NA	NA	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005886|plasma membrane
pt2_05902	A	A1S	Potri.002G091900	Potri.002G091900(AS)	POPTR_0002s09250	sp|Q9LM55|FBK8_ARATH	F-box/kelch-repeat protein At1g22040 OS=Arabidopsis thaliana GN=At1g22040 PE=2 SV=1	AT1G22040.1	| Symbols: | Galactose oxidase/kelch repeat superfamily protein | chr1:7768370-7769797 FORWARD LENGTH=475	LOC_Os10g21930.2	protein|OsFBK21 - F-box domain and kelch repeat containing protein, expressed	IMGA|Medtr5g039390.1	F-box/kelch-repeat protein SKIP11 chr5 16927948-16931013 F EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation	GO:0003674|molecular_function	GO:0005737|cytoplasm
pt2_05903	A	A1S	Potri.002G092000	Potri.002G092000(AS)	POPTR_0002s09260	NA	NA	AT1G22110.1	| Symbols: | structural constituent of ribosome | chr1:7801625-7802473 REVERSE LENGTH=282	NA	NA	IMGA|Medtr5g061650.1	hypothetical protein chr5 24804426-24803707 H EGN_Mt100125 20111014	GO:0006412|translation GO:0009827|plant-type cell wall modification GO:0009860|pollen tube growth	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005634|nucleus GO:0005840|ribosome
pt2_05904	A	A1S	Potri.002G092100	Potri.002G092100(AS)	POPTR_0002s09270	sp|Q9LX20|ASPL1_ARATH	Aspartic proteinase-like protein 1 OS=Arabidopsis thaliana GN=At5g10080 PE=1 SV=1	AT5G10080.1	| Symbols: | Eukaryotic aspartyl protease family protein | chr5:3150843-3153380 FORWARD LENGTH=528	LOC_Os02g51540.1	protein|eukaryotic aspartyl protease domain containing protein, expressed	IMGA|Medtr5g061690.1	Aspartic proteinase-like protein chr5 24823344-24828426 E EGN_Mt100125 20111014	GO:0006508|proteolysis	GO:0004190|aspartic-type endopeptidase activity	GO:0005576|extracellular region GO:0031225|anchored to membrane GO:0046658|anchored to plasma membrane
pt2_05905	A	A1S	Potri.002G092200	Potri.002G092200(AS)	POPTR_0002s09280	sp|Q9SZN7|HIP26_ARATH	Heavy metal-associated isoprenylated plant protein 26 OS=Arabidopsis thaliana GN=HIPP26 PE=1 SV=1	AT4G08570.1	| Symbols: | Heavy metal transport/detoxification superfamily protein | chr4:5455123-5455975 REVERSE LENGTH=150	LOC_Os09g20000.1	protein|heavy metal-associated domain containing protein, expressed	IMGA|Medtr5g025150.1	hypothetical protein chr5 9939089-9937962 E EGN_Mt100125 20111014	GO:0030001|metal ion transport	GO:0046872|metal ion binding	GO:0005575|cellular_component
pt2_05906	A	A1S	Potri.002G092300	Potri.002G092300(AS)	POPTR_0002s09290	sp|Q38836|AGL11_ARATH	Agamous-like MADS-box protein AGL11 OS=Arabidopsis thaliana GN=AGL11 PE=1 SV=1	AT1G22130.1	| Symbols: AGL104 | AGAMOUS-like 104 | chr1:7812387-7814259 REVERSE LENGTH=335	LOC_Os06g11970.1	protein|OsMADS63 - MADS-box family gene with MIKC* type-box, expressed	IMGA|AC232874_1024.1	MADS-box transcription factor AC232874.5 95289-97550 H EGN_Mt100125 20111014	GO:0009555|pollen development GO:0009827|plant-type cell wall modification GO:0009860|pollen tube growth GO:0010584|pollen exine formation	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_05907	A	A1S	Potri.002G092400	Potri.002G092400(AS)	POPTR_0002s09300	sp|P53393|SUT3_STYHA	Low affinity sulfate transporter 3 OS=Stylosanthes hamata GN=ST3 PE=2 SV=1	AT1G77990.1	| Symbols: AST56, SULTR2;2 | STAS domain / Sulfate transporter family | chr1:29317965-29323249 REVERSE LENGTH=677	LOC_Os03g09940.1	protein|sulfate transporter, putative, expressed	IMGA|Medtr5g061860.1	Sulfate transporter-like protein chr5 24912655-24907593 E EGN_Mt100125 20111014	GO:0006810|transport GO:0008272|sulfate transport GO:0055085|transmembrane transport	GO:0005215|transporter activity GO:0008271|secondary active sulfate transmembrane transporter activity GO:0015116|sulfate transmembrane transporter activity	GO:0016020|membrane GO:0016021|integral to membrane
pt2_05908	A	A1S	Potri.002G092500	Potri.002G092500(AS)	POPTR_0002s09310	sp|Q9FEP7|SUT13_ARATH	Sulfate transporter 1.3 OS=Arabidopsis thaliana GN=SULTR1;3 PE=2 SV=1	AT1G22150.1	| Symbols: SULTR1;3 | sulfate transporter 1;3 | chr1:7818361-7821344 FORWARD LENGTH=656	LOC_Os03g09970.1	protein|sulfate transporter, putative, expressed	IMGA|Medtr5g061880.1	Sulfate transporter chr5 24922921-24927608 H EGN_Mt100125 20111014	GO:0006810|transport GO:0008272|sulfate transport GO:0055085|transmembrane transport	GO:0005215|transporter activity GO:0008271|secondary active sulfate transmembrane transporter activity GO:0015116|sulfate transmembrane transporter activity	GO:0016020|membrane GO:0016021|integral to membrane
pt2_05909	A	A1S	Potri.002G092600	Potri.002G092600(AS)	POPTR_0002s09320	sp|Q8YN91|MNME_NOSS1	tRNA modification GTPase MnmE OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=mnmE PE=1 SV=1	AT1G78010.1	| Symbols: | tRNA modification GTPase, putative | chr1:29333535-29336297 FORWARD LENGTH=560	LOC_Os08g31460.1	protein|GTPase of unknown function domain containing protein, putative, expressed	NA	NA	GO:0006184|GTP catabolic process GO:0006400|tRNA modification GO:0006897|endocytosis GO:0007264|small GTPase mediated signal transduction	GO:0003924|GTPase activity GO:0005525|GTP binding	GO:0005622|intracellular GO:0005737|cytoplasm
pt2_05910	A	A1S	Potri.002G092700	Potri.002G092700(AS)	POPTR_0002s09330	sp|Q38970|ACC1_ARATH	Acetyl-CoA carboxylase 1 OS=Arabidopsis thaliana GN=ACC1 PE=1 SV=1	AT1G36160.2	| Symbols: ACC1 | acetyl-CoA carboxylase 1 | chr1:13534196-13543773 FORWARD LENGTH=2254	LOC_Os10g21910.1	protein|acetyl-CoA carboxylase, putative, expressed	IMGA|Medtr1g071610.1	Methylcrotonoyl-CoA carboxylase subunit alpha chr1 17713127-17721590 F EGN_Mt100125 20111014	GO:0006094|gluconeogenesis GO:0007010|cytoskeleton organization GO:0009630|gravitropism GO:0009631|cold acclimation GO:0009735|response to cytokinin stimulus GO:0009793|embryo development ending in seed dormancy GO:0009933|meristem structural organization GO:0010072|primary shoot apical meristem specification GO:0010498|proteasomal protein catabolic process GO:0030497|fatty acid elongation GO:0048364|root development GO:0048367|shoot development	GO:0003824|catalytic activity GO:0003989|acetyl-CoA carboxylase activity GO:0004075|biotin carboxylase activity GO:0005524|ATP binding GO:0016874|ligase activity GO:0046872|metal ion binding	GO:0005737|cytoplasm GO:0005886|plasma membrane
pt2_05911	A	A1S	Potri.002G092800	Potri.002G092800(AS)	POPTR_0002s09340	sp|Q8VYI9|NLTL5_ARATH	Non-specific lipid-transfer protein-like protein At5g64080 OS=Arabidopsis thaliana GN=At5g64080 PE=1 SV=1	AT5G64080.2	| Symbols: | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr5:25645475-25646638 REVERSE LENGTH=178	LOC_Os07g07860.1	protein|LTPL76 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	IMGA|Medtr5g070360.1	Non-specific lipid-transfer protein chr5 28816605-28814460 F EGN_Mt100125 20111014	GO:0006869|lipid transport	GO:0008289|lipid binding	GO:0005886|plasma membrane GO:0031225|anchored to membrane GO:0046658|anchored to plasma membrane
pt2_05912	A	A1S	Potri.002G092900	Potri.002G092900(AS)	POPTR_0002s09350	NA	NA	AT1G22160.1	| Symbols: | Protein of unknown function (DUF581) | chr1:7823238-7823774 FORWARD LENGTH=147	LOC_Os08g31510.1	protein|DUF581 domain containing protein, expressed	IMGA|Medtr5g013770.1	hypothetical protein chr5 4179788-4180781 F EGN_Mt100125 20111014	NA	NA	GO:0005634|nucleus
pt2_05913	G	G1	NA	NA	POPTR_0002s09360	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05914	A	A1S	Potri.002G093100	Potri.002G093100(AS)	POPTR_0002s09370	sp|P33050|PSC13_MAIZE	Pollen-specific protein C13 OS=Zea mays GN=MGS1 PE=2 SV=1	AT4G08685.1	| Symbols: SAH7 | Pollen Ole e 1 allergen and extensin family protein | chr4:5550563-5551259 FORWARD LENGTH=159	LOC_Os10g22590.1	protein|POEI24 - Pollen Ole e I allergen and extensin family protein precursor, expressed	NA	NA	GO:0006816|calcium ion transport GO:0007030|Golgi organization GO:0008150|biological_process GO:0009651|response to salt stress GO:0019344|cysteine biosynthetic process	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_05915	A	A1S	Potri.002G093200	Potri.002G093200(AS)	POPTR_0002s09380	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05916	A	A2S	Potri.002G093300	Potri.002G093300(AS) Potri.005G168000(DS)	POPTR_0002s09390	sp|Q6MEW4|GPMA_PARUW	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Protochlamydia amoebophila (strain UWE25) GN=gpmA PE=3 SV=1	AT1G22170.1	| Symbols: | Phosphoglycerate mutase family protein | chr1:7826603-7828055 FORWARD LENGTH=334	LOC_Os02g51590.1	protein|phosphoglycerate mutase, putative, expressed	NA	NA	GO:0006096|glycolysis GO:0008152|metabolic process	GO:0003824|catalytic activity GO:0016868|intramolecular transferase activity, phosphotransferases	GO:0009507|chloroplast
pt2_05917	A	A1S	Potri.002G093400	Potri.002G093400(AS)	POPTR_0002s09400	sp|Q55CU8|RSC5_DICDI	Random slug protein 5 OS=Dictyostelium discoideum GN=rsc5 PE=2 SV=1	AT4G08690.1	| Symbols: | Sec14p-like phosphatidylinositol transfer family protein | chr4:5551521-5552713 REVERSE LENGTH=301	LOC_Os02g51610.1	protein|CRAL/TRIO domain containing protein, expressed	IMGA|Medtr5g062310.1	Clavesin chr5 25079243-25077091 F EGN_Mt100125 20111014	GO:0006810|transport	GO:0005215|transporter activity	GO:0005634|nucleus
pt2_05918	A	A1S	Potri.002G093500	Potri.002G093500(AS)	POPTR_0002s09410	sp|Q00416|SEN1_YEAST	Helicase SEN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEN1 PE=1 SV=2	AT4G30100.1	| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr4:14714191-14719335 FORWARD LENGTH=1311	LOC_Os04g34670.1	protein|tRNA-splicing endonuclease positive effector-related, putative, expressed	IMGA|Medtr5g053930.1	Helicase sen1 chr5 21669980-21650598 E EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_05919	B	B1S	Potri.002G093600	Potri.002G093600(BS)	POPTR_0002s09420	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05920	A	A1S	Potri.002G093800	Potri.002G093800(AS)	POPTR_0002s09430	sp|B1WC86|MPPE1_RAT	Metallophosphoesterase 1 OS=Rattus norvegicus GN=Mppe1 PE=2 SV=1	NA	NA	LOC_Os06g11910.1	protein|expressed protein	NA	NA	GO:0006816|calcium ion transport GO:0006882|cellular zinc ion homeostasis GO:0009624|response to nematode	GO:0004722|protein serine/threonine phosphatase activity GO:0016787|hydrolase activity	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_05921	A	A1S	Potri.002G093800	Potri.002G093800(AS)	POPTR_0002s09430	sp|B1WC86|MPPE1_RAT	Metallophosphoesterase 1 OS=Rattus norvegicus GN=Mppe1 PE=2 SV=1	NA	NA	LOC_Os06g11910.1	protein|expressed protein	NA	NA	GO:0006816|calcium ion transport GO:0006882|cellular zinc ion homeostasis GO:0009624|response to nematode	GO:0004722|protein serine/threonine phosphatase activity GO:0016787|hydrolase activity	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_05922	A	A1S	Potri.002G093800	Potri.002G093800(AS)	POPTR_0002s09430	sp|B1WC86|MPPE1_RAT	Metallophosphoesterase 1 OS=Rattus norvegicus GN=Mppe1 PE=2 SV=1	NA	NA	LOC_Os06g11910.1	protein|expressed protein	NA	NA	GO:0006816|calcium ion transport GO:0006882|cellular zinc ion homeostasis GO:0009624|response to nematode	GO:0004722|protein serine/threonine phosphatase activity GO:0016787|hydrolase activity	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_05923	A	A1S	Potri.002G093900	Potri.002G093900(AS)	POPTR_0002s09440	sp|Q9SGZ5|BXL7_ARATH	Probable beta-D-xylosidase 7 OS=Arabidopsis thaliana GN=BXL7 PE=2 SV=2	AT1G78060.1	| Symbols: | Glycosyl hydrolase family protein | chr1:29349796-29352868 REVERSE LENGTH=767	LOC_Os02g51620.1	protein|glycosyl hydrolase family 3 protein, putative, expressed	IMGA|Medtr5g062650.1	hypothetical protein chr5 25245536-25250954 E EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0010075|regulation of meristem growth	GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0005576|extracellular region GO:0005618|cell wall GO:0009505|plant-type cell wall GO:0009506|plasmodesma GO:0009507|chloroplast GO:0048046|apoplast
pt2_05924	A	A1S	Potri.002G094000	Potri.002G094000(AS)	POPTR_0002s09450	sp|Q9SGZ5|BXL7_ARATH	Probable beta-D-xylosidase 7 OS=Arabidopsis thaliana GN=BXL7 PE=2 SV=2	AT1G78060.1	| Symbols: | Glycosyl hydrolase family protein | chr1:29349796-29352868 REVERSE LENGTH=767	LOC_Os02g51620.1	protein|glycosyl hydrolase family 3 protein, putative, expressed	IMGA|Medtr5g062430.1	Xylan 1 4-beta-xylosidase chr5 25153086-25159051 E EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0010075|regulation of meristem growth	GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0005576|extracellular region GO:0005618|cell wall GO:0009505|plant-type cell wall GO:0009506|plasmodesma GO:0009507|chloroplast GO:0048046|apoplast
pt2_05925	A	A1S	Potri.002G094100	Potri.002G094100(AS)	POPTR_0002s09470	sp|Q9Y7K5|YGI3_SCHPO	Uncharacterized WD repeat-containing protein C2A9.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC2A9.03 PE=2 SV=2	AT1G78070.1	| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr1:29355219-29358368 FORWARD LENGTH=449	LOC_Os03g26870.1	protein|WD-40 repeat family protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005737|cytoplasm GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_05926	A	A1S	Potri.002G094200	Potri.002G094200(AS)	POPTR_0002s09480	sp|Q8H1E4|RAP24_ARATH	Ethylene-responsive transcription factor RAP2-4 OS=Arabidopsis thaliana GN=RAP2-4 PE=1 SV=1	AT1G78080.1	| Symbols: RAP2.4 | related to AP2 4 | chr1:29364790-29365794 FORWARD LENGTH=334	LOC_Os02g51670.1	protein|ethylene-responsive transcription factor, putative, expressed	IMGA|Medtr5g062700.1	Ethylene-responsive transcription factor RAP2-4 chr5 25273709-25276211 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006970|response to osmotic stress GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009416|response to light stimulus GO:0009611|response to wounding GO:0009651|response to salt stress GO:0009736|cytokinin mediated signaling pathway GO:0009873|ethylene mediated signaling pathway GO:0010017|red or far-red light signaling pathway GO:0045595|regulation of cell differentiation GO:0071472|cellular response to salt stress	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_05927	C	C1S	Potri.002G094300	Potri.002G094300(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05928	A	A1S	Potri.002G094400	Potri.002G094400(AS)	POPTR_0002s09500	sp|Q803I2|ERGI3_DANRE	Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Danio rerio GN=ergic3 PE=2 SV=1	AT1G36050.2	| Symbols: | Endoplasmic reticulum vesicle transporter protein | chr1:13450467-13453055 FORWARD LENGTH=386	LOC_Os04g38340.1	protein|endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed	IMGA|Medtr5g062720.1	Endoplasmic reticulum-Golgi intermediate compartment protein chr5 25295217-25286148 F EGN_Mt100125 20111014	GO:0006633|fatty acid biosynthetic process	GO:0003674|molecular_function	GO:0005774|vacuolar membrane GO:0005783|endoplasmic reticulum GO:0005794|Golgi apparatus
pt2_05929	A	A1S	Potri.002G094500	Potri.002G094500(AS)	POPTR_0002s09510	sp|Q5HZ05|TPPJ_ARATH	Probable trehalose-phosphate phosphatase J OS=Arabidopsis thaliana GN=TPPJ PE=1 SV=1	AT5G65140.1	| Symbols: TPPJ | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr5:26019878-26022077 REVERSE LENGTH=370	LOC_Os08g31630.1	protein|uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed	IMGA|Medtr5g063080.1	Trehalose-6-phosphate phosphatase chr5 25434040-25431777 F EGN_Mt100125 20111014	GO:0005992|trehalose biosynthetic process GO:0008152|metabolic process GO:0046686|response to cadmium ion	GO:0003824|catalytic activity GO:0004805|trehalose-phosphatase activity	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_05930	A	A1S	Potri.002G094600	Potri.002G094600(AS)	POPTR_0002s09520	sp|Q9C9S2|FB91_ARATH	F-box protein At1g78100 OS=Arabidopsis thaliana GN=At1g78100 PE=1 SV=1	AT1G78100.1	| Symbols: | F-box family protein | chr1:29387907-29388911 FORWARD LENGTH=334	LOC_Os05g41130.1	protein|OsFBX168 - F-box domain containing protein, expressed	NA	NA	GO:0009733|response to auxin stimulus GO:0009736|cytokinin mediated signaling pathway GO:0009741|response to brassinosteroid stimulus GO:0010540|basipetal auxin transport GO:0010541|acropetal auxin transport	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05931	A	A1S	Potri.002G094700	Potri.002G094700(AS)	POPTR_0002s09530	NA	NA	AT1G78110.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22230.1); Has 5452 Blast hits to 3541 proteins in 289 species: Archae - 4; Bacteria - 165; Metazoa - 1756; Fungi - 532; Plants - 205; Viruses - 141; Other Eukaryotes - 2649 (source: NCBI BLink). | chr1:29391879-29392907 FORWARD LENGTH=342	LOC_Os02g51720.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_05932	A	A1S	Potri.002G094800	Potri.002G094800(AS)	POPTR_0002s09540	sp|Q9SIN1|TTL3_ARATH	Inactive TPR repeat-containing thioredoxin TTL3 OS=Arabidopsis thaliana GN=TTL3 PE=1 SV=2	AT5G65160.1	| Symbols: TPR14 | tetratricopeptide repeat (TPR)-containing protein | chr5:26031457-26033668 REVERSE LENGTH=593	LOC_Os02g51730.1	protein|dnaJ homolog subfamily C member 7, putative, expressed	IMGA|Medtr5g063200.1	Small glutamine-rich tetratricopeptide repeat-containing protein chr5 25499833-25496222 E EGN_Mt100125 20111014	GO:0008150|biological_process	NA	NA
pt2_05933	A	A2S	Potri.002G094900	Potri.002G094900(AS) Potri.005G166100(DS)	POPTR_0002s09550	NA	NA	AT1G35830.1	| Symbols: | VQ motif-containing protein | chr1:13321214-13322122 REVERSE LENGTH=302	LOC_Os08g31660.1	protein|VQ domain containing protein, putative, expressed	IMGA|Medtr5g063310.1	VQ motif family protein expressed chr5 25547936-25546366 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05934	A	A1S	Potri.002G095000	Potri.002G095000(AS)	POPTR_0002s09560	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05935	A	A1S	Potri.002G095100	Potri.002G095100(AS)	POPTR_0002s09570	sp|Q8LBV4|Y1814_ARATH	Uncharacterized methyltransferase At1g78140, chloroplastic OS=Arabidopsis thaliana GN=At1g78140 PE=1 SV=1	AT1G78140.1	| Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr1:29401937-29403878 REVERSE LENGTH=355	LOC_Os08g31750.1	protein|methyltransferase, putative, expressed	NA	NA	GO:0008152|metabolic process	GO:0008168|methyltransferase activity	GO:0009507|chloroplast GO:0010287|plastoglobule
pt2_05936	A	A1S	Potri.002G095100	Potri.002G095100(AS)	POPTR_0002s09570	sp|Q8LBV4|Y1814_ARATH	Uncharacterized methyltransferase At1g78140, chloroplastic OS=Arabidopsis thaliana GN=At1g78140 PE=1 SV=1	AT1G78140.1	| Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr1:29401937-29403878 REVERSE LENGTH=355	LOC_Os08g31750.1	protein|methyltransferase, putative, expressed	NA	NA	GO:0008152|metabolic process	GO:0008168|methyltransferase activity	GO:0009507|chloroplast GO:0010287|plastoglobule
pt2_05937	A	A1S	Potri.002G095200	Potri.002G095200(AS)	POPTR_0002s09580	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05938	A	A1S	Potri.002G095300	Potri.002G095300(AS)	POPTR_0002s09590	NA	NA	AT1G35780.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78150.2); Has 145 Blast hits to 144 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:13277778-13280113 REVERSE LENGTH=286	LOC_Os02g36500.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05939	A	A1S	Potri.002G095400	Potri.002G095400(AS)	POPTR_0002s09600	sp|Q9C9R6|PUM7_ARATH	Putative pumilio homolog 7, chloroplastic OS=Arabidopsis thaliana GN=APUM7 PE=3 SV=2	AT1G78160.1	| Symbols: APUM7, PUM7 | pumilio 7 | chr1:29407900-29410184 FORWARD LENGTH=650	LOC_Os12g31000.1	protein|pumilio-family RNA binding repeat domain containing protein, expressed	IMGA|Medtr5g063650.1	Pumilio domain-containing protein chr5 25669388-25673667 I EGN_Mt100125 20111014	NA	GO:0003723|RNA binding GO:0003729|mRNA binding	GO:0005737|cytoplasm GO:0009507|chloroplast
pt2_05940	A	A1S	Potri.002G095600	Potri.002G095600(AS)	POPTR_0002s09610	sp|Q9SYT0|ANXD1_ARATH	Annexin D1 OS=Arabidopsis thaliana GN=ANN1 PE=1 SV=1	AT1G35720.1	| Symbols: ANNAT1, OXY5, ATOXY5 | annexin 1 | chr1:13225304-13226939 FORWARD LENGTH=317	LOC_Os06g11800.1	protein|annexin, putative, expressed	IMGA|Medtr5g063670.1	Annexin chr5 25680904-25678394 F EGN_Mt100125 20111014	GO:0006333|chromatin assembly or disassembly GO:0006816|calcium ion transport GO:0006970|response to osmotic stress GO:0006979|response to oxidative stress GO:0007030|Golgi organization GO:0009269|response to desiccation GO:0009408|response to heat GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009651|response to salt stress GO:0009737|response to abscisic acid stimulus GO:0016126|sterol biosynthetic process GO:0019344|cysteine biosynthetic process GO:0030003|cellular cation homeostasis GO:0046686|response to cadmium ion GO:0070588|calcium ion transmembrane transport GO:0070838|divalent metal ion transport GO:0071435|potassium ion export	GO:0004601|peroxidase activity GO:0005507|copper ion binding GO:0005509|calcium ion binding GO:0005524|ATP binding GO:0005544|calcium-dependent phospholipid binding GO:0008270|zinc ion binding GO:0042803|protein homodimerization activity	GO:0005618|cell wall GO:0005634|nucleus GO:0005739|mitochondrion GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005829|cytosol GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009579|thylakoid GO:0016020|membrane GO:0048046|apoplast
pt2_05941	A	A1S	Potri.002G095700	Potri.002G095700(AS)	POPTR_0002s09620	sp|Q8VZG8|Y4885_ARATH	Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=1 SV=3	AT4G08850.1	| Symbols: | Leucine-rich repeat receptor-like protein kinase family protein | chr4:5636693-5640496 REVERSE LENGTH=1045	LOC_Os10g02990.1	protein|leucine-rich repeat receptor-like protein kinase 1, putative, expressed	IMGA|Medtr1g039110.1	Leucine-rich repeat receptor-like protein kinase chr1 10456672-10453160 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006857|oligopeptide transport GO:0006995|cellular response to nitrogen starvation GO:0009627|systemic acquired resistance GO:0031347|regulation of defense response	GO:0004672|protein kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane
pt2_05942	G	G1	NA	NA	POPTR_0002s09625	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05943	A	A1S	Potri.002G095800	Potri.002G095800(AS)	POPTR_0002s09630	sp|P30352|SRSF2_CHICK	Serine/arginine-rich splicing factor 2 OS=Gallus gallus GN=SRSF2 PE=2 SV=1	AT5G64200.2	| Symbols: ATSC35, SC35, At-SC35 | ortholog of human splicing factor SC35 | chr5:25681849-25683553 REVERSE LENGTH=303	LOC_Os08g37960.2	protein|RNA recognition motif containing protein, expressed	IMGA|Medtr5g070450.2	"Splicing factor, arginine/serine-rich" chr5 28858307-28855600 F EGN_Mt100125 20111014	GO:0000398|mRNA splicing, via spliceosome GO:0008380|RNA splicing GO:0030422|production of siRNA involved in RNA interference GO:0035196|production of miRNAs involved in gene silencing by miRNA	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005634|nucleus GO:0005829|cytosol GO:0016020|membrane GO:0016607|nuclear speck
pt2_05944	A	A1S	Potri.002G095900	Potri.002G095900(AS)	POPTR_0002s09640	sp|Q93Y91|STP5_ARATH	Sugar transport protein 5 OS=Arabidopsis thaliana GN=STP5 PE=2 SV=1	AT1G34580.1	| Symbols: | Major facilitator superfamily protein | chr1:12660631-12663553 FORWARD LENGTH=506	LOC_Os04g38220.1	protein|transporter family protein, putative, expressed	IMGA|contig_75878_1.1	"Solute carrier family 2, facilitated glucose transporter member" contig_75878 3264-673 H PREDN 20111014	GO:0006810|transport GO:0055085|transmembrane transport	GO:0005215|transporter activity GO:0005351|sugar:hydrogen symporter activity GO:0015144|carbohydrate transmembrane transporter activity GO:0022857|transmembrane transporter activity GO:0022891|substrate-specific transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_05945	A	A1S	Potri.002G096000	Potri.002G096000(AS)	POPTR_0002s09650	sp|Q93Y91|STP5_ARATH	Sugar transport protein 5 OS=Arabidopsis thaliana GN=STP5 PE=2 SV=1	AT1G34580.1	| Symbols: | Major facilitator superfamily protein | chr1:12660631-12663553 FORWARD LENGTH=506	LOC_Os04g37980.1	protein|transporter family protein, putative, expressed	IMGA|contig_75878_1.1	"Solute carrier family 2, facilitated glucose transporter member" contig_75878 3264-673 H PREDN 20111014	GO:0006810|transport GO:0055085|transmembrane transport	GO:0005215|transporter activity GO:0005351|sugar:hydrogen symporter activity GO:0015144|carbohydrate transmembrane transporter activity GO:0022857|transmembrane transporter activity GO:0022891|substrate-specific transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_05946	A	A1S	Potri.002G096100	Potri.002G096100(AS)	POPTR_0002s09660	NA	NA	AT1G78170.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22250.1); Has 66 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:29414160-29414941 FORWARD LENGTH=221	LOC_Os03g09120.1	protein|expressed protein	IMGA|Medtr5g063720.1	WW domain containing protein expressed chr5 25705188-25706170 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05947	A	A1S	Potri.002G096200	Potri.002G096200(AS)	POPTR_0002s09670	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_05948	A	A2S	Potri.002G096400	Potri.002G096400(AS) Potri.002G096300(AS)	POPTR_0002s09680	sp|Q9LME2|SYCP1_ARATH	Synaptonemal complex protein 1 OS=Arabidopsis thaliana GN=ZYP1A PE=2 SV=1	AT1G22260.1	| Symbols: ZYP1a, ZYP1 | Myosin heavy chain-related protein | chr1:7860160-7865142 REVERSE LENGTH=871	LOC_Os04g37960.1	protein|synaptonemal complex protein 2, putative, expressed	IMGA|Medtr5g063730.1	Synaptonemal complex protein chr5 25720890-25712282 H EGN_Mt100125 20111014	GO:0007129|synapsis GO:0007131|reciprocal meiotic recombination	NA	GO:0000795|synaptonemal complex GO:0005634|nucleus
pt2_05949	A	A1S	Potri.002G096500	Potri.002G096500(AS)	POPTR_0002s09690	NA	NA	AT1G34630.1	| Symbols: | BEST Arabidopsis thaliana protein match is: Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein (TAIR:AT5G51150.1); Has 323 Blast hits to 315 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 95; Fungi - 110; Plants - 73; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). | chr1:12685317-12687435 FORWARD LENGTH=481	LOC_Os03g09090.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_05950	A	A1S	Potri.002G096600	Potri.002G096600(AS)	POPTR_0002s09700	sp|Q8LFJ5|T112A_ARATH	TRM112-like protein At1g22270 OS=Arabidopsis thaliana GN=At1g22270 PE=2 SV=1	AT1G22270.1	| Symbols: | Trm112p-like protein | chr1:7865548-7865922 FORWARD LENGTH=124	LOC_Os07g43020.1	protein|TRM112, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_05951	A	A1S	Potri.002G096700	Potri.002G096700(AS)	POPTR_0002s09710	NA	NA	AT1G34640.1	| Symbols: | peptidases | chr1:12687706-12688427 REVERSE LENGTH=110	NA	NA	NA	NA	GO:0006465|signal peptide processing GO:0006499|N-terminal protein myristoylation	GO:0008233|peptidase activity	GO:0005739|mitochondrion GO:0005787|signal peptidase complex GO:0016021|integral to membrane
pt2_05952	A	A1S	Potri.002G096800	Potri.002G096800(AS)	POPTR_0002s09720	sp|Q8GWP0|MYB39_ARATH	Transcription factor MYB39 OS=Arabidopsis thaliana GN=MYB39 PE=2 SV=1	AT1G34670.1	| Symbols: AtMYB93, MYB93 | myb domain protein 93 | chr1:12709128-12710423 FORWARD LENGTH=365	LOC_Os08g37970.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr5g029840.1	Myb-like transcription factor chr5 12304553-12305846 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009751|response to salicylic acid stimulus	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_05953	A	A1S	Potri.002G096900	Potri.002G096900(AS)	POPTR_0002s09730	sp|Q43125|CRY1_ARATH	Cryptochrome-1 OS=Arabidopsis thaliana GN=CRY1 PE=1 SV=2	AT4G08920.1	| Symbols: CRY1, BLU1, HY4, OOP2, ATCRY1 | cryptochrome 1 | chr4:5724260-5726905 FORWARD LENGTH=681	LOC_Os04g37920.3	protein|FAD binding domain of DNA photolyase domain containing protein, expressed	IMGA|Medtr5g063920.1	Cryptochrome chr5 25801253-25806579 F EGN_Mt100125 20111014	GO:0006281|DNA repair GO:0007623|circadian rhythm GO:0009414|response to water deprivation GO:0009583|detection of light stimulus GO:0009637|response to blue light GO:0009640|photomorphogenesis GO:0009785|blue light signaling pathway GO:0010075|regulation of meristem growth GO:0010155|regulation of proton transport GO:0010343|singlet oxygen-mediated programmed cell death GO:0010617|circadian regulation of calcium ion oscillation GO:0046283|anthocyanin-containing compound metabolic process GO:0046777|protein autophosphorylation GO:0051510|regulation of unidimensional cell growth GO:0055114|oxidation-reduction process	GO:0003913|DNA photolyase activity GO:0004672|protein kinase activity GO:0005515|protein binding GO:0005524|ATP binding GO:0009882|blue light photoreceptor activity GO:0042802|identical protein binding GO:0042803|protein homodimerization activity	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_05954	A	A1S	Potri.002G097000	Potri.002G097000(AS)	POPTR_0002s09740	sp|P08995|NO26_SOYBN	Nodulin-26 OS=Glycine max PE=1 SV=2	AT4G18910.1	| Symbols: NIP1;2, NLM2, ATNLM2 | NOD26-like intrinsic protein 1;2 | chr4:10366211-10368179 FORWARD LENGTH=294	LOC_Os02g13870.1	protein|aquaporin protein, putative, expressed	IMGA|Medtr5g063930.1	Aquaporin NIP1-1 chr5 25809278-25807323 E EGN_Mt100125 20111014	GO:0006810|transport GO:0006833|water transport GO:0055085|transmembrane transport	GO:0005215|transporter activity GO:0015250|water channel activity	GO:0005737|cytoplasm GO:0016020|membrane GO:0016021|integral to membrane
pt2_05955	A	A1S	Potri.002G097200	Potri.002G097200(AS)	POPTR_0002s09750	sp|Q9S9Z7|P2C10_ARATH	Probable protein phosphatase 2C 10 OS=Arabidopsis thaliana GN=At1g34750 PE=1 SV=1	AT1G34750.1	| Symbols: | Protein phosphatase 2C family protein | chr1:12736386-12737727 REVERSE LENGTH=282	LOC_Os04g37904.1	protein|protein phosphatase 2C, putative, expressed	IMGA|Medtr5g063940.1	hypothetical protein chr5 25819289-25822814 F EGN_Mt100125 20111014	GO:0002237|response to molecule of bacterial origin GO:0009627|systemic acquired resistance GO:0031347|regulation of defense response	GO:0003824|catalytic activity GO:0004722|protein serine/threonine phosphatase activity	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_05956	A	A1S	Potri.002G097200	Potri.002G097200(AS)	POPTR_0002s09750	sp|Q9S9Z7|P2C10_ARATH	Probable protein phosphatase 2C 10 OS=Arabidopsis thaliana GN=At1g34750 PE=1 SV=1	AT1G34750.1	| Symbols: | Protein phosphatase 2C family protein | chr1:12736386-12737727 REVERSE LENGTH=282	LOC_Os04g37904.1	protein|protein phosphatase 2C, putative, expressed	IMGA|Medtr5g063940.1	hypothetical protein chr5 25819289-25822814 F EGN_Mt100125 20111014	GO:0002237|response to molecule of bacterial origin GO:0009627|systemic acquired resistance GO:0031347|regulation of defense response	GO:0003824|catalytic activity GO:0004722|protein serine/threonine phosphatase activity	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_05957	A	A1S	Potri.002G097400	Potri.002G097400(AS)	POPTR_0002s09760	sp|Q1LZ86|ABHD6_BOVIN	Monoacylglycerol lipase ABHD6 OS=Bos taurus GN=ABHD6 PE=2 SV=1	AT1G78210.1	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr1:29422820-29424294 REVERSE LENGTH=314	LOC_Os03g27110.1	protein|hydrolase protein, putative, expressed	IMGA|Medtr5g064040.1	Leucine-rich repeat-containing protein chr5 25855744-25864821 E EGN_Mt100125 20111014	NA	GO:0003824|catalytic activity GO:0016787|hydrolase activity	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_05958	A	A2S	Potri.002G097500	Potri.002G097500(AS) Potri.005G164500(DS)	POPTR_0002s09770	sp|P93212|14337_SOLLC	14-3-3 protein 7 OS=Solanum lycopersicum GN=TFT7 PE=2 SV=2	AT1G26480.1	| Symbols: GRF12, GF14 IOTA | general regulatory factor 12 | chr1:9156573-9157845 REVERSE LENGTH=268	LOC_Os08g33370.1	protein|14-3-3 protein, putative, expressed	IMGA|Medtr5g044160.1	14-3-3-like protein GF14 iota chr5 18998222-19001446 F EGN_Mt100125 20111014	NA	GO:0019904|protein domain specific binding GO:0045309|protein phosphorylated amino acid binding	GO:0005737|cytoplasm
pt2_05959	A	A1S	Potri.002G097600	Potri.002G097600(AS)	POPTR_0002s09780	sp|Q9SA00|APRL4_ARATH	5'-adenylylsulfate reductase-like 4 OS=Arabidopsis thaliana GN=APRL4 PE=2 SV=1	AT1G34780.1	| Symbols: ATAPRL4, APRL4 | APR-like 4 | chr1:12748835-12750124 REVERSE LENGTH=310	LOC_Os02g51850.2	protein|OsAPRL3 adenosine 5'-phosphosulfate reductase-like OsAPRL3, expressed	NA	NA	GO:0045454|cell redox homeostasis	NA	GO:0005576|extracellular region
pt2_05960	A	A2S	Potri.002G097700	Potri.002G097700(AS) Potri.005G164100(DS)	POPTR_0002s09790	sp|Q9LME6|MBD8_ARATH	Methyl-CpG-binding domain-containing protein 8 OS=Arabidopsis thaliana GN=MBD8 PE=2 SV=1	AT1G22310.1	| Symbols: MBD8, ATMBD8 | methyl-CPG-binding domain 8 | chr1:7881714-7883418 REVERSE LENGTH=425	LOC_Os08g37920.2	protein|ZOS8-09 - C2H2 zinc finger protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003677|DNA binding GO:0008327|methyl-CpG binding	GO:0005634|nucleus
pt2_05961	A	A1S	Potri.002G097800	Potri.002G097800(AS)	POPTR_0002s09800	sp|Q9D2H9|DAAF1_MOUSE	Dynein assembly factor 1, axonemal OS=Mus musculus GN=Dnaaf1 PE=2 SV=1	AT1G78230.1	| Symbols: | Outer arm dynein light chain 1 protein | chr1:29430226-29432516 FORWARD LENGTH=681	LOC_Os03g09070.1	protein|leucine rich repeat domain containing protein, putative, expressed	IMGA|contig_74913_1.1	Leucine Rich Repeat family protein expressed contig_74913 758-3759 E PREDN 20111014	GO:0008150|biological_process	NA	GO:0005576|extracellular region GO:0005773|vacuole
pt2_05962	A	A1A	Potri.002G097800	Potri.002G097800(AA)	POPTR_0002s09810	sp|Q9D2H9|DAAF1_MOUSE	Dynein assembly factor 1, axonemal OS=Mus musculus GN=Dnaaf1 PE=2 SV=1	AT1G78230.1	| Symbols: | Outer arm dynein light chain 1 protein | chr1:29430226-29432516 FORWARD LENGTH=681	LOC_Os03g09070.1	protein|leucine rich repeat domain containing protein, putative, expressed	IMGA|contig_74913_1.1	Leucine Rich Repeat family protein expressed contig_74913 758-3759 E PREDN 20111014	GO:0008150|biological_process	NA	GO:0005576|extracellular region GO:0005773|vacuole
pt2_05963	A	A2S	Potri.002G098000	Potri.002G098000(AS) Potri.005G163900(BS)	POPTR_0002s09820	sp|Q9C9Q8|PMTT_ARATH	Probable pectin methyltransferase QUA2 OS=Arabidopsis thaliana GN=QUA2 PE=1 SV=2	AT1G78240.2	| Symbols: TSD2, QUA2 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr1:29433173-29435815 REVERSE LENGTH=684	LOC_Os02g51860.1	protein|dehydration response related protein, putative, expressed	IMGA|Medtr5g064080.1	hypothetical protein chr5 25875854-25870688 F EGN_Mt100125 20111014	GO:0009735|response to cytokinin stimulus GO:0010289|homogalacturonan biosynthetic process GO:0048364|root development GO:0048367|shoot development	GO:0008168|methyltransferase activity	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_05964	A	A1S	Potri.002G098100	Potri.002G098100(AS)	POPTR_0002s09830	sp|Q9H0Z9|RBM38_HUMAN	RNA-binding protein 38 OS=Homo sapiens GN=RBM38 PE=1 SV=2	AT1G78260.1	| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr1:29447317-29450181 FORWARD LENGTH=287	LOC_Os01g65550.2	protein|RNA recognition motif containing protein, putative, expressed	IMGA|Medtr5g064120.1	RNA-binding protein chr5 25902597-25908008 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05965	A	A1S	Potri.002G098200	Potri.002G098200(AS)	POPTR_0002s09840	sp|Q8VWG3|TT1_ARATH	Protein TRANSPARENT TESTA 1 OS=Arabidopsis thaliana GN=TT1 PE=2 SV=1	AT1G34790.1	| Symbols: TT1, WIP1 | C2H2 and C2HC zinc fingers superfamily protein | chr1:12763953-12765489 FORWARD LENGTH=303	LOC_Os06g40960.1	protein|ZOS6-05 - C2H2 zinc finger protein, expressed	IMGA|Medtr5g054090.1	Zinc finger-like protein chr5 21755121-21752391 H EGN_Mt100125 20111014	GO:0009813|flavonoid biosynthetic process	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_05966	A	A1S	Potri.002G098300	Potri.002G098300(AS)	POPTR_0002s09850	sp|Q9ZWJ3|U85A2_ARATH	UDP-glycosyltransferase 85A2 OS=Arabidopsis thaliana GN=UGT85A2 PE=2 SV=1	AT1G22360.1	| Symbols: AtUGT85A2, UGT85A2 | UDP-glucosyl transferase 85A2 | chr1:7895068-7897527 REVERSE LENGTH=481	LOC_Os02g51930.1	protein|cytokinin-O-glucosyltransferase 2, putative, expressed	IMGA|Medtr5g064240.1	Cytokinin-O-glucosyltransferase chr5 25966031-25961072 F EGN_Mt100125 20111014	GO:0008152|metabolic process	GO:0008194|UDP-glycosyltransferase activity GO:0015020|glucuronosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05967	A	A1S	Potri.002G098400	Potri.002G098400(AS)	POPTR_0002s09860	sp|Q9ZWJ3|U85A2_ARATH	UDP-glycosyltransferase 85A2 OS=Arabidopsis thaliana GN=UGT85A2 PE=2 SV=1	AT1G22360.1	| Symbols: AtUGT85A2, UGT85A2 | UDP-glucosyl transferase 85A2 | chr1:7895068-7897527 REVERSE LENGTH=481	LOC_Os04g37820.1	protein|cytokinin-O-glucosyltransferase 2, putative, expressed	IMGA|Medtr5g064240.1	Cytokinin-O-glucosyltransferase chr5 25966031-25961072 F EGN_Mt100125 20111014	GO:0008152|metabolic process	GO:0008194|UDP-glycosyltransferase activity GO:0015020|glucuronosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05968	R	R	NA	NA	POPTR_0002s09870	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05969	A	A1S	Potri.002G098600	Potri.002G098600(AS)	POPTR_0002s09880	NA	NA	AT4G08950.1	| Symbols: EXO | Phosphate-responsive 1 family protein | chr4:5740378-5741322 FORWARD LENGTH=314	LOC_Os02g52040.1	protein|phosphate-induced protein 1 conserved region domain containing protein, expressed	IMGA|contig_62049_1.1	Unknown protein contig_62049 1573-626 E PREDN 20111014	GO:0009741|response to brassinosteroid stimulus GO:0016126|sterol biosynthetic process	GO:0003674|molecular_function	GO:0005576|extracellular region GO:0005618|cell wall GO:0005794|Golgi apparatus GO:0009505|plant-type cell wall
pt2_05970	B	B1S	Potri.002G098700	Potri.002G098700(BS)	POPTR_0002s09890	NA	NA	AT4G08950.1	| Symbols: EXO | Phosphate-responsive 1 family protein | chr4:5740378-5741322 FORWARD LENGTH=314	LOC_Os02g52040.1	protein|phosphate-induced protein 1 conserved region domain containing protein, expressed	IMGA|contig_62049_1.1	Unknown protein contig_62049 1573-626 E PREDN 20111014	GO:0009741|response to brassinosteroid stimulus GO:0016126|sterol biosynthetic process	GO:0003674|molecular_function	GO:0005576|extracellular region GO:0005618|cell wall GO:0005794|Golgi apparatus GO:0009505|plant-type cell wall
pt2_05971	A	A1S	Potri.002G098800	Potri.002G098800(AS)	POPTR_0002s09900	NA	NA	AT4G08950.1	| Symbols: EXO | Phosphate-responsive 1 family protein | chr4:5740378-5741322 FORWARD LENGTH=314	LOC_Os02g52040.1	protein|phosphate-induced protein 1 conserved region domain containing protein, expressed	IMGA|contig_62049_1.1	Unknown protein contig_62049 1573-626 E PREDN 20111014	GO:0009741|response to brassinosteroid stimulus GO:0016126|sterol biosynthetic process	GO:0003674|molecular_function	GO:0005576|extracellular region GO:0005618|cell wall GO:0005794|Golgi apparatus GO:0009505|plant-type cell wall
pt2_05972	B	B2S	Potri.005G163000	Potri.005G163000(BS) Potri.002G098900(DS)	POPTR_0002s09910	NA	NA	AT5G64260.1	| Symbols: EXL2 | EXORDIUM like 2 | chr5:25703980-25704897 FORWARD LENGTH=305	LOC_Os02g52040.1	protein|phosphate-induced protein 1 conserved region domain containing protein, expressed	IMGA|contig_62049_1.1	Unknown protein contig_62049 1573-626 E PREDN 20111014	GO:0008150|biological_process GO:0046685|response to arsenic-containing substance	GO:0003674|molecular_function	GO:0005618|cell wall GO:0005794|Golgi apparatus GO:0005829|cytosol GO:0009505|plant-type cell wall GO:0009506|plasmodesma GO:0009507|chloroplast
pt2_05973	A	A2S	Potri.002G099000	Potri.002G099000(AS) Potri.005G162900(DS)	POPTR_0002s09920	sp|Q28717|PTPA_RABIT	Serine/threonine-protein phosphatase 2A activator OS=Oryctolagus cuniculus GN=PPP2R4 PE=1 SV=1	AT4G08960.1	| Symbols: | phosphotyrosyl phosphatase activator (PTPA) family protein | chr4:5746326-5747994 FORWARD LENGTH=392	LOC_Os06g11640.1	protein|serine/threonine-protein phosphatase 2A activator 2, putative, expressed	NA	NA	NA	GO:0019211|phosphatase activator activity	GO:0005737|cytoplasm
pt2_05974	A	A1S	Potri.002G099100	Potri.002G099100(AS)	POPTR_0002s09930	sp|Q9ZPE4|FBW2_ARATH	F-box protein FBW2 OS=Arabidopsis thaliana GN=FBW2 PE=1 SV=1	AT4G08980.5	| Symbols: FBW2 | F-BOX WITH WD-40 2 | chr4:5758993-5760108 FORWARD LENGTH=317	LOC_Os06g11630.1	protein|OsFBX192 - F-box domain containing protein, expressed	IMGA|Medtr5g064480.1	F-box protein FBW2 chr5 26091100-26092400 F EGN_Mt100125 20111014	GO:0006511|ubiquitin-dependent protein catabolic process GO:0009737|response to abscisic acid stimulus GO:0010608|posttranscriptional regulation of gene expression GO:0010629|negative regulation of gene expression	GO:0004842|ubiquitin-protein ligase activity GO:0005515|protein binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05975	A	A1S	Potri.002G099100	Potri.002G099100(AS)	POPTR_0002s09940	sp|Q9ZPE4|FBW2_ARATH	F-box protein FBW2 OS=Arabidopsis thaliana GN=FBW2 PE=1 SV=1	AT4G08980.5	| Symbols: FBW2 | F-BOX WITH WD-40 2 | chr4:5758993-5760108 FORWARD LENGTH=317	LOC_Os06g11630.1	protein|OsFBX192 - F-box domain containing protein, expressed	IMGA|Medtr5g064480.1	F-box protein FBW2 chr5 26091100-26092400 F EGN_Mt100125 20111014	GO:0006511|ubiquitin-dependent protein catabolic process GO:0009737|response to abscisic acid stimulus GO:0010608|posttranscriptional regulation of gene expression GO:0010629|negative regulation of gene expression	GO:0004842|ubiquitin-protein ligase activity GO:0005515|protein binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05976	A	A1S	Potri.002G099200	Potri.002G099200(AS)	POPTR_0002s09950	sp|P27608|AROF_TOBAC	Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Nicotiana tabacum GN=DHAPS-1 PE=2 SV=1	AT1G22410.1	| Symbols: | Class-II DAHP synthetase family protein | chr1:7912120-7914742 FORWARD LENGTH=527	LOC_Os07g42960.1	protein|phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplast precursor, putative, expressed	IMGA|Medtr5g064500.1	2-dehydro-3-deoxyphosphoheptonate aldolase (3-deoxy-d-arabino-heptulosonate 7-phosphate synthase) chr5 26109513-26113523 F EGN_Mt100125 20111014	GO:0009073|aromatic amino acid family biosynthetic process GO:0009611|response to wounding GO:0009627|systemic acquired resistance GO:0009805|coumarin biosynthetic process GO:0034976|response to endoplasmic reticulum stress	GO:0003849|3-deoxy-7-phosphoheptulonate synthase activity	GO:0009507|chloroplast GO:0009536|plastid GO:0016020|membrane
pt2_05977	A	A1S	Potri.002G099400	Potri.002G099400(AS)	POPTR_0002s09960	sp|Q9M9E8|FB92_ARATH	F-box protein At1g78280 OS=Arabidopsis thaliana GN=At1g78280 PE=2 SV=3	AT1G78280.1	| Symbols: | transferases, transferring glycosyl groups | chr1:29452823-29457118 FORWARD LENGTH=943	LOC_Os03g27250.1	protein|OsFBO14 - F-box and other domain containing protein, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0007166|cell surface receptor signaling pathway GO:0010200|response to chitin GO:0052542|defense response by callose deposition	GO:0016757|transferase activity, transferring glycosyl groups GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus GO:0005829|cytosol
pt2_05978	A	A1S	Potri.002G099500	Potri.002G099500(AS)	POPTR_0002s09970	sp|Q9M3V8|RS6_ASPOF	40S ribosomal protein S6 OS=Asparagus officinalis GN=rps6 PE=2 SV=1	AT5G10360.1	| Symbols: EMB3010, RPS6B | Ribosomal protein S6e | chr5:3258734-3260142 REVERSE LENGTH=249	LOC_Os03g27260.1	protein|40S ribosomal protein S6, putative, expressed	NA	NA	GO:0006364|rRNA processing GO:0006412|translation GO:0009793|embryo development ending in seed dormancy GO:0040007|growth	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005634|nucleus GO:0005829|cytosol GO:0005840|ribosome GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0022626|cytosolic ribosome GO:0022627|cytosolic small ribosomal subunit
pt2_05979	A	A1S	Potri.002G099600	Potri.002G099600(AS)	POPTR_0002s09980	sp|Q9FZ95|PUP3_ARATH	Purine permease 3 OS=Arabidopsis thaliana GN=PUP3 PE=2 SV=1	AT1G28220.1	| Symbols: ATPUP3, PUP3 | purine permease 3 | chr1:9860303-9861434 REVERSE LENGTH=351	LOC_Os09g29239.1	protein|purine permease, putative, expressed	IMGA|Medtr5g065080.1	Purine permease chr5 26371801-26373742 H EGN_Mt100125 20111014	GO:0006863|purine nucleobase transport GO:0015931|nucleobase-containing compound transport	GO:0005345|purine nucleobase transmembrane transporter activity	GO:0009507|chloroplast GO:0016020|membrane
pt2_05980	A	A1S	Potri.002G099700	Potri.002G099700(AS)	POPTR_0002s09990	sp|A2YNT8|SAPK2_ORYSI	Serine/threonine-protein kinase SAPK2 OS=Oryza sativa subsp. indica GN=SAPK2 PE=2 SV=2	AT1G78290.3	| Symbols: | Protein kinase superfamily protein | chr1:29457457-29458909 REVERSE LENGTH=343	LOC_Os07g42940.1	protein|CAMK_CAMK_like.7 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	IMGA|Medtr5g064540.1	Serine-threonine protein kinase chr5 26127716-26123453 F EGN_Mt100125 20111014	GO:0005985|sucrose metabolic process GO:0006468|protein phosphorylation GO:0006636|unsaturated fatty acid biosynthetic process GO:0006970|response to osmotic stress GO:0009414|response to water deprivation GO:0009651|response to salt stress GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0010119|regulation of stomatal movement GO:0019432|triglyceride biosynthetic process GO:0040007|growth GO:0042742|defense response to bacterium GO:0042744|hydrogen peroxide catabolic process GO:0048366|leaf development GO:0080167|response to karrikin GO:2000377|regulation of reactive oxygen species metabolic process	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005515|protein binding GO:0005524|ATP binding GO:0009931|calcium-dependent protein serine/threonine kinase activity GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol
pt2_05981	A	A2S	Potri.002G099800	Potri.002G099800(AS) Potri.005G162400(BS)	POPTR_0002s10000	sp|P46266|1433_PEA	14-3-3-like protein OS=Pisum sativum PE=2 SV=1	AT1G78300.1	| Symbols: GRF2, 14-3-3OMEGA, GF14 OMEGA | general regulatory factor 2 | chr1:29461883-29463052 FORWARD LENGTH=259	LOC_Os08g33370.1	protein|14-3-3 protein, putative, expressed	IMGA|Medtr5g064580.1	14-3-3 protein chr5 26144532-26146862 F EGN_Mt100125 20111014	GO:0009742|brassinosteroid mediated signaling pathway	GO:0019904|protein domain specific binding GO:0045309|protein phosphorylated amino acid binding	GO:0005737|cytoplasm GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0005829|cytosol GO:0005886|plasma membrane
pt2_05982	A	A1S	Potri.002G099900	Potri.002G099900(AS)	POPTR_0002s10010	NA	NA	AT1G78310.1	| Symbols: | VQ motif-containing protein | chr1:29464003-29464938 REVERSE LENGTH=311	NA	NA	NA	NA	NA	NA	GO:0005634|nucleus
pt2_05983	A	A1S	Potri.002G100000	Potri.002G100000(AS)	POPTR_0002s10020	sp|Q9S7L9|CX6B1_ARATH	Cytochrome c oxidase subunit 6b-1 OS=Arabidopsis thaliana GN=COX6B-1 PE=2 SV=1	AT1G22450.1	| Symbols: COX6B, ATCOX6B2 | cytochrome C oxidase 6B | chr1:7925447-7926918 FORWARD LENGTH=191	LOC_Os07g42910.1	protein|cytochrome c oxidase subunit, putative, expressed	IMGA|Medtr5g064600.1	Subunit 6b of cytochrome c oxidase chr5 26155103-26160394 F EGN_Mt100125 20111014	GO:0009651|response to salt stress GO:0009853|photorespiration GO:0055114|oxidation-reduction process	GO:0004129|cytochrome-c oxidase activity GO:0005507|copper ion binding	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009579|thylakoid
pt2_05984	C	C2S	Potri.002G100100	Potri.002G100100(CS) Potri.002G100200(CS)	sp|Q9FJL4|BH078_ARATH	Transcription factor bHLH78 OS=Arabidopsis thaliana GN=BHLH78 PE=2 SV=1	AT5G48560.1	| Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr5:19684160-19686871 FORWARD LENGTH=498	LOC_Os09g32510.5	protein|BHLH transcription factor, putative, expressed	IMGA|Medtr5g037250.1	BHLH transcription factor chr5 15845151-15842462 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0016132|brassinosteroid biosynthetic process	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_05985	B	B1S	Potri.002G100300	Potri.002G100300(BS)	POPTR_0002s10040	sp|Q73KB2|SYS_TREDE	Serine--tRNA ligase OS=Treponema denticola (strain ATCC 35405 / CIP 103919 / DSM 14222) GN=serS PE=3 SV=1	AT1G11870.3	| Symbols: ATSRS, SRS | Seryl-tRNA synthetase | chr1:4003895-4006150 FORWARD LENGTH=402	LOC_Os11g39670.1	protein|seryl-tRNA synthetase, putative, expressed	NA	NA	GO:0000096|sulfur amino acid metabolic process GO:0006364|rRNA processing GO:0006399|tRNA metabolic process GO:0006418|tRNA aminoacylation for protein translation GO:0006434|seryl-tRNA aminoacylation GO:0007005|mitochondrion organization GO:0008652|cellular amino acid biosynthetic process GO:0009069|serine family amino acid metabolic process GO:0009658|chloroplast organization GO:0009793|embryo development ending in seed dormancy GO:0009902|chloroplast relocation GO:0009965|leaf morphogenesis GO:0010027|thylakoid membrane organization GO:0010207|photosystem II assembly GO:0010228|vegetative to reproductive phase transition of meristem GO:0016226|iron-sulfur cluster assembly GO:0030154|cell differentiation GO:0034660|ncRNA metabolic process GO:0035304|regulation of protein dephosphorylation GO:0042545|cell wall modification GO:0042793|transcription from plastid promoter GO:0043039|tRNA aminoacylation GO:0045893|positive regulation of transcription, DNA-dependent GO:0048481|ovule development	GO:0000166|nucleotide binding GO:0004812|aminoacyl-tRNA ligase activity GO:0004828|serine-tRNA ligase activity GO:0005524|ATP binding	GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_05986	A	A1S	Potri.002G100400	Potri.002G100400(AS)	POPTR_0002s10050	sp|Q8W486|Y1491_ARATH	DUF246 domain-containing protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=1 SV=1	AT1G22460.1	| Symbols: | O-fucosyltransferase family protein | chr1:7927530-7930351 REVERSE LENGTH=565	LOC_Os06g11600.3	protein|growth regulator related protein, putative, expressed	IMGA|Medtr5g064620.1	DUF246 domain-containing protein chr5 26173950-26167423 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0016757|transferase activity, transferring glycosyl groups	GO:0005794|Golgi apparatus
pt2_05987	A	A1S	Potri.002G100500	Potri.002G100500(AS)	POPTR_0002s10060	NA	NA	NA	NA	NA	NA	NA	NA	GO:0009693|ethylene biosynthetic process GO:0010224|response to UV-B	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_05988	A	A1S	Potri.002G100600	Potri.002G100600(AS)	POPTR_0002s10080	sp|Q940J1|ATB16_ARATH	Homeobox-leucine zipper protein ATHB-16 OS=Arabidopsis thaliana GN=ATHB-16 PE=2 SV=2	AT4G40060.1	| Symbols: ATHB16, ATHB-16, HB16 | homeobox protein 16 | chr4:18571682-18572774 REVERSE LENGTH=294	LOC_Os08g37580.1	protein|homeobox associated leucine zipper, putative, expressed	IMGA|contig_53935_2.1	Unknown protein contig_53935 3120-583 F PREDN 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009637|response to blue light GO:0030308|negative regulation of cell growth GO:0045893|positive regulation of transcription, DNA-dependent GO:0048510|regulation of timing of transition from vegetative to reproductive phase GO:0048573|photoperiodism, flowering	GO:0000976|transcription regulatory region sequence-specific DNA binding GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_05989	A	A1S	Potri.002G100700	Potri.002G100700(AS)	POPTR_0002s10090	sp|Q9BXR0|TGT_HUMAN	Queuine tRNA-ribosyltransferase OS=Homo sapiens GN=QTRT1 PE=1 SV=3	NA	NA	LOC_Os09g29420.1	protein|queuine tRNA-ribosyltransferase, putative, expressed	IMGA|Medtr5g099370.1	Queuine tRNA-ribosyltransferase chr5 42534310-42539685 H EGN_Mt100125 20111014	NA	NA	NA
pt2_05990	A	A1S	Potri.002G100700	Potri.002G100700(AS)	POPTR_0002s10090	sp|Q9BXR0|TGT_HUMAN	Queuine tRNA-ribosyltransferase OS=Homo sapiens GN=QTRT1 PE=1 SV=3	NA	NA	LOC_Os09g29420.1	protein|queuine tRNA-ribosyltransferase, putative, expressed	IMGA|Medtr5g099370.1	Queuine tRNA-ribosyltransferase chr5 42534310-42539685 H EGN_Mt100125 20111014	NA	NA	NA
pt2_05991	A	A1S	Potri.002G100700	Potri.002G100700(AS)	POPTR_0002s10090	sp|Q9BXR0|TGT_HUMAN	Queuine tRNA-ribosyltransferase OS=Homo sapiens GN=QTRT1 PE=1 SV=3	NA	NA	LOC_Os09g29420.1	protein|queuine tRNA-ribosyltransferase, putative, expressed	IMGA|Medtr5g099370.1	Queuine tRNA-ribosyltransferase chr5 42534310-42539685 H EGN_Mt100125 20111014	NA	NA	NA
pt2_05992	A	A1S	Potri.002G100800	Potri.002G100800(AS)	POPTR_0002s10100	sp|Q6TEP1|F91A1_DANRE	Protein FAM91A1 OS=Danio rerio GN=fam91a1 PE=2 SV=2	AT1G35220.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 313 Blast hits to 185 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 200; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). | chr1:12909293-12913916 FORWARD LENGTH=1005	LOC_Os01g19760.1	protein|expressed protein	IMGA|Medtr5g085880.1	Protein FAM91A1 chr5 36110447-36103972 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_05993	A	A1S	Potri.002G100900	Potri.002G100900(AS)	POPTR_0002s10110	sp|Q9M0S5|ISOA3_ARATH	Isoamylase 3, chloroplastic OS=Arabidopsis thaliana GN=ISA3 PE=1 SV=2	AT4G09020.1	| Symbols: ATISA3, ISA3 | isoamylase 3 | chr4:5784099-5788839 FORWARD LENGTH=764	LOC_Os09g29404.1	protein|glycogen operon protein glgX, putative, expressed	NA	NA	GO:0000272|polysaccharide catabolic process GO:0005975|carbohydrate metabolic process GO:0005982|starch metabolic process GO:0005983|starch catabolic process GO:0009664|plant-type cell wall organization GO:0019252|starch biosynthetic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0004556|alpha-amylase activity GO:0019156|isoamylase activity GO:0043169|cation binding	GO:0009507|chloroplast GO:0009569|chloroplast starch grain GO:0009570|chloroplast stroma
pt2_05994	A	A1S	Potri.002G101000	Potri.002G101000(AS)	POPTR_0002s10120	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05995	A	A1S	Potri.002G101100	Potri.002G101100(AS)	POPTR_0002s10130	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05996	G	G1	NA	NA	POPTR_0002s10140	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05997	B	B2S	Potri.002G101300	Potri.002G101300(BS) Potri.002G101200(BS)	POPTR_0002s10150	sp|Q41001|BCP_PEA	Blue copper protein OS=Pisum sativum PE=2 SV=1	AT1G72230.1	| Symbols: | Cupredoxin superfamily protein | chr1:27188287-27189093 FORWARD LENGTH=181	LOC_Os06g11490.1	protein|plastocyanin-like domain containing protein, putative, expressed	IMGA|Medtr5g006040.1	Early nodulin-like protein chr5 502223-501280 F EGN_Mt100125 20111014	GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process	GO:0005507|copper ion binding GO:0009055|electron carrier activity	GO:0005886|plasma membrane GO:0031225|anchored to membrane
pt2_05998	G	G1	NA	NA	POPTR_0002s10160	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_05999	A	A2S	Potri.002G101300	Potri.002G101300(AS) Potri.002G101200(DS)	POPTR_0002s10170	sp|Q41001|BCP_PEA	Blue copper protein OS=Pisum sativum PE=2 SV=1	AT1G72230.1	| Symbols: | Cupredoxin superfamily protein | chr1:27188287-27189093 FORWARD LENGTH=181	LOC_Os06g11490.1	protein|plastocyanin-like domain containing protein, putative, expressed	IMGA|Medtr5g006040.1	Early nodulin-like protein chr5 502223-501280 F EGN_Mt100125 20111014	GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process	GO:0005507|copper ion binding GO:0009055|electron carrier activity	GO:0005886|plasma membrane GO:0031225|anchored to membrane
pt2_06000	A	A1S	Potri.002G101400	Potri.002G101400(AS)	POPTR_0002s10180	NA	NA	AT4G09060.1	| Symbols: | unknown protein; LOCATED IN: membrane; EXPRESSED IN: leaf; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G14680.1); Has 8168 Blast hits to 6036 proteins in 601 species: Archae - 151; Bacteria - 570; Metazoa - 4684; Fungi - 544; Plants - 345; Viruses - 91; Other Eukaryotes - 1783 (source: NCBI BLink). | chr4:5797781-5800253 REVERSE LENGTH=341	LOC_Os02g58470.1	protein|expressed protein	IMGA|Medtr5g064800.1	hypothetical protein chr5 26239694-26230934 E EGN_Mt100125 20111014	NA	NA	GO:0005737|cytoplasm GO:0016020|membrane
pt2_06001	A	A1S	Potri.002G101500	Potri.002G101500(AS)	POPTR_0002s10190	NA	NA	NA	NA	NA	NA	IMGA|Medtr5g064840.2	hypothetical protein chr5 26262914-26265044 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_06002	A	A1S	Potri.002G101500	Potri.002G101500(AS)	POPTR_0002s10190	NA	NA	NA	NA	NA	NA	IMGA|Medtr5g064840.2	hypothetical protein chr5 26262914-26265044 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_06003	A	A1S	Potri.002G101500	Potri.002G101500(AS)	POPTR_0002s10190	NA	NA	NA	NA	NA	NA	IMGA|Medtr5g064840.2	hypothetical protein chr5 26262914-26265044 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_06004	A	A1S	Potri.002G101600	Potri.002G101600(AS)	POPTR_0002s10200	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_06005	B	B1S	Potri.002G101700	Potri.002G101700(BS)	POPTR_0002s10210	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06006	A	A1S	Potri.002G101800	Potri.002G101800(AS)	POPTR_0002s10220	sp|Q8LFY8|ATL54_ARATH	RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2 SV=2	AT1G72220.1	| Symbols: | RING/U-box superfamily protein | chr1:27184388-27185629 REVERSE LENGTH=413	LOC_Os02g46600.1	protein|RING-H2 finger protein ATL5G, putative, expressed	IMGA|Medtr5g064890.1	RING-H2 finger protein ATL1O chr5 26287066-26288801 E EGN_Mt100125 20111014	GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_06007	A	A1S	Potri.002G101900	Potri.002G101900(AS)	POPTR_0002s10230	sp|Q9C7T4|BH096_ARATH	Transcription factor bHLH96 OS=Arabidopsis thaliana GN=BHLH96 PE=2 SV=1	AT1G72210.1	| Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr1:27180066-27182268 FORWARD LENGTH=320	LOC_Os10g23050.1	protein|helix-loop-helix DNA-binding protein, putative, expressed	IMGA|Medtr5g064950.1	Transcription factor bHLH96 chr5 26320865-26316567 E EGN_Mt100125 20111014	NA	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_06008	A	A1S	Potri.002G102000	Potri.002G102000(AS)	POPTR_0002s10240	sp|Q9LYT3|TT12_ARATH	Protein TRANSPARENT TESTA 12 OS=Arabidopsis thaliana GN=TT12 PE=2 SV=1	AT5G65380.1	| Symbols: | MATE efflux family protein | chr5:26123241-26126352 REVERSE LENGTH=486	LOC_Os03g08900.1	protein|MATE efflux family protein, putative, expressed	IMGA|Medtr5g032720.1	Protein TRANSPARENT TESTA chr5 13665189-13669780 E EGN_Mt100125 20111014	GO:0006855|drug transmembrane transport GO:0009835|fruit ripening GO:0055085|transmembrane transport	GO:0005215|transporter activity GO:0015238|drug transmembrane transporter activity GO:0015297|antiporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_06009	A	A1S	Potri.002G102100	Potri.002G102100(AS)	POPTR_0002s10250	sp|Q9LYT3|TT12_ARATH	Protein TRANSPARENT TESTA 12 OS=Arabidopsis thaliana GN=TT12 PE=2 SV=1	AT5G65380.1	| Symbols: | MATE efflux family protein | chr5:26123241-26126352 REVERSE LENGTH=486	LOC_Os03g08900.1	protein|MATE efflux family protein, putative, expressed	IMGA|Medtr5g032720.1	Protein TRANSPARENT TESTA chr5 13665189-13669780 E EGN_Mt100125 20111014	GO:0006855|drug transmembrane transport GO:0009835|fruit ripening GO:0055085|transmembrane transport	GO:0005215|transporter activity GO:0015238|drug transmembrane transporter activity GO:0015297|antiporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_06010	G	G1	NA	NA	POPTR_0002s10260	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06011	A	A1S	Potri.002G102300	Potri.002G102300(AS)	POPTR_0002s10270	NA	NA	AT4G33590.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G33600.1); Has 126 Blast hits to 126 proteins in 35 species: Archae - 0; Bacteria - 12; Metazoa - 0; Fungi - 21; Plants - 62; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). | chr4:16142585-16143985 REVERSE LENGTH=466	LOC_Os09g29160.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_06012	A	A1S	Potri.002G102400	Potri.002G102400(AS)	POPTR_0002s10280	sp|Q8VXX9|BETL1_ARATH	Bet1-like protein At4g14600 OS=Arabidopsis thaliana GN=At4g14600 PE=2 SV=1	AT4G14600.1	| Symbols: | Target SNARE coiled-coil domain protein | chr4:8376562-8378078 FORWARD LENGTH=137	LOC_Os03g08870.1	protein|expressed protein	IMGA|Medtr5g065550.1	Bet1-like protein chr5 26589452-26587395 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005794|Golgi apparatus GO:0005886|plasma membrane
pt2_06013	A	A1S	Potri.002G102500	Potri.002G102500(AS)	POPTR_0002s10290	sp|Q7QBJ0|U483_ANOGA	UPF0483 protein AGAP003155 OS=Anopheles gambiae GN=AGAP003155 PE=3 SV=3	AT4G24380.1	| Symbols: | INVOLVED IN: 10-formyltetrahydrofolate biosynthetic process, folic acid and derivative biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G65400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:12612554-12613586 FORWARD LENGTH=234	LOC_Os04g37710.1	protein|serine hydrolase domain containing protein, expressed	IMGA|Medtr5g065580.1	"Hydrolase, putative" chr5 26593477-26594768 F EGN_Mt100125 20111014	GO:0009257|10-formyltetrahydrofolate biosynthetic process GO:0009396|folic acid-containing compound biosynthetic process GO:0009611|response to wounding GO:0009620|response to fungus GO:0009693|ethylene biosynthetic process GO:0009695|jasmonic acid biosynthetic process GO:0009753|response to jasmonic acid stimulus GO:0015824|proline transport	NA	GO:0009507|chloroplast
pt2_06014	A	A1S	Potri.002G102600	Potri.002G102600(AS)	POPTR_0002s10300	sp|Q474I9|PDXH_CUPPJ	Pyridoxine/pyridoxamine 5'-phosphate oxidase OS=Cupriavidus pinatubonensis (strain JMP134 / LMG 1197) GN=pdxH PE=3 SV=1	AT5G49970.1	| Symbols: ATPPOX, PDX3, PPOX | pyridoxin (pyrodoxamine) 5'-phosphate oxidase | chr5:20329213-20332900 FORWARD LENGTH=530	LOC_Os10g23120.1	protein|pyridoxamine 5'-phosphate oxidase family protein, putative, expressed	NA	NA	GO:0008615|pyridoxine biosynthetic process GO:0019761|glucosinolate biosynthetic process GO:0042817|pyridoxal metabolic process GO:0055114|oxidation-reduction process	GO:0004733|pyridoxamine-phosphate oxidase activity GO:0010181|FMN binding GO:0016491|oxidoreductase activity GO:0016638|oxidoreductase activity, acting on the CH-NH2 group of donors	GO:0005576|extracellular region GO:0005829|cytosol GO:0009507|chloroplast
pt2_06015	A	A1S	Potri.002G102700	Potri.002G102700(AS)	POPTR_0002s10310	sp|Q9LTX2|TIR1L_ARATH	Transport inhibitor response 1-like protein OS=Arabidopsis thaliana GN=At5g49980 PE=1 SV=1	AT5G49980.1	| Symbols: AFB5 | auxin F-box protein 5 | chr5:20334420-20336531 REVERSE LENGTH=619	LOC_Os02g52230.1	protein|coronatine-insensitive protein 1, putative, expressed	IMGA|Medtr5g065490.1	F-box family protein chr5 26557031-26559858 E EGN_Mt100125 20111014	GO:0002237|response to molecule of bacterial origin GO:0007165|signal transduction GO:0010103|stomatal complex morphogenesis GO:0048443|stamen development	GO:0004842|ubiquitin-protein ligase activity	GO:0005634|nucleus
pt2_06016	A	A1S	Potri.002G102800	Potri.002G102800(AS)	POPTR_0002s10320	sp|Q9SE96|GEML1_ARATH	GEM-like protein 1 OS=Arabidopsis thaliana GN=FIP1 PE=1 SV=1	AT1G28200.1	| Symbols: FIP1 | FH interacting protein 1 | chr1:9850395-9852300 REVERSE LENGTH=259	LOC_Os03g08860.1	protein|GRAM domain containing protein, expressed	IMGA|Medtr1g115130.1	GEM-like protein chr1 33325322-33326339 E EGN_Mt100125 20111014	GO:0006623|protein targeting to vacuole GO:0006944|cellular membrane fusion GO:0008150|biological_process GO:0016192|vesicle-mediated transport GO:0016197|endosomal transport	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_06017	A	A1S	Potri.002G102900	Potri.002G102900(AS)	POPTR_0002s10330	sp|Q9SB61|Y4466_ARATH	ZF-HD homeobox protein At4g24660 OS=Arabidopsis thaliana GN=At4g24660 PE=1 SV=1	AT4G24660.1	| Symbols: ATHB22, MEE68, HB22, ZHD2 | homeobox protein 22 | chr4:12724851-12725513 REVERSE LENGTH=220	LOC_Os09g29130.1	protein|ZF-HD protein dimerisation region containing protein, expressed	IMGA|Medtr5g065440.1	Zinc finger-homeodomain protein chr5 26527523-26528329 E EGN_Mt100125 20111014	GO:0009686|gibberellin biosynthetic process GO:0009737|response to abscisic acid stimulus GO:0009740|gibberellic acid mediated signaling pathway GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0010162|seed dormancy process GO:0048608|reproductive structure development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_06018	A	A1S	Potri.002G103100	Potri.002G103100(AS)	POPTR_0002s10340	sp|Q8N5D0|WDTC1_HUMAN	WD and tetratricopeptide repeats protein 1 OS=Homo sapiens GN=WDTC1 PE=1 SV=2	AT5G10940.2	| Symbols: | transducin family protein / WD-40 repeat family protein | chr5:3448890-3454127 REVERSE LENGTH=754	LOC_Os03g08830.1	protein|WD domain, G-beta repeat domain containing protein, expressed	IMGA|Medtr5g050630.1	hypothetical protein chr5 20972672-20971939 F EGN_Mt100125 20111014	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0006346|methylation-dependent chromatin silencing GO:0007062|sister chromatid cohesion GO:0008150|biological_process GO:0009630|gravitropism GO:0010413|glucuronoxylan metabolic process GO:0016246|RNA interference GO:0031048|chromatin silencing by small RNA GO:0045132|meiotic chromosome segregation GO:0045492|xylan biosynthetic process	GO:0000166|nucleotide binding	GO:0005737|cytoplasm GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_06019	A	A1S	Potri.002G103300	Potri.002G103300(AS)	POPTR_0002s10350	sp|Q9FGB0|BH145_ARATH	Transcription factor bHLH145 OS=Arabidopsis thaliana GN=BHLH145 PE=2 SV=1	AT5G50010.1	| Symbols: | sequence-specific DNA binding transcription factors;transcription regulators | chr5:20349556-20350491 FORWARD LENGTH=311	LOC_Os03g27390.1	protein|CPuORF35 - conserved peptide uORF-containing transcript, expressed	IMGA|Medtr5g065670.1	Transcription factor bHLH143 chr5 26649181-26646704 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0048446|petal morphogenesis	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_06020	A	A1S	Potri.002G103400	Potri.002G103400(AS)	POPTR_0002s10360	NA	NA	AT5G50011.1	| Symbols: CPuORF37 | conserved peptide upstream open reading frame 37 | chr5:20349114-20349380 FORWARD LENGTH=51	NA	NA	IMGA|Medtr5g065670.1	Transcription factor bHLH143 chr5 26649181-26646704 E EGN_Mt100125 20111014	NA	NA	NA
pt2_06021	A	A1S	Potri.002G103500	Potri.002G103500(AS)	POPTR_0002s10370	sp|Q6YXH8|CCD41_ORYSJ	Cyclin-D4-1 OS=Oryza sativa subsp. japonica GN=CYCD4-1 PE=2 SV=2	AT2G22490.2	| Symbols: CYCD2;1 | Cyclin D2;1 | chr2:9554157-9555873 REVERSE LENGTH=362	LOC_Os09g29100.1	protein|cyclin, putative, expressed	IMGA|Medtr5g032550.1	Cyclin D2 chr5 13556615-13559060 E EGN_Mt100125 20111014	GO:0009744|response to sucrose stimulus GO:0010440|stomatal lineage progression GO:0042023|DNA endoreduplication GO:0045736|negative regulation of cyclin-dependent protein kinase activity GO:0051726|regulation of cell cycle	GO:0005515|protein binding GO:0016538|cyclin-dependent protein kinase regulator activity	GO:0005634|nucleus
pt2_06022	A	A1S	Potri.002G103600	Potri.002G103600(AS)	POPTR_0002s10380	sp|Q3E9F0|PP392_ARATH	Pentatricopeptide repeat-containing protein At5g18475 OS=Arabidopsis thaliana GN=At5g18475 PE=2 SV=1	AT5G18475.1	| Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr5:6129255-6130775 REVERSE LENGTH=506	LOC_Os02g26890.1	protein|PPR repeat containing protein, expressed	IMGA|Medtr5g090170.1	Auxin response factor chr5 38240367-38247794 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_06023	A	A1S	Potri.002G103700	Potri.002G103700(AS)	POPTR_0002s10390	sp|P93009|CUTA_ARATH	Protein CutA, chloroplastic OS=Arabidopsis thaliana GN=CUTA PE=1 SV=1	AT2G33740.2	| Symbols: CUTA | Nitrogen regulatory PII-like, alpha/beta | chr2:14269590-14271523 FORWARD LENGTH=182	LOC_Os03g08800.1	protein|CutA, chloroplast precursor, putative, expressed	NA	NA	GO:0010038|response to metal ion GO:0048573|photoperiodism, flowering	GO:0005507|copper ion binding	GO:0009507|chloroplast
pt2_06024	A	A1S	Potri.002G103700	Potri.002G103700(AS)	POPTR_0002s10390	sp|P93009|CUTA_ARATH	Protein CutA, chloroplastic OS=Arabidopsis thaliana GN=CUTA PE=1 SV=1	AT2G33740.2	| Symbols: CUTA | Nitrogen regulatory PII-like, alpha/beta | chr2:14269590-14271523 FORWARD LENGTH=182	LOC_Os03g08800.1	protein|CutA, chloroplast precursor, putative, expressed	NA	NA	GO:0010038|response to metal ion GO:0048573|photoperiodism, flowering	GO:0005507|copper ion binding	GO:0009507|chloroplast
pt2_06025	A	A1S	Potri.002G103700	Potri.002G103700(AS)	POPTR_0002s10390	sp|P93009|CUTA_ARATH	Protein CutA, chloroplastic OS=Arabidopsis thaliana GN=CUTA PE=1 SV=1	AT2G33740.2	| Symbols: CUTA | Nitrogen regulatory PII-like, alpha/beta | chr2:14269590-14271523 FORWARD LENGTH=182	LOC_Os03g08800.1	protein|CutA, chloroplast precursor, putative, expressed	NA	NA	GO:0010038|response to metal ion GO:0048573|photoperiodism, flowering	GO:0005507|copper ion binding	GO:0009507|chloroplast
pt2_06026	A	A1S	Potri.002G103800	Potri.002G103800(AS)	POPTR_0002s10400	sp|P48348|14338_ARATH	14-3-3-like protein GF14 kappa OS=Arabidopsis thaliana GN=GRF8 PE=2 SV=2	AT5G65430.1	| Symbols: GRF8, 14-3-3KAPPA, GF14 KAPPA | general regulatory factor 8 | chr5:26148546-26150255 REVERSE LENGTH=248	LOC_Os08g33370.1	protein|14-3-3 protein, putative, expressed	IMGA|Medtr5g064580.1	14-3-3 protein chr5 26144532-26146862 F EGN_Mt100125 20111014	GO:0009407|toxin catabolic process GO:0009742|brassinosteroid mediated signaling pathway	GO:0019904|protein domain specific binding GO:0045309|protein phosphorylated amino acid binding	GO:0005618|cell wall GO:0005634|nucleus GO:0005737|cytoplasm GO:0005886|plasma membrane GO:0009505|plant-type cell wall GO:0009507|chloroplast
pt2_06027	A	A1S	Potri.002G103900	Potri.002G103900(AS)	POPTR_0002s10410	sp|B2TLZ8|DNAJ_CLOBB	Chaperone protein DnaJ OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=dnaJ PE=3 SV=1	AT2G33735.1	| Symbols: | Chaperone DnaJ-domain superfamily protein | chr2:14268532-14269394 REVERSE LENGTH=119	LOC_Os02g52270.1	protein|heat shock protein DnaJ, putative, expressed	IMGA|Medtr5g065860.1	Chaperone protein dnaJ chr5 26740058-26736221 F EGN_Mt100125 20111014	GO:0006457|protein folding	GO:0031072|heat shock protein binding GO:0051082|unfolded protein binding	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_06028	A	A1S	Potri.002G104000	Potri.002G104000(AS)	POPTR_0002s10420	sp|B2J5F1|G6PI_NOSP7	Glucose-6-phosphate isomerase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=pgi PE=3 SV=1	AT4G24620.1	| Symbols: PGI1, PGI | phosphoglucose isomerase 1 | chr4:12708972-12712610 REVERSE LENGTH=613	LOC_Os09g29070.1	protein|glucose-6-phosphate isomerase, putative, expressed	IMGA|Medtr5g065880.1	Glucose-6-phosphate isomerase chr5 26744074-26753281 F EGN_Mt100125 20111014	GO:0000023|maltose metabolic process GO:0000272|polysaccharide catabolic process GO:0005982|starch metabolic process GO:0006094|gluconeogenesis GO:0006096|glycolysis GO:0009664|plant-type cell wall organization GO:0009911|positive regulation of flower development GO:0019252|starch biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0043085|positive regulation of catalytic activity	GO:0004347|glucose-6-phosphate isomerase activity	GO:0005829|cytosol GO:0009507|chloroplast GO:0009536|plastid GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope
pt2_06029	A	A1S	Potri.002G104100	Potri.002G104100(AS)	POPTR_0002s10430	NA	NA	AT4G24610.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65440.1). | chr4:12700837-12707899 REVERSE LENGTH=1155	LOC_Os02g52280.1	protein|expressed protein	IMGA|Medtr5g065900.1	hypothetical protein chr5 26762170-26769760 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_06030	A	A2S	Potri.002G104200	Potri.002G104200(AS) Potri.005G157500(DS)	POPTR_0002s10440	NA	NA	AT5G49710.3	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G24590.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr5:20195561-20197188 FORWARD LENGTH=235	LOC_Os02g54080.2	protein|expressed protein	IMGA|Medtr5g065930.1	hypothetical protein chr5 26781733-26777347 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_06031	A	A1S	Potri.002G104300	Potri.002G104300(AS)	POPTR_0002s10450	sp|Q5ZMM3|RHG15_CHICK	Rho GTPase-activating protein 15 OS=Gallus gallus GN=ARHGAP15 PE=2 SV=1	AT4G24580.1	| Symbols: REN1 | Rho GTPase activation protein (RhoGAP) with PH domain | chr4:12687879-12694248 REVERSE LENGTH=933	LOC_Os07g46450.1	protein|pleckstrin homology domain-containing protein, putative, expressed	IMGA|Medtr5g089490.1	Rho GTPase-activating protein chr5 37839960-37850612 E EGN_Mt100125 20111014	GO:0007165|signal transduction GO:0009827|plant-type cell wall modification GO:0009846|pollen germination GO:0009860|pollen tube growth GO:0009865|pollen tube adhesion GO:0032862|activation of Rho GTPase activity GO:0035024|negative regulation of Rho protein signal transduction GO:0048610|cellular process involved in reproduction GO:0048868|pollen tube development	GO:0005100|Rho GTPase activator activity GO:0005543|phospholipid binding GO:0017048|Rho GTPase binding GO:0035091|phosphatidylinositol binding	GO:0005622|intracellular GO:0005938|cell cortex GO:0045177|apical part of cell GO:0070382|exocytic vesicle GO:0090406|pollen tube
pt2_06032	A	A2S	Potri.002G104400	Potri.002G104400(AS) Potri.005G157300(DS)	POPTR_0002s10460	sp|Q54PY7|M2OM_DICDI	Probable mitochondrial 2-oxoglutarate/malate carrier protein OS=Dictyostelium discoideum GN=ucpC PE=3 SV=1	AT2G22500.1	| Symbols: UCP5, ATPUMP5, DIC1 | uncoupling protein 5 | chr2:9563531-9564472 REVERSE LENGTH=313	LOC_Os08g37370.2	protein|mitochondrial carrier protein, putative, expressed	IMGA|Medtr5g032420.1	Mitochondrial 2-oxoglutarate/malate carrier protein chr5 13491772-13493235 F EGN_Mt100125 20111014	GO:0006810|transport GO:0006839|mitochondrial transport GO:0010200|response to chitin GO:0015992|proton transport	GO:0005310|dicarboxylic acid transmembrane transporter activity GO:0017077|oxidative phosphorylation uncoupler activity	GO:0005739|mitochondrion GO:0005743|mitochondrial inner membrane GO:0031966|mitochondrial membrane
pt2_06033	A	A1S	Potri.002G104500	Potri.002G104500(AS)	POPTR_0002s10470	NA	NA	AT1G58120.1	| Symbols: | BEST Arabidopsis thaliana protein match is: methyltransferases (TAIR:AT5G01710.1); Has 93 Blast hits to 93 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:21520962-21522224 FORWARD LENGTH=420	LOC_Os07g42834.1	protein|retrotransposon protein, putative, unclassified, expressed	IMGA|Medtr5g065970.1	hypothetical protein chr5 26808811-26810604 E EGN_Mt100125 20111014	GO:0009860|pollen tube growth	NA	NA
pt2_06034	A	A1S	Potri.002G104600	Potri.002G104600(AS)	POPTR_0002s10480	sp|Q766C3|NEP1_NEPGR	Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1	AT1G09750.1	| Symbols: | Eukaryotic aspartyl protease family protein | chr1:3157541-3158960 FORWARD LENGTH=449	LOC_Os03g08790.1	protein|aspartic proteinase nepenthesin precursor, putative, expressed	IMGA|contig_51649_1.1	Aspartic proteinase nepenthesin-1 contig_51649 769-2767 E PREDN 20111014	GO:0006508|proteolysis	GO:0004190|aspartic-type endopeptidase activity	GO:0005576|extracellular region GO:0005618|cell wall GO:0009505|plant-type cell wall GO:0048046|apoplast
pt2_06035	A	A2S	Potri.002G104700	Potri.002G104700(AS) Potri.005G157100(DS)	POPTR_0002s10490	NA	NA	AT1G09740.1	| Symbols: | Adenine nucleotide alpha hydrolases-like superfamily protein | chr1:3154603-3155834 FORWARD LENGTH=171	LOC_Os02g52314.1	protein|BTB1 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain, expressed	IMGA|Medtr5g065980.2	Universal stress protein A-like protein chr5 26814223-26812489 F EGN_Mt100125 20111014	GO:0002238|response to molecule of fungal origin GO:0006826|iron ion transport GO:0006950|response to stress GO:0010106|cellular response to iron ion starvation GO:0010167|response to nitrate GO:0015706|nitrate transport	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_06036	A	A2S	Potri.002G104800	Potri.002G104800(AS) Potri.005G156900(DS)	POPTR_0002s10500	sp|Q9SB51|UBP16_ARATH	Ubiquitin carboxyl-terminal hydrolase 16 OS=Arabidopsis thaliana GN=UBP16 PE=2 SV=1	AT4G24560.1	| Symbols: UBP16 | ubiquitin-specific protease 16 | chr4:12679493-12684528 REVERSE LENGTH=1008	LOC_Os08g37350.1	protein|ubiquitin carboxyl-terminal hydrolase family protein, expressed	IMGA|Medtr5g066000.1	Ubiquitin carboxyl-terminal hydrolase chr5 26818749-26826548 E EGN_Mt100125 20111014	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0006486|protein glycosylation GO:0006487|protein N-linked glycosylation GO:0006511|ubiquitin-dependent protein catabolic process GO:0008283|cell proliferation GO:0009908|flower development GO:0048364|root development GO:0048366|leaf development GO:0048367|shoot development	GO:0004221|ubiquitin thiolesterase activity GO:0004843|ubiquitin-specific protease activity GO:0008270|zinc ion binding	GO:0005576|extracellular region
pt2_06037	A	A1S	Potri.002G104900	Potri.002G104900(AS)	POPTR_0002s10510	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06038	B	B1S	Potri.002G105000	Potri.002G105000(BS)	POPTR_0002s10520	sp|Q9S7C9|ESCA_ARATH	Putative DNA-binding protein ESCAROLA OS=Arabidopsis thaliana GN=ESC PE=2 SV=1	AT5G49700.1	| Symbols: | Predicted AT-hook DNA-binding family protein | chr5:20192599-20193429 FORWARD LENGTH=276	LOC_Os09g28930.1	protein|DNA binding protein, putative, expressed	IMGA|Medtr5g066020.1	hypothetical protein chr5 26836246-26835051 H EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005634|nucleus
pt2_06039	A	A1S	Potri.002G105100	Potri.002G105100(AS)	POPTR_0002s10530	sp|O00189|AP4M1_HUMAN	AP-4 complex subunit mu-1 OS=Homo sapiens GN=AP4M1 PE=1 SV=2	AT4G24550.2	| Symbols: | Clathrin adaptor complexes medium subunit family protein | chr4:12675873-12678903 FORWARD LENGTH=451	LOC_Os07g42810.1	protein|adaptor complexes medium subunit family domain containing protein, expressed	IMGA|Medtr5g066050.1	AP-4 complex subunit mu chr5 26851629-26843580 F EGN_Mt100125 20111014	GO:0006623|protein targeting to vacuole GO:0006810|transport GO:0006886|intracellular protein transport GO:0016192|vesicle-mediated transport	NA	GO:0005622|intracellular GO:0005634|nucleus GO:0005829|cytosol GO:0030125|clathrin vesicle coat
pt2_06040	A	A1S	Potri.002G105300	Potri.002G105300(AS)	POPTR_0002s10540	sp|Q9LET0|BH107_ARATH	Putative transcription factor bHLH107 OS=Arabidopsis thaliana GN=BHLH107 PE=2 SV=1	AT3G56770.1	| Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr3:21029202-21030618 REVERSE LENGTH=230	LOC_Os03g15440.1	protein|basic helix-loop-helix, putative, expressed	IMGA|Medtr5g066080.1	Transcription factor AIG1 chr5 26864609-26863755 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0010200|response to chitin	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus GO:0009941|chloroplast envelope
pt2_06041	A	A1S	Potri.002G105400	Potri.002G105400(AS)	POPTR_0002s10550	sp|Q8L8Q8|Y5486_ARATH	Uncharacterized protein At5g64816 OS=Arabidopsis thaliana GN=At5g64816 PE=2 SV=1	AT5G64816.2	| Symbols: | unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr5:25913487-25913879 FORWARD LENGTH=130	LOC_Os03g08710.2	protein|THION26 - Plant thionin family protein precursor, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_06042	A	A1S	Potri.002G105500	Potri.002G105500(AS)	POPTR_0002s10560	NA	NA	AT2G01710.1	| Symbols: | Chaperone DnaJ-domain superfamily protein | chr2:315836-316771 FORWARD LENGTH=311	LOC_Os03g27460.1	protein|heat shock protein DnaJ, putative, expressed	IMGA|Medtr5g066100.1	Curved DNA-binding protein chr5 26882815-26881679 E EGN_Mt100125 20111014	GO:0006457|protein folding GO:0007067|mitosis	GO:0031072|heat shock protein binding GO:0051082|unfolded protein binding	GO:0005575|cellular_component
pt2_06043	A	A3S	Potri.002G105600	Potri.002G105600(AS) Potri.005G155700(DS) Potri.005G155300(DS)	POPTR_0002s10570	sp|Q9FUY6|JOIN_SOLLC	MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1	AT2G22540.1	| Symbols: SVP, AGL22 | K-box region and MADS-box transcription factor family protein | chr2:9580417-9583603 FORWARD LENGTH=240	LOC_Os03g08754.2	protein|OsMADS47 - MADS-box family gene with MIKCc type-box, expressed	IMGA|Medtr5g032520.1	MADS-box transcription factor chr5 13532861-13539544 F EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0006355|regulation of transcription, DNA-dependent GO:0006612|protein targeting to membrane GO:0006944|cellular membrane fusion GO:0009266|response to temperature stimulus GO:0009556|microsporogenesis GO:0009617|response to bacterium GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009910|negative regulation of flower development GO:0009965|leaf morphogenesis GO:0010076|maintenance of floral meristem identity GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0010582|floral meristem determinacy GO:0030154|cell differentiation GO:0031348|negative regulation of defense response GO:0035304|regulation of protein dephosphorylation GO:0045892|negative regulation of transcription, DNA-dependent GO:0045893|positive regulation of transcription, DNA-dependent GO:0048438|floral whorl development GO:0048481|ovule development GO:0052543|callose deposition in cell wall	GO:0000900|translation repressor activity, nucleic acid binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_06044	A	A1S	Potri.002G105600	Potri.002G105600(AS)	POPTR_0002s10580	sp|Q9FUY6|JOIN_SOLLC	MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1	AT2G22540.1	| Symbols: SVP, AGL22 | K-box region and MADS-box transcription factor family protein | chr2:9580417-9583603 FORWARD LENGTH=240	LOC_Os03g08754.2	protein|OsMADS47 - MADS-box family gene with MIKCc type-box, expressed	IMGA|Medtr5g032520.1	MADS-box transcription factor chr5 13532861-13539544 F EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0006355|regulation of transcription, DNA-dependent GO:0006612|protein targeting to membrane GO:0006944|cellular membrane fusion GO:0009266|response to temperature stimulus GO:0009556|microsporogenesis GO:0009617|response to bacterium GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009910|negative regulation of flower development GO:0009965|leaf morphogenesis GO:0010076|maintenance of floral meristem identity GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0010582|floral meristem determinacy GO:0030154|cell differentiation GO:0031348|negative regulation of defense response GO:0035304|regulation of protein dephosphorylation GO:0045892|negative regulation of transcription, DNA-dependent GO:0045893|positive regulation of transcription, DNA-dependent GO:0048438|floral whorl development GO:0048481|ovule development GO:0052543|callose deposition in cell wall	GO:0000900|translation repressor activity, nucleic acid binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_06045	A	A1S	Potri.002G105700	Potri.002G105700(AS)	POPTR_0002s10590	sp|Q8L7S0|ULP2B_ARATH	Probable ubiquitin-like-specific protease 2B OS=Arabidopsis thaliana GN=ULP2B PE=2 SV=3	AT1G09730.2	| Symbols: | Cysteine proteinases superfamily protein | chr1:3148017-3154236 REVERSE LENGTH=931	LOC_Os05g11770.1	protein|ulp1 protease family protein, putative, expressed	IMGA|Medtr5g066230.1	Sentrin-specific protease chr5 26945808-26950745 I EGN_Mt100125 20111014	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0006508|proteolysis GO:0016926|protein desumoylation	GO:0008234|cysteine-type peptidase activity GO:0016929|SUMO-specific protease activity	GO:0005634|nucleus
pt2_06046	A	A2S	Potri.002G105800	Potri.002G105800(AS) Potri.002G105900(AA)	POPTR_0002s10600	sp|Q8W486|Y1491_ARATH	DUF246 domain-containing protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=1 SV=1	AT4G24530.1	| Symbols: | O-fucosyltransferase family protein | chr4:12667424-12669713 REVERSE LENGTH=519	LOC_Os09g24570.1	protein|growth regulator related protein, putative, expressed	IMGA|Medtr5g032100.1	DUF246 domain-containing protein chr5 13356818-13352509 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0016757|transferase activity, transferring glycosyl groups	GO:0005575|cellular_component GO:0005794|Golgi apparatus
pt2_06047	A	A1S	Potri.002G105900	Potri.002G105900(AS)	POPTR_0002s10610	sp|Q8L7W1|MSL3_ARATH	Mechanosensitive ion channel protein 3, chloroplastic OS=Arabidopsis thaliana GN=MSL3 PE=2 SV=1	AT1G58200.2	| Symbols: MSL3 | MSCS-like 3 | chr1:21548370-21552488 REVERSE LENGTH=678	LOC_Os03g31839.1	protein|transposon protein, putative, unclassified, expressed	IMGA|Medtr5g032090.1	MscS-Like mechanosensitive ion channel MSCL8 chr5 13344112-13351120 E EGN_Mt100125 20111014	GO:0006970|response to osmotic stress GO:0009657|plastid organization GO:0009694|jasmonic acid metabolic process GO:0009753|response to jasmonic acid stimulus GO:0010020|chloroplast fission GO:0055085|transmembrane transport	GO:0005216|ion channel activity	GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009526|plastid envelope GO:0016020|membrane
pt2_06048	A	A1S	Potri.002G106000	Potri.002G106000(AS)	POPTR_0002s10620	sp|Q91784|KIF4_XENLA	Chromosome-associated kinesin KIF4 OS=Xenopus laevis GN=kif4 PE=2 SV=1	AT5G60930.1	| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:24515398-24522511 REVERSE LENGTH=1294	LOC_Os09g02650.1	protein|kinesin motor domain containing protein, putative, expressed	IMGA|Medtr5g066320.1	Kinesin-like protein chr5 26974235-26983370 E EGN_Mt100125 20111014	GO:0008283|cell proliferation	GO:0003777|microtubule motor activity GO:0005524|ATP binding	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_06049	A	A1S	Potri.002G106100	Potri.002G106100(AS)	POPTR_0002s10630	sp|Q90640|KIF4_CHICK	Chromosome-associated kinesin KIF4 OS=Gallus gallus GN=KIF4 PE=2 SV=1	AT5G60930.1	| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:24515398-24522511 REVERSE LENGTH=1294	LOC_Os09g02650.1	protein|kinesin motor domain containing protein, putative, expressed	IMGA|Medtr5g066320.1	Kinesin-like protein chr5 26974235-26983370 E EGN_Mt100125 20111014	GO:0008283|cell proliferation	GO:0003777|microtubule motor activity GO:0005524|ATP binding	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_06050	A	A1S	Potri.002G106200	Potri.002G106200(AS)	POPTR_0002s10640	sp|Q6AR60|ARLY_DESPS	Argininosuccinate lyase OS=Desulfotalea psychrophila (strain LSv54 / DSM 12343) GN=argH PE=3 SV=1	AT5G10920.1	| Symbols: | L-Aspartase-like family protein | chr5:3441805-3443892 FORWARD LENGTH=517	LOC_Os03g19280.1	protein|argininosuccinate lyase, putative, expressed	NA	NA	GO:0006164|purine nucleotide biosynthetic process GO:0006526|arginine biosynthetic process GO:0009165|nucleotide biosynthetic process GO:0042450|arginine biosynthetic process via ornithine	GO:0003824|catalytic activity GO:0004056|argininosuccinate lyase activity	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_06051	A	A1S	Potri.002G106200	Potri.002G106200(AS)	POPTR_0002s10640	sp|Q6AR60|ARLY_DESPS	Argininosuccinate lyase OS=Desulfotalea psychrophila (strain LSv54 / DSM 12343) GN=argH PE=3 SV=1	AT5G10920.1	| Symbols: | L-Aspartase-like family protein | chr5:3441805-3443892 FORWARD LENGTH=517	LOC_Os03g19280.1	protein|argininosuccinate lyase, putative, expressed	NA	NA	GO:0006164|purine nucleotide biosynthetic process GO:0006526|arginine biosynthetic process GO:0009165|nucleotide biosynthetic process GO:0042450|arginine biosynthetic process via ornithine	GO:0003824|catalytic activity GO:0004056|argininosuccinate lyase activity	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_06052	A	A1S	Potri.002G106300	Potri.002G106300(AS)	POPTR_0002s10650	NA	NA	AT4G38060.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65480.1); Has 63 Blast hits to 63 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:17874002-17874379 REVERSE LENGTH=125	LOC_Os08g31940.1	protein|expressed protein	IMGA|Medtr5g066330.1	hypothetical protein chr5 26988865-26990562 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_06053	A	A1S	Potri.002G106400	Potri.002G106400(AS)	POPTR_0002s10660	NA	NA	AT1G58210.1	| Symbols: EMB1674 | kinase interacting family protein | chr1:21553621-21558056 FORWARD LENGTH=1246	LOC_Os01g61910.1	protein|KIP1, putative, expressed	IMGA|Medtr5g066340.1	hypothetical protein chr5 26993112-26997170 H EGN_Mt100125 20111014	GO:0009793|embryo development ending in seed dormancy GO:0009827|plant-type cell wall modification GO:0009860|pollen tube growth	GO:0003674|molecular_function	GO:0005884|actin filament GO:0005886|plasma membrane
pt2_06054	A	A1S	Potri.002G106500	Potri.002G106500(AS)	POPTR_0002s10670	NA	NA	AT1G09710.1	| Symbols: | Homeodomain-like superfamily protein | chr1:3141119-3144232 FORWARD LENGTH=610	LOC_Os02g34630.1	protein|MYB family transcription factor, putative, expressed	NA	NA	NA	GO:0003677|DNA binding	GO:0005634|nucleus
pt2_06055	A	A1S	Potri.002G106600	Potri.002G106600(AS)	POPTR_0002s10680	sp|P37116|NCPR_VIGRR	NADPH--cytochrome P450 reductase OS=Vigna radiata var. radiata PE=1 SV=1	AT4G24520.1	| Symbols: ATR1, AR1 | P450 reductase 1 | chr4:12663065-12667066 REVERSE LENGTH=692	LOC_Os09g38620.1	protein|NADPH reductase, putative, expressed	NA	NA	GO:0006888|ER to Golgi vesicle-mediated transport GO:0006979|response to oxidative stress GO:0009698|phenylpropanoid metabolic process GO:0009737|response to abscisic acid stimulus GO:0055114|oxidation-reduction process	GO:0003958|NADPH-hemoprotein reductase activity GO:0005506|iron ion binding GO:0010181|FMN binding GO:0016491|oxidoreductase activity	GO:0005783|endoplasmic reticulum GO:0005829|cytosol
pt2_06056	A	A1S	Potri.002G106700	Potri.002G106700(AS)	POPTR_0002s10690	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006091|generation of precursor metabolites and energy GO:0006351|transcription, DNA-dependent GO:0006354|DNA-dependent transcription, elongation GO:0015979|photosynthesis	GO:0003677|DNA binding GO:0003899|DNA-directed RNA polymerase activity	GO:0009295|nucleoid GO:0009507|chloroplast
pt2_06057	A	A1S	Potri.002G106800	Potri.002G106800(AS)	POPTR_0002s10700	sp|Q9LJM4|IKU2_ARATH	Receptor-like protein kinase HAIKU2 OS=Arabidopsis thaliana GN=IKU2 PE=1 SV=1	AT1G09970.1	| Symbols: LRR XI-23, RLK7 | Leucine-rich receptor-like protein kinase family protein | chr1:3252408-3255428 FORWARD LENGTH=976	LOC_Os12g43640.1	protein|receptor-like protein kinase HAIKU2 precursor, putative, expressed	IMGA|contig_56175_1.1	Receptor-like kinase contig_56175 3846-740 E PREDN 20111014	GO:0002237|response to molecule of bacterial origin GO:0006468|protein phosphorylation GO:0006499|N-terminal protein myristoylation GO:0006612|protein targeting to membrane GO:0006944|cellular membrane fusion GO:0006979|response to oxidative stress GO:0007165|signal transduction GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway GO:0009627|systemic acquired resistance GO:0009845|seed germination GO:0010103|stomatal complex morphogenesis GO:0010363|regulation of plant-type hypersensitive response GO:0031347|regulation of defense response GO:0043069|negative regulation of programmed cell death GO:0046777|protein autophosphorylation GO:0048443|stamen development	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane GO:0070825|micropyle
pt2_06058	C	C1S	Potri.002G106900	Potri.002G106900(CS)	sp|Q9FE59|SUC4_ARATH	Sucrose transport protein SUC4 OS=Arabidopsis thaliana GN=SUC4 PE=1 SV=2	AT1G09960.1	| Symbols: SUT4, ATSUT4, SUC4, ATSUC4 | sucrose transporter 4 | chr1:3244258-3246718 FORWARD LENGTH=510	LOC_Os12g44380.1	protein|sucrose transporter, putativ, expressed	IMGA|Medtr5g067470.1	Sucrose transport protein chr5 27540536-27531661 E EGN_Mt100125 20111014	GO:0015770|sucrose transport GO:0055085|transmembrane transport	GO:0005351|sugar:hydrogen symporter activity GO:0008506|sucrose:hydrogen symporter activity GO:0008515|sucrose transmembrane transporter activity GO:0015144|carbohydrate transmembrane transporter activity	GO:0005773|vacuole GO:0005886|plasma membrane GO:0005887|integral to plasma membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_06059	A	A1S	Potri.002G106900	Potri.002G106900(AS)	POPTR_0002s10750	sp|Q9FE59|SUC4_ARATH	Sucrose transport protein SUC4 OS=Arabidopsis thaliana GN=SUC4 PE=1 SV=2	AT1G09960.1	| Symbols: SUT4, ATSUT4, SUC4, ATSUC4 | sucrose transporter 4 | chr1:3244258-3246718 FORWARD LENGTH=510	LOC_Os12g44380.1	protein|sucrose transporter, putativ, expressed	IMGA|Medtr5g067470.1	Sucrose transport protein chr5 27540536-27531661 E EGN_Mt100125 20111014	GO:0015770|sucrose transport GO:0055085|transmembrane transport	GO:0005351|sugar:hydrogen symporter activity GO:0008506|sucrose:hydrogen symporter activity GO:0008515|sucrose transmembrane transporter activity GO:0015144|carbohydrate transmembrane transporter activity	GO:0005773|vacuole GO:0005886|plasma membrane GO:0005887|integral to plasma membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_06060	A	A1S	Potri.002G107100	Potri.002G107100(AS)	POPTR_0002s10760	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06061	A	A1S	Potri.002G107200	Potri.002G107200(AS)	POPTR_0002s10770	sp|Q8RWF5|MATE9_ARATH	MATE efflux family protein 9 OS=Arabidopsis thaliana GN=DTXL5 PE=2 SV=1	AT1G58340.1	| Symbols: ZF14 | MATE efflux family protein | chr1:21653162-21655117 FORWARD LENGTH=532	LOC_Os03g12790.1	protein|MATE efflux family protein, putative, expressed	IMGA|Medtr5g067460.1	Multidrug and toxin extrusion protein chr5 27526530-27524629 E EGN_Mt100125 20111014	GO:0003156|regulation of organ formation GO:0006810|transport GO:0006855|drug transmembrane transport GO:0009624|response to nematode GO:0055072|iron ion homeostasis GO:0055085|transmembrane transport	GO:0005215|transporter activity GO:0015238|drug transmembrane transporter activity GO:0015297|antiporter activity GO:0022857|transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane GO:0017119|Golgi transport complex GO:0043226|organelle
pt2_06062	B	B1S	Potri.001G071800	Potri.001G071800(BS)	POPTR_0002s10780	sp|Q9FJ17|DI197_ARATH	Protein DEHYDRATION-INDUCED 19 homolog 7 OS=Arabidopsis thaliana GN=DI19-7 PE=1 SV=2	AT5G49230.1	| Symbols: HRB1 | Drought-responsive family protein | chr5:19959048-19960422 REVERSE LENGTH=211	LOC_Os05g28980.2	protein|drought induced 19 protein, putative, expressed	IMGA|Medtr1g083780.1	Protein DEHYDRATION-INDUCED-like protein chr1 21809500-21806901 E EGN_Mt100125 20111014	GO:0009414|response to water deprivation GO:0009785|blue light signaling pathway GO:0010161|red light signaling pathway	NA	GO:0005634|nucleus
pt2_06063	A	A1S	Potri.002G107300	Potri.002G107300(AS)	POPTR_0002s10790	sp|Q9SXC4|IRX9H_ARATH	Probable beta-1,4-xylosyltransferase IRX9H OS=Arabidopsis thaliana GN=IRX9H PE=1 SV=2	AT1G27600.2	| Symbols: IRX9-L, I9H | Nucleotide-diphospho-sugar transferases superfamily protein | chr1:9604083-9605881 REVERSE LENGTH=394	LOC_Os10g13810.1	protein|glycosyltransferase family 43 protein, putative, expressed	IMGA|Medtr5g016600.1	Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase chr5 5714344-5710334 F EGN_Mt100125 20111014	GO:0006486|protein glycosylation GO:0010417|glucuronoxylan biosynthetic process GO:0010584|pollen exine formation	GO:0015018|galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups GO:0042285|xylosyltransferase activity	GO:0005794|Golgi apparatus GO:0016020|membrane
pt2_06064	A	A1S	Potri.002G107400	Potri.002G107400(AS)	POPTR_0002s10800	sp|Q92797|SYMPK_HUMAN	Symplekin OS=Homo sapiens GN=SYMPK PE=1 SV=2	AT1G27595.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Symplekin tight junction protein C-terminal (InterPro:IPR022075); BEST Arabidopsis thaliana protein match is: HEAT repeat-containing protein (TAIR:AT5G01400.1); Has 593 Blast hits to 297 proteins in 111 species: Archae - 0; Bacteria - 3; Metazoa - 139; Fungi - 49; Plants - 57; Viruses - 0; Other Eukaryotes - 345 (source: NCBI BLink). | chr1:9596475-9602917 FORWARD LENGTH=961	LOC_Os01g49940.1	protein|ESP4, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005737|cytoplasm
pt2_06065	C	C2S	Potri.002G107500	Potri.002G107500(CS) Potri.002G107400(CA)	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006355|regulation of transcription, DNA-dependent	GO:0003676|nucleic acid binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_06066	A	A1S	Potri.002G107400	Potri.002G107400(AS)	POPTR_0002s10820	sp|Q92797|SYMPK_HUMAN	Symplekin OS=Homo sapiens GN=SYMPK PE=1 SV=2	AT1G27595.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Symplekin tight junction protein C-terminal (InterPro:IPR022075); BEST Arabidopsis thaliana protein match is: HEAT repeat-containing protein (TAIR:AT5G01400.1); Has 593 Blast hits to 297 proteins in 111 species: Archae - 0; Bacteria - 3; Metazoa - 139; Fungi - 49; Plants - 57; Viruses - 0; Other Eukaryotes - 345 (source: NCBI BLink). | chr1:9596475-9602917 FORWARD LENGTH=961	LOC_Os01g49940.1	protein|ESP4, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005737|cytoplasm
pt2_06067	A	A1S	Potri.002G107400	Potri.002G107400(AS)	POPTR_0002s10830	sp|Q92797|SYMPK_HUMAN	Symplekin OS=Homo sapiens GN=SYMPK PE=1 SV=2	AT1G27595.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Symplekin tight junction protein C-terminal (InterPro:IPR022075); BEST Arabidopsis thaliana protein match is: HEAT repeat-containing protein (TAIR:AT5G01400.1); Has 593 Blast hits to 297 proteins in 111 species: Archae - 0; Bacteria - 3; Metazoa - 139; Fungi - 49; Plants - 57; Viruses - 0; Other Eukaryotes - 345 (source: NCBI BLink). | chr1:9596475-9602917 FORWARD LENGTH=961	LOC_Os01g49940.1	protein|ESP4, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005737|cytoplasm
pt2_06068	A	A1S	Potri.002G107600	Potri.002G107600(AS)	POPTR_0002s10840	sp|Q9SXC8|UFC1_ARATH	Ubiquitin-fold modifier-conjugating enzyme 1 OS=Arabidopsis thaliana GN=At1g27530 PE=2 SV=1	AT1G27530.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-fold modifier-conjugating enzyme 1 (InterPro:IPR014806); Has 269 Blast hits to 269 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 175; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). | chr1:9562761-9563887 REVERSE LENGTH=174	LOC_Os10g13800.1	protein|ufm1-conjugating enzyme 1, putative, expressed	NA	NA	GO:0006944|cellular membrane fusion GO:0008150|biological_process GO:0009407|toxin catabolic process GO:0048193|Golgi vesicle transport	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_06069	A	A1S	Potri.002G107700	Potri.002G107700(AS)	POPTR_0002s10850	sp|Q9T074|PCKA_ARATH	Phosphoenolpyruvate carboxykinase [ATP] OS=Arabidopsis thaliana GN=PCKA PE=1 SV=1	AT4G37870.1	| Symbols: PCK1, PEPCK | phosphoenolpyruvate carboxykinase 1 | chr4:17802974-17806332 REVERSE LENGTH=671	LOC_Os03g15050.2	protein|phosphoenolpyruvate carboxykinase, putative, expressed	IMGA|Medtr5g030620.1	Phosphoenolpyruvate carboxykinase chr5 12644464-12637395 F EGN_Mt100125 20111014	GO:0006094|gluconeogenesis GO:0009817|defense response to fungus, incompatible interaction GO:0016036|cellular response to phosphate starvation GO:0046686|response to cadmium ion	GO:0004611|phosphoenolpyruvate carboxykinase activity GO:0004612|phosphoenolpyruvate carboxykinase (ATP) activity GO:0005524|ATP binding GO:0017076|purine nucleotide binding	GO:0005634|nucleus GO:0005730|nucleolus GO:0005737|cytoplasm GO:0005829|cytosol GO:0016020|membrane
pt2_06070	A	A1S	Potri.002G107800	Potri.002G107800(AS)	POPTR_0002s10870	sp|P93111|HEM11_CUCSA	Glutamyl-tRNA reductase 1, chloroplastic OS=Cucumis sativus GN=HEMA1 PE=2 SV=1	AT1G58290.1	| Symbols: HEMA1 | Glutamyl-tRNA reductase family protein | chr1:21624028-21626051 REVERSE LENGTH=543	LOC_Os10g35840.1	protein|shikimate/quinate 5-dehydrogenase, putative, expressed	IMGA|Medtr5g067410.1	Glutamyl-tRNA reductase chr5 27498441-27495517 F EGN_Mt100125 20111014	GO:0000302|response to reactive oxygen species GO:0006779|porphyrin-containing compound biosynthetic process GO:0006783|heme biosynthetic process GO:0009416|response to light stimulus GO:0010039|response to iron ion GO:0015995|chlorophyll biosynthetic process GO:0033014|tetrapyrrole biosynthetic process GO:0055072|iron ion homeostasis GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0005515|protein binding GO:0008883|glutamyl-tRNA reductase activity GO:0050661|NADP binding	GO:0009507|chloroplast
pt2_06071	A	A1S	Potri.002G108000	Potri.002G108000(AS)	POPTR_0002s10880	sp|Q38827|IAA9_ARATH	Auxin-responsive protein IAA9 OS=Arabidopsis thaliana GN=IAA9 PE=1 SV=1	AT5G65670.1	| Symbols: IAA9 | indole-3-acetic acid inducible 9 | chr5:26254463-26256134 FORWARD LENGTH=338	LOC_Os12g40890.1	protein|OsIAA30 - Auxin-responsive Aux/IAA gene family member, expressed	IMGA|Medtr5g030710.1	Auxin-responsive protein (Aux/IAA) chr5 12699892-12694370 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009616|virus induced gene silencing GO:0009733|response to auxin stimulus GO:0009734|auxin mediated signaling pathway GO:0010050|vegetative phase change GO:0010583|response to cyclopentenone	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_06072	A	A1S	Potri.002G108100	Potri.002G108100(AS)	POPTR_0002s10890	sp|Q9LSK9|Y5566_ARATH	Uncharacterized protein At5g65660 OS=Arabidopsis thaliana GN=At5g65660 PE=1 SV=1	AT5G65660.1	| Symbols: | hydroxyproline-rich glycoprotein family protein | chr5:26245444-26246245 REVERSE LENGTH=136	NA	NA	IMGA|Medtr5g067320.1	hypothetical protein chr5 27458107-27459696 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_06073	A	A1S	Potri.002G108200	Potri.002G108200(AS)	POPTR_0002s10900	sp|A2T359|PSBB_ANGEV	Photosystem II CP47 chlorophyll apoprotein OS=Angiopteris evecta GN=psbB PE=3 SV=1	ATCG00680.1	| Symbols: PSBB | photosystem II reaction center protein B | chrC:72371-73897 FORWARD LENGTH=508	LOC_Os09g04680.1	protein|photosystem II P680 chlorophyll A apoprotein, putative, expressed	NA	NA	GO:0006091|generation of precursor metabolites and energy GO:0006354|DNA-dependent transcription, elongation GO:0009767|photosynthetic electron transport chain GO:0010207|photosystem II assembly GO:0015979|photosynthesis GO:0019684|photosynthesis, light reaction	GO:0016168|chlorophyll binding	GO:0009507|chloroplast GO:0009521|photosystem GO:0009523|photosystem II GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009539|photosystem II reaction center GO:0009579|thylakoid GO:0010287|plastoglobule GO:0016020|membrane
pt2_06074	A	A1S	Potri.002G108400	Potri.002G108400(AS)	POPTR_0002s10910	sp|Q9LSL1|BH093_ARATH	Transcription factor bHLH93 OS=Arabidopsis thaliana GN=BHLH93 PE=1 SV=1	AT5G65640.1	| Symbols: bHLH093 | beta HLH protein 93 | chr5:26237137-26238904 FORWARD LENGTH=351	LOC_Os03g04310.1	protein|BHLH transcription factor, putative, expressed	IMGA|Medtr5g030770.1	BHLH transcription factor chr5 12723960-12721713 F EGN_Mt100125 20111014	NA	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_06075	A	A1S	Potri.002G108500	Potri.002G108500(AS)	POPTR_0002s10920	NA	NA	AT5G64460.8	| Symbols: | Phosphoglycerate mutase family protein | chr5:25773009-25775104 REVERSE LENGTH=282	LOC_Os04g01230.2	protein|phosphoglycerate mutase, putative, expressed	IMGA|Medtr5g067240.1	Phosphoglycerate mutase-like protein chr5 27433579-27427129 F EGN_Mt100125 20111014	GO:0008150|biological_process GO:0009736|cytokinin mediated signaling pathway	GO:0003674|molecular_function	GO:0005576|extracellular region GO:0005829|cytosol GO:0009507|chloroplast
pt2_06076	B	B1S	Potri.002G108500	Potri.002G108500(BS)	POPTR_0002s10920	NA	NA	AT5G64460.8	| Symbols: | Phosphoglycerate mutase family protein | chr5:25773009-25775104 REVERSE LENGTH=282	LOC_Os04g01230.2	protein|phosphoglycerate mutase, putative, expressed	IMGA|Medtr5g067240.1	Phosphoglycerate mutase-like protein chr5 27433579-27427129 F EGN_Mt100125 20111014	GO:0008150|biological_process GO:0009736|cytokinin mediated signaling pathway	GO:0003674|molecular_function	GO:0005576|extracellular region GO:0005829|cytosol GO:0009507|chloroplast
pt2_06077	A	A1S	Potri.002G108500	Potri.002G108500(AS)	POPTR_0002s10920	NA	NA	AT5G64460.8	| Symbols: | Phosphoglycerate mutase family protein | chr5:25773009-25775104 REVERSE LENGTH=282	LOC_Os04g01230.2	protein|phosphoglycerate mutase, putative, expressed	IMGA|Medtr5g067240.1	Phosphoglycerate mutase-like protein chr5 27433579-27427129 F EGN_Mt100125 20111014	GO:0008150|biological_process GO:0009736|cytokinin mediated signaling pathway	GO:0003674|molecular_function	GO:0005576|extracellular region GO:0005829|cytosol GO:0009507|chloroplast
pt2_06078	A	A1S	Potri.002G108600	Potri.002G108600(AS)	POPTR_0002s10930	NA	NA	AT5G64460.8	| Symbols: | Phosphoglycerate mutase family protein | chr5:25773009-25775104 REVERSE LENGTH=282	LOC_Os04g01230.2	protein|phosphoglycerate mutase, putative, expressed	IMGA|Medtr5g067240.1	Phosphoglycerate mutase-like protein chr5 27433579-27427129 F EGN_Mt100125 20111014	GO:0008150|biological_process GO:0008152|metabolic process GO:0009736|cytokinin mediated signaling pathway	GO:0003674|molecular_function GO:0003824|catalytic activity	GO:0005576|extracellular region GO:0005737|cytoplasm GO:0005829|cytosol GO:0009507|chloroplast
pt2_06079	A	A1S	Potri.002G108600	Potri.002G108600(AS)	POPTR_0002s10930	NA	NA	AT5G64460.8	| Symbols: | Phosphoglycerate mutase family protein | chr5:25773009-25775104 REVERSE LENGTH=282	LOC_Os04g01230.2	protein|phosphoglycerate mutase, putative, expressed	IMGA|Medtr5g067240.1	Phosphoglycerate mutase-like protein chr5 27433579-27427129 F EGN_Mt100125 20111014	GO:0008150|biological_process GO:0008152|metabolic process GO:0009736|cytokinin mediated signaling pathway	GO:0003674|molecular_function GO:0003824|catalytic activity	GO:0005576|extracellular region GO:0005737|cytoplasm GO:0005829|cytosol GO:0009507|chloroplast
pt2_06080	A	A1S	Potri.002G108600	Potri.002G108600(AS)	POPTR_0002s10930	NA	NA	AT5G64460.8	| Symbols: | Phosphoglycerate mutase family protein | chr5:25773009-25775104 REVERSE LENGTH=282	LOC_Os04g01230.2	protein|phosphoglycerate mutase, putative, expressed	IMGA|Medtr5g067240.1	Phosphoglycerate mutase-like protein chr5 27433579-27427129 F EGN_Mt100125 20111014	GO:0008150|biological_process GO:0008152|metabolic process GO:0009736|cytokinin mediated signaling pathway	GO:0003674|molecular_function GO:0003824|catalytic activity	GO:0005576|extracellular region GO:0005737|cytoplasm GO:0005829|cytosol GO:0009507|chloroplast
pt2_06081	A	A1S	Potri.002G108600	Potri.002G108600(AS)	POPTR_0002s10930	NA	NA	AT5G64460.8	| Symbols: | Phosphoglycerate mutase family protein | chr5:25773009-25775104 REVERSE LENGTH=282	LOC_Os04g01230.2	protein|phosphoglycerate mutase, putative, expressed	IMGA|Medtr5g067240.1	Phosphoglycerate mutase-like protein chr5 27433579-27427129 F EGN_Mt100125 20111014	GO:0008150|biological_process GO:0008152|metabolic process GO:0009736|cytokinin mediated signaling pathway	GO:0003674|molecular_function GO:0003824|catalytic activity	GO:0005576|extracellular region GO:0005737|cytoplasm GO:0005829|cytosol GO:0009507|chloroplast
pt2_06082	A	A1S	Potri.002G108700	Potri.002G108700(AS)	POPTR_0002s10940	sp|Q4PJX1|ODR4_MOUSE	Protein odr-4 homolog OS=Mus musculus GN=Odr4 PE=2 SV=2	AT3G28670.1	| Symbols: | oxidoreductase, zinc-binding dehydrogenase family protein | chr3:10744183-10746983 FORWARD LENGTH=491	LOC_Os10g11110.1	protein|expressed protein	NA	NA	GO:0055114|oxidation-reduction process	GO:0008270|zinc ion binding GO:0016491|oxidoreductase activity	GO:0005886|plasma membrane
pt2_06083	A	A1S	Potri.002G108800	Potri.002G108800(AS)	POPTR_0002s10950	NA	NA	AT5G09620.1	| Symbols: | Octicosapeptide/Phox/Bem1p family protein | chr5:2983757-2985352 REVERSE LENGTH=531	LOC_Os02g56480.1	protein|PB1 domain containing protein, expressed	IMGA|Medtr5g067120.1	PB1 domain-containing protein chr5 27360391-27361542 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06084	A	A1S	Potri.002G108900	Potri.002G108900(AS)	POPTR_0002s10960	NA	NA	AT2G22660.2	| Symbols: | Protein of unknown function (duplicated DUF1399) | chr2:9627737-9630840 FORWARD LENGTH=819	LOC_Os11g40590.2	protein|DUF1399 containing protein, putative, expressed	IMGA|Medtr5g030890.1	Glycine-rich protein chr5 12792186-12786144 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005886|plasma membrane
pt2_06085	A	A1S	Potri.002G109000	Potri.002G109000(AS)	POPTR_0002s10970	sp|Q9STV4|CIPK8_ARATH	CBL-interacting serine/threonine-protein kinase 8 OS=Arabidopsis thaliana GN=CIPK8 PE=1 SV=1	AT4G24400.1	| Symbols: CIPK8, SnRK3.13, PKS11, ATCIPK8 | CBL-interacting protein kinase 8 | chr4:12617379-12620481 FORWARD LENGTH=445	LOC_Os01g35184.1	protein|CAMK_KIN1/SNF1/Nim1_like.10 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	IMGA|Medtr5g067150.1	CBL-interacting protein kinase chr5 27383725-27373606 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0007165|signal transduction GO:0009749|response to glucose stimulus GO:0010167|response to nitrate GO:0046777|protein autophosphorylation GO:0048364|root development	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_06086	A	A1S	Potri.002G109000	Potri.002G109000(AS)	POPTR_0002s10970	sp|Q9STV4|CIPK8_ARATH	CBL-interacting serine/threonine-protein kinase 8 OS=Arabidopsis thaliana GN=CIPK8 PE=1 SV=1	AT4G24400.1	| Symbols: CIPK8, SnRK3.13, PKS11, ATCIPK8 | CBL-interacting protein kinase 8 | chr4:12617379-12620481 FORWARD LENGTH=445	LOC_Os01g35184.1	protein|CAMK_KIN1/SNF1/Nim1_like.10 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	IMGA|Medtr5g067150.1	CBL-interacting protein kinase chr5 27383725-27373606 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0007165|signal transduction GO:0009749|response to glucose stimulus GO:0010167|response to nitrate GO:0046777|protein autophosphorylation GO:0048364|root development	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_06087	A	A1S	Potri.002G109000	Potri.002G109000(AS)	POPTR_0002s10970	sp|Q9STV4|CIPK8_ARATH	CBL-interacting serine/threonine-protein kinase 8 OS=Arabidopsis thaliana GN=CIPK8 PE=1 SV=1	AT4G24400.1	| Symbols: CIPK8, SnRK3.13, PKS11, ATCIPK8 | CBL-interacting protein kinase 8 | chr4:12617379-12620481 FORWARD LENGTH=445	LOC_Os01g35184.1	protein|CAMK_KIN1/SNF1/Nim1_like.10 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	IMGA|Medtr5g067150.1	CBL-interacting protein kinase chr5 27383725-27373606 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0007165|signal transduction GO:0009749|response to glucose stimulus GO:0010167|response to nitrate GO:0046777|protein autophosphorylation GO:0048364|root development	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_06088	A	A3S	Potri.002G109100	Potri.002G109100(AS) Potri.005G151200(DS) Potri.005G155000(DS)	POPTR_0002s10980	sp|Q9LXF2|PP385_ARATH	Pentatricopeptide repeat-containing protein At5g15300 OS=Arabidopsis thaliana GN=PCMP-E40 PE=2 SV=2	AT5G15300.1	| Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr5:4968384-4970030 REVERSE LENGTH=548	LOC_Os11g29230.1	protein|pentatricopeptide repeat protein PPR986-12, putative, expressed	IMGA|Medtr5g067140.1	Pentatricopeptide repeat-containing protein chr5 27370269-27373316 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_06089	A	A1S	Potri.002G109200	Potri.002G109200(AS)	POPTR_0002s10990	sp|P50433|GLYM_SOLTU	Serine hydroxymethyltransferase, mitochondrial OS=Solanum tuberosum PE=2 SV=1	AT5G26780.1	| Symbols: SHM2 | serine hydroxymethyltransferase 2 | chr5:9418299-9421725 FORWARD LENGTH=517	LOC_Os03g52840.1	protein|serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed	IMGA|Medtr5g030950.1	Serine hydroxymethyltransferase chr5 12843132-12838759 F EGN_Mt100125 20111014	GO:0006544|glycine metabolic process GO:0006563|L-serine metabolic process GO:0009744|response to sucrose stimulus GO:0009749|response to glucose stimulus GO:0009750|response to fructose stimulus	GO:0003824|catalytic activity GO:0004372|glycine hydroxymethyltransferase activity GO:0008270|zinc ion binding GO:0030170|pyridoxal phosphate binding GO:0050897|cobalt ion binding	GO:0005739|mitochondrion GO:0005747|mitochondrial respiratory chain complex I GO:0005829|cytosol
pt2_06090	A	A1S	Potri.002G109300	Potri.002G109300(AS)	POPTR_0002s11000	sp|O04514|OPT2_ARATH	Oligopeptide transporter 2 OS=Arabidopsis thaliana GN=OPT2 PE=2 SV=2	AT1G09930.1	| Symbols: ATOPT2, OPT2 | oligopeptide transporter 2 | chr1:3227490-3230043 REVERSE LENGTH=734	LOC_Os01g43940.1	protein|oligopeptide transporter, putative, expressed	IMGA|Medtr5g096200.1	Oligopeptide transporter OPT family chr5 41016271-41022340 E EGN_Mt100125 20111014	GO:0006857|oligopeptide transport GO:0055085|transmembrane transport	GO:0015198|oligopeptide transporter activity	GO:0005737|cytoplasm GO:0005886|plasma membrane GO:0016020|membrane
pt2_06091	A	A1S	Potri.002G109400	Potri.002G109400(AS)	POPTR_0002s11010	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06092	A	A1S	Potri.002G109500	Potri.002G109500(AS)	POPTR_0002s11020	sp|Q3EDF8|PPR28_ARATH	Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1	AT1G09900.1	| Symbols: | Pentatricopeptide repeat (PPR-like) superfamily protein | chr1:3218133-3219929 FORWARD LENGTH=598	LOC_Os02g35750.1	protein|pentatricopeptide repeat domain containing protein, putative, expressed	IMGA|Medtr5g090170.1	Auxin response factor chr5 38240367-38247794 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0016020|membrane
pt2_06093	C	C1S	Potri.002G109600	Potri.002G109600(CS)	sp|A2RVQ5|AGL16_ARATH	Agamous-like MADS-box protein AGL16 OS=Arabidopsis thaliana GN=AGL16 PE=1 SV=1	AT3G57230.1	| Symbols: AGL16 | AGAMOUS-like 16 | chr3:21177710-21180671 FORWARD LENGTH=240	LOC_Os02g36924.1	protein|OsMADS27 - MADS-box family gene with MIKCc type-box, expressed	IMGA|Medtr5g066990.1	MADS-box protein chr5 27303478-27312386 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006944|cellular membrane fusion GO:0009556|microsporogenesis GO:0010440|stomatal lineage progression GO:0048481|ovule development GO:0052543|callose deposition in cell wall	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0008134|transcription factor binding GO:0042803|protein homodimerization activity	GO:0005634|nucleus
pt2_06094	G	G1	NA	NA	POPTR_0002s11040	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06095	A	A1S	Potri.002G109800	Potri.002G109800(AS)	POPTR_0002s11050	sp|Q6GPH4|XAF1_HUMAN	XIAP-associated factor 1 OS=Homo sapiens GN=XAF1 PE=1 SV=1	AT1G09920.1	| Symbols: | TRAF-type zinc finger-related | chr1:3224863-3226860 REVERSE LENGTH=192	LOC_Os03g24184.1	protein|TRAF-type zinc finger domain-containing protein 1, putative, expressed	IMGA|Medtr5g066840.1	TRAF-type zinc finger domain-containing protein chr5 27254876-27249183 E EGN_Mt100125 20111014	GO:0006623|protein targeting to vacuole GO:0008150|biological_process GO:0016192|vesicle-mediated transport	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_06096	A	A1S	Potri.002G109800	Potri.002G109800(AS)	POPTR_0002s11050	sp|Q6GPH4|XAF1_HUMAN	XIAP-associated factor 1 OS=Homo sapiens GN=XAF1 PE=1 SV=1	AT1G09920.1	| Symbols: | TRAF-type zinc finger-related | chr1:3224863-3226860 REVERSE LENGTH=192	LOC_Os03g24184.1	protein|TRAF-type zinc finger domain-containing protein 1, putative, expressed	IMGA|Medtr5g066840.1	TRAF-type zinc finger domain-containing protein chr5 27254876-27249183 E EGN_Mt100125 20111014	GO:0006623|protein targeting to vacuole GO:0008150|biological_process GO:0016192|vesicle-mediated transport	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_06097	A	A1S	Potri.002G109900	Potri.002G109900(AS)	POPTR_0002s11060	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06098	A	A1S	Potri.002G110000	Potri.002G110000(AS)	POPTR_0002s11070	sp|Q8RJP2|RHIE_DICD3	Rhamnogalacturonate lyase OS=Dickeya dadantii (strain 3937) GN=rhiE PE=1 SV=1	AT1G09890.1	| Symbols: | Rhamnogalacturonate lyase family protein | chr1:3214237-3217386 REVERSE LENGTH=617	LOC_Os08g44020.2	protein|rhamnogalacturonate lyase, putative, expressed	IMGA|Medtr5g066770.1	LG27/30-like gene chr5 27232607-27225091 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0016829|lyase activity GO:0030246|carbohydrate binding	GO:0005575|cellular_component GO:0005576|extracellular region
pt2_06099	A	A1S	Potri.002G110100	Potri.002G110100(AS)	POPTR_0002s11080	sp|Q8RJP2|RHIE_DICD3	Rhamnogalacturonate lyase OS=Dickeya dadantii (strain 3937) GN=rhiE PE=1 SV=1	AT1G09890.1	| Symbols: | Rhamnogalacturonate lyase family protein | chr1:3214237-3217386 REVERSE LENGTH=617	LOC_Os08g44020.2	protein|rhamnogalacturonate lyase, putative, expressed	IMGA|Medtr5g066770.1	LG27/30-like gene chr5 27232607-27225091 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0016829|lyase activity GO:0030246|carbohydrate binding	GO:0005575|cellular_component GO:0005576|extracellular region
pt2_06100	A	A1S	Potri.002G110200	Potri.002G110200(AS)	POPTR_0002s11090	sp|Q8RJP2|RHIE_DICD3	Rhamnogalacturonate lyase OS=Dickeya dadantii (strain 3937) GN=rhiE PE=1 SV=1	AT1G09890.1	| Symbols: | Rhamnogalacturonate lyase family protein | chr1:3214237-3217386 REVERSE LENGTH=617	LOC_Os08g44020.3	protein|rhamnogalacturonate lyase, putative, expressed	IMGA|Medtr5g066770.1	LG27/30-like gene chr5 27232607-27225091 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0016829|lyase activity GO:0030246|carbohydrate binding	GO:0005575|cellular_component GO:0005576|extracellular region
pt2_06101	A	A1S	Potri.002G110300	Potri.002G110300(AS)	POPTR_0002s11100	sp|Q8RJP2|RHIE_DICD3	Rhamnogalacturonate lyase OS=Dickeya dadantii (strain 3937) GN=rhiE PE=1 SV=1	AT4G24430.1	| Symbols: | Rhamnogalacturonate lyase family protein | chr4:12630018-12632975 FORWARD LENGTH=646	LOC_Os08g44020.3	protein|rhamnogalacturonate lyase, putative, expressed	IMGA|Medtr5g066770.1	LG27/30-like gene chr5 27232607-27225091 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0016829|lyase activity GO:0030246|carbohydrate binding	GO:0005575|cellular_component GO:0005576|extracellular region GO:0005774|vacuolar membrane
pt2_06102	A	A1S	Potri.002G110400	Potri.002G110400(AS)	POPTR_0002s11105	sp|Q9STV0|GWD2_ARATH	Alpha-glucan water dikinase 2 OS=Arabidopsis thaliana GN=GWD2 PE=2 SV=3	AT4G24450.1	| Symbols: GWD3, PWD, ATGWD2 | phosphoglucan, water dikinase | chr4:12635761-12642631 FORWARD LENGTH=1278	LOC_Os06g30310.1	protein|alpha-glucan water dikinase, chloroplast precursor, putative, expressed	NA	NA	GO:0016310|phosphorylation	GO:0005524|ATP binding GO:0016301|kinase activity	GO:0009507|chloroplast GO:0009941|chloroplast envelope
pt2_06103	A	A1S	Potri.002G110500	Potri.002G110500(AS)	POPTR_0002s11110	sp|Q8GY23|UPL1_ARATH	E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana GN=UPL1 PE=1 SV=3	AT1G55860.1	| Symbols: UPL1 | ubiquitin-protein ligase 1 | chr1:20879900-20895393 REVERSE LENGTH=3930	LOC_Os12g24080.1	protein|HECT-domain domain containing protein, expressed	IMGA|Medtr5g066710.1	E3 ubiquitin-protein ligase HUWE1 chr5 27193397-27176650 E EGN_Mt100125 20111014	GO:0006464|cellular protein modification process GO:0006511|ubiquitin-dependent protein catabolic process GO:0016567|protein ubiquitination GO:0042787|protein ubiquitination involved in ubiquitin-dependent protein catabolic process	GO:0004842|ubiquitin-protein ligase activity GO:0016881|acid-amino acid ligase activity	GO:0000151|ubiquitin ligase complex GO:0005622|intracellular GO:0005634|nucleus GO:0005739|mitochondrion GO:0005829|cytosol
pt2_06104	A	A1S	Potri.002G110600	Potri.002G110600(AS)	POPTR_0002s11120	sp|O81635|ATK4_ARATH	Kinesin-4 OS=Arabidopsis thaliana GN=ATK4 PE=1 SV=2	AT2G22610.2	| Symbols: | Di-glucose binding protein with Kinesin motor domain | chr2:9599550-9604626 FORWARD LENGTH=1062	LOC_Os03g02290.2	protein|kinesin motor domain containing protein, putative, expressed	IMGA|Medtr5g031470.1	Kinesin-4 chr5 13075037-13067334 E EGN_Mt100125 20111014	GO:0000226|microtubule cytoskeleton organization GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0009909|regulation of flower development GO:0016458|gene silencing GO:0016570|histone modification GO:0016572|histone phosphorylation GO:0031047|gene silencing by RNA GO:0034968|histone lysine methylation GO:0048449|floral organ formation GO:0048451|petal formation GO:0048453|sepal formation GO:0051567|histone H3-K9 methylation	GO:0003777|microtubule motor activity GO:0005524|ATP binding	GO:0005737|cytoplasm
pt2_06105	A	A1S	Potri.002G110700	Potri.002G110700(AS)	POPTR_0002s11130	NA	NA	AT1G58250.1	| Symbols: SAB | Golgi-body localisation protein domain ;RNA pol II promoter Fmp27 protein domain | chr1:21587317-21601373 REVERSE LENGTH=2607	LOC_Os03g23030.1	protein|aberrant pollen transmission 1, putative, expressed	IMGA|Medtr5g066650.1	Aberrant pollen transmission chr5 27156592-27143250 E EGN_Mt100125 20111014	GO:0009723|response to ethylene stimulus GO:0009825|multidimensional cell growth GO:0016049|cell growth	NA	GO:0005576|extracellular region GO:0005886|plasma membrane
pt2_06106	A	A1S	Potri.002G110700	Potri.002G110700(AS)	POPTR_0002s11130	NA	NA	AT1G58250.1	| Symbols: SAB | Golgi-body localisation protein domain ;RNA pol II promoter Fmp27 protein domain | chr1:21587317-21601373 REVERSE LENGTH=2607	LOC_Os03g23030.1	protein|aberrant pollen transmission 1, putative, expressed	IMGA|Medtr5g066650.1	Aberrant pollen transmission chr5 27156592-27143250 E EGN_Mt100125 20111014	GO:0009723|response to ethylene stimulus GO:0009825|multidimensional cell growth GO:0016049|cell growth	NA	GO:0005576|extracellular region GO:0005886|plasma membrane
pt2_06107	A	A1S	Potri.002G110700	Potri.002G110700(AS)	POPTR_0002s11130	NA	NA	AT1G58250.1	| Symbols: SAB | Golgi-body localisation protein domain ;RNA pol II promoter Fmp27 protein domain | chr1:21587317-21601373 REVERSE LENGTH=2607	LOC_Os03g23030.1	protein|aberrant pollen transmission 1, putative, expressed	IMGA|Medtr5g066650.1	Aberrant pollen transmission chr5 27156592-27143250 E EGN_Mt100125 20111014	GO:0009723|response to ethylene stimulus GO:0009825|multidimensional cell growth GO:0016049|cell growth	NA	GO:0005576|extracellular region GO:0005886|plasma membrane
pt2_06108	A	A1S	Potri.002G110800	Potri.002G110800(AS)	POPTR_0002s11140	sp|Q8GXL7|GAT24_ARATH	GATA transcription factor 24 OS=Arabidopsis thaliana GN=GATA24 PE=2 SV=2	AT3G21175.2	| Symbols: ZML1, GATA24 | ZIM-like 1 | chr3:7422832-7424598 FORWARD LENGTH=295	LOC_Os03g47970.1	protein|GATA transcription factor 25, putative, expressed	IMGA|Medtr5g066510.1	GATA transcription factor chr5 27082153-27086994 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_06109	A	A2S	Potri.002G110900	Potri.002G110900(AS) Potri.005G152800(DS)	POPTR_0002s11150	sp|Q9LRH6|GAT25_ARATH	GATA transcription factor 25 OS=Arabidopsis thaliana GN=GATA25 PE=2 SV=2	AT4G24470.2	| Symbols: ZIM, GATA25 | GATA-type zinc finger protein with TIFY domain | chr4:12645785-12647734 FORWARD LENGTH=309	LOC_Os06g48534.1	protein|GATA transcription factor 25, putative, expressed	IMGA|Medtr5g066510.1	GATA transcription factor chr5 27082153-27086994 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0007623|circadian rhythm	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_06110	A	A1S	Potri.002G111000	Potri.002G111000(AS)	POPTR_0002s11160	sp|Q54U63|LVSC_DICDI	BEACH domain-containing protein lvsC OS=Dictyostelium discoideum GN=lvsC PE=4 SV=2	AT1G58230.1	| Symbols: | binding | chr1:21566331-21578865 FORWARD LENGTH=2604	LOC_Os02g06720.1	protein|WD domain containing protein, putative, expressed	IMGA|Medtr1g071260.1	WD repeat and FYVE domain-containing protein chr1 17536650-17518820 H EGN_Mt100125 20111014	GO:0007165|signal transduction	NA	GO:0005739|mitochondrion
pt2_06111	A	A1S	Potri.002G111100	Potri.002G111100(AS)	POPTR_0002s11170	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06112	A	A1S	Potri.002G111200	Potri.002G111200(AS)	POPTR_0002s11180	sp|Q05609|CTR1_ARATH	Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana GN=CTR1 PE=1 SV=1	AT4G24480.1	| Symbols: | Protein kinase superfamily protein | chr4:12650410-12654755 FORWARD LENGTH=956	LOC_Os04g52140.1	protein|protein kinase domain containing protein, expressed	IMGA|Medtr5g066490.1	Serine/threonine protein kinase CTR1 chr5 27074324-27066439 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004712|protein serine/threonine/tyrosine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06113	A	A1S	Potri.002G111300	Potri.002G111300(AS)	POPTR_0002s11190	NA	NA	AT5G65520.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:26189876-26190496 REVERSE LENGTH=206	LOC_Os02g10940.1	protein|tetratricopeptide repeat domain containing protein, expressed	NA	NA	GO:0008150|biological_process	NA	NA
pt2_06114	A	A1S	Potri.002G111400	Potri.002G111400(AS)	POPTR_0002s11200	sp|O04492|DRB1_ARATH	Double-stranded RNA-binding protein 1 OS=Arabidopsis thaliana GN=DRB1 PE=1 SV=1	AT1G09700.1	| Symbols: HYL1, DRB1 | dsRNA-binding domain-like superfamily protein | chr1:3137960-3140118 REVERSE LENGTH=419	LOC_Os11g01869.1	protein|double-stranded RNA binding motif containing protein, expressed	NA	NA	GO:0009733|response to auxin stimulus GO:0009735|response to cytokinin stimulus GO:0009737|response to abscisic acid stimulus GO:0010267|production of ta-siRNAs involved in RNA interference GO:0010305|leaf vascular tissue pattern formation GO:0010589|leaf proximal/distal pattern formation GO:0031054|pre-miRNA processing GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0035279|mRNA cleavage involved in gene silencing by miRNA GO:0051607|defense response to virus	GO:0003723|RNA binding GO:0003725|double-stranded RNA binding GO:0005515|protein binding GO:0035198|miRNA binding	GO:0005622|intracellular GO:0005634|nucleus GO:0005737|cytoplasm GO:0010445|nuclear dicing body
pt2_06115	A	A1S	Potri.002G111500	Potri.002G111500(AS)	POPTR_0002s11210	NA	NA	AT4G24500.2	| Symbols: | hydroxyproline-rich glycoprotein family protein | chr4:12658732-12660211 FORWARD LENGTH=290	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06116	A	A1S	Potri.002G111600	Potri.002G111600(AS)	POPTR_0002s11220	sp|Q9FIE3|VIN3_ARATH	Protein VERNALIZATION INSENSITIVE 3 OS=Arabidopsis thaliana GN=VIN3 PE=2 SV=2	AT2G18880.1	| Symbols: VEL2 | vernalization5/VIN3-like | chr2:8176386-8178788 FORWARD LENGTH=529	LOC_Os08g12430.1	protein|VERNALIZATION-INSENSITIVE, putative, expressed	IMGA|Medtr5g066440.1	Protein VERNALIZATION INSENSITIVE chr5 27046807-27049808 H EGN_Mt100125 20111014	GO:0007155|cell adhesion GO:0009793|embryo development ending in seed dormancy GO:0010090|trichome morphogenesis GO:0010228|vegetative to reproductive phase transition of meristem GO:0016926|protein desumoylation GO:0045010|actin nucleation GO:0048587|regulation of short-day photoperiodism, flowering GO:0048765|root hair cell differentiation GO:0050665|hydrogen peroxide biosynthetic process GO:0071555|cell wall organization	GO:0035064|methylated histone residue binding	GO:0005634|nucleus GO:0009506|plasmodesma GO:0031519|PcG protein complex
pt2_06117	A	A1S	Potri.002G111700	Potri.002G111700(AS)	POPTR_0002s11230	sp|Q9SGP2|HSL1_ARATH	Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1	AT5G49660.1	| Symbols: | Leucine-rich repeat transmembrane protein kinase family protein | chr5:20161401-20164534 REVERSE LENGTH=966	LOC_Os12g43660.1	protein|receptor-like protein kinase HAIKU2 precursor, putative, expressed	IMGA|contig_56175_1.1	Receptor-like kinase contig_56175 3846-740 E PREDN 20111014	GO:0002237|response to molecule of bacterial origin GO:0006468|protein phosphorylation GO:0006612|protein targeting to membrane GO:0007165|signal transduction GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010051|xylem and phloem pattern formation GO:0010103|stomatal complex morphogenesis GO:0010363|regulation of plant-type hypersensitive response GO:0048443|stamen development	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_06118	A	A1S	Potri.002G111800	Potri.002G111800(AS)	POPTR_0002s11240	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06119	A	A1S	Potri.002G111900	Potri.002G111900(AS)	POPTR_0002s11250	sp|Q6VAG0|TBA2_GOSHI	Tubulin alpha-2 chain OS=Gossypium hirsutum PE=2 SV=1	AT1G50010.1	| Symbols: TUA2 | tubulin alpha-2 chain | chr1:18517737-18519729 FORWARD LENGTH=450	LOC_Os03g51600.1	protein|tubulin/FtsZ domain containing protein, putative, expressed	IMGA|contig_76569_1.1	Tubulin alpha-7 chain contig_76569 5816-1428 H PREDN 20111014	GO:0006184|GTP catabolic process GO:0009651|response to salt stress GO:0051258|protein polymerization	GO:0003924|GTPase activity GO:0005198|structural molecule activity GO:0005200|structural constituent of cytoskeleton GO:0005525|GTP binding	GO:0005618|cell wall GO:0005737|cytoplasm GO:0005829|cytosol GO:0005874|microtubule GO:0016020|membrane GO:0043234|protein complex GO:0045298|tubulin complex
pt2_06120	C	C1S	Potri.002G112000	Potri.002G112000(CS)	NA	NA	AT5G49650.1	| Symbols: XK-2, XK2 | xylulose kinase-2 | chr5:20152898-20155574 FORWARD LENGTH=558	LOC_Os07g44660.1	protein|FGGY family of carbohydrate kinases, putative, expressed	NA	NA	GO:0005975|carbohydrate metabolic process GO:0005997|xylulose metabolic process	GO:0004856|xylulokinase activity GO:0016773|phosphotransferase activity, alcohol group as acceptor	GO:0005829|cytosol
pt2_06121	A	A1S	Potri.002G112100	Potri.002G112100(AS)	POPTR_0002s11270	sp|P92934|AAP6_ARATH	Amino acid permease 6 OS=Arabidopsis thaliana GN=AAP6 PE=1 SV=1	AT5G49630.1	| Symbols: AAP6 | amino acid permease 6 | chr5:20142681-20146441 REVERSE LENGTH=481	LOC_Os07g04180.1	protein|amino acid transporter, putative, expressed	IMGA|Medtr1g007380.1	Amino acid transporter chr1 886400-882345 F EGN_Mt100125 20111014	GO:0009414|response to water deprivation GO:0009651|response to salt stress GO:0015810|aspartate transport GO:0015827|tryptophan transport	GO:0015171|amino acid transmembrane transporter activity GO:0015172|acidic amino acid transmembrane transporter activity GO:0015175|neutral amino acid transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_06122	A	A1S	Potri.002G112200	Potri.002G112200(AS)	POPTR_0002s11290	sp|P58223|Y4837_ARATH	KH domain-containing protein At4g18375 OS=Arabidopsis thaliana GN=At4g18375 PE=2 SV=1	AT5G53060.1	| Symbols: | RNA-binding KH domain-containing protein | chr5:21515355-21518197 FORWARD LENGTH=652	LOC_Os01g13470.1	protein|KH domain containing protein, putative, expressed	IMGA|Medtr5g031720.1	Poly(rC)-binding protein chr5 13182665-13176731 F EGN_Mt100125 20111014	GO:0006397|mRNA processing GO:0010093|specification of floral organ identity	GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005634|nucleus
pt2_06123	A	A1S	Potri.002G112300	Potri.002G112300(AS)	POPTR_0002s11300	sp|O82289|SRO1_ARATH	Probable inactive poly [ADP-ribose] polymerase SRO1 OS=Arabidopsis thaliana GN=SRO1 PE=1 SV=2	AT2G35510.1	| Symbols: SRO1 | similar to RCD one 1 | chr2:14916898-14919198 REVERSE LENGTH=568	LOC_Os03g12820.2	protein|ATP8, putative, expressed	IMGA|Medtr5g032190.1	hypothetical protein chr5 13403190-13409591 E EGN_Mt100125 20111014	GO:0006970|response to osmotic stress GO:0006979|response to oxidative stress GO:0009651|response to salt stress GO:0009790|embryo development GO:0010102|lateral root morphogenesis GO:0048573|photoperiodism, flowering	GO:0003950|NAD+ ADP-ribosyltransferase activity	GO:0005634|nucleus
pt2_06124	A	A1S	Potri.002G112500	Potri.002G112500(AS)	POPTR_0002s11310	sp|Q9FKP0|PSRP6_ARATH	50S ribosomal protein 6, chloroplastic OS=Arabidopsis thaliana GN=PSRP6 PE=3 SV=1	AT5G17870.1	| Symbols: PSRP6 | plastid-specific 50S ribosomal protein 6 | chr5:5907817-5908137 FORWARD LENGTH=106	LOC_Os11g34940.1	protein|plastid-specific 50S ribosomal protein 6, chloroplast precursor, putative, expressed	NA	NA	GO:0006412|translation	GO:0003735|structural constituent of ribosome GO:0019843|rRNA binding	GO:0009507|chloroplast
pt2_06125	A	A1S	Potri.002G112600	Potri.002G112600(AS)	POPTR_0002s11320	NA	NA	AT1G10020.1	| Symbols: | Protein of unknown function (DUF1005) | chr1:3269939-3271732 REVERSE LENGTH=461	LOC_Os07g04150.1	protein|stress-induced protein, putative, expressed	IMGA|Medtr5g005420.1	hypothetical protein chr5 200495-202040 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06126	A	A1S	Potri.002G112700	Potri.002G112700(AS)	POPTR_0002s11330	sp|O80594|ERG28_ARATH	Ergosterol biosynthetic protein 28 OS=Arabidopsis thaliana GN=At1g10030 PE=2 SV=2	AT1G10030.1	| Symbols: ERG28 | homolog of yeast ergosterol28 | chr1:3273972-3275631 FORWARD LENGTH=129	LOC_Os12g43670.1	protein|ergosterol biosynthetic protein 28, putative, expressed	NA	NA	GO:0008150|biological_process GO:0016126|sterol biosynthetic process GO:0019745|pentacyclic triterpenoid biosynthetic process	NA	GO:0005739|mitochondrion GO:0016021|integral to membrane
pt2_06127	A	A1S	Potri.002G112800	Potri.002G112800(AS)	POPTR_0002s11340	NA	NA	AT4G37820.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G22795.1); Has 433572 Blast hits to 177005 proteins in 4263 species: Archae - 2016; Bacteria - 67591; Metazoa - 157995; Fungi - 49745; Plants - 22011; Viruses - 2192; Other Eukaryotes - 132022 (source: NCBI BLink). | chr4:17785692-17787290 FORWARD LENGTH=532	LOC_Os03g51640.1	protein|expressed protein	IMGA|Medtr5g005430.1	hypothetical protein chr5 206515-204833 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_06128	A	A1S	Potri.002G112900	Potri.002G112900(AS)	POPTR_0002s11350	sp|Q9T068|EPFL2_ARATH	EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana GN=EPFL2 PE=2 SV=1	AT4G37810.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1); Has 149 Blast hits to 149 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:17780970-17781544 FORWARD LENGTH=128	LOC_Os07g04020.1	protein|expressed protein	IMGA|Medtr5g014840.1	EPIDERMAL PATTERNING FACTOR-like protein chr5 4785332-4784303 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_06129	A	A1S	Potri.002G113000	Potri.002G113000(AS)	POPTR_0002s11360	NA	NA	AT1G10040.1	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr1:3276108-3278464 REVERSE LENGTH=412	LOC_Os08g34750.1	protein|serine esterase family protein, putative, expressed	NA	NA	NA	NA	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06130	A	A1S	Potri.002G113100	Potri.002G113100(AS)	POPTR_0002s11370	sp|O69230|XYNC_PAEBA	Endo-1,4-beta-xylanase C OS=Paenibacillus barcinonensis GN=xynC PE=1 SV=1	AT1G58370.1	| Symbols: RXF12, ATXYN1 | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein | chr1:21684751-21688209 FORWARD LENGTH=917	LOC_Os07g27320.1	protein|glycosyl hydrolase family 10 protein, putative, expressed	IMGA|contig_242493_1.1	"Endo-1,4-beta-xylanase A" contig_242493 544-2339 E PREDN 20111014	GO:0005975|carbohydrate metabolic process GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0016798|hydrolase activity, acting on glycosyl bonds GO:0031176|endo-1,4-beta-xylanase activity GO:0043169|cation binding	GO:0005576|extracellular region GO:0005618|cell wall
pt2_06131	A	A1S	Potri.002G113100	Potri.002G113100(AS)	POPTR_0002s11380	sp|O69230|XYNC_PAEBA	Endo-1,4-beta-xylanase C OS=Paenibacillus barcinonensis GN=xynC PE=1 SV=1	AT1G58370.1	| Symbols: RXF12, ATXYN1 | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein | chr1:21684751-21688209 FORWARD LENGTH=917	LOC_Os07g27320.1	protein|glycosyl hydrolase family 10 protein, putative, expressed	IMGA|contig_242493_1.1	"Endo-1,4-beta-xylanase A" contig_242493 544-2339 E PREDN 20111014	GO:0005975|carbohydrate metabolic process GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0016798|hydrolase activity, acting on glycosyl bonds GO:0031176|endo-1,4-beta-xylanase activity GO:0043169|cation binding	GO:0005576|extracellular region GO:0005618|cell wall
pt2_06132	A	A1S	Potri.002G113300	Potri.002G113300(AS)	POPTR_0002s11400	sp|O04135|KNAP2_MALDO	Homeobox protein knotted-1-like 2 OS=Malus domestica PE=2 SV=1	AT4G08150.1	| Symbols: KNAT1, BP, BP1 | KNOTTED-like from Arabidopsis thaliana | chr4:5147969-5150610 REVERSE LENGTH=398	LOC_Os03g51690.2	protein|Homeobox domain containing protein, expressed	IMGA|Medtr5g033720.1	Knotted-1 homeobox protein chr5 14118349-14126679 E EGN_Mt100125 20111014	GO:0001708|cell fate specification GO:0006355|regulation of transcription, DNA-dependent GO:0007389|pattern specification process GO:0009855|determination of bilateral symmetry GO:0009887|organ morphogenesis GO:0009944|polarity specification of adaxial/abaxial axis GO:0010014|meristem initiation GO:0010051|xylem and phloem pattern formation GO:0045165|cell fate commitment GO:0048438|floral whorl development GO:0048439|flower morphogenesis GO:0048513|organ development GO:0048519|negative regulation of biological process	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_06133	A	A1S	Potri.002G113400	Potri.002G113400(AS)	POPTR_0002s11410	sp|P46604|HAT22_ARATH	Homeobox-leucine zipper protein HAT22 OS=Arabidopsis thaliana GN=HAT22 PE=1 SV=1	AT4G37790.1	| Symbols: HAT22 | Homeobox-leucine zipper protein family | chr4:17768241-17769272 FORWARD LENGTH=278	LOC_Os08g36220.1	protein|homeobox associated leucine zipper, putative, expressed	IMGA|Medtr5g014890.1	Homeobox-leucine zipper protein HOX27 chr5 4809645-4807559 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006473|protein acetylation GO:0009735|response to cytokinin stimulus	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_06134	A	A1S	Potri.002G113500	Potri.002G113500(AS)	POPTR_0002s11420	sp|Q9M439|BCAT2_ARATH	Branched-chain-amino-acid aminotransferase 2, chloroplastic OS=Arabidopsis thaliana GN=BCAT2 PE=1 SV=1	AT1G10070.2	| Symbols: ATBCAT-2, BCAT-2 | branched-chain amino acid transaminase 2 | chr1:3288255-3290164 FORWARD LENGTH=388	LOC_Os10g40200.1	protein|aminotransferase domain containing protein, putative, expressed	IMGA|Medtr5g014960.1	Branched-chain-amino-acid aminotransferase chr5 4833123-4840236 F EGN_Mt100125 20111014	GO:0008152|metabolic process GO:0009081|branched-chain amino acid metabolic process GO:0009407|toxin catabolic process	GO:0003824|catalytic activity GO:0004084|branched-chain-amino-acid transaminase activity	GO:0005634|nucleus GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_06135	A	A1S	Potri.002G113600	Potri.002G113600(AS)	POPTR_0002s11430	sp|Q9M439|BCAT2_ARATH	Branched-chain-amino-acid aminotransferase 2, chloroplastic OS=Arabidopsis thaliana GN=BCAT2 PE=1 SV=1	AT1G10070.2	| Symbols: ATBCAT-2, BCAT-2 | branched-chain amino acid transaminase 2 | chr1:3288255-3290164 FORWARD LENGTH=388	LOC_Os05g48450.3	protein|aminotransferase domain containing protein, putative, expressed	IMGA|Medtr5g014960.1	Branched-chain-amino-acid aminotransferase chr5 4833123-4840236 F EGN_Mt100125 20111014	GO:0008152|metabolic process GO:0009081|branched-chain amino acid metabolic process GO:0009407|toxin catabolic process GO:0009744|response to sucrose stimulus GO:0009750|response to fructose stimulus	GO:0003824|catalytic activity GO:0004084|branched-chain-amino-acid transaminase activity	GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_06136	A	A1S	Potri.002G113700	Potri.002G113700(AS)	POPTR_0002s11440	sp|Q9M2Y9|RAX3_ARATH	Transcription factor RAX3 OS=Arabidopsis thaliana GN=RAX3 PE=2 SV=1	AT3G49690.1	| Symbols: RAX3, MYB84, ATMYB84 | myb domain protein 84 | chr3:18427941-18429100 FORWARD LENGTH=310	LOC_Os03g56090.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr5g014990.1	Myb transcription factor-like protein chr5 4856342-4857831 F EGN_Mt100125 20111014	GO:0000041|transition metal ion transport GO:0006355|regulation of transcription, DNA-dependent GO:0009739|response to gibberellin stimulus GO:0009751|response to salicylic acid stimulus	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_06137	A	A1S	Potri.002G113800	Potri.002G113800(AS)	POPTR_0002s11450	sp|Q06538|YL241_YEAST	Uncharacterized membrane protein YLR241W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YLR241W PE=1 SV=1	AT1G58520.1	| Symbols: RXW8 | lipases;hydrolases, acting on ester bonds | chr1:21733543-21738165 FORWARD LENGTH=746	LOC_Os12g43720.1	protein|early-responsive to dehydration protein-related, putative, expressed	IMGA|Medtr5g042560.1	"Membrane protein, putative" chr5 18283802-18289040 H EGN_Mt100125 20111014	GO:0006629|lipid metabolic process	GO:0016298|lipase activity GO:0016788|hydrolase activity, acting on ester bonds	GO:0005576|extracellular region GO:0009507|chloroplast GO:0016020|membrane
pt2_06138	A	A1S	Potri.002G113900	Potri.002G113900(AS)	POPTR_0002s11460	sp|Q00257|1A12_CUCMA	1-aminocyclopropane-1-carboxylate synthase CMA101 OS=Cucurbita maxima GN=ACS2 PE=2 SV=1	AT4G37770.1	| Symbols: ACS8 | 1-amino-cyclopropane-1-carboxylate synthase 8 | chr4:17752222-17753925 FORWARD LENGTH=469	LOC_Os03g51740.1	protein|aminotransferase, classes I and II, domain containing protein, expressed	IMGA|Medtr5g015020.1	1-aminocyclopropane-1-carboxylate synthase chr5 4879142-4877065 E EGN_Mt100125 20111014	GO:0009058|biosynthetic process GO:0009693|ethylene biosynthetic process GO:0010200|response to chitin GO:0042218|1-aminocyclopropane-1-carboxylate biosynthetic process	GO:0003824|catalytic activity GO:0005515|protein binding GO:0016740|transferase activity GO:0016847|1-aminocyclopropane-1-carboxylate synthase activity GO:0030170|pyridoxal phosphate binding GO:0042802|identical protein binding	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_06139	A	A1S	Potri.002G114000	Potri.002G114000(AS)	POPTR_0002s11470	sp|Q9M2Y6|Y3972_ARATH	Uncharacterized protein At3g49720 OS=Arabidopsis thaliana GN=At3g49720 PE=1 SV=1	AT3G49720.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, Golgi apparatus, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65810.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:18440192-18441655 REVERSE LENGTH=261	LOC_Os01g05070.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005768|endosome GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0005886|plasma membrane GO:0009535|chloroplast thylakoid membrane GO:0016020|membrane
pt2_06140	A	A1S	Potri.002G114100	Potri.002G114100(AS)	POPTR_0002s11480	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06141	A	A2S	Potri.002G114200	Potri.002G114200(AS) Potri.005G146900(DS)	POPTR_0002s11490	sp|Q9ZQB9|CSLCC_ARATH	Probable xyloglucan glycosyltransferase 12 OS=Arabidopsis thaliana GN=CSLC12 PE=1 SV=1	AT4G07960.1	| Symbols: ATCSLC12, CSLC12 | Cellulose-synthase-like C12 | chr4:4802628-4805114 REVERSE LENGTH=699	LOC_Os05g43530.1	protein|CSLC7 - cellulose synthase-like family C, expressed	NA	NA	NA	GO:0016757|transferase activity, transferring glycosyl groups GO:0016759|cellulose synthase activity	GO:0005794|Golgi apparatus GO:0009506|plasmodesma
pt2_06142	A	A1S	Potri.002G114300	Potri.002G114300(AS)	POPTR_0002s11500	sp|Q9JM15|S38A1_RAT	Sodium-coupled neutral amino acid transporter 1 OS=Rattus norvegicus GN=Slc38a1 PE=1 SV=1	AT3G30390.2	| Symbols: | Transmembrane amino acid transporter family protein | chr3:11977112-11978827 REVERSE LENGTH=460	LOC_Os06g42720.1	protein|amino acid transporter, putative, expressed	IMGA|Medtr5g083770.1	Sodium-coupled neutral amino acid transporter chr5 35126215-35128682 H EGN_Mt100125 20111014	GO:0006865|amino acid transport	GO:0015171|amino acid transmembrane transporter activity	GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005886|plasma membrane GO:0016020|membrane
pt2_06143	C	C1S	Potri.002G114400	Potri.002G114400(CS)	NA	NA	AT3G12210.2	| Symbols: | DNA binding | chr3:3894843-3895879 FORWARD LENGTH=209	LOC_Os03g51880.1	protein|GA15368-PA, putative, expressed	NA	NA	GO:0006281|DNA repair	GO:0003677|DNA binding	GO:0005634|nucleus
pt2_06144	A	A1S	Potri.002G114500	Potri.002G114500(AS)	POPTR_0002s11520	sp|O48651|ERG1_PANGI	Squalene monooxygenase OS=Panax ginseng PE=2 SV=1	AT1G58440.1	| Symbols: XF1, SQE1 | FAD/NAD(P)-binding oxidoreductase family protein | chr1:21714094-21717246 REVERSE LENGTH=531	LOC_Os03g12910.2	protein|squalene monooxygenase, putative, expressed	IMGA|Medtr5g030880.1	Squalene epoxidase chr5 12779816-12782271 I EGN_Mt100125 20111014	GO:0000271|polysaccharide biosynthetic process GO:0008152|metabolic process GO:0009228|thiamine biosynthetic process GO:0009414|response to water deprivation GO:0016126|sterol biosynthetic process GO:0016132|brassinosteroid biosynthetic process GO:0019745|pentacyclic triterpenoid biosynthetic process GO:0055114|oxidation-reduction process	GO:0004506|squalene monooxygenase activity GO:0016491|oxidoreductase activity GO:0050660|flavin adenine dinucleotide binding	GO:0005576|extracellular region GO:0016021|integral to membrane
pt2_06145	A	A2S	Potri.002G114600	Potri.002G114600(AS) Potri.005G146600(DS)	POPTR_0002s11530	NA	NA	AT4G07990.1	| Symbols: | Chaperone DnaJ-domain superfamily protein | chr4:4825650-4828937 REVERSE LENGTH=230	LOC_Os03g51830.1	protein|heat shock protein DnaJ, putative, expressed	NA	NA	GO:0006457|protein folding GO:0009644|response to high light intensity GO:0042542|response to hydrogen peroxide	GO:0031072|heat shock protein binding	GO:0005737|cytoplasm
pt2_06146	A	A1S	Potri.002G114700	Potri.002G114700(AS)	POPTR_0002s11540	sp|Q6NKN9|BH074_ARATH	Transcription factor bHLH74 OS=Arabidopsis thaliana GN=BHLH74 PE=2 SV=1	AT1G10120.1	| Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr1:3304228-3305984 REVERSE LENGTH=366	LOC_Os06g16400.2	protein|helix-loop-helix DNA-binding domain containing protein, expressed	IMGA|contig_61564_1.1	BHLH transcription factor contig_61564 6268-1844 E PREDN 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_06147	A	A1S	Potri.002G114800	Potri.002G114800(AS)	POPTR_0002s11550	sp|Q38914|ANT_ARATH	AP2-like ethylene-responsive transcription factor ANT OS=Arabidopsis thaliana GN=ANT PE=1 SV=2	AT4G37750.1	| Symbols: ANT, DRG, CKC, CKC1 | Integrase-type DNA-binding superfamily protein | chr4:17739782-17742189 FORWARD LENGTH=555	LOC_Os03g56050.1	protein|AP2-like ethylene-responsive transcription factor AINTEGUMENTA, putative, expressed	IMGA|Medtr5g015070.1	AP2-like ethylene-responsive transcription factor ANT chr5 4923104-4919660 E EGN_Mt100125 20111014	GO:0006306|DNA methylation GO:0006346|methylation-dependent chromatin silencing GO:0006355|regulation of transcription, DNA-dependent GO:0007276|gamete generation GO:0009855|determination of bilateral symmetry GO:0009887|organ morphogenesis GO:0009944|polarity specification of adaxial/abaxial axis GO:0009965|leaf morphogenesis GO:0010014|meristem initiation GO:0010051|xylem and phloem pattern formation GO:0010073|meristem maintenance GO:0010089|xylem development GO:0010492|maintenance of shoot apical meristem identity GO:0016246|RNA interference GO:0031047|gene silencing by RNA GO:0042127|regulation of cell proliferation GO:0044036|cell wall macromolecule metabolic process GO:0048439|flower morphogenesis GO:0048519|negative regulation of biological process	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_06148	C	C1S	Potri.002G114900	Potri.002G114900(CS)	NA	NA	AT1G44920.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3054 (InterPro:IPR021414); Has 246 Blast hits to 246 proteins in 119 species: Archae - 14; Bacteria - 181; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). | chr1:16983229-16984408 REVERSE LENGTH=258	LOC_Os03g51930.2	protein|expressed protein	NA	NA	GO:0008150|biological_process GO:0010027|thylakoid membrane organization GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_06149	A	A1S	Potri.002G114900	Potri.002G114900(AS)	POPTR_0002s11570	NA	NA	AT1G44920.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3054 (InterPro:IPR021414); Has 246 Blast hits to 246 proteins in 119 species: Archae - 14; Bacteria - 181; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). | chr1:16983229-16984408 REVERSE LENGTH=258	LOC_Os03g51930.2	protein|expressed protein	NA	NA	GO:0008150|biological_process GO:0010027|thylakoid membrane organization GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_06150	A	A1S	Potri.002G115000	Potri.002G115000(AS)	POPTR_0002s11580	sp|Q9VVE5|MSIR6_DROME	RNA-binding protein Musashi homolog Rbp6 OS=Drosophila melanogaster GN=Rbp6 PE=2 SV=3	AT1G58470.1	| Symbols: ATRBP1, RBP1 | RNA-binding protein 1 | chr1:21727374-21728539 FORWARD LENGTH=360	LOC_Os11g41890.1	protein|RNA recognition motif containing protein, putative, expressed	IMGA|Medtr5g097580.1	Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like protein chr5 41711192-41715991 F EGN_Mt100125 20111014	GO:0008283|cell proliferation	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding GO:0003727|single-stranded RNA binding	GO:0005737|cytoplasm
pt2_06151	C	C2S	Potri.002G115300	Potri.002G115300(CS) Potri.002G115100(CS)	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0009737|response to abscisic acid stimulus GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009965|leaf morphogenesis GO:0010162|seed dormancy process GO:0048366|leaf development	GO:0005524|ATP binding GO:0016818|hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	GO:0005634|nucleus
pt2_06152	A	A1S	Potri.002G115200	Potri.002G115200(AS)	POPTR_0002s11600	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06153	B	B1S	Potri.002G115400	Potri.002G115400(BS)	POPTR_0002s11610	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06154	A	A1S	Potri.002G115500	Potri.002G115500(AS)	POPTR_0002s11620	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008380|RNA splicing	GO:0070063|RNA polymerase binding	GO:0005634|nucleus GO:0005829|cytosol GO:0005886|plasma membrane GO:0016592|mediator complex
pt2_06155	A	A1S	Potri.002G115600	Potri.002G115600(AS)	POPTR_0002s11630	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06156	A	A1S	Potri.002G115700	Potri.002G115700(AS)	POPTR_0002s11640	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06157	A	A1S	Potri.002G115800	Potri.002G115800(AS)	POPTR_0002s11650	NA	NA	AT1G59540.1	| Symbols: ZCF125 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:21874083-21879382 FORWARD LENGTH=823	NA	NA	NA	NA	GO:0000226|microtubule cytoskeleton organization GO:0000280|nuclear division GO:0006260|DNA replication GO:0006270|DNA replication initiation GO:0006275|regulation of DNA replication GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0006346|methylation-dependent chromatin silencing GO:0008283|cell proliferation GO:0009909|regulation of flower development GO:0010389|regulation of G2/M transition of mitotic cell cycle GO:0016458|gene silencing GO:0016570|histone modification GO:0016572|histone phosphorylation GO:0031047|gene silencing by RNA GO:0031048|chromatin silencing by small RNA GO:0034968|histone lysine methylation GO:0042023|DNA endoreduplication GO:0048449|floral organ formation GO:0051225|spindle assembly GO:0051567|histone H3-K9 methylation GO:0051726|regulation of cell cycle	GO:0003777|microtubule motor activity GO:0005524|ATP binding	GO:0005737|cytoplasm
pt2_06158	A	A1S	Potri.002G115900	Potri.002G115900(AS)	POPTR_0002s11660	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0009410|response to xenobiotic stimulus GO:0030968|endoplasmic reticulum unfolded protein response	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_06159	B	B1S	Potri.014G013500	Potri.014G013500(BS)	POPTR_0002s11670	sp|Q801S4|K0930_XENLA	Uncharacterized protein KIAA0930 homolog OS=Xenopus laevis PE=2 SV=2	AT1G59520.1	| Symbols: CW7 | CW7 | chr1:21861589-21866016 FORWARD LENGTH=388	LOC_Os07g14514.4	protein|retrotransposon protein, putative, unclassified, expressed	IMGA|contig_136258_1.1	Unknown protein contig_136258 57-1285 H PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_06160	A	A1S	Potri.002G116200	Potri.002G116200(AS)	POPTR_0002s11680	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_06161	A	A1S	Potri.002G116300	Potri.002G116300(AS)	POPTR_0002s11690	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008283|cell proliferation GO:0009887|organ morphogenesis GO:0030154|cell differentiation	GO:0008083|growth factor activity	GO:0005576|extracellular region GO:0005794|Golgi apparatus GO:0031012|extracellular matrix
pt2_06162	R	R	NA	NA	POPTR_0002s11700	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06163	A	A1S	Potri.002G116500	Potri.002G116500(AS)	POPTR_0002s11710	sp|Q058P4|PUB30_ARATH	U-box domain-containing protein 30 OS=Arabidopsis thaliana GN=PUB30 PE=2 SV=1	AT3G49810.1	| Symbols: | ARM repeat superfamily protein | chr3:18474936-18476282 REVERSE LENGTH=448	LOC_Os03g13010.1	protein|U-box domain containing protein, expressed	IMGA|Medtr5g015210.1	U-box domain-containing protein chr5 4982044-4977159 E EGN_Mt100125 20111014	GO:0016567|protein ubiquitination	GO:0004842|ubiquitin-protein ligase activity	GO:0000151|ubiquitin ligase complex GO:0005737|cytoplasm
pt2_06164	A	A1S	Potri.002G116600	Potri.002G116600(AS)	POPTR_0002s11720	sp|Q058P4|PUB30_ARATH	U-box domain-containing protein 30 OS=Arabidopsis thaliana GN=PUB30 PE=2 SV=1	AT3G49810.1	| Symbols: | ARM repeat superfamily protein | chr3:18474936-18476282 REVERSE LENGTH=448	LOC_Os03g13010.1	protein|U-box domain containing protein, expressed	IMGA|Medtr5g015210.1	U-box domain-containing protein chr5 4982044-4977159 E EGN_Mt100125 20111014	GO:0016567|protein ubiquitination	GO:0004842|ubiquitin-protein ligase activity	GO:0000151|ubiquitin ligase complex GO:0005737|cytoplasm
pt2_06165	A	A1S	Potri.002G116600	Potri.002G116600(AS)	POPTR_0002s11730	sp|Q058P4|PUB30_ARATH	U-box domain-containing protein 30 OS=Arabidopsis thaliana GN=PUB30 PE=2 SV=1	AT3G49810.1	| Symbols: | ARM repeat superfamily protein | chr3:18474936-18476282 REVERSE LENGTH=448	LOC_Os03g13010.1	protein|U-box domain containing protein, expressed	IMGA|Medtr5g015210.1	U-box domain-containing protein chr5 4982044-4977159 E EGN_Mt100125 20111014	GO:0016567|protein ubiquitination	GO:0004842|ubiquitin-protein ligase activity	GO:0000151|ubiquitin ligase complex GO:0005737|cytoplasm
pt2_06166	A	A1S	Potri.002G116700	Potri.002G116700(AS)	POPTR_0002s11740	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006629|lipid metabolic process GO:0016556|mRNA modification GO:0030003|cellular cation homeostasis GO:0070838|divalent metal ion transport	GO:0004607|phosphatidylcholine-sterol O-acyltransferase activity GO:0008374|O-acyltransferase activity	GO:0005576|extracellular region GO:0005773|vacuole GO:0005774|vacuolar membrane
pt2_06167	A	A3S	Potri.002G116800	Potri.002G116800(AS) Potri.002G146500(AS) Potri.014G068400(BS)	POPTR_0002s11750	sp|Q9LPC1|GAE2_ARATH	UDP-glucuronate 4-epimerase 2 OS=Arabidopsis thaliana GN=GAE2 PE=2 SV=1	AT1G02000.1	| Symbols: GAE2 | UDP-D-glucuronate 4-epimerase 2 | chr1:346052-347356 FORWARD LENGTH=434	LOC_Os03g14540.1	protein|UDP-glucuronate 4-epimerase, putative, expressed	IMGA|Medtr5g011940.1	UDP-glucuronate 4-epimerase chr5 3278323-3276221 H EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0009225|nucleotide-sugar metabolic process GO:0044237|cellular metabolic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0016857|racemase and epimerase activity, acting on carbohydrates and derivatives GO:0050378|UDP-glucuronate 4-epimerase activity GO:0050662|coenzyme binding	GO:0005794|Golgi apparatus
pt2_06168	G	G1	NA	NA	POPTR_0002s11760	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06169	A	A2S	Potri.002G116900	Potri.002G116900(AS) Potri.002G146600(BS)	POPTR_0002s11770	sp|P35686|RS20_ORYSJ	40S ribosomal protein S20 OS=Oryza sativa subsp. japonica GN=RPS20 PE=2 SV=2	AT3G47370.3	| Symbols: | Ribosomal protein S10p/S20e family protein | chr3:17453671-17454437 REVERSE LENGTH=122	LOC_Os06g04290.1	protein|S10/S20 domain containing ribosomal protein, putative, expressed	NA	NA	GO:0006412|translation	GO:0003723|RNA binding GO:0003735|structural constituent of ribosome	GO:0005618|cell wall GO:0005622|intracellular GO:0005840|ribosome GO:0009507|chloroplast GO:0015935|small ribosomal subunit GO:0022627|cytosolic small ribosomal subunit
pt2_06170	A	A2S	Potri.002G117000	Potri.002G117000(AS) Potri.013G094500(BS)	POPTR_0002s11780	sp|Q5EAR5|TRPT1_DANRE	tRNA 2'-phosphotransferase 1 OS=Danio rerio GN=trpt1 PE=2 SV=2	AT2G45330.2	| Symbols: emb1067 | RNA 2'-phosphotransferase, Tpt1 / KptA family | chr2:18686340-18687874 FORWARD LENGTH=286	LOC_Os06g04300.1	protein|tRNA 2-phosphotransferase 1, putative, expressed	NA	NA	GO:0006388|tRNA splicing, via endonucleolytic cleavage and ligation GO:0009793|embryo development ending in seed dormancy	GO:0000215|tRNA 2'-phosphotransferase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0009507|chloroplast
pt2_06171	B	B1S	Potri.002G117100	Potri.002G117100(BS)	POPTR_0002s11790	NA	NA	AT1G58420.1	| Symbols: | Uncharacterised conserved protein UCP031279 | chr1:21707407-21707946 FORWARD LENGTH=179	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_06172	A	A1S	Potri.002G117200	Potri.002G117200(AS)	POPTR_0002s11800	sp|Q43207|FKB70_WHEAT	70 kDa peptidyl-prolyl isomerase OS=Triticum aestivum GN=FKBP70 PE=1 SV=1	AT5G48570.1	| Symbols: ROF2, ATFKBP65, FKBP65 | FKBP-type peptidyl-prolyl cis-trans isomerase family protein | chr5:19690746-19693656 REVERSE LENGTH=578	LOC_Os08g41390.2	protein|peptidyl-prolyl isomerase, putative, expressed	IMGA|Medtr1g017870.1	70 kDa peptidyl-prolyl isomerase chr1 5194150-5200002 E EGN_Mt100125 20111014	GO:0000413|protein peptidyl-prolyl isomerization GO:0006457|protein folding GO:0006499|N-terminal protein myristoylation GO:0009408|response to heat GO:0009644|response to high light intensity GO:0018208|peptidyl-proline modification GO:0034976|response to endoplasmic reticulum stress GO:0042542|response to hydrogen peroxide GO:0070370|cellular heat acclimation	GO:0003755|peptidyl-prolyl cis-trans isomerase activity GO:0005515|protein binding GO:0005516|calmodulin binding GO:0005528|FK506 binding	GO:0005634|nucleus GO:0005773|vacuole GO:0016020|membrane
pt2_06173	A	A1S	Potri.002G117300	Potri.002G117300(AS)	POPTR_0002s11810	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06174	D	D1S	Potri.002G117400	Potri.002G117400(DS)	POPTR_0002s11820	sp|Q9SY55|ECA3_ARATH	Calcium-transporting ATPase 3, endoplasmic reticulum-type OS=Arabidopsis thaliana GN=ECA3 PE=2 SV=3	AT1G10130.1	| Symbols: ECA3, ATECA3 | endoplasmic reticulum-type calcium-transporting ATPase 3 | chr1:3311139-3321941 FORWARD LENGTH=998	LOC_Os03g52090.1	protein|calcium-transporting ATPase 3, endoplasmic reticulum-type, putative, expressed	IMGA|Medtr5g015590.1	"Calcium-transporting ATPase 2, plasma membrane-type" chr5 5159662-5165001 E EGN_Mt100125 20111014	GO:0006754|ATP biosynthetic process GO:0006812|cation transport GO:0006816|calcium ion transport GO:0006828|manganese ion transport GO:0006891|intra-Golgi vesicle-mediated transport GO:0006944|cellular membrane fusion GO:0008152|metabolic process GO:0048364|root development GO:0055071|manganese ion homeostasis	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0005388|calcium-transporting ATPase activity GO:0005516|calmodulin binding GO:0005524|ATP binding GO:0015410|manganese-transporting ATPase activity GO:0015662|ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism GO:0016820|hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances GO:0046872|metal ion binding	GO:0005634|nucleus GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0012505|endomembrane system
pt2_06175	A	A1S	Potri.002G117500	Potri.002G117500(AS)	POPTR_0002s11830	sp|Q8R2N2|CIR1A_MOUSE	Cirhin OS=Mus musculus GN=Cirh1a PE=2 SV=3	AT4G07410.1	| Symbols: | Transducin family protein / WD-40 repeat family protein | chr4:4201465-4205136 REVERSE LENGTH=815	LOC_Os03g52470.1	protein|WD domain, G-beta repeat domain containing protein, expressed	IMGA|Medtr1g017880.1	"WD repeat-containing protein, putative" chr1 5201756-5208875 E EGN_Mt100125 20111014	GO:0009790|embryo development GO:0010073|meristem maintenance GO:0010305|leaf vascular tissue pattern formation GO:0010311|lateral root formation GO:0010449|root meristem growth GO:0035266|meristem growth GO:0048366|leaf development GO:0048569|post-embryonic organ development GO:2000012|regulation of auxin polar transport	GO:0000166|nucleotide binding	GO:0005634|nucleus
pt2_06176	A	A1S	Potri.002G117600	Potri.002G117600(AS)	POPTR_0002s11840	NA	NA	AT4G33800.1	| Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:16210404-16211307 REVERSE LENGTH=170	NA	NA	IMGA|Medtr5g005230.1	hypothetical protein chr5 99039-100032 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06177	A	A1S	Potri.002G117700	Potri.002G117700(AS)	POPTR_0002s11850	NA	NA	AT1G27461.1	| Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr1:9537948-9539012 REVERSE LENGTH=354	LOC_Os07g39700.1	protein|expressed protein	NA	NA	NA	NA	NA
pt2_06178	A	A1S	Potri.002G117800	Potri.002G117800(AS)	POPTR_0002s11860	sp|Q9FJW4|NDUS4_ARATH	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Arabidopsis thaliana GN=FRO1 PE=2 SV=1	AT5G67590.1	| Symbols: FRO1 | NADH-ubiquinone oxidoreductase-related | chr5:26958073-26959356 FORWARD LENGTH=154	LOC_Os07g39710.1	protein|NADH dehydrogenase iron-sulfur protein 4, mitochondrial precursor, putative, expressed	NA	NA	GO:0006096|glycolysis GO:0006511|ubiquitin-dependent protein catabolic process GO:0006833|water transport GO:0006970|response to osmotic stress GO:0006972|hyperosmotic response GO:0007030|Golgi organization GO:0009266|response to temperature stimulus GO:0009631|cold acclimation GO:0009651|response to salt stress GO:0009853|photorespiration GO:0022900|electron transport chain GO:0046686|response to cadmium ion GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	GO:0008137|NADH dehydrogenase (ubiquinone) activity GO:0016651|oxidoreductase activity, acting on NADH or NADPH GO:0050897|cobalt ion binding	GO:0005739|mitochondrion GO:0005743|mitochondrial inner membrane GO:0005747|mitochondrial respiratory chain complex I
pt2_06179	A	A1S	Potri.002G117900	Potri.002G117900(AS)	POPTR_0002s11870	sp|Q84WW1|FB140_ARATH	F-box protein At3g12350 OS=Arabidopsis thaliana GN=At3g12350 PE=2 SV=1	AT3G12350.1	| Symbols: | F-box family protein | chr3:3931626-3933104 FORWARD LENGTH=422	LOC_Os12g32630.1	protein|OsFBX448 - F-box domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_06180	A	A1S	Potri.002G118000	Potri.002G118000(AS)	POPTR_0002s11880	sp|P29675|SF3_HELAN	Pollen-specific protein SF3 OS=Helianthus annuus GN=SF3 PE=2 SV=1	AT1G10200.1	| Symbols: WLIM1 | GATA type zinc finger transcription factor family protein | chr1:3346677-3347763 REVERSE LENGTH=190	LOC_Os12g32620.1	protein|OsWLIM1 - LIM domain protein, putative actin-binding protein and transcription factor, expressed	IMGA|Medtr1g017950.1	Transcription factor lim1 chr1 5236878-5235441 F EGN_Mt100125 20111014	GO:0006944|cellular membrane fusion GO:0051017|actin filament bundle assembly	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding GO:0051015|actin filament binding	GO:0005737|cytoplasm GO:0005886|plasma membrane GO:0015629|actin cytoskeleton
pt2_06181	D	D1S	Potri.002G118100	Potri.002G118100(DS)	POPTR_0002s11890	sp|Q8VEJ1|GPN2_MOUSE	GPN-loop GTPase 2 OS=Mus musculus GN=Gpn2 PE=2 SV=2	AT5G22370.2	| Symbols: EMB1705, QQT1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:7406587-7408509 FORWARD LENGTH=298	LOC_Os02g34950.1	protein|ATP binding protein, putative, expressed	IMGA|Medtr5g089950.1	GPN-loop GTPase chr5 38089114-38094544 H EGN_Mt100125 20111014	GO:0007346|regulation of mitotic cell cycle GO:0009790|embryo development GO:0009793|embryo development ending in seed dormancy	GO:0000166|nucleotide binding GO:0005524|ATP binding	GO:0005634|nucleus GO:0005874|microtubule
pt2_06182	A	A1S	Potri.002G118200	Potri.002G118200(AS)	POPTR_0002s11900	NA	NA	AT1G59590.1	| Symbols: ZCF37 | ZCF37 | chr1:21887860-21888495 FORWARD LENGTH=211	NA	NA	IMGA|Medtr1g017990.1	hypothetical protein chr1 5257052-5258347 F EGN_Mt100125 20111014	NA	NA	GO:0005739|mitochondrion
pt2_06183	B	B1S	Potri.002G118300	Potri.002G118300(BS)	POPTR_0002s11910	NA	NA	AT1G59600.1	| Symbols: ZCW7 | ZCW7 | chr1:21889927-21891910 REVERSE LENGTH=324	LOC_Os07g39730.2	protein|ZCW7, putative, expressed	IMGA|Medtr1g018000.1	"Splicing factor, arginine/serine-rich 17B" chr1 5264621-5260631 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06184	A	A1S	Potri.002G118400	Potri.002G118400(AS)	POPTR_0002s11920	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006499|N-terminal protein myristoylation GO:0006661|phosphatidylinositol biosynthetic process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_06185	A	A1S	Potri.002G118500	Potri.002G118500(AS)	POPTR_0002s11930	sp|Q86TV6|TTC7B_HUMAN	Tetratricopeptide repeat protein 7B OS=Homo sapiens GN=TTC7B PE=1 SV=3	AT1G27460.1	| Symbols: NPGR1 | no pollen germination related 1 | chr1:9534977-9537424 FORWARD LENGTH=694	LOC_Os03g10350.1	protein|NPGR1, putative, expressed	IMGA|Medtr1g075480.2	Tetratricopeptide repeat protein 7B chr1 19160372-19156477 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0005516|calmodulin binding	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_06186	A	A1S	Potri.002G118600	Potri.002G118600(AS)	POPTR_0002s11940	NA	NA	AT5G58610.1	| Symbols: | PHD finger transcription factor, putative | chr5:23686771-23691053 REVERSE LENGTH=1065	LOC_Os07g49290.1	protein|PHD finger family protein, putative, expressed	IMGA|Medtr5g071340.1	Chromodomain helicase-DNA-binding protein chr5 29294437-29300452 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006499|N-terminal protein myristoylation GO:0010200|response to chitin GO:0042991|transcription factor import into nucleus	GO:0003677|DNA binding GO:0003723|RNA binding GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_06187	A	A1S	Potri.002G118700	Potri.002G118700(AS)	POPTR_0002s11950	sp|Q9FHS6|FK119_ARATH	F-box/kelch-repeat protein At5g43190 OS=Arabidopsis thaliana GN=At5g43190 PE=2 SV=1	AT5G43190.1	| Symbols: | Galactose oxidase/kelch repeat superfamily protein | chr5:17340300-17341511 REVERSE LENGTH=403	LOC_Os04g57290.1	protein|OsFBX153 - F-box domain containing protein, expressed	IMGA|Medtr1g018140.1	F-box/kelch-repeat protein chr1 5321626-5322774 E EGN_Mt100125 20111014	GO:0006511|ubiquitin-dependent protein catabolic process GO:0006865|amino acid transport GO:0006869|lipid transport GO:0015824|proline transport	GO:0004842|ubiquitin-protein ligase activity	GO:0005634|nucleus
pt2_06188	A	A1S	Potri.002G118800	Potri.002G118800(AS)	POPTR_0002s11960	sp|O22193|PUB4_ARATH	U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4 PE=1 SV=3	AT3G01400.1	| Symbols: | ARM repeat superfamily protein | chr3:151920-152987 FORWARD LENGTH=355	LOC_Os03g32100.1	protein|spotted leaf 11, putative, expressed	IMGA|Medtr1g018180.1	U-box domain-containing protein chr1 5337907-5335895 F EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_06189	A	A1S	Potri.002G118900	Potri.002G118900(AS)	POPTR_0002s11970	sp|O07015|RSBQ_BACSU	Sigma factor sigB regulation protein rsbQ OS=Bacillus subtilis (strain 168) GN=rsbQ PE=1 SV=1	AT3G03990.1	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr3:1033788-1034591 FORWARD LENGTH=267	LOC_Os03g10620.2	protein|hydrolase, alpha/beta fold family domain containing protein, expressed	IMGA|Medtr1g018320.1	Sigma factor sigB regulation protein rsbQ chr1 5406772-5408051 F EGN_Mt100125 20111014	GO:0009611|response to wounding GO:0009805|coumarin biosynthetic process GO:0015824|proline transport	GO:0003824|catalytic activity	GO:0005737|cytoplasm
pt2_06190	A	A1S	Potri.002G119000	Potri.002G119000(AS)	POPTR_0002s11980	sp|Q2QMW1|CCD52_ORYSJ	Cyclin-D5-2 OS=Oryza sativa subsp. japonica GN=CYCD5-2 PE=2 SV=1	AT4G34160.1	| Symbols: CYCD3;1, CYCD3 | CYCLIN D3;1 | chr4:16357903-16359304 FORWARD LENGTH=376	LOC_Os12g39830.1	protein|cyclin, putative, expressed	IMGA|Medtr5g015670.1	Cyclin-D5-1 chr5 5207520-5205999 H EGN_Mt100125 20111014	GO:0000280|nuclear division GO:0006275|regulation of DNA replication GO:0009735|response to cytokinin stimulus GO:0009741|response to brassinosteroid stimulus GO:0009744|response to sucrose stimulus GO:0010075|regulation of meristem growth GO:0010103|stomatal complex morphogenesis GO:0010389|regulation of G2/M transition of mitotic cell cycle GO:0010583|response to cyclopentenone GO:0042023|DNA endoreduplication GO:0042127|regulation of cell proliferation GO:0048316|seed development GO:0051225|spindle assembly GO:0051726|regulation of cell cycle	GO:0005515|protein binding GO:0016538|cyclin-dependent protein kinase regulator activity	GO:0005634|nucleus
pt2_06191	B	B1S	Potri.002G119100	Potri.002G119100(BS)	POPTR_0002s11990	sp|Q5S1U6|IFRD1_PIG	Interferon-related developmental regulator 1 OS=Sus scrofa GN=IFRD1 PE=2 SV=1	AT1G27760.3	| Symbols: SAT32, ATSAT32 | interferon-related developmental regulator family protein / IFRD protein family | chr1:9668895-9671322 FORWARD LENGTH=441	LOC_Os07g39900.1	protein|interferon-related developmental regulator, putative, expressed	IMGA|contig_163166_1.1	Interferon-related developmental regulator family protein contig_163166 2287-316 E PREDN 20111014	GO:0009651|response to salt stress	NA	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_06192	A	A1S	Potri.002G119200	Potri.002G119200(AS)	POPTR_0002s12000	sp|Q84WK0|BH085_ARATH	Transcription factor bHLH85 OS=Arabidopsis thaliana GN=BHLH85 PE=2 SV=1	AT4G33880.1	| Symbols: RSL2 | ROOT HAIR DEFECTIVE 6-LIKE 2 | chr4:16239566-16241052 REVERSE LENGTH=352	LOC_Os12g39850.1	protein|helix-loop-helix DNA-binding domain containing protein, expressed	IMGA|contig_61887_1.1	BHLH transcription factor contig_61887 2768-594 H PREDN 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009733|response to auxin stimulus GO:0016049|cell growth GO:0048766|root hair initiation	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_06193	A	A1S	Potri.002G119300	Potri.002G119300(AS)	POPTR_0002s12010	sp|Q96289|ZAT10_ARATH	Zinc finger protein ZAT10 OS=Arabidopsis thaliana GN=ZAT10 PE=2 SV=1	AT1G27730.1	| Symbols: STZ, ZAT10 | salt tolerance zinc finger | chr1:9648302-9648985 REVERSE LENGTH=227	LOC_Os12g39400.1	protein|ZOS12-09 - C2H2 zinc finger protein, expressed	IMGA|contig_55524_1.1	Zinc-finger protein contig_55524 1775-2990 F PREDN 20111014	GO:0002679|respiratory burst involved in defense response GO:0006979|response to oxidative stress GO:0007165|signal transduction GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009611|response to wounding GO:0009612|response to mechanical stimulus GO:0009620|response to fungus GO:0009644|response to high light intensity GO:0009651|response to salt stress GO:0009695|jasmonic acid biosynthetic process GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009753|response to jasmonic acid stimulus GO:0009873|ethylene mediated signaling pathway GO:0010117|photoprotection GO:0010200|response to chitin GO:0015979|photosynthesis GO:0035264|multicellular organism growth GO:0035556|intracellular signal transduction GO:0042538|hyperosmotic salinity response GO:0045892|negative regulation of transcription, DNA-dependent	GO:0003676|nucleic acid binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_06194	A	A1S	Potri.002G119400	Potri.002G119400(AS)	POPTR_0002s12020	sp|Q9SZE8|LBD39_ARATH	LOB domain-containing protein 39 OS=Arabidopsis thaliana GN=LBD39 PE=2 SV=1	AT4G37540.1	| Symbols: LBD39 | LOB domain-containing protein 39 | chr4:17639649-17640509 REVERSE LENGTH=240	LOC_Os03g33090.1	protein|DUF260 domain containing protein, putative, expressed	IMGA|Medtr5g015880.1	LOB domain-containing protein chr5 5330428-5331438 F EGN_Mt100125 20111014	GO:0008150|biological_process GO:0010167|response to nitrate GO:0015706|nitrate transport	NA	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06195	A	A1S	Potri.002G119500	Potri.002G119500(AS)	POPTR_0002s12030	NA	NA	AT1G49890.1	| Symbols: QWRF2 | Family of unknown function (DUF566) | chr1:18470282-18473463 FORWARD LENGTH=659	LOC_Os03g10820.1	protein|expressed protein	IMGA|Medtr1g018440.1	hypothetical protein chr1 5485437-5481464 H EGN_Mt100125 20111014	NA	NA	GO:0005634|nucleus
pt2_06196	A	A1S	Potri.002G119500	Potri.002G119500(AS)	POPTR_0002s12030	NA	NA	AT1G49890.1	| Symbols: QWRF2 | Family of unknown function (DUF566) | chr1:18470282-18473463 FORWARD LENGTH=659	LOC_Os03g10820.1	protein|expressed protein	IMGA|Medtr1g018440.1	hypothetical protein chr1 5485437-5481464 H EGN_Mt100125 20111014	NA	NA	GO:0005634|nucleus
pt2_06197	B	B1S	Potri.002G119500	Potri.002G119500(BS)	POPTR_0002s12030	NA	NA	AT1G49890.1	| Symbols: QWRF2 | Family of unknown function (DUF566) | chr1:18470282-18473463 FORWARD LENGTH=659	LOC_Os03g10820.1	protein|expressed protein	IMGA|Medtr1g018440.1	hypothetical protein chr1 5485437-5481464 H EGN_Mt100125 20111014	NA	NA	GO:0005634|nucleus
pt2_06198	A	A1S	Potri.002G119600	Potri.002G119600(AS)	POPTR_0002s12040	sp|Q5I7K3|RS29_WHEAT	40S ribosomal protein S29 OS=Triticum aestivum GN=RPS29 PE=1 SV=1	AT4G33865.1	| Symbols: | Ribosomal protein S14p/S29e family protein | chr4:16233395-16234114 REVERSE LENGTH=56	LOC_Os11g41610.1	protein|40S ribosomal protein S29, putative, expressed	IMGA|Medtr5g005130.1	40S ribosomal protein S29 chr5 62072-60663 F EGN_Mt100125 20111014	GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005840|ribosome GO:0022627|cytosolic small ribosomal subunit
pt2_06199	A	A1S	Potri.002G119700	Potri.002G119700(AS)	POPTR_0002s12050	NA	NA	AT5G43150.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:17325076-17325689 FORWARD LENGTH=91	NA	NA	NA	NA	GO:0008150|biological_process GO:0015996|chlorophyll catabolic process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_06200	A	A2S	Potri.002G119800	Potri.002G119800(AS) Potri.002G119900(AA)	POPTR_0002s12060	NA	NA	AT2G26680.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Methyltransferase FkbM (InterPro:IPR006342); Has 1073 Blast hits to 1073 proteins in 243 species: Archae - 45; Bacteria - 509; Metazoa - 0; Fungi - 4; Plants - 60; Viruses - 4; Other Eukaryotes - 451 (source: NCBI BLink). | chr2:11344003-11345288 REVERSE LENGTH=319	LOC_Os03g36910.1	protein|SAM-dependent methyltransferase, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005794|Golgi apparatus GO:0005886|plasma membrane
pt2_06201	A	A2S	Potri.002G119900	Potri.002G119900(AS) Potri.002G119800(AA)	POPTR_0002s12070	NA	NA	AT5G43130.1	| Symbols: TAF4, TAF4B | TBP-associated factor 4 | chr5:17315608-17321144 REVERSE LENGTH=823	LOC_Os03g32590.1	protein|transcription initiation factor, putative, expressed	IMGA|contig_166692_1.1	Transcription initiation factor contig_166692 237-2214 E PREDN 20111014	GO:0006352|DNA-dependent transcription, initiation GO:0009630|gravitropism	NA	GO:0005634|nucleus GO:0005669|transcription factor TFIID complex
pt2_06202	A	A1S	Potri.002G119900	Potri.002G119900(AS)	POPTR_0002s12080	NA	NA	AT5G43130.1	| Symbols: TAF4, TAF4B | TBP-associated factor 4 | chr5:17315608-17321144 REVERSE LENGTH=823	LOC_Os03g32590.1	protein|transcription initiation factor, putative, expressed	IMGA|contig_166692_1.1	Transcription initiation factor contig_166692 237-2214 E PREDN 20111014	GO:0006352|DNA-dependent transcription, initiation GO:0009630|gravitropism	NA	GO:0005634|nucleus GO:0005669|transcription factor TFIID complex
pt2_06203	A	A1S	Potri.002G120000	Potri.002G120000(AS)	POPTR_0002s12090	sp|Q08466|CSK22_ARATH	Casein kinase II subunit alpha-2 OS=Arabidopsis thaliana GN=CKA2 PE=2 SV=3	AT3G50000.1	| Symbols: CKA2, ATCKA2 | casein kinase II, alpha chain 2 | chr3:18534487-18536743 FORWARD LENGTH=403	LOC_Os07g02350.1	protein|casein kinase II subunit alpha-2, putative, expressed	IMGA|Medtr5g015830.1	Casein kinase II alpha subunit chr5 5303883-5297534 E EGN_Mt100125 20111014	GO:0006281|DNA repair GO:0006325|chromatin organization GO:0006468|protein phosphorylation GO:0007623|circadian rhythm GO:0009612|response to mechanical stimulus GO:0010225|response to UV-C GO:0010332|response to gamma radiation GO:0019722|calcium-mediated signaling GO:0051726|regulation of cell cycle GO:2001020|regulation of response to DNA damage stimulus	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus
pt2_06204	A	A2S	Potri.002G120100	Potri.002G120100(AS) Potri.014G018100(DS)	POPTR_0002s12100	sp|O64818|Y2309_ARATH	Uncharacterized protein At2g23090 OS=Arabidopsis thaliana GN=At2g23090 PE=1 SV=1	AT2G23090.1	| Symbols: | Uncharacterised protein family SERF | chr2:9829657-9830274 REVERSE LENGTH=78	LOC_Os07g02340.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_06205	A	A1S	Potri.002G120200	Potri.002G120200(AS)	POPTR_0002s12110	sp|Q9STX1|ACBP3_ARATH	Acyl-CoA-binding domain-containing protein 3 OS=Arabidopsis thaliana GN=ACBP3 PE=1 SV=1	AT4G24230.1	| Symbols: ACBP3 | acyl-CoA-binding domain 3 | chr4:12567122-12568754 REVERSE LENGTH=364	LOC_Os03g14000.1	protein|acyl CoA binding protein, putative, expressed	NA	NA	GO:0006952|defense response GO:0009617|response to bacterium GO:0009646|response to absence of light GO:0015908|fatty acid transport GO:0042742|defense response to bacterium GO:0050832|defense response to fungus	GO:0000062|fatty-acyl-CoA binding	GO:0005576|extracellular region GO:0005615|extracellular space
pt2_06206	A	A1S	Potri.002G120300	Potri.002G120300(AS)	POPTR_0002s12120	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06207	A	A1S	Potri.002G120400	Potri.002G120400(AS)	POPTR_0002s12130	sp|O65351|SUBL_ARATH	Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1	AT5G67360.1	| Symbols: ARA12 | Subtilase family protein | chr5:26872192-26874465 REVERSE LENGTH=757	LOC_Os03g40830.1	protein|OsSub30 - Putative Subtilisin homologue, expressed	IMGA|Medtr5g016120.1	Subtilisin-like protease chr5 5470271-5467977 H EGN_Mt100125 20111014	GO:0006508|proteolysis GO:0010214|seed coat development GO:0043086|negative regulation of catalytic activity GO:0048359|mucilage metabolic process involved seed coat development GO:0080001|mucilage extrusion from seed coat	GO:0004252|serine-type endopeptidase activity GO:0042802|identical protein binding	GO:0005576|extracellular region GO:0005618|cell wall GO:0009505|plant-type cell wall GO:0048046|apoplast
pt2_06208	A	A1S	Potri.002G120500	Potri.002G120500(AS)	POPTR_0002s12140	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_06209	A	A1S	Potri.002G120600	Potri.002G120600(AS)	POPTR_0002s12150	sp|O74913|YJ72_SCHPO	Uncharacterized protein C757.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.02c PE=2 SV=1	AT4G24220.1	| Symbols: VEP1, AWI31 | NAD(P)-binding Rossmann-fold superfamily protein | chr4:12565219-12566474 FORWARD LENGTH=388	LOC_Os03g32170.1	protein|NAD dependent epimerase/dehydratase family protein, putative, expressed	IMGA|AC232874_1008.1	Progesterone 5-beta-reductase AC232874.5 28530-26963 F EGN_Mt100125 20111014	GO:0008202|steroid metabolic process GO:0009611|response to wounding GO:0010051|xylem and phloem pattern formation	GO:0000166|nucleotide binding GO:0035671|enone reductase activity	GO:0005829|cytosol
pt2_06210	G	G1	NA	NA	POPTR_0002s12160	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06211	A	A2S	Potri.002G120700	Potri.002G120700(AS) Potri.014G019700(DS)	POPTR_0002s12170	sp|O74913|YJ72_SCHPO	Uncharacterized protein C757.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.02c PE=2 SV=1	AT4G24220.1	| Symbols: VEP1, AWI31 | NAD(P)-binding Rossmann-fold superfamily protein | chr4:12565219-12566474 FORWARD LENGTH=388	LOC_Os03g32170.1	protein|NAD dependent epimerase/dehydratase family protein, putative, expressed	IMGA|AC232874_1005.1	Progesterone 5-beta-reductase AC232874.5 20170-15984 E EGN_Mt100125 20111014	GO:0008202|steroid metabolic process GO:0009611|response to wounding GO:0010051|xylem and phloem pattern formation	GO:0000166|nucleotide binding GO:0035671|enone reductase activity	GO:0005829|cytosol
pt2_06212	A	A1S	Potri.002G120800	Potri.002G120800(AS)	POPTR_0002s12180	NA	NA	AT5G43120.1	| Symbols: | ARM-repeat/Tetratricopeptide repeat (TPR)-like protein | chr5:17312602-17314368 FORWARD LENGTH=588	LOC_Os05g34820.1	protein|expressed protein	IMGA|AC232874_1013.1	Tetratricopeptide repeat protein AC232874.5 43675-41423 E EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06213	A	A1S	Potri.002G120900	Potri.002G120900(AS)	POPTR_0002s12190	sp|Q9LVC3|PUM12_ARATH	Pumilio homolog 12 OS=Arabidopsis thaliana GN=APUM12 PE=2 SV=2	AT5G56510.1	| Symbols: APUM12, PUM12 | pumilio 12 | chr5:22881721-22883842 FORWARD LENGTH=596	LOC_Os12g31000.1	protein|pumilio-family RNA binding repeat domain containing protein, expressed	IMGA|AC232874_1016.1	Pumilio domain-containing protein AC232874.5 60725-56068 E EGN_Mt100125 20111014	NA	GO:0003723|RNA binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_06214	A	A1S	Potri.002G121000	Potri.002G121000(AS)	POPTR_0002s12200	sp|Q9C6B2|NRAM2_ARATH	Metal transporter Nramp2 OS=Arabidopsis thaliana GN=NRAMP2 PE=2 SV=1	AT1G47240.1	| Symbols: NRAMP2, ATNRAMP2 | NRAMP metal ion transporter 2 | chr1:17309043-17311308 REVERSE LENGTH=530	LOC_Os12g39180.1	protein|natural resistance-associated macrophage protein, putative, expressed	IMGA|AC232874_1019.1	Natural resistance-associated macrophage protein AC232874.5 76731-72335 E EGN_Mt100125 20111014	GO:0006810|transport GO:0006875|cellular metal ion homeostasis GO:0030001|metal ion transport	GO:0005215|transporter activity GO:0015103|inorganic anion transmembrane transporter activity GO:0046873|metal ion transmembrane transporter activity	GO:0005634|nucleus GO:0016020|membrane
pt2_06215	A	A1S	Potri.002G121000	Potri.002G121000(AS)	POPTR_0002s12200	sp|Q9C6B2|NRAM2_ARATH	Metal transporter Nramp2 OS=Arabidopsis thaliana GN=NRAMP2 PE=2 SV=1	AT1G47240.1	| Symbols: NRAMP2, ATNRAMP2 | NRAMP metal ion transporter 2 | chr1:17309043-17311308 REVERSE LENGTH=530	LOC_Os12g39180.1	protein|natural resistance-associated macrophage protein, putative, expressed	IMGA|AC232874_1019.1	Natural resistance-associated macrophage protein AC232874.5 76731-72335 E EGN_Mt100125 20111014	GO:0006810|transport GO:0006875|cellular metal ion homeostasis GO:0030001|metal ion transport	GO:0005215|transporter activity GO:0015103|inorganic anion transmembrane transporter activity GO:0046873|metal ion transmembrane transporter activity	GO:0005634|nucleus GO:0016020|membrane
pt2_06216	B	B1S	Potri.002G121100	Potri.002G121100(BS)	POPTR_0002s12210	sp|Q9FG65|C81D1_ARATH	Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CYP81D1 PE=2 SV=1	AT4G37370.1	| Symbols: CYP81D8 | cytochrome P450, family 81, subfamily D, polypeptide 8 | chr4:17569971-17571678 REVERSE LENGTH=497	LOC_Os03g55240.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g016410.1	Isoflavone 2'-hydroxylase chr5 5626688-5629619 F EGN_Mt100125 20111014	GO:0009723|response to ethylene stimulus GO:0010286|heat acclimation GO:0055114|oxidation-reduction process GO:0080167|response to karrikin	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005576|extracellular region GO:0005783|endoplasmic reticulum GO:0005886|plasma membrane
pt2_06217	A	A2S	Potri.002G121200	Potri.002G121200(AS) Potri.002G121400(DS)	POPTR_0002s12220	sp|Q9FG65|C81D1_ARATH	Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CYP81D1 PE=2 SV=1	AT4G37340.1	| Symbols: CYP81D3 | cytochrome P450, family 81, subfamily D, polypeptide 3 | chr4:17564953-17566706 REVERSE LENGTH=500	LOC_Os02g30100.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g016410.1	Isoflavone 2'-hydroxylase chr5 5626688-5629619 F EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	NA
pt2_06218	A	A1S	Potri.002G121300	Potri.002G121300(AS)	POPTR_0002s12230	sp|P93147|C81E1_GLYEC	Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata GN=CYP81E1 PE=1 SV=2	AT2G23190.1	| Symbols: CYP81D7 | cytochrome P450, family 81, subfamily D, polypeptide 7 | chr2:9877058-9879007 FORWARD LENGTH=543	LOC_Os02g30090.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g016410.1	Isoflavone 2'-hydroxylase chr5 5626688-5629619 F EGN_Mt100125 20111014	GO:0009723|response to ethylene stimulus GO:0010286|heat acclimation GO:0055114|oxidation-reduction process GO:0080167|response to karrikin	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005576|extracellular region GO:0005783|endoplasmic reticulum GO:0005886|plasma membrane
pt2_06219	A	A1S	Potri.002G008400	Potri.002G008400(AS)	POPTR_0002s12240	sp|Q9LP24|Y1571_ARATH	Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1	AT1G35710.1	| Symbols: | Protein kinase family protein with leucine-rich repeat domain | chr1:13220940-13224386 FORWARD LENGTH=1120	LOC_Os02g34790.1	protein|receptor-like protein kinase 5 precursor, putative, expressed	IMGA|Medtr1g039220.1	Receptor protein kinase-like protein chr1 10530698-10534277 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006857|oligopeptide transport GO:0006995|cellular response to nitrogen starvation GO:0009627|systemic acquired resistance GO:0031347|regulation of defense response	GO:0004672|protein kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane
pt2_06220	A	A4S	Potri.T102700	Potri.T102700(AS) Potri.002G008300(AS) Potri.002G008600(BS) Potri.005G253000(DS)	POPTR_0002s12245	NA	NA	AT1G20760.1	| Symbols: | Calcium-binding EF hand family protein | chr1:7209515-7214773 FORWARD LENGTH=1019	LOC_Os03g03830.1	protein|EF hand family protein, putative, expressed	IMGA|Medtr5g099170.1	Epidermal growth factor receptor substrate 15-like protein chr5 42431256-42442018 E EGN_Mt100125 20111014	GO:0051645|Golgi localization GO:0051646|mitochondrion localization GO:0060151|peroxisome localization	GO:0005509|calcium ion binding	GO:0005886|plasma membrane
pt2_06221	G	G4	NA	NA	POPTR_0002s12250	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06222	A	A2S	Potri.002G008100	Potri.002G008100(AS) Potri.T102800(BS)	POPTR_0002s12260	sp|Q8VZG8|Y4885_ARATH	Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=1 SV=3	AT4G08850.1	| Symbols: | Leucine-rich repeat receptor-like protein kinase family protein | chr4:5636693-5640496 REVERSE LENGTH=1045	LOC_Os10g33040.1	protein|receptor-like protein kinase precursor, putative, expressed	IMGA|Medtr5g085700.1	DNA-directed RNA polymerase subunit beta chr5 36010616-36016717 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006857|oligopeptide transport GO:0006995|cellular response to nitrogen starvation GO:0009627|systemic acquired resistance GO:0031347|regulation of defense response	GO:0004672|protein kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane
pt2_06223	B	B4S	Potri.002G008400	Potri.002G008400(BS) Potri.002G008000(DS) Potri.002G007900(DS) Potri.T103200(DS)	POPTR_0002s12270	sp|Q9LP24|Y1571_ARATH	Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1	AT1G35710.1	| Symbols: | Protein kinase family protein with leucine-rich repeat domain | chr1:13220940-13224386 FORWARD LENGTH=1120	LOC_Os02g34790.1	protein|receptor-like protein kinase 5 precursor, putative, expressed	IMGA|Medtr1g039220.1	Receptor protein kinase-like protein chr1 10530698-10534277 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006857|oligopeptide transport GO:0006995|cellular response to nitrogen starvation GO:0009627|systemic acquired resistance GO:0031347|regulation of defense response	GO:0004672|protein kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane
pt2_06224	B	B2S	Potri.002G007900	Potri.002G007900(BS) Potri.002G008400(DS)	POPTR_0002s12280	sp|Q8VZG8|Y4885_ARATH	Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=1 SV=3	AT4G08850.1	| Symbols: | Leucine-rich repeat receptor-like protein kinase family protein | chr4:5636693-5640496 REVERSE LENGTH=1045	LOC_Os01g33110.1	protein|receptor-like protein kinase 5 precursor, putative, expressed	IMGA|Medtr1g039220.1	Receptor protein kinase-like protein chr1 10530698-10534277 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006857|oligopeptide transport GO:0006995|cellular response to nitrogen starvation GO:0009627|systemic acquired resistance GO:0031347|regulation of defense response	GO:0004672|protein kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane
pt2_06225	B	B7S	Potri.T102900	Potri.T102900(BS) Potri.T102800(BS) Potri.T103000(DS) Potri.002G008400(DS) Potri.002G008000(DS) Potri.002G008100(DS) Potri.T103200(DS)	POPTR_0002s12290	sp|Q8VZG8|Y4885_ARATH	Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=1 SV=3	AT4G08850.1	| Symbols: | Leucine-rich repeat receptor-like protein kinase family protein | chr4:5636693-5640496 REVERSE LENGTH=1045	LOC_Os10g33040.1	protein|receptor-like protein kinase precursor, putative, expressed	IMGA|AC229724_1014.1	Receptor-like protein kinase AC229724.12 32051-35957 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006857|oligopeptide transport GO:0006995|cellular response to nitrogen starvation GO:0009627|systemic acquired resistance GO:0031347|regulation of defense response	GO:0004672|protein kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane
pt2_06226	A	A2S	Potri.002G121400	Potri.002G121400(AS) Potri.002G121200(DS)	POPTR_0002s12300	sp|Q9FG65|C81D1_ARATH	Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CYP81D1 PE=2 SV=1	AT4G37370.1	| Symbols: CYP81D8 | cytochrome P450, family 81, subfamily D, polypeptide 8 | chr4:17569971-17571678 REVERSE LENGTH=497	LOC_Os02g30100.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g016410.1	Isoflavone 2'-hydroxylase chr5 5626688-5629619 F EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	NA
pt2_06227	A	A1S	Potri.002G121500	Potri.002G121500(AS)	POPTR_0002s12310	sp|Q3ECW2|CCA34_ARATH	Cyclin-A3-4 OS=Arabidopsis thaliana GN=CYCA3-4 PE=1 SV=1	AT1G47230.1	| Symbols: CYCA3;4 | CYCLIN A3;4 | chr1:17306752-17308587 FORWARD LENGTH=369	LOC_Os03g41100.1	protein|cyclin, putative, expressed	IMGA|AC232874_1028.1	Cyclin A-like protein AC232874.5 111776-113507 H EGN_Mt100125 20111014	GO:0000079|regulation of cyclin-dependent protein kinase activity GO:0010389|regulation of G2/M transition of mitotic cell cycle GO:0010440|stomatal lineage progression GO:0042023|DNA endoreduplication GO:0045736|negative regulation of cyclin-dependent protein kinase activity GO:0051726|regulation of cell cycle	GO:0005515|protein binding GO:0016538|cyclin-dependent protein kinase regulator activity GO:0019901|protein kinase binding	GO:0005634|nucleus
pt2_06228	A	A1S	Potri.002G121600	Potri.002G121600(AS)	POPTR_0002s12320	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006355|regulation of transcription, DNA-dependent	GO:0003676|nucleic acid binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding GO:0046982|protein heterodimerization activity	GO:0005622|intracellular GO:0005634|nucleus
pt2_06229	A	A1S	Potri.002G121800	Potri.002G121800(AS)	POPTR_0002s12330	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06230	A	A1S	Potri.002G121900	Potri.002G121900(AS)	POPTR_0002s12340	sp|O65790|C81F1_ARATH	Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CYP81F1 PE=2 SV=2	AT5G10600.1	| Symbols: CYP81K2 | cytochrome P450, family 81, subfamily K, polypeptide 2 | chr5:3351227-3352777 FORWARD LENGTH=516	LOC_Os12g39300.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g016410.1	Isoflavone 2'-hydroxylase chr5 5626688-5629619 F EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005783|endoplasmic reticulum
pt2_06231	A	A1S	Potri.002G122000	Potri.002G122000(AS)	POPTR_0002s12350	sp|Q9M7N6|MAF1_SOLLC	MFP1 attachment factor 1 OS=Solanum lycopersicum GN=MAF1 PE=1 SV=1	AT1G47200.1	| Symbols: WPP2 | WPP domain protein 2 | chr1:17298181-17298723 REVERSE LENGTH=180	LOC_Os03g11060.1	protein|MFP1 attachment factor 1, putative, expressed	NA	NA	GO:0006913|nucleocytoplasmic transport GO:0007067|mitosis GO:0048527|lateral root development	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005640|nuclear outer membrane GO:0005829|cytosol GO:0005886|plasma membrane
pt2_06232	R	R	NA	NA	POPTR_0002s12360	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06233	A	A2S	Potri.002G122300	Potri.002G122300(AS) Potri.014G022100(DS)	POPTR_0002s12380	sp|Q9STX3|GID2_ARATH	F-box protein GID2 OS=Arabidopsis thaliana GN=GID2 PE=1 SV=1	AT4G24210.1	| Symbols: SLY1 | F-box family protein | chr4:12563658-12564113 FORWARD LENGTH=151	NA	NA	IMGA|Medtr5g097150.1	F-box protein SNE chr5 41494771-41495271 H EGN_Mt100125 20111014	GO:0009723|response to ethylene stimulus GO:0009737|response to abscisic acid stimulus GO:0009740|gibberellic acid mediated signaling pathway GO:0009845|seed germination GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009939|positive regulation of gibberellic acid mediated signaling pathway GO:0010162|seed dormancy process GO:0010325|raffinose family oligosaccharide biosynthetic process GO:0042538|hyperosmotic salinity response GO:0048444|floral organ morphogenesis	GO:0005515|protein binding	GO:0005634|nucleus GO:0019005|SCF ubiquitin ligase complex
pt2_06234	A	A1S	Potri.002G122400	Potri.002G122400(AS)	POPTR_0002s12390	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06235	A	A1S	Potri.002G122500	Potri.002G122500(AS)	POPTR_0002s12400	sp|Q54RM0|EAF3_DICDI	NuA4 complex subunit EAF3 homolog OS=Dictyostelium discoideum GN=DDB_G0283075 PE=3 SV=1	AT4G37280.1	| Symbols: | MRG family protein | chr4:17546748-17549362 REVERSE LENGTH=320	LOC_Os11g34300.3	protein|chromatin modification-related protein EAF3, putative, expressed	NA	NA	NA	NA	GO:0005634|nucleus
pt2_06236	A	A2S	Potri.002G122600	Potri.002G122600(AS) Potri.014G022500(DS)	POPTR_0002s12410	sp|Q9FDW1|MYB44_ARATH	Transcription factor MYB44 OS=Arabidopsis thaliana GN=MYB44 PE=2 SV=1	AT4G37260.1	| Symbols: MYB73, ATMYB73 | myb domain protein 73 | chr4:17540602-17541564 FORWARD LENGTH=320	LOC_Os09g01960.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr5g016510.1	R2R3-MYB transcription factor chr5 5667229-5666279 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009723|response to ethylene stimulus GO:0009737|response to abscisic acid stimulus GO:0009751|response to salicylic acid stimulus GO:0009753|response to jasmonic acid stimulus GO:0010200|response to chitin GO:0046686|response to cadmium ion	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_06237	A	A1S	Potri.002G122700	Potri.002G122700(AS)	POPTR_0002s12420	sp|O04130|SERA_ARATH	D-3-phosphoglycerate dehydrogenase, chloroplastic OS=Arabidopsis thaliana GN=At1g17745 PE=1 SV=2	AT4G34200.1	| Symbols: EDA9 | D-3-phosphoglycerate dehydrogenase | chr4:16374041-16376561 REVERSE LENGTH=603	LOC_Os04g55720.1	protein|D-3-phosphoglycerate dehydrogenase, chloroplast precursor, putative, expressed	NA	NA	GO:0006564|L-serine biosynthetic process GO:0008152|metabolic process GO:0009561|megagametogenesis GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0004617|phosphoglycerate dehydrogenase activity GO:0005524|ATP binding GO:0016597|amino acid binding GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0048037|cofactor binding GO:0051287|NAD binding	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009536|plastid GO:0009570|chloroplast stroma GO:0016020|membrane
pt2_06238	A	A1S	Potri.002G122800	Potri.002G122800(AS)	POPTR_0002s12430	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06239	A	A2S	Potri.002G122900	Potri.002G122900(AS) Potri.014G022900(DS)	POPTR_0002s12440	sp|Q8GXG1|ASPGB_ARATH	Probable isoaspartyl peptidase/L-asparaginase 2 OS=Arabidopsis thaliana GN=At3g16150 PE=2 SV=2	AT3G16150.1	| Symbols: | N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein | chr3:5471794-5473033 FORWARD LENGTH=325	LOC_Os04g55710.1	protein|transposon protein, putative, unclassified, expressed	NA	NA	GO:0006516|glycoprotein catabolic process GO:0033345|asparagine catabolic process via L-aspartate GO:0051604|protein maturation	GO:0004067|asparaginase activity GO:0016787|hydrolase activity	GO:0005737|cytoplasm
pt2_06240	A	A1S	Potri.002G123000	Potri.002G123000(AS)	POPTR_0002s12450	sp|P42753|CCD31_ARATH	Cyclin-D3-1 OS=Arabidopsis thaliana GN=CYCD3-1 PE=1 SV=3	AT4G34160.1	| Symbols: CYCD3;1, CYCD3 | CYCLIN D3;1 | chr4:16357903-16359304 FORWARD LENGTH=376	LOC_Os09g29100.1	protein|cyclin, putative, expressed	IMGA|Medtr5g032550.1	Cyclin D2 chr5 13556615-13559060 E EGN_Mt100125 20111014	GO:0000280|nuclear division GO:0006275|regulation of DNA replication GO:0009735|response to cytokinin stimulus GO:0009741|response to brassinosteroid stimulus GO:0009744|response to sucrose stimulus GO:0010075|regulation of meristem growth GO:0010103|stomatal complex morphogenesis GO:0010389|regulation of G2/M transition of mitotic cell cycle GO:0010583|response to cyclopentenone GO:0042023|DNA endoreduplication GO:0042127|regulation of cell proliferation GO:0048316|seed development GO:0051225|spindle assembly GO:0051726|regulation of cell cycle	GO:0005515|protein binding GO:0016538|cyclin-dependent protein kinase regulator activity	GO:0005634|nucleus
pt2_06241	A	A1S	Potri.002G123100	Potri.002G123100(AS)	POPTR_0002s12460	sp|Q9C626|FB37_ARATH	F-box protein At1g47056 OS=Arabidopsis thaliana GN=At1g47056 PE=2 SV=1	AT1G47056.1	| Symbols: VFB1 | VIER F-box proteine 1 | chr1:17276103-17277659 REVERSE LENGTH=518	LOC_Os04g42670.1	protein|OsFBL19 - F-box domain and LRR containing protein, expressed	NA	NA	GO:0006499|N-terminal protein myristoylation	GO:0004842|ubiquitin-protein ligase activity	GO:0005634|nucleus
pt2_06242	A	A1S	Potri.002G123200	Potri.002G123200(AS)	POPTR_0002s12470	NA	NA	AT4G34150.1	| Symbols: | Calcium-dependent lipid-binding (CaLB domain) family protein | chr4:16355035-16356955 FORWARD LENGTH=247	LOC_Os06g43190.1	protein|retrotransposon protein, putative, unclassified, expressed	NA	NA	GO:0006612|protein targeting to membrane GO:0006944|cellular membrane fusion GO:0009409|response to cold GO:0009611|response to wounding GO:0009612|response to mechanical stimulus GO:0009646|response to absence of light GO:0010200|response to chitin GO:0010363|regulation of plant-type hypersensitive response GO:0030968|endoplasmic reticulum unfolded protein response GO:0043069|negative regulation of programmed cell death GO:0052542|defense response by callose deposition	NA	GO:0005829|cytosol GO:0009506|plasmodesma
pt2_06243	A	A1S	Potri.002G123300	Potri.002G123300(AS)	POPTR_0002s12480	sp|Q9STX0|WRKY7_ARATH	Probable WRKY transcription factor 7 OS=Arabidopsis thaliana GN=WRKY7 PE=1 SV=1	AT4G24240.1	| Symbols: WRKY7, ATWRKY7 | WRKY DNA-binding protein 7 | chr4:12571930-12573446 FORWARD LENGTH=353	LOC_Os12g40570.2	protein|WRKY94, expressed	IMGA|Medtr5g016610.1	WRKY transcription factor chr5 5721691-5723310 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006457|protein folding GO:0006857|oligopeptide transport GO:0009408|response to heat GO:0009644|response to high light intensity GO:0034976|response to endoplasmic reticulum stress GO:0042542|response to hydrogen peroxide	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005516|calmodulin binding GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_06244	A	A1S	Potri.002G123400	Potri.002G123400(AS)	POPTR_0002s12490	NA	NA	AT5G47830.1	| Symbols: | unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr5:19373013-19374300 REVERSE LENGTH=173	LOC_Os02g06390.1	protein|expressed protein	IMGA|Medtr1g018930.1	hypothetical protein chr1 5733781-5737283 F EGN_Mt100125 20111014	GO:0006457|protein folding GO:0008150|biological_process GO:0009408|response to heat GO:0009644|response to high light intensity GO:0042542|response to hydrogen peroxide	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005739|mitochondrion
pt2_06245	A	A1S	Potri.002G123500	Potri.002G123500(AS)	POPTR_0002s12500	sp|O95239|KIF4A_HUMAN	Chromosome-associated kinesin KIF4A OS=Homo sapiens GN=KIF4A PE=1 SV=3	AT5G47820.2	| Symbols: FRA1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:19366505-19372229 FORWARD LENGTH=1035	LOC_Os09g02650.1	protein|kinesin motor domain containing protein, putative, expressed	IMGA|Medtr1g018940.1	Kinesin-like protein chr1 5749515-5739708 E EGN_Mt100125 20111014	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0009086|methionine biosynthetic process GO:0010075|regulation of meristem growth GO:0010215|cellulose microfibril organization	GO:0003777|microtubule motor activity GO:0005524|ATP binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_06246	G	G1	NA	NA	POPTR_0002s12505	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06247	A	A2S	Potri.002G123600	Potri.002G123600(AS) Potri.014G024800(BS)	POPTR_0002s12510	sp|Q42551|SCE1_ARATH	SUMO-conjugating enzyme SCE1 OS=Arabidopsis thaliana GN=SCE1 PE=1 SV=1	AT3G57870.1	| Symbols: AHUS5, EMB1637, SCE1, SCE1A, ATSCE1 | sumo conjugation enzyme 1 | chr3:21428831-21430110 REVERSE LENGTH=160	LOC_Os03g03130.1	protein|ubiquitin-conjugating enzyme, putative, expressed	IMGA|Medtr5g016630.1	SUMO-conjugating enzyme UBC9 chr5 5729007-5732542 F EGN_Mt100125 20111014	GO:0009737|response to abscisic acid stimulus GO:0009793|embryo development ending in seed dormancy GO:0016925|protein sumoylation	GO:0005515|protein binding GO:0016881|acid-amino acid ligase activity GO:0019789|SUMO ligase activity	GO:0005634|nucleus
pt2_06248	A	A1S	Potri.002G123700	Potri.002G123700(AS)	POPTR_0002s12520	sp|Q2V6J9|UFOG7_FRAAN	UDP-glucose flavonoid 3-O-glucosyltransferase 7 OS=Fragaria ananassa GN=GT7 PE=1 SV=1	AT4G34131.1	| Symbols: UGT73B3 | UDP-glucosyl transferase 73B3 | chr4:16343268-16344713 REVERSE LENGTH=481	LOC_Os01g41430.1	protein|UDP-glucoronosyl and UDP-glucosyl transferase, putative, expressed	IMGA|Medtr5g016660.1	Anthocyanin 3'-O-beta-glucosyltransferase chr5 5738929-5737260 H EGN_Mt100125 20111014	GO:0008152|metabolic process GO:0051707|response to other organism	GO:0008194|UDP-glycosyltransferase activity GO:0016758|transferase activity, transferring hexosyl groups GO:0035251|UDP-glucosyltransferase activity GO:0080043|quercetin 3-O-glucosyltransferase activity	NA
pt2_06249	A	A2S	Potri.002G123800	Potri.002G123800(AS) Potri.014G025000(DS)	POPTR_0002s12530	NA	NA	AT4G06536.1	| Symbols: | SPla/RYanodine receptor (SPRY) domain-containing protein | chr4:3360746-3361255 FORWARD LENGTH=169	LOC_Os02g40110.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005576|extracellular region GO:0009506|plasmodesma
pt2_06250	A	A1S	Potri.002G123900	Potri.002G123900(AS)	POPTR_0002s12540	NA	NA	AT5G52010.1	| Symbols: | C2H2-like zinc finger protein | chr5:21121626-21122816 REVERSE LENGTH=396	LOC_Os06g07020.1	protein|ZOS6-01 - C2H2 zinc finger protein, expressed	IMGA|Medtr1g019050.1	hypothetical protein chr1 5815826-5817006 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003676|nucleic acid binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0009507|chloroplast
pt2_06251	A	A1S	Potri.002G124000	Potri.002G124000(AS)	POPTR_0002s12550	sp|Q8LC30|RAP21_ARATH	Ethylene-responsive transcription factor RAP2-1 OS=Arabidopsis thaliana GN=RAP2-1 PE=2 SV=1	AT1G46768.1	| Symbols: RAP2.1 | related to AP2 1 | chr1:17266046-17266507 REVERSE LENGTH=153	LOC_Os04g55520.1	protein|AP2 domain containing protein, expressed	IMGA|Medtr5g016750.1	Ethylene-responsive transcription factor RAP2-10 chr5 5769257-5770316 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009409|response to cold GO:0009414|response to water deprivation GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_06252	A	A1S	Potri.002G124100	Potri.002G124100(AS)	POPTR_0002s12560	sp|Q6X7J9|WOX4_ARATH	WUSCHEL-related homeobox 4 OS=Arabidopsis thaliana GN=WOX4 PE=2 SV=1	AT1G46480.1	| Symbols: WOX4 | WUSCHEL related homeobox 4 | chr1:17236903-17237953 REVERSE LENGTH=251	LOC_Os04g55590.1	protein|homeobox domain containing protein, expressed	IMGA|Medtr5g081990.1	WUSCHEL-related homeobox chr5 34173373-34172481 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0007165|signal transduction GO:0010067|procambium histogenesis	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_06253	A	A1S	Potri.002G124200	Potri.002G124200(AS)	POPTR_0002s12570	sp|P42731|PABP2_ARATH	Polyadenylate-binding protein 2 OS=Arabidopsis thaliana GN=PAB2 PE=1 SV=1	AT1G49760.2	| Symbols: PAB8 | poly(A) binding protein 8 | chr1:18416740-18419753 FORWARD LENGTH=671	LOC_Os09g02700.1	protein|polyadenylate-binding protein, putative, expressed	IMGA|Medtr1g019150.1	Polyadenylate-binding protein chr1 5864665-5869890 F EGN_Mt100125 20111014	GO:0006164|purine nucleotide biosynthetic process GO:0006413|translational initiation GO:0006486|protein glycosylation GO:0009651|response to salt stress GO:0046686|response to cadmium ion	GO:0003723|RNA binding GO:0003743|translation initiation factor activity GO:0005515|protein binding	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_06254	A	A1S	Potri.002G124300	Potri.002G124300(AS)	POPTR_0002s12590	sp|Q9LT17|BBR_ARATH	E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana GN=BBR PE=2 SV=1	AT1G45180.1	| Symbols: | RING/U-box superfamily protein | chr1:17099335-17101683 FORWARD LENGTH=645	LOC_Os04g55510.1	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr1g019200.1	Zinc finger protein chr1 5896776-5903343 E EGN_Mt100125 20111014	NA	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_06255	A	A1S	Potri.002G124400	Potri.002G124400(AS)	POPTR_0002s12600	sp|Q9FUA4|SPT_ARATH	Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1 SV=1	AT4G36930.1	| Symbols: SPT | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr4:17414167-17415945 FORWARD LENGTH=373	LOC_Os06g06900.1	protein|helix-loop-helix DNA-binding domain containing protein, expressed	IMGA|Medtr5g017040.1	Transcription factor SPATULA chr5 5918843-5921342 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0007623|circadian rhythm GO:0009409|response to cold GO:0009908|flower development GO:0010114|response to red light GO:0010154|fruit development GO:0010187|negative regulation of seed germination GO:0048440|carpel development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_06256	A	A1S	Potri.002G124500	Potri.002G124500(AS)	POPTR_0002s12610	sp|O64495|SDD1_ARATH	Subtilisin-like protease SDD1 OS=Arabidopsis thaliana GN=SDD1 PE=2 SV=1	AT5G67090.1	| Symbols: | Subtilisin-like serine endopeptidase family protein | chr5:26774111-26776321 REVERSE LENGTH=736	LOC_Os05g36010.1	protein|OsSub47 - Putative Subtilisin homologue, expressed	IMGA|Medtr1g079120.1	Subtilisin-like protease chr1 19681980-19679546 E EGN_Mt100125 20111014	GO:0006508|proteolysis GO:0008152|metabolic process GO:0043086|negative regulation of catalytic activity	GO:0004252|serine-type endopeptidase activity GO:0042802|identical protein binding	GO:0005576|extracellular region GO:0005618|cell wall
pt2_06257	A	A1S	Potri.002G124600	Potri.002G124600(AS)	POPTR_0002s12620	NA	NA	AT1G45688.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42860.1); Has 258 Blast hits to 242 proteins in 39 species: Archae - 0; Bacteria - 11; Metazoa - 10; Fungi - 14; Plants - 198; Viruses - 17; Other Eukaryotes - 8 (source: NCBI BLink). | chr1:17191502-17192870 FORWARD LENGTH=342	LOC_Os04g59330.1	protein|expressed protein	NA	NA	GO:0008150|biological_process GO:0048767|root hair elongation	GO:0003674|molecular_function	GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_06258	A	A1S	Potri.002G124700	Potri.002G124700(AS)	POPTR_0002s12630	NA	NA	AT1G45976.1	| Symbols: SBP1 | S-ribonuclease binding protein 1 | chr1:17199371-17200680 FORWARD LENGTH=325	LOC_Os03g15730.1	protein|S-RNase-binding protein, putative, expressed	IMGA|Medtr1g019250.1	Baculoviral IAP repeat-containing protein chr1 5916498-5919036 F EGN_Mt100125 20111014	GO:0007165|signal transduction GO:0008150|biological_process GO:0009755|hormone-mediated signaling pathway GO:0048573|photoperiodism, flowering	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_06259	A	A1S	Potri.002G124800	Potri.002G124800(AS)	POPTR_0002s12640	sp|Q9C635|HSFB4_ARATH	Heat stress transcription factor B-4 OS=Arabidopsis thaliana GN=HSFB4 PE=2 SV=1	AT1G46264.1	| Symbols: AT-HSFB4, HSFB4, SCZ | heat shock transcription factor B4 | chr1:17224904-17226183 FORWARD LENGTH=348	LOC_Os07g44690.1	protein|HSF-type DNA-binding domain containing protein, expressed	IMGA|Medtr5g089170.1	Heat stress transcription factor B-4 chr5 37713556-37712242 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009408|response to heat	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_06260	A	A1S	Potri.002G124900	Potri.002G124900(AS)	POPTR_0002s12650	NA	NA	AT3G49180.1	| Symbols: RID3 | Transducin/WD40 repeat-like superfamily protein | chr3:18229810-18231874 FORWARD LENGTH=438	LOC_Os07g22534.3	protein|WD domain, G-beta repeat domain containing protein, expressed	IMGA|Medtr1g034820.1	Pre-rRNA-processing protein IPI3 chr1 9616966-9623101 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0000166|nucleotide binding	GO:0005737|cytoplasm GO:0005834|heterotrimeric G-protein complex GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_06261	A	A1S	Potri.002G125000	Potri.002G125000(AS)	POPTR_0002s12660	sp|Q9SND4|HEC2_ARATH	Transcription factor HEC2 OS=Arabidopsis thaliana GN=HEC2 PE=1 SV=1	AT3G50330.1	| Symbols: HEC2 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr3:18657423-18658118 REVERSE LENGTH=231	LOC_Os08g36740.1	protein|bHelix-loop-helix transcription factor, putative, expressed	IMGA|Medtr5g017210.1	Transcription factor HEC2 chr5 6002060-6002803 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0010500|transmitting tissue development GO:0048462|carpel formation GO:0080126|ovary septum development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_06262	C	C1S	Potri.002G125100	Potri.002G125100(CS)	NA	NA	AT1G56630.1	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr1:21223593-21226943 REVERSE LENGTH=485	NA	NA	IMGA|Medtr1g019270.1	Feruloyl esterase A chr1 5930369-5933464 E EGN_Mt100125 20111014	GO:0006629|lipid metabolic process	GO:0004806|triglyceride lipase activity	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_06263	A	A1A	Potri.002G125200	Potri.002G125200(AA)	POPTR_0002s12680	NA	NA	AT1G45207.2	| Symbols: | Remorin family protein | chr1:17130703-17133548 REVERSE LENGTH=555	LOC_Os02g52810.2	protein|remorin C-terminal domain containing protein, putative, expressed	IMGA|Medtr5g017290.1	Remorin-like protein chr5 6043421-6041543 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_06264	A	A1S	Potri.002G125200	Potri.002G125200(AS)	POPTR_0002s12690	NA	NA	AT1G45207.2	| Symbols: | Remorin family protein | chr1:17130703-17133548 REVERSE LENGTH=555	LOC_Os02g52810.2	protein|remorin C-terminal domain containing protein, putative, expressed	IMGA|Medtr5g017290.1	Remorin-like protein chr5 6043421-6041543 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_06265	A	A1S	Potri.002G125300	Potri.002G125300(AS)	POPTR_0002s12700	NA	NA	AT5G42920.1	| Symbols: THO5, AtTHO5 | THO complex, subunit 5 | chr5:17206310-17209106 REVERSE LENGTH=702	LOC_Os02g52820.1	protein|cold-induced protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_06266	A	A1S	Potri.002G125400	Potri.002G125400(AS)	POPTR_0002s12710	sp|Q9M7Q4|AI5L5_ARATH	ABSCISIC ACID-INSENSITIVE 5-like protein 5 OS=Arabidopsis thaliana GN=ABF2 PE=1 SV=1	AT1G45249.1	| Symbols: ABF2, AREB1, ATAREB1 | abscisic acid responsive elements-binding factor 2 | chr1:17165420-17167415 REVERSE LENGTH=416	LOC_Os02g52780.2	protein|bZIP transcription factor, putative, expressed	IMGA|Medtr5g088230.1	ABSCISIC ACID-INSENSITIVE 5-like protein chr5 37220804-37224366 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009414|response to water deprivation GO:0009651|response to salt stress GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0010255|glucose mediated signaling pathway GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0043565|sequence-specific DNA binding GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_06267	A	A1S	Potri.002G125500	Potri.002G125500(AS)	POPTR_0002s12720	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06268	A	A2S	Potri.002G125700	Potri.002G125700(AS) Potri.014G028300(BS)	POPTR_0002s12730	sp|Q42463|DCL_SOLLC	Protein DCL, chloroplastic OS=Solanum lycopersicum GN=DCL PE=2 SV=1	AT1G45230.1	| Symbols: | Protein of unknown function (DUF3223) | chr1:17169874-17171381 REVERSE LENGTH=219	LOC_Os02g52744.1	protein|DCL, chloroplast precursor, putative, expressed	IMGA|Medtr5g011000.1	DNA-directed RNA polymerase subunit beta chr5 2818055-2831436 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_06269	A	A1S	Potri.002G125800	Potri.002G125800(AS)	POPTR_0002s12740	sp|Q9NBK5|TRC_DROME	Serine/threonine-protein kinase tricorner OS=Drosophila melanogaster GN=trc PE=1 SV=1	AT5G09890.1	| Symbols: | Protein kinase family protein | chr5:3085810-3088842 REVERSE LENGTH=515	LOC_Os01g09200.1	protein|AGC_AGC_other_NDRh_TRCd.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed	IMGA|Medtr5g069000.1	Microtubule-associated serine/threonine-protein kinase chr5 28211794-28220768 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_06270	A	A1S	Potri.002G125900	Potri.002G125900(AS)	POPTR_0002s12750	NA	NA	AT5G42900.3	| Symbols: | cold regulated gene 27 | chr5:17198366-17199712 REVERSE LENGTH=245	NA	NA	NA	NA	GO:0009409|response to cold GO:0080167|response to karrikin	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_06271	A	A1S	Potri.002G126000	Potri.002G126000(AS)	POPTR_0002s12760	sp|Q6PBN4|CQ10X_DANRE	Coenzyme Q-binding protein COQ10 homolog, mitochondrial OS=Danio rerio GN=zgc:73324 PE=2 SV=2	AT4G17650.1	| Symbols: | Polyketide cyclase / dehydrase and lipid transport protein | chr4:9827749-9829443 FORWARD LENGTH=256	LOC_Os01g56560.1	protein|cyclase/dehydrase family protein, expressed	NA	NA	GO:0008150|biological_process GO:0015824|proline transport GO:0016036|cellular response to phosphate starvation GO:0019243|methylglyoxal catabolic process to D-lactate GO:0019375|galactolipid biosynthetic process GO:0042631|cellular response to water deprivation	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_06272	A	A2S	Potri.002G126100	Potri.002G126100(AS) Potri.014G029100(DS)	POPTR_0002s12770	sp|Q9LJK2|ABAH4_ARATH	Abscisic acid 8'-hydroxylase 4 OS=Arabidopsis thaliana GN=CYP707A4 PE=2 SV=2	AT3G19270.1	| Symbols: CYP707A4 | cytochrome P450, family 707, subfamily A, polypeptide 4 | chr3:6673885-6676400 REVERSE LENGTH=468	LOC_Os09g28390.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g025610.1	Abscisic acid 8'-hydroxylase chr5 10165401-10168264 F EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0010295|(+)-abscisic acid 8'-hydroxylase activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005576|extracellular region
pt2_06273	A	A1S	Potri.002G126200	Potri.002G126200(AS)	POPTR_0002s12780	NA	NA	AT5G42890.1	| Symbols: ATSCP2, SCP2 | sterol carrier protein 2 | chr5:17194458-17195910 REVERSE LENGTH=123	LOC_Os02g52720.1	protein|peroxisomal multifunctional enzyme type 2, putative, expressed	NA	NA	GO:0006635|fatty acid beta-oxidation GO:0007031|peroxisome organization GO:0008152|metabolic process GO:0009686|gibberellin biosynthetic process GO:0009740|gibberellic acid mediated signaling pathway GO:0009845|seed germination GO:0032365|intracellular lipid transport GO:0046487|glyoxylate metabolic process GO:0048608|reproductive structure development	GO:0016491|oxidoreductase activity GO:0032934|sterol binding	GO:0005777|peroxisome GO:0009507|chloroplast
pt2_06274	A	A1S	Potri.002G126300	Potri.002G126300(AS)	POPTR_0002s12790	sp|P17859|AMYA_VIGMU	Alpha-amylase OS=Vigna mungo GN=AMY1.1 PE=2 SV=1	AT4G25000.1	| Symbols: ATAMY1, AMY1 | alpha-amylase-like | chr4:12852109-12853825 REVERSE LENGTH=423	LOC_Os08g36910.1	protein|alpha-amylase precursor, putative, expressed	IMGA|Medtr1g019440.2	Alpha-amylase chr1 6026886-6029202 F EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0009737|response to abscisic acid stimulus GO:0009739|response to gibberellin stimulus	GO:0003824|catalytic activity GO:0004556|alpha-amylase activity GO:0005509|calcium ion binding GO:0043169|cation binding	GO:0005576|extracellular region GO:0048046|apoplast
pt2_06275	A	A1S	Potri.002G126500	Potri.002G126500(AS)	POPTR_0002s12800	sp|P40781|CYPR4_CYNCA	Protein CYPRO4 OS=Cynara cardunculus GN=CYPRO4 PE=2 SV=1	AT4G33400.1	| Symbols: | Vacuolar import/degradation, Vid27-related protein | chr4:16078189-16080410 REVERSE LENGTH=645	LOC_Os02g54780.1	protein|CYPRO4, putative, expressed	NA	NA	GO:0006260|DNA replication GO:0006275|regulation of DNA replication GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0006499|N-terminal protein myristoylation GO:0008283|cell proliferation GO:0009640|photomorphogenesis GO:0009909|regulation of flower development GO:0010388|cullin deneddylation GO:0010389|regulation of G2/M transition of mitotic cell cycle GO:0016458|gene silencing GO:0016567|protein ubiquitination GO:0016571|histone methylation GO:0016572|histone phosphorylation GO:0016579|protein deubiquitination GO:0031047|gene silencing by RNA GO:0034968|histone lysine methylation GO:0045893|positive regulation of transcription, DNA-dependent GO:0051567|histone H3-K9 methylation	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane
pt2_06276	G	G1	NA	NA	POPTR_0002s12810	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06277	A	A1S	Potri.002G126700	Potri.002G126700(AS)	POPTR_0002s12820	sp|O48724|WEB1_ARATH	Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1 OS=Arabidopsis thaliana GN=WEB1 PE=1 SV=1	AT2G26570.1	| Symbols: WEB1 | Plant protein of unknown function (DUF827) | chr2:11299565-11302076 FORWARD LENGTH=807	LOC_Os03g27800.1	protein|paramyosin, putative, expressed	NA	NA	GO:0009903|chloroplast avoidance movement GO:0009904|chloroplast accumulation movement	GO:0005515|protein binding	GO:0005829|cytosol GO:0005886|plasma membrane
pt2_06278	A	A1S	Potri.002G126800	Potri.002G126800(AS)	POPTR_0002s12830	sp|Q9SZB2|TIC22_ARATH	Protein TIC 22, chloroplastic OS=Arabidopsis thaliana GN=TIC22 PE=1 SV=1	AT4G33350.1	| Symbols: | Tic22-like family protein | chr4:16064638-16066715 REVERSE LENGTH=268	LOC_Os06g11020.1	protein|tic22-like family domain containing protein, expressed	NA	NA	NA	NA	GO:0009507|chloroplast GO:0009536|plastid GO:0009706|chloroplast inner membrane GO:0009941|chloroplast envelope
pt2_06279	A	A1S	Potri.002G126900	Potri.002G126900(AS)	POPTR_0002s12840	NA	NA	NA	NA	NA	NA	NA	NA	GO:0000041|transition metal ion transport GO:0006499|N-terminal protein myristoylation GO:0007165|signal transduction GO:0009407|toxin catabolic process GO:0009693|ethylene biosynthetic process GO:0009827|plant-type cell wall modification GO:0009860|pollen tube growth GO:0010359|regulation of anion channel activity GO:0010583|response to cyclopentenone	GO:0005509|calcium ion binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_06280	A	A1S	Potri.002G127000	Potri.002G127000(AS)	POPTR_0002s12850	NA	NA	NA	NA	LOC_Os06g11030.1	protein|EF hand family protein, putative, expressed	NA	NA	GO:0009693|ethylene biosynthetic process GO:0010193|response to ozone GO:0010286|heat acclimation GO:0030968|endoplasmic reticulum unfolded protein response GO:0052542|defense response by callose deposition	GO:0005509|calcium ion binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_06281	A	A1S	Potri.002G127100	Potri.002G127100(AS)	POPTR_0002s12860	NA	NA	NA	NA	NA	NA	NA	NA	GO:0010423|negative regulation of brassinosteroid biosynthetic process	GO:0005515|protein binding GO:0046982|protein heterodimerization activity	GO:0005634|nucleus GO:0005829|cytosol GO:0005886|plasma membrane
pt2_06282	A	A1S	Potri.002G127300	Potri.002G127300(AS)	POPTR_0002s12870	sp|Q9FX08|P2C12_ARATH	Probable protein phosphatase 2C 12 OS=Arabidopsis thaliana GN=At1g47380 PE=2 SV=1	AT1G47380.1	| Symbols: | Protein phosphatase 2C family protein | chr1:17373004-17375305 REVERSE LENGTH=428	LOC_Os02g35910.1	protein|protein phosphotase protein, putative, expressed	IMGA|Medtr1g019760.1	Protein phosphatase 2C-like protein chr1 6167021-6161566 E EGN_Mt100125 20111014	NA	GO:0003824|catalytic activity GO:0004722|protein serine/threonine phosphatase activity	GO:0005739|mitochondrion GO:0005829|cytosol
pt2_06283	A	A1S	Potri.002G127400	Potri.002G127400(AS)	POPTR_0002s12890	sp|P73212|DFRA_SYNY3	Putative dihydroflavonol-4-reductase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=dfrA PE=3 SV=1	AT4G33360.1	| Symbols: FLDH | NAD(P)-binding Rossmann-fold superfamily protein | chr4:16067989-16069374 REVERSE LENGTH=344	LOC_Os03g08624.1	protein|dihydroflavonol-4-reductase, putative, expressed	IMGA|Medtr5g072620.1	Dihydroflavonol 4-reductase-like protein chr5 29922618-29926018 E EGN_Mt100125 20111014	GO:0006721|terpenoid metabolic process GO:0009627|systemic acquired resistance GO:0009744|response to sucrose stimulus GO:0009749|response to glucose stimulus GO:0009750|response to fructose stimulus GO:0009788|negative regulation of abscisic acid mediated signaling pathway GO:0009853|photorespiration GO:0016487|farnesol metabolic process GO:0034976|response to endoplasmic reticulum stress GO:0044237|cellular metabolic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0047886|farnesol dehydrogenase activity GO:0050662|coenzyme binding	GO:0005634|nucleus GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005783|endoplasmic reticulum GO:0005886|plasma membrane
pt2_06284	A	A1S	Potri.002G127500	Potri.002G127500(AS)	POPTR_0002s12900	sp|P73212|DFRA_SYNY3	Putative dihydroflavonol-4-reductase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=dfrA PE=3 SV=1	AT4G33360.1	| Symbols: FLDH | NAD(P)-binding Rossmann-fold superfamily protein | chr4:16067989-16069374 REVERSE LENGTH=344	LOC_Os03g08624.1	protein|dihydroflavonol-4-reductase, putative, expressed	IMGA|Medtr5g072620.1	Dihydroflavonol 4-reductase-like protein chr5 29922618-29926018 E EGN_Mt100125 20111014	GO:0006721|terpenoid metabolic process GO:0009627|systemic acquired resistance GO:0009744|response to sucrose stimulus GO:0009749|response to glucose stimulus GO:0009750|response to fructose stimulus GO:0009788|negative regulation of abscisic acid mediated signaling pathway GO:0009853|photorespiration GO:0016487|farnesol metabolic process GO:0034976|response to endoplasmic reticulum stress GO:0044237|cellular metabolic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0047886|farnesol dehydrogenase activity GO:0050662|coenzyme binding	GO:0005634|nucleus GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005783|endoplasmic reticulum GO:0005886|plasma membrane
pt2_06285	A	A1S	Potri.002G127700	Potri.002G127700(AS)	POPTR_0002s12920	NA	NA	AT4G33380.1	| Symbols: | unknown protein; Has 194 Blast hits to 189 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 184; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). | chr4:16072064-16074605 FORWARD LENGTH=328	LOC_Os02g52410.1	protein|expressed protein	NA	NA	NA	NA	GO:0005794|Golgi apparatus
pt2_06286	A	A1S	Potri.002G127800	Potri.002G127800(AS)	POPTR_0002s12930	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process GO:0010413|glucuronoxylan metabolic process GO:0016926|protein desumoylation GO:0044036|cell wall macromolecule metabolic process GO:0045492|xylan biosynthetic process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_06287	A	A2S	Potri.002G127900	Potri.002G127900(AS) Potri.014G032900(DS)	POPTR_0002s12940	sp|Q9LT08|PSDE_ARATH	26S proteasome non-ATPase regulatory subunit 14 OS=Arabidopsis thaliana GN=RPN11 PE=2 SV=1	AT5G23540.1	| Symbols: | Mov34/MPN/PAD-1 family protein | chr5:7937772-7939339 FORWARD LENGTH=308	LOC_Os05g30800.1	protein|26S proteasome non-ATPase regulatory subunit 14, putative, expressed	IMGA|Medtr1g019930.1	26S proteasome non-ATPase regulatory subunit chr1 6242431-6238497 F EGN_Mt100125 20111014	GO:0006096|glycolysis GO:0006499|N-terminal protein myristoylation GO:0006511|ubiquitin-dependent protein catabolic process GO:0006623|protein targeting to vacuole GO:0006635|fatty acid beta-oxidation GO:0006833|water transport GO:0006972|hyperosmotic response GO:0007030|Golgi organization GO:0009266|response to temperature stimulus GO:0009407|toxin catabolic process GO:0009640|photomorphogenesis GO:0009651|response to salt stress GO:0009853|photorespiration GO:0010388|cullin deneddylation GO:0030163|protein catabolic process GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0043248|proteasome assembly GO:0046686|response to cadmium ion GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	NA	GO:0000502|proteasome complex GO:0005634|nucleus GO:0005829|cytosol GO:0008541|proteasome regulatory particle, lid subcomplex
pt2_06288	A	A1S	Potri.002G128000	Potri.002G128000(AS)	POPTR_0002s12950	sp|Q3YJT2|PT2K2_SOLTU	Patatin-2-Kuras 2 OS=Solanum tuberosum GN=pat2-k2 PE=2 SV=1	AT2G26560.1	| Symbols: PLP2, PLA IIA, PLA2A | phospholipase A 2A | chr2:11293912-11295708 REVERSE LENGTH=407	LOC_Os09g28770.1	protein|patatin, putative, expressed	IMGA|Medtr1g019940.1	Patatin-like protein chr1 6248270-6244589 F EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0002237|response to molecule of bacterial origin GO:0002679|respiratory burst involved in defense response GO:0002831|regulation of response to biotic stimulus GO:0006612|protein targeting to membrane GO:0006629|lipid metabolic process GO:0006944|cellular membrane fusion GO:0008152|metabolic process GO:0008219|cell death GO:0009595|detection of biotic stimulus GO:0009626|plant-type hypersensitive response GO:0009646|response to absence of light GO:0009697|salicylic acid biosynthetic process GO:0009723|response to ethylene stimulus GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0031348|negative regulation of defense response GO:0031408|oxylipin biosynthetic process GO:0042742|defense response to bacterium GO:0043069|negative regulation of programmed cell death GO:0043900|regulation of multi-organism process GO:0046686|response to cadmium ion GO:0050832|defense response to fungus GO:0051607|defense response to virus GO:0051707|response to other organism GO:0071456|cellular response to hypoxia	GO:0016298|lipase activity GO:0045735|nutrient reservoir activity	GO:0005737|cytoplasm GO:0009507|chloroplast GO:0016020|membrane
pt2_06289	A	A1S	Potri.002G128100	Potri.002G128100(AS)	POPTR_0002s12960	sp|Q9LEB3|RBP47_NICPL	Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia GN=RBP47 PE=1 SV=1	AT1G47490.1	| Symbols: ATRBP47C, RBP47C | RNA-binding protein 47C | chr1:17424801-17427182 FORWARD LENGTH=432	LOC_Os09g28810.1	protein|RNA recognition motif containing protein, putative, expressed	IMGA|Medtr1g019150.1	Polyadenylate-binding protein chr1 5864665-5869890 F EGN_Mt100125 20111014	NA	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding GO:0008143|poly(A) RNA binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0009507|chloroplast
pt2_06290	C	C1S	Potri.002G128200	Potri.002G128200(CS)	NA	NA	AT4G34310.1	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr4:16414113-16419542 FORWARD LENGTH=1228	LOC_Os03g08700.1	protein|expressed protein	IMGA|contig_51101_1.1	LipA and NB-ARC domain protein contig_51101 343-4694 E PREDN 20111014	GO:0006505|GPI anchor metabolic process GO:0006886|intracellular protein transport	GO:0016788|hydrolase activity, acting on ester bonds	GO:0031227|intrinsic to endoplasmic reticulum membrane
pt2_06291	A	A1S	Potri.002G128300	Potri.002G128300(AS)	POPTR_0002s12980	sp|Q2MY58|PATA3_SOLTU	Patatin group A-3 OS=Solanum tuberosum PE=2 SV=1	AT2G26560.1	| Symbols: PLP2, PLA IIA, PLA2A | phospholipase A 2A | chr2:11293912-11295708 REVERSE LENGTH=407	LOC_Os09g28770.1	protein|patatin, putative, expressed	IMGA|Medtr1g019940.1	Patatin-like protein chr1 6248270-6244589 F EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0002237|response to molecule of bacterial origin GO:0002679|respiratory burst involved in defense response GO:0002831|regulation of response to biotic stimulus GO:0006612|protein targeting to membrane GO:0006629|lipid metabolic process GO:0006944|cellular membrane fusion GO:0008152|metabolic process GO:0008219|cell death GO:0009595|detection of biotic stimulus GO:0009626|plant-type hypersensitive response GO:0009646|response to absence of light GO:0009697|salicylic acid biosynthetic process GO:0009723|response to ethylene stimulus GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0031348|negative regulation of defense response GO:0031408|oxylipin biosynthetic process GO:0042742|defense response to bacterium GO:0043069|negative regulation of programmed cell death GO:0043900|regulation of multi-organism process GO:0046686|response to cadmium ion GO:0050832|defense response to fungus GO:0051607|defense response to virus GO:0051707|response to other organism GO:0071456|cellular response to hypoxia	GO:0016298|lipase activity GO:0045735|nutrient reservoir activity	GO:0005737|cytoplasm GO:0009507|chloroplast GO:0016020|membrane
pt2_06292	A	A1S	Potri.002G128400	Potri.002G128400(AS)	POPTR_0002s12990	NA	NA	AT5G42690.3	| Symbols: | Protein of unknown function, DUF547 | chr5:17116630-17118960 REVERSE LENGTH=488	LOC_Os09g28850.2	protein|expressed protein	IMGA|Medtr1g021040.1	hypothetical protein chr1 6350452-6353400 E EGN_Mt100125 20111014	NA	NA	GO:0005739|mitochondrion
pt2_06293	A	A1S	Potri.002G128500	Potri.002G128500(AS)	POPTR_0002s13000	NA	NA	AT2G26530.1	| Symbols: AR781 | Protein of unknown function (DUF1645) | chr2:11283036-11283989 REVERSE LENGTH=317	LOC_Os02g52380.1	protein|DUF1645 domain containing protein, putative, expressed	NA	NA	GO:0006612|protein targeting to membrane GO:0008150|biological_process GO:0009611|response to wounding GO:0009612|response to mechanical stimulus GO:0009646|response to absence of light GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010200|response to chitin GO:0010363|regulation of plant-type hypersensitive response	GO:0003674|molecular_function	GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_06294	A	A1S	Potri.002G128700	Potri.002G128700(AS)	POPTR_0002s13010	sp|P34422|DPF6_CAEEL	Dipeptidyl peptidase family member 6 OS=Caenorhabditis elegans GN=dpf-6 PE=2 SV=2	AT5G36210.1	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr5:14248202-14253272 REVERSE LENGTH=730	LOC_Os06g11180.1	protein|OsPOP12 - Putative Prolyl Oligopeptidase homologue, expressed	IMGA|Medtr5g042400.1	Acylamino-acid-releasing enzyme chr5 18223046-18213613 F EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0006508|proteolysis	GO:0008236|serine-type peptidase activity	GO:0005576|extracellular region GO:0005829|cytosol GO:0009507|chloroplast
pt2_06295	A	A1S	Potri.002G128800	Potri.002G128800(AS)	POPTR_0002s13020	NA	NA	AT5G42680.2	| Symbols: | Protein of unknown function, DUF617 | chr5:17114640-17115356 FORWARD LENGTH=238	LOC_Os09g28880.1	protein|DUF617 domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_06296	A	A2S	Potri.002G128900	Potri.002G128900(AS) Potri.014G035100(DS)	POPTR_0002s13030	sp|Q9FDW1|MYB44_ARATH	Transcription factor MYB44 OS=Arabidopsis thaliana GN=MYB44 PE=2 SV=1	AT4G37260.1	| Symbols: MYB73, ATMYB73 | myb domain protein 73 | chr4:17540602-17541564 FORWARD LENGTH=320	LOC_Os09g01960.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr5g016510.1	R2R3-MYB transcription factor chr5 5667229-5666279 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009723|response to ethylene stimulus GO:0009737|response to abscisic acid stimulus GO:0009751|response to salicylic acid stimulus GO:0009753|response to jasmonic acid stimulus GO:0010200|response to chitin GO:0046686|response to cadmium ion	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_06297	A	A1S	Potri.002G129000	Potri.002G129000(AS)	POPTR_0002s13040	sp|D0EL35|CTC1_ARATH	CST complex subunit CTC1 OS=Arabidopsis thaliana GN=CTC1 PE=1 SV=2	AT4G09680.1	| Symbols: CTC1, ATCTC1 | conserved telomere maintenance component 1 | chr4:6116819-6123017 FORWARD LENGTH=1274	LOC_Os09g20910.1	protein|expressed protein	NA	NA	GO:0000723|telomere maintenance GO:0010048|vernalization response	GO:0003674|molecular_function GO:0005515|protein binding	GO:0000781|chromosome, telomeric region GO:0005634|nucleus
pt2_06298	A	A1S	Potri.002G129000	Potri.002G129000(AS)	POPTR_0002s13040	sp|D0EL35|CTC1_ARATH	CST complex subunit CTC1 OS=Arabidopsis thaliana GN=CTC1 PE=1 SV=2	AT4G09680.1	| Symbols: CTC1, ATCTC1 | conserved telomere maintenance component 1 | chr4:6116819-6123017 FORWARD LENGTH=1274	LOC_Os09g20910.1	protein|expressed protein	NA	NA	GO:0000723|telomere maintenance GO:0010048|vernalization response	GO:0003674|molecular_function GO:0005515|protein binding	GO:0000781|chromosome, telomeric region GO:0005634|nucleus
pt2_06299	A	A1S	Potri.002G129000	Potri.002G129000(AS)	POPTR_0002s13040	sp|D0EL35|CTC1_ARATH	CST complex subunit CTC1 OS=Arabidopsis thaliana GN=CTC1 PE=1 SV=2	AT4G09680.1	| Symbols: CTC1, ATCTC1 | conserved telomere maintenance component 1 | chr4:6116819-6123017 FORWARD LENGTH=1274	LOC_Os09g20910.1	protein|expressed protein	NA	NA	GO:0000723|telomere maintenance GO:0010048|vernalization response	GO:0003674|molecular_function GO:0005515|protein binding	GO:0000781|chromosome, telomeric region GO:0005634|nucleus
pt2_06300	A	A1S	Potri.002G129100	Potri.002G129100(AS)	POPTR_0002s13050	sp|O22040|ANP1_ARATH	Mitogen-activated protein kinase kinase kinase ANP1 OS=Arabidopsis thaliana GN=ANP1 PE=1 SV=2	AT5G66850.1	| Symbols: MAPKKK5 | mitogen-activated protein kinase kinase kinase 5 | chr5:26695965-26699159 REVERSE LENGTH=716	LOC_Os03g55560.2	protein|STE_MEKK_ste11_MAP3K.15 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	IMGA|Medtr5g017890.1	Mitogen-activated protein kinase kinase kinase A chr5 6370522-6365746 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0046777|protein autophosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_06301	D	D1S	Potri.014G035600	Potri.014G035600(DS)	POPTR_0002s13060	sp|Q9SX99|OSB1_ARATH	Protein OSB1, mitochondrial OS=Arabidopsis thaliana GN=OSB1 PE=1 SV=1	AT1G47720.1	| Symbols: OSB1 | Primosome PriB/single-strand DNA-binding | chr1:17561514-17562859 REVERSE LENGTH=261	LOC_Os01g72049.1	protein|retrotransposon, putative, centromere-specific, expressed	NA	NA	GO:0000002|mitochondrial genome maintenance GO:0006355|regulation of transcription, DNA-dependent GO:0043687|post-translational protein modification GO:0045893|positive regulation of transcription, DNA-dependent GO:0045910|negative regulation of DNA recombination	GO:0003697|single-stranded DNA binding	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0048046|apoplast
pt2_06302	A	A1S	Potri.002G129300	Potri.002G129300(AS)	POPTR_0002s13070	sp|Q9SZA7|DRL29_ARATH	Probable disease resistance protein At4g33300 OS=Arabidopsis thaliana GN=At4g33300 PE=2 SV=3	AT4G33300.2	| Symbols: ADR1-L1 | ADR1-like 1 | chr4:16051162-16054005 REVERSE LENGTH=816	LOC_Os12g39620.3	protein|disease resistance protein, putative, expressed	IMGA|Medtr1g021100.1	Nbs-lrr resistance protein chr1 6382989-6387220 E EGN_Mt100125 20111014	GO:0006612|protein targeting to membrane GO:0006952|defense response GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010363|regulation of plant-type hypersensitive response GO:0031348|negative regulation of defense response GO:0042742|defense response to bacterium	GO:0043531|ADP binding	GO:0048046|apoplast
pt2_06303	A	A1S	Potri.002G129400	Potri.002G129400(AS)	POPTR_0002s13080	sp|Q8GZD4|NAT3_ARATH	Nucleobase-ascorbate transporter 3 OS=Arabidopsis thaliana GN=NAT3 PE=2 SV=2	AT2G26510.1	| Symbols: PDE135 | Xanthine/uracil permease family protein | chr2:11274118-11277464 FORWARD LENGTH=551	LOC_Os12g39420.8	protein|nucleobase-ascorbate transporter, putative, expressed	IMGA|Medtr1g021120.1	Nucleobase-ascorbate transporter chr1 6403467-6398902 E EGN_Mt100125 20111014	GO:0006810|transport GO:0055085|transmembrane transport	GO:0005215|transporter activity GO:0022857|transmembrane transporter activity	GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0009507|chloroplast GO:0016020|membrane
pt2_06304	A	A1S	Potri.002G129500	Potri.002G129500(AS)	POPTR_0002s13090	sp|Q8VYE4|PTR12_ARATH	Probable peptide/nitrate transporter At1g27040 OS=Arabidopsis thaliana GN=At1g27040 PE=2 SV=1	AT1G27040.2	| Symbols: | Major facilitator superfamily protein | chr1:9386893-9389838 REVERSE LENGTH=563	LOC_Os01g54515.1	protein|peptide transporter PTR2, putative, expressed	IMGA|Medtr5g038380.1	Nitrate transporter NTL1 chr5 16398082-16404412 E EGN_Mt100125 20111014	GO:0006857|oligopeptide transport	GO:0005215|transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_06305	A	A1S	Potri.002G129600	Potri.002G129600(AS)	POPTR_0002s13100	sp|Q9SX97|DOF16_ARATH	Dof zinc finger protein DOF1.6 OS=Arabidopsis thaliana GN=DOF1.6 PE=2 SV=1	AT1G47655.1	| Symbols: | Dof-type zinc finger DNA-binding family protein | chr1:17525437-17526066 FORWARD LENGTH=209	LOC_Os02g47810.1	protein|dof zinc finger domain containing protein, putative, expressed	IMGA|contig_99303_1.1	Dof zinc finger protein contig_99303 304-1771 F PREDN 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06306	A	A1S	Potri.002G129600	Potri.002G129600(AS)	POPTR_0002s13100	sp|Q9SX97|DOF16_ARATH	Dof zinc finger protein DOF1.6 OS=Arabidopsis thaliana GN=DOF1.6 PE=2 SV=1	AT1G47655.1	| Symbols: | Dof-type zinc finger DNA-binding family protein | chr1:17525437-17526066 FORWARD LENGTH=209	LOC_Os02g47810.1	protein|dof zinc finger domain containing protein, putative, expressed	IMGA|contig_99303_1.1	Dof zinc finger protein contig_99303 304-1771 F PREDN 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06307	A	A1S	Potri.002G129700	Potri.002G129700(AS)	POPTR_0002s13110	sp|Q93ZB2|KO1_ARATH	Ent-kaurene oxidase, chloroplastic OS=Arabidopsis thaliana GN=KO1 PE=1 SV=2	AT5G25900.1	| Symbols: GA3, CYP701A3, ATKO1 | GA requiring 3 | chr5:9036073-9038278 FORWARD LENGTH=509	LOC_Os06g37364.2	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g007450.1	Cytochrome P450 chr5 1126086-1128269 F EGN_Mt100125 20111014	GO:0009686|gibberellin biosynthetic process GO:0009740|gibberellic acid mediated signaling pathway GO:0010241|ent-kaurene oxidation to kaurenoic acid GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005783|endoplasmic reticulum GO:0009507|chloroplast GO:0009707|chloroplast outer membrane
pt2_06308	C	C1S	Potri.002G129700	Potri.002G129700(CS)	sp|Q93ZB2|KO1_ARATH	Ent-kaurene oxidase, chloroplastic OS=Arabidopsis thaliana GN=KO1 PE=1 SV=2	AT5G25900.1	| Symbols: GA3, CYP701A3, ATKO1 | GA requiring 3 | chr5:9036073-9038278 FORWARD LENGTH=509	LOC_Os06g37364.2	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g007450.1	Cytochrome P450 chr5 1126086-1128269 F EGN_Mt100125 20111014	GO:0009686|gibberellin biosynthetic process GO:0009740|gibberellic acid mediated signaling pathway GO:0010241|ent-kaurene oxidation to kaurenoic acid GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005783|endoplasmic reticulum GO:0009507|chloroplast GO:0009707|chloroplast outer membrane
pt2_06309	A	A1S	Potri.002G129800	Potri.002G129800(AS)	POPTR_0002s13130	sp|Q8RYD1|REM16_ARATH	B3 domain-containing protein REM16 OS=Arabidopsis thaliana GN=REM16 PE=2 SV=1	AT4G33280.1	| Symbols: | AP2/B3-like transcriptional factor family protein | chr4:16047357-16049310 REVERSE LENGTH=337	LOC_Os12g40090.1	protein|B3 DNA binding domain containing protein, expressed	IMGA|Medtr1g021500.2	B3 domain-containing protein chr1 6560394-6564827 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus GO:0005773|vacuole
pt2_06310	A	A1S	Potri.002G129900	Potri.002G129900(AS)	POPTR_0002s13140	sp|Q8RYD1|REM16_ARATH	B3 domain-containing protein REM16 OS=Arabidopsis thaliana GN=REM16 PE=2 SV=1	AT4G33280.1	| Symbols: | AP2/B3-like transcriptional factor family protein | chr4:16047357-16049310 REVERSE LENGTH=337	LOC_Os12g40120.1	protein|B3 DNA binding domain containing protein, expressed	IMGA|Medtr1g021500.2	B3 domain-containing protein chr1 6560394-6564827 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus GO:0005773|vacuole
pt2_06311	B	B1S	Potri.002G130000	Potri.002G130000(BS)	POPTR_0002s13150	NA	NA	AT2G26500.1	| Symbols: | cytochrome b6f complex subunit (petM), putative | chr2:11270370-11270747 FORWARD LENGTH=125	NA	NA	NA	NA	GO:0006364|rRNA processing GO:0009657|plastid organization GO:0010207|photosystem II assembly	GO:0009496|plastoquinol--plastocyanin reductase activity	GO:0009507|chloroplast GO:0009512|cytochrome b6f complex GO:0009535|chloroplast thylakoid membrane
pt2_06312	B	B2S	Potri.002G130100	Potri.002G130100(BS) Potri.014G037100(BS)	POPTR_0002s13160	sp|Q28FY5|TM147_XENTR	Transmembrane protein 147 OS=Xenopus tropicalis GN=tmem147 PE=2 SV=1	AT1G47640.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2053, membrane (InterPro:IPR019164); Has 204 Blast hits to 204 proteins in 84 species: Archae - 0; Bacteria - 0; Metazoa - 127; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). | chr1:17518409-17519998 REVERSE LENGTH=228	LOC_Os03g55730.1	protein|SSA2 - 2S albumin seed storage family protein precursor, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0005794|Golgi apparatus GO:0009507|chloroplast
pt2_06313	A	A2S	Potri.002G130200	Potri.002G130200(AS) Potri.014G037200(BS)	POPTR_0002s13170	sp|Q9FJV5|KAN4_ARATH	Probable transcription factor KAN4 OS=Arabidopsis thaliana GN=KAN4 PE=1 SV=1	AT5G42630.1	| Symbols: KAN4, ATS | Homeodomain-like superfamily protein | chr5:17073997-17075747 REVERSE LENGTH=276	LOC_Os03g55760.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr1g021520.1	Myb family transcription factor-like protein chr1 6576174-6579290 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0048481|ovule development GO:0080060|integument development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0044212|transcription regulatory region DNA binding	GO:0005618|cell wall GO:0005634|nucleus
pt2_06314	A	A1S	Potri.002G130300	Potri.002G130300(AS)	POPTR_0002s13180	sp|Q9C660|PEK10_ARATH	Proline-rich receptor-like protein kinase PERK10 OS=Arabidopsis thaliana GN=PERK10 PE=1 SV=2	AT1G55200.1	| Symbols: | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain | chr1:20589309-20592049 REVERSE LENGTH=676	LOC_Os01g41870.2	protein|protein kinase, putative, expressed	IMGA|Medtr5g019940.1	Cysteine-rich receptor-like protein kinase chr5 7305562-7308897 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0046777|protein autophosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005575|cellular_component GO:0005886|plasma membrane
pt2_06315	C	C1S	Potri.002G130400	Potri.002G130400(CS)	sp|Q61FW2|SEL10_CAEBR	F-box/WD repeat-containing protein sel-10 OS=Caenorhabditis briggsae GN=sel-10 PE=3 SV=1	AT2G26490.1	| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr2:11268035-11269432 FORWARD LENGTH=465	LOC_Os03g52870.1	protein|WD-40 repeat family protein, putative, expressed	IMGA|Medtr5g018520.1	Guanine nucleotide-binding protein subunit beta-like protein chr5 6660942-6659569 H EGN_Mt100125 20111014	GO:0006944|cellular membrane fusion GO:0008150|biological_process	GO:0000166|nucleotide binding	GO:0005737|cytoplasm GO:0005834|heterotrimeric G-protein complex
pt2_06316	A	A1S	Potri.002G130500	Potri.002G130500(AS)	POPTR_0002s13200	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06317	A	A1S	Potri.002G130600	Potri.002G130600(AS)	POPTR_0002s13210	sp|Q8RY67|WAKLO_ARATH	Wall-associated receptor kinase-like 14 OS=Arabidopsis thaliana GN=WAKL14 PE=2 SV=2	AT2G23450.1	| Symbols: | Protein kinase superfamily protein | chr2:9988926-9991244 REVERSE LENGTH=708	LOC_Os03g12470.1	protein|OsWAK25 - OsWAK receptor-like protein kinase, expressed	IMGA|Medtr5g018570.1	Kinase-like protein chr5 6674294-6679204 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005575|cellular_component
pt2_06318	A	A1S	Potri.002G130700	Potri.002G130700(AS)	POPTR_0002s13220	sp|P48417|CP74_LINUS	Allene oxide synthase, chloroplastic OS=Linum usitatissimum GN=CYP74A PE=1 SV=1	AT5G42650.1	| Symbols: AOS, CYP74A, DDE2 | allene oxide synthase | chr5:17097803-17099359 REVERSE LENGTH=518	LOC_Os03g55800.1	protein|cytochrome P450, putative, expressed	NA	NA	GO:0000096|sulfur amino acid metabolic process GO:0000165|MAPK cascade GO:0002831|regulation of response to biotic stimulus GO:0006546|glycine catabolic process GO:0006569|tryptophan catabolic process GO:0006612|protein targeting to membrane GO:0006636|unsaturated fatty acid biosynthetic process GO:0006733|oxidoreduction coenzyme metabolic process GO:0006766|vitamin metabolic process GO:0006952|defense response GO:0008652|cellular amino acid biosynthetic process GO:0009072|aromatic amino acid family metabolic process GO:0009106|lipoate metabolic process GO:0009108|coenzyme biosynthetic process GO:0009117|nucleotide metabolic process GO:0009416|response to light stimulus GO:0009595|detection of biotic stimulus GO:0009611|response to wounding GO:0009620|response to fungus GO:0009684|indoleacetic acid biosynthetic process GO:0009694|jasmonic acid metabolic process GO:0009695|jasmonic acid biosynthetic process GO:0009697|salicylic acid biosynthetic process GO:0009753|response to jasmonic acid stimulus GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0015994|chlorophyll metabolic process GO:0019216|regulation of lipid metabolic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019373|epoxygenase P450 pathway GO:0019748|secondary metabolic process GO:0019761|glucosinolate biosynthetic process GO:0031348|negative regulation of defense response GO:0031407|oxylipin metabolic process GO:0031408|oxylipin biosynthetic process GO:0042742|defense response to bacterium GO:0043900|regulation of multi-organism process GO:0044272|sulfur compound biosynthetic process GO:0050832|defense response to fungus GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0009978|allene oxide synthase activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0016836|hydro-lyase activity GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009579|thylakoid GO:0009941|chloroplast envelope GO:0010287|plastoglobule GO:0016020|membrane
pt2_06319	A	A1S	Potri.002G130800	Potri.002G130800(AS)	POPTR_0002s13230	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0006346|methylation-dependent chromatin silencing GO:0008150|biological_process GO:0009855|determination of bilateral symmetry GO:0009909|regulation of flower development GO:0010014|meristem initiation GO:0010073|meristem maintenance GO:0016246|RNA interference GO:0016570|histone modification GO:0031047|gene silencing by RNA GO:0031048|chromatin silencing by small RNA GO:0048449|floral organ formation GO:0051567|histone H3-K9 methylation	NA	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06320	B	B1S	Potri.002G130900	Potri.002G130900(BS)	POPTR_0002s13240	sp|P0C7R1|PPR74_ARATH	Pentatricopeptide repeat-containing protein At1g47580, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H50 PE=2 SV=1	AT1G47580.1	| Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:17485668-17486387 FORWARD LENGTH=239	LOC_Os01g53610.1	protein|selenium-binding protein, related, putative, expressed	IMGA|Medtr1g071240.1	Pentatricopeptide repeat-containing protein chr1 17511913-17505644 H EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005739|mitochondrion
pt2_06321	A	A1S	Potri.002G131100	Potri.002G131100(AS)	POPTR_0002s13250	NA	NA	NA	NA	LOC_Os03g52910.1	protein|uncharacterized UPF0114 domain containing protein, expressed	NA	NA	NA	NA	NA
pt2_06322	A	A1S	Potri.002G131200	Potri.002G131200(AS)	POPTR_0002s13260	sp|Q8W468|ARI8_ARATH	Probable E3 ubiquitin-protein ligase ARI8 OS=Arabidopsis thaliana GN=ARI8 PE=2 SV=1	AT1G65430.1	| Symbols: ARI8, ATARI8 | IBR domain-containing protein | chr1:24301165-24306159 REVERSE LENGTH=567	LOC_Os04g41470.1	protein|expressed protein	IMGA|Medtr5g097670.1	hypothetical protein chr5 41742596-41741393 E EGN_Mt100125 20111014	NA	GO:0003676|nucleic acid binding GO:0004842|ubiquitin-protein ligase activity GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_06323	A	A1S	Potri.002G131300	Potri.002G131300(AS)	POPTR_0002s13270	sp|Q8W468|ARI8_ARATH	Probable E3 ubiquitin-protein ligase ARI8 OS=Arabidopsis thaliana GN=ARI8 PE=2 SV=1	AT1G65430.1	| Symbols: ARI8, ATARI8 | IBR domain-containing protein | chr1:24301165-24306159 REVERSE LENGTH=567	LOC_Os04g41470.1	protein|expressed protein	IMGA|Medtr5g097670.1	hypothetical protein chr5 41742596-41741393 E EGN_Mt100125 20111014	NA	GO:0003676|nucleic acid binding GO:0004842|ubiquitin-protein ligase activity GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_06324	A	A1S	Potri.002G131400	Potri.002G131400(AS)	POPTR_0002s13280	sp|Q9SX85|SEC3A_ARATH	Exocyst complex component SEC3A OS=Arabidopsis thaliana GN=SEC3A PE=1 SV=1	AT1G47550.1	| Symbols: SEC3A | exocyst complex component sec3A | chr1:17457171-17463896 FORWARD LENGTH=887	LOC_Os03g42750.1	protein|roothairless 1, putative, expressed	IMGA|contig_56280_1.1	Exocyst complex component contig_56280 1013-4220 H PREDN 20111014	GO:0008150|biological_process	NA	GO:0000145|exocyst GO:0005886|plasma membrane
pt2_06325	A	A1S	Potri.002G131500	Potri.002G131500(AS)	POPTR_0002s13290	NA	NA	AT5G42655.1	| Symbols: | Disease resistance-responsive (dirigent-like protein) family protein | chr5:17102213-17102602 REVERSE LENGTH=129	LOC_Os03g52920.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_06326	A	A1S	Potri.002G131600	Potri.002G131600(AS)	POPTR_0002s13300	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06327	A	A1S	Potri.002G131900	Potri.002G131900(AS)	POPTR_0002s13310	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06328	A	A1S	Potri.002G132100	Potri.002G132100(AS)	POPTR_0002s13320	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06329	A	A2S	Potri.002G132200	Potri.002G132200(AS) Potri.014G039600(DS)	POPTR_0002s13330	sp|Q9XJ27|RR9_ARATH	30S ribosomal protein S9, chloroplastic OS=Arabidopsis thaliana GN=RPS9 PE=2 SV=1	AT1G74970.1	| Symbols: RPS9, TWN3 | ribosomal protein S9 | chr1:28157761-28159202 REVERSE LENGTH=208	LOC_Os03g55930.1	protein|ribosomal protein, putative, expressed	IMGA|Medtr1g021760.1	30S ribosomal protein S9 chr1 6711479-6709259 F EGN_Mt100125 20111014	GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0000312|plastid small ribosomal subunit GO:0005622|intracellular GO:0005840|ribosome GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope GO:0016020|membrane GO:0022627|cytosolic small ribosomal subunit
pt2_06330	A	A1S	Potri.002G132300	Potri.002G132300(AS)	POPTR_0002s13340	sp|Q9LYT3|TT12_ARATH	Protein TRANSPARENT TESTA 12 OS=Arabidopsis thaliana GN=TT12 PE=2 SV=1	AT1G47530.1	| Symbols: | MATE efflux family protein | chr1:17451724-17454110 FORWARD LENGTH=484	LOC_Os08g43654.1	protein|MATE efflux family protein, putative, expressed	IMGA|Medtr5g033100.1	Protein TRANSPARENT TESTA chr5 13846849-13839241 E EGN_Mt100125 20111014	GO:0006855|drug transmembrane transport GO:0009835|fruit ripening GO:0055085|transmembrane transport	GO:0005215|transporter activity GO:0015238|drug transmembrane transporter activity GO:0015297|antiporter activity	GO:0005774|vacuolar membrane GO:0005886|plasma membrane GO:0016020|membrane
pt2_06331	A	A1S	Potri.002G132400	Potri.002G132400(AS)	POPTR_0002s13350	sp|Q9FZ70|FDL1_ARATH	F-box/FBD/LRR-repeat protein At1g13570 OS=Arabidopsis thaliana GN=At1g13570 PE=2 SV=1	AT1G13570.1	| Symbols: | F-box/RNI-like superfamily protein | chr1:4642528-4643930 REVERSE LENGTH=416	LOC_Os02g33400.1	protein|OsFBL9 - F-box domain and LRR containing protein, expressed	IMGA|Medtr1g021710.2	F-box/FBD/LRR-repeat protein chr1 6688408-6679357 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_06332	A	A1S	Potri.002G132500	Potri.002G132500(AS)	POPTR_0002s13360	sp|Q9FIH9|CML37_ARATH	Calcium-binding protein CML37 OS=Arabidopsis thaliana GN=CML37 PE=2 SV=1	AT5G42380.1	| Symbols: CML39, CML37 | calmodulin like 37 | chr5:16942758-16943315 REVERSE LENGTH=185	LOC_Os01g72550.1	protein|OsCML19 - Calmodulin-related calcium sensor protein, expressed	IMGA|Medtr5g079340.1	Polcalcin Nic t chr5 32914810-32913864 F EGN_Mt100125 20111014	GO:0009693|ethylene biosynthetic process GO:0010193|response to ozone GO:0010286|heat acclimation GO:0030968|endoplasmic reticulum unfolded protein response GO:0052542|defense response by callose deposition	GO:0005509|calcium ion binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_06333	A	A1S	Potri.002G132600	Potri.002G132600(AS)	POPTR_0002s13370	sp|Q5EAF2|IP5PB_ARATH	Type I inositol 1,4,5-trisphosphate 5-phosphatase 11 OS=Arabidopsis thaliana GN=At1g47510 PE=2 SV=1	AT1G47510.2	| Symbols: 5PTASE11 | inositol polyphosphate 5-phosphatase 11 | chr1:17435991-17438296 REVERSE LENGTH=271	LOC_Os03g42810.1	protein|endonuclease/exonuclease/phosphatase family domain containing protein, expressed	NA	NA	GO:0006499|N-terminal protein myristoylation GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009753|response to jasmonic acid stimulus GO:0046854|phosphatidylinositol phosphorylation GO:0046856|phosphatidylinositol dephosphorylation	GO:0004439|phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity GO:0016787|hydrolase activity GO:0034485|phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity GO:0043813|phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity	GO:0005737|cytoplasm
pt2_06334	A	A2S	Potri.002G132700	Potri.002G132700(AS) Potri.014G039900(BS)	POPTR_0002s13380	sp|P0C7Q8|DA1_ARATH	Protein DA1 OS=Arabidopsis thaliana GN=DA1 PE=1 SV=1	AT1G19270.1	| Symbols: DA1 | DA1 | chr1:6663327-6665845 FORWARD LENGTH=532	LOC_Os06g08400.2	protein|LIM domain-containing protein, putative, expressed	IMGA|Medtr5g018900.1	LIM and UIM domain-containing chr5 6831561-6837515 E EGN_Mt100125 20111014	GO:0046621|negative regulation of organ growth GO:0048317|seed morphogenesis GO:0048482|ovule morphogenesis	GO:0008270|zinc ion binding GO:0043130|ubiquitin binding	GO:0005634|nucleus
pt2_06335	A	A2S	Potri.002G132700	Potri.002G132700(AS) Potri.014G039900(DS)	POPTR_0002s13380	sp|P0C7Q8|DA1_ARATH	Protein DA1 OS=Arabidopsis thaliana GN=DA1 PE=1 SV=1	AT1G19270.1	| Symbols: DA1 | DA1 | chr1:6663327-6665845 FORWARD LENGTH=532	LOC_Os06g08400.2	protein|LIM domain-containing protein, putative, expressed	IMGA|Medtr5g018900.1	LIM and UIM domain-containing chr5 6831561-6837515 E EGN_Mt100125 20111014	GO:0046621|negative regulation of organ growth GO:0048317|seed morphogenesis GO:0048482|ovule morphogenesis	GO:0008270|zinc ion binding GO:0043130|ubiquitin binding	GO:0005634|nucleus
pt2_06336	A	A2S	Potri.002G132800	Potri.002G132800(AS) Potri.002G132700(AA)	POPTR_0002s13390	sp|Q9M0X5|CRK25_ARATH	Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1	AT4G05200.1	| Symbols: CRK25 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25 | chr4:2679793-2682309 REVERSE LENGTH=675	LOC_Os02g45750.1	protein|protein kinase domain containing protein, expressed	IMGA|Medtr5g085790.1	Wall-associated receptor kinase-like protein chr5 36049307-36053113 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0010200|response to chitin GO:0016998|cell wall macromolecule catabolic process	GO:0008061|chitin binding GO:0016301|kinase activity	GO:0005576|extracellular region GO:0005886|plasma membrane
pt2_06337	A	A2S	Potri.002G132900	Potri.002G132900(AS) Potri.014G040300(DS)	POPTR_0002s13400	sp|Q9LN68|GATL1_ARATH	Probable galacturonosyltransferase-like 1 OS=Arabidopsis thaliana GN=GATL1 PE=2 SV=1	AT1G19300.1	| Symbols: GATL1, PARVUS, GLZ1, ATGATL1 | Nucleotide-diphospho-sugar transferases superfamily protein | chr1:6671451-6672506 REVERSE LENGTH=351	LOC_Os03g47530.1	protein|glycosyl transferase 8 domain containing protein, putative, expressed	IMGA|Medtr5g019220.1	Glycosyltransferase family GT8 protein chr5 7010232-7008724 H EGN_Mt100125 20111014	GO:0006569|tryptophan catabolic process GO:0006612|protein targeting to membrane GO:0009684|indoleacetic acid biosynthetic process GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010051|xylem and phloem pattern formation GO:0010363|regulation of plant-type hypersensitive response GO:0010417|glucuronoxylan biosynthetic process GO:0016051|carbohydrate biosynthetic process GO:0019344|cysteine biosynthetic process GO:0032504|multicellular organism reproduction GO:0048366|leaf development GO:0052386|cell wall thickening	GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups GO:0047262|polygalacturonate 4-alpha-galacturonosyltransferase activity	GO:0005783|endoplasmic reticulum
pt2_06338	A	A1S	Potri.002G133000	Potri.002G133000(AS)	POPTR_0002s13410	sp|Q09463|RNF5_CAEEL	RING finger protein 5 OS=Caenorhabditis elegans GN=rnf-5 PE=1 SV=1	AT1G19310.1	| Symbols: | RING/U-box superfamily protein | chr1:6676424-6677104 REVERSE LENGTH=226	LOC_Os12g43930.1	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr5g019300.1	RING finger protein chr5 7035768-7034421 F EGN_Mt100125 20111014	NA	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_06339	A	A1S	Potri.002G133100	Potri.002G133100(AS)	POPTR_0002s13420	sp|Q8L4Y2|LPAT4_ARATH	Probable 1-acyl-sn-glycerol-3-phosphate acyltransferase 4 OS=Arabidopsis thaliana GN=LPAT4 PE=2 SV=1	AT1G75020.2	| Symbols: LPAT4 | lysophosphatidyl acyltransferase 4 | chr1:28171779-28173357 FORWARD LENGTH=378	LOC_Os01g57360.1	protein|acyltransferase, putative, expressed	NA	NA	GO:0006655|phosphatidylglycerol biosynthetic process GO:0008152|metabolic process GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway	GO:0016746|transferase activity, transferring acyl groups	NA
pt2_06340	A	A1S	Potri.002G133200	Potri.002G133200(AS)	POPTR_0002s13430	sp|P28493|PR5_ARATH	Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1	AT1G75030.1	| Symbols: ATLP-3, TLP-3 | thaumatin-like protein 3 | chr1:28174418-28175255 FORWARD LENGTH=246	LOC_Os04g59370.1	protein|thaumatin, putative, expressed	IMGA|Medtr5g059200.1	Pathogenesis-related protein chr5 23780576-23781889 E EGN_Mt100125 20111014	GO:0051707|response to other organism	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_06341	G	G1	NA	NA	POPTR_0002s13440	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06342	A	A1S	Potri.002G133400	Potri.002G133400(AS)	POPTR_0002s13450	NA	NA	AT2G23790.1	| Symbols: | Protein of unknown function (DUF607) | chr2:10125692-10127455 REVERSE LENGTH=336	LOC_Os10g35770.1	protein|E2F-related protein, putative, expressed	IMGA|Medtr5g019350.1	Coiled-coil domain-containing protein 109A chr5 7044583-7042757 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_06343	A	A1S	Potri.002G133500	Potri.002G133500(AS)	POPTR_0002s13460	NA	NA	AT1G75060.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19330.2); Has 104 Blast hits to 104 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 104; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:28181481-28183285 REVERSE LENGTH=242	LOC_Os10g21460.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06344	G	G1	NA	NA	POPTR_0002s13470	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06345	A	A1S	Potri.002G133700	Potri.002G133700(AS)	POPTR_0002s13480	sp|Q8S307|BZR1_ARATH	Protein BRASSINAZOLE-RESISTANT 1 OS=Arabidopsis thaliana GN=BZR1 PE=1 SV=1	AT1G75080.2	| Symbols: BZR1 | Brassinosteroid signalling positive regulator (BZR1) family protein | chr1:28185709-28187063 FORWARD LENGTH=336	LOC_Os07g39220.1	protein|BES1/BZR1 homolog protein, putative, expressed	IMGA|Medtr5g019550.1	BES1/BZR1-like protein chr5 7137260-7139041 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009742|brassinosteroid mediated signaling pathway GO:0045892|negative regulation of transcription, DNA-dependent GO:0048316|seed development GO:0048481|ovule development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus GO:0005829|cytosol
pt2_06346	A	A1S	Potri.002G133800	Potri.002G133800(AS)	POPTR_0002s13490	sp|Q7VG78|GUAA_HELHP	Probable GMP synthase [glutamine-hydrolyzing] OS=Helicobacter hepaticus (strain ATCC 51449 / 3B1) GN=guaA PE=3 SV=1	AT1G75090.1	| Symbols: | DNA glycosylase superfamily protein | chr1:28187647-28189612 REVERSE LENGTH=329	LOC_Os06g44050.1	protein|methyladenine glycosylase, putative, expressed	IMGA|contig_87360_1.1	DNA-3-methyladenine glycosylase I contig_87360 1893-326 F PREDN 20111014	GO:0006281|DNA repair GO:0006284|base-excision repair GO:0006306|DNA methylation	GO:0003824|catalytic activity GO:0008725|DNA-3-methyladenine glycosylase activity	GO:0005634|nucleus
pt2_06347	A	A1S	Potri.002G133900	Potri.002G133900(AS)	POPTR_0002s13500	NA	NA	AT2G39210.1	| Symbols: | Major facilitator superfamily protein | chr2:16366287-16368231 REVERSE LENGTH=601	LOC_Os07g09010.1	protein|nodulin, putative, expressed	IMGA|Medtr5g090570.1	Nodulin-related protein chr5 38409849-38407023 H EGN_Mt100125 20111014	GO:0055085|transmembrane transport	NA	GO:0016021|integral to membrane
pt2_06348	A	A1S	Potri.002G134000	Potri.002G134000(AS)	POPTR_0002s13510	sp|Q9FZF1|PX11A_ARATH	Peroxisomal membrane protein 11A OS=Arabidopsis thaliana GN=PEX11A PE=1 SV=1	AT1G47750.1	| Symbols: PEX11A | peroxin 11A | chr1:17569388-17570134 REVERSE LENGTH=248	LOC_Os03g19010.1	protein|peroxisomal biogenesis factor 11, putative, expressed	NA	NA	GO:0007031|peroxisome organization GO:0016559|peroxisome fission	GO:0003674|molecular_function GO:0005515|protein binding GO:0042802|identical protein binding	GO:0005634|nucleus GO:0005777|peroxisome GO:0005778|peroxisomal membrane GO:0005779|integral to peroxisomal membrane
pt2_06349	A	A1S	Potri.002G134100	Potri.002G134100(AS)	POPTR_0002s13520	sp|Q8NF37|PCAT1_HUMAN	Lysophosphatidylcholine acyltransferase 1 OS=Homo sapiens GN=LPCAT1 PE=1 SV=2	AT1G80950.1	| Symbols: | Phospholipid/glycerol acyltransferase family protein | chr1:30412653-30414935 REVERSE LENGTH=398	LOC_Os05g28960.1	protein|acyltransferase, putative, expressed	NA	NA	GO:0006655|phosphatidylglycerol biosynthetic process GO:0008152|metabolic process	GO:0016746|transferase activity, transferring acyl groups	GO:0005634|nucleus GO:0005783|endoplasmic reticulum
pt2_06350	A	A1S	Potri.002G134200	Potri.002G134200(AS)	POPTR_0002s13530	sp|Q93VG8|PPDEX_ARATH	DeSI-like protein At4g17486 OS=Arabidopsis thaliana GN=At4g17486 PE=2 SV=1	AT1G47740.2	| Symbols: | PPPDE putative thiol peptidase family protein | chr1:17567903-17569035 FORWARD LENGTH=279	LOC_Os03g10200.1	protein|ethylene-responsive element-binding protein, putative, expressed	IMGA|Medtr5g013040.1	hypothetical protein chr5 3837813-3834899 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_06351	A	A2S	Potri.002G134200	Potri.002G134200(AS) Potri.014G042300(DS)	POPTR_0002s13530	sp|Q93VG8|PPDEX_ARATH	DeSI-like protein At4g17486 OS=Arabidopsis thaliana GN=At4g17486 PE=2 SV=1	AT1G47740.2	| Symbols: | PPPDE putative thiol peptidase family protein | chr1:17567903-17569035 FORWARD LENGTH=279	LOC_Os03g10200.1	protein|ethylene-responsive element-binding protein, putative, expressed	IMGA|Medtr5g013040.1	hypothetical protein chr5 3837813-3834899 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_06352	A	A1S	Potri.002G134200	Potri.002G134200(AS)	POPTR_0002s13530	sp|Q93VG8|PPDEX_ARATH	DeSI-like protein At4g17486 OS=Arabidopsis thaliana GN=At4g17486 PE=2 SV=1	AT1G47740.2	| Symbols: | PPPDE putative thiol peptidase family protein | chr1:17567903-17569035 FORWARD LENGTH=279	LOC_Os03g10200.1	protein|ethylene-responsive element-binding protein, putative, expressed	IMGA|Medtr5g013040.1	hypothetical protein chr5 3837813-3834899 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_06353	A	A2S	Potri.002G134300	Potri.002G134300(AS) Potri.004G186100(DS)	POPTR_0002s13540	sp|Q0WQ57|AUXI2_ARATH	Auxilin-related protein 2 OS=Arabidopsis thaliana GN=At4g12770 PE=1 SV=1	AT1G75100.1	| Symbols: JAC1 | J-domain protein required for chloroplast accumulation response 1 | chr1:28191108-28193769 REVERSE LENGTH=651	LOC_Os03g10180.1	protein|expressed protein	NA	NA	GO:0009904|chloroplast accumulation movement	GO:0031072|heat shock protein binding	GO:0005737|cytoplasm GO:0009507|chloroplast
pt2_06354	C	C1S	Potri.002G134300	Potri.002G134300(CS)	sp|Q0WQ57|AUXI2_ARATH	Auxilin-related protein 2 OS=Arabidopsis thaliana GN=At4g12770 PE=1 SV=1	AT1G75100.1	| Symbols: JAC1 | J-domain protein required for chloroplast accumulation response 1 | chr1:28191108-28193769 REVERSE LENGTH=651	LOC_Os03g10180.1	protein|expressed protein	NA	NA	GO:0009904|chloroplast accumulation movement	GO:0031072|heat shock protein binding	GO:0005737|cytoplasm GO:0009507|chloroplast
pt2_06355	A	A2S	Potri.002G134300	Potri.002G134300(AS) Potri.004G186100(BS)	POPTR_0002s13540	sp|Q0WQ57|AUXI2_ARATH	Auxilin-related protein 2 OS=Arabidopsis thaliana GN=At4g12770 PE=1 SV=1	AT1G75100.1	| Symbols: JAC1 | J-domain protein required for chloroplast accumulation response 1 | chr1:28191108-28193769 REVERSE LENGTH=651	LOC_Os03g10180.1	protein|expressed protein	NA	NA	GO:0009904|chloroplast accumulation movement	GO:0031072|heat shock protein binding	GO:0005737|cytoplasm GO:0009507|chloroplast
pt2_06356	A	A1S	Potri.002G134400	Potri.002G134400(AS)	POPTR_0002s13550	NA	NA	AT1G19360.1	| Symbols: | Nucleotide-diphospho-sugar transferase family protein | chr1:6690672-6692211 REVERSE LENGTH=428	LOC_Os07g39840.1	protein|expressed protein	IMGA|contig_184652_1.1	Glycosyltransferase family 77 protein contig_184652 130-978 H PREDN 20111014	GO:0009744|response to sucrose stimulus GO:0009749|response to glucose stimulus GO:0009750|response to fructose stimulus GO:0080147|root hair cell development	NA	GO:0005768|endosome GO:0005783|endoplasmic reticulum GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_06357	A	A1S	Potri.002G134500	Potri.002G134500(AS)	POPTR_0002s13560	sp|O48786|C734A_ARATH	Cytochrome P450 734A1 OS=Arabidopsis thaliana GN=CYP734A1 PE=2 SV=1	AT1G75130.1	| Symbols: CYP721A1 | cytochrome P450, family 721, subfamily A, polypeptide 1 | chr1:28200073-28201911 REVERSE LENGTH=505	LOC_Os05g33600.1	protein|cytochrome P450 72A1, putative, expressed	IMGA|Medtr5g095230.1	Cytochrome P450 monooxygenase CYP72A59 chr5 40593237-40587821 E EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	NA
pt2_06358	A	A1S	Potri.002G134600	Potri.002G134600(AS)	POPTR_0002s13570	sp|O04905|UMPK_ARATH	UMP/CMP kinase OS=Arabidopsis thaliana GN=PYR6 PE=1 SV=1	AT5G26667.1	| Symbols: PYR6 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:9276659-9277788 FORWARD LENGTH=208	LOC_Os02g53790.1	protein|adenylate kinase, putative, expressed	IMGA|Medtr5g068940.1	Adenylate kinase chr5 28195242-28191227 F EGN_Mt100125 20111014	GO:0006139|nucleobase-containing compound metabolic process GO:0009173|pyrimidine ribonucleoside monophosphate metabolic process GO:0046939|nucleotide phosphorylation	GO:0004127|cytidylate kinase activity GO:0005524|ATP binding GO:0009041|uridylate kinase activity GO:0016776|phosphotransferase activity, phosphate group as acceptor GO:0019201|nucleotide kinase activity GO:0019205|nucleobase-containing compound kinase activity	GO:0005737|cytoplasm GO:0005829|cytosol GO:0048046|apoplast
pt2_06359	A	A2S	Potri.002G134800	Potri.002G134800(AS) Potri.002G134900(AA)	POPTR_0002s13580	sp|O64792|PIGP_ARATH	Phosphatidylinositol N-acetylglucosaminyltransferase subunit P OS=Arabidopsis thaliana GN=At1g61280 PE=2 SV=1	AT2G39445.1	| Symbols: | Phosphatidylinositol N-acetylglucosaminyltransferase, GPI19/PIG-P subunit | chr2:16470025-16471125 REVERSE LENGTH=181	LOC_Os03g43900.1	protein|phosphatidylinositol N-acetylglucosaminyltransferase subunit P, putative, expressed	IMGA|contig_53359_1.1	Phosphatidylinositol N-acetylglucosaminyltransferase subunit P contig_53359 2129-358 I PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_06360	A	A2S	Potri.002G134900	Potri.002G134900(AS) Potri.002G134800(AA)	POPTR_0002s13590	sp|Q8SVJ8|NOG1_ENCCU	Nucleolar GTP-binding protein 1 OS=Encephalitozoon cuniculi (strain GB-M1) GN=NOG1 PE=3 SV=1	AT1G80770.1	| Symbols: PDE318 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:30355266-30357786 FORWARD LENGTH=451	LOC_Os08g06230.1	protein|nucleolar GTP-binding protein 1, putative, expressed	NA	NA	GO:0015684|ferrous iron transport	GO:0005525|GTP binding GO:0015093|ferrous iron transmembrane transporter activity	GO:0005634|nucleus GO:0016021|integral to membrane
pt2_06361	A	A1S	Potri.002G135000	Potri.002G135000(AS)	POPTR_0002s13600	NA	NA	AT2G38740.1	| Symbols: | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr2:16194639-16195995 REVERSE LENGTH=244	LOC_Os10g41930.2	protein|haloacid dehalogenase-like hydrolase family protein, putative, expressed	IMGA|Medtr5g013910.1	Pyrophosphatase ppaX chr5 4329631-4331624 F EGN_Mt100125 20111014	GO:0008152|metabolic process	GO:0003824|catalytic activity GO:0016787|hydrolase activity	GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane
pt2_06362	A	A2S	Potri.002G135100	Potri.002G135100(AS) Potri.014G043600(BS)	POPTR_0002s13610	sp|Q9FNX5|DRP1E_ARATH	Dynamin-related protein 1E OS=Arabidopsis thaliana GN=DRP1E PE=1 SV=1	AT3G60190.1	| Symbols: ADL4, ADLP2, EDR3, DRP1E, ADL1E, DL1E | DYNAMIN-like 1E | chr3:22244367-22247651 REVERSE LENGTH=624	LOC_Os10g41820.1	protein|dynamin family protein, putative, expressed	IMGA|Medtr5g009150.1	Dynamin-related protein 1A chr5 1886432-1881144 H EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0002831|regulation of response to biotic stimulus GO:0006612|protein targeting to membrane GO:0009595|detection of biotic stimulus GO:0009697|salicylic acid biosynthetic process GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0016192|vesicle-mediated transport GO:0031348|negative regulation of defense response GO:0042742|defense response to bacterium GO:0043900|regulation of multi-organism process GO:0046686|response to cadmium ion GO:0050832|defense response to fungus	GO:0003924|GTPase activity GO:0005525|GTP binding	GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_06363	A	A2S	Potri.002G135100	Potri.002G135100(AS) Potri.014G043600(DS)	POPTR_0002s13620	sp|Q9FNX5|DRP1E_ARATH	Dynamin-related protein 1E OS=Arabidopsis thaliana GN=DRP1E PE=1 SV=1	AT3G60190.1	| Symbols: ADL4, ADLP2, EDR3, DRP1E, ADL1E, DL1E | DYNAMIN-like 1E | chr3:22244367-22247651 REVERSE LENGTH=624	LOC_Os10g41820.1	protein|dynamin family protein, putative, expressed	IMGA|Medtr5g009150.1	Dynamin-related protein 1A chr5 1886432-1881144 H EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0002831|regulation of response to biotic stimulus GO:0006612|protein targeting to membrane GO:0009595|detection of biotic stimulus GO:0009697|salicylic acid biosynthetic process GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0016192|vesicle-mediated transport GO:0031348|negative regulation of defense response GO:0042742|defense response to bacterium GO:0043900|regulation of multi-organism process GO:0046686|response to cadmium ion GO:0050832|defense response to fungus	GO:0003924|GTPase activity GO:0005525|GTP binding	GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_06364	A	A1S	Potri.002G135300	Potri.002G135300(AS)	POPTR_0002s13630	sp|P37221|MAOM_SOLTU	NAD-dependent malic enzyme 62 kDa isoform, mitochondrial OS=Solanum tuberosum PE=1 SV=1	AT2G13560.1	| Symbols: NAD-ME1 | NAD-dependent malic enzyme 1 | chr2:5650089-5655103 FORWARD LENGTH=623	LOC_Os07g31380.1	protein|NAD-dependent malic enzyme, mitochondrial precursor, putative, expressed	NA	NA	GO:0006096|glycolysis GO:0006108|malate metabolic process GO:0006833|water transport GO:0006972|hyperosmotic response GO:0007030|Golgi organization GO:0009266|response to temperature stimulus GO:0009651|response to salt stress GO:0046686|response to cadmium ion GO:0055114|oxidation-reduction process	GO:0004470|malic enzyme activity GO:0004471|malate dehydrogenase (decarboxylating) activity GO:0005515|protein binding GO:0005524|ATP binding GO:0008270|zinc ion binding GO:0016652|oxidoreductase activity, acting on NADH or NADPH, NAD or NADP as acceptor GO:0042803|protein homodimerization activity GO:0050897|cobalt ion binding	GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_06365	A	A1S	Potri.002G135400	Potri.002G135400(AS)	POPTR_0002s13640	NA	NA	AT2G44600.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G60200.1); Has 56 Blast hits to 55 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr2:18408845-18409786 FORWARD LENGTH=313	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0005886|plasma membrane
pt2_06366	A	A1S	Potri.002G135500	Potri.002G135500(AS)	POPTR_0002s13650	sp|O80501|RAH1B_ARATH	Ras-related protein RABH1b OS=Arabidopsis thaliana GN=RABH1B PE=1 SV=1	AT2G44610.1	| Symbols: RAB6, ATRABH1B, ATRAB6A, RAB6A | Ras-related small GTP-binding family protein | chr2:18411778-18413883 REVERSE LENGTH=208	LOC_Os07g31370.1	protein|ras-related protein, putative, expressed	IMGA|Medtr5g013900.1	Ras-related protein Rab-6 chr5 4324275-4328602 E EGN_Mt100125 20111014	GO:0006891|intra-Golgi vesicle-mediated transport GO:0006944|cellular membrane fusion GO:0007264|small GTPase mediated signal transduction GO:0015031|protein transport GO:0032940|secretion by cell	GO:0005515|protein binding GO:0005525|GTP binding	GO:0000139|Golgi membrane GO:0005768|endosome GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0005829|cytosol GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane
pt2_06367	A	A1S	Potri.002G135600	Potri.002G135600(AS)	POPTR_0002s13660	sp|P53665|ACPM1_ARATH	Acyl carrier protein 1, mitochondrial OS=Arabidopsis thaliana GN=MTACP1 PE=2 SV=1	AT2G44620.1	| Symbols: MTACP-1, MTACP1 | mitochondrial acyl carrier protein 1 | chr2:18414320-18415065 FORWARD LENGTH=122	LOC_Os07g12150.1	protein|acyl carrier protein, putative, expressed	NA	NA	GO:0006633|fatty acid biosynthetic process GO:0010267|production of ta-siRNAs involved in RNA interference GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0051607|defense response to virus	GO:0000036|ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process GO:0031177|phosphopantetheine binding	GO:0005739|mitochondrion GO:0005759|mitochondrial matrix
pt2_06368	C	C1A	Potri.002G135800	Potri.002G135800(CA)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06369	A	A1S	Potri.002G135900	Potri.002G135900(AS)	POPTR_0002s13680	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06370	A	A1S	Potri.002G136000	Potri.002G136000(AS)	POPTR_0002s13690	NA	NA	AT1G02180.1	| Symbols: | ferredoxin-related | chr1:413619-414505 REVERSE LENGTH=226	LOC_Os02g58740.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_06371	A	A1S	Potri.002G136200	Potri.002G136200(AS)	POPTR_0002s13700	NA	NA	AT3G60410.3	| Symbols: | Protein of unknown function (DUF1639) | chr3:22331612-22332680 FORWARD LENGTH=324	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_06372	A	A1S	Potri.002G136200	Potri.002G136200(AS)	POPTR_0002s13700	NA	NA	AT3G60410.3	| Symbols: | Protein of unknown function (DUF1639) | chr3:22331612-22332680 FORWARD LENGTH=324	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_06373	A	A1S	Potri.002G136300	Potri.002G136300(AS)	POPTR_0002s13710	NA	NA	NA	NA	NA	NA	IMGA|Medtr5g024310.1	Glutamate receptor 3.6 chr5 9531888-9530414 H EGN_Mt100125 20111014	NA	NA	NA
pt2_06374	A	A1S	Potri.002G136400	Potri.002G136400(AS)	POPTR_0002s13720	sp|P46602|HAT3_ARATH	Homeobox-leucine zipper protein HAT3 OS=Arabidopsis thaliana GN=HAT3 PE=2 SV=2	AT3G60390.1	| Symbols: HAT3 | homeobox-leucine zipper protein 3 | chr3:22320788-22322370 REVERSE LENGTH=315	LOC_Os09g27450.1	protein|homeobox associated leucine zipper, putative, expressed	IMGA|Medtr5g013010.1	Homeobox-leucine zipper protein HOX17 chr5 3801008-3802889 F EGN_Mt100125 20111014	GO:0006351|transcription, DNA-dependent GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_06375	G	G1	NA	NA	POPTR_0002s13725	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06376	A	A1S	Potri.002G136500	Potri.002G136500(AS)	POPTR_0002s13730	NA	NA	AT4G01710.1	| Symbols: CRK, ARPC5 | ARP2/3 complex 16 kDa subunit (p16-Arc) | chr4:735776-736450 FORWARD LENGTH=132	LOC_Os11g35360.1	protein|actin polymerization factor, putative, expressed	NA	NA	GO:0007015|actin filament organization GO:0009825|multidimensional cell growth GO:0010090|trichome morphogenesis GO:0030036|actin cytoskeleton organization GO:0030041|actin filament polymerization GO:0030833|regulation of actin filament polymerization	GO:0003779|actin binding	GO:0005737|cytoplasm GO:0005856|cytoskeleton GO:0005885|Arp2/3 protein complex
pt2_06377	A	A1S	Potri.002G136600	Potri.002G136600(AS)	POPTR_0002s13740	NA	NA	AT3G60380.1	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT4G16790.1); Has 6102 Blast hits to 3981 proteins in 424 species: Archae - 6; Bacteria - 372; Metazoa - 2603; Fungi - 655; Plants - 291; Viruses - 28; Other Eukaryotes - 2147 (source: NCBI BLink). | chr3:22316913-22319144 REVERSE LENGTH=743	NA	NA	NA	NA	NA	NA	GO:0005634|nucleus
pt2_06378	A	A2S	Potri.002G136700	Potri.002G136700(AS) Potri.014G045500(DS)	POPTR_0002s13750	sp|Q9ZQP1|DSP8_ARATH	Putative dual specificity protein phosphatase DSP8 OS=Arabidopsis thaliana GN=DSP8 PE=2 SV=2	AT2G35680.1	| Symbols: | Phosphotyrosine protein phosphatases superfamily protein | chr2:14997004-14998590 REVERSE LENGTH=337	LOC_Os10g41240.1	protein|dual specificity protein phosphatase, putative, expressed	NA	NA	GO:0006470|protein dephosphorylation GO:0007243|intracellular protein kinase cascade GO:0016311|dephosphorylation GO:0043407|negative regulation of MAP kinase activity GO:0046855|inositol phosphate dephosphorylation	GO:0004439|phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity GO:0004725|protein tyrosine phosphatase activity GO:0008138|protein tyrosine/serine/threonine phosphatase activity GO:0016791|phosphatase activity	GO:0005737|cytoplasm
pt2_06379	B	B1S	Potri.002G136800	Potri.002G136800(BS)	POPTR_0002s13760	sp|Q0WRJ7|FK202_ARATH	Peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic OS=Arabidopsis thaliana GN=FKBP20-2 PE=1 SV=1	AT3G60370.1	| Symbols: | FKBP-like peptidyl-prolyl cis-trans isomerase family protein | chr3:22315000-22316533 REVERSE LENGTH=242	NA	NA	NA	NA	GO:0006364|rRNA processing GO:0006457|protein folding GO:0009902|chloroplast relocation GO:0010027|thylakoid membrane organization GO:0010207|photosystem II assembly GO:0018208|peptidyl-proline modification GO:0019761|glucosinolate biosynthetic process GO:0035304|regulation of protein dephosphorylation GO:0042793|transcription from plastid promoter GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003755|peptidyl-prolyl cis-trans isomerase activity GO:0005528|FK506 binding GO:0016491|oxidoreductase activity	GO:0005576|extracellular region GO:0009507|chloroplast GO:0009543|chloroplast thylakoid lumen GO:0009579|thylakoid GO:0016020|membrane GO:0031977|thylakoid lumen
pt2_06380	B	B1S	Potri.002G136900	Potri.002G136900(BS)	POPTR_0002s13770	sp|O14036|SMD2_SCHPO	Small nuclear ribonucleoprotein Sm D2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=smd2 PE=1 SV=1	AT3G62840.2	| Symbols: | Small nuclear ribonucleoprotein family protein | chr3:23235727-23236615 REVERSE LENGTH=108	LOC_Os05g24970.2	protein|LSM domain containing protein, expressed	IMGA|Medtr5g097030.1	Small nuclear ribonucleoprotein-like protein chr5 41429945-41432150 F EGN_Mt100125 20111014	GO:0001510|RNA methylation	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005730|nucleolus GO:0005732|small nucleolar ribonucleoprotein complex GO:0005829|cytosol
pt2_06381	A	A1S	Potri.002G137000	Potri.002G137000(AS)	POPTR_0002s13780	sp|Q9C5D6|CAAT9_ARATH	Cationic amino acid transporter 9, chloroplastic OS=Arabidopsis thaliana GN=CAT9 PE=2 SV=1	AT1G05940.1	| Symbols: CAT9 | cationic amino acid transporter 9 | chr1:1801365-1803942 REVERSE LENGTH=569	LOC_Os02g43860.1	protein|amino acid permease, putative, expressed	NA	NA	GO:0003333|amino acid transmembrane transport GO:0006635|fatty acid beta-oxidation GO:0006810|transport GO:0016558|protein import into peroxisome matrix GO:0055085|transmembrane transport	GO:0015171|amino acid transmembrane transporter activity GO:0015326|cationic amino acid transmembrane transporter activity	GO:0005774|vacuolar membrane GO:0009507|chloroplast
pt2_06382	A	A2S	Potri.002G137100	Potri.002G137100(AS) Potri.014G046000(DS)	POPTR_0002s13790	sp|O22161|ADLO1_ARATH	Protein ARABIDILLO 1 OS=Arabidopsis thaliana GN=FBX5 PE=1 SV=1	AT2G44900.1	| Symbols: ARABIDILLO-1, ARABIDILLO1 | ARABIDILLO-1 | chr2:18511719-18515762 REVERSE LENGTH=930	LOC_Os10g41360.1	protein|ARABIDILLO-1, putative, expressed	IMGA|contig_49679_2.1	U-box domain-containing protein contig_49679 4807-2474 E PREDN 20111014	GO:0048527|lateral root development	GO:0004842|ubiquitin-protein ligase activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_06383	C	C1S	Potri.002G137100	Potri.002G137100(CS)	sp|O22161|ADLO1_ARATH	Protein ARABIDILLO 1 OS=Arabidopsis thaliana GN=FBX5 PE=1 SV=1	AT2G44900.1	| Symbols: ARABIDILLO-1, ARABIDILLO1 | ARABIDILLO-1 | chr2:18511719-18515762 REVERSE LENGTH=930	LOC_Os10g41360.1	protein|ARABIDILLO-1, putative, expressed	IMGA|contig_49679_2.1	U-box domain-containing protein contig_49679 4807-2474 E PREDN 20111014	GO:0048527|lateral root development	GO:0004842|ubiquitin-protein ligase activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_06384	A	A1S	Potri.002G137100	Potri.002G137100(AS)	POPTR_0002s13790	sp|O22161|ADLO1_ARATH	Protein ARABIDILLO 1 OS=Arabidopsis thaliana GN=FBX5 PE=1 SV=1	AT2G44900.1	| Symbols: ARABIDILLO-1, ARABIDILLO1 | ARABIDILLO-1 | chr2:18511719-18515762 REVERSE LENGTH=930	LOC_Os10g41360.1	protein|ARABIDILLO-1, putative, expressed	IMGA|contig_49679_2.1	U-box domain-containing protein contig_49679 4807-2474 E PREDN 20111014	GO:0048527|lateral root development	GO:0004842|ubiquitin-protein ligase activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_06385	A	A1S	Potri.002G137200	Potri.002G137200(AS)	POPTR_0002s13810	sp|Q20390|PPT1_CAEEL	Palmitoyl-protein thioesterase 1 OS=Caenorhabditis elegans GN=ppt-1 PE=2 SV=2	AT3G60340.2	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr3:22304395-22306389 FORWARD LENGTH=338	LOC_Os10g41340.1	protein|palmitoyl-protein thioesterase 1 precursor, putative, expressed	IMGA|Medtr5g013020.1	Palmitoyl-protein thioesterase chr5 3819826-3814736 F EGN_Mt100125 20111014	GO:0006464|cellular protein modification process	GO:0008474|palmitoyl-(protein) hydrolase activity	GO:0005773|vacuole GO:0005829|cytosol
pt2_06386	A	A1S	Potri.002G137300	Potri.002G137300(AS)	POPTR_0002s13820	NA	NA	AT2G44850.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: M germinated pollen stage, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0565 (InterPro:IPR018881); Has 106 Blast hits to 106 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 73; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr2:18499770-18500823 FORWARD LENGTH=319	LOC_Os02g43810.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005576|extracellular region
pt2_06387	A	A2S	Potri.002G137400	Potri.002G137400(AS) Potri.014G047200(DS)	POPTR_0002s13830	sp|Q94JU3|CSN7_ARATH	COP9 signalosome complex subunit 7 OS=Arabidopsis thaliana GN=CSN7 PE=1 SV=1	AT1G02090.1	| Symbols: FUS5, CSN7, COP15, ATCSN7 | Proteasome component (PCI) domain protein | chr1:387479-389568 REVERSE LENGTH=260	LOC_Os07g30840.2	protein|proteasome subunit, putative, expressed	NA	NA	GO:0009640|photomorphogenesis GO:0010387|signalosome assembly GO:0010388|cullin deneddylation GO:0016567|protein ubiquitination GO:0016571|histone methylation GO:0016579|protein deubiquitination GO:0045893|positive regulation of transcription, DNA-dependent	GO:0004708|MAP kinase kinase activity GO:0005515|protein binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol GO:0008180|signalosome
pt2_06388	A	A2S	Potri.002G137400	Potri.002G137400(AS) Potri.014G047200(DS)	POPTR_0002s13830	sp|Q94JU3|CSN7_ARATH	COP9 signalosome complex subunit 7 OS=Arabidopsis thaliana GN=CSN7 PE=1 SV=1	AT1G02090.1	| Symbols: FUS5, CSN7, COP15, ATCSN7 | Proteasome component (PCI) domain protein | chr1:387479-389568 REVERSE LENGTH=260	LOC_Os07g30840.2	protein|proteasome subunit, putative, expressed	NA	NA	GO:0009640|photomorphogenesis GO:0010387|signalosome assembly GO:0010388|cullin deneddylation GO:0016567|protein ubiquitination GO:0016571|histone methylation GO:0016579|protein deubiquitination GO:0045893|positive regulation of transcription, DNA-dependent	GO:0004708|MAP kinase kinase activity GO:0005515|protein binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol GO:0008180|signalosome
pt2_06389	C	C1S	Potri.002G137500	Potri.002G137500(CS)	NA	NA	AT1G02100.2	| Symbols: | Leucine carboxyl methyltransferase | chr1:389876-392293 FORWARD LENGTH=306	NA	NA	NA	NA	GO:0048573|photoperiodism, flowering	GO:0008168|methyltransferase activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06390	A	A2S	Potri.002G137600	Potri.002G137600(AS) Potri.014G047400(DS)	POPTR_0002s13850	NA	NA	AT3G60320.1	| Symbols: | Protein of unknown function (DUF630 and DUF632) | chr3:22292073-22295228 REVERSE LENGTH=796	LOC_Os10g41310.1	protein|DUF630/DUF632 domains containing protein, putative, expressed	IMGA|Medtr5g022530.1	hypothetical protein chr5 8631873-8636502 E EGN_Mt100125 20111014	GO:0007020|microtubule nucleation GO:0008150|biological_process GO:0009637|response to blue light GO:0010155|regulation of proton transport GO:0046777|protein autophosphorylation	GO:0003677|DNA binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06391	A	A1S	Potri.002G137700	Potri.002G137700(AS)	POPTR_0002s13860	sp|Q0DCT8|G11A_ORYSJ	Protein kinase G11A OS=Oryza sativa subsp. japonica GN=Os06g0291600 PE=2 SV=1	AT2G44830.1	| Symbols: | Protein kinase superfamily protein | chr2:18490398-18492779 FORWARD LENGTH=765	LOC_Os04g46180.1	protein|AGC_PVPK_like_kin82y.11 - ACG kinases include homologs to PKA, PKG and PKC, expressed	IMGA|contig_80576_1.1	Protein kinase contig_80576 394-3534 E PREDN 20111014	GO:0006468|protein phosphorylation GO:0009855|determination of bilateral symmetry GO:0009887|organ morphogenesis GO:0010014|meristem initiation GO:0010051|xylem and phloem pattern formation GO:0010073|meristem maintenance GO:0010089|xylem development GO:0044036|cell wall macromolecule metabolic process GO:0048439|flower morphogenesis GO:0048519|negative regulation of biological process	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_06392	A	A2S	Potri.002G137800	Potri.002G137800(AS) Potri.014G047600(DS)	POPTR_0002s13870	sp|Q96CP6|GRM1A_HUMAN	GRAM domain-containing protein 1A OS=Homo sapiens GN=GRAMD1A PE=1 SV=2	AT1G02120.1	| Symbols: VAD1 | GRAM domain family protein | chr1:395761-399720 FORWARD LENGTH=598	LOC_Os07g30940.1	protein|expressed protein	NA	NA	GO:0042742|defense response to bacterium GO:0043069|negative regulation of programmed cell death	NA	GO:0005634|nucleus GO:0005783|endoplasmic reticulum
pt2_06393	A	A1S	Potri.002G137800	Potri.002G137800(AS)	POPTR_0002s13880	sp|Q96CP6|GRM1A_HUMAN	GRAM domain-containing protein 1A OS=Homo sapiens GN=GRAMD1A PE=1 SV=2	AT1G02120.1	| Symbols: VAD1 | GRAM domain family protein | chr1:395761-399720 FORWARD LENGTH=598	LOC_Os07g30940.1	protein|expressed protein	NA	NA	GO:0042742|defense response to bacterium GO:0043069|negative regulation of programmed cell death	NA	GO:0005634|nucleus GO:0005783|endoplasmic reticulum
pt2_06394	A	A1S	Potri.002G137900	Potri.002G137900(AS)	POPTR_0002s13890	sp|Q948R1|PLA11_ARATH	Phospholipase A(1) DAD1, chloroplastic OS=Arabidopsis thaliana GN=DAD1 PE=1 SV=1	AT2G44810.1	| Symbols: DAD1 | alpha/beta-Hydrolases superfamily protein | chr2:18479095-18480168 FORWARD LENGTH=357	LOC_Os11g04940.1	protein|phospholipase, putative, expressed	IMGA|contig_239396_1.1	Lipase family protein contig_239396 2101-830 H PREDN 20111014	GO:0006629|lipid metabolic process GO:0009611|response to wounding GO:0009695|jasmonic acid biosynthetic process GO:0009901|anther dehiscence GO:0010152|pollen maturation	GO:0004806|triglyceride lipase activity GO:0008970|phosphatidylcholine 1-acylhydrolase activity GO:0047714|galactolipase activity	GO:0005737|cytoplasm GO:0009507|chloroplast
pt2_06395	A	A1S	Potri.002G138000	Potri.002G138000(AS)	POPTR_0002s13900	sp|Q9QZR0|RNF25_MOUSE	E3 ubiquitin-protein ligase RNF25 OS=Mus musculus GN=Rnf25 PE=1 SV=2	AT3G60300.1	| Symbols: | RWD domain-containing protein | chr3:22285371-22287382 FORWARD LENGTH=366	LOC_Os11g35870.1	protein|RWD domain containing protein, expressed	IMGA|Medtr5g027110.1	hypothetical protein chr5 10997411-11001671 H EGN_Mt100125 20111014	GO:0048573|photoperiodism, flowering	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_06396	A	A1S	Potri.002G138200	Potri.002G138200(AS)	POPTR_0002s13910	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06397	A	A2S	Potri.002G138300	Potri.002G138300(AS) Potri.014G049300(DS)	POPTR_0002s13920	NA	NA	AT4G17520.1	| Symbols: | Hyaluronan / mRNA binding family | chr4:9771496-9773313 FORWARD LENGTH=360	LOC_Os01g52390.1	protein|plasminogen activator inhibitor 1 RNA-binding protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003723|RNA binding	GO:0005634|nucleus GO:0005777|peroxisome GO:0005829|cytosol
pt2_06398	A	A1S	Potri.002G138400	Potri.002G138400(AS)	POPTR_0002s13930	sp|Q05737|YPTM2_MAIZE	GTP-binding protein YPTM2 OS=Zea mays GN=YPTM2 PE=2 SV=1	AT1G02130.1	| Symbols: ATRAB1B, ARA5, ARA-5, ATRABD2A, RABD2A, RA-5 | RAS 5 | chr1:400350-401788 REVERSE LENGTH=203	LOC_Os01g08450.1	protein|ras-related protein, putative, expressed	IMGA|Medtr1g068730.1	Ras-like protein chr1 17072901-17066690 F EGN_Mt100125 20111014	GO:0006888|ER to Golgi vesicle-mediated transport GO:0007264|small GTPase mediated signal transduction GO:0015031|protein transport GO:0046686|response to cadmium ion	GO:0005525|GTP binding	GO:0000139|Golgi membrane GO:0005773|vacuole GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0032588|trans-Golgi network membrane
pt2_06399	A	A1S	Potri.002G138500	Potri.002G138500(AS)	POPTR_0002s13940	sp|O23676|MGN_ARATH	Protein mago nashi homolog OS=Arabidopsis thaliana GN=At1g02140 PE=2 SV=1	AT1G02140.1	| Symbols: MEE63, MAGO, HAP1 | mago nashi family protein | chr1:403467-404401 REVERSE LENGTH=150	LOC_Os12g18880.1	protein|mago nashi, putative, expressed	NA	NA	GO:0007067|mitosis GO:0007530|sex determination GO:0009793|embryo development ending in seed dormancy GO:0010183|pollen tube guidance GO:0010628|positive regulation of gene expression	GO:0005515|protein binding	GO:0005634|nucleus GO:0005654|nucleoplasm GO:0005730|nucleolus GO:0009507|chloroplast GO:0016607|nuclear speck GO:0035145|exon-exon junction complex
pt2_06400	A	A1S	Potri.002G138600	Potri.002G138600(AS)	POPTR_0002s13950	NA	NA	AT2G44760.1	| Symbols: | Domain of unknown function (DUF3598) | chr2:18452937-18454785 REVERSE LENGTH=500	LOC_Os04g46100.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_06401	A	A1S	Potri.002G138700	Potri.002G138700(AS)	POPTR_0002s13960	sp|Q54YW1|ELMOA_DICDI	ELMO domain-containing protein A OS=Dictyostelium discoideum GN=elmoA PE=1 SV=1	AT3G60260.4	| Symbols: | ELMO/CED-12 family protein | chr3:22274303-22276839 FORWARD LENGTH=266	LOC_Os02g43590.1	protein|ELMO/CED-12 family protein, putative, expressed	IMGA|Medtr1g035080.1	hypothetical protein chr1 9746747-9747507 H EGN_Mt100125 20111014	GO:0006909|phagocytosis	GO:0003674|molecular_function	GO:0005737|cytoplasm GO:0005856|cytoskeleton
pt2_06402	A	A1S	Potri.002G138800	Potri.002G138800(AS)	POPTR_0002s13970	sp|P39207|NDK1_ARATH	Nucleoside diphosphate kinase 1 OS=Arabidopsis thaliana GN=NDPK1 PE=1 SV=1	AT4G09320.1	| Symbols: NDPK1 | Nucleoside diphosphate kinase family protein | chr4:5923424-5924366 FORWARD LENGTH=169	LOC_Os10g41410.2	protein|nucleoside diphosphate kinase, putative, expressed	NA	NA	GO:0006165|nucleoside diphosphate phosphorylation GO:0006183|GTP biosynthetic process GO:0006228|UTP biosynthetic process GO:0006241|CTP biosynthetic process GO:0009651|response to salt stress GO:0046686|response to cadmium ion	GO:0004550|nucleoside diphosphate kinase activity GO:0005524|ATP binding	GO:0005737|cytoplasm GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005777|peroxisome GO:0005829|cytosol GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0009507|chloroplast GO:0048046|apoplast
pt2_06403	A	A1S	Potri.002G138900	Potri.002G138900(AS)	POPTR_0002s13980	sp|Q93WY4|WRK12_ARATH	Probable WRKY transcription factor 12 OS=Arabidopsis thaliana GN=WRKY12 PE=2 SV=1	AT2G44745.1	| Symbols: | WRKY family transcription factor | chr2:18447482-18449004 REVERSE LENGTH=218	LOC_Os04g46060.1	protein|WRKY36, expressed	IMGA|Medtr5g074400.1	WRKY transcription factor chr5 30616836-30613078 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009718|anthocyanin-containing compound biosynthetic process	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_06404	A	A1S	Potri.002G139000	Potri.002G139000(AS)	POPTR_0002s13990	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06405	C	C2S	Potri.002G139000	Potri.002G139000(CS) Potri.002G139100(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06406	A	A1S	Potri.002G139200	Potri.002G139200(AS)	POPTR_0002s14010	sp|A8MR93|ALG12_ARATH	Dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase OS=Arabidopsis thaliana GN=ALG12 PE=1 SV=1	AT1G02145.3	| Symbols: ALG12, EBS4 | homolog of asparagine-linked glycosylation 12 | chr1:404627-408485 FORWARD LENGTH=497	LOC_Os04g46050.1	protein|Alg9-like mannosyltransferase protein, putative, expressed	NA	NA	GO:0006487|protein N-linked glycosylation GO:0006506|GPI anchor biosynthetic process GO:0030433|ER-associated protein catabolic process	GO:0000009|alpha-1,6-mannosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups	GO:0031227|intrinsic to endoplasmic reticulum membrane
pt2_06407	A	A1S	Potri.002G139400	Potri.002G139400(AS)	POPTR_0002s14020	sp|Q8LPS6|PPR3_ARATH	Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana GN=At1g02150 PE=2 SV=2	AT1G02150.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:408779-410433 FORWARD LENGTH=524	LOC_Os04g46010.1	protein|PPR repeat domain containing protein, putative, expressed	IMGA|Medtr1g086820.1	Pentatricopeptide repeat-containing protein chr1 23230997-23228554 E EGN_Mt100125 20111014	GO:0006364|rRNA processing GO:0006399|tRNA metabolic process GO:0009658|chloroplast organization GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0045036|protein targeting to chloroplast	NA	GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_06408	A	A1S	Potri.002G139500	Potri.002G139500(AS)	POPTR_0002s14030	NA	NA	AT2G44730.1	| Symbols: | Alcohol dehydrogenase transcription factor Myb/SANT-like family protein | chr2:18437447-18438565 REVERSE LENGTH=372	LOC_Os10g41460.1	protein|transcription factor like protein, putative, expressed	IMGA|Medtr5g017500.1	hypothetical protein chr5 6140380-6141354 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_06409	A	A1S	Potri.002G139600	Potri.002G139600(AS)	POPTR_0002s14040	NA	NA	AT4G17070.1	| Symbols: | peptidyl-prolyl cis-trans isomerases | chr4:9595523-9598066 REVERSE LENGTH=343	LOC_Os03g01090.1	protein|peptidyl-prolyl cis-trans isomerase, cyclophilin type, putative, expressed	IMGA|Medtr5g013540.1	hypothetical protein chr5 4059949-4056014 F EGN_Mt100125 20111014	GO:0006457|protein folding GO:0006979|response to oxidative stress	GO:0003755|peptidyl-prolyl cis-trans isomerase activity	GO:0005737|cytoplasm
pt2_06410	A	A1S	Potri.002G139700	Potri.002G139700(AS)	POPTR_0002s14050	sp|Q7TP47|HNRPQ_RAT	Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus GN=Syncrip PE=2 SV=1	AT2G44710.1	| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr2:18432902-18436629 FORWARD LENGTH=809	LOC_Os04g45930.1	protein|RNA recognition motif containing protein, expressed	IMGA|Medtr1g019150.1	Polyadenylate-binding protein chr1 5864665-5869890 F EGN_Mt100125 20111014	GO:0000398|mRNA splicing, via spliceosome	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	NA
pt2_06411	A	A1S	Potri.002G139800	Potri.002G139800(AS)	POPTR_0002s14060	sp|Q3E6Y3|Y1869_ARATH	Uncharacterized protein At1g28695 OS=Arabidopsis thaliana GN=At1g28695 PE=2 SV=1	AT1G28710.3	| Symbols: | Nucleotide-diphospho-sugar transferase family protein | chr1:10086850-10088025 REVERSE LENGTH=340	LOC_Os03g52160.1	protein|regulatory protein, putative, expressed	IMGA|Medtr1g034810.1	hypothetical protein chr1 9614549-9612886 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005737|cytoplasm
pt2_06412	D	D1S	Potri.002G139800	Potri.002G139800(DS)	POPTR_0002s14070	sp|Q3E6Y3|Y1869_ARATH	Uncharacterized protein At1g28695 OS=Arabidopsis thaliana GN=At1g28695 PE=2 SV=1	AT1G28710.3	| Symbols: | Nucleotide-diphospho-sugar transferase family protein | chr1:10086850-10088025 REVERSE LENGTH=340	LOC_Os03g52160.1	protein|regulatory protein, putative, expressed	IMGA|Medtr1g034810.1	hypothetical protein chr1 9614549-9612886 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005737|cytoplasm
pt2_06413	A	A2S	Potri.002G139900	Potri.002G139900(AS) Potri.014G052100(BS)	POPTR_0002s14080	sp|O80507|CSK2E_ARATH	Putative casein kinase II subunit beta-4 OS=Arabidopsis thaliana GN=At2g44680 PE=2 SV=1	AT2G44680.1	| Symbols: CKB4 | casein kinase II beta subunit 4 | chr2:18426898-18428166 REVERSE LENGTH=283	LOC_Os07g31280.1	protein|casein kinase II subunit beta-4, putative, expressed	IMGA|Medtr5g013590.1	Casein kinase II subunit beta-4 chr5 4087278-4091049 F EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0007623|circadian rhythm GO:0016567|protein ubiquitination GO:0042753|positive regulation of circadian rhythm GO:0048573|photoperiodism, flowering GO:0071900|regulation of protein serine/threonine kinase activity	GO:0004674|protein serine/threonine kinase activity GO:0005515|protein binding GO:0019887|protein kinase regulator activity	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005956|protein kinase CK2 complex
pt2_06414	A	A1S	Potri.002G140000	Potri.002G140000(AS)	POPTR_0002s14090	sp|Q8RY89|PI5K8_ARATH	Phosphatidylinositol 4-phosphate 5-kinase 8 OS=Arabidopsis thaliana GN=PIP5K8 PE=2 SV=1	AT4G17080.1	| Symbols: | Histone H3 K4-specific methyltransferase SET7/9 family protein | chr4:9601570-9603815 FORWARD LENGTH=513	LOC_Os10g41534.3	protein|ICE-like protease p20 domain containing protein, expressed	IMGA|Medtr5g058920.1	Phosphatidylinositol-4-phosphate 5-kinase chr5 23659553-23662290 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_06415	A	A2S	Potri.002G140100	Potri.002G140100(AS) Potri.014G052400(BS)	POPTR_0002s14100	sp|Q9ZRS8|RL37A_PSEMZ	60S ribosomal protein L37a OS=Pseudotsuga menziesii GN=RPL37A PE=3 SV=1	AT3G10950.1	| Symbols: | Zinc-binding ribosomal protein family protein | chr3:3423893-3424566 FORWARD LENGTH=92	LOC_Os05g48320.1	protein|60S ribosomal protein L37a, putative, expressed	NA	NA	GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005737|cytoplasm GO:0005829|cytosol GO:0005840|ribosome GO:0022625|cytosolic large ribosomal subunit
pt2_06416	A	A1S	Potri.002G140100	Potri.002G140100(AS)	POPTR_0002s14100	sp|Q9ZRS8|RL37A_PSEMZ	60S ribosomal protein L37a OS=Pseudotsuga menziesii GN=RPL37A PE=3 SV=1	AT3G10950.1	| Symbols: | Zinc-binding ribosomal protein family protein | chr3:3423893-3424566 FORWARD LENGTH=92	LOC_Os05g48320.1	protein|60S ribosomal protein L37a, putative, expressed	NA	NA	GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005737|cytoplasm GO:0005829|cytosol GO:0005840|ribosome GO:0022625|cytosolic large ribosomal subunit
pt2_06417	A	A1S	Potri.002G140100	Potri.002G140100(AS)	POPTR_0002s14100	sp|Q9ZRS8|RL37A_PSEMZ	60S ribosomal protein L37a OS=Pseudotsuga menziesii GN=RPL37A PE=3 SV=1	AT3G10950.1	| Symbols: | Zinc-binding ribosomal protein family protein | chr3:3423893-3424566 FORWARD LENGTH=92	LOC_Os05g48320.1	protein|60S ribosomal protein L37a, putative, expressed	NA	NA	GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005737|cytoplasm GO:0005829|cytosol GO:0005840|ribosome GO:0022625|cytosolic large ribosomal subunit
pt2_06418	A	A1S	Potri.002G140200	Potri.002G140200(AS)	POPTR_0002s14110	sp|Q76E23|IF4G1_ARATH	Eukaryotic translation initiation factor 4G OS=Arabidopsis thaliana GN=EIF4G PE=1 SV=2	AT3G60240.3	| Symbols: EIF4G, CUM2 | eukaryotic translation initiation factor 4G | chr3:22261842-22268295 FORWARD LENGTH=1725	LOC_Os07g36940.2	protein|eukaryotic translation initiation factor 4G, putative, expressed	IMGA|contig_68948_1.1	Eukaryotic translation initiation factor 4 gamma contig_68948 56-7195 E PREDN 20111014	GO:0000226|microtubule cytoskeleton organization GO:0009615|response to virus GO:0009630|gravitropism GO:0009737|response to abscisic acid stimulus GO:0016070|RNA metabolic process	GO:0003743|translation initiation factor activity	GO:0005576|extracellular region GO:0005737|cytoplasm
pt2_06419	A	A1S	Potri.002G140300	Potri.002G140300(AS)	POPTR_0002s14120	NA	NA	AT2G44670.1	| Symbols: | Protein of unknown function (DUF581) | chr2:18425279-18425673 FORWARD LENGTH=93	LOC_Os04g49620.1	protein|DUF581 domain containing protein, expressed	IMGA|Medtr5g013770.1	hypothetical protein chr5 4179788-4180781 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_06420	G	G5	NA	NA	POPTR_0002s14125	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06421	A	A2S	Potri.002G140400	Potri.002G140400(AS) Potri.014G053300(DS)	POPTR_0002s14130	sp|Q9M5M1|RS11_EUPES	40S ribosomal protein S11 OS=Euphorbia esula GN=RPS11 PE=2 SV=1	AT5G23740.1	| Symbols: RPS11-BETA | ribosomal protein S11-beta | chr5:8008251-8009330 REVERSE LENGTH=159	LOC_Os08g10608.1	protein|ribosomal protein S17, putative, expressed	NA	NA	GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005737|cytoplasm GO:0005840|ribosome GO:0016020|membrane GO:0022627|cytosolic small ribosomal subunit
pt2_06422	A	A1S	Potri.002G140500	Potri.002G140500(AS)	POPTR_0002s14140	sp|Q9NVW2|RNF12_HUMAN	E3 ubiquitin-protein ligase RLIM OS=Homo sapiens GN=RLIM PE=1 SV=3	AT5G45290.1	| Symbols: | RING/U-box superfamily protein | chr5:18350011-18352092 REVERSE LENGTH=545	LOC_Os02g55520.2	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr5g026260.1	RING finger protein chr5 10530462-10526071 E EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_06423	A	A1S	Potri.002G140600	Potri.002G140600(AS)	POPTR_0002s14150	sp|Q9LY41|ATL4_ARATH	E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana GN=ATL4 PE=1 SV=1	AT3G60220.1	| Symbols: ATL4, TL4 | TOXICOS EN LEVADURA 4 | chr3:22254790-22255794 REVERSE LENGTH=334	LOC_Os02g46340.1	protein|RING-H2 finger protein ATL3J, putative, expressed	IMGA|Medtr5g066250.1	RING zinc finger protein-like protein chr5 26959991-26958690 H EGN_Mt100125 20111014	GO:0016567|protein ubiquitination	GO:0004842|ubiquitin-protein ligase activity GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_06424	A	A1S	Potri.002G140700	Potri.002G140700(AS)	POPTR_0002s14160	NA	NA	AT4G00026.1	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim21 (InterPro:IPR013261); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr4:11634-13285 REVERSE LENGTH=269	LOC_Os03g14890.2	protein|AGAP008572-PA, putative, expressed	NA	NA	GO:0090351|seedling development	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_06425	A	A1S	Potri.002G140800	Potri.002G140800(AS)	POPTR_0002s14170	NA	NA	AT4G13970.1	| Symbols: | zinc ion binding | chr4:8070696-8074134 REVERSE LENGTH=778	LOC_Os07g12520.1	protein|zinc ion binding protein, putative, expressed	IMGA|Medtr5g037070.1	hypothetical protein chr5 15755237-15751519 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0008270|zinc ion binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06426	A	A1S	Potri.002G140900	Potri.002G140900(AS)	POPTR_0002s14180	sp|A2WW87|GAM1_ORYSI	Transcription factor GAMYB OS=Oryza sativa subsp. indica GN=GAM1 PE=2 SV=1	AT3G60460.1	| Symbols: DUO1 | myb-like HTH transcriptional regulator family protein | chr3:22342429-22343491 REVERSE LENGTH=297	LOC_Os04g46384.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr1g021230.1	MYB family transcription factor-like protein chr1 6441630-6444638 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0048235|pollen sperm cell differentiation	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_06427	A	A1S	Potri.002G141000	Potri.002G141000(AS)	POPTR_0002s14190	NA	NA	AT3G60450.1	| Symbols: | Phosphoglycerate mutase family protein | chr3:22340982-22342187 FORWARD LENGTH=274	LOC_Os03g01180.1	protein|phosphoglycerate mutase, putative, expressed	IMGA|Medtr5g021570.2	Serine carboxypeptidase-like protein chr5 8087722-8092412 F EGN_Mt100125 20111014	GO:0008150|biological_process GO:0009627|systemic acquired resistance GO:0034976|response to endoplasmic reticulum stress	NA	GO:0005634|nucleus GO:0005829|cytosol
pt2_06428	A	A1S	Potri.002G141100	Potri.002G141100(AS)	POPTR_0002s14200	sp|Q04960|DNJH_CUCSA	DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 PE=2 SV=1	AT3G44110.1	| Symbols: ATJ3, ATJ | DNAJ homologue 3 | chr3:15869115-15871059 REVERSE LENGTH=420	LOC_Os02g43930.3	protein|chaperone protein dnaJ, putative, expressed	IMGA|Medtr5g037880.1	DnaJ homolog subfamily B member chr5 16131554-16134251 F EGN_Mt100125 20111014	GO:0006457|protein folding GO:0006499|N-terminal protein myristoylation GO:0009408|response to heat GO:0009644|response to high light intensity GO:0042542|response to hydrogen peroxide	GO:0005524|ATP binding GO:0031072|heat shock protein binding GO:0051082|unfolded protein binding	GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_06429	A	A1S	Potri.002G141200	Potri.002G141200(AS)	POPTR_0002s14210	sp|Q8LBQ7|ERF34_ARATH	Ethylene-responsive transcription factor ERF034 OS=Arabidopsis thaliana GN=ERF034 PE=2 SV=2	AT2G44940.1	| Symbols: | Integrase-type DNA-binding superfamily protein | chr2:18537294-18538181 FORWARD LENGTH=295	LOC_Os02g43970.1	protein|AP2 domain containing protein, expressed	IMGA|Medtr5g012910.1	Ethylene-responsive transcription factor TINY chr5 3739805-3739260 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_06430	A	A1S	Potri.002G141300	Potri.002G141300(AS)	POPTR_0002s14220	sp|Q8RXD6|BRE1A_ARATH	E3 ubiquitin-protein ligase BRE1-like 1 OS=Arabidopsis thaliana GN=HUB1 PE=1 SV=1	AT2G44950.1	| Symbols: RDO4, HUB1 | histone mono-ubiquitination 1 | chr2:18542602-18548247 REVERSE LENGTH=878	LOC_Os04g46450.1	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr5g084990.1	E3 ubiquitin-protein ligase BRE1-like protein chr5 35650986-35646385 F EGN_Mt100125 20111014	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0003002|regionalization GO:0006396|RNA processing GO:0006406|mRNA export from nucleus GO:0006513|protein monoubiquitination GO:0007062|sister chromatid cohesion GO:0007155|cell adhesion GO:0007346|regulation of mitotic cell cycle GO:0009640|photomorphogenesis GO:0009793|embryo development ending in seed dormancy GO:0009817|defense response to fungus, incompatible interaction GO:0009845|seed germination GO:0009880|embryonic pattern specification GO:0009909|regulation of flower development GO:0009933|meristem structural organization GO:0009965|leaf morphogenesis GO:0010014|meristem initiation GO:0010072|primary shoot apical meristem specification GO:0010074|maintenance of meristem identity GO:0010090|trichome morphogenesis GO:0010162|seed dormancy process GO:0010182|sugar mediated signaling pathway GO:0010228|vegetative to reproductive phase transition of meristem GO:0010388|cullin deneddylation GO:0010389|regulation of G2/M transition of mitotic cell cycle GO:0010390|histone monoubiquitination GO:0010413|glucuronoxylan metabolic process GO:0010431|seed maturation GO:0010564|regulation of cell cycle process GO:0016049|cell growth GO:0016567|protein ubiquitination GO:0016571|histone methylation GO:0016579|protein deubiquitination GO:0016926|protein desumoylation GO:0019915|lipid storage GO:0033043|regulation of organelle organization GO:0033523|histone H2B ubiquitination GO:0045010|actin nucleation GO:0045492|xylan biosynthetic process GO:0045595|regulation of cell differentiation GO:0045893|positive regulation of transcription, DNA-dependent GO:0048366|leaf development GO:0048449|floral organ formation GO:0048589|developmental growth GO:0048825|cotyledon development GO:0050665|hydrogen peroxide biosynthetic process GO:0050826|response to freezing	GO:0004842|ubiquitin-protein ligase activity GO:0005515|protein binding GO:0008270|zinc ion binding GO:0042803|protein homodimerization activity	GO:0005634|nucleus GO:0005739|mitochondrion
pt2_06431	A	A2S	Potri.002G141400	Potri.002G141400(AS) Potri.014G056300(DS)	POPTR_0002s14240	sp|Q43163|CHSB_SOLTU	Chalcone synthase 1B OS=Solanum tuberosum GN=CHS1B PE=2 SV=1	AT1G02050.1	| Symbols: LAP6 | Chalcone and stilbene synthase family protein | chr1:359164-360441 REVERSE LENGTH=395	LOC_Os10g34360.1	protein|stilbene synthase, putative, expressed	IMGA|Medtr5g007760.1	Chalcone synthase chr5 1267204-1268814 E EGN_Mt100125 20111014	GO:0009699|phenylpropanoid biosynthetic process GO:0010584|pollen exine formation GO:0030639|polyketide biosynthetic process GO:0080110|sporopollenin biosynthetic process	GO:0090439|tetraketide alpha-pyrone synthase activity	GO:0005737|cytoplasm GO:0005783|endoplasmic reticulum
pt2_06432	A	A1S	Potri.002G141500	Potri.002G141500(AS)	POPTR_0002s14250	sp|O82528|RL15_PETHY	60S ribosomal protein L15 OS=Petunia hybrida GN=RPL15 PE=2 SV=1	AT4G16720.1	| Symbols: | Ribosomal protein L23/L15e family protein | chr4:9400156-9401315 REVERSE LENGTH=204	LOC_Os05g19370.1	protein|60S ribosomal protein L15, putative, expressed	NA	NA	GO:0001510|RNA methylation GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005737|cytoplasm GO:0005774|vacuolar membrane GO:0005829|cytosol GO:0005840|ribosome GO:0005886|plasma membrane GO:0022625|cytosolic large ribosomal subunit GO:0022626|cytosolic ribosome
pt2_06433	A	A1S	Potri.002G141600	Potri.002G141600(AS)	POPTR_0002s14260	sp|B6SGC5|CNR6_MAIZE	Cell number regulator 6 OS=Zea mays GN=CNR6 PE=2 SV=1	AT2G45010.1	| Symbols: | PLAC8 family protein | chr2:18568045-18569615 FORWARD LENGTH=244	LOC_Os03g01210.2	protein|uncharacterized Cys-rich domain containing protein, putative, expressed	IMGA|Medtr5g065810.1	hypothetical protein chr5 26714435-26712911 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005886|plasma membrane
pt2_06434	A	A1S	Potri.002G141700	Potri.002G141700(AS)	POPTR_0002s14270	sp|Q08062|MDHC_MAIZE	Malate dehydrogenase, cytoplasmic OS=Zea mays PE=2 SV=2	AT1G04410.1	| Symbols: | Lactate/malate dehydrogenase family protein | chr1:1189418-1191267 REVERSE LENGTH=332	LOC_Os10g33800.1	protein|lactate/malate dehydrogenase, putative, expressed	IMGA|Medtr1g043040.1	Malate dehydrogenase chr1 12398443-12393400 F EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0006094|gluconeogenesis GO:0006096|glycolysis GO:0006108|malate metabolic process GO:0006833|water transport GO:0006972|hyperosmotic response GO:0007030|Golgi organization GO:0009266|response to temperature stimulus GO:0009651|response to salt stress GO:0010043|response to zinc ion GO:0044262|cellular carbohydrate metabolic process GO:0046686|response to cadmium ion GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0016491|oxidoreductase activity GO:0016615|malate dehydrogenase activity GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0030060|L-malate dehydrogenase activity	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0016020|membrane GO:0048046|apoplast
pt2_06435	A	A1S	Potri.002G141800	Potri.002G141800(AS)	POPTR_0002s14280	sp|O48905|MDHC_MEDSA	Malate dehydrogenase, cytoplasmic OS=Medicago sativa GN=CMDH PE=2 SV=1	AT5G43330.1	| Symbols: | Lactate/malate dehydrogenase family protein | chr5:17390552-17392449 FORWARD LENGTH=332	NA	NA	IMGA|Medtr1g043040.1	Malate dehydrogenase chr1 12398443-12393400 F EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0006108|malate metabolic process GO:0044262|cellular carbohydrate metabolic process GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0016491|oxidoreductase activity GO:0016615|malate dehydrogenase activity GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0030060|L-malate dehydrogenase activity	GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0048046|apoplast
pt2_06436	A	A1S	Potri.002G141900	Potri.002G141900(AS)	POPTR_0002s14290	sp|Q7XDC8|MDHC_ORYSJ	Malate dehydrogenase, cytoplasmic OS=Oryza sativa subsp. japonica GN=Os10g0478200 PE=1 SV=3	AT1G04410.1	| Symbols: | Lactate/malate dehydrogenase family protein | chr1:1189418-1191267 REVERSE LENGTH=332	LOC_Os10g33800.1	protein|lactate/malate dehydrogenase, putative, expressed	IMGA|Medtr1g043040.1	Malate dehydrogenase chr1 12398443-12393400 F EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0006094|gluconeogenesis GO:0006096|glycolysis GO:0006108|malate metabolic process GO:0006833|water transport GO:0006972|hyperosmotic response GO:0007030|Golgi organization GO:0009266|response to temperature stimulus GO:0009651|response to salt stress GO:0010043|response to zinc ion GO:0044262|cellular carbohydrate metabolic process GO:0046686|response to cadmium ion GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0016491|oxidoreductase activity GO:0016615|malate dehydrogenase activity GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0030060|L-malate dehydrogenase activity	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0016020|membrane GO:0048046|apoplast
pt2_06437	A	A2S	Potri.002G142000	Potri.002G142000(AS) Potri.002G142100(BS)	POPTR_0002s14300	NA	NA	AT3G15351.1	| Symbols: | unknown protein; Has 50 Blast hits to 50 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:5176726-5177531 FORWARD LENGTH=165	LOC_Os07g30220.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06438	A	A1S	Potri.002G142200	Potri.002G142200(AS)	POPTR_0002s14320	sp|Q8GXL3|SPL8_ARATH	Squamosa promoter-binding-like protein 8 OS=Arabidopsis thaliana GN=SPL8 PE=1 SV=2	AT1G02065.1	| Symbols: SPL8 | squamosa promoter binding protein-like 8 | chr1:365625-367149 FORWARD LENGTH=333	LOC_Os06g44860.1	protein|OsSPL10 - SBP-box gene family member, expressed	IMGA|Medtr5g046670.1	Squamosa promoter binding protein chr5 20048386-20043614 E EGN_Mt100125 20111014	GO:0009554|megasporogenesis GO:0009556|microsporogenesis GO:0048653|anther development	GO:0003677|DNA binding	GO:0005634|nucleus
pt2_06439	B	B1S	Potri.002G142400	Potri.002G142400(BS)	POPTR_0002s14330	sp|Q7XT42|SPL7_ORYSJ	Squamosa promoter-binding-like protein 7 OS=Oryza sativa subsp. japonica GN=SPL7 PE=2 SV=2	AT1G27360.4	| Symbols: SPL11 | squamosa promoter-like 11 | chr1:9502139-9503715 FORWARD LENGTH=393	LOC_Os04g46580.1	protein|OsSPL7 - SBP-box gene family member, expressed	IMGA|Medtr5g046670.1	Squamosa promoter binding protein chr5 20048386-20043614 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0048510|regulation of timing of transition from vegetative to reproductive phase	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_06440	R	R	NA	NA	POPTR_0002s14340	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06441	A	A1S	Potri.002G142600	Potri.002G142600(AS)	POPTR_0002s14350	NA	NA	AT3G60520.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02070.1); Has 107 Blast hits to 107 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:22361751-22362467 REVERSE LENGTH=129	LOC_Os04g46600.1	protein|zinc finger protein, putative, expressed	IMGA|Medtr5g065350.1	hypothetical protein chr5 26495475-26496812 F EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005575|cellular_component
pt2_06442	A	A1S	Potri.002G142700	Potri.002G142700(AS)	POPTR_0002s14360	sp|P28769|TCPA_ARATH	T-complex protein 1 subunit alpha OS=Arabidopsis thaliana GN=CCT1 PE=2 SV=1	AT3G20050.1	| Symbols: ATTCP-1, TCP-1 | T-complex protein 1 alpha subunit | chr3:6998544-7002266 REVERSE LENGTH=545	LOC_Os04g46620.1	protein|T-complex protein, putative, expressed	IMGA|Medtr5g087560.1	T-complex protein 1 subunit eta chr5 36942040-36950933 F EGN_Mt100125 20111014	GO:0001510|RNA methylation GO:0006094|gluconeogenesis GO:0006457|protein folding GO:0007010|cytoskeleton organization GO:0009220|pyrimidine ribonucleotide biosynthetic process GO:0009640|photomorphogenesis GO:0009909|regulation of flower development GO:0010388|cullin deneddylation GO:0010498|proteasomal protein catabolic process GO:0034968|histone lysine methylation GO:0044267|cellular protein metabolic process	GO:0005524|ATP binding GO:0051082|unfolded protein binding	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_06443	A	A1S	Potri.002G142700	Potri.002G142700(AS)	POPTR_0002s14370	sp|P28769|TCPA_ARATH	T-complex protein 1 subunit alpha OS=Arabidopsis thaliana GN=CCT1 PE=2 SV=1	AT3G20050.1	| Symbols: ATTCP-1, TCP-1 | T-complex protein 1 alpha subunit | chr3:6998544-7002266 REVERSE LENGTH=545	LOC_Os04g46620.1	protein|T-complex protein, putative, expressed	IMGA|Medtr5g087560.1	T-complex protein 1 subunit eta chr5 36942040-36950933 F EGN_Mt100125 20111014	GO:0001510|RNA methylation GO:0006094|gluconeogenesis GO:0006457|protein folding GO:0007010|cytoskeleton organization GO:0009220|pyrimidine ribonucleotide biosynthetic process GO:0009640|photomorphogenesis GO:0009909|regulation of flower development GO:0010388|cullin deneddylation GO:0010498|proteasomal protein catabolic process GO:0034968|histone lysine methylation GO:0044267|cellular protein metabolic process	GO:0005524|ATP binding GO:0051082|unfolded protein binding	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_06444	A	A1S	Potri.002G142800	Potri.002G142800(AS)	POPTR_0002s14380	sp|O49743|GATA4_ARATH	GATA transcription factor 4 OS=Arabidopsis thaliana GN=GATA4 PE=2 SV=1	AT3G60530.1	| Symbols: GATA4 | GATA transcription factor 4 | chr3:22373348-22374147 FORWARD LENGTH=240	LOC_Os10g40810.1	protein|GATA zinc finger domain containing protein, expressed	IMGA|Medtr5g007600.1	GATA transcription factor chr5 1186271-1187716 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009416|response to light stimulus GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_06445	A	A1S	Potri.002G142900	Potri.002G142900(AS)	POPTR_0002s14390	NA	NA	AT2G45060.1	| Symbols: | Uncharacterised conserved protein UCP022280 | chr2:18584674-18586688 REVERSE LENGTH=272	LOC_Os02g01450.1	protein|expressed protein	NA	NA	GO:0006007|glucose catabolic process GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005739|mitochondrion
pt2_06446	A	A1S	Potri.002G143000	Potri.002G143000(AS)	POPTR_0002s14400	sp|A0JP85|CNOT1_XENTR	CCR4-NOT transcription complex subunit 1 OS=Xenopus tropicalis GN=cnot1 PE=2 SV=1	AT1G02080.2	| Symbols: | transcription regulators | chr1:373694-386682 FORWARD LENGTH=2377	LOC_Os10g40780.1	protein|CCR4-Not complex component, Not1domain containing protein, expressed	NA	NA	GO:0000226|microtubule cytoskeleton organization GO:0007155|cell adhesion GO:0010090|trichome morphogenesis GO:0045010|actin nucleation	NA	GO:0005829|cytosol GO:0016020|membrane
pt2_06447	A	A1S	Potri.002G143100	Potri.002G143100(AS)	POPTR_0002s14410	sp|P38389|SC61B_ARATH	Protein transport protein Sec61 subunit beta OS=Arabidopsis thaliana GN=At2g45070 PE=2 SV=1	AT3G60540.2	| Symbols: | Preprotein translocase Sec, Sec61-beta subunit protein | chr3:22375132-22375377 REVERSE LENGTH=81	LOC_Os01g38510.1	protein|protein transport protein Sec61 subunit beta, putative, expressed	IMGA|Medtr1g082400.1	Protein transport protein Sec61 beta subunit chr1 21149236-21148892 H EGN_Mt100125 20111014	GO:0009627|systemic acquired resistance GO:0015031|protein transport GO:0034976|response to endoplasmic reticulum stress	GO:0008565|protein transporter activity	NA
pt2_06448	A	A1S	Potri.002G143200	Potri.002G143200(AS)	POPTR_0002s14420	sp|Q8VYT5|FB254_ARATH	F-box protein At5g07670 OS=Arabidopsis thaliana GN=At5g07670 PE=2 SV=1	AT5G07670.1	| Symbols: | RNI-like superfamily protein | chr5:2430421-2432065 FORWARD LENGTH=476	LOC_Os02g44104.1	protein|F-box family protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06449	A	A2S	Potri.002G143300	Potri.002G143300(AS) Potri.014G066500(BS)	POPTR_0002s14430	sp|Q8GZ38|UNE10_ARATH	Transcription factor UNE10 OS=Arabidopsis thaliana GN=UNE10 PE=2 SV=1	AT4G00050.1	| Symbols: UNE10 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr4:17863-19848 FORWARD LENGTH=399	LOC_Os10g40740.1	protein|helix-loop-helix DNA-binding domain containing protein, expressed	IMGA|Medtr5g017040.1	Transcription factor SPATULA chr5 5918843-5921342 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009567|double fertilization forming a zygote and endosperm	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_06450	C	C1S	Potri.002G143300	Potri.002G143300(CS)	sp|Q8GZ38|UNE10_ARATH	Transcription factor UNE10 OS=Arabidopsis thaliana GN=UNE10 PE=2 SV=1	AT4G00050.1	| Symbols: UNE10 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr4:17863-19848 FORWARD LENGTH=399	LOC_Os10g40740.1	protein|helix-loop-helix DNA-binding domain containing protein, expressed	IMGA|Medtr5g017040.1	Transcription factor SPATULA chr5 5918843-5921342 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009567|double fertilization forming a zygote and endosperm	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_06451	A	A1S	Potri.002G143400	Potri.002G143400(AS)	POPTR_0002s14440	sp|Q9SHD3|CCU21_ARATH	Cyclin-U2-1 OS=Arabidopsis thaliana GN=CYCU2-1 PE=1 SV=1	AT2G45080.1	| Symbols: cycp3;1 | cyclin p3;1 | chr2:18591688-18592443 FORWARD LENGTH=222	LOC_Os04g46660.1	protein|cyclin, putative, expressed	NA	NA	GO:0000079|regulation of cyclin-dependent protein kinase activity GO:0010440|stomatal lineage progression GO:0051726|regulation of cell cycle	GO:0004693|cyclin-dependent protein kinase activity GO:0019901|protein kinase binding	NA
pt2_06452	A	A1S	Potri.002G143600	Potri.002G143600(AS)	POPTR_0002s14450	sp|O65499|ZAT3_ARATH	Zinc finger protein ZAT3 OS=Arabidopsis thaliana GN=ZAT3 PE=2 SV=1	AT1G02040.1	| Symbols: | C2H2-type zinc finger family protein | chr1:358104-359078 REVERSE LENGTH=324	LOC_Os02g44120.1	protein|ZOS2-13 - C2H2 zinc finger protein, expressed	IMGA|contig_55524_1.1	Zinc-finger protein contig_55524 1775-2990 F PREDN 20111014	NA	GO:0003676|nucleic acid binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_06453	A	A1S	Potri.002G143800	Potri.002G143800(AS)	POPTR_0002s14460	sp|Q9M202|ZAT9_ARATH	Zinc finger protein ZAT9 OS=Arabidopsis thaliana GN=ZAT9 PE=2 SV=1	AT3G60580.1	| Symbols: | C2H2-like zinc finger protein | chr3:22394007-22394873 FORWARD LENGTH=288	LOC_Os10g40660.1	protein|ZOS10-07 - C2H2 zinc finger protein, expressed	IMGA|Medtr1g106730.1	Zinc finger protein chr1 31397508-31398593 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003676|nucleic acid binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_06454	A	A1S	Potri.002G143900	Potri.002G143900(AS)	POPTR_0002s14470	sp|Q5PP62|SPX3_ARATH	SPX domain-containing protein 3 OS=Arabidopsis thaliana GN=SPX3 PE=2 SV=1	AT2G45130.1	| Symbols: ATSPX3, SPX3 | SPX domain gene 3 | chr2:18606489-18607754 FORWARD LENGTH=245	LOC_Os03g29250.1	protein|SPX domain-containing protein, putative, expressed	IMGA|Medtr1g012440.1	Vacuolar transporter chaperone chr1 2914381-2911347 F EGN_Mt100125 20111014	GO:0006817|phosphate ion transport GO:0016036|cellular response to phosphate starvation GO:0019375|galactolipid biosynthetic process GO:0045892|negative regulation of transcription, DNA-dependent GO:0080040|positive regulation of cellular response to phosphate starvation	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06455	A	A2S	Potri.002G144000	Potri.002G144000(AS) Potri.014G060900(DS)	POPTR_0002s14480	sp|Q8VZ95|VAP11_ARATH	Vesicle-associated protein 1-1 OS=Arabidopsis thaliana GN=PVA11 PE=1 SV=1	AT3G60600.1	| Symbols: VAP27-1, VAP, (AT)VAP, VAP27 | vesicle associated protein | chr3:22400537-22402408 FORWARD LENGTH=256	LOC_Os08g06020.1	protein|MSP domain containing protein, expressed	IMGA|Medtr5g012420.1	Vesicle-associated membrane protein chr5 3477683-3474442 F EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0006605|protein targeting GO:0006623|protein targeting to vacuole GO:0006886|intracellular protein transport GO:0007030|Golgi organization GO:0007033|vacuole organization GO:0010359|regulation of anion channel activity GO:0016192|vesicle-mediated transport GO:0046907|intracellular transport	GO:0005198|structural molecule activity GO:0005515|protein binding	GO:0000326|protein storage vacuole GO:0005634|nucleus GO:0005783|endoplasmic reticulum GO:0005789|endoplasmic reticulum membrane GO:0005829|cytosol GO:0005886|plasma membrane GO:0016021|integral to membrane
pt2_06456	G	G1	NA	NA	POPTR_0002s14490	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06457	A	A1S	Potri.002G144200	Potri.002G144200(AS)	POPTR_0002s14500	sp|O81316|SCL6_ARATH	Scarecrow-like protein 6 OS=Arabidopsis thaliana GN=SCL6 PE=1 SV=1	AT4G00150.1	| Symbols: HAM3, ATHAM3, LOM3 | GRAS family transcription factor | chr4:57429-59105 REVERSE LENGTH=558	LOC_Os04g46860.1	protein|scarecrow, putative, expressed	IMGA|contig_52215_1.1	GAI-like protein contig_52215 101-2211 F PREDN 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0007623|circadian rhythm GO:0010492|maintenance of shoot apical meristem identity GO:0030154|cell differentiation GO:0048768|root hair cell tip growth	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_06458	A	A1S	Potri.002G144300	Potri.002G144300(AS)	POPTR_0002s14510	NA	NA	AT1G12640.1	| Symbols: | MBOAT (membrane bound O-acyl transferase) family protein | chr1:4303586-4305666 REVERSE LENGTH=462	LOC_Os02g45344.1	protein|O-acyltransferase, putative, expressed	NA	NA	GO:0006891|intra-Golgi vesicle-mediated transport GO:0006914|autophagy GO:0009610|response to symbiotic fungus GO:0010260|organ senescence GO:0016036|cellular response to phosphate starvation GO:0019375|galactolipid biosynthetic process GO:0019432|triglyceride biosynthetic process GO:0042631|cellular response to water deprivation	GO:0016746|transferase activity, transferring acyl groups GO:0071617|lysophospholipid acyltransferase activity	GO:0005576|extracellular region GO:0005783|endoplasmic reticulum GO:0005886|plasma membrane GO:0016020|membrane
pt2_06459	A	A2S	Potri.002G144400	Potri.002G144400(AS) Potri.014G060400(DS)	POPTR_0002s14520	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process GO:0048527|lateral root development	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06460	A	A1S	Potri.002G144500	Potri.002G144500(AS)	POPTR_0002s14530	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0008270|zinc ion binding	GO:0005575|cellular_component
pt2_06461	A	A1S	Potri.002G144600	Potri.002G144600(AS)	POPTR_0002s14540	sp|Q9LZZ9|ATG8G_ARATH	Autophagy-related protein 8g OS=Arabidopsis thaliana GN=ATG8G PE=2 SV=1	AT3G60640.1	| Symbols: ATG8G | Ubiquitin-like superfamily protein | chr3:22416118-22416971 FORWARD LENGTH=121	LOC_Os08g09240.2	protein|autophagy-related protein, putative, expressed	NA	NA	GO:0006914|autophagy	GO:0008017|microtubule binding	NA
pt2_06462	A	A1S	Potri.002G144700	Potri.002G144700(AS)	POPTR_0002s14550	sp|O81316|SCL6_ARATH	Scarecrow-like protein 6 OS=Arabidopsis thaliana GN=SCL6 PE=1 SV=1	AT4G00150.1	| Symbols: HAM3, ATHAM3, LOM3 | GRAS family transcription factor | chr4:57429-59105 REVERSE LENGTH=558	LOC_Os04g46860.1	protein|scarecrow, putative, expressed	IMGA|contig_52215_1.1	GAI-like protein contig_52215 101-2211 F PREDN 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0007623|circadian rhythm GO:0010492|maintenance of shoot apical meristem identity GO:0030154|cell differentiation GO:0048768|root hair cell tip growth	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_06463	A	A1S	Potri.002G144800	Potri.002G144800(AS)	POPTR_0002s14560	sp|Q84WW5|VAP13_ARATH	Vesicle-associated protein 1-3 OS=Arabidopsis thaliana GN=PVA13 PE=2 SV=1	AT4G00170.1	| Symbols: | Plant VAMP (vesicle-associated membrane protein) family protein | chr4:70732-72085 REVERSE LENGTH=239	LOC_Os08g05890.1	protein|MSP domain containing protein, expressed	IMGA|Medtr5g012420.1	Vesicle-associated membrane protein chr5 3477683-3474442 F EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0008150|biological_process	GO:0005198|structural molecule activity	GO:0005783|endoplasmic reticulum
pt2_06464	A	A1S	Potri.002G144900	Potri.002G144900(AS)	POPTR_0002s14570	NA	NA	AT3G60670.1	| Symbols: | PLATZ transcription factor family protein | chr3:22424695-22426074 REVERSE LENGTH=245	LOC_Os02g09070.1	protein|zinc-binding protein, putative, expressed	IMGA|Medtr5g007230.1	hypothetical protein chr5 1014435-1016598 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0008270|zinc ion binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06465	A	A2S	Potri.002G145000	Potri.002G145000(AS) Potri.014G066600(DS)	POPTR_0002s14580	NA	NA	AT3G60680.1	| Symbols: | Plant protein of unknown function (DUF641) | chr3:22430246-22431745 FORWARD LENGTH=499	LOC_Os10g36400.1	protein|GIL1, putative, expressed	IMGA|Medtr5g075180.1	hypothetical protein chr5 30936325-30937893 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005777|peroxisome GO:0005856|cytoskeleton
pt2_06466	G	G1	NA	NA	POPTR_0002s14590	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06467	A	A1S	Potri.002G145100	Potri.002G145100(AS)	POPTR_0002s14600	sp|O22152|YAB1_ARATH	Axial regulator YABBY 1 OS=Arabidopsis thaliana GN=YAB1 PE=1 SV=1	AT2G45190.1	| Symbols: AFO, FIL, YAB1 | Plant-specific transcription factor YABBY family protein | chr2:18628450-18630552 REVERSE LENGTH=229	LOC_Os04g45330.1	protein|YABBY domain containing protein, putative, expressed	IMGA|Medtr5g034030.1	Axial regulator YABBY chr5 14275693-14277568 H EGN_Mt100125 20111014	GO:0006333|chromatin assembly or disassembly GO:0009737|response to abscisic acid stimulus GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009909|regulation of flower development GO:0009933|meristem structural organization GO:0009944|polarity specification of adaxial/abaxial axis GO:0010027|thylakoid membrane organization GO:0010093|specification of floral organ identity GO:0010103|stomatal complex morphogenesis GO:0010154|fruit development GO:0010158|abaxial cell fate specification GO:0010159|specification of organ position GO:0010162|seed dormancy process GO:0010228|vegetative to reproductive phase transition of meristem GO:0010450|inflorescence meristem growth GO:0016226|iron-sulfur cluster assembly GO:0045165|cell fate commitment GO:0048481|ovule development	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_06468	A	A1S	Potri.002G145200	Potri.002G145200(AS)	POPTR_0002s14610	sp|O22151|GOS12_ARATH	Golgi SNAP receptor complex member 1-2 OS=Arabidopsis thaliana GN=GOS12 PE=1 SV=2	AT2G45200.1	| Symbols: GOS12, ATGOS12 | golgi snare 12 | chr2:18637689-18639640 REVERSE LENGTH=239	LOC_Os02g03450.1	protein|vesicle transport v-SNARE protein, putative, expressed	NA	NA	GO:0006888|ER to Golgi vesicle-mediated transport GO:0006891|intra-Golgi vesicle-mediated transport GO:0006944|cellular membrane fusion GO:0009737|response to abscisic acid stimulus GO:0030244|cellulose biosynthetic process GO:0048193|Golgi vesicle transport	GO:0000149|SNARE binding	GO:0005622|intracellular GO:0005768|endosome GO:0005773|vacuole GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0005829|cytosol GO:0016021|integral to membrane
pt2_06469	A	A1S	Potri.002G145300	Potri.002G145300(AS)	POPTR_0002s14620	sp|P33080|AX10A_SOYBN	Auxin-induced protein X10A OS=Glycine max PE=2 SV=1	AT3G60690.1	| Symbols: | SAUR-like auxin-responsive protein family | chr3:22435262-22435774 FORWARD LENGTH=170	LOC_Os02g42990.1	protein|OsSAUR11 - Auxin-responsive SAUR gene family member, expressed	IMGA|Medtr1g061570.1	Auxin-induced protein 6B chr1 15693168-15692791 H EGN_Mt100125 20111014	GO:0009733|response to auxin stimulus GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway	NA	GO:0005739|mitochondrion
pt2_06470	C	C1S	Potri.002G145400	Potri.002G145400(CS)	sp|Q6NKQ9|CRR15_ARATH	Cysteine-rich repeat secretory protein 15 OS=Arabidopsis thaliana GN=CRRSP15 PE=2 SV=1	AT3G60720.1	| Symbols: PDLP8 | plasmodesmata-located protein 8 | chr3:22442035-22443608 FORWARD LENGTH=279	LOC_Os02g43000.1	protein|cysteine-rich repeat secretory protein 15 precursor, putative, expressed	IMGA|Medtr5g078030.1	Cysteine-rich repeat secretory protein chr5 32327983-32330164 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005886|plasma membrane
pt2_06471	A	A1S	Potri.002G145500	Potri.002G145500(AS)	POPTR_0002s14640	sp|O04887|PME2_CITSI	Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE=2 SV=1	AT2G45220.1	| Symbols: | Plant invertase/pectin methylesterase inhibitor superfamily | chr2:18644281-18646394 REVERSE LENGTH=511	LOC_Os01g21034.1	protein|pectinesterase, putative, expressed	IMGA|Medtr1g008140.1	Pectinesterase chr1 1318675-1315083 E EGN_Mt100125 20111014	GO:0042545|cell wall modification	GO:0004857|enzyme inhibitor activity GO:0030599|pectinesterase activity	GO:0005576|extracellular region GO:0005618|cell wall GO:0009505|plant-type cell wall GO:0016020|membrane
pt2_06472	A	A1S	Potri.002G145700	Potri.002G145700(AS)	POPTR_0002s14660	sp|Q84R10|PME36_ARATH	Probable pectinesterase/pectinesterase inhibitor 36 OS=Arabidopsis thaliana GN=PME36 PE=2 SV=2	AT3G60730.1	| Symbols: | Plant invertase/pectin methylesterase inhibitor superfamily | chr3:22444955-22447226 FORWARD LENGTH=519	LOC_Os07g47830.1	protein|pectinesterase, putative, expressed	IMGA|Medtr1g083520.1	Pectinesterase chr1 21680186-21678008 H EGN_Mt100125 20111014	GO:0042545|cell wall modification	GO:0004857|enzyme inhibitor activity GO:0030599|pectinesterase activity	GO:0005576|extracellular region GO:0005618|cell wall GO:0009505|plant-type cell wall
pt2_06473	G	G1	NA	NA	POPTR_0002s14670	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06474	A	A1S	Potri.002G145800	Potri.002G145800(AS)	POPTR_0002s14680	sp|P17407|21KD_DAUCA	21 kDa protein OS=Daucus carota PE=2 SV=1	AT4G00080.1	| Symbols: UNE11 | Plant invertase/pectin methylesterase inhibitor superfamily protein | chr4:32946-33575 FORWARD LENGTH=209	LOC_Os06g49760.1	protein|invertase/pectin methylesterase inhibitor family protein, putative, expressed	IMGA|Medtr5g012000.1	Pectinesterase chr5 3301058-3301989 F EGN_Mt100125 20111014	GO:0000041|transition metal ion transport GO:0009567|double fertilization forming a zygote and endosperm GO:0009733|response to auxin stimulus GO:0009741|response to brassinosteroid stimulus	GO:0004857|enzyme inhibitor activity GO:0030599|pectinesterase activity GO:0046910|pectinesterase inhibitor activity	NA
pt2_06475	A	A1S	Potri.002G145900	Potri.002G145900(AS)	POPTR_0002s14690	NA	NA	AT2G45260.1	| Symbols: | Plant protein of unknown function (DUF641) | chr2:18664661-18665938 REVERSE LENGTH=425	LOC_Os10g23220.2	protein|GIL1, putative, expressed	IMGA|Medtr5g075180.1	hypothetical protein chr5 30936325-30937893 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005774|vacuolar membrane
pt2_06476	A	A1S	Potri.002G146000	Potri.002G146000(AS)	POPTR_0002s14700	sp|O80813|YC20L_ARATH	Ycf20-like protein OS=Arabidopsis thaliana GN=At1g65420 PE=2 SV=2	AT3G56830.1	| Symbols: | Protein of unknown function (DUF565) | chr3:21042755-21043840 REVERSE LENGTH=230	LOC_Os03g63554.1	protein|DUF565 domain containing protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_06477	A	A1S	Potri.002G146100	Potri.002G146100(AS)	POPTR_0002s14710	NA	NA	AT1G02020.1	| Symbols: | nitroreductase family protein | chr1:352842-354845 REVERSE LENGTH=642	LOC_Os10g11340.1	protein|nitroreductase family protein, putative, expressed	NA	NA	GO:0008152|metabolic process	GO:0016491|oxidoreductase activity GO:0016657|oxidoreductase activity, acting on NADH or NADPH, nitrogenous group as acceptor	GO:0005634|nucleus GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_06478	A	A2S	Potri.002G146200	Potri.002G146200(AS) Potri.014G067700(BS)	POPTR_0002s14720	sp|P46637|ARGI1_ARATH	Arginase OS=Arabidopsis thaliana GN=At4g08900 PE=2 SV=1	AT4G08900.1	| Symbols: | arginase | chr4:5703499-5705180 FORWARD LENGTH=342	LOC_Os04g01590.1	protein|arginase, putative, expressed	NA	NA	GO:0006527|arginine catabolic process GO:0006595|polyamine metabolic process GO:0042742|defense response to bacterium	GO:0004053|arginase activity GO:0008783|agmatinase activity GO:0016813|hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines GO:0046872|metal ion binding GO:0050897|cobalt ion binding	GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_06479	A	A1S	Potri.002G146300	Potri.002G146300(AS)	POPTR_0002s14730	sp|Q43848|TKTC_SOLTU	Transketolase, chloroplastic OS=Solanum tuberosum PE=2 SV=1	AT2G45290.1	| Symbols: | Transketolase | chr2:18672737-18675589 FORWARD LENGTH=741	LOC_Os06g04270.1	protein|transketolase, chloroplast precursor, putative, expressed	IMGA|Medtr5g059410.1	Transketolase chr5 23894869-23890929 E EGN_Mt100125 20111014	GO:0008152|metabolic process GO:0046686|response to cadmium ion	GO:0003824|catalytic activity GO:0004802|transketolase activity	GO:0009507|chloroplast GO:0009536|plastid GO:0009570|chloroplast stroma
pt2_06480	A	A1S	Potri.002G146400	Potri.002G146400(AS)	POPTR_0002s14740	sp|P11043|AROA_PETHY	3-phosphoshikimate 1-carboxyvinyltransferase, chloroplastic OS=Petunia hybrida PE=1 SV=1	AT2G45300.1	| Symbols: | RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta | chr2:18677518-18679868 FORWARD LENGTH=520	LOC_Os06g04280.1	protein|3-phosphoshikimate 1-carboxyvinyltransferase, chloroplast precursor, putative, expressed	NA	NA	GO:0009073|aromatic amino acid family biosynthetic process GO:0009423|chorismate biosynthetic process GO:0018920|glyphosate metabolic process	GO:0003824|catalytic activity GO:0003866|3-phosphoshikimate 1-carboxyvinyltransferase activity GO:0016765|transferase activity, transferring alkyl or aryl (other than methyl) groups	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_06481	A	A1S	Potri.002G146500	Potri.002G146500(AS)	POPTR_0002s14750	sp|Q9LPC1|GAE2_ARATH	UDP-glucuronate 4-epimerase 2 OS=Arabidopsis thaliana GN=GAE2 PE=2 SV=1	AT1G02000.1	| Symbols: GAE2 | UDP-D-glucuronate 4-epimerase 2 | chr1:346052-347356 FORWARD LENGTH=434	LOC_Os02g54890.1	protein|UDP-glucuronate 4-epimerase, putative, expressed	IMGA|Medtr5g011940.1	UDP-glucuronate 4-epimerase chr5 3278323-3276221 H EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0009225|nucleotide-sugar metabolic process GO:0044237|cellular metabolic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0016857|racemase and epimerase activity, acting on carbohydrates and derivatives GO:0050378|UDP-glucuronate 4-epimerase activity GO:0050662|coenzyme binding	GO:0005794|Golgi apparatus GO:0016020|membrane
pt2_06482	A	A1S	Potri.002G146600	Potri.002G146600(AS)	POPTR_0002s14760	sp|Q9STY6|RS202_ARATH	40S ribosomal protein S20-2 OS=Arabidopsis thaliana GN=RPS20B PE=2 SV=1	AT3G47370.3	| Symbols: | Ribosomal protein S10p/S20e family protein | chr3:17453671-17454437 REVERSE LENGTH=122	LOC_Os03g14530.1	protein|S10/S20 domain containing ribosomal protein, putative, expressed	NA	NA	GO:0001510|RNA methylation GO:0006412|translation	GO:0003723|RNA binding GO:0003735|structural constituent of ribosome	GO:0005618|cell wall GO:0005622|intracellular GO:0005730|nucleolus GO:0005829|cytosol GO:0005840|ribosome GO:0009506|plasmodesma GO:0009507|chloroplast GO:0015935|small ribosomal subunit GO:0016020|membrane GO:0022626|cytosolic ribosome GO:0022627|cytosolic small ribosomal subunit
pt2_06483	A	A1S	Potri.002G146700	Potri.002G146700(AS)	POPTR_0002s14770	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06484	A	A1S	Potri.002G146800	Potri.002G146800(AS)	POPTR_0002s14780	sp|P62302|RS13_SOYBN	40S ribosomal protein S13 OS=Glycine max GN=RPS13 PE=2 SV=1	AT3G60770.1	| Symbols: | Ribosomal protein S13/S15 | chr3:22460525-22461656 REVERSE LENGTH=151	LOC_Os08g02410.1	protein|40S ribosomal protein S13, putative, expressed	IMGA|Medtr5g011910.1	40S ribosomal protein S13 chr5 3260766-3263539 F EGN_Mt100125 20111014	GO:0001510|RNA methylation GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005618|cell wall GO:0005622|intracellular GO:0005730|nucleolus GO:0005829|cytosol GO:0005840|ribosome GO:0009507|chloroplast GO:0022626|cytosolic ribosome GO:0022627|cytosolic small ribosomal subunit
pt2_06485	A	A1S	Potri.002G146900	Potri.002G146900(AS)	POPTR_0002s14790	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06486	A	A1S	Potri.002G147000	Potri.002G147000(AS)	POPTR_0002s14800	sp|Q8RY65|NIK2_ARATH	Protein NSP-INTERACTING KINASE 2 OS=Arabidopsis thaliana GN=NIK2 PE=1 SV=1	AT2G45340.1	| Symbols: | Leucine-rich repeat protein kinase family protein | chr2:18691739-18694466 FORWARD LENGTH=691	LOC_Os06g04370.1	protein|expressed protein	IMGA|Medtr5g011840.1	Receptor-like protein kinase chr5 3227916-3224655 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway GO:0010075|regulation of meristem growth	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_06487	A	A1S	Potri.002G147100	Potri.002G147100(AS)	POPTR_0002s14810	NA	NA	AT3G60780.1	| Symbols: | Protein of unknown function (DUF1442) | chr3:22462695-22463630 FORWARD LENGTH=218	LOC_Os02g25780.1	protein|expressed protein	IMGA|Medtr5g011800.1	hypothetical protein chr5 3209629-3208620 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_06488	A	A1S	Potri.002G147200	Potri.002G147200(AS)	POPTR_0002s14820	NA	NA	AT5G62280.1	| Symbols: | Protein of unknown function (DUF1442) | chr5:25017165-25017985 FORWARD LENGTH=236	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_06489	A	A1S	Potri.002G147300	Potri.002G147300(AS)	POPTR_0002s14830	sp|Q8VYP5|ZDH14_ARATH	Probable S-acyltransferase At3g60800 OS=Arabidopsis thaliana GN=At3g60800 PE=2 SV=1	AT3G60800.1	| Symbols: | DHHC-type zinc finger family protein | chr3:22467486-22469273 REVERSE LENGTH=307	LOC_Os03g58960.1	protein|DHHC zinc finger domain containing protein, expressed	IMGA|Medtr1g098390.1	Palmitoyltransferase SWF1 chr1 28233746-28237541 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0008270|zinc ion binding	GO:0005794|Golgi apparatus
pt2_06490	A	A2S	Potri.002G147400	Potri.002G147400(AS) Potri.002G147700(BS)	POPTR_0002s14840	sp|P51106|DFRA_HORVU	Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=ANT18 PE=3 SV=1	AT2G45400.1	| Symbols: BEN1 | NAD(P)-binding Rossmann-fold superfamily protein | chr2:18703960-18706235 REVERSE LENGTH=364	LOC_Os01g44260.1	protein|dihydroflavonol-4-reductase, putative, expressed	IMGA|Medtr5g056600.1	Dihydroflavonol-4-reductase chr5 22769137-22766374 F EGN_Mt100125 20111014	GO:0009813|flavonoid biosynthetic process GO:0010422|regulation of brassinosteroid biosynthetic process GO:0016126|sterol biosynthetic process GO:0016131|brassinosteroid metabolic process GO:0016132|brassinosteroid biosynthetic process GO:0044237|cellular metabolic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0016614|oxidoreductase activity, acting on CH-OH group of donors GO:0050662|coenzyme binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_06491	A	A2S	Potri.002G147800	Potri.002G147800(AS) Potri.002G147500(AS)	POPTR_0002s14850	sp|Q9XES5|DFRA_MALDO	Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Malus domestica GN=DFR PE=1 SV=1	AT2G45400.1	| Symbols: BEN1 | NAD(P)-binding Rossmann-fold superfamily protein | chr2:18703960-18706235 REVERSE LENGTH=364	LOC_Os01g44260.1	protein|dihydroflavonol-4-reductase, putative, expressed	IMGA|Medtr5g056600.1	Dihydroflavonol-4-reductase chr5 22769137-22766374 F EGN_Mt100125 20111014	GO:0009813|flavonoid biosynthetic process GO:0010422|regulation of brassinosteroid biosynthetic process GO:0016126|sterol biosynthetic process GO:0016131|brassinosteroid metabolic process GO:0016132|brassinosteroid biosynthetic process GO:0044237|cellular metabolic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0016614|oxidoreductase activity, acting on CH-OH group of donors GO:0050662|coenzyme binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_06492	A	A2S	Potri.002G147600	Potri.002G147600(AS) Potri.T175000(BS)	POPTR_0002s14860	sp|Q84KP0|DFRA_PYRCO	Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Pyrus communis GN=DFR PE=1 SV=1	AT2G45400.1	| Symbols: BEN1 | NAD(P)-binding Rossmann-fold superfamily protein | chr2:18703960-18706235 REVERSE LENGTH=364	LOC_Os08g40440.1	protein|dihydroflavonol-4-reductase, putative, expressed	IMGA|Medtr5g056600.1	Dihydroflavonol-4-reductase chr5 22769137-22766374 F EGN_Mt100125 20111014	GO:0009813|flavonoid biosynthetic process GO:0010422|regulation of brassinosteroid biosynthetic process GO:0016126|sterol biosynthetic process GO:0016131|brassinosteroid metabolic process GO:0016132|brassinosteroid biosynthetic process GO:0044237|cellular metabolic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0016614|oxidoreductase activity, acting on CH-OH group of donors GO:0050662|coenzyme binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_06493	A	A4S	Potri.002G147900	Potri.002G147900(AS) Potri.002G147600(AS) Potri.T168700(AS) Potri.T175000(AS)	POPTR_0002s14860	sp|P51103|DFRA_CALCH	Dihydroflavonol-4-reductase OS=Callistephus chinensis GN=F PE=2 SV=1	AT2G45400.1	| Symbols: BEN1 | NAD(P)-binding Rossmann-fold superfamily protein | chr2:18703960-18706235 REVERSE LENGTH=364	LOC_Os08g40440.1	protein|dihydroflavonol-4-reductase, putative, expressed	IMGA|Medtr5g056600.1	Dihydroflavonol-4-reductase chr5 22769137-22766374 F EGN_Mt100125 20111014	GO:0009813|flavonoid biosynthetic process GO:0010422|regulation of brassinosteroid biosynthetic process GO:0016126|sterol biosynthetic process GO:0016131|brassinosteroid metabolic process GO:0016132|brassinosteroid biosynthetic process GO:0044237|cellular metabolic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0016614|oxidoreductase activity, acting on CH-OH group of donors GO:0050662|coenzyme binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_06494	A	A3S	Potri.T168600	Potri.T168600(AS) Potri.T168400(DS) Potri.002G148000(DS)	POPTR_0002s14870	sp|P51110|DFRA_VITVI	Dihydroflavonol-4-reductase OS=Vitis vinifera GN=DFR PE=1 SV=1	AT5G42800.1	| Symbols: DFR, TT3, M318 | dihydroflavonol 4-reductase | chr5:17164296-17165864 REVERSE LENGTH=382	NA	NA	NA	NA	GO:0009718|anthocyanin-containing compound biosynthetic process GO:0009744|response to sucrose stimulus GO:0010224|response to UV-B GO:0044237|cellular metabolic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0045552|dihydrokaempferol 4-reductase activity GO:0050662|coenzyme binding	GO:0042406|extrinsic to endoplasmic reticulum membrane
pt2_06495	A	A1S	Potri.T168500	Potri.T168500(AS)	POPTR_0002s14880	sp|P51102|DFRA_ARATH	Dihydroflavonol-4-reductase OS=Arabidopsis thaliana GN=DFRA PE=2 SV=2	AT2G45400.1	| Symbols: BEN1 | NAD(P)-binding Rossmann-fold superfamily protein | chr2:18703960-18706235 REVERSE LENGTH=364	LOC_Os08g40440.1	protein|dihydroflavonol-4-reductase, putative, expressed	IMGA|Medtr5g056600.1	Dihydroflavonol-4-reductase chr5 22769137-22766374 F EGN_Mt100125 20111014	GO:0009813|flavonoid biosynthetic process GO:0010422|regulation of brassinosteroid biosynthetic process GO:0016126|sterol biosynthetic process GO:0016131|brassinosteroid metabolic process GO:0016132|brassinosteroid biosynthetic process GO:0044237|cellular metabolic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0016614|oxidoreductase activity, acting on CH-OH group of donors GO:0050662|coenzyme binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_06496	A	A1S	Potri.002G148000	Potri.002G148000(AS)	POPTR_0002s14890	sp|P51102|DFRA_ARATH	Dihydroflavonol-4-reductase OS=Arabidopsis thaliana GN=DFRA PE=2 SV=2	AT2G45400.1	| Symbols: BEN1 | NAD(P)-binding Rossmann-fold superfamily protein | chr2:18703960-18706235 REVERSE LENGTH=364	LOC_Os08g40440.1	protein|dihydroflavonol-4-reductase, putative, expressed	IMGA|Medtr5g056600.1	Dihydroflavonol-4-reductase chr5 22769137-22766374 F EGN_Mt100125 20111014	GO:0009718|anthocyanin-containing compound biosynthetic process GO:0009744|response to sucrose stimulus GO:0009813|flavonoid biosynthetic process GO:0010224|response to UV-B GO:0010422|regulation of brassinosteroid biosynthetic process GO:0016126|sterol biosynthetic process GO:0016131|brassinosteroid metabolic process GO:0016132|brassinosteroid biosynthetic process GO:0044237|cellular metabolic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0016614|oxidoreductase activity, acting on CH-OH group of donors GO:0045552|dihydrokaempferol 4-reductase activity GO:0050662|coenzyme binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0042406|extrinsic to endoplasmic reticulum membrane
pt2_06497	A	A1S	Potri.002G148100	Potri.002G148100(AS)	POPTR_0002s14900	sp|Q9Y4P3|TBL2_HUMAN	Transducin beta-like protein 2 OS=Homo sapiens GN=TBL2 PE=1 SV=1	AT4G00090.1	| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr4:34234-36594 FORWARD LENGTH=430	LOC_Os03g64110.1	protein|WD domain, G-beta repeat domain containing protein, expressed	NA	NA	GO:0006626|protein targeting to mitochondrion GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0043248|proteasome assembly GO:0051788|response to misfolded protein	GO:0000166|nucleotide binding	GO:0005737|cytoplasm GO:0005783|endoplasmic reticulum
pt2_06498	A	A1S	Potri.002G148200	Potri.002G148200(AS)	POPTR_0002s14910	sp|Q9FQ09|KU80_ARATH	ATP-dependent DNA helicase 2 subunit KU80 OS=Arabidopsis thaliana GN=KU80 PE=1 SV=1	AT1G48050.1	| Symbols: KU80, ATKU80 | Ku80 family protein | chr1:17723498-17726859 FORWARD LENGTH=680	LOC_Os03g63920.1	protein|KAP-2, putative, expressed	NA	NA	GO:0000723|telomere maintenance GO:0006281|DNA repair GO:0006302|double-strand break repair GO:0006303|double-strand break repair via nonhomologous end joining GO:0006342|chromatin silencing GO:0009408|response to heat GO:0015074|DNA integration GO:0016572|histone phosphorylation GO:0051567|histone H3-K9 methylation	GO:0003677|DNA binding GO:0003690|double-stranded DNA binding GO:0004003|ATP-dependent DNA helicase activity GO:0005515|protein binding GO:0016817|hydrolase activity, acting on acid anhydrides	GO:0005634|nucleus
pt2_06499	A	A1S	Potri.002G148400	Potri.002G148400(AS)	POPTR_0002s14920	NA	NA	AT3G60810.1	| Symbols: | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1499 (InterPro:IPR010865); Has 444 Blast hits to 444 proteins in 143 species: Archae - 0; Bacteria - 268; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). | chr3:22470579-22471756 FORWARD LENGTH=214	LOC_Os03g64140.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_06500	A	A1S	Potri.002G148300	Potri.002G148300(AS)	POPTR_0002s14930	sp|O82531|PSB1_PETHY	Proteasome subunit beta type-1 OS=Petunia hybrida GN=PBF1 PE=2 SV=1	AT3G60820.3	| Symbols: PBF1 | N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein | chr3:22472038-22473809 REVERSE LENGTH=223	LOC_Os09g32800.1	protein|peptidase, T1 family, putative, expressed	IMGA|Medtr5g079740.1	Proteasome subunit beta type chr5 33091481-33088556 F EGN_Mt100125 20111014	GO:0006094|gluconeogenesis GO:0006096|glycolysis GO:0006511|ubiquitin-dependent protein catabolic process GO:0006635|fatty acid beta-oxidation GO:0009407|toxin catabolic process GO:0009651|response to salt stress GO:0009817|defense response to fungus, incompatible interaction GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0043248|proteasome assembly GO:0046686|response to cadmium ion GO:0051603|proteolysis involved in cellular protein catabolic process GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	GO:0004175|endopeptidase activity GO:0004298|threonine-type endopeptidase activity GO:0008233|peptidase activity	GO:0000502|proteasome complex GO:0005737|cytoplasm GO:0005829|cytosol GO:0005839|proteasome core complex GO:0005886|plasma membrane GO:0009507|chloroplast GO:0048046|apoplast
pt2_06501	B	B1S	Potri.002G148500	Potri.002G148500(BS)	POPTR_0002s14940	sp|Q9SZ74|CNIH5_ARATH	Protein cornichon homolog 5 OS=Arabidopsis thaliana GN=At4g12090 PE=2 SV=2	AT4G12090.1	| Symbols: | Cornichon family protein | chr4:7242165-7242924 REVERSE LENGTH=135	LOC_Os12g32180.1	protein|cornichon protein, putative, expressed	IMGA|Medtr5g011690.1	ER-derived vesicles protein ERV14 chr5 3162982-3160840 F EGN_Mt100125 20111014	GO:0035556|intracellular signal transduction	GO:0005515|protein binding	GO:0016020|membrane
pt2_06502	A	A1S	Potri.002G148600	Potri.002G148600(AS)	POPTR_0002s14950	NA	NA	AT4G12080.1	| Symbols: AHL1, ATAHL1 | AT-hook motif nuclear-localized protein 1 | chr4:7239466-7241246 FORWARD LENGTH=356	LOC_Os08g02490.1	protein|AT hook motif domain containing protein, expressed	IMGA|contig_62590_1.1	AT-hook motif nuclear localized protein contig_62590 587-3109 E PREDN 20111014	GO:0016132|brassinosteroid biosynthetic process	GO:0003677|DNA binding	GO:0005634|nucleus GO:0005730|nucleolus GO:0005737|cytoplasm GO:0005739|mitochondrion
pt2_06503	A	A1S	Potri.002G148800	Potri.002G148800(AS)	POPTR_0002s14960	NA	NA	AT2G03740.1	| Symbols: | late embryogenesis abundant domain-containing protein / LEA domain-containing protein | chr2:1142941-1143917 REVERSE LENGTH=189	NA	NA	NA	NA	GO:0009793|embryo development ending in seed dormancy GO:0010584|pollen exine formation	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_06504	B	B1S	Potri.002G148900	Potri.002G148900(BS)	POPTR_0002s14970	sp|O81322|LBD31_ARATH	LOB domain-containing protein 31 OS=Arabidopsis thaliana GN=LBD31 PE=2 SV=2	AT4G00210.1	| Symbols: LBD31 | LOB domain-containing protein 31 | chr4:85693-86888 REVERSE LENGTH=220	LOC_Os03g14270.1	protein|DUF260 domain containing protein, putative, expressed	IMGA|contig_89471_1.1	LOB domain protein-like protein contig_89471 1967-3043 H PREDN 20111014	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06505	A	A1S	Potri.002G149000	Potri.002G149000(AS)	POPTR_0002s15000	sp|O22131|LBD18_ARATH	LOB domain-containing protein 18 OS=Arabidopsis thaliana GN=LBD18 PE=2 SV=2	AT2G45420.1	| Symbols: LBD18 | LOB domain-containing protein 18 | chr2:18718601-18720445 FORWARD LENGTH=262	LOC_Os03g14270.1	protein|DUF260 domain containing protein, putative, expressed	IMGA|contig_89471_1.1	LOB domain protein-like protein contig_89471 1967-3043 H PREDN 20111014	GO:0007155|cell adhesion GO:0010089|xylem development GO:0010090|trichome morphogenesis GO:0010311|lateral root formation GO:0044036|cell wall macromolecule metabolic process GO:0045010|actin nucleation GO:0048765|root hair cell differentiation GO:0071555|cell wall organization	NA	GO:0005634|nucleus
pt2_06506	A	A1S	Potri.002G149100	Potri.002G149100(AS)	POPTR_0002s15010	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06507	A	A1S	Potri.002G149200	Potri.002G149200(AS)	POPTR_0002s15020	sp|Q9Y6D5|BIG2_HUMAN	Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Homo sapiens GN=ARFGEF2 PE=1 SV=3	AT3G60860.1	| Symbols: | SEC7-like guanine nucleotide exchange family protein | chr3:22484804-22491510 FORWARD LENGTH=1793	LOC_Os03g14260.1	protein|guanine nucleotide exchange family protein, putative, expressed	IMGA|Medtr5g099310.1	Brefeldin A-inhibited guanine nucleotide-exchange protein chr5 42521125-42512663 E EGN_Mt100125 20111014	GO:0016192|vesicle-mediated transport GO:0032012|regulation of ARF protein signal transduction GO:0050790|regulation of catalytic activity	GO:0005085|guanyl-nucleotide exchange factor activity GO:0005086|ARF guanyl-nucleotide exchange factor activity	GO:0005622|intracellular GO:0005737|cytoplasm GO:0005829|cytosol
pt2_06508	A	A1S	Potri.002G149200	Potri.002G149200(AS)	POPTR_0002s15020	sp|Q9Y6D5|BIG2_HUMAN	Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Homo sapiens GN=ARFGEF2 PE=1 SV=3	AT3G60860.1	| Symbols: | SEC7-like guanine nucleotide exchange family protein | chr3:22484804-22491510 FORWARD LENGTH=1793	LOC_Os03g14260.1	protein|guanine nucleotide exchange family protein, putative, expressed	IMGA|Medtr5g099310.1	Brefeldin A-inhibited guanine nucleotide-exchange protein chr5 42521125-42512663 E EGN_Mt100125 20111014	GO:0016192|vesicle-mediated transport GO:0032012|regulation of ARF protein signal transduction GO:0050790|regulation of catalytic activity	GO:0005085|guanyl-nucleotide exchange factor activity GO:0005086|ARF guanyl-nucleotide exchange factor activity	GO:0005622|intracellular GO:0005737|cytoplasm GO:0005829|cytosol
pt2_06509	A	A1S	Potri.002G149300	Potri.002G149300(AS)	POPTR_0002s15030	sp|Q9S7C9|ESCA_ARATH	Putative DNA-binding protein ESCAROLA OS=Arabidopsis thaliana GN=ESC PE=2 SV=1	AT2G45430.1	| Symbols: AHL22 | AT-hook motif nuclear-localized protein 22 | chr2:18727848-18728801 FORWARD LENGTH=317	LOC_Os02g25020.1	protein|DNA binding protein, putative, expressed	IMGA|contig_74397_1.1	AT-hook motif nuclear localized protein contig_74397 1922-494 F PREDN 20111014	GO:0000041|transition metal ion transport GO:0009640|photomorphogenesis GO:0009647|skotomorphogenesis GO:0010228|vegetative to reproductive phase transition of meristem GO:0010359|regulation of anion channel activity GO:0016132|brassinosteroid biosynthetic process	GO:0003680|AT DNA binding	GO:0005634|nucleus
pt2_06510	A	A1S	Potri.002G149400	Potri.002G149400(AS)	POPTR_0002s15040	sp|Q9LPC6|ARK2_ARATH	Armadillo repeat-containing kinesin-like protein 2 OS=Arabidopsis thaliana GN=ARK2 PE=1 SV=2	AT1G01950.1	| Symbols: ARK2 | armadillo repeat kinesin 2 | chr1:325473-330403 FORWARD LENGTH=894	LOC_Os06g04560.1	protein|kinesin motor domain containing protein, expressed	IMGA|Medtr5g011500.1	Kinesin-1 chr5 3071430-3079425 H EGN_Mt100125 20111014	GO:0048364|root development	GO:0003777|microtubule motor activity GO:0005524|ATP binding	NA
pt2_06511	A	A1S	Potri.002G149500	Potri.002G149500(AS)	POPTR_0002s15050	sp|Q9FVC8|DAPA2_ARATH	Dihydrodipicolinate synthase 2, chloroplastic OS=Arabidopsis thaliana GN=DHDPS2 PE=2 SV=2	AT2G45440.1	| Symbols: DHDPS2 | dihydrodipicolinate synthase | chr2:18731294-18732867 FORWARD LENGTH=365	LOC_Os04g18200.1	protein|dihydrodipicolinate synthase, chloroplast precursor, putative, expressed	NA	NA	GO:0008152|metabolic process GO:0009089|lysine biosynthetic process via diaminopimelate	GO:0003824|catalytic activity GO:0008840|dihydrodipicolinate synthase activity GO:0016829|lyase activity	GO:0009507|chloroplast
pt2_06512	A	A1S	Potri.002G149600	Potri.002G149600(AS)	POPTR_0002s15060	NA	NA	AT3G60890.2	| Symbols: ZPR2 | protein binding | chr3:22497024-22497442 REVERSE LENGTH=106	NA	NA	NA	NA	GO:0008150|biological_process	GO:0005515|protein binding	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_06513	A	A2S	Potri.002G149700	Potri.002G149700(AS) Potri.014G071600(BS)	POPTR_0002s15070	sp|P0C1I5|PPIL3_RHIO9	Peptidyl-prolyl cis-trans isomerase-like 3 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) GN=cyp4 PE=3 SV=1	AT1G01940.1	| Symbols: | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein | chr1:323082-324719 FORWARD LENGTH=160	LOC_Os06g04000.1	protein|peptidyl-prolyl cis-trans isomerase, putative, expressed	IMGA|AC225458_18.1	Peptidyl-prolyl cis-trans isomerase AC225458.11 44405-42269 E EGN_Mt100125 20111014	GO:0006457|protein folding	GO:0003755|peptidyl-prolyl cis-trans isomerase activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06514	A	A1S	Potri.002G149800	Potri.002G149800(AS)	POPTR_0002s15080	sp|Q66H85|ANKZ1_RAT	Ankyrin repeat and zinc finger domain-containing protein 1 OS=Rattus norvegicus GN=Ankzf1 PE=2 SV=1	AT1G01930.1	| Symbols: | zinc finger protein-related | chr1:320041-322809 REVERSE LENGTH=580	LOC_Os04g48520.1	protein|ZOS4-12 - C2H2 zinc finger protein, expressed	NA	NA	GO:0008150|biological_process GO:0009630|gravitropism	GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0005737|cytoplasm
pt2_06515	A	A1S	Potri.002G149800	Potri.002G149800(AS)	POPTR_0002s15080	sp|Q66H85|ANKZ1_RAT	Ankyrin repeat and zinc finger domain-containing protein 1 OS=Rattus norvegicus GN=Ankzf1 PE=2 SV=1	AT1G01930.1	| Symbols: | zinc finger protein-related | chr1:320041-322809 REVERSE LENGTH=580	LOC_Os04g48520.1	protein|ZOS4-12 - C2H2 zinc finger protein, expressed	NA	NA	GO:0008150|biological_process GO:0009630|gravitropism	GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0005737|cytoplasm
pt2_06516	A	A1S	Potri.002G149900	Potri.002G149900(AS)	POPTR_0002s15090	NA	NA	AT5G42660.1	| Symbols: | Protein of unknown function (DUF616) | chr5:17103062-17105785 REVERSE LENGTH=463	LOC_Os01g54530.1	protein|hydrolase, acting on carbon-nitrogen, putative, expressed	IMGA|contig_60680_1.1	Unknown protein contig_60680 1994-984 E PREDN 20111014	GO:0006672|ceramide metabolic process GO:0008150|biological_process	GO:0016757|transferase activity, transferring glycosyl groups	GO:0005634|nucleus GO:0016021|integral to membrane
pt2_06517	A	A1S	Potri.002G150000	Potri.002G150000(AS)	POPTR_0002s15100	sp|Q54U63|LVSC_DICDI	BEACH domain-containing protein lvsC OS=Dictyostelium discoideum GN=lvsC PE=4 SV=2	AT2G45540.1	| Symbols: | WD-40 repeat family protein / beige-related | chr2:18757881-18772229 REVERSE LENGTH=2946	LOC_Os04g46894.1	protein|beige/BEACH domain containing protein, expressed	IMGA|AC225458_104.1	Neurobeachin-like protein AC225458.11 389219-381396 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0000166|nucleotide binding	GO:0005575|cellular_component GO:0005886|plasma membrane
pt2_06518	A	A1S	Potri.002G150000	Potri.002G150000(AS)	POPTR_0002s15100	sp|Q54U63|LVSC_DICDI	BEACH domain-containing protein lvsC OS=Dictyostelium discoideum GN=lvsC PE=4 SV=2	AT2G45540.1	| Symbols: | WD-40 repeat family protein / beige-related | chr2:18757881-18772229 REVERSE LENGTH=2946	LOC_Os04g46894.1	protein|beige/BEACH domain containing protein, expressed	IMGA|AC225458_104.1	Neurobeachin-like protein AC225458.11 389219-381396 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0000166|nucleotide binding	GO:0005575|cellular_component GO:0005886|plasma membrane
pt2_06519	A	A1S	Potri.002G150000	Potri.002G150000(AS)	POPTR_0002s15100	sp|Q54U63|LVSC_DICDI	BEACH domain-containing protein lvsC OS=Dictyostelium discoideum GN=lvsC PE=4 SV=2	AT2G45540.1	| Symbols: | WD-40 repeat family protein / beige-related | chr2:18757881-18772229 REVERSE LENGTH=2946	LOC_Os04g46894.1	protein|beige/BEACH domain containing protein, expressed	IMGA|AC225458_104.1	Neurobeachin-like protein AC225458.11 389219-381396 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0000166|nucleotide binding	GO:0005575|cellular_component GO:0005886|plasma membrane
pt2_06520	A	A5S	Potri.002G150100	Potri.002G150100(AS) Potri.002G150500(BS) Potri.002G150400(BS) Potri.002G150200(BS) Potri.002G150300(BS)	POPTR_0002s15110	sp|O64635|C76C4_ARATH	Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CYP76C4 PE=2 SV=1	AT2G45550.1	| Symbols: CYP76C4 | cytochrome P450, family 76, subfamily C, polypeptide 4 | chr2:18773541-18775654 REVERSE LENGTH=511	LOC_Os03g14400.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g007450.1	Cytochrome P450 chr5 1126086-1128269 F EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	NA
pt2_06521	G	G2	NA	NA	POPTR_0002s15120	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06522	B	B1S	Potri.T036600	Potri.T036600(BS)	POPTR_0002s15130	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06523	A	A5S	Potri.002G150200	Potri.002G150200(AS) Potri.002G150500(BS) Potri.002G150400(BS) Potri.002G150100(BS) Potri.002G150300(BS)	POPTR_0002s15140	sp|O64635|C76C4_ARATH	Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CYP76C4 PE=2 SV=1	AT2G45550.1	| Symbols: CYP76C4 | cytochrome P450, family 76, subfamily C, polypeptide 4 | chr2:18773541-18775654 REVERSE LENGTH=511	LOC_Os03g14400.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g007450.1	Cytochrome P450 chr5 1126086-1128269 F EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	NA
pt2_06524	A	A5S	Potri.002G150400	Potri.002G150400(AS) Potri.002G150500(BS) Potri.002G150200(BS) Potri.002G150300(BS) Potri.002G150100(DS)	POPTR_0002s15150	sp|O64635|C76C4_ARATH	Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CYP76C4 PE=2 SV=1	AT2G45550.1	| Symbols: CYP76C4 | cytochrome P450, family 76, subfamily C, polypeptide 4 | chr2:18773541-18775654 REVERSE LENGTH=511	LOC_Os03g14400.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g007450.1	Cytochrome P450 chr5 1126086-1128269 F EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	NA
pt2_06525	A	A5S	Potri.002G150500	Potri.002G150500(AS) Potri.002G150400(BS) Potri.002G150100(BS) Potri.002G150200(BS) Potri.002G150300(BS)	POPTR_0002s15170	sp|O64635|C76C4_ARATH	Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CYP76C4 PE=2 SV=1	AT2G45550.1	| Symbols: CYP76C4 | cytochrome P450, family 76, subfamily C, polypeptide 4 | chr2:18773541-18775654 REVERSE LENGTH=511	LOC_Os03g14400.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g007460.1	Cytochrome P450 monooxygenase chr5 1131766-1133659 E EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	NA
pt2_06526	A	A1S	Potri.002G150600	Potri.002G150600(AS)	POPTR_0002s15180	NA	NA	AT1G08500.1	| Symbols: ENODL18, AtENODL18 | early nodulin-like protein 18 | chr1:2689110-2689881 FORWARD LENGTH=228	LOC_Os12g26880.1	protein|plastocyanin-like domain containing protein, putative, expressed	IMGA|Medtr5g088990.1	Early nodulin-like protein chr5 37604593-37606499 F EGN_Mt100125 20111014	NA	GO:0005507|copper ion binding GO:0009055|electron carrier activity	GO:0005886|plasma membrane GO:0031225|anchored to membrane
pt2_06527	A	A1S	Potri.002G150700	Potri.002G150700(AS)	POPTR_0002s15190	sp|Q5FWL4|EST2A_XENLA	Extended synaptotagmin-2-A OS=Xenopus laevis GN=esyt2-a PE=2 SV=1	AT3G61050.2	| Symbols: NTMC2TYPE4, NTMC2T4 | Calcium-dependent lipid-binding (CaLB domain) family protein | chr3:22597485-22600932 FORWARD LENGTH=510	LOC_Os07g22640.1	protein|lipid binding protein, putative, expressed	IMGA|Medtr1g094810.1	Synaptotagmin-1 chr1 26931190-26935882 H EGN_Mt100125 20111014	GO:0009414|response to water deprivation GO:0009651|response to salt stress GO:0009958|positive gravitropism GO:0045892|negative regulation of transcription, DNA-dependent	GO:0008289|lipid binding GO:0043565|sequence-specific DNA binding	GO:0005783|endoplasmic reticulum GO:0005886|plasma membrane GO:0031965|nuclear membrane
pt2_06528	A	A1S	Potri.002G150800	Potri.002G150800(AS)	POPTR_0002s15200	sp|O64639|Y2559_ARATH	Receptor-like serine/threonine-protein kinase At2g45590 OS=Arabidopsis thaliana GN=At2g45590 PE=2 SV=1	AT2G45590.1	| Symbols: | Protein kinase superfamily protein | chr2:18786725-18788776 FORWARD LENGTH=683	LOC_Os03g14710.1	protein|protein kinase, putative, expressed	IMGA|Medtr5g033690.1	Cysteine-rich receptor-like protein kinase chr5 14100663-14103784 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005575|cellular_component GO:0005886|plasma membrane
pt2_06529	A	A1S	Potri.002G150900	Potri.002G150900(AS)	POPTR_0002s15210	sp|O64641|CXE9_ARATH	Probable carboxylesterase 9 OS=Arabidopsis thaliana GN=CXE9 PE=2 SV=1	AT2G45610.1	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr2:18791463-18792437 FORWARD LENGTH=324	LOC_Os03g14730.1	protein|gibberellin receptor GID1L2, putative, expressed	IMGA|Medtr1g012430.1	Arylacetamide deacetylase chr1 2909844-2908906 H EGN_Mt100125 20111014	GO:0008152|metabolic process GO:0009827|plant-type cell wall modification GO:0009860|pollen tube growth	GO:0016787|hydrolase activity	GO:0005634|nucleus
pt2_06530	A	A1S	Potri.002G151000	Potri.002G151000(AS)	POPTR_0002s15230	sp|O74326|CID11_SCHPO	Poly(A) RNA polymerase cid11 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cid11 PE=2 SV=1	AT2G45620.1	| Symbols: | Nucleotidyltransferase family protein | chr2:18792943-18795750 FORWARD LENGTH=764	LOC_Os10g11034.1	protein|caffeine-induced death protein 1, putative, expressed	NA	NA	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0006487|protein N-linked glycosylation GO:0048573|photoperiodism, flowering	GO:0016779|nucleotidyltransferase activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06531	A	A1S	Potri.002G151100	Potri.002G151100(AS)	POPTR_0002s15240	sp|B6YWH0|GYAR_THEON	Glyoxylate reductase OS=Thermococcus onnurineus (strain NA1) GN=gyaR PE=3 SV=1	AT2G45630.2	| Symbols: | D-isomer specific 2-hydroxyacid dehydrogenase family protein | chr2:18796000-18797089 FORWARD LENGTH=338	LOC_Os04g01650.1	protein|erythronate-4-phosphate dehydrogenase domain containing protein, expressed	NA	NA	GO:0008152|metabolic process GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0048037|cofactor binding GO:0051287|NAD binding	GO:0005737|cytoplasm
pt2_06532	A	A1S	Potri.002G151200	Potri.002G151200(AS)	POPTR_0002s15250	sp|Q8U3Y2|GYAR_PYRFU	Glyoxylate reductase OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=gyaR PE=3 SV=1	AT2G45630.2	| Symbols: | D-isomer specific 2-hydroxyacid dehydrogenase family protein | chr2:18796000-18797089 FORWARD LENGTH=338	LOC_Os04g01650.1	protein|erythronate-4-phosphate dehydrogenase domain containing protein, expressed	NA	NA	GO:0008152|metabolic process GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0048037|cofactor binding GO:0051287|NAD binding	GO:0005737|cytoplasm
pt2_06533	A	A2S	Potri.002G151300	Potri.002G151300(AS) Potri.014G073700(DS)	POPTR_0002s15260	sp|Q39110|GAOX1_ARATH	Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=20ox1 PE=2 SV=2	AT4G25420.1	| Symbols: GA5, GA20OX1, AT2301, ATGA20OX1 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr4:12990982-12992409 REVERSE LENGTH=377	LOC_Os03g63970.1	protein|gibberellin 20 oxidase 1, putative, expressed	IMGA|Medtr1g102070.1	Gibberellin 20-oxidase chr1 30326838-30328879 E EGN_Mt100125 20111014	GO:0009686|gibberellin biosynthetic process GO:0009688|abscisic acid biosynthetic process GO:0009737|response to abscisic acid stimulus GO:0009739|response to gibberellin stimulus GO:0009740|gibberellic acid mediated signaling pathway GO:0009793|embryo development ending in seed dormancy GO:0009826|unidimensional cell growth GO:0009845|seed germination GO:0009908|flower development GO:0010162|seed dormancy process GO:0016114|terpenoid biosynthetic process GO:0048366|leaf development GO:0048575|short-day photoperiodism, flowering GO:0048608|reproductive structure development GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors GO:0045544|gibberellin 20-oxidase activity	GO:0005737|cytoplasm
pt2_06534	A	A2S	Potri.002G151400	Potri.002G151400(AS) Potri.014G073800(BS)	POPTR_0002s15270	sp|Q9LE59|GAUT1_ARATH	Polygalacturonate 4-alpha-galacturonosyltransferase OS=Arabidopsis thaliana GN=GAUT1 PE=1 SV=1	AT3G61130.1	| Symbols: GAUT1, LGT1 | galacturonosyltransferase 1 | chr3:22622399-22625514 FORWARD LENGTH=673	LOC_Os09g36190.2	protein|glycosyl transferase family 8, putative, expressed	IMGA|contig_11902_1.1	Glycosyl transferase family 8 protein expressed contig_11902 178-869 E PREDN 20111014	GO:0010075|regulation of meristem growth GO:0010289|homogalacturonan biosynthetic process GO:0016051|carbohydrate biosynthetic process	GO:0016757|transferase activity, transferring glycosyl groups GO:0047262|polygalacturonate 4-alpha-galacturonosyltransferase activity	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_06535	A	A1S	Potri.002G151500	Potri.002G151500(AS)	POPTR_0002s15280	sp|O64644|SAP18_ARATH	Histone deacetylase complex subunit SAP18 OS=Arabidopsis thaliana GN=At2g45640 PE=1 SV=1	AT2G45640.1	| Symbols: SAP18, ATSAP18 | SIN3 associated polypeptide P18 | chr2:18799881-18801323 REVERSE LENGTH=152	LOC_Os02g02960.1	protein|histone deacetylase complex subunit SAP18, putative, expressed	NA	NA	GO:0009062|fatty acid catabolic process GO:0009651|response to salt stress GO:0009737|response to abscisic acid stimulus	GO:0005515|protein binding	GO:0005634|nucleus GO:0005730|nucleolus
pt2_06536	G	G1	NA	NA	POPTR_0002s15290	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06537	A	A1S	Potri.002G151700	Potri.002G151700(AS)	POPTR_0002s15300	sp|O64645|SOC1_ARATH	MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1	AT2G45660.1	| Symbols: AGL20, SOC1, ATSOC1 | AGAMOUS-like 20 | chr2:18807799-18810193 REVERSE LENGTH=214	LOC_Os10g39130.1	protein|OsMADS56 - MADS-box family gene with MIKCc type-box, expressed	IMGA|Medtr5g031000.2	MADS-box protein chr5 12873379-12860456 F EGN_Mt100125 20111014	GO:0000060|protein import into nucleus, translocation GO:0006355|regulation of transcription, DNA-dependent GO:0009409|response to cold GO:0009739|response to gibberellin stimulus GO:0009908|flower development GO:0009911|positive regulation of flower development GO:0010048|vernalization response GO:0010077|maintenance of inflorescence meristem identity GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0045893|positive regulation of transcription, DNA-dependent GO:0048440|carpel development GO:0048481|ovule development	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0008134|transcription factor binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_06538	C	C1S	Potri.002G151700	Potri.002G151700(CS)	sp|O64645|SOC1_ARATH	MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1	AT2G45660.1	| Symbols: AGL20, SOC1, ATSOC1 | AGAMOUS-like 20 | chr2:18807799-18810193 REVERSE LENGTH=214	LOC_Os10g39130.1	protein|OsMADS56 - MADS-box family gene with MIKCc type-box, expressed	IMGA|Medtr5g031000.2	MADS-box protein chr5 12873379-12860456 F EGN_Mt100125 20111014	GO:0000060|protein import into nucleus, translocation GO:0006355|regulation of transcription, DNA-dependent GO:0009409|response to cold GO:0009739|response to gibberellin stimulus GO:0009908|flower development GO:0009911|positive regulation of flower development GO:0010048|vernalization response GO:0010077|maintenance of inflorescence meristem identity GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0045893|positive regulation of transcription, DNA-dependent GO:0048440|carpel development GO:0048481|ovule development	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0008134|transcription factor binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_06539	A	A1S	Potri.002G151800	Potri.002G151800(AS)	POPTR_0002s15320	sp|Q8BYI6|PCAT2_MOUSE	Lysophosphatidylcholine acyltransferase 2 OS=Mus musculus GN=Lpcat2 PE=1 SV=1	AT2G45670.1	| Symbols: | calcineurin B subunit-related | chr2:18815070-18818382 REVERSE LENGTH=539	LOC_Os06g49790.1	protein|acyltransferase, putative, expressed	NA	NA	GO:0006655|phosphatidylglycerol biosynthetic process GO:0008152|metabolic process	GO:0005509|calcium ion binding GO:0016746|transferase activity, transferring acyl groups	NA
pt2_06540	A	A1S	Potri.002G151900	Potri.002G151900(AS)	POPTR_0002s15330	sp|Q9LLL8|XSP1_ARATH	Xylem serine proteinase 1 OS=Arabidopsis thaliana GN=XSP1 PE=2 SV=1	AT4G00230.1	| Symbols: XSP1 | xylem serine peptidase 1 | chr4:93935-97289 FORWARD LENGTH=749	LOC_Os08g35090.1	protein|OsSub56 - Putative Subtilisin homologue, expressed	IMGA|Medtr5g055920.1	Subtilisin-like protease chr5 22497235-22500845 H EGN_Mt100125 20111014	GO:0006508|proteolysis GO:0008152|metabolic process GO:0043086|negative regulation of catalytic activity	GO:0004252|serine-type endopeptidase activity GO:0042802|identical protein binding	GO:0005576|extracellular region GO:0005618|cell wall GO:0009505|plant-type cell wall
pt2_06541	A	A1S	Potri.002G152000	Potri.002G152000(AS)	POPTR_0002s15340	sp|O65351|SUBL_ARATH	Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1	AT5G67360.1	| Symbols: ARA12 | Subtilase family protein | chr5:26872192-26874465 REVERSE LENGTH=757	LOC_Os02g53860.1	protein|OsSub22 - Putative Subtilisin homologue, expressed	IMGA|Medtr5g016120.1	Subtilisin-like protease chr5 5470271-5467977 H EGN_Mt100125 20111014	GO:0006508|proteolysis GO:0010214|seed coat development GO:0043086|negative regulation of catalytic activity GO:0048359|mucilage metabolic process involved seed coat development GO:0080001|mucilage extrusion from seed coat	GO:0004252|serine-type endopeptidase activity GO:0042802|identical protein binding	GO:0005576|extracellular region GO:0005618|cell wall GO:0009505|plant-type cell wall GO:0048046|apoplast
pt2_06542	A	A1S	Potri.002G152100	Potri.002G152100(AS)	POPTR_0002s15350	sp|P93733|PLDB1_ARATH	Phospholipase D beta 1 OS=Arabidopsis thaliana GN=PLDBETA1 PE=2 SV=4	AT2G42010.1	| Symbols: PLDBETA1, PLDBETA | phospholipase D beta 1 | chr2:17533018-17537990 REVERSE LENGTH=1083	LOC_Os10g38060.2	protein|phospholipase D, putative, expressed	IMGA|Medtr5g011050.1	Phospholipase D chr5 2872473-2867595 E EGN_Mt100125 20111014	GO:0008152|metabolic process GO:0009816|defense response to bacterium, incompatible interaction GO:0046686|response to cadmium ion	GO:0003824|catalytic activity GO:0004630|phospholipase D activity GO:0005515|protein binding GO:0005546|phosphatidylinositol-4,5-bisphosphate binding	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_06543	A	A1S	Potri.002G152200	Potri.002G152200(AS)	POPTR_0002s15360	sp|O64647|TCP9_ARATH	Transcription factor TCP9 OS=Arabidopsis thaliana GN=TCP9 PE=2 SV=1	AT2G45680.1	| Symbols: | TCP family transcription factor | chr2:18820717-18821787 REVERSE LENGTH=356	LOC_Os08g43160.1	protein|TCP family transcription factor, putative, expressed	IMGA|Medtr1g101810.1	TCP family transcription factor chr1 30139632-30141131 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0008361|regulation of cell size GO:0048364|root development GO:1900056|negative regulation of leaf senescence	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_06544	A	A1S	Potri.002G152300	Potri.002G152300(AS)	POPTR_0002s15370	sp|Q8S8S1|PEX16_ARATH	Peroxisome biogenesis protein 16 OS=Arabidopsis thaliana GN=PEX16 PE=1 SV=1	AT2G45690.1	| Symbols: SSE1, SSE, PEX16, ATPEX16 | shrunken seed protein (SSE1) | chr2:18823465-18825601 REVERSE LENGTH=367	LOC_Os02g03070.1	protein|SSE1, putative, expressed	NA	NA	GO:0006633|fatty acid biosynthetic process GO:0006635|fatty acid beta-oxidation GO:0007031|peroxisome organization	GO:0003674|molecular_function	GO:0005777|peroxisome GO:0005789|endoplasmic reticulum membrane
pt2_06545	B	B1S	Potri.002G152300	Potri.002G152300(BS)	POPTR_0002s15370	sp|Q8S8S1|PEX16_ARATH	Peroxisome biogenesis protein 16 OS=Arabidopsis thaliana GN=PEX16 PE=1 SV=1	AT2G45690.1	| Symbols: SSE1, SSE, PEX16, ATPEX16 | shrunken seed protein (SSE1) | chr2:18823465-18825601 REVERSE LENGTH=367	LOC_Os02g03070.1	protein|SSE1, putative, expressed	NA	NA	GO:0006633|fatty acid biosynthetic process GO:0006635|fatty acid beta-oxidation GO:0007031|peroxisome organization	GO:0003674|molecular_function	GO:0005777|peroxisome GO:0005789|endoplasmic reticulum membrane
pt2_06546	A	A1S	Potri.002G152400	Potri.002G152400(AS)	POPTR_0002s15380	sp|B3H7G2|URM12_ARATH	Ubiquitin-related modifier 1 homolog 2 OS=Arabidopsis thaliana GN=URM1-2 PE=3 SV=1	AT3G61113.1	| Symbols: | Ubiquitin related modifier 1 | chr3:22614582-22615415 REVERSE LENGTH=99	LOC_Os07g28280.1	protein|ubiquitin-related modifier 1, putative, expressed	IMGA|contig_67115_1.1	Ubiquitin-related modifier 1 homolog contig_67115 1577-21 E PREDN 20111014	GO:0008150|biological_process GO:0034227|tRNA thio-modification	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_06547	A	A2S	Potri.002G152500	Potri.002G152500(AS) Potri.014G078100(DS)	POPTR_0002s15390	sp|Q16MG9|ASNA_AEDAE	ATPase ASNA1 homolog OS=Aedes aegypti GN=AAEL011136 PE=3 SV=1	AT1G01910.4	| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:313595-315831 REVERSE LENGTH=353	LOC_Os09g34970.1	protein|arsenical pump-driving ATPase, putative, expressed	IMGA|Medtr1g094680.1	ATPase ASNA1-like protein chr1 26869225-26865411 F EGN_Mt100125 20111014	GO:0006820|anion transport GO:0006891|intra-Golgi vesicle-mediated transport GO:0006944|cellular membrane fusion GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0043248|proteasome assembly GO:0051788|response to misfolded protein GO:0071722|detoxification of arsenic-containing substance	GO:0005515|protein binding GO:0005524|ATP binding GO:0016887|ATPase activity	GO:0009507|chloroplast GO:0016020|membrane
pt2_06548	A	A1S	Potri.002G152600	Potri.002G152600(AS)	POPTR_0002s15400	NA	NA	AT5G62150.1	| Symbols: | peptidoglycan-binding LysM domain-containing protein | chr5:24958325-24958633 FORWARD LENGTH=102	LOC_Os03g02685.1	protein|lysM domain containing protein, putative, expressed	IMGA|Medtr1g101680.1	hypothetical protein chr1 30098448-30099168 F EGN_Mt100125 20111014	GO:0016998|cell wall macromolecule catabolic process	GO:0003674|molecular_function	NA
pt2_06549	A	A1S	Potri.002G152700	Potri.002G152700(AS)	POPTR_0002s15410	NA	NA	AT4G00770.1	| Symbols: | unknown protein; Has 127 Blast hits to 120 proteins in 33 species: Archae - 0; Bacteria - 2; Metazoa - 6; Fungi - 8; Plants - 62; Viruses - 3; Other Eukaryotes - 46 (source: NCBI BLink). | chr4:331195-333050 FORWARD LENGTH=440	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06550	C	C1S	Potri.002G152900	Potri.002G152900(CS)	sp|Q9ZWJ9|ARR2_ARATH	Two-component response regulator ARR2 OS=Arabidopsis thaliana GN=ARR2 PE=1 SV=1	AT4G16110.1	| Symbols: ARR2, RR2 | response regulator 2 | chr4:9112979-9115785 FORWARD LENGTH=664	LOC_Os01g67770.1	protein|two-component response regulator, putative, expressed	IMGA|contig_237666_1.1	Response regulator contig_237666 1374-391 H PREDN 20111014	GO:0000160|two-component signal transduction system (phosphorelay) GO:0006355|regulation of transcription, DNA-dependent GO:0007623|circadian rhythm GO:0009723|response to ethylene stimulus GO:0009735|response to cytokinin stimulus GO:0009736|cytokinin mediated signaling pathway GO:0009873|ethylene mediated signaling pathway GO:0010029|regulation of seed germination GO:0010119|regulation of stomatal movement GO:0010150|leaf senescence GO:0031537|regulation of anthocyanin metabolic process GO:0048831|regulation of shoot development	GO:0000156|two-component response regulator activity GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_06551	A	A2S	Potri.002G152900	Potri.002G152900(AS) Potri.014G077200(DS)	POPTR_0002s15430	sp|Q9ZWJ9|ARR2_ARATH	Two-component response regulator ARR2 OS=Arabidopsis thaliana GN=ARR2 PE=1 SV=1	AT4G16110.1	| Symbols: ARR2, RR2 | response regulator 2 | chr4:9112979-9115785 FORWARD LENGTH=664	LOC_Os01g67770.1	protein|two-component response regulator, putative, expressed	IMGA|contig_237666_1.1	Response regulator contig_237666 1374-391 H PREDN 20111014	GO:0000160|two-component signal transduction system (phosphorelay) GO:0006355|regulation of transcription, DNA-dependent GO:0007623|circadian rhythm GO:0009723|response to ethylene stimulus GO:0009735|response to cytokinin stimulus GO:0009736|cytokinin mediated signaling pathway GO:0009873|ethylene mediated signaling pathway GO:0010029|regulation of seed germination GO:0010119|regulation of stomatal movement GO:0010150|leaf senescence GO:0031537|regulation of anthocyanin metabolic process GO:0048831|regulation of shoot development	GO:0000156|two-component response regulator activity GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_06552	A	A1S	Potri.002G153000	Potri.002G153000(AS)	POPTR_0002s15440	NA	NA	AT1G01840.1	| Symbols: | unknown protein; Has 23 Blast hits to 23 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:303650-304108 FORWARD LENGTH=152	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_06553	A	A1S	Potri.002G153100	Potri.002G153100(AS)	POPTR_0002s15450	sp|Q9LEW8|FN3KR_ARATH	Protein-ribulosamine 3-kinase, chloroplastic OS=Arabidopsis thaliana GN=At3g61080 PE=1 SV=2	AT3G61080.1	| Symbols: | Protein kinase superfamily protein | chr3:22607152-22608883 FORWARD LENGTH=326	LOC_Os03g02640.1	protein|methylthioribose kinase, putative, expressed	NA	NA	GO:0015996|chlorophyll catabolic process	GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_06554	B	B1S	Potri.002G153200	Potri.002G153200(BS)	POPTR_0002s15460	sp|Q8LDS2|XTH27_ARATH	Probable xyloglucan endotransglucosylase/hydrolase protein 27 OS=Arabidopsis thaliana GN=XTH27 PE=2 SV=2	AT2G01850.1	| Symbols: EXGT-A3, XTH27, ATXTH27 | endoxyloglucan transferase A3 | chr2:385374-387138 FORWARD LENGTH=333	LOC_Os03g02610.1	protein|glycosyl hydrolases family 16 protein, protein, expressed	IMGA|Medtr5g091730.1	Xyloglucan endotransglucosylase/hydrolase chr5 38992618-38991125 E EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0006073|cellular glucan metabolic process GO:0010087|phloem or xylem histogenesis	GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0016762|xyloglucan:xyloglucosyl transferase activity GO:0016798|hydrolase activity, acting on glycosyl bonds	GO:0005576|extracellular region GO:0005618|cell wall GO:0048046|apoplast
pt2_06555	A	A1S	Potri.002G153400	Potri.002G153400(AS)	POPTR_0002s15470	sp|Q9SL78|ATL12_ARATH	Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana GN=ATL12 PE=2 SV=1	AT2G20030.1	| Symbols: | RING/U-box superfamily protein | chr2:8647813-8648985 FORWARD LENGTH=390	LOC_Os02g45390.1	protein|RING-H2 finger protein, putative, expressed	IMGA|Medtr5g064890.1	RING-H2 finger protein ATL1O chr5 26287066-26288801 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0008270|zinc ion binding	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_06556	A	A1S	Potri.002G153500	Potri.002G153500(AS)	POPTR_0002s15480	sp|Q6J9S1|RA211_ARATH	Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana GN=RAP2-11 PE=2 SV=1	AT5G19790.1	| Symbols: RAP2.11 | related to AP2 11 | chr5:6689271-6690032 REVERSE LENGTH=253	LOC_Os07g10410.1	protein|AP2 domain containing protein, expressed	IMGA|contig_81134_1.1	Ethylene responsive transcription factor 2b contig_81134 2959-3876 H PREDN 20111014	GO:0000302|response to reactive oxygen species GO:0009723|response to ethylene stimulus GO:0035865|cellular response to potassium ion GO:0048528|post-embryonic root development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_06557	A	A1S	Potri.002G153600	Potri.002G153600(AS)	POPTR_0002s15490	sp|P92965|RSP40_ARATH	Arginine/serine-rich-splicing factor RSP40 OS=Arabidopsis thaliana GN=RSP40 PE=1 SV=2	AT4G25500.4	| Symbols: RSP35, RS40, At-RS40 | arginine/serine-rich splicing factor 35 | chr4:13025168-13027243 FORWARD LENGTH=350	LOC_Os02g03040.1	protein|RNA recognition motif containing protein, expressed	IMGA|Medtr1g101520.1	Arginine/serine-rich-splicing factor RSP40 chr1 30031048-30026916 E EGN_Mt100125 20111014	GO:0000398|mRNA splicing, via spliceosome GO:0008380|RNA splicing	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005634|nucleus GO:0005681|spliceosomal complex GO:0016607|nuclear speck
pt2_06558	A	A1S	Potri.002G153700	Potri.002G153700(AS)	POPTR_0002s15500	sp|Q8GWV5|PUB3_ARATH	U-box domain-containing protein 3 OS=Arabidopsis thaliana GN=PUB3 PE=2 SV=2	AT2G45720.2	| Symbols: | ARM repeat superfamily protein | chr2:18834468-18836129 FORWARD LENGTH=553	LOC_Os10g37850.3	protein|armadillo, putative, expressed	IMGA|Medtr5g092900.1	Armadillo/beta-catenin-like repeat family protein expressed chr5 39520756-39521301 H EGN_Mt100125 20111014	GO:0008150|biological_process GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process	NA	NA
pt2_06559	A	A1S	Potri.002G153800	Potri.002G153800(AS)	POPTR_0002s15510	sp|O80845|PX11D_ARATH	Peroxisomal membrane protein 11D OS=Arabidopsis thaliana GN=PEX11D PE=1 SV=2	AT2G45740.3	| Symbols: PEX11D | peroxin 11D | chr2:18839865-18841102 FORWARD LENGTH=236	LOC_Os03g02590.4	protein|peroxisomal biogenesis factor 11, putative, expressed	NA	NA	GO:0007031|peroxisome organization GO:0016559|peroxisome fission	GO:0003674|molecular_function GO:0005515|protein binding GO:0042802|identical protein binding	GO:0005739|mitochondrion GO:0005777|peroxisome GO:0005778|peroxisomal membrane GO:0005779|integral to peroxisomal membrane GO:0009507|chloroplast
pt2_06560	A	A1S	Potri.002G153800	Potri.002G153800(AS)	POPTR_0002s15510	sp|O80845|PX11D_ARATH	Peroxisomal membrane protein 11D OS=Arabidopsis thaliana GN=PEX11D PE=1 SV=2	AT2G45740.3	| Symbols: PEX11D | peroxin 11D | chr2:18839865-18841102 FORWARD LENGTH=236	LOC_Os03g02590.4	protein|peroxisomal biogenesis factor 11, putative, expressed	NA	NA	GO:0007031|peroxisome organization GO:0016559|peroxisome fission	GO:0003674|molecular_function GO:0005515|protein binding GO:0042802|identical protein binding	GO:0005739|mitochondrion GO:0005777|peroxisome GO:0005778|peroxisomal membrane GO:0005779|integral to peroxisomal membrane GO:0009507|chloroplast
pt2_06561	A	A1S	Potri.002G153900	Potri.002G153900(AS)	POPTR_0002s15520	sp|Q8LG03|FB345_ARATH	F-box protein At4g00755 OS=Arabidopsis thaliana GN=At4g00755 PE=2 SV=1	AT4G00755.2	| Symbols: | F-box family protein | chr4:325294-326787 FORWARD LENGTH=377	LOC_Os03g02560.1	protein|cyclin-like F-box, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_06562	A	A1S	Potri.002G154000	Potri.002G154000(AS)	POPTR_0002s15530	sp|Q7GCL7|NAC74_ORYSJ	NAC domain-containing protein 74 OS=Oryza sativa subsp. japonica GN=NAC74 PE=2 SV=1	AT1G33060.2	| Symbols: ANAC014, NAC014 | NAC 014 | chr1:11975518-11978493 REVERSE LENGTH=652	LOC_Os08g06140.2	protein|no apical meristem protein, putative, expressed	IMGA|Medtr5g069030.2	NAC domain protein chr5 28228664-28232502 F EGN_Mt100125 20111014	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0006355|regulation of transcription, DNA-dependent GO:0007275|multicellular organismal development GO:0009086|methionine biosynthetic process GO:0009616|virus induced gene silencing GO:0010050|vegetative phase change	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06563	A	A1S	Potri.002G154000	Potri.002G154000(AS)	POPTR_0002s15540	sp|Q7GCL7|NAC74_ORYSJ	NAC domain-containing protein 74 OS=Oryza sativa subsp. japonica GN=NAC74 PE=2 SV=1	AT1G33060.2	| Symbols: ANAC014, NAC014 | NAC 014 | chr1:11975518-11978493 REVERSE LENGTH=652	LOC_Os08g06140.2	protein|no apical meristem protein, putative, expressed	IMGA|Medtr5g069030.2	NAC domain protein chr5 28228664-28232502 F EGN_Mt100125 20111014	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0006355|regulation of transcription, DNA-dependent GO:0007275|multicellular organismal development GO:0009086|methionine biosynthetic process GO:0009616|virus induced gene silencing GO:0010050|vegetative phase change	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06564	A	A1S	Potri.002G154100	Potri.002G154100(AS)	POPTR_0002s15550	sp|Q52QH4|NAC68_ORYSJ	NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1	AT1G33060.2	| Symbols: ANAC014, NAC014 | NAC 014 | chr1:11975518-11978493 REVERSE LENGTH=652	LOC_Os08g06140.1	protein|no apical meristem protein, putative, expressed	IMGA|Medtr5g069030.2	NAC domain protein chr5 28228664-28232502 F EGN_Mt100125 20111014	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0000956|nuclear-transcribed mRNA catabolic process GO:0006355|regulation of transcription, DNA-dependent GO:0006487|protein N-linked glycosylation GO:0007275|multicellular organismal development GO:0008284|positive regulation of cell proliferation GO:0009086|methionine biosynthetic process GO:0009616|virus induced gene silencing GO:0010050|vegetative phase change GO:0031347|regulation of defense response GO:0045892|negative regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0005516|calmodulin binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06565	A	A1S	Potri.002G154200	Potri.002G154200(AS)	POPTR_0002s15560	sp|Q9M126|NAC69_ARATH	NAC domain-containing protein 69 OS=Arabidopsis thaliana GN=NAC69 PE=2 SV=1	AT4G35580.1	| Symbols: NTL9 | NAC transcription factor-like 9 | chr4:16888581-16890744 REVERSE LENGTH=512	LOC_Os06g01230.2	protein|no apical meristem protein, putative, expressed	IMGA|Medtr5g069030.2	NAC domain protein chr5 28228664-28232502 F EGN_Mt100125 20111014	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0006355|regulation of transcription, DNA-dependent GO:0006487|protein N-linked glycosylation GO:0008284|positive regulation of cell proliferation GO:0031347|regulation of defense response GO:0045892|negative regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0005516|calmodulin binding	GO:0005634|nucleus
pt2_06566	B	B1S	Potri.002G154300	Potri.002G154300(BS)	POPTR_0002s15570	sp|Q9LEX0|P2A13_ARATH	F-box protein PP2-A13 OS=Arabidopsis thaliana GN=PP2A13 PE=1 SV=1	AT3G61060.2	| Symbols: AtPP2-A13, PP2-A13 | phloem protein 2-A13 | chr3:22603166-22604336 FORWARD LENGTH=291	LOC_Os04g48270.2	protein|OsFBX148 - F-box domain containing protein, expressed	IMGA|Medtr5g010800.1	F-box family protein chr5 2729633-2732548 F EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0009611|response to wounding GO:0009744|response to sucrose stimulus GO:0009750|response to fructose stimulus	GO:0005515|protein binding GO:0030246|carbohydrate binding	GO:0005634|nucleus
pt2_06567	A	A1S	Potri.002G154400	Potri.002G154400(AS)	POPTR_0002s15580	sp|Q9ZPH9|PMTF_ARATH	Probable methyltransferase PMT15 OS=Arabidopsis thaliana GN=At4g00750 PE=1 SV=1	AT4G00750.1	| Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr4:314405-317507 FORWARD LENGTH=633	LOC_Os04g48230.2	protein|dehydration response related protein, putative, expressed	IMGA|Medtr1g101370.1	hypothetical protein chr1 29962059-29958768 H EGN_Mt100125 20111014	NA	GO:0008168|methyltransferase activity	GO:0005634|nucleus GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_06568	A	A1S	Potri.002G154500	Potri.002G154500(AS)	POPTR_0002s15590	sp|P45432|CSN1_ARATH	COP9 signalosome complex subunit 1 OS=Arabidopsis thaliana GN=CSN1 PE=1 SV=2	AT3G61140.1	| Symbols: FUS6, ATFUS6, CSN1, COP11, EMB78, ATSK31, SK31 | 26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain | chr3:22626335-22628895 FORWARD LENGTH=441	LOC_Os03g02540.1	protein|proteasome subunit, putative, expressed	NA	NA	GO:0000003|reproduction GO:0000338|protein deneddylation GO:0006325|chromatin organization GO:0006461|protein complex assembly GO:0006972|hyperosmotic response GO:0007062|sister chromatid cohesion GO:0007131|reciprocal meiotic recombination GO:0009640|photomorphogenesis GO:0009646|response to absence of light GO:0009651|response to salt stress GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009880|embryonic pattern specification GO:0009909|regulation of flower development GO:0009933|meristem structural organization GO:0010072|primary shoot apical meristem specification GO:0010090|trichome morphogenesis GO:0010162|seed dormancy process GO:0010182|sugar mediated signaling pathway GO:0010228|vegetative to reproductive phase transition of meristem GO:0010388|cullin deneddylation GO:0010431|seed maturation GO:0010564|regulation of cell cycle process GO:0010638|positive regulation of organelle organization GO:0016567|protein ubiquitination GO:0016571|histone methylation GO:0016579|protein deubiquitination GO:0019915|lipid storage GO:0033044|regulation of chromosome organization GO:0045595|regulation of cell differentiation GO:0045893|positive regulation of transcription, DNA-dependent GO:0048366|leaf development GO:0048825|cotyledon development GO:0050826|response to freezing	GO:0005515|protein binding	GO:0005634|nucleus GO:0005829|cytosol GO:0008180|signalosome
pt2_06569	A	A1S	Potri.002G154600	Potri.002G154600(AS)	POPTR_0002s15600	sp|O04603|RK5_ARATH	50S ribosomal protein L5, chloroplastic OS=Arabidopsis thaliana GN=RPL5 PE=1 SV=1	AT4G01310.1	| Symbols: | Ribosomal L5P family protein | chr4:544166-545480 REVERSE LENGTH=262	LOC_Os03g03360.1	protein|ribosomal protein L5, putative, expressed	NA	NA	GO:0006412|translation GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019344|cysteine biosynthetic process	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005840|ribosome GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope GO:0016020|membrane GO:0022625|cytosolic large ribosomal subunit GO:0022626|cytosolic ribosome
pt2_06570	A	A1S	Potri.002G154700	Potri.002G154700(AS)	POPTR_0002s15610	sp|Q0WV12|ANL2_ARATH	Homeobox-leucine zipper protein ANTHOCYANINLESS 2 OS=Arabidopsis thaliana GN=ANL2 PE=2 SV=1	AT4G00730.1	| Symbols: ANL2, AHDP | Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein | chr4:299741-304103 REVERSE LENGTH=802	LOC_Os02g45250.1	protein|homeobox and START domains containing protein, putative, expressed	IMGA|Medtr5g029320.1	Homeobox-leucine zipper protein ROC3 chr5 12022721-12028684 H EGN_Mt100125 20111014	GO:0006473|protein acetylation GO:0042335|cuticle development GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0048364|root development GO:0048765|root hair cell differentiation	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_06571	A	A1S	Potri.002G154800	Potri.002G154800(AS)	POPTR_0002s15620	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06572	A	A1S	Potri.002G154900	Potri.002G154900(AS)	POPTR_0002s15630	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06573	A	A2S	Potri.002G155000	Potri.002G155000(AS) Potri.014G075100(DS)	POPTR_0002s15640	sp|Q96287|KSG8_ARATH	Shaggy-related protein kinase theta OS=Arabidopsis thaliana GN=ASK8 PE=2 SV=3	AT4G00720.1	| Symbols: ATSK32, ASKTHETA, SK32 | shaggy-like protein kinase 32 | chr4:294116-297002 REVERSE LENGTH=472	LOC_Os10g37740.1	protein|CGMC_GSK.9 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	IMGA|Medtr1g084760.1	Glycogen synthase kinase chr1 22264811-22261004 F EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0009741|response to brassinosteroid stimulus GO:0046777|protein autophosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus GO:0005829|cytosol
pt2_06574	A	A1S	Potri.002G155100	Potri.002G155100(AS)	POPTR_0002s15650	sp|Q9ZUW3|PP172_ARATH	Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1	AT3G61170.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:22638691-22641237 REVERSE LENGTH=783	LOC_Os09g07780.1	protein|pentatricopeptide repeat protein PPR986-12, putative, expressed	IMGA|Medtr1g039030.1	Pentatricopeptide repeat-containing protein chr1 10415859-10412393 H EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005739|mitochondrion
pt2_06575	A	A1S	Potri.002G155200	Potri.002G155200(AS)	POPTR_0002s15660	sp|Q93Z92|RING4_ARATH	E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana GN=At4g11680 PE=2 SV=1	AT3G61180.1	| Symbols: | RING/U-box superfamily protein | chr3:22645680-22647290 FORWARD LENGTH=379	LOC_Os02g45240.1	protein|zinc finger family protein, putative, expressed	IMGA|Medtr5g010720.1	E3 ubiquitin-protein ligase chr5 2682512-2676180 F EGN_Mt100125 20111014	NA	GO:0008270|zinc ion binding	GO:0005634|nucleus GO:0005774|vacuolar membrane
pt2_06576	A	A1S	Potri.002G155300	Potri.002G155300(AS)	POPTR_0002s15670	sp|Q58FX0|BAP2_ARATH	BON1-associated protein 2 OS=Arabidopsis thaliana GN=BAP2 PE=1 SV=1	AT2G45760.1	| Symbols: BAP2, BAL | BON association protein 2 | chr2:18847125-18847748 REVERSE LENGTH=207	LOC_Os09g35780.1	protein|BAP2, putative, expressed	IMGA|contig_78563_1.1	Unknown protein contig_78563 651-1408 F PREDN 20111014	GO:0008150|biological_process GO:0009627|systemic acquired resistance GO:0009693|ethylene biosynthetic process GO:0009697|salicylic acid biosynthetic process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_06577	A	A2S	Potri.002G155400	Potri.002G155400(AS) Potri.002G155500(AA)	POPTR_0002s15680	sp|O80842|CFTSY_ARATH	Cell division protein FtsY homolog, chloroplastic OS=Arabidopsis thaliana GN=CPFTSY PE=1 SV=2	AT2G45770.1	| Symbols: CPFTSY, FRD4 | signal recognition particle receptor protein, chloroplast (FTSY) | chr2:18851248-18853402 FORWARD LENGTH=366	LOC_Os01g72800.1	protein|signal recognition particle receptor, putative, expressed	NA	NA	GO:0006364|rRNA processing GO:0006605|protein targeting GO:0006614|SRP-dependent cotranslational protein targeting to membrane GO:0009772|photosynthetic electron transport in photosystem II GO:0009902|chloroplast relocation GO:0010027|thylakoid membrane organization GO:0010207|photosystem II assembly GO:0010267|production of ta-siRNAs involved in RNA interference GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0034660|ncRNA metabolic process GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0035304|regulation of protein dephosphorylation GO:0042793|transcription from plastid promoter GO:0045038|protein import into chloroplast thylakoid membrane GO:0045893|positive regulation of transcription, DNA-dependent GO:0051607|defense response to virus	GO:0000166|nucleotide binding GO:0005515|protein binding GO:0005525|GTP binding GO:0017111|nucleoside-triphosphatase activity	GO:0005786|signal recognition particle, endoplasmic reticulum targeting GO:0009507|chloroplast GO:0009534|chloroplast thylakoid
pt2_06578	A	A1S	Potri.002G155500	Potri.002G155500(AS)	POPTR_0002s15690	NA	NA	AT3G61200.1	| Symbols: | Thioesterase superfamily protein | chr3:22657599-22658350 REVERSE LENGTH=188	LOC_Os07g27870.1	protein|thioesterase family protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0016788|hydrolase activity, acting on ester bonds GO:0047617|acyl-CoA hydrolase activity	GO:0005634|nucleus GO:0005777|peroxisome
pt2_06579	A	A1S	Potri.002G155600	Potri.002G155600(AS)	POPTR_0002s15700	sp|Q9C8S6|Y1322_ARATH	C2 domain-containing protein At1g63220 OS=Arabidopsis thaliana GN=At1g63220 PE=1 SV=1	AT1G63220.1	| Symbols: | Calcium-dependent lipid-binding (CaLB domain) family protein | chr1:23449017-23450244 FORWARD LENGTH=147	LOC_Os04g44870.1	protein|C2 domain containing protein, putative, expressed	IMGA|Medtr1g008950.1	Elicitor-responsive protein chr1 1720563-1723469 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005737|cytoplasm
pt2_06580	A	A1S	Potri.002G155700	Potri.002G155700(AS)	POPTR_0002s15710	NA	NA	NA	NA	LOC_Os02g42730.1	protein|expressed protein	NA	NA	NA	NA	NA
pt2_06581	A	A1S	Potri.002G155700	Potri.002G155700(AS)	POPTR_0002s15710	NA	NA	NA	NA	LOC_Os02g42730.1	protein|expressed protein	NA	NA	NA	NA	NA
pt2_06582	D	D1S	Potri.002G155700	Potri.002G155700(DS)	POPTR_0002s15710	NA	NA	NA	NA	LOC_Os02g42730.1	protein|expressed protein	NA	NA	NA	NA	NA
pt2_06583	C	C1S	Potri.002G155800	Potri.002G155800(CS)	NA	NA	AT4G00585.1	| Symbols: | unknown protein; Has 47 Blast hits to 47 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 7; Plants - 33; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). | chr4:251157-252284 REVERSE LENGTH=88	LOC_Os09g38740.1	protein|expressed protein	NA	NA	GO:0006511|ubiquitin-dependent protein catabolic process GO:0009853|photorespiration GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	GO:0003674|molecular_function	GO:0005747|mitochondrial respiratory chain complex I GO:0031966|mitochondrial membrane GO:0045271|respiratory chain complex I
pt2_06584	A	A1S	Potri.002G155900	Potri.002G155900(AS)	POPTR_0002s15730	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06585	B	B1S	Potri.002G156000	Potri.002G156000(BS)	POPTR_0002s15740	sp|P37225|MAON_SOLTU	NAD-dependent malic enzyme 59 kDa isoform, mitochondrial OS=Solanum tuberosum PE=1 SV=1	AT4G00570.1	| Symbols: NAD-ME2 | NAD-dependent malic enzyme 2 | chr4:242817-246522 REVERSE LENGTH=607	LOC_Os10g35960.1	protein|NAD-dependent malic enzyme, mitochondrial precursor, putative, expressed	NA	NA	GO:0006108|malate metabolic process GO:0055114|oxidation-reduction process	GO:0004470|malic enzyme activity GO:0004471|malate dehydrogenase (decarboxylating) activity GO:0005515|protein binding GO:0005524|ATP binding GO:0008270|zinc ion binding GO:0016652|oxidoreductase activity, acting on NADH or NADPH, NAD or NADP as acceptor GO:0042803|protein homodimerization activity GO:0050897|cobalt ion binding	GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_06586	A	A3S	Potri.002G156100	Potri.002G156100(AS) Potri.001G268700(BS) Potri.002G156400(BS)	POPTR_0002s15750	sp|P80728|MAVI_CUCPE	Mavicyanin OS=Cucurbita pepo PE=1 SV=1	AT5G26330.1	| Symbols: | Cupredoxin superfamily protein | chr5:9241614-9242635 REVERSE LENGTH=187	LOC_Os03g59280.1	protein|plastocyanin-like domain containing protein, putative, expressed	IMGA|Medtr5g006040.1	Early nodulin-like protein chr5 502223-501280 F EGN_Mt100125 20111014	GO:0010413|glucuronoxylan metabolic process GO:0044036|cell wall macromolecule metabolic process GO:0045492|xylan biosynthetic process	GO:0005507|copper ion binding GO:0009055|electron carrier activity	GO:0005886|plasma membrane GO:0031225|anchored to membrane
pt2_06587	A	A2S	Potri.002G156200	Potri.002G156200(AS) Potri.002G156500(BS)	POPTR_0002s15760	NA	NA	AT3G09970.1	| Symbols: | Calcineurin-like metallo-phosphoesterase superfamily protein | chr3:3063813-3065337 FORWARD LENGTH=309	LOC_Os04g33470.1	protein|Ser/Thr protein phosphatase family protein, putative, expressed	NA	NA	NA	GO:0004722|protein serine/threonine phosphatase activity GO:0016787|hydrolase activity	GO:0005739|mitochondrion
pt2_06588	A	A3S	Potri.002G156300	Potri.002G156300(AS) Potri.002G156800(BS) Potri.002G156600(BS)	POPTR_0002s15770	sp|Q9M2E2|SDR1_ARATH	(+)-neomenthol dehydrogenase OS=Arabidopsis thaliana GN=SDR1 PE=1 SV=1	AT3G61220.1	| Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr3:22663025-22664316 FORWARD LENGTH=296	LOC_Os04g44950.1	protein|short-chain dehydrogenase/reductase, putative, expressed	IMGA|contig_52499_1.1	Carbonyl reductase contig_52499 4646-2353 H PREDN 20111014	GO:0006952|defense response GO:0008152|metabolic process GO:0009744|response to sucrose stimulus GO:0009813|flavonoid biosynthetic process GO:0010224|response to UV-B GO:0055114|oxidation-reduction process GO:0080167|response to karrikin	GO:0000166|nucleotide binding GO:0008106|alcohol dehydrogenase (NADP+) activity GO:0016491|oxidoreductase activity GO:0047501|(+)-neomenthol dehydrogenase activity GO:0047504|(-)-menthol dehydrogenase activity	GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane
pt2_06589	A	A2S	Potri.002G156500	Potri.002G156500(AS) Potri.002G156200(DS)	POPTR_0002s15790	NA	NA	AT3G09970.1	| Symbols: | Calcineurin-like metallo-phosphoesterase superfamily protein | chr3:3063813-3065337 FORWARD LENGTH=309	LOC_Os04g33470.1	protein|Ser/Thr protein phosphatase family protein, putative, expressed	NA	NA	NA	GO:0004722|protein serine/threonine phosphatase activity GO:0016787|hydrolase activity	GO:0005739|mitochondrion
pt2_06590	A	A3S	Potri.002G156600	Potri.002G156600(AS) Potri.002G156800(BS) Potri.002G156300(BS)	POPTR_0002s15800	sp|B2X050|MNR1_CAPAN	(+)-neomenthol dehydrogenase OS=Capsicum annuum GN=MNR1 PE=1 SV=1	AT3G61220.1	| Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr3:22663025-22664316 FORWARD LENGTH=296	LOC_Os04g44950.1	protein|short-chain dehydrogenase/reductase, putative, expressed	IMGA|contig_52499_1.1	Carbonyl reductase contig_52499 4646-2353 H PREDN 20111014	GO:0000038|very long-chain fatty acid metabolic process GO:0006952|defense response GO:0008152|metabolic process GO:0009409|response to cold GO:0009744|response to sucrose stimulus GO:0009813|flavonoid biosynthetic process GO:0010224|response to UV-B GO:0042335|cuticle development GO:0055114|oxidation-reduction process GO:0080167|response to karrikin	GO:0000166|nucleotide binding GO:0008106|alcohol dehydrogenase (NADP+) activity GO:0016491|oxidoreductase activity GO:0047501|(+)-neomenthol dehydrogenase activity GO:0047504|(-)-menthol dehydrogenase activity	GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane GO:0009505|plant-type cell wall
pt2_06591	A	A1S	Potri.002G156700	Potri.002G156700(AS)	POPTR_0002s15810	sp|Q9M2E2|SDR1_ARATH	(+)-neomenthol dehydrogenase OS=Arabidopsis thaliana GN=SDR1 PE=1 SV=1	AT3G61220.1	| Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr3:22663025-22664316 FORWARD LENGTH=296	LOC_Os04g44950.1	protein|short-chain dehydrogenase/reductase, putative, expressed	IMGA|contig_52499_1.1	Carbonyl reductase contig_52499 4646-2353 H PREDN 20111014	GO:0006952|defense response GO:0008152|metabolic process GO:0009744|response to sucrose stimulus GO:0009813|flavonoid biosynthetic process GO:0010224|response to UV-B GO:0055114|oxidation-reduction process GO:0080167|response to karrikin	GO:0000166|nucleotide binding GO:0008106|alcohol dehydrogenase (NADP+) activity GO:0016491|oxidoreductase activity GO:0047501|(+)-neomenthol dehydrogenase activity GO:0047504|(-)-menthol dehydrogenase activity	GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane
pt2_06592	B	B3S	Potri.002G156800	Potri.002G156800(BS) Potri.002G156600(BS) Potri.002G156300(BS)	POPTR_0002s15820	sp|Q9M2E2|SDR1_ARATH	(+)-neomenthol dehydrogenase OS=Arabidopsis thaliana GN=SDR1 PE=1 SV=1	AT3G61220.1	| Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr3:22663025-22664316 FORWARD LENGTH=296	LOC_Os04g44950.1	protein|short-chain dehydrogenase/reductase, putative, expressed	IMGA|contig_52499_1.1	Carbonyl reductase contig_52499 4646-2353 H PREDN 20111014	GO:0006952|defense response GO:0008152|metabolic process GO:0009744|response to sucrose stimulus GO:0009813|flavonoid biosynthetic process GO:0010224|response to UV-B GO:0055114|oxidation-reduction process GO:0080167|response to karrikin	GO:0000166|nucleotide binding GO:0008106|alcohol dehydrogenase (NADP+) activity GO:0016491|oxidoreductase activity GO:0047501|(+)-neomenthol dehydrogenase activity GO:0047504|(-)-menthol dehydrogenase activity	GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane
pt2_06593	A	A1S	Potri.002G156900	Potri.002G156900(AS)	POPTR_0002s15830	sp|Q9ZUT0|AB2G_ARATH	ABC transporter G family member 2 OS=Arabidopsis thaliana GN=ABCG2 PE=2 SV=1	AT2G37360.1	| Symbols: | ABC-2 type transporter family protein | chr2:15673555-15675822 REVERSE LENGTH=755	LOC_Os03g17350.1	protein|white-brown complex homolog protein, putative, expressed	IMGA|Medtr1g115790.1	ABC transporter G family member chr1 33538389-33535794 E EGN_Mt100125 20111014	GO:0006810|transport	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0016020|membrane
pt2_06594	A	A1S	Potri.002G157000	Potri.002G157000(AS)	POPTR_0002s15840	sp|Q9M2E2|SDR1_ARATH	(+)-neomenthol dehydrogenase OS=Arabidopsis thaliana GN=SDR1 PE=1 SV=1	AT3G61220.2	| Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr3:22663025-22664316 FORWARD LENGTH=303	LOC_Os04g44950.1	protein|short-chain dehydrogenase/reductase, putative, expressed	IMGA|contig_52499_1.1	Carbonyl reductase contig_52499 4646-2353 H PREDN 20111014	GO:0000038|very long-chain fatty acid metabolic process GO:0006952|defense response GO:0008152|metabolic process GO:0009409|response to cold GO:0009744|response to sucrose stimulus GO:0009813|flavonoid biosynthetic process GO:0010224|response to UV-B GO:0042335|cuticle development GO:0055114|oxidation-reduction process GO:0080167|response to karrikin	GO:0000166|nucleotide binding GO:0008106|alcohol dehydrogenase (NADP+) activity GO:0016491|oxidoreductase activity GO:0047501|(+)-neomenthol dehydrogenase activity GO:0047504|(-)-menthol dehydrogenase activity	GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane GO:0009505|plant-type cell wall
pt2_06595	A	A1S	Potri.002G157100	Potri.002G157100(AS)	POPTR_0002s15850	sp|A0LE04|FOLD_MAGSM	Bifunctional protein FolD OS=Magnetococcus sp. (strain MC-1) GN=folD PE=3 SV=1	AT4G00620.1	| Symbols: | Amino acid dehydrogenase family protein | chr4:259265-260788 REVERSE LENGTH=360	LOC_Os02g02850.1	protein|bifunctional protein folD, putative, expressed	IMGA|Medtr1g030450.1	Bifunctional protein folD chr1 8882545-8880605 E EGN_Mt100125 20111014	GO:0009396|folic acid-containing compound biosynthetic process GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0004488|methylenetetrahydrofolate dehydrogenase (NADP+) activity	GO:0009507|chloroplast
pt2_06596	B	B2S	Potri.002G157200	Potri.002G157200(BS) Potri.014G080800(DS)	POPTR_0002s15860	sp|Q9ZTZ7|KEA1_ARATH	K(+) efflux antiporter 1, chloroplastic OS=Arabidopsis thaliana GN=KEA1 PE=1 SV=2	AT1G01790.1	| Symbols: KEA1, ATKEA1 | K+ efflux antiporter 1 | chr1:284781-290869 FORWARD LENGTH=1193	LOC_Os04g58620.1	protein|potasium efflux antiporter protein, putative, expressed	IMGA|Medtr1g016450.1	Glutathione-regulated potassium-efflux system protein kefB chr1 4778242-4786339 H EGN_Mt100125 20111014	GO:0006813|potassium ion transport GO:0015992|proton transport	GO:0015079|potassium ion transmembrane transporter activity GO:0015386|potassium:hydrogen antiporter activity	GO:0009507|chloroplast GO:0009536|plastid GO:0009941|chloroplast envelope GO:0016020|membrane GO:0016021|integral to membrane
pt2_06597	A	A1S	Potri.002G157300	Potri.002G157300(AS)	POPTR_0002s15870	sp|P29675|SF3_HELAN	Pollen-specific protein SF3 OS=Helianthus annuus GN=SF3 PE=2 SV=1	AT1G01780.1	| Symbols: | GATA type zinc finger transcription factor family protein | chr1:282919-284082 FORWARD LENGTH=205	LOC_Os02g42820.1	protein|OsPLIM2a - LIM domain protein, putative actin-binding protein and transcription factor, expressed	IMGA|Medtr1g017950.1	Transcription factor lim1 chr1 5236878-5235441 F EGN_Mt100125 20111014	GO:0006944|cellular membrane fusion GO:0051017|actin filament bundle assembly	GO:0008270|zinc ion binding GO:0051015|actin filament binding	GO:0005737|cytoplasm GO:0015629|actin cytoskeleton
pt2_06598	A	A1S	Potri.002G157400	Potri.002G157400(AS)	POPTR_0002s15880	NA	NA	AT1G01770.1	| Symbols: | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1446 (InterPro:IPR010839); Has 1597 Blast hits to 1509 proteins in 306 species: Archae - 4; Bacteria - 843; Metazoa - 22; Fungi - 131; Plants - 31; Viruses - 0; Other Eukaryotes - 566 (source: NCBI BLink). | chr1:278759-282490 FORWARD LENGTH=632	LOC_Os07g27350.1	protein|atuA, putative, expressed	NA	NA	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06599	A	A1S	Potri.002G157500	Potri.002G157500(AS)	POPTR_0002s15890	sp|Q7XMK8|RH6_ORYSJ	DEAD-box ATP-dependent RNA helicase 6 OS=Oryza sativa subsp. japonica GN=Os04g0533000 PE=2 SV=1	AT4G00660.1	| Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:274638-277438 FORWARD LENGTH=505	LOC_Os04g45040.2	protein|DEAD-box ATP-dependent RNA helicase, putative, expressed	IMGA|Medtr1g012420.1	DEAD-box ATP-dependent RNA helicase chr1 2906253-2898397 F EGN_Mt100125 20111014	GO:0019048|virus-host interaction	GO:0003676|nucleic acid binding GO:0004386|helicase activity GO:0005524|ATP binding GO:0008026|ATP-dependent helicase activity	GO:0005737|cytoplasm
pt2_06600	A	A2S	Potri.002G157600	Potri.002G157600(AS) Potri.014G081200(BS)	POPTR_0002s15900	sp|Q8GWP0|MYB39_ARATH	Transcription factor MYB39 OS=Arabidopsis thaliana GN=MYB39 PE=2 SV=1	AT3G61250.1	| Symbols: AtMYB17, MYB17 | myb domain protein 17 | chr3:22671306-22672551 FORWARD LENGTH=299	LOC_Os02g42870.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr5g007370.1	Myb-like transcription factor chr5 1082481-1079977 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009751|response to salicylic acid stimulus GO:0009753|response to jasmonic acid stimulus GO:0009909|regulation of flower development GO:0048443|stamen development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_06601	A	A1S	Potri.002G157600	Potri.002G157600(AS)	POPTR_0002s15910	sp|Q8GWP0|MYB39_ARATH	Transcription factor MYB39 OS=Arabidopsis thaliana GN=MYB39 PE=2 SV=1	AT3G61250.1	| Symbols: AtMYB17, MYB17 | myb domain protein 17 | chr3:22671306-22672551 FORWARD LENGTH=299	LOC_Os02g42870.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr5g007370.1	Myb-like transcription factor chr5 1082481-1079977 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009751|response to salicylic acid stimulus GO:0009753|response to jasmonic acid stimulus GO:0009909|regulation of flower development GO:0048443|stamen development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_06602	A	A1S	Potri.002G157700	Potri.002G157700(AS)	POPTR_0002s15920	sp|Q9M2D8|Y3126_ARATH	Uncharacterized protein At3g61260 OS=Arabidopsis thaliana GN=At3g61260 PE=1 SV=1	AT3G61260.1	| Symbols: | Remorin family protein | chr3:22675403-22676701 REVERSE LENGTH=212	LOC_Os04g45070.1	protein|remorin, putative, expressed	IMGA|Medtr5g010590.1	Remorin chr5 2626563-2628359 F EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005737|cytoplasm GO:0005773|vacuole GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_06603	A	A1S	Potri.002G157800	Potri.002G157800(AS)	POPTR_0002s15930	sp|A0NDG6|RUMI_ANOGA	O-glucosyltransferase rumi homolog OS=Anopheles gambiae GN=AGAP004267 PE=3 SV=1	AT5G23850.1	| Symbols: | Arabidopsis thaliana protein of unknown function (DUF821) | chr5:8038126-8040741 FORWARD LENGTH=542	LOC_Os02g42920.1	protein|DTA2, putative, expressed	IMGA|Medtr5g010500.1	KTEL motif-containing protein chr5 2579004-2576004 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005576|extracellular region GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_06604	A	A1S	Potri.002G157900	Potri.002G157900(AS)	POPTR_0002s15940	sp|B0X1Q4|RUMI_CULQU	O-glucosyltransferase rumi homolog OS=Culex quinquefasciatus GN=CPIJ013394 PE=3 SV=1	AT5G23850.1	| Symbols: | Arabidopsis thaliana protein of unknown function (DUF821) | chr5:8038126-8040741 FORWARD LENGTH=542	LOC_Os04g45140.1	protein|DTA2, putative, expressed	IMGA|Medtr5g010500.1	KTEL motif-containing protein chr5 2579004-2576004 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005576|extracellular region GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_06605	A	A2S	Potri.002G158000	Potri.002G158000(AS) Potri.014G081700(BS)	POPTR_0002s15950	NA	NA	AT4G11610.1	| Symbols: | C2 calcium/lipid-binding plant phosphoribosyltransferase family protein | chr4:7013956-7017846 REVERSE LENGTH=1011	LOC_Os04g58720.1	protein|anthranilate phosphoribosyltransferase, putative, expressed	IMGA|Medtr5g010390.1	Glutathione peroxidase chr5 2530505-2527317 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_06606	A	A1S	Potri.002G158200	Potri.002G158200(AS)	POPTR_0002s15960	NA	NA	AT2G45850.2	| Symbols: | AT hook motif DNA-binding family protein | chr2:18871901-18873457 REVERSE LENGTH=348	LOC_Os02g57820.1	protein|AT hook motif domain containing protein, expressed	IMGA|Medtr5g010330.1	DNA-binding PD1-like protein chr5 2508875-2512497 E EGN_Mt100125 20111014	GO:0008150|biological_process GO:0010103|stomatal complex morphogenesis	GO:0003677|DNA binding	GO:0005634|nucleus
pt2_06607	A	A1S	Potri.002G158300	Potri.002G158300(AS)	POPTR_0002s15970	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_06608	A	A1S	Potri.002G158400	Potri.002G158400(AS)	POPTR_0002s15980	sp|Q9FHD7|Y5126_ARATH	Probable serine/threonine-protein kinase At5g41260 OS=Arabidopsis thaliana GN=At5g41260 PE=1 SV=1	AT4G00710.1	| Symbols: BSK3 | BR-signaling kinase 3 | chr4:290807-293096 FORWARD LENGTH=489	LOC_Os03g61010.1	protein|protein kinase family protein, putative, expressed	IMGA|Medtr5g098970.1	Receptor like protein kinase chr5 42299884-42292251 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006499|N-terminal protein myristoylation GO:0009742|brassinosteroid mediated signaling pathway	GO:0004672|protein kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane
pt2_06609	A	A1S	Potri.002G158500	Potri.002G158500(AS)	POPTR_0002s15990	NA	NA	AT1G01730.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 42 Blast hits to 42 proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa - 5; Fungi - 1; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:271002-271872 FORWARD LENGTH=224	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_06610	A	A1S	Potri.002G158600	Potri.002G158600(AS)	POPTR_0002s16000	sp|Q6H5X0|RIP2_ORYSJ	Putative ripening-related protein 2 OS=Oryza sativa subsp. japonica GN=Os02g0637000 PE=3 SV=1	NA	NA	LOC_Os02g42450.1	protein|RIPER1 - Ripening-related family protein precursor, expressed	IMGA|contig_104326_1.1	Ripening-related protein contig_104326 1319-741 H PREDN 20111014	NA	NA	NA
pt2_06611	A	A1S	Potri.002G158700	Potri.002G158700(AS)	POPTR_0002s16010	sp|Q6H5X0|RIP2_ORYSJ	Putative ripening-related protein 2 OS=Oryza sativa subsp. japonica GN=Os02g0637000 PE=3 SV=1	NA	NA	LOC_Os02g42450.1	protein|RIPER1 - Ripening-related family protein precursor, expressed	IMGA|contig_104326_1.1	Ripening-related protein contig_104326 1319-741 H PREDN 20111014	NA	NA	NA
pt2_06612	A	A1S	Potri.002G158800	Potri.002G158800(AS)	POPTR_0002s16020	sp|Q55158|RIBD_SYNY3	Riboflavin biosynthesis protein RibD OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=ribD PE=3 SV=1	AT4G20960.1	| Symbols: | Cytidine/deoxycytidylate deaminase family protein | chr4:11212077-11213530 FORWARD LENGTH=426	LOC_Os03g02600.1	protein|riboflavin biosynthesis protein ribD, putative, expressed	NA	NA	GO:0009231|riboflavin biosynthetic process GO:0055114|oxidation-reduction process	GO:0003824|catalytic activity GO:0008270|zinc ion binding GO:0008835|diaminohydroxyphosphoribosylaminopyrimidine deaminase activity GO:0016787|hydrolase activity	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_06613	A	A1S	Potri.002G158900	Potri.002G158900(AS)	POPTR_0002s16030	sp|Q54I36|PYK3_DICDI	Dual specificity protein kinase pyk3 OS=Dictyostelium discoideum GN=pyk3 PE=1 SV=1	AT1G14000.1	| Symbols: VIK | VH1-interacting kinase | chr1:4797606-4800043 FORWARD LENGTH=438	LOC_Os07g43900.1	protein|protein kinase domain containing protein, expressed	IMGA|Medtr5g091880.1	Protein kinase family protein chr5 39059541-39052109 H EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0006468|protein phosphorylation GO:0006612|protein targeting to membrane GO:0007165|signal transduction GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009605|response to external stimulus GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009734|auxin mediated signaling pathway GO:0009738|abscisic acid mediated signaling pathway GO:0009742|brassinosteroid mediated signaling pathway GO:0009753|response to jasmonic acid stimulus GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009966|regulation of signal transduction GO:0010305|leaf vascular tissue pattern formation GO:0010363|regulation of plant-type hypersensitive response GO:0030968|endoplasmic reticulum unfolded protein response GO:0031348|negative regulation of defense response GO:0035556|intracellular signal transduction GO:0042538|hyperosmotic salinity response GO:0043069|negative regulation of programmed cell death GO:0050832|defense response to fungus	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004712|protein serine/threonine/tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus
pt2_06614	A	A1S	Potri.002G159000	Potri.002G159000(AS)	POPTR_0002s16040	sp|Q05609|CTR1_ARATH	Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana GN=CTR1 PE=1 SV=1	AT4G18950.1	| Symbols: | Integrin-linked protein kinase family | chr4:10375685-10378129 FORWARD LENGTH=459	LOC_Os01g54480.3	protein|serine/threonine protein kinase, putative, expressed	IMGA|Medtr5g091880.1	Protein kinase family protein chr5 39059541-39052109 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0009966|regulation of signal transduction	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004712|protein serine/threonine/tyrosine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_06615	A	A1S	Potri.002G159100	Potri.002G159100(AS)	POPTR_0002s16050	NA	NA	AT4G00525.1	| Symbols: | unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr4:231862-232769 FORWARD LENGTH=140	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06616	A	A1S	Potri.002G159200	Potri.002G159200(AS)	POPTR_0002s16060	NA	NA	AT4G00500.2	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr4:225214-226978 REVERSE LENGTH=460	LOC_Os06g14490.2	protein|calmodulin-binding heat-shock protein, putative, expressed	NA	NA	GO:0006629|lipid metabolic process GO:0016042|lipid catabolic process	GO:0004091|carboxylesterase activity GO:0004806|triglyceride lipase activity GO:0005516|calmodulin binding	GO:0005886|plasma membrane
pt2_06617	A	A1S	Potri.002G159300	Potri.002G159300(AS)	POPTR_0002s16070	sp|O80831|BAM7_ARATH	Beta-amylase 7 OS=Arabidopsis thaliana GN=BAM7 PE=2 SV=2	AT2G45880.1	| Symbols: BMY4, BAM7 | beta-amylase 7 | chr2:18878674-18881824 REVERSE LENGTH=691	LOC_Os09g39570.1	protein|beta-amylase, putative, expressed	IMGA|Medtr5g026210.1	Beta-amylase chr5 10516335-10509636 F EGN_Mt100125 20111014	GO:0000023|maltose metabolic process GO:0000272|polysaccharide catabolic process GO:0005975|carbohydrate metabolic process GO:0010048|vernalization response GO:0019252|starch biosynthetic process GO:0048831|regulation of shoot development	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0003824|catalytic activity GO:0016161|beta-amylase activity GO:0043169|cation binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_06618	A	A1S	Potri.002G159300	Potri.002G159300(AS)	POPTR_0002s16070	sp|O80831|BAM7_ARATH	Beta-amylase 7 OS=Arabidopsis thaliana GN=BAM7 PE=2 SV=2	AT2G45880.1	| Symbols: BMY4, BAM7 | beta-amylase 7 | chr2:18878674-18881824 REVERSE LENGTH=691	LOC_Os09g39570.1	protein|beta-amylase, putative, expressed	IMGA|Medtr5g026210.1	Beta-amylase chr5 10516335-10509636 F EGN_Mt100125 20111014	GO:0000023|maltose metabolic process GO:0000272|polysaccharide catabolic process GO:0005975|carbohydrate metabolic process GO:0010048|vernalization response GO:0019252|starch biosynthetic process GO:0048831|regulation of shoot development	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0003824|catalytic activity GO:0016161|beta-amylase activity GO:0043169|cation binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_06619	A	A2S	Potri.002G159400	Potri.002G159400(AS) Potri.014G083900(DS)	POPTR_0002s16080	sp|Q9FN69|GL3_ARATH	Transcription factor GLABRA 3 OS=Arabidopsis thaliana GN=GL3 PE=1 SV=1	AT5G41315.1	| Symbols: GL3, MYC6.2 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr5:16529457-16532866 FORWARD LENGTH=637	LOC_Os04g47040.1	protein|anthocyanin regulatory Lc protein, putative, expressed	IMGA|Medtr1g072320.1	Transcription factor TT8 chr1 18090629-18083194 H EGN_Mt100125 20111014	GO:0001708|cell fate specification GO:0009957|epidermal cell fate specification GO:0010091|trichome branching	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_06620	A	A1S	Potri.002G159500	Potri.002G159500(AS)	POPTR_0002s16090	sp|O04705|GAO1D_WHEAT	Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN=GA20ox1D PE=1 SV=1	AT4G23340.1	| Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr4:12195719-12196793 REVERSE LENGTH=324	LOC_Os07g01340.1	protein|gibberellin 2-beta-dioxygenase 7, putative, expressed	IMGA|Medtr5g005570.1	Gibberellin 2-beta-dioxygenase chr5 271078-268212 H EGN_Mt100125 20111014	GO:0008152|metabolic process GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_06621	A	A1S	Potri.002G159700	Potri.002G159700(AS)	POPTR_0002s16100	sp|Q9LQ89|ROGF2_ARATH	Rop guanine nucleotide exchange factor 2 OS=Arabidopsis thaliana GN=ROPGEF2 PE=1 SV=2	AT4G00460.2	| Symbols: ATROPGEF3, ROPGEF3 | RHO guanyl-nucleotide exchange factor 3 | chr4:211146-213094 REVERSE LENGTH=473	LOC_Os10g40270.1	protein|ATROPGEF7/ROPGEF7, putative, expressed	IMGA|Medtr5g081410.1	Rop guanine nucleotide exchange factor chr5 33853946-33849635 E EGN_Mt100125 20111014	NA	GO:0005089|Rho guanyl-nucleotide exchange factor activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06622	A	A2S	Potri.002G159800	Potri.002G159800(AS) Potri.014G084300(DS)	POPTR_0002s16110	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06623	A	A1S	Potri.002G159900	Potri.002G159900(AS)	POPTR_0002s16120	sp|H3K2Y6|MED12_ARATH	Mediator of RNA polymerase II transcription subunit 12 OS=Arabidopsis thaliana GN=MED12 PE=1 SV=1	AT4G00450.1	| Symbols: CRP, CCT | RNA polymerase II transcription mediators | chr4:202425-210666 FORWARD LENGTH=2253	LOC_Os07g45400.1	protein|expressed protein	NA	NA	GO:0006357|regulation of transcription from RNA polymerase II promoter GO:0006487|protein N-linked glycosylation GO:0040034|regulation of development, heterochronic GO:0048573|photoperiodism, flowering GO:0090213|regulation of radial pattern formation	GO:0001104|RNA polymerase II transcription cofactor activity	GO:0005634|nucleus GO:0016592|mediator complex
pt2_06624	A	A1S	Potri.002G160000	Potri.002G160000(AS)	POPTR_0002s16130	NA	NA	AT4G00440.3	| Symbols: | Protein of unknown function (DUF3741) | chr4:195176-198221 FORWARD LENGTH=832	LOC_Os04g47180.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_06625	A	A1S	Potri.002G160100	Potri.002G160100(AS)	POPTR_0002s16140	sp|Q75RY2|PAIR1_ORYSJ	Protein PAIR1 OS=Oryza sativa subsp. japonica GN=PAIR1 PE=2 SV=1	AT1G01690.1	| Symbols: ATPRD3, PRD3 | putative recombination initiation defects 3 | chr1:249242-252221 FORWARD LENGTH=449	LOC_Os03g01590.2	protein|PAIR1, putative, expressed	NA	NA	GO:0009553|embryo sac development GO:0009555|pollen development GO:0042138|meiotic DNA double-strand break formation GO:0051026|chiasma assembly	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_06626	A	A1S	Potri.002G160100	Potri.002G160100(AS)	POPTR_0002s16140	sp|Q75RY2|PAIR1_ORYSJ	Protein PAIR1 OS=Oryza sativa subsp. japonica GN=PAIR1 PE=2 SV=1	AT1G01690.1	| Symbols: ATPRD3, PRD3 | putative recombination initiation defects 3 | chr1:249242-252221 FORWARD LENGTH=449	LOC_Os03g01590.2	protein|PAIR1, putative, expressed	NA	NA	GO:0009553|embryo sac development GO:0009555|pollen development GO:0042138|meiotic DNA double-strand break formation GO:0051026|chiasma assembly	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_06627	A	A1S	Potri.002G160200	Potri.002G160200(AS)	POPTR_0002s16150	sp|Q8GUH1|PUB33_ARATH	U-box domain-containing protein 33 OS=Arabidopsis thaliana GN=PUB33 PE=2 SV=2	AT2G45910.1	| Symbols: | U-box domain-containing protein kinase family protein | chr2:18894520-18898212 FORWARD LENGTH=834	LOC_Os10g40100.1	protein|protein kinase, putative, expressed	IMGA|Medtr1g100820.1	U-box domain-containing protein chr1 29460239-29454831 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006950|response to stress GO:0016567|protein ubiquitination	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004842|ubiquitin-protein ligase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0000151|ubiquitin ligase complex GO:0005886|plasma membrane
pt2_06628	A	A1S	Potri.002G160300	Potri.002G160300(AS)	POPTR_0002s16160	sp|Q8GUH1|PUB33_ARATH	U-box domain-containing protein 33 OS=Arabidopsis thaliana GN=PUB33 PE=2 SV=2	AT2G45910.1	| Symbols: | U-box domain-containing protein kinase family protein | chr2:18894520-18898212 FORWARD LENGTH=834	LOC_Os09g39640.1	protein|protein kinase, putative, expressed	IMGA|Medtr1g100820.1	U-box domain-containing protein chr1 29460239-29454831 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006950|response to stress GO:0016567|protein ubiquitination	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004842|ubiquitin-protein ligase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0000151|ubiquitin ligase complex GO:0005886|plasma membrane
pt2_06629	B	B1S	Potri.002G160400	Potri.002G160400(BS)	POPTR_0002s16170	NA	NA	AT1G49920.1	| Symbols: | MuDR family transposase | chr1:18481798-18484233 REVERSE LENGTH=785	LOC_Os02g45510.1	protein|transposon protein, putative, unclassified, expressed	NA	NA	GO:0008150|biological_process	GO:0008270|zinc ion binding	GO:0005575|cellular_component
pt2_06630	A	A1S	Potri.002G160500	Potri.002G160500(AS)	POPTR_0002s16180	sp|Q5PQL3|SPP2B_RAT	Signal peptide peptidase-like 2B OS=Rattus norvegicus GN=Sppl2b PE=2 SV=1	AT1G01650.1	| Symbols: SPPL4, ATSPPL4 | SIGNAL PEPTIDE PEPTIDASE-LIKE 4 | chr1:233188-237647 REVERSE LENGTH=540	LOC_Os06g51430.1	protein|signal peptide peptidase-like 2B, putative, expressed	IMGA|Medtr1g100980.1	Signal peptide peptidase-like protein chr1 29553413-29549208 E EGN_Mt100125 20111014	GO:0006508|proteolysis	GO:0004190|aspartic-type endopeptidase activity GO:0008233|peptidase activity	GO:0005886|plasma membrane GO:0016021|integral to membrane
pt2_06631	A	A1S	Potri.002G160600	Potri.002G160600(AS)	POPTR_0002s16190	sp|Q8LF97|ASK21_ARATH	SKP1-like protein 21 OS=Arabidopsis thaliana GN=ASK21 PE=2 SV=1	AT3G61415.2	| Symbols: ASK21, SK21 | SKP1-like 21 | chr3:22723052-22725577 REVERSE LENGTH=349	LOC_Os03g01660.1	protein|SKP1, putative, expressed	IMGA|contig_59120_1.1	S-phase kinase associated protein 1-like protein contig_59120 4595-600 E PREDN 20111014	GO:0006511|ubiquitin-dependent protein catabolic process	GO:0004842|ubiquitin-protein ligase activity	GO:0005634|nucleus GO:0019005|SCF ubiquitin ligase complex
pt2_06632	R	R	NA	NA	POPTR_0002s16200	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06633	A	A1S	Potri.002G160700	Potri.002G160700(AS)	POPTR_0002s16210	NA	NA	AT4G00355.2	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G45980.1); Has 100 Blast hits to 97 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:155207-156090 FORWARD LENGTH=266	LOC_Os02g57600.1	protein|expressed protein	NA	NA	GO:0006499|N-terminal protein myristoylation GO:0006891|intra-Golgi vesicle-mediated transport GO:0008150|biological_process	GO:0005515|protein binding	GO:0005634|nucleus GO:0005783|endoplasmic reticulum GO:0043231|intracellular membrane-bounded organelle
pt2_06634	A	A1S	Potri.002G160800	Potri.002G160800(AS)	POPTR_0002s16220	sp|O81155|CYSKP_SOLTU	Cysteine synthase, chloroplastic/chromoplastic OS=Solanum tuberosum PE=2 SV=1	AT3G61440.1	| Symbols: ATCYSC1, ARATH;BSAS3;1, CYSC1 | cysteine synthase C1 | chr3:22735885-22737792 FORWARD LENGTH=368	LOC_Os04g08350.2	protein|cysteine synthase, chloroplast/chromoplast precursor, putative, expressed	IMGA|Medtr1g081610.1	Cysteine synthase chr1 20835123-20838627 F EGN_Mt100125 20111014	GO:0006096|glycolysis GO:0006535|cysteine biosynthetic process from serine GO:0006833|water transport GO:0006972|hyperosmotic response GO:0007030|Golgi organization GO:0008152|metabolic process GO:0009266|response to temperature stimulus GO:0009651|response to salt stress GO:0009684|indoleacetic acid biosynthetic process GO:0009750|response to fructose stimulus GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019344|cysteine biosynthetic process GO:0019499|cyanide metabolic process GO:0019500|cyanide catabolic process GO:0019761|glucosinolate biosynthetic process GO:0032880|regulation of protein localization GO:0042744|hydrogen peroxide catabolic process GO:0046686|response to cadmium ion GO:0051410|detoxification of nitrogen compound GO:0080147|root hair cell development	GO:0003824|catalytic activity GO:0004124|cysteine synthase activity GO:0005507|copper ion binding GO:0030170|pyridoxal phosphate binding GO:0050017|L-3-cyanoalanine synthase activity	GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_06635	A	A1S	Potri.002G160800	Potri.002G160800(AS)	POPTR_0002s16220	sp|O81155|CYSKP_SOLTU	Cysteine synthase, chloroplastic/chromoplastic OS=Solanum tuberosum PE=2 SV=1	AT3G61440.1	| Symbols: ATCYSC1, ARATH;BSAS3;1, CYSC1 | cysteine synthase C1 | chr3:22735885-22737792 FORWARD LENGTH=368	LOC_Os04g08350.2	protein|cysteine synthase, chloroplast/chromoplast precursor, putative, expressed	IMGA|Medtr1g081610.1	Cysteine synthase chr1 20835123-20838627 F EGN_Mt100125 20111014	GO:0006096|glycolysis GO:0006535|cysteine biosynthetic process from serine GO:0006833|water transport GO:0006972|hyperosmotic response GO:0007030|Golgi organization GO:0008152|metabolic process GO:0009266|response to temperature stimulus GO:0009651|response to salt stress GO:0009684|indoleacetic acid biosynthetic process GO:0009750|response to fructose stimulus GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019344|cysteine biosynthetic process GO:0019499|cyanide metabolic process GO:0019500|cyanide catabolic process GO:0019761|glucosinolate biosynthetic process GO:0032880|regulation of protein localization GO:0042744|hydrogen peroxide catabolic process GO:0046686|response to cadmium ion GO:0051410|detoxification of nitrogen compound GO:0080147|root hair cell development	GO:0003824|catalytic activity GO:0004124|cysteine synthase activity GO:0005507|copper ion binding GO:0030170|pyridoxal phosphate binding GO:0050017|L-3-cyanoalanine synthase activity	GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_06636	A	A1S	Potri.002G160800	Potri.002G160800(AS)	POPTR_0002s16220	sp|O81155|CYSKP_SOLTU	Cysteine synthase, chloroplastic/chromoplastic OS=Solanum tuberosum PE=2 SV=1	AT3G61440.1	| Symbols: ATCYSC1, ARATH;BSAS3;1, CYSC1 | cysteine synthase C1 | chr3:22735885-22737792 FORWARD LENGTH=368	LOC_Os04g08350.2	protein|cysteine synthase, chloroplast/chromoplast precursor, putative, expressed	IMGA|Medtr1g081610.1	Cysteine synthase chr1 20835123-20838627 F EGN_Mt100125 20111014	GO:0006096|glycolysis GO:0006535|cysteine biosynthetic process from serine GO:0006833|water transport GO:0006972|hyperosmotic response GO:0007030|Golgi organization GO:0008152|metabolic process GO:0009266|response to temperature stimulus GO:0009651|response to salt stress GO:0009684|indoleacetic acid biosynthetic process GO:0009750|response to fructose stimulus GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019344|cysteine biosynthetic process GO:0019499|cyanide metabolic process GO:0019500|cyanide catabolic process GO:0019761|glucosinolate biosynthetic process GO:0032880|regulation of protein localization GO:0042744|hydrogen peroxide catabolic process GO:0046686|response to cadmium ion GO:0051410|detoxification of nitrogen compound GO:0080147|root hair cell development	GO:0003824|catalytic activity GO:0004124|cysteine synthase activity GO:0005507|copper ion binding GO:0030170|pyridoxal phosphate binding GO:0050017|L-3-cyanoalanine synthase activity	GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_06637	A	A1S	Potri.002G160900	Potri.002G160900(AS)	POPTR_0002s16230	sp|Q6EVK6|BRM_ARATH	ATP-dependent helicase BRM OS=Arabidopsis thaliana GN=BRM PE=1 SV=1	AT2G46020.2	| Symbols: CHR2, ATBRM, BRM, CHA2 | transcription regulatory protein SNF2, putative | chr2:18923304-18931769 FORWARD LENGTH=2193	LOC_Os02g02290.1	protein|SNF2 family N-terminal domain containing protein, expressed	IMGA|Medtr5g005840.1	Chromatin remodeling complex subunit chr5 407817-415760 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0010199|organ boundary specification between lateral organs and the meristem GO:0040029|regulation of gene expression, epigenetic GO:0043044|ATP-dependent chromatin remodeling	GO:0003676|nucleic acid binding GO:0003677|DNA binding GO:0004386|helicase activity GO:0005524|ATP binding GO:0016818|hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	GO:0005634|nucleus GO:0005829|cytosol GO:0016585|chromatin remodeling complex
pt2_06638	A	A1S	Potri.002G161000	Potri.002G161000(AS)	POPTR_0002s16240	sp|P42749|UBC5_ARATH	Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana GN=UBC5 PE=2 SV=2	AT1G63800.1	| Symbols: UBC5 | ubiquitin-conjugating enzyme 5 | chr1:23667888-23669003 REVERSE LENGTH=185	LOC_Os10g31000.1	protein|ubiquitin-conjugating enzyme, putative, expressed	IMGA|Medtr5g075580.1	Ubiquitin carrier protein chr5 31157779-31152864 E EGN_Mt100125 20111014	GO:0006511|ubiquitin-dependent protein catabolic process	GO:0004842|ubiquitin-protein ligase activity GO:0016881|acid-amino acid ligase activity	GO:0005634|nucleus GO:0005829|cytosol
pt2_06639	A	A1S	Potri.002G161100	Potri.002G161100(AS)	POPTR_0002s16250	sp|Q84JT7|ARID1_ARATH	AT-rich interactive domain-containing protein 1 OS=Arabidopsis thaliana GN=ARID1 PE=2 SV=1	AT2G46040.1	| Symbols: | ARID/BRIGHT DNA-binding domain;ELM2 domain protein | chr2:18935684-18937807 REVERSE LENGTH=562	LOC_Os04g08410.1	protein|ELM2 domain containing protein, putative, expressed	IMGA|contig_55942_1.1	ARID/BRIGHT DNA-binding domain-containing protein contig_55942 4683-1604 H PREDN 20111014	GO:0008150|biological_process	GO:0003677|DNA binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_06640	A	A1S	Potri.002G161200	Potri.002G161200(AS)	POPTR_0002s16260	sp|Q9LYT3|TT12_ARATH	Protein TRANSPARENT TESTA 12 OS=Arabidopsis thaliana GN=TT12 PE=2 SV=1	AT4G00350.1	| Symbols: | MATE efflux family protein | chr4:151978-153988 FORWARD LENGTH=542	LOC_Os08g44870.1	protein|MATE efflux family protein, putative, expressed	IMGA|Medtr1g100180.1	Protein TRANSPARENT TESTA chr1 29162897-29166452 H EGN_Mt100125 20111014	GO:0006855|drug transmembrane transport GO:0009860|pollen tube growth GO:0055085|transmembrane transport	GO:0005215|transporter activity GO:0015238|drug transmembrane transporter activity GO:0015297|antiporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_06641	A	A1S	Potri.002G161300	Potri.002G161300(AS)	POPTR_0002s16270	sp|P80728|MAVI_CUCPE	Mavicyanin OS=Cucurbita pepo PE=1 SV=1	AT5G26330.1	| Symbols: | Cupredoxin superfamily protein | chr5:9241614-9242635 REVERSE LENGTH=187	LOC_Os03g59280.1	protein|plastocyanin-like domain containing protein, putative, expressed	IMGA|Medtr5g006040.1	Early nodulin-like protein chr5 502223-501280 F EGN_Mt100125 20111014	GO:0010413|glucuronoxylan metabolic process GO:0044036|cell wall macromolecule metabolic process GO:0045492|xylan biosynthetic process	GO:0005507|copper ion binding GO:0009055|electron carrier activity	GO:0005886|plasma membrane GO:0031225|anchored to membrane
pt2_06642	A	A1S	Potri.002G161400	Potri.002G161400(AS)	POPTR_0002s16280	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06643	G	G1	NA	NA	POPTR_0002s16290	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06644	A	A1S	Potri.002G161500	Potri.002G161500(AS)	POPTR_0002s16300	sp|Q8LE94|RING3_ARATH	E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana GN=At3g02290 PE=2 SV=1	AT4G00335.2	| Symbols: RHB1A | RING-H2 finger B1A | chr4:146866-147962 FORWARD LENGTH=190	LOC_Os11g18947.1	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr5g046970.1	E3 ubiquitin-protein ligase chr5 20175519-20174021 I EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0048573|photoperiodism, flowering	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_06645	A	A1S	Potri.002G161600	Potri.002G161600(AS)	POPTR_0002s16310	sp|Q8VZJ9|Y4330_ARATH	Probable leucine-rich repeat receptor-like protein kinase At4g00330 OS=Arabidopsis thaliana GN=At4g00330 PE=2 SV=1	AT4G00330.1	| Symbols: CRCK2 | calmodulin-binding receptor-like cytoplasmic kinase 2 | chr4:142787-144427 REVERSE LENGTH=411	LOC_Os03g05470.1	protein|tyrosine protein kinase domain containing protein, putative, expressed	IMGA|Medtr5g069600.1	Nodulation receptor kinase chr5 28526282-28522626 F EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0009555|pollen development	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus
pt2_06646	A	A1S	Potri.002G161700	Potri.002G161700(AS)	POPTR_0002s16320	NA	NA	NA	NA	NA	NA	NA	NA	GO:0009561|megagametogenesis GO:0009640|photomorphogenesis GO:0009737|response to abscisic acid stimulus GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009909|regulation of flower development GO:0009933|meristem structural organization GO:0010162|seed dormancy process GO:0010182|sugar mediated signaling pathway GO:0010228|vegetative to reproductive phase transition of meristem GO:0010564|regulation of cell cycle process GO:0016567|protein ubiquitination GO:0019915|lipid storage GO:0048366|leaf development GO:0048825|cotyledon development GO:0050826|response to freezing	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06647	C	C1S	Potri.002G161800	Potri.002G161800(CS)	NA	NA	AT4G23470.3	| Symbols: | PLAC8 family protein | chr4:12249289-12251079 FORWARD LENGTH=233	LOC_Os10g39100.1	protein|uncharacterized Cys-rich domain containing protein, putative, expressed	NA	NA	GO:0006970|response to osmotic stress GO:0009697|salicylic acid biosynthetic process GO:0009863|salicylic acid mediated signaling pathway GO:0010167|response to nitrate GO:0015706|nitrate transport GO:0031348|negative regulation of defense response GO:0045087|innate immune response GO:0046686|response to cadmium ion GO:0048767|root hair elongation	NA	GO:0005634|nucleus
pt2_06648	A	A1S	Potri.002G161900	Potri.002G161900(AS)	POPTR_0002s16340	sp|Q9SUS5|RHA1B_ARATH	E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis thaliana GN=RHA1B PE=2 SV=1	AT3G61460.1	| Symbols: BRH1 | brassinosteroid-responsive RING-H2 | chr3:22741701-22742213 REVERSE LENGTH=170	LOC_Os04g49000.1	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr5g010100.1	RING zinc finger protein-like protein chr5 2395799-2396606 F EGN_Mt100125 20111014	GO:0009741|response to brassinosteroid stimulus GO:0010200|response to chitin GO:0030003|cellular cation homeostasis GO:0070838|divalent metal ion transport	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_06649	A	A1S	Potri.002G162000	Potri.002G162000(AS)	POPTR_0002s16350	sp|Q69ZJ7|RIC1_MOUSE	Protein RIC1 homolog OS=Mus musculus GN=Kiaa1432 PE=2 SV=2	AT5G28350.1	| Symbols: | Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor | chr5:10320301-10326781 FORWARD LENGTH=1127	LOC_Os02g54500.1	protein|WD40-like, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005794|Golgi apparatus GO:0009507|chloroplast
pt2_06650	A	A1S	Potri.002G162100	Potri.002G162100(AS)	POPTR_0002s16360	sp|Q8VZL4|MSL1_ARATH	Mechanosensitive ion channel protein 1, mitochondrial OS=Arabidopsis thaliana GN=MSL1 PE=2 SV=1	AT4G00290.1	| Symbols: | Mechanosensitive ion channel protein | chr4:123097-125300 REVERSE LENGTH=497	LOC_Os04g48940.3	protein|uncharacterized mscS family protein, putative, expressed	NA	NA	GO:0055085|transmembrane transport	NA	GO:0005739|mitochondrion GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009941|chloroplast envelope GO:0016020|membrane
pt2_06651	A	A1S	Potri.002G162200	Potri.002G162200(AS)	POPTR_0002s16370	sp|Q66PF2|URT1_FRAAN	Putative UDP-rhamnose:rhamnosyltransferase 1 OS=Fragaria ananassa GN=GT4 PE=2 SV=1	AT5G49690.1	| Symbols: | UDP-Glycosyltransferase superfamily protein | chr5:20189968-20191350 REVERSE LENGTH=460	LOC_Os03g59030.1	protein|UDP-rhamnose rhamnosyltransferase, putative, expressed	IMGA|Medtr5g066410.1	Anthocyanidin 3-O-glucosyltransferase chr5 27021858-27020462 H EGN_Mt100125 20111014	GO:0006914|autophagy GO:0008152|metabolic process	GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups	GO:0005576|extracellular region GO:0005829|cytosol
pt2_06652	A	A1S	Potri.002G162300	Potri.002G162300(AS)	POPTR_0002s16380	sp|Q66PF2|URT1_FRAAN	Putative UDP-rhamnose:rhamnosyltransferase 1 OS=Fragaria ananassa GN=GT4 PE=2 SV=1	AT2G22590.1	| Symbols: | UDP-Glycosyltransferase superfamily protein | chr2:9593012-9594424 FORWARD LENGTH=470	LOC_Os01g64540.1	protein|anthocyanidin 3-O-glucosyltransferase, putative, expressed	IMGA|Medtr5g066410.1	Anthocyanidin 3-O-glucosyltransferase chr5 27021858-27020462 H EGN_Mt100125 20111014	GO:0008152|metabolic process	GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups	GO:0005575|cellular_component
pt2_06653	A	A1S	Potri.002G162400	Potri.002G162400(AS)	POPTR_0002s16390	sp|A7PZL3|PGLR_VITVI	Probable polygalacturonase OS=Vitis vinifera GN=GSVIVT00026920001 PE=1 SV=1	AT3G61490.3	| Symbols: | Pectin lyase-like superfamily protein | chr3:22758439-22760137 FORWARD LENGTH=476	LOC_Os03g03350.1	protein|polygalacturonase, putative, expressed	IMGA|Medtr1g100060.1	hypothetical protein chr1 29104014-29100579 H EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0004650|polygalacturonase activity	NA
pt2_06654	A	A2S	Potri.002G162500	Potri.002G162500(AS) Potri.014G088500(DS)	POPTR_0002s16400	sp|Q40353|MMK2_MEDSA	Mitogen-activated protein kinase homolog MMK2 OS=Medicago sativa GN=MMK2 PE=2 SV=1	AT4G01370.1	| Symbols: ATMPK4, MPK4 | MAP kinase 4 | chr4:567219-568889 FORWARD LENGTH=376	LOC_Os10g38950.1	protein|CGMC_MAPKCMGC_2_ERK.14 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	IMGA|Medtr5g010030.1	Mitogen-activated protein kinase chr5 2369912-2371946 F EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0002831|regulation of response to biotic stimulus GO:0006096|glycolysis GO:0006355|regulation of transcription, DNA-dependent GO:0006468|protein phosphorylation GO:0006612|protein targeting to membrane GO:0006833|water transport GO:0006950|response to stress GO:0006970|response to osmotic stress GO:0006972|hyperosmotic response GO:0007030|Golgi organization GO:0007112|male meiosis cytokinesis GO:0007165|signal transduction GO:0009266|response to temperature stimulus GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009555|pollen development GO:0009595|detection of biotic stimulus GO:0009605|response to external stimulus GO:0009607|response to biotic stimulus GO:0009611|response to wounding GO:0009617|response to bacterium GO:0009620|response to fungus GO:0009651|response to salt stress GO:0009697|salicylic acid biosynthetic process GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009753|response to jasmonic acid stimulus GO:0009861|jasmonic acid and ethylene-dependent systemic resistance GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009868|jasmonic acid and ethylene-dependent systemic resistance, jasmonic acid mediated signaling pathway GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0010374|stomatal complex development GO:0016310|phosphorylation GO:0030968|endoplasmic reticulum unfolded protein response GO:0031348|negative regulation of defense response GO:0035304|regulation of protein dephosphorylation GO:0035556|intracellular signal transduction GO:0042538|hyperosmotic salinity response GO:0042539|hypotonic salinity response GO:0042742|defense response to bacterium GO:0043069|negative regulation of programmed cell death GO:0043622|cortical microtubule organization GO:0043900|regulation of multi-organism process GO:0045088|regulation of innate immune response GO:0046686|response to cadmium ion GO:0048481|ovule development GO:0050832|defense response to fungus GO:0051707|response to other organism	GO:0004672|protein kinase activity GO:0004707|MAP kinase activity GO:0005515|protein binding GO:0016301|kinase activity	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol
pt2_06655	A	A1S	Potri.002G162600	Potri.002G162600(AS)	POPTR_0002s16410	sp|Q9LMM6|BPS1_ARATH	Protein BPS1, chloroplastic OS=Arabidopsis thaliana GN=BPS1 PE=2 SV=1	AT2G46080.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF793) (TAIR:AT1G01550.2); Has 153 Blast hits to 139 proteins in 20 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 150; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:18948317-18949360 REVERSE LENGTH=347	LOC_Os10g36950.1	protein|DUF677 domain containing protein, putative, expressed	NA	NA	GO:0009790|embryo development	NA	GO:0009507|chloroplast
pt2_06656	A	A1S	Potri.002G162700	Potri.002G162700(AS)	POPTR_0002s16420	sp|Q8RX88|FACE1_ARATH	CAAX prenyl protease 1 homolog OS=Arabidopsis thaliana GN=FACE1 PE=1 SV=1	AT4G01320.1	| Symbols: ATSTE24, STE24 | Peptidase family M48 family protein | chr4:545905-549002 FORWARD LENGTH=424	LOC_Os02g45650.1	protein|peptidase, putative, expressed	NA	NA	GO:0006508|proteolysis GO:0006888|ER to Golgi vesicle-mediated transport GO:0051604|protein maturation GO:0080120|CAAX-box protein maturation	GO:0004175|endopeptidase activity GO:0004222|metalloendopeptidase activity	GO:0005773|vacuole GO:0005783|endoplasmic reticulum
pt2_06657	A	A1S	Potri.002G162800	Potri.002G162800(AS)	POPTR_0002s16430	NA	NA	AT2G46100.1	| Symbols: | Nuclear transport factor 2 (NTF2) family protein | chr2:18953326-18954467 FORWARD LENGTH=240	LOC_Os07g10495.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_06658	A	A1S	Potri.002G162900	Potri.002G162900(AS)	POPTR_0002s16440	sp|O53526|DAGK_MYCTU	Diacylglycerol kinase OS=Mycobacterium tuberculosis GN=dagK PE=1 SV=1	AT2G46090.1	| Symbols: | Diacylglycerol kinase family protein | chr2:18950919-18953079 FORWARD LENGTH=364	LOC_Os03g03400.1	protein|diacylglycerol kinase, putative, expressed	NA	NA	GO:0006671|phytosphingosine metabolic process GO:0007205|protein kinase C-activating G-protein coupled receptor signaling pathway GO:0009409|response to cold	GO:0004143|diacylglycerol kinase activity GO:0017050|D-erythro-sphingosine kinase activity	GO:0005737|cytoplasm GO:0005739|mitochondrion
pt2_06659	A	A1S	Potri.002G163000	Potri.002G163000(AS)	POPTR_0002s16450	NA	NA	AT4G01290.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 1797 Blast hits to 1352 proteins in 216 species: Archae - 0; Bacteria - 202; Metazoa - 850; Fungi - 267; Plants - 109; Viruses - 0; Other Eukaryotes - 369 (source: NCBI BLink). | chr4:538213-543282 REVERSE LENGTH=990	LOC_Os06g01680.3	protein|expressed protein	NA	NA	GO:0007155|cell adhesion GO:0008150|biological_process GO:0010090|trichome morphogenesis GO:0045010|actin nucleation GO:0048765|root hair cell differentiation GO:0071555|cell wall organization	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_06660	A	A1S	Potri.002G163100	Potri.002G163100(AS)	POPTR_0002s16460	sp|Q6R0H0|ASG4_ARATH	Transcription factor ASG4 OS=Arabidopsis thaliana GN=ASG4 PE=2 SV=1	AT4G01280.2	| Symbols: | Homeodomain-like superfamily protein | chr4:535288-536854 FORWARD LENGTH=303	LOC_Os02g45670.1	protein|myb-like DNA-binding domain containing protein, expressed	IMGA|Medtr5g076960.1	MYB transcription factor chr5 31832533-31829305 F EGN_Mt100125 20111014	GO:0000303|response to superoxide GO:0006355|regulation of transcription, DNA-dependent GO:0009651|response to salt stress GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009736|cytokinin mediated signaling pathway GO:0009737|response to abscisic acid stimulus GO:0009739|response to gibberellin stimulus GO:0009751|response to salicylic acid stimulus GO:0009753|response to jasmonic acid stimulus GO:0009873|ethylene mediated signaling pathway GO:0046686|response to cadmium ion GO:0048573|photoperiodism, flowering	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_06661	A	A1S	Potri.002G163200	Potri.002G163200(AS)	POPTR_0002s16470	sp|O23702|CTBP_ARATH	C-terminal binding protein AN OS=Arabidopsis thaliana GN=AN PE=1 SV=1	AT1G01510.1	| Symbols: AN | NAD(P)-binding Rossmann-fold superfamily protein | chr1:187235-189836 FORWARD LENGTH=636	LOC_Os10g38900.1	protein|erythronate-4-phosphate dehydrogenase, putative, expressed	NA	NA	GO:0000226|microtubule cytoskeleton organization GO:0006342|chromatin silencing GO:0007155|cell adhesion GO:0008360|regulation of cell shape GO:0009965|leaf morphogenesis GO:0010090|trichome morphogenesis GO:0010091|trichome branching GO:0010482|regulation of epidermal cell division GO:0016572|histone phosphorylation GO:0031129|inductive cell-cell signaling GO:0042814|monopolar cell growth GO:0045010|actin nucleation GO:0045604|regulation of epidermal cell differentiation GO:0048444|floral organ morphogenesis GO:0048530|fruit morphogenesis GO:0051225|spindle assembly GO:0051567|histone H3-K9 methylation GO:0055114|oxidation-reduction process GO:2000039|regulation of trichome morphogenesis	GO:0000166|nucleotide binding GO:0005515|protein binding GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0042802|identical protein binding GO:0042803|protein homodimerization activity GO:0048037|cofactor binding	GO:0005829|cytosol
pt2_06662	B	B1S	Potri.002G163300	Potri.002G163300(BS)	POPTR_0002s16490	sp|Q8GUH2|Y1015_ARATH	Uncharacterized protein At1g01500 OS=Arabidopsis thaliana GN=At1g01500 PE=2 SV=1	AT1G01500.1	| Symbols: | Erythronate-4-phosphate dehydrogenase family protein | chr1:185260-186573 FORWARD LENGTH=327	LOC_Os03g56420.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_06663	A	A1S	Potri.002G163400	Potri.002G163400(AS)	POPTR_0002s16500	NA	NA	AT1G01490.2	| Symbols: | Heavy metal transport/detoxification superfamily protein | chr1:180401-182066 REVERSE LENGTH=177	LOC_Os03g03500.1	protein|heavy metal-associated domain containing protein, expressed	IMGA|Medtr1g099800.1	hypothetical protein chr1 28995539-28994338 F EGN_Mt100125 20111014	GO:0030001|metal ion transport	GO:0046872|metal ion binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06664	A	A1S	Potri.002G163400	Potri.002G163400(AS)	POPTR_0002s16500	NA	NA	AT1G01490.2	| Symbols: | Heavy metal transport/detoxification superfamily protein | chr1:180401-182066 REVERSE LENGTH=177	LOC_Os03g03500.1	protein|heavy metal-associated domain containing protein, expressed	IMGA|Medtr1g099800.1	hypothetical protein chr1 28995539-28994338 F EGN_Mt100125 20111014	GO:0030001|metal ion transport	GO:0046872|metal ion binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06665	G	G1	NA	NA	POPTR_0002s16510	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06666	A	A1S	Potri.002G163600	Potri.002G163600(AS)	POPTR_0002s16520	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0008270|zinc ion binding	GO:0005575|cellular_component
pt2_06667	A	A1S	Potri.002G163700	Potri.002G163700(AS)	POPTR_0002s16530	sp|Q9MB95|1A11_PRUMU	1-aminocyclopropane-1-carboxylate synthase 1 OS=Prunus mume GN=ACS1 PE=2 SV=1	AT3G61510.1	| Symbols: ACS1, AT-ACS1 | ACC synthase 1 | chr3:22763495-22765730 REVERSE LENGTH=488	LOC_Os04g48850.1	protein|aminotransferase, classes I and II, domain containing protein, expressed	IMGA|Medtr5g015020.1	1-aminocyclopropane-1-carboxylate synthase chr5 4879142-4877065 E EGN_Mt100125 20111014	GO:0009058|biosynthetic process GO:0009693|ethylene biosynthetic process GO:0042218|1-aminocyclopropane-1-carboxylate biosynthetic process	GO:0003824|catalytic activity GO:0016740|transferase activity GO:0016847|1-aminocyclopropane-1-carboxylate synthase activity GO:0030170|pyridoxal phosphate binding	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_06668	A	A1S	Potri.002G163900	Potri.002G163900(AS)	POPTR_0002s16540	NA	NA	AT4G01270.1	| Symbols: | RING/U-box superfamily protein | chr4:532351-534891 FORWARD LENGTH=506	NA	NA	NA	NA	NA	GO:0008270|zinc ion binding	GO:0005737|cytoplasm
pt2_06669	A	A1S	Potri.002G164000	Potri.002G164000(AS)	POPTR_0002s16550	NA	NA	AT4G01270.1	| Symbols: | RING/U-box superfamily protein | chr4:532351-534891 FORWARD LENGTH=506	LOC_Os08g05560.1	protein|zinc finger, C3HC4 type domain containing protein, expressed	NA	NA	NA	GO:0008270|zinc ion binding	GO:0005737|cytoplasm
pt2_06670	A	A2S	Potri.002G164100	Potri.002G164100(AS) Potri.014G090100(DS)	POPTR_0002s16570	sp|Q8RVQ5|EXOC5_ARATH	Exocyst complex component 5 OS=Arabidopsis thaliana GN=SEC10 PE=2 SV=2	AT5G12370.2	| Symbols: SEC10 | exocyst complex component sec10 | chr5:4003002-4008445 REVERSE LENGTH=825	LOC_Os12g13590.1	protein|exocyst complex component 5, putative, expressed	NA	NA	GO:0006887|exocytosis GO:0007015|actin filament organization GO:0048278|vesicle docking	GO:0003674|molecular_function	GO:0000145|exocyst GO:0005737|cytoplasm GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane
pt2_06671	C	C1S	Potri.002G164100	Potri.002G164100(CS)	sp|Q8RVQ5|EXOC5_ARATH	Exocyst complex component 5 OS=Arabidopsis thaliana GN=SEC10 PE=2 SV=2	AT5G12370.2	| Symbols: SEC10 | exocyst complex component sec10 | chr5:4003002-4008445 REVERSE LENGTH=825	LOC_Os12g13590.1	protein|exocyst complex component 5, putative, expressed	NA	NA	GO:0006887|exocytosis GO:0007015|actin filament organization GO:0048278|vesicle docking	GO:0003674|molecular_function	GO:0000145|exocyst GO:0005737|cytoplasm GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane
pt2_06672	A	A1S	Potri.002G164300	Potri.002G164300(AS)	POPTR_0002s16580	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06673	A	A1S	Potri.002G164400	Potri.002G164400(AS)	POPTR_0002s16590	sp|O04609|WRK22_ARATH	WRKY transcription factor 22 OS=Arabidopsis thaliana GN=WRKY22 PE=2 SV=1	AT4G01250.1	| Symbols: WRKY22, AtWRKY22 | WRKY family transcription factor | chr4:522839-524129 REVERSE LENGTH=298	LOC_Os02g16540.1	protein|WRKY39, expressed	IMGA|Medtr5g016610.1	WRKY transcription factor chr5 5721691-5723310 E EGN_Mt100125 20111014	GO:0002679|respiratory burst involved in defense response GO:0006355|regulation of transcription, DNA-dependent GO:0010150|leaf senescence GO:0010200|response to chitin GO:0035556|intracellular signal transduction	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_06674	A	A1S	Potri.002G164400	Potri.002G164400(AS)	POPTR_0002s16590	sp|O04609|WRK22_ARATH	WRKY transcription factor 22 OS=Arabidopsis thaliana GN=WRKY22 PE=2 SV=1	AT4G01250.1	| Symbols: WRKY22, AtWRKY22 | WRKY family transcription factor | chr4:522839-524129 REVERSE LENGTH=298	LOC_Os02g16540.1	protein|WRKY39, expressed	IMGA|Medtr5g016610.1	WRKY transcription factor chr5 5721691-5723310 E EGN_Mt100125 20111014	GO:0002679|respiratory burst involved in defense response GO:0006355|regulation of transcription, DNA-dependent GO:0010150|leaf senescence GO:0010200|response to chitin GO:0035556|intracellular signal transduction	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_06675	A	A1S	Potri.002G164400	Potri.002G164400(AS)	POPTR_0002s16590	sp|O04609|WRK22_ARATH	WRKY transcription factor 22 OS=Arabidopsis thaliana GN=WRKY22 PE=2 SV=1	AT4G01250.1	| Symbols: WRKY22, AtWRKY22 | WRKY family transcription factor | chr4:522839-524129 REVERSE LENGTH=298	LOC_Os02g16540.1	protein|WRKY39, expressed	IMGA|Medtr5g016610.1	WRKY transcription factor chr5 5721691-5723310 E EGN_Mt100125 20111014	GO:0002679|respiratory burst involved in defense response GO:0006355|regulation of transcription, DNA-dependent GO:0010150|leaf senescence GO:0010200|response to chitin GO:0035556|intracellular signal transduction	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_06676	C	C1S	Potri.002G164500	Potri.002G164500(CS)	sp|Q9M316|PP292_ARATH	Pentatricopeptide repeat-containing protein At3g61520, mitochondrial OS=Arabidopsis thaliana GN=At3g61520 PE=2 SV=1	AT3G61520.1	| Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr3:22768974-22771274 REVERSE LENGTH=766	LOC_Os06g13950.1	protein|pentatricopeptide, putative, expressed	IMGA|Medtr5g029690.1	Pentatricopeptide repeat-containing protein chr5 12239519-12233813 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_06677	C	C1S	Potri.002G164600	Potri.002G164600(CS)	sp|Q7NMK3|PANB_GLOVI	3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Gloeobacter violaceus (strain PCC 7421) GN=panB PE=3 SV=2	AT3G61530.2	| Symbols: PANB2 | Phosphoenolpyruvate carboxylase family protein | chr3:22771692-22773313 REVERSE LENGTH=354	LOC_Os01g12560.1	protein|3-methyl-2-oxobutanoate hydroxymethyltransferase, putative, expressed	NA	NA	GO:0015940|pantothenate biosynthetic process	GO:0003824|catalytic activity GO:0003864|3-methyl-2-oxobutanoate hydroxymethyltransferase activity	GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_06678	A	A1S	Potri.002G164700	Potri.002G164700(AS)	POPTR_0002s16620	sp|P46547|PIP_AERSO	Proline iminopeptidase OS=Aeromonas sobria GN=pip PE=1 SV=3	AT3G61540.1	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr3:22773399-22775699 FORWARD LENGTH=515	LOC_Os06g06820.1	protein|hydrolase, alpha/beta fold family domain containing protein, expressed	NA	NA	GO:0006508|proteolysis GO:0019344|cysteine biosynthetic process	GO:0008233|peptidase activity	GO:0005773|vacuole GO:0005829|cytosol GO:0009507|chloroplast
pt2_06679	A	A1S	Potri.002G164800	Potri.002G164800(AS)	POPTR_0002s16630	sp|Q5RBU2|RM46_PONAB	39S ribosomal protein L46, mitochondrial OS=Pongo abelii GN=MRPL46 PE=2 SV=1	AT1G14620.1	| Symbols: DECOY | decoy | chr1:5014948-5016501 REVERSE LENGTH=233	LOC_Os06g19640.1	protein|39S ribosomal protein L46, mitochondrial precursor, putative, expressed	NA	NA	GO:0008150|biological_process GO:0009909|regulation of flower development GO:0034968|histone lysine methylation	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_06680	A	A2S	Potri.002G164900	Potri.002G164900(AS) Potri.014G090700(BS)	POPTR_0002s16640	sp|Q8GY11|WRK43_ARATH	Probable WRKY transcription factor 43 OS=Arabidopsis thaliana GN=WRKY43 PE=1 SV=1	AT2G46130.1	| Symbols: WRKY43, ATWRKY43 | WRKY DNA-binding protein 43 | chr2:18957254-18957669 FORWARD LENGTH=109	LOC_Os01g53260.1	protein|WRKY23, expressed	IMGA|Medtr1g086790.1	WRKY transcription factor chr1 23203731-23201879 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_06681	A	A1S	Potri.002G165000	Potri.002G165000(AS)	POPTR_0002s16650	sp|P46518|LEA14_GOSHI	Late embryogenesis abundant protein Lea14-A OS=Gossypium hirsutum GN=LEA14-A PE=2 SV=1	AT2G46140.1	| Symbols: | Late embryogenesis abundant protein | chr2:18959163-18960362 FORWARD LENGTH=166	LOC_Os01g12580.1	protein|late embryogenesis abundant protein, putative, expressed	IMGA|Medtr5g088850.1	Desiccation protectant protein Lea14-like protein chr5 37547154-37545669 F EGN_Mt100125 20111014	GO:0009269|response to desiccation GO:0009793|embryo development ending in seed dormancy	GO:0003674|molecular_function	GO:0005829|cytosol GO:0005886|plasma membrane GO:0048046|apoplast
pt2_06682	B	B1S	Potri.002G165100	Potri.002G165100(BS)	POPTR_0002s16660	NA	NA	AT2G46150.1	| Symbols: | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | chr2:18961424-18962089 FORWARD LENGTH=221	LOC_Os01g53470.1	protein|harpin-induced protein 1 domain containing protein, expressed	IMGA|Medtr5g009910.1	hypothetical protein chr5 2291145-2290576 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005886|plasma membrane
pt2_06683	A	A1S	Potri.002G165200	Potri.002G165200(AS)	POPTR_0002s16670	sp|Q9M313|ATL68_ARATH	RING-H2 finger protein ATL68 OS=Arabidopsis thaliana GN=ATL68 PE=2 SV=1	AT3G61550.1	| Symbols: | RING/U-box superfamily protein | chr3:22776444-22777082 FORWARD LENGTH=212	LOC_Os01g53500.1	protein|RING-H2 finger protein ATL2M, putative, expressed	IMGA|Medtr5g009200.1	RING finger protein chr5 1909541-1908258 H EGN_Mt100125 20111014	NA	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_06684	B	B2A	Potri.002G165300	Potri.002G165300(BA) Potri.014G091100(DA)	POPTR_0002s16680	NA	NA	AT4G01240.1	| Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr4:517795-521972 REVERSE LENGTH=659	LOC_Os06g27980.1	protein|methyltransferase domain containing protein, expressed	IMGA|contig_114282_1.1	Unknown protein contig_114282 2027-555 H PREDN 20111014	NA	GO:0003674|molecular_function GO:0008168|methyltransferase activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06685	A	A1S	Potri.002G165400	Potri.002G165400(AS)	POPTR_0002s16690	sp|O82352|RTNLE_ARATH	Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1 SV=1	AT2G46170.1	| Symbols: | Reticulon family protein | chr2:18965410-18966940 FORWARD LENGTH=255	LOC_Os05g45050.1	protein|reticulon domain containing protein, putative, expressed	IMGA|Medtr5g090340.3	Reticulon-like protein B8 chr5 38304798-38301150 F EGN_Mt100125 20111014	GO:0006007|glucose catabolic process GO:0080167|response to karrikin	NA	GO:0005783|endoplasmic reticulum GO:0005886|plasma membrane
pt2_06686	A	A1S	Potri.002G165500	Potri.002G165500(AS)	POPTR_0002s16700	sp|Q8VYU6|GOGC4_ARATH	Golgin candidate 4 OS=Arabidopsis thaliana GN=GC4 PE=2 SV=1	AT2G46180.1	| Symbols: GC4 | golgin candidate 4 | chr2:18967482-18971260 REVERSE LENGTH=725	LOC_Os08g29730.1	protein|intracellular protein transport protein USO1-related, putative, expressed	NA	NA	GO:0007030|Golgi organization GO:0030244|cellulose biosynthetic process GO:0048193|Golgi vesicle transport	GO:0003674|molecular_function	GO:0005794|Golgi apparatus
pt2_06687	A	A1S	Potri.002G165600	Potri.002G165600(AS)	POPTR_0002s16710	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06688	A	A1S	Potri.002G165700	Potri.002G165700(AS)	POPTR_0002s16720	sp|P23472|CHLY_HEVBR	Hevamine-A OS=Hevea brasiliensis PE=1 SV=2	AT5G24090.1	| Symbols: ATCHIA, CHIA | chitinase A | chr5:8143805-8145153 REVERSE LENGTH=302	LOC_Os07g19040.1	protein|glycosyl hydrolase, putative, expressed	IMGA|Medtr5g043550.1	Class III acidic chitinase chr5 18721014-18720130 H EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0009409|response to cold GO:0009611|response to wounding GO:0009642|response to light intensity GO:0009651|response to salt stress GO:0010228|vegetative to reproductive phase transition of meristem GO:0016926|protein desumoylation GO:0042631|cellular response to water deprivation GO:0050665|hydrogen peroxide biosynthetic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0043169|cation binding	GO:0005576|extracellular region
pt2_06689	B	B6S	Potri.012G122300	Potri.012G122300(BS) Potri.004G118300(BS) Potri.014G092000(DS) Potri.009G001000(DS) Potri.010G026600(DS) Potri.005G097100(DS)	POPTR_0002s16730	NA	NA	AT1G43722.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). | chr1:16496403-16497377 FORWARD LENGTH=324	ChrUn.fgenesh.mRNA.24	protein|hypothetical protein	IMGA|Medtr1g059320.1	hypothetical protein chr1 15361664-15360985 H EGN_Mt100125 20111014	NA	GO:0003674|molecular_function GO:0016788|hydrolase activity, acting on ester bonds	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06690	A	A1S	Potri.002G165800	Potri.002G165800(AS)	POPTR_0002s16740	sp|A4IFP3|FADS3_BOVIN	Fatty acid desaturase 3 OS=Bos taurus GN=FADS3 PE=2 SV=1	AT2G46210.1	| Symbols: | Fatty acid/sphingolipid desaturase | chr2:18977542-18978891 FORWARD LENGTH=449	LOC_Os09g16920.1	protein|desaturase/cytochrome b5 protein, putative, expressed	IMGA|Medtr1g016070.1	Delta-6-desaturase chr1 4597988-4599474 E EGN_Mt100125 20111014	GO:0006629|lipid metabolic process GO:0006633|fatty acid biosynthetic process GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0016491|oxidoreductase activity GO:0016717|oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water GO:0020037|heme binding	NA
pt2_06691	A	A1S	Potri.002G165900	Potri.002G165900(AS)	POPTR_0002s16750	sp|Q8S8M5|ABIL1_ARATH	Protein ABIL1 OS=Arabidopsis thaliana GN=ABIL1 PE=1 SV=1	AT2G46225.1	| Symbols: ABIL1 | ABI-1-like 1 | chr2:18982113-18984074 FORWARD LENGTH=298	LOC_Os01g43420.1	protein|expressed protein	IMGA|contig_65138_2.1	Protein ABIL1 contig_65138 4880-2197 E PREDN 20111014	GO:0010090|trichome morphogenesis GO:0045010|actin nucleation	GO:0005515|protein binding	GO:0005737|cytoplasm GO:0031209|SCAR complex
pt2_06692	A	A2S	Potri.002G166000	Potri.002G166000(AS) Potri.014G092400(DS)	POPTR_0002s16760	sp|Q54RP0|AGTA_DICDI	UDP-galactose:fucoside alpha-3-galactosyltransferase OS=Dictyostelium discoideum GN=agtA PE=1 SV=1	AT4G01220.1	| Symbols: | Nucleotide-diphospho-sugar transferase family protein | chr4:513431-515648 REVERSE LENGTH=360	LOC_Os05g32120.1	protein|alpha 1,3-xylosyltransferase, putative, expressed	NA	NA	GO:0010306|rhamnogalacturonan II biosynthetic process GO:0048868|pollen tube development	GO:0042285|xylosyltransferase activity	GO:0005794|Golgi apparatus GO:0009507|chloroplast
pt2_06693	A	A1S	Potri.002G166100	Potri.002G166100(AS)	POPTR_0002s16770	NA	NA	AT4G01210.1	| Symbols: | glycosyl transferase family 1 protein | chr4:507738-512362 REVERSE LENGTH=1031	LOC_Os01g43380.1	protein|glycosyltransferase family protein 1, putative, expressed	NA	NA	GO:0001666|response to hypoxia GO:0009058|biosynthetic process GO:0019375|galactolipid biosynthetic process	GO:0016757|transferase activity, transferring glycosyl groups	GO:0005575|cellular_component GO:0005739|mitochondrion GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_06694	C	C2S	Potri.002G166200	Potri.002G166200(CS) Potri.014G092600(CS)	sp|Q5RFQ0|FCF1_PONAB	rRNA-processing protein FCF1 homolog OS=Pongo abelii GN=FCF1 PE=2 SV=1	AT2G46230.1	| Symbols: | PIN domain-like family protein | chr2:18984459-18985850 REVERSE LENGTH=196	LOC_Os06g06410.2	protein|rRNA-processing protein FCF, putative, expressed	IMGA|Medtr5g071380.1	rRNA-processing protein UTP23-like protein chr5 29330277-29326392 E EGN_Mt100125 20111014	GO:0008150|biological_process GO:0051604|protein maturation	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06695	A	A1S	Potri.002G166300	Potri.002G166300(AS)	POPTR_0002s16790	sp|O82345|BAG6_ARATH	BAG family molecular chaperone regulator 6 OS=Arabidopsis thaliana GN=BAG6 PE=1 SV=1	AT2G46240.1	| Symbols: BAG6, ATBAG6 | BCL-2-associated athanogene 6 | chr2:18986586-18989827 FORWARD LENGTH=1043	NA	NA	NA	NA	GO:0006457|protein folding GO:0009408|response to heat GO:0009644|response to high light intensity GO:0010228|vegetative to reproductive phase transition of meristem GO:0010286|heat acclimation GO:0012502|induction of programmed cell death GO:0034976|response to endoplasmic reticulum stress GO:0042542|response to hydrogen peroxide GO:0050832|defense response to fungus	GO:0005516|calmodulin binding GO:0051087|chaperone binding	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_06696	A	A1S	Potri.002G166400	Potri.002G166400(AS)	POPTR_0002s16800	NA	NA	AT4G01200.1	| Symbols: | Calcium-dependent lipid-binding (CaLB domain) family protein | chr4:506783-507535 REVERSE LENGTH=250	LOC_Os01g47040.1	protein|C2 domain containing protein, putative, expressed	IMGA|Medtr1g073210.1	RNA-binding protein 12B chr1 18609235-18607187 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_06697	A	A1S	Potri.002G166500	Potri.002G166500(AS)	POPTR_0002s16810	sp|Q9M310|FBK77_ARATH	F-box/kelch-repeat protein At3g61590 OS=Arabidopsis thaliana GN=At3g61590 PE=1 SV=1	AT3G61590.2	| Symbols: HWS | Galactose oxidase/kelch repeat superfamily protein | chr3:22792914-22794149 FORWARD LENGTH=411	LOC_Os01g47050.1	protein|OsFBK1 - F-box domain and kelch repeat containing protein, expressed	NA	NA	GO:0006869|lipid transport GO:0048513|organ development	GO:0004842|ubiquitin-protein ligase activity	GO:0005634|nucleus
pt2_06698	A	A2S	Potri.002G166600	Potri.002G166600(AS) Potri.014G093400(DS)	POPTR_0002s16820	sp|Q66GQ2|Y5162_ARATH	Uncharacterized protein At5g41620 OS=Arabidopsis thaliana GN=At5g41620 PE=1 SV=2	AT5G41620.1	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: intracellular protein transport protein USO1-related (TAIR:AT1G64180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:16646330-16648776 FORWARD LENGTH=623	LOC_Os02g15980.1	protein|expressed protein	IMGA|Medtr5g009750.1	hypothetical protein chr5 2200925-2197271 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005737|cytoplasm GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_06699	A	A2S	Potri.002G166700	Potri.002G166700(AS) Potri.014G093700(DS)	POPTR_0002s16840	sp|Q9FPW6|POB1_ARATH	BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana GN=POB1 PE=2 SV=2	AT3G61600.2	| Symbols: ATPOB1, POB1 | POZ/BTB containin G-protein 1 | chr3:22795704-22798069 FORWARD LENGTH=561	LOC_Os06g31100.1	protein|E1-BTB2 - Bric-a-Brac, Tramtrack, and Broad Complex domain with E1 subfamily conserved sequence, expressed	NA	NA	GO:0009954|proximal/distal pattern formation GO:0010114|response to red light GO:0010227|floral organ abscission GO:0048439|flower morphogenesis	GO:0005515|protein binding GO:0042803|protein homodimerization activity GO:0046982|protein heterodimerization activity	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_06700	A	A1S	Potri.002G166800	Potri.002G166800(AS)	POPTR_0002s16850	sp|O04616|Y4115_ARATH	Uncharacterized protein At4g01150, chloroplastic OS=Arabidopsis thaliana GN=At4g01150 PE=1 SV=1	AT4G01150.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38100.1); Has 323 Blast hits to 323 proteins in 59 species: Archae - 0; Bacteria - 107; Metazoa - 0; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). | chr4:493692-494668 FORWARD LENGTH=164	LOC_Os06g15400.1	protein|expressed protein	IMGA|Medtr5g032440.1	Glutamyl-tRNA synthetase chr5 13506160-13502156 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009579|thylakoid GO:0009941|chloroplast envelope GO:0010287|plastoglobule
pt2_06701	A	A1S	Potri.002G166900	Potri.002G166900(AS)	POPTR_0002s16860	NA	NA	AT4G01140.1	| Symbols: | Protein of unknown function (DUF1191) | chr4:491012-491932 REVERSE LENGTH=306	LOC_Os12g02550.1	protein|expressed protein	IMGA|Medtr5g075750.1	hypothetical protein chr5 31232635-31231727 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_06702	A	A1S	Potri.002G167100	Potri.002G167100(AS)	POPTR_0002s16870	sp|Q99089|CPRF1_PETCR	Common plant regulatory factor 1 OS=Petroselinum crispum GN=CPRF1 PE=2 SV=1	AT2G46270.1	| Symbols: GBF3 | G-box binding factor 3 | chr2:19000859-19002901 FORWARD LENGTH=382	LOC_Os05g49420.1	protein|transcription factor, putative, expressed	IMGA|Medtr5g028850.1	G-box-binding factor chr5 11821253-11827602 E EGN_Mt100125 20111014	GO:0000303|response to superoxide GO:0006351|transcription, DNA-dependent GO:0006355|regulation of transcription, DNA-dependent GO:0007165|signal transduction GO:0009410|response to xenobiotic stimulus GO:0009414|response to water deprivation GO:0009611|response to wounding GO:0009651|response to salt stress GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009743|response to carbohydrate stimulus GO:0009753|response to jasmonic acid stimulus GO:0009873|ethylene mediated signaling pathway GO:0030968|endoplasmic reticulum unfolded protein response GO:0042538|hyperosmotic salinity response	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding GO:0046983|protein dimerization activity	GO:0005634|nucleus GO:0005829|cytosol
pt2_06703	A	A1S	Potri.002G167200	Potri.002G167200(AS)	POPTR_0002s16880	sp|Q40784|AAPC_CENCI	Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris PE=2 SV=1	AT3G61610.1	| Symbols: | Galactose mutarotase-like superfamily protein | chr3:22799480-22801029 FORWARD LENGTH=317	LOC_Os01g46950.1	protein|aldose 1-epimerase, putative, expressed	IMGA|Medtr5g009670.1	Apospory-associated protein C chr5 2153652-2151588 F EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0006012|galactose metabolic process GO:0006499|N-terminal protein myristoylation	GO:0003824|catalytic activity GO:0004034|aldose 1-epimerase activity GO:0016853|isomerase activity GO:0030246|carbohydrate binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06704	A	A1S	Potri.002G167300	Potri.002G167300(AS)	POPTR_0002s16890	NA	NA	AT2G46300.1	| Symbols: | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | chr2:19008392-19009247 FORWARD LENGTH=252	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_06705	A	A1S	Potri.002G167400	Potri.002G167400(AS)	POPTR_0002s16900	sp|Q9SUE3|CRF4_ARATH	Ethylene-responsive transcription factor CRF4 OS=Arabidopsis thaliana GN=CRF4 PE=1 SV=2	AT4G27950.1	| Symbols: CRF4 | cytokinin response factor 4 | chr4:13909732-13910739 REVERSE LENGTH=335	LOC_Os01g12440.1	protein|AP2 domain containing protein, expressed	IMGA|Medtr5g009620.1	Ethylene-responsive transcription factor RAP2-6 chr5 2125011-2123721 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0042991|transcription factor import into nucleus GO:0048366|leaf development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_06706	A	A1S	Potri.002G167500	Potri.002G167500(AS)	POPTR_0002s16910	NA	NA	NA	NA	NA	NA	NA	NA	GO:0043572|plastid fission	GO:0003674|molecular_function GO:0005515|protein binding	GO:0005739|mitochondrion GO:0009536|plastid GO:0031359|integral to chloroplast outer membrane
pt2_06707	A	A1S	Potri.002G167700	Potri.002G167700(AS)	POPTR_0002s16920	sp|Q6DHC3|S2540_DANRE	Solute carrier family 25 member 40 OS=Danio rerio GN=slc25a40 PE=2 SV=1	AT2G46320.1	| Symbols: | Mitochondrial substrate carrier family protein | chr2:19015998-19018020 FORWARD LENGTH=361	LOC_Os08g29720.2	protein|mitochondrial carrier protein, putative, expressed	IMGA|Medtr1g012030.1	Brittle 1 protein-like protein chr1 2768338-2765042 H EGN_Mt100125 20111014	GO:0006810|transport GO:0006839|mitochondrial transport GO:0055085|transmembrane transport	GO:0005215|transporter activity	GO:0005739|mitochondrion GO:0005743|mitochondrial inner membrane
pt2_06708	A	A1S	Potri.002G167800	Potri.002G167800(AS)	POPTR_0002s16930	sp|P38558|TBG2_ARATH	Tubulin gamma-2 chain OS=Arabidopsis thaliana GN=TUBG2 PE=2 SV=1	AT5G05620.1	| Symbols: TUBG2, ATGCP2, GCP2 | gamma-tubulin complex protein 2 | chr5:1679340-1681719 FORWARD LENGTH=474	LOC_Os05g06450.2	protein|tubulin/FtsZ domain containing protein, putative, expressed	IMGA|contig_53526_2.1	Tubulin beta chain contig_53526 5156-2874 H PREDN 20111014	GO:0000914|phragmoplast assembly GO:0006184|GTP catabolic process GO:0007020|microtubule nucleation GO:0009553|embryo sac development GO:0010103|stomatal complex morphogenesis GO:0046785|microtubule polymerization GO:0048366|leaf development GO:0048768|root hair cell tip growth GO:0051258|protein polymerization GO:0051641|cellular localization	GO:0003924|GTPase activity GO:0005198|structural molecule activity GO:0005525|GTP binding	GO:0005618|cell wall GO:0005635|nuclear envelope GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0005874|microtubule GO:0005886|plasma membrane GO:0043234|protein complex
pt2_06709	A	A1S	Potri.002G167900	Potri.002G167900(AS)	POPTR_0002s16940	NA	NA	AT5G41761.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:16711437-16711742 FORWARD LENGTH=101	LOC_Os06g33200.1	protein|expressed protein	IMGA|Medtr5g080750.1	hypothetical protein chr5 33562181-33561990 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06710	C	C1S	Potri.002G168000	Potri.002G168000(CS)	NA	NA	AT5G41730.1	| Symbols: | Protein kinase family protein | chr5:16684914-16687145 REVERSE LENGTH=711	LOC_Os01g43350.1	protein|protein kinase family protein, putative, expressed	IMGA|Medtr5g009600.1	Integrin-linked protein kinase chr5 2112127-2108970 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004712|protein serine/threonine/tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	NA
pt2_06711	A	A1S	Potri.002G168100	Potri.002G168100(AS)	POPTR_0002s16950	sp|Q54MZ4|MCFB_DICDI	Mitochondrial substrate carrier family protein B OS=Dictyostelium discoideum GN=mcfB PE=3 SV=1	AT4G01100.1	| Symbols: ADNT1 | adenine nucleotide transporter 1 | chr4:477411-479590 FORWARD LENGTH=352	LOC_Os05g50840.1	protein|mitochondrial carrier protein, putative, expressed	IMGA|Medtr5g009500.1	Calcium-binding mitochondrial carrier protein SCaMC-1-B chr5 2040638-2043955 E EGN_Mt100125 20111014	GO:0006007|glucose catabolic process GO:0006096|glycolysis GO:0006098|pentose-phosphate shunt GO:0006810|transport GO:0006839|mitochondrial transport GO:0009060|aerobic respiration GO:0009651|response to salt stress GO:0015866|ADP transport GO:0015867|ATP transport GO:0046686|response to cadmium ion GO:0055085|transmembrane transport GO:0080121|AMP transport	GO:0005347|ATP transmembrane transporter activity GO:0015217|ADP transmembrane transporter activity GO:0080122|AMP transmembrane transporter activity	GO:0005739|mitochondrion GO:0005743|mitochondrial inner membrane GO:0005774|vacuolar membrane GO:0009536|plastid GO:0016020|membrane
pt2_06712	A	A1S	Potri.002G168200	Potri.002G168200(AS)	POPTR_0002s16960	sp|Q6I581|GH35_ORYSJ	Probable indole-3-acetic acid-amido synthetase GH3.5 OS=Oryza sativa subsp. japonica GN=GH3.5 PE=2 SV=1	AT2G46370.2	| Symbols: JAR1, FIN219 | Auxin-responsive GH3 family protein | chr2:19034342-19036369 FORWARD LENGTH=575	LOC_Os05g50890.2	protein|OsGH3.5 - Probable indole-3-acetic acid-amido synthetase, expressed	IMGA|contig_62415_1.1	GH3 auxin-responsive promoter contig_62415 3548-2136 H PREDN 20111014	GO:0009585|red, far-red light phototransduction GO:0009611|response to wounding GO:0009627|systemic acquired resistance GO:0009640|photomorphogenesis GO:0009694|jasmonic acid metabolic process GO:0009733|response to auxin stimulus GO:0009753|response to jasmonic acid stimulus GO:0009861|jasmonic acid and ethylene-dependent systemic resistance GO:0009864|induced systemic resistance, jasmonic acid mediated signaling pathway GO:0010046|response to mycotoxin GO:0010119|regulation of stomatal movement GO:0010193|response to ozone GO:0010224|response to UV-B GO:0031348|negative regulation of defense response GO:0071365|cellular response to auxin stimulus GO:2000030|regulation of response to red or far red light GO:2000377|regulation of reactive oxygen species metabolic process	GO:0003824|catalytic activity GO:0005524|ATP binding GO:0019899|enzyme binding GO:0070566|adenylyltransferase activity GO:0080123|jasmonate-amino synthetase activity	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005773|vacuole
pt2_06713	A	A1S	Potri.002G168300	Potri.002G168300(AS)	POPTR_0002s16970	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06714	A	A1S	Potri.002G168400	Potri.002G168400(AS)	POPTR_0002s16980	NA	NA	AT1G01430.1	| Symbols: TBL25 | TRICHOME BIREFRINGENCE-LIKE 25 | chr1:156953-158536 REVERSE LENGTH=456	LOC_Os05g12380.1	protein|expressed protein	IMGA|contig_53322_2.1	Leaf senescence protein-like protein contig_53322 4450-3428 H PREDN 20111014	GO:0008150|biological_process	NA	GO:0005575|cellular_component
pt2_06715	A	A1S	Potri.002G168500	Potri.002G168500(AS)	POPTR_0002s16990	NA	NA	AT3G58800.1	| Symbols: | unknown protein; Has 75 Blast hits to 75 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 17; Other Eukaryotes - 5 (source: NCBI BLink). | chr3:21748562-21749596 FORWARD LENGTH=344	LOC_Os01g54440.1	protein|expressed protein	IMGA|Medtr5g091790.1	hypothetical protein chr5 39017099-39015713 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_06716	A	A2S	Potri.002G168600	Potri.002G168600(AS) Potri.014G096100(DS)	POPTR_0002s17000	sp|Q9AR73|HQGT_RAUSE	Hydroquinone glucosyltransferase OS=Rauvolfia serpentina GN=AS PE=1 SV=1	AT4G01070.1	| Symbols: GT72B1, UGT72B1 | UDP-Glycosyltransferase superfamily protein | chr4:461858-463300 REVERSE LENGTH=480	LOC_Os11g38650.1	protein|UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed	IMGA|Medtr1g019510.1	UDP-glycosyltransferase chr1 6057847-6059762 H EGN_Mt100125 20111014	GO:0006612|protein targeting to membrane GO:0006805|xenobiotic metabolic process GO:0008152|metabolic process GO:0009611|response to wounding GO:0009636|response to toxin GO:0009651|response to salt stress GO:0009805|coumarin biosynthetic process GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010363|regulation of plant-type hypersensitive response GO:0042178|xenobiotic catabolic process	GO:0008194|UDP-glycosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups GO:0035251|UDP-glucosyltransferase activity	GO:0005634|nucleus
pt2_06717	A	A1S	Potri.002G168700	Potri.002G168700(AS)	POPTR_0002s17010	sp|Q9SKD9|WRK46_ARATH	Probable WRKY transcription factor 46 OS=Arabidopsis thaliana GN=WRKY46 PE=2 SV=1	AT2G46400.1	| Symbols: WRKY46, ATWRKY46 | WRKY DNA-binding protein 46 | chr2:19043676-19044754 REVERSE LENGTH=295	LOC_Os08g29660.1	protein|WRKY69, expressed	IMGA|Medtr5g067680.1	WRKY transcription factor-30 chr5 27618450-27622967 H EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0002831|regulation of response to biotic stimulus GO:0006355|regulation of transcription, DNA-dependent GO:0006612|protein targeting to membrane GO:0009595|detection of biotic stimulus GO:0009697|salicylic acid biosynthetic process GO:0009751|response to salicylic acid stimulus GO:0009816|defense response to bacterium, incompatible interaction GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010150|leaf senescence GO:0010193|response to ozone GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0031347|regulation of defense response GO:0031348|negative regulation of defense response GO:0042542|response to hydrogen peroxide GO:0042742|defense response to bacterium GO:0043900|regulation of multi-organism process GO:0045893|positive regulation of transcription, DNA-dependent GO:0050832|defense response to fungus	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus GO:0009507|chloroplast
pt2_06718	A	A1S	Potri.002G168800	Potri.002G168800(AS)	POPTR_0002s17020	sp|A4GYS4|CYF_POPTR	Apocytochrome f OS=Populus trichocarpa GN=petA PE=3 SV=1	ATCG00540.1	| Symbols: PETA | photosynthetic electron transfer A | chrC:61657-62619 FORWARD LENGTH=320	LOC_Os02g24596.1	protein|apocytochrome f precursor, putative, expressed	NA	NA	GO:0006091|generation of precursor metabolites and energy GO:0006354|DNA-dependent transcription, elongation GO:0009767|photosynthetic electron transport chain GO:0010207|photosystem II assembly GO:0015979|photosynthesis GO:0019684|photosynthesis, light reaction	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0020037|heme binding GO:0045158|electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity	GO:0009507|chloroplast GO:0009512|cytochrome b6f complex GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009579|thylakoid GO:0016020|membrane GO:0031361|integral to thylakoid membrane
pt2_06719	A	A1S	Potri.002G168900	Potri.002G168900(AS)	POPTR_0002s17030	sp|Q8GV05|TRY_ARATH	Transcription factor TRY OS=Arabidopsis thaliana GN=TRY PE=1 SV=1	AT5G53200.1	| Symbols: TRY | Homeodomain-like superfamily protein | chr5:21582913-21583960 FORWARD LENGTH=106	LOC_Os01g43180.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr5g009460.1	Transcription factor CPC chr5 2029046-2028033 H EGN_Mt100125 20111014	GO:0001708|cell fate specification GO:0006355|regulation of transcription, DNA-dependent GO:0009913|epidermal cell differentiation GO:0010091|trichome branching	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_06720	A	A1S	Potri.002G169100	Potri.002G169100(AS)	POPTR_0002s17040	sp|Q9M158|STR4_ARATH	Rhodanese-like domain-containing protein 4, chloroplastic OS=Arabidopsis thaliana GN=STR4 PE=1 SV=2	AT4G01050.1	| Symbols: TROL | thylakoid rhodanese-like | chr4:455874-458175 FORWARD LENGTH=466	LOC_Os02g15750.1	protein|expressed protein	NA	NA	GO:0000096|sulfur amino acid metabolic process GO:0000165|MAPK cascade GO:0002831|regulation of response to biotic stimulus GO:0006364|rRNA processing GO:0006546|glycine catabolic process GO:0006612|protein targeting to membrane GO:0006636|unsaturated fatty acid biosynthetic process GO:0006733|oxidoreduction coenzyme metabolic process GO:0006766|vitamin metabolic process GO:0008652|cellular amino acid biosynthetic process GO:0009072|aromatic amino acid family metabolic process GO:0009106|lipoate metabolic process GO:0009108|coenzyme biosynthetic process GO:0009117|nucleotide metabolic process GO:0009409|response to cold GO:0009416|response to light stimulus GO:0009595|detection of biotic stimulus GO:0009637|response to blue light GO:0009657|plastid organization GO:0009695|jasmonic acid biosynthetic process GO:0009697|salicylic acid biosynthetic process GO:0009744|response to sucrose stimulus GO:0009749|response to glucose stimulus GO:0009772|photosynthetic electron transport in photosystem II GO:0009773|photosynthetic electron transport in photosystem I GO:0009814|defense response, incompatible interaction GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009902|chloroplast relocation GO:0010027|thylakoid membrane organization GO:0010114|response to red light GO:0010200|response to chitin GO:0010207|photosystem II assembly GO:0010218|response to far red light GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0015979|photosynthesis GO:0015994|chlorophyll metabolic process GO:0015995|chlorophyll biosynthetic process GO:0019216|regulation of lipid metabolic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019344|cysteine biosynthetic process GO:0019684|photosynthesis, light reaction GO:0019748|secondary metabolic process GO:0031348|negative regulation of defense response GO:0031408|oxylipin biosynthetic process GO:0034660|ncRNA metabolic process GO:0035304|regulation of protein dephosphorylation GO:0042742|defense response to bacterium GO:0043900|regulation of multi-organism process GO:0044272|sulfur compound biosynthetic process GO:0050832|defense response to fungus	GO:0005515|protein binding	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009941|chloroplast envelope
pt2_06721	A	A1S	Potri.002G169200	Potri.002G169200(AS)	POPTR_0002s17050	sp|Q7SYK0|CHID1_DANRE	Chitinase domain-containing protein 1 OS=Danio rerio GN=chid1 PE=2 SV=1	AT4G01040.1	| Symbols: | Glycosyl hydrolase superfamily protein | chr4:453383-455407 FORWARD LENGTH=430	LOC_Os01g43220.1	protein|chitinase domain-containing protein 1 precursor, putative, expressed	IMGA|Medtr5g025480.1	Chitinase domain-containing protein chr5 10086352-10091434 E EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0004568|chitinase activity GO:0043169|cation binding	GO:0005783|endoplasmic reticulum
pt2_06722	A	A1S	Potri.002G169300	Potri.002G169300(AS)	POPTR_0002s17060	NA	NA	AT4G01037.1	| Symbols: WTF1, AtWTF1 | Ubiquitin carboxyl-terminal hydrolase family protein | chr4:451444-453030 REVERSE LENGTH=528	LOC_Os05g49610.1	protein|ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed	IMGA|Medtr1g072550.1	hypothetical protein chr1 18188103-18185295 E EGN_Mt100125 20111014	NA	NA	GO:0005576|extracellular region
pt2_06723	A	A1S	Potri.002G169400	Potri.002G169400(AS)	POPTR_0002s17070	sp|Q84MC7|PYL9_ARATH	Abscisic acid receptor PYL9 OS=Arabidopsis thaliana GN=PYL9 PE=1 SV=1	AT1G01360.1	| Symbols: RCAR1, PYL9 | regulatory component of ABA receptor 1 | chr1:142138-142914 FORWARD LENGTH=187	LOC_Os02g15640.1	protein|CAPIP1, putative, expressed	IMGA|Medtr5g083270.1	Abscisic acid receptor PYL6 chr5 34938236-34936695 F EGN_Mt100125 20111014	GO:0009738|abscisic acid mediated signaling pathway	GO:0004872|receptor activity GO:0005515|protein binding GO:0010427|abscisic acid binding	GO:0005634|nucleus
pt2_06724	A	A1S	Potri.002G169600	Potri.002G169600(AS)	POPTR_0002s17080	NA	NA	AT3G61680.1	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr3:22824630-22826926 FORWARD LENGTH=649	LOC_Os01g43140.1	protein|lipase, putative, expressed	NA	NA	GO:0006629|lipid metabolic process	GO:0004806|triglyceride lipase activity	NA
pt2_06725	A	A1S	Potri.002G169700	Potri.002G169700(AS)	POPTR_0002s17090	NA	NA	AT3G61690.1	| Symbols: | nucleotidyltransferases | chr3:22828349-22833477 FORWARD LENGTH=1303	LOC_Os03g11240.1	protein|nucleotidyltransferase, putative, expressed	IMGA|Medtr5g075280.1	Poly(A) RNA polymerase cid14 chr5 30981546-30975982 E EGN_Mt100125 20111014	GO:0000226|microtubule cytoskeleton organization	GO:0016779|nucleotidyltransferase activity	GO:0005634|nucleus
pt2_06726	A	A1S	Potri.002G169800	Potri.002G169800(AS)	POPTR_0002s17100	sp|Q9FFQ1|RH31_ARATH	DEAD-box ATP-dependent RNA helicase 31 OS=Arabidopsis thaliana GN=RH31 PE=2 SV=2	AT5G63630.1	| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:25472598-25476402 REVERSE LENGTH=788	LOC_Os01g43120.1	protein|DEAD/DEAH box helicase, putative, expressed	IMGA|contig_83207_1.1	ATP-dependent RNA helicase contig_83207 17-1570 H PREDN 20111014	GO:0009220|pyrimidine ribonucleotide biosynthetic process	GO:0003676|nucleic acid binding GO:0004386|helicase activity GO:0005524|ATP binding GO:0008026|ATP-dependent helicase activity	GO:0009507|chloroplast
pt2_06727	A	A1S	Potri.002G169900	Potri.002G169900(AS)	POPTR_0002s17110	NA	NA	AT2G46420.2	| Symbols: | Plant protein 1589 of unknown function | chr2:19054891-19056645 FORWARD LENGTH=345	LOC_Os01g12080.1	protein|plant-specific domain TIGR01589 family protein, putative, expressed	IMGA|contig_82829_1.1	"plant-specific domain TIGR01589 family protein, putative" contig_82829 173-862 H PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06728	A	A1S	Potri.002G170000	Potri.002G170000(AS)	POPTR_0002s17120	sp|Q9LNJ0|CNG10_ARATH	Probable cyclic nucleotide-gated ion channel 10 OS=Arabidopsis thaliana GN=CNGC10 PE=2 SV=2	AT1G01340.2	| Symbols: CNGC10 | cyclic nucleotide gated channel 10 | chr1:132414-135216 REVERSE LENGTH=711	LOC_Os06g33570.1	protein|cyclic nucleotide-gated ion channel 1, putative, expressed	IMGA|Medtr1g064240.1	CNGC5-like protein chr1 16479213-16483284 H EGN_Mt100125 20111014	GO:0006811|ion transport GO:0055085|transmembrane transport	GO:0005216|ion channel activity GO:0005516|calmodulin binding GO:0030551|cyclic nucleotide binding	GO:0005886|plasma membrane GO:0016020|membrane
pt2_06729	A	A1S	Potri.002G170100	Potri.002G170100(AS)	POPTR_0002s17130	sp|Q9M367|BECN1_ARATH	Beclin-1-like protein OS=Arabidopsis thaliana GN=At3g61710 PE=2 SV=2	AT3G61710.1	| Symbols: ATATG6, ATG6, BECLIN1, AtBECLIN1 | AUTOPHAGY 6 | chr3:22839477-22842253 REVERSE LENGTH=517	LOC_Os01g48920.1	protein|beclin-1, putative, expressed	NA	NA	GO:0000045|autophagic vacuole assembly GO:0006623|protein targeting to vacuole GO:0006914|autophagy GO:0009845|seed germination GO:0009846|pollen germination GO:0050832|defense response to fungus	GO:0003674|molecular_function	GO:0000407|pre-autophagosomal structure GO:0005634|nucleus GO:0009507|chloroplast
pt2_06730	A	A1S	Potri.002G170200	Potri.002G170200(AS)	POPTR_0002s17140	NA	NA	AT4G01000.1	| Symbols: | Ubiquitin-like superfamily protein | chr4:432186-433727 REVERSE LENGTH=415	LOC_Os01g48930.2	protein|splicing factor-related, putative, expressed	NA	NA	NA	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_06731	A	A1S	Potri.002G170300	Potri.002G170300(AS)	POPTR_0002s17150	sp|P0CH01|AT21A_ARATH	Putative RING-H2 finger protein ATL21A OS=Arabidopsis thaliana GN=ATL21A PE=3 SV=1	AT2G46495.1	| Symbols: | RING/U-box superfamily protein | chr2:19084134-19085704 REVERSE LENGTH=372	LOC_Os12g42540.1	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr5g009190.1	RING-H2 zinc finger protein chr5 1905375-1903724 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0008270|zinc ion binding	GO:0005576|extracellular region
pt2_06732	A	A1S	Potri.002G170400	Potri.002G170400(AS)	POPTR_0002s17160	sp|Q9M365|FB331_ARATH	Probable F-box protein At3g61730 OS=Arabidopsis thaliana GN=RMF PE=1 SV=2	AT3G61730.1	| Symbols: RMF | reduced male fertility | chr3:22848427-22850475 REVERSE LENGTH=354	LOC_Os01g11990.1	protein|expressed protein	NA	NA	GO:0048658|tapetal layer development GO:0055046|microgametogenesis	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_06733	C	C1S	Potri.002G170400	Potri.002G170400(CS)	sp|Q9M365|FB331_ARATH	Probable F-box protein At3g61730 OS=Arabidopsis thaliana GN=RMF PE=1 SV=2	AT3G61730.1	| Symbols: RMF | reduced male fertility | chr3:22848427-22850475 REVERSE LENGTH=354	LOC_Os01g11990.1	protein|expressed protein	NA	NA	GO:0048658|tapetal layer development GO:0055046|microgametogenesis	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_06734	A	A2S	Potri.002G170600	Potri.002G170600(AS) Potri.014G098400(DS)	POPTR_0002s17180	sp|Q9M364|ATX3_ARATH	Histone-lysine N-methyltransferase ATX3 OS=Arabidopsis thaliana GN=ATX3 PE=2 SV=2	AT3G61740.2	| Symbols: SDG14, ATX3 | SET domain protein 14 | chr3:22851133-22856548 REVERSE LENGTH=982	LOC_Os01g11952.1	protein|histone-lysine N-methyltransferase ATX5, putative, expressed	IMGA|Medtr1g008250.1	Defensin-like protein chr1 1400619-1401059 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_06735	C	C1S	Potri.002G170700	Potri.002G170700(CS)	NA	NA	AT4G18230.1	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligosaccharide biosynthesis protein Alg14 like (InterPro:IPR013969); Has 640 Blast hits to 640 proteins in 277 species: Archae - 4; Bacteria - 281; Metazoa - 94; Fungi - 127; Plants - 57; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). | chr4:10080521-10081710 REVERSE LENGTH=233	LOC_Os03g30934.3	protein|UDP-N-acetylglucosamine transferase subunit ALG14, putative, expressed	IMGA|Medtr5g029710.1	hypothetical protein chr5 12250083-12251383 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_06736	A	A1S	Potri.002G170900	Potri.002G170900(AS)	POPTR_0002s17200	sp|O15818|K0664_DICDI	Protein KIAA0664 homolog OS=Dictyostelium discoideum GN=cluA PE=1 SV=2	AT1G01320.2	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:121582-130099 REVERSE LENGTH=1787	LOC_Os07g23990.1	protein|tetratricopeptide repeat domain containing protein, putative, expressed	NA	NA	GO:0016556|mRNA modification	NA	GO:0005737|cytoplasm
pt2_06737	G	G1	NA	NA	POPTR_0002s17210	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06738	A	A1S	Potri.002G171200	Potri.002G171200(AS)	POPTR_0002s17220	sp|Q84XF3|DRP1B_ARATH	Dynamin-related protein 1B OS=Arabidopsis thaliana GN=DRP1B PE=2 SV=1	AT3G61760.1	| Symbols: ADL1B, DL1B | DYNAMIN-like 1B | chr3:22860546-22864092 REVERSE LENGTH=610	LOC_Os05g48240.1	protein|dynamin family protein, putative, expressed	IMGA|Medtr5g009150.1	Dynamin-related protein 1A chr5 1886432-1881144 H EGN_Mt100125 20111014	NA	GO:0003924|GTPase activity GO:0005525|GTP binding	GO:0005737|cytoplasm
pt2_06739	A	A1S	Potri.002G171300	Potri.002G171300(AS)	POPTR_0002s17230	sp|O32107|YUID_BACSU	Uncharacterized membrane protein yuiD OS=Bacillus subtilis (strain 168) GN=yuiD PE=4 SV=1	AT3G61770.1	| Symbols: | Acid phosphatase/vanadium-dependent haloperoxidase-related protein | chr3:22864635-22866248 FORWARD LENGTH=284	LOC_Os05g45770.1	protein|Divergent PAP2 family domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005886|plasma membrane
pt2_06740	A	A1S	Potri.002G171400	Potri.002G171400(AS)	POPTR_0002s17240	NA	NA	AT1G64460.1	| Symbols: | Protein kinase superfamily protein | chr1:23943688-23944680 REVERSE LENGTH=301	NA	NA	NA	NA	NA	GO:0016773|phosphotransferase activity, alcohol group as acceptor	GO:0005634|nucleus GO:0005773|vacuole
pt2_06741	A	A1S	Potri.002G171500	Potri.002G171500(AS)	POPTR_0002s17250	sp|Q84JL3|SINA3_ARATH	E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana GN=SINAT3 PE=2 SV=1	AT3G61790.1	| Symbols: | Protein with RING/U-box and TRAF-like domains | chr3:22871974-22873543 REVERSE LENGTH=326	LOC_Os02g19140.1	protein|seven in absentia protein family domain containing protein, expressed	IMGA|Medtr5g076660.1	Ubiquitin chr5 31709811-31712540 H EGN_Mt100125 20111014	GO:0006511|ubiquitin-dependent protein catabolic process GO:0007275|multicellular organismal development GO:0016567|protein ubiquitination	GO:0004842|ubiquitin-protein ligase activity GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_06742	A	A1S	Potri.002G171600	Potri.002G171600(AS)	POPTR_0002s17260	sp|Q9M358|UVSSA_ARATH	UV-stimulated scaffold protein A homolog OS=Arabidopsis thaliana GN=At3g61800 PE=3 SV=1	AT3G61800.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2043 (InterPro:IPR018610), ENTH/VHS (InterPro:IPR008942); Has 308 Blast hits to 279 proteins in 95 species: Archae - 2; Bacteria - 30; Metazoa - 120; Fungi - 19; Plants - 44; Viruses - 2; Other Eukaryotes - 91 (source: NCBI BLink). | chr3:22874723-22876846 REVERSE LENGTH=664	LOC_Os02g19170.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_06743	A	A1S	Potri.002G171700	Potri.002G171700(AS)	POPTR_0002s17270	sp|Q9LS40|ASPG1_ARATH	Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1	AT1G01300.1	| Symbols: | Eukaryotic aspartyl protease family protein | chr1:117065-118522 FORWARD LENGTH=485	LOC_Os01g41550.1	protein|aspartic proteinase, putative, expressed	IMGA|contig_51649_1.1	Aspartic proteinase nepenthesin-1 contig_51649 769-2767 E PREDN 20111014	GO:0006508|proteolysis GO:0009664|plant-type cell wall organization GO:0042545|cell wall modification GO:0080167|response to karrikin	GO:0004190|aspartic-type endopeptidase activity	GO:0005576|extracellular region GO:0009505|plant-type cell wall GO:0016020|membrane
pt2_06744	A	A1S	Potri.002G171800	Potri.002G171800(AS)	POPTR_0002s17280	sp|P24465|C71A1_PERAE	Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=2	AT1G01280.1	| Symbols: CYP703A2, CYP703 | cytochrome P450, family 703, subfamily A, polypeptide 2 | chr1:112290-113905 FORWARD LENGTH=510	LOC_Os08g03682.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g021390.1	Cytochrome P450 chr5 8001998-8005410 F EGN_Mt100125 20111014	GO:0010208|pollen wall assembly GO:0010584|pollen exine formation GO:0051791|medium-chain fatty acid metabolic process GO:0051792|medium-chain fatty acid biosynthetic process GO:0055114|oxidation-reduction process GO:0080110|sporopollenin biosynthetic process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0016709|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen GO:0019825|oxygen binding GO:0020037|heme binding	NA
pt2_06745	A	A1S	Potri.002G171900	Potri.002G171900(AS)	POPTR_0002s17290	sp|O65155|KELP_ARATH	RNA polymerase II transcriptional coactivator KELP OS=Arabidopsis thaliana GN=KELP PE=1 SV=1	AT4G00980.1	| Symbols: | zinc knuckle (CCHC-type) family protein | chr4:422732-424580 REVERSE LENGTH=488	LOC_Os01g50960.1	protein|RNA polymerase II transcriptional coactivator KELP, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003676|nucleic acid binding GO:0008270|zinc ion binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06746	A	A1S	Potri.002G172000	Potri.002G172000(AS)	POPTR_0002s17300	NA	NA	AT3G49250.1	| Symbols: DMS3, IDN1 | defective in meristem silencing 3 | chr3:18258613-18260803 REVERSE LENGTH=420	LOC_Os01g13404.1	protein|ATP binding protein, putative, expressed	NA	NA	GO:0000724|double-strand break repair via homologous recombination GO:0006261|DNA-dependent DNA replication GO:0006275|regulation of DNA replication GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0007267|cell-cell signaling GO:0009555|pollen development GO:0009616|virus induced gene silencing GO:0010267|production of ta-siRNAs involved in RNA interference GO:0016444|somatic cell DNA recombination GO:0016568|chromatin modification GO:0016569|covalent chromatin modification GO:0031047|gene silencing by RNA GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0051567|histone H3-K9 methylation GO:0051726|regulation of cell cycle	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_06747	A	A1S	Potri.002G172100	Potri.002G172100(AS)	POPTR_0002s17310	sp|Q9ZPY8|AIB_ARATH	Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis thaliana GN=AIB PE=2 SV=2	AT2G46510.1	| Symbols: ATAIB, AIB | ABA-inducible BHLH-type transcription factor | chr2:19091187-19092887 REVERSE LENGTH=566	LOC_Os01g13460.1	protein|helix-loop-helix DNA-binding domain containing protein, expressed	IMGA|Medtr5g030430.1	BHLH transcription factor chr5 12542132-12544882 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009694|jasmonic acid metabolic process GO:0009753|response to jasmonic acid stimulus	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_06748	B	B2S	Potri.002G172300	Potri.002G172300(BS) Potri.002G172600(BS)	POPTR_0002s17320	sp|Q1ECI2|ERF23_ARATH	Ethylene-responsive transcription factor ERF023 OS=Arabidopsis thaliana GN=ERF023 PE=2 SV=1	AT1G01250.1	| Symbols: | Integrase-type DNA-binding superfamily protein | chr1:104731-105309 REVERSE LENGTH=192	LOC_Os04g46400.1	protein|AP2 domain containing protein, expressed	IMGA|Medtr5g012910.1	Ethylene-responsive transcription factor TINY chr5 3739805-3739260 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009737|response to abscisic acid stimulus	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_06749	A	A3S	Potri.002G172200	Potri.002G172200(AS) Potri.002G172300(AS) Potri.002G172600(BS)	POPTR_0002s17330	sp|Q1ECI2|ERF23_ARATH	Ethylene-responsive transcription factor ERF023 OS=Arabidopsis thaliana GN=ERF023 PE=2 SV=1	AT1G01250.1	| Symbols: | Integrase-type DNA-binding superfamily protein | chr1:104731-105309 REVERSE LENGTH=192	LOC_Os04g46400.1	protein|AP2 domain containing protein, expressed	IMGA|Medtr5g012910.1	Ethylene-responsive transcription factor TINY chr5 3739805-3739260 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009737|response to abscisic acid stimulus	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_06750	A	A2S	Potri.002G172700	Potri.002G172700(AS) Potri.002G172400(AS)	POPTR_0002s17340	sp|Q9ZPY7|XPO2_ARATH	Exportin-2 OS=Arabidopsis thaliana GN=CAS PE=1 SV=1	AT2G46520.1	| Symbols: | cellular apoptosis susceptibility protein, putative / importin-alpha re-exporter, putative | chr2:19096867-19099785 FORWARD LENGTH=972	LOC_Os01g13430.1	protein|importin-alpha re-exporter, putative, expressed	NA	NA	GO:0000059|protein import into nucleus, docking GO:0006094|gluconeogenesis GO:0006886|intracellular protein transport GO:0007010|cytoskeleton organization GO:0009611|response to wounding GO:0009620|response to fungus GO:0009694|jasmonic acid metabolic process GO:0009695|jasmonic acid biosynthetic process GO:0009753|response to jasmonic acid stimulus GO:0010498|proteasomal protein catabolic process	GO:0008565|protein transporter activity	GO:0005634|nucleus GO:0005643|nuclear pore GO:0005737|cytoplasm GO:0005829|cytosol GO:0009506|plasmodesma GO:0009507|chloroplast GO:0016020|membrane
pt2_06751	A	A3S	Potri.002G172500	Potri.002G172500(AS) Potri.002G172800(AS) Potri.014G100100(DS)	POPTR_0002s17350	sp|Q9C5W9|ARFR_ARATH	Auxin response factor 18 OS=Arabidopsis thaliana GN=ARF18 PE=2 SV=1	AT3G61830.1	| Symbols: ARF18 | auxin response factor 18 | chr3:22888171-22891179 FORWARD LENGTH=602	LOC_Os02g35140.1	protein|auxin response factor 7, putative, expressed	IMGA|Medtr5g076270.1	Auxin response factor chr5 31499972-31490689 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009725|response to hormone stimulus	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0046983|protein dimerization activity	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_06752	A	A1S	Potri.002G172800	Potri.002G172800(AS)	POPTR_0002s17350	sp|Q6YVY0|ARFG_ORYSJ	Auxin response factor 7 OS=Oryza sativa subsp. japonica GN=ARF7 PE=2 SV=1	AT1G59750.3	| Symbols: ARF1 | auxin response factor 1 | chr1:21980414-21984193 FORWARD LENGTH=665	LOC_Os02g35140.1	protein|auxin response factor 7, putative, expressed	IMGA|Medtr5g076270.1	Auxin response factor chr5 31499972-31490689 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009725|response to hormone stimulus	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0046983|protein dimerization activity	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_06753	A	A1S	Potri.002G172800	Potri.002G172800(AS)	POPTR_0002s17350	sp|Q6YVY0|ARFG_ORYSJ	Auxin response factor 7 OS=Oryza sativa subsp. japonica GN=ARF7 PE=2 SV=1	AT1G59750.3	| Symbols: ARF1 | auxin response factor 1 | chr1:21980414-21984193 FORWARD LENGTH=665	LOC_Os02g35140.1	protein|auxin response factor 7, putative, expressed	IMGA|Medtr5g076270.1	Auxin response factor chr5 31499972-31490689 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009725|response to hormone stimulus	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0046983|protein dimerization activity	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_06754	A	A1S	Potri.002G172500	Potri.002G172500(AS)	POPTR_0002s17360	sp|Q9C5W9|ARFR_ARATH	Auxin response factor 18 OS=Arabidopsis thaliana GN=ARF18 PE=2 SV=1	AT3G61830.1	| Symbols: ARF18 | auxin response factor 18 | chr3:22888171-22891179 FORWARD LENGTH=602	LOC_Os02g35140.1	protein|auxin response factor 7, putative, expressed	IMGA|Medtr5g076270.1	Auxin response factor chr5 31499972-31490689 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009725|response to hormone stimulus	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0046983|protein dimerization activity	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_06755	A	A1S	Potri.002G172900	Potri.002G172900(AS)	POPTR_0002s17370	sp|Q9M160|Y4095_ARATH	Uncharacterized protein At4g00950 OS=Arabidopsis thaliana GN=At4g00950 PE=2 SV=1	AT4G00950.1	| Symbols: MEE47 | Protein of unknown function (DUF688) | chr4:405984-407087 REVERSE LENGTH=291	NA	NA	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0009793|embryo development ending in seed dormancy	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06756	B	B1S	Potri.002G173100	Potri.002G173100(BS)	POPTR_0002s17380	NA	NA	AT2G46540.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; Has 42 Blast hits to 42 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:19110687-19111681 REVERSE LENGTH=65	LOC_Os05g46450.1	protein|fiber protein Fb11, putative, expressed	IMGA|contig_163064_1.1	Fiber protein Fb11 contig_163064 2130-485 F PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0016020|membrane
pt2_06757	A	A1S	Potri.002G173200	Potri.002G173200(AS)	POPTR_0002s17390	NA	NA	AT2G46550.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G01240.3); Has 72 Blast hits to 68 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:19112264-19113457 REVERSE LENGTH=397	LOC_Os08g30930.1	protein|expressed protein	IMGA|Medtr1g007840.2	hypothetical protein chr1 1160950-1162405 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_06758	A	A1S	Potri.002G173300	Potri.002G173300(AS)	POPTR_0002s17400	sp|Q6PNC0|DMXL1_MOUSE	DmX-like protein 1 OS=Mus musculus GN=Dmxl1 PE=1 SV=1	AT2G46560.1	| Symbols: | transducin family protein / WD-40 repeat family protein | chr2:19115570-19125856 REVERSE LENGTH=2513	LOC_Os01g37120.1	protein|WD domain, G-beta repeat domain containing protein, expressed	NA	NA	GO:0000226|microtubule cytoskeleton organization	GO:0000166|nucleotide binding	GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_06759	A	A1S	Potri.002G173400	Potri.002G173400(AS)	POPTR_0002s17410	sp|A0JM23|NPHP3_XENTR	Nephrocystin-3 OS=Xenopus tropicalis GN=nphp3 PE=2 SV=2	AT4G10840.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:6656614-6659033 FORWARD LENGTH=609	LOC_Os02g01960.1	protein|tetratricopeptide repeat domain containing protein, expressed	NA	NA	NA	NA	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_06760	A	A1S	Potri.002G173400	Potri.002G173400(AS)	POPTR_0002s17420	sp|A0JM23|NPHP3_XENTR	Nephrocystin-3 OS=Xenopus tropicalis GN=nphp3 PE=2 SV=2	AT4G10840.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:6656614-6659033 FORWARD LENGTH=609	LOC_Os02g01960.1	protein|tetratricopeptide repeat domain containing protein, expressed	NA	NA	NA	NA	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_06761	A	A2S	Potri.002G173600	Potri.002G173600(AS) Potri.014G100500(DS)	POPTR_0002s17430	NA	NA	AT4G09510.1	| Symbols: CINV2 | cytosolic invertase 2 | chr4:6021312-6023310 REVERSE LENGTH=558	LOC_Os02g34560.1	protein|plant neutral invertase domain containing protein, expressed	IMGA|Medtr1g084610.1	Neutral invertase chr1 22187365-22183276 E EGN_Mt100125 20111014	GO:0005987|sucrose catabolic process GO:0010075|regulation of meristem growth GO:0048364|root development	GO:0003824|catalytic activity GO:0004564|beta-fructofuranosidase activity	GO:0005634|nucleus GO:0005829|cytosol
pt2_06762	A	A1S	Potri.002G173700	Potri.002G173700(AS)	POPTR_0002s17440	NA	NA	AT4G10810.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G24026.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr4:6645986-6646231 REVERSE LENGTH=81	LOC_Os02g58010.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_06763	A	A2S	Potri.002G173800	Potri.002G173800(AS) Potri.014G100700(DS)	POPTR_0002s17450	NA	NA	AT2G46580.1	| Symbols: | Pyridoxamine 5'-phosphate oxidase family protein | chr2:19129409-19130513 REVERSE LENGTH=198	LOC_Os03g02450.1	protein|pyridoxamine 5'-phosphate oxidase family protein, putative, expressed	NA	NA	GO:0008615|pyridoxine biosynthetic process GO:0055114|oxidation-reduction process	GO:0004733|pyridoxamine-phosphate oxidase activity GO:0010181|FMN binding GO:0016491|oxidoreductase activity	NA
pt2_06764	A	A1S	Potri.002G173900	Potri.002G173900(AS)	POPTR_0002s17460	sp|Q38850|MYB5_ARATH	Transcription repressor MYB5 OS=Arabidopsis thaliana GN=MYB5 PE=1 SV=1	AT3G13540.1	| Symbols: ATMYB5, MYB5 | myb domain protein 5 | chr3:4420239-4421443 FORWARD LENGTH=249	LOC_Os05g35500.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr5g079670.1	Myb-like transcription factor chr5 33056957-33055245 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009611|response to wounding GO:0009651|response to salt stress GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009739|response to gibberellin stimulus GO:0009751|response to salicylic acid stimulus GO:0009753|response to jasmonic acid stimulus GO:0009800|cinnamic acid biosynthetic process GO:0009892|negative regulation of metabolic process GO:0046686|response to cadmium ion	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_06765	A	A1S	Potri.002G174100	Potri.002G174100(AS)	POPTR_0002s17470	sp|Q498F0|WDR44_XENLA	WD repeat-containing protein 44 OS=Xenopus laevis GN=wdr44 PE=2 SV=1	AT5G53500.1	| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr5:21726167-21728524 REVERSE LENGTH=654	LOC_Os03g02440.2	protein|WD repeat-containing protein 44, putative, expressed	IMGA|Medtr5g090420.1	WD-repeat protein-like protein chr5 38334682-38338889 E EGN_Mt100125 20111014	GO:0007165|signal transduction	GO:0004871|signal transducer activity	GO:0005737|cytoplasm GO:0005834|heterotrimeric G-protein complex
pt2_06766	A	A1S	Potri.002G174200	Potri.002G174200(AS)	POPTR_0002s17480	sp|Q9ZW07|PUM1_ARATH	Pumilio homolog 1 OS=Arabidopsis thaliana GN=APUM1 PE=2 SV=1	AT2G29200.1	| Symbols: APUM1, PUM1 | pumilio 1 | chr2:12549483-12553185 REVERSE LENGTH=968	LOC_Os05g01910.1	protein|pumilio-family RNA binding protein, putative, expressed	IMGA|Medtr5g080390.1	Pumilio-like protein chr5 33399353-33406744 H EGN_Mt100125 20111014	NA	GO:0003723|RNA binding GO:0003729|mRNA binding	GO:0005737|cytoplasm
pt2_06767	A	A1S	Potri.002G174300	Potri.002G174300(AS)	POPTR_0002s17490	sp|Q43385|DOF37_ARATH	Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana GN=DOF3.7 PE=1 SV=2	AT3G61850.4	| Symbols: DAG1 | Dof-type zinc finger DNA-binding family protein | chr3:22895495-22897150 FORWARD LENGTH=324	LOC_Os04g47990.2	protein|dof zinc finger domain containing protein, putative, expressed	IMGA|Medtr5g031440.1	Dof zinc finger protein chr5 13054757-13055767 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009639|response to red or far red light GO:0009845|seed germination	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_06768	A	A1S	Potri.002G174400	Potri.002G174400(AS)	POPTR_0002s17500	sp|O42901|YBA9_SCHPO	Uncharacterized protein C119.09c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC119.09c PE=2 SV=3	AT1G01230.1	| Symbols: | ORMDL family protein | chr1:97620-99046 FORWARD LENGTH=157	LOC_Os07g26940.1	protein|ORM1, putative, expressed	IMGA|contig_9619_1.1	ORMDL family protein-like protein contig_9619 1209-2156 E PREDN 20111014	GO:0006457|protein folding GO:0006661|phosphatidylinositol biosynthetic process GO:0010286|heat acclimation	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0005783|endoplasmic reticulum GO:0016021|integral to membrane
pt2_06769	R	R	NA	NA	POPTR_0002s17510	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06770	A	A1S	Potri.002G174600	Potri.002G174600(AS)	POPTR_0002s17520	sp|O23086|ALMTA_ARATH	Aluminum-activated malate transporter 10 OS=Arabidopsis thaliana GN=ALMT10 PE=2 SV=2	AT4G00910.1	| Symbols: | Aluminium activated malate transporter family protein | chr4:389370-391287 REVERSE LENGTH=497	LOC_Os02g45160.1	protein|aluminum-activated malate transporter, putative, expressed	IMGA|Medtr5g014310.1	hypothetical protein chr5 4526352-4523171 H EGN_Mt100125 20111014	GO:0010044|response to aluminum ion	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_06771	A	A1S	Potri.002G174700	Potri.002G174700(AS)	POPTR_0002s17530	NA	NA	AT1G01225.1	| Symbols: | NC domain-containing protein-related | chr1:96064-97242 FORWARD LENGTH=260	LOC_Os08g43350.1	protein|NC domain-containing protein, putative, expressed	IMGA|Medtr5g076250.1	hypothetical protein chr5 31479317-31483800 F EGN_Mt100125 20111014	GO:0010089|xylem development GO:0044036|cell wall macromolecule metabolic process	NA	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06772	C	C1S	Potri.002G174800	Potri.002G174800(CS)	sp|Q9LNJ9|FKGP_ARATH	Bifunctional fucokinase/fucose pyrophosphorylase OS=Arabidopsis thaliana GN=FKGP PE=1 SV=2	AT1G01220.1	| Symbols: FKGP, AtFKGP | L-fucokinase/GDP-L-fucose pyrophosphorylase | chr1:91750-95552 FORWARD LENGTH=1055	LOC_Os03g02410.3	protein|GHMP kinases ATP-binding protein, putative, expressed	NA	NA	GO:0008152|metabolic process GO:0030244|cellulose biosynthetic process GO:0042352|GDP-L-fucose salvage GO:0048193|Golgi vesicle transport	GO:0004335|galactokinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0016773|phosphotransferase activity, alcohol group as acceptor GO:0047341|fucose-1-phosphate guanylyltransferase activity GO:0050201|fucokinase activity	GO:0005737|cytoplasm
pt2_06773	A	A1S	Potri.002G174900	Potri.002G174900(AS)	POPTR_0002s17550	sp|Q9ZPX9|KIC_ARATH	Calcium-binding protein KIC OS=Arabidopsis thaliana GN=KIC PE=1 SV=2	AT2G46600.1	| Symbols: | Calcium-binding EF-hand family protein | chr2:19136070-19136477 FORWARD LENGTH=135	LOC_Os02g03020.1	protein|EF hand family protein, putative, expressed	NA	NA	GO:0010091|trichome branching GO:0042744|hydrogen peroxide catabolic process	GO:0005509|calcium ion binding GO:0005515|protein binding	GO:0005634|nucleus
pt2_06774	A	A2S	Potri.002G175000	Potri.002G175000(AS) Potri.014G101800(DS)	POPTR_0002s17560	sp|P92964|RSP31_ARATH	Arginine/serine-rich-splicing factor RSP31 OS=Arabidopsis thaliana GN=RSP31 PE=1 SV=2	AT3G61860.1	| Symbols: ATRSP31, RSP31, At-RS31, RS31 | RNA-binding (RRM/RBD/RNP motifs) family protein | chr3:22900311-22902159 REVERSE LENGTH=264	LOC_Os04g02870.3	protein|RNA recognition motif containing protein, putative, expressed	IMGA|Medtr1g101520.1	Arginine/serine-rich-splicing factor RSP40 chr1 30031048-30026916 E EGN_Mt100125 20111014	GO:0000398|mRNA splicing, via spliceosome GO:0006355|regulation of transcription, DNA-dependent GO:0008150|biological_process GO:0008380|RNA splicing GO:0030422|production of siRNA involved in RNA interference GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0043687|post-translational protein modification GO:0045893|positive regulation of transcription, DNA-dependent	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005575|cellular_component GO:0005634|nucleus GO:0005681|spliceosomal complex GO:0005737|cytoplasm GO:0016607|nuclear speck
pt2_06775	A	A2S	Potri.002G175200	Potri.002G175200(AS) Potri.014G102700(DS)	POPTR_0002s17570	sp|O48927|C78A3_SOYBN	Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=2 SV=1	AT2G46660.1	| Symbols: CYP78A6 | cytochrome P450, family 78, subfamily A, polypeptide 6 | chr2:19153602-19155417 REVERSE LENGTH=530	LOC_Os08g43390.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g045250.1	Cytochrome P450 78A11 chr5 19442194-19440472 E EGN_Mt100125 20111014	GO:0048316|seed development	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0009507|chloroplast
pt2_06776	B	B1S	Potri.002G175300	Potri.002G175300(BS)	POPTR_0002s17580	NA	NA	AT2G46640.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; Has 26 Blast hits to 26 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | chr2:19148792-19150751 FORWARD LENGTH=281	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06777	A	A1S	Potri.002G175400	Potri.002G175400(AS)	POPTR_0002s17590	NA	NA	AT2G46630.1	| Symbols: | unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 110095 Blast hits to 59224 proteins in 2216 species: Archae - 177; Bacteria - 15429; Metazoa - 38345; Fungi - 18843; Plants - 13341; Viruses - 3084; Other Eukaryotes - 20876 (source: NCBI BLink). | chr2:19145529-19146713 FORWARD LENGTH=394	NA	NA	NA	NA	NA	NA	GO:0005634|nucleus
pt2_06778	A	A1S	Potri.002G175500	Potri.002G175500(AS)	POPTR_0002s17600	NA	NA	AT3G61870.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 200 Blast hits to 200 proteins in 73 species: Archae - 0; Bacteria - 112; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). | chr3:22902702-22903895 FORWARD LENGTH=272	LOC_Os02g03010.1	protein|expressed protein	NA	NA	GO:0006098|pentose-phosphate shunt GO:0006364|rRNA processing GO:0008150|biological_process GO:0009657|plastid organization GO:0010027|thylakoid membrane organization GO:0010207|photosystem II assembly GO:0015995|chlorophyll biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009706|chloroplast inner membrane GO:0009941|chloroplast envelope
pt2_06779	A	A1S	Potri.002G175600	Potri.002G175600(AS)	POPTR_0002s17610	sp|Q9P6Q3|BCS1_SCHPO	Probable mitochondrial chaperone bcs1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC644.07 PE=2 SV=1	AT2G46620.1	| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr2:19139071-19140546 REVERSE LENGTH=491	LOC_Os03g02330.1	protein|AAA-type ATPase family protein, putative, expressed	IMGA|contig_49719_2.1	Cell division protease ftsH homolog contig_49719 4035-5762 E PREDN 20111014	GO:0009693|ethylene biosynthetic process	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity	GO:0005886|plasma membrane
pt2_06780	A	A1S	Potri.002G175700	Potri.002G175700(AS)	POPTR_0002s17620	sp|Q9LNK1|RABA3_ARATH	Ras-related protein RABA3 OS=Arabidopsis thaliana GN=RABA3 PE=2 SV=1	AT1G01200.1	| Symbols: ATRABA3, ATRAB-A3, RABA3 | RAB GTPase homolog A3 | chr1:86715-88145 REVERSE LENGTH=237	LOC_Os09g35860.1	protein|ras-related protein, putative, expressed	IMGA|contig_80534_1.1	Ras-related protein Rab-25 contig_80534 213-2592 E PREDN 20111014	GO:0007264|small GTPase mediated signal transduction GO:0015031|protein transport	GO:0005525|GTP binding	GO:0005634|nucleus GO:0005768|endosome GO:0009504|cell plate
pt2_06781	A	A1S	Potri.002G175800	Potri.002G175800(AS)	POPTR_0002s17630	sp|Q9SFX2|PUB43_ARATH	U-box domain-containing protein 43 OS=Arabidopsis thaliana GN=PUB43 PE=2 SV=1	AT1G76390.2	| Symbols: | ARM repeat superfamily protein | chr1:28655914-28658531 FORWARD LENGTH=811	LOC_Os01g72000.1	protein|armadillo repeat-containing protein, putative, expressed	IMGA|contig_56658_1.1	U-box domain-containing protein contig_56658 130-4641 F PREDN 20111014	GO:0010115|regulation of abscisic acid biosynthetic process GO:0010150|leaf senescence GO:0010271|regulation of chlorophyll catabolic process GO:0010380|regulation of chlorophyll biosynthetic process GO:0016567|protein ubiquitination GO:0090359|negative regulation of abscisic acid biosynthetic process	GO:0004842|ubiquitin-protein ligase activity GO:0005515|protein binding GO:0070696|transmembrane receptor protein serine/threonine kinase binding	GO:0000151|ubiquitin ligase complex GO:0005634|nucleus GO:0005737|cytoplasm GO:0005886|plasma membrane
pt2_06782	A	A1S	Potri.002G175900	Potri.002G175900(AS)	POPTR_0002s17640	sp|Q9FNN7|PP371_ARATH	Pentatricopeptide repeat-containing protein At5g08510 OS=Arabidopsis thaliana GN=PCMP-E20 PE=2 SV=1	AT5G08510.1	| Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr5:2753099-2754731 FORWARD LENGTH=511	LOC_Os06g03570.2	protein|pentatricopeptide, putative, expressed	IMGA|contig_53197_3.1	Pentatricopeptide repeat protein contig_53197 10365-8485 H PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_06783	A	A1S	Potri.002G176000	Potri.002G176000(AS)	POPTR_0002s17650	sp|Q8CCF0|PRP31_MOUSE	U4/U6 small nuclear ribonucleoprotein Prp31 OS=Mus musculus GN=Prpf31 PE=2 SV=3	AT1G60170.1	| Symbols: emb1220 | pre-mRNA processing ribonucleoprotein binding region-containing protein | chr1:22193008-22195177 FORWARD LENGTH=485	LOC_Os07g04850.2	protein|pre-mRNA-processing factor 31, putative, expressed	IMGA|Medtr5g010260.2	SAR DNA-binding protein-1 chr5 2466924-2463754 F EGN_Mt100125 20111014	GO:0009793|embryo development ending in seed dormancy	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_06784	A	A1S	Potri.002G176100	Potri.002G176100(AS)	POPTR_0002s17660	sp|P0C8A0|PP275_ARATH	Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana GN=At3g49730 PE=2 SV=1	AT3G49730.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:18445730-18447646 REVERSE LENGTH=638	LOC_Os03g51840.1	protein|PPR repeat containing protein, expressed	IMGA|Medtr1g108270.1	Pentatricopeptide repeat-containing protein chr1 31811104-31809581 H EGN_Mt100125 20111014	NA	NA	GO:0005739|mitochondrion
pt2_06785	A	A1S	Potri.002G176200	Potri.002G176200(AS)	POPTR_0002s17670	sp|Q9FZ45|Y1686_ARATH	Uncharacterized membrane protein At1g16860 OS=Arabidopsis thaliana GN=At1g16860 PE=1 SV=1	AT4G22290.1	| Symbols: | Ubiquitin-specific protease family C19-related protein | chr4:11783199-11785730 REVERSE LENGTH=445	LOC_Os04g45821.1	protein|expressed protein	NA	NA	GO:0006511|ubiquitin-dependent protein catabolic process	GO:0004221|ubiquitin thiolesterase activity	NA
pt2_06786	A	A1S	Potri.002G176300	Potri.002G176300(AS)	POPTR_0002s17680	sp|P46897|ATHB7_ARATH	Homeobox-leucine zipper protein ATHB-7 OS=Arabidopsis thaliana GN=ATHB-7 PE=2 SV=2	AT2G46680.1	| Symbols: ATHB-7, ATHB7, HB-7 | homeobox 7 | chr2:19165777-19166773 REVERSE LENGTH=258	LOC_Os09g35910.1	protein|homeobox associated leucine zipper, putative, expressed	IMGA|contig_53935_2.1	Unknown protein contig_53935 3120-583 F PREDN 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0042538|hyperosmotic salinity response GO:0045893|positive regulation of transcription, DNA-dependent	GO:0000976|transcription regulatory region sequence-specific DNA binding GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_06787	B	B3S	Potri.001G284900	Potri.001G284900(BS) Potri.008G209400(BS) Potri.004G168300(DS)	POPTR_0002s17690	NA	NA	AT5G28950.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 448 Blast hits to 446 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 21; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:10992505-10993435 FORWARD LENGTH=148	LOC_Os05g28600.1	protein|transposon protein, putative, CACTA, En/Spm sub-class	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06788	A	A2S	Potri.002G176400	Potri.002G176400(AS) Potri.014G103300(DS)	POPTR_0002s17700	NA	NA	AT2G46690.1	| Symbols: | SAUR-like auxin-responsive protein family | chr2:19180904-19181269 FORWARD LENGTH=121	LOC_Os10g36703.1	protein|CPuORF40 - conserved peptide uORF-containing transcript, expressed	IMGA|Medtr5g008370.1	Auxin-induced protein-like protein chr5 1519989-1518903 H EGN_Mt100125 20111014	GO:0006816|calcium ion transport GO:0009733|response to auxin stimulus	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_06789	A	A2S	Potri.002G176600	Potri.002G176600(AS) Potri.002G176500(BS)	POPTR_0002s17705	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06790	A	A1S	Potri.002G176700	Potri.002G176700(AS)	POPTR_0002s17720	sp|P53681|CRK_DAUCA	CDPK-related protein kinase OS=Daucus carota GN=CRK PE=2 SV=1	AT2G46700.1	| Symbols: ATCRK3, CRK3 | CDPK-related kinase 3 | chr2:19182968-19186430 REVERSE LENGTH=595	LOC_Os06g50030.1	protein|CAMK_CAMK_like.30 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	IMGA|Medtr5g017830.1	CDPK-related protein kinase chr5 6337402-6332737 E EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0010150|leaf senescence GO:0046777|protein autophosphorylation	GO:0004674|protein serine/threonine kinase activity GO:0004723|calcium-dependent protein serine/threonine phosphatase activity GO:0005509|calcium ion binding GO:0005515|protein binding GO:0005516|calmodulin binding GO:0016301|kinase activity	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_06791	A	A1S	Potri.002G176800	Potri.002G176800(AS)	POPTR_0002s17740	sp|Q54Y72|GACA_DICDI	Rho GTPase-activating protein gacA OS=Dictyostelium discoideum GN=gacA PE=3 SV=1	AT2G46710.1	| Symbols: | Rho GTPase activating protein with PAK-box/P21-Rho-binding domain | chr2:19192105-19194656 FORWARD LENGTH=455	LOC_Os02g45600.1	protein|rhoGAP domain containing protein, expressed	IMGA|Medtr1g089500.1	Rac GTPase activating protein chr1 24542001-24545026 H EGN_Mt100125 20111014	GO:0009664|plant-type cell wall organization GO:0009926|auxin polar transport GO:0010218|response to far red light GO:0048765|root hair cell differentiation	GO:0030675|Rac GTPase activator activity	GO:0005737|cytoplasm GO:0005886|plasma membrane GO:0009531|secondary cell wall
pt2_06792	A	A2S	Potri.002G176900	Potri.002G176900(AS) Potri.014G103700(DS)	POPTR_0002s17750	sp|O49687|BH004_ARATH	Transcription factor MYC4 OS=Arabidopsis thaliana GN=BHLH4 PE=2 SV=1	AT4G17880.1	| Symbols: | Basic helix-loop-helix (bHLH) DNA-binding family protein | chr4:9933702-9935471 REVERSE LENGTH=589	LOC_Os10g42430.1	protein|transcription factor MYC7E, putative, expressed	IMGA|Medtr5g030430.1	BHLH transcription factor chr5 12542132-12544882 E EGN_Mt100125 20111014	GO:0006568|tryptophan metabolic process GO:0006612|protein targeting to membrane GO:0009269|response to desiccation GO:0009611|response to wounding GO:0009620|response to fungus GO:0009694|jasmonic acid metabolic process GO:0009695|jasmonic acid biosynthetic process GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009753|response to jasmonic acid stimulus GO:0009759|indole glucosinolate biosynthetic process GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010200|response to chitin GO:0010363|regulation of plant-type hypersensitive response GO:0043069|negative regulation of programmed cell death GO:0043619|regulation of transcription from RNA polymerase II promoter in response to oxidative stress GO:0045893|positive regulation of transcription, DNA-dependent GO:0048364|root development GO:0051090|regulation of sequence-specific DNA binding transcription factor activity GO:2000068|regulation of defense response to insect	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_06793	A	A1S	Potri.002G177000	Potri.002G177000(AS)	POPTR_0002s17760	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_06794	A	A1S	Potri.002G177100	Potri.002G177100(AS)	POPTR_0002s17770	NA	NA	AT5G65960.1	| Symbols: | GTP binding | chr5:26385413-26387197 FORWARD LENGTH=393	LOC_Os04g49530.1	protein|expressed protein	NA	NA	GO:0007264|small GTPase mediated signal transduction	GO:0005525|GTP binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_06795	A	A1S	Potri.002G177200	Potri.002G177200(AS)	POPTR_0002s17780	sp|Q9LFF1|PP281_ARATH	Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1	AT3G53700.1	| Symbols: MEE40 | Pentatricopeptide repeat (PPR) superfamily protein | chr3:19900303-19902567 FORWARD LENGTH=754	LOC_Os03g40020.1	protein|PPR repeat containing protein, expressed	NA	NA	GO:0009793|embryo development ending in seed dormancy GO:0010027|thylakoid membrane organization GO:0010228|vegetative to reproductive phase transition of meristem GO:0016226|iron-sulfur cluster assembly GO:0048481|ovule development	NA	GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_06796	A	A1S	Potri.002G177300	Potri.002G177300(AS)	POPTR_0002s17790	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005794|Golgi apparatus
pt2_06797	A	A1S	Potri.002G177400	Potri.002G177400(AS)	POPTR_0002s17800	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06798	A	A1S	Potri.002G177500	Potri.002G177500(AS)	POPTR_0002s17810	NA	NA	AT1G01180.1	| Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr1:75633-76556 FORWARD LENGTH=307	LOC_Os09g34320.1	protein|expressed protein	NA	NA	GO:0008610|lipid biosynthetic process	GO:0008168|methyltransferase activity	NA
pt2_06799	A	A2S	Potri.002G177600	Potri.002G177600(AS) Potri.014G103900(DS)	POPTR_0002s17820	NA	NA	AT4G00850.1	| Symbols: GIF3 | GRF1-interacting factor 3 | chr4:357675-358928 FORWARD LENGTH=223	LOC_Os12g31350.1	protein|SSXT protein, putative, expressed	IMGA|Medtr1g080590.1	Calcium-responsive transactivator chr1 20410927-20412716 E EGN_Mt100125 20111014	GO:0008283|cell proliferation GO:0048366|leaf development	GO:0003713|transcription coactivator activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_06800	A	A1S	Potri.002G177700	Potri.002G177700(AS)	POPTR_0002s17830	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06801	A	A2S	Potri.002G177900	Potri.002G177900(AS) Potri.014G104200(DS)	POPTR_0002s17840	sp|Q9MAM1|CIPK9_ARATH	CBL-interacting serine/threonine-protein kinase 9 OS=Arabidopsis thaliana GN=CIPK9 PE=1 SV=2	AT1G01140.1	| Symbols: CIPK9, SnRK3.12, PKS6 | CBL-interacting protein kinase 9 | chr1:64398-67512 REVERSE LENGTH=447	LOC_Os03g03510.1	protein|CAMK_KIN1/SNF1/Nim1_like.15 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	IMGA|Medtr5g088350.2	CBL-interacting protein kinase chr5 37310696-37305753 F EGN_Mt100125 20111014	GO:0009409|response to cold GO:0009611|response to wounding GO:0009651|response to salt stress GO:0010555|response to mannitol stimulus GO:0043266|regulation of potassium ion transport GO:0051365|cellular response to potassium ion starvation GO:0055075|potassium ion homeostasis	GO:0005515|protein binding GO:0016301|kinase activity	GO:0005737|cytoplasm GO:0005886|plasma membrane
pt2_06802	A	A1S	Potri.002G177900	Potri.002G177900(AS)	POPTR_0002s17850	sp|Q9MAM1|CIPK9_ARATH	CBL-interacting serine/threonine-protein kinase 9 OS=Arabidopsis thaliana GN=CIPK9 PE=1 SV=2	AT1G01140.1	| Symbols: CIPK9, SnRK3.12, PKS6 | CBL-interacting protein kinase 9 | chr1:64398-67512 REVERSE LENGTH=447	LOC_Os03g03510.1	protein|CAMK_KIN1/SNF1/Nim1_like.15 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	IMGA|Medtr5g088350.2	CBL-interacting protein kinase chr5 37310696-37305753 F EGN_Mt100125 20111014	GO:0009409|response to cold GO:0009611|response to wounding GO:0009651|response to salt stress GO:0010555|response to mannitol stimulus GO:0043266|regulation of potassium ion transport GO:0051365|cellular response to potassium ion starvation GO:0055075|potassium ion homeostasis	GO:0005515|protein binding GO:0016301|kinase activity	GO:0005737|cytoplasm GO:0005886|plasma membrane
pt2_06803	A	A2S	Potri.002G178000	Potri.002G178000(AS) Potri.014G104300(DS)	POPTR_0002s17860	sp|Q9MAM3|KCS1_ARATH	3-ketoacyl-CoA synthase 1 OS=Arabidopsis thaliana GN=KCS1 PE=2 SV=1	AT1G01120.1	| Symbols: KCS1 | 3-ketoacyl-CoA synthase 1 | chr1:57392-58978 REVERSE LENGTH=528	LOC_Os03g14170.1	protein|3-ketoacyl-CoA synthase, putative, expressed	IMGA|Medtr5g056510.1	3-ketoacyl-CoA synthase chr5 22730882-22729392 H EGN_Mt100125 20111014	GO:0000038|very long-chain fatty acid metabolic process GO:0006633|fatty acid biosynthetic process GO:0008152|metabolic process GO:0008610|lipid biosynthetic process GO:0009409|response to cold GO:0009416|response to light stimulus GO:0009611|response to wounding GO:0009805|coumarin biosynthetic process GO:0010025|wax biosynthetic process GO:0030497|fatty acid elongation GO:0042335|cuticle development	GO:0003824|catalytic activity GO:0009922|fatty acid elongase activity GO:0016746|transferase activity, transferring acyl groups GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0005783|endoplasmic reticulum GO:0016020|membrane GO:0022626|cytosolic ribosome
pt2_06804	A	A1S	Potri.002G178100	Potri.002G178100(AS)	POPTR_0002s17870	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_06805	A	A2S	Potri.002G178200	Potri.002G178200(AS) Potri.014G104500(DS)	POPTR_0002s17880	sp|Q7TP47|HNRPQ_RAT	Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus GN=Syncrip PE=2 SV=1	AT4G00830.2	| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr4:352782-354965 FORWARD LENGTH=495	LOC_Os10g06130.2	protein|RNA recognition motif containing protein, expressed	IMGA|Medtr5g017280.1	RNA-binding protein chr5 6036476-6040612 E EGN_Mt100125 20111014	GO:0006635|fatty acid beta-oxidation GO:0008150|biological_process GO:0010048|vernalization response GO:0016558|protein import into peroxisome matrix GO:0048573|photoperiodism, flowering	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol
pt2_06806	C	C1S	Potri.002G178200	Potri.002G178200(CS)	sp|Q7TP47|HNRPQ_RAT	Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus GN=Syncrip PE=2 SV=1	AT4G00830.2	| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr4:352782-354965 FORWARD LENGTH=495	LOC_Os10g06130.2	protein|RNA recognition motif containing protein, expressed	IMGA|Medtr5g017280.1	RNA-binding protein chr5 6036476-6040612 E EGN_Mt100125 20111014	GO:0006635|fatty acid beta-oxidation GO:0008150|biological_process GO:0010048|vernalization response GO:0016558|protein import into peroxisome matrix GO:0048573|photoperiodism, flowering	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol
pt2_06807	A	A2S	Potri.002G178300	Potri.002G178300(AS) Potri.002G178400(BS)	POPTR_0002s17900	sp|P58710|GGLO_MOUSE	L-gulonolactone oxidase OS=Mus musculus GN=Gulo PE=1 SV=3	AT2G46760.1	| Symbols: | D-arabinono-1,4-lactone oxidase family protein | chr2:19213028-19215166 REVERSE LENGTH=603	LOC_Os03g36530.1	protein|FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed	IMGA|Medtr5g005540.1	hypothetical protein chr5 257180-252967 E EGN_Mt100125 20111014	GO:0010014|meristem initiation GO:0010089|xylem development GO:0044036|cell wall macromolecule metabolic process GO:0055114|oxidation-reduction process	GO:0003824|catalytic activity GO:0003885|D-arabinono-1,4-lactone oxidase activity GO:0008762|UDP-N-acetylmuramate dehydrogenase activity GO:0016491|oxidoreductase activity GO:0016614|oxidoreductase activity, acting on CH-OH group of donors GO:0050660|flavin adenine dinucleotide binding	GO:0005576|extracellular region GO:0016020|membrane
pt2_06808	B	B7S	Potri.001G196200	Potri.001G196200(BS) Potri.004G114700(BS) Potri.015G049300(BS) Potri.006G151700(BS) Potri.004G126200(BS) Potri.018G052800(BS) Potri.004G053900(DS)	POPTR_0002s17905	NA	NA	AT5G33406.1	| Symbols: | hAT dimerisation domain-containing protein / transposase-related | chr5:12676126-12678403 REVERSE LENGTH=509	LOC_Os12g35220.1	protein|transposon protein, putative, Ac/Ds sub-class, expressed	IMGA|Medtr5g012510.1	hypothetical protein chr5 3512350-3509693 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003677|DNA binding GO:0046983|protein dimerization activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06809	B	B2S	Potri.002G178400	Potri.002G178400(BS) Potri.002G178300(DS)	POPTR_0002s17910	sp|P58710|GGLO_MOUSE	L-gulonolactone oxidase OS=Mus musculus GN=Gulo PE=1 SV=3	AT2G46760.1	| Symbols: | D-arabinono-1,4-lactone oxidase family protein | chr2:19213028-19215166 REVERSE LENGTH=603	LOC_Os03g36530.1	protein|FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed	IMGA|Medtr5g005540.1	hypothetical protein chr5 257180-252967 E EGN_Mt100125 20111014	GO:0010014|meristem initiation GO:0010089|xylem development GO:0044036|cell wall macromolecule metabolic process GO:0055114|oxidation-reduction process	GO:0003824|catalytic activity GO:0003885|D-arabinono-1,4-lactone oxidase activity GO:0008762|UDP-N-acetylmuramate dehydrogenase activity GO:0016491|oxidoreductase activity GO:0016614|oxidoreductase activity, acting on CH-OH group of donors GO:0050660|flavin adenine dinucleotide binding	GO:0005576|extracellular region GO:0016020|membrane
pt2_06810	C	C1S	Potri.002G178400	Potri.002G178400(CS)	sp|P58710|GGLO_MOUSE	L-gulonolactone oxidase OS=Mus musculus GN=Gulo PE=1 SV=3	AT2G46760.1	| Symbols: | D-arabinono-1,4-lactone oxidase family protein | chr2:19213028-19215166 REVERSE LENGTH=603	LOC_Os03g36530.1	protein|FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed	IMGA|Medtr5g005540.1	hypothetical protein chr5 257180-252967 E EGN_Mt100125 20111014	GO:0010014|meristem initiation GO:0010089|xylem development GO:0044036|cell wall macromolecule metabolic process GO:0055114|oxidation-reduction process	GO:0003824|catalytic activity GO:0003885|D-arabinono-1,4-lactone oxidase activity GO:0008762|UDP-N-acetylmuramate dehydrogenase activity GO:0016491|oxidoreductase activity GO:0016614|oxidoreductase activity, acting on CH-OH group of donors GO:0050660|flavin adenine dinucleotide binding	GO:0005576|extracellular region GO:0016020|membrane
pt2_06811	A	A1S	Potri.002G178500	Potri.002G178500(AS)	POPTR_0002s17930	sp|Q9SF32|IQD1_ARATH	Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana GN=IQD1 PE=1 SV=1	AT4G00820.1	| Symbols: iqd17 | IQ-domain 17 | chr4:349300-351307 FORWARD LENGTH=534	LOC_Os08g02250.1	protein|IQ calmodulin-binding motif domain containing protein, expressed	IMGA|Medtr1g095740.1	IQ domain-containing protein chr1 27488331-27490594 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0005516|calmodulin binding	GO:0005634|nucleus
pt2_06812	A	A1S	Potri.002G178600	Potri.002G178600(AS)	POPTR_0002s17940	sp|O04905|UMPK_ARATH	UMP/CMP kinase OS=Arabidopsis thaliana GN=PYR6 PE=1 SV=1	AT5G26667.3	| Symbols: PYR6 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:9276659-9278091 FORWARD LENGTH=202	LOC_Os02g53790.1	protein|adenylate kinase, putative, expressed	IMGA|Medtr5g068940.1	Adenylate kinase chr5 28195242-28191227 F EGN_Mt100125 20111014	GO:0006139|nucleobase-containing compound metabolic process GO:0009173|pyrimidine ribonucleoside monophosphate metabolic process GO:0046939|nucleotide phosphorylation	GO:0004127|cytidylate kinase activity GO:0005524|ATP binding GO:0009041|uridylate kinase activity GO:0016776|phosphotransferase activity, phosphate group as acceptor GO:0019201|nucleotide kinase activity GO:0019205|nucleobase-containing compound kinase activity	GO:0005737|cytoplasm GO:0005829|cytosol GO:0048046|apoplast
pt2_06813	A	A1S	Potri.002G178700	Potri.002G178700(AS)	POPTR_0002s17950	sp|Q84WP6|NAC43_ARATH	NAC domain-containing protein 43 OS=Arabidopsis thaliana GN=NAC043 PE=2 SV=2	AT2G46770.1	| Symbols: NST1, EMB2301, ANAC043 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein | chr2:19220917-19222822 REVERSE LENGTH=365	LOC_Os08g02300.1	protein|no apical meristem protein, putative, expressed	IMGA|Medtr5g021710.1	NAC domain protein chr5 8192612-8195394 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0007275|multicellular organismal development GO:0009793|embryo development ending in seed dormancy GO:0009809|lignin biosynthetic process GO:0009901|anther dehiscence GO:0010047|fruit dehiscence GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06814	A	A1S	Potri.002G178800	Potri.002G178800(AS)	POPTR_0002s17960	sp|A4GYT6|CLPP_POPTR	ATP-dependent Clp protease proteolytic subunit OS=Populus trichocarpa GN=clpP PE=3 SV=1	ATCG00670.1	| Symbols: CLPP1, PCLPP | plastid-encoded CLP P | chrC:69910-71882 REVERSE LENGTH=196	LOC_Os12g10590.1	protein|OsClp13 - Putative Clp protease homologue, expressed	IMGA|Medtr1g086940.1	ATP-dependent Clp protease proteolytic subunit chr1 23268149-23273759 F EGN_Mt100125 20111014	GO:0006091|generation of precursor metabolites and energy GO:0006354|DNA-dependent transcription, elongation GO:0006508|proteolysis GO:0015979|photosynthesis	GO:0004252|serine-type endopeptidase activity GO:0008236|serine-type peptidase activity	GO:0005737|cytoplasm GO:0009507|chloroplast GO:0009532|plastid stroma GO:0009535|chloroplast thylakoid membrane GO:0009570|chloroplast stroma GO:0009840|chloroplastic endopeptidase Clp complex GO:0009941|chloroplast envelope
pt2_06815	A	A1S	Potri.002G178900	Potri.002G178900(AS)	POPTR_0002s17970	NA	NA	AT3G61920.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot, hypocotyl, root, egg cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64700.1); Has 77 Blast hits to 77 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:22932638-22933201 REVERSE LENGTH=187	NA	NA	NA	NA	GO:0006499|N-terminal protein myristoylation	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06816	A	A1S	Potri.002G179000	Potri.002G179000(AS)	POPTR_0002s17980	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006499|N-terminal protein myristoylation	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_06817	A	A1S	Potri.002G179100	Potri.002G179100(AS)	POPTR_0002s17990	sp|Q9H0Z9|RBM38_HUMAN	RNA-binding protein 38 OS=Homo sapiens GN=RBM38 PE=1 SV=2	AT2G46780.1	| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr2:19229516-19231043 FORWARD LENGTH=336	LOC_Os01g65550.2	protein|RNA recognition motif containing protein, putative, expressed	IMGA|Medtr5g064120.1	RNA-binding protein chr5 25902597-25908008 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_06818	A	A1S	Potri.002G179300	Potri.002G179300(AS)	POPTR_0002s18000	sp|Q9SYK1|PPR11_ARATH	Pentatricopeptide repeat-containing protein At1g05600 OS=Arabidopsis thaliana GN=At1g05600 PE=2 SV=1	AT1G05600.2	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:1672161-1673675 FORWARD LENGTH=504	LOC_Os07g14530.3	protein|PPR repeat containing protein, expressed	IMGA|Medtr5g048070.1	Pentatricopeptide repeat-containing protein chr5 20637668-20639842 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_06819	A	A1S	Potri.002G179300	Potri.002G179300(AS)	POPTR_0002s18000	sp|Q9SYK1|PPR11_ARATH	Pentatricopeptide repeat-containing protein At1g05600 OS=Arabidopsis thaliana GN=At1g05600 PE=2 SV=1	AT1G05600.2	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:1672161-1673675 FORWARD LENGTH=504	LOC_Os07g14530.3	protein|PPR repeat containing protein, expressed	IMGA|Medtr5g048070.1	Pentatricopeptide repeat-containing protein chr5 20637668-20639842 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_06820	A	A1S	Potri.002G179400	Potri.002G179400(AS)	POPTR_0002s18010	sp|P52855|RLA1_MAIZE	60S acidic ribosomal protein P1 OS=Zea mays GN=RPP1A PE=1 SV=1	AT5G24510.1	| Symbols: | 60S acidic ribosomal protein family | chr5:8369295-8369866 REVERSE LENGTH=111	LOC_Os08g02340.2	protein|60S acidic ribosomal protein, putative, expressed	NA	NA	GO:0006414|translational elongation	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005737|cytoplasm GO:0005840|ribosome GO:0022626|cytosolic ribosome
pt2_06821	A	A1S	Potri.002G179500	Potri.002G179500(AS)	POPTR_0002s18020	sp|Q1XDM0|ODPA_PORYE	Pyruvate dehydrogenase E1 component subunit alpha OS=Porphyra yezoensis GN=pdhA PE=3 SV=1	AT1G01090.1	| Symbols: PDH-E1 ALPHA | pyruvate dehydrogenase E1 alpha | chr1:47705-49166 REVERSE LENGTH=428	LOC_Os04g02900.1	protein|dehydrogenase E1 component domain containing protein, expressed	IMGA|Medtr5g036600.1	Pyruvate dehydrogenase E1 component alpha subunit chr5 15561806-15555291 F EGN_Mt100125 20111014	GO:0006096|glycolysis GO:0008152|metabolic process GO:0055114|oxidation-reduction process	GO:0004739|pyruvate dehydrogenase (acetyl-transferring) activity GO:0016624|oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009536|plastid GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope GO:0043231|intracellular membrane-bounded organelle
pt2_06822	A	A1S	Potri.002G179600	Potri.002G179600(AS)	POPTR_0002s18030	sp|Q8L838|COG4_ARATH	Conserved oligomeric Golgi complex subunit 4 OS=Arabidopsis thaliana GN=COG4 PE=2 SV=1	AT4G01400.2	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167); Has 465 Blast hits to 425 proteins in 199 species: Archae - 0; Bacteria - 3; Metazoa - 153; Fungi - 166; Plants - 45; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink). | chr4:573098-575648 REVERSE LENGTH=738	LOC_Os02g25840.1	protein|conserved oligomeric Golgi complex component 4, related, putative, expressed	NA	NA	GO:0006944|cellular membrane fusion GO:0008150|biological_process GO:0048193|Golgi vesicle transport	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0005794|Golgi apparatus GO:0005829|cytosol
pt2_06823	C	C1S	Potri.002G179700	Potri.002G179700(CS)	NA	NA	AT1G01080.2	| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr1:45503-46789 REVERSE LENGTH=294	NA	NA	NA	NA	GO:0006655|phosphatidylglycerol biosynthetic process GO:0008150|biological_process GO:0010103|stomatal complex morphogenesis GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005634|nucleus GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope
pt2_06824	A	A1S	Potri.002G179800	Potri.002G179800(AS)	POPTR_0002s18050	sp|Q689G6|PRR95_ORYSJ	Two-component response regulator-like PRR95 OS=Oryza sativa subsp. japonica GN=PRR95 PE=2 SV=1	AT5G24470.1	| Symbols: APRR5, PRR5 | pseudo-response regulator 5 | chr5:8356204-8358873 REVERSE LENGTH=667	LOC_Os09g36220.2	protein|response regulator receiver domain containing protein, expressed	IMGA|contig_52261_1.1	Pseudo-response regulator 7b contig_52261 957-60 E PREDN 20111014	GO:0000160|two-component signal transduction system (phosphorelay) GO:0005982|starch metabolic process GO:0006355|regulation of transcription, DNA-dependent GO:0007623|circadian rhythm GO:0009639|response to red or far red light GO:0009640|photomorphogenesis GO:0010114|response to red light GO:0010218|response to far red light GO:0042752|regulation of circadian rhythm GO:0045892|negative regulation of transcription, DNA-dependent GO:0048574|long-day photoperiodism, flowering GO:0051170|nuclear import	GO:0000156|two-component response regulator activity GO:0003677|DNA binding	GO:0005634|nucleus
pt2_06825	A	A2S	Potri.002G179800	Potri.002G179800(AS) Potri.014G106000(DS)	POPTR_0002s18050	sp|Q689G6|PRR95_ORYSJ	Two-component response regulator-like PRR95 OS=Oryza sativa subsp. japonica GN=PRR95 PE=2 SV=1	AT5G24470.1	| Symbols: APRR5, PRR5 | pseudo-response regulator 5 | chr5:8356204-8358873 REVERSE LENGTH=667	LOC_Os09g36220.2	protein|response regulator receiver domain containing protein, expressed	IMGA|contig_52261_1.1	Pseudo-response regulator 7b contig_52261 957-60 E PREDN 20111014	GO:0000160|two-component signal transduction system (phosphorelay) GO:0005982|starch metabolic process GO:0006355|regulation of transcription, DNA-dependent GO:0007623|circadian rhythm GO:0009639|response to red or far red light GO:0009640|photomorphogenesis GO:0010114|response to red light GO:0010218|response to far red light GO:0042752|regulation of circadian rhythm GO:0045892|negative regulation of transcription, DNA-dependent GO:0048574|long-day photoperiodism, flowering GO:0051170|nuclear import	GO:0000156|two-component response regulator activity GO:0003677|DNA binding	GO:0005634|nucleus
pt2_06826	A	A1S	Potri.002G179900	Potri.002G179900(AS)	POPTR_0002s18060	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06827	A	A3S	Potri.002G180000	Potri.002G180000(AS) Potri.T181400(AS) Potri.014G106100(DS)	POPTR_0002s18070	NA	NA	AT4G01410.1	| Symbols: | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | chr4:578308-578991 FORWARD LENGTH=227	LOC_Os05g30490.1	protein|harpin-induced protein 1 domain containing protein, expressed	IMGA|Medtr5g087760.1	Avr9/Cf-9 rapidly elicited protein chr5 37047795-37046557 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_06828	A	A1S	Potri.002G180100	Potri.002G180100(AS)	POPTR_0002s18080	sp|Q9ZT63|MTP1_ARATH	Metal tolerance protein 1 OS=Arabidopsis thaliana GN=MTP1 PE=1 SV=2	AT2G46800.2	| Symbols: ZAT, ATMTP1, MTP1, ZAT1, ATCDF1 | zinc transporter of Arabidopsis thaliana | chr2:19238128-19239324 FORWARD LENGTH=398	LOC_Os05g03780.1	protein|cation efflux family protein, putative, expressed	IMGA|AC229724_1040.1	Zinc ion transmembrane transporter AC229724.12 138846-135050 E EGN_Mt100125 20111014	GO:0006812|cation transport GO:0006829|zinc ion transport GO:0006882|cellular zinc ion homeostasis GO:0009062|fatty acid catabolic process GO:0010038|response to metal ion GO:0055085|transmembrane transport	GO:0005385|zinc ion transmembrane transporter activity GO:0008324|cation transmembrane transporter activity GO:0015103|inorganic anion transmembrane transporter activity GO:0046873|metal ion transmembrane transporter activity	GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0016021|integral to membrane
pt2_06829	G	G1	NA	NA	POPTR_0002s18090	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06830	A	A2S	Potri.002G180300	Potri.002G180300(AS) Potri.014G106300(DS)	POPTR_0002s18100	sp|O81037|BH070_ARATH	Transcription factor bHLH70 OS=Arabidopsis thaliana GN=BHLH70 PE=2 SV=1	AT2G46810.1	| Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr2:19239694-19242373 FORWARD LENGTH=371	LOC_Os10g23050.1	protein|helix-loop-helix DNA-binding protein, putative, expressed	IMGA|Medtr1g082480.1	Transcription factor bHLH94 chr1 21189984-21188661 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_06831	A	A1S	Potri.002G180400	Potri.002G180400(AS)	POPTR_0002s18110	sp|Q8LCA1|TMP14_ARATH	Thylakoid membrane phosphoprotein 14 kDa, chloroplastic OS=Arabidopsis thaliana GN=TMP14 PE=1 SV=2	AT2G46820.2	| Symbols: PTAC8, TMP14, PSAP, PSI-P | photosystem I P subunit | chr2:19243729-19244870 FORWARD LENGTH=174	LOC_Os07g28610.1	protein|expressed protein	NA	NA	GO:0006098|pentose-phosphate shunt GO:0006364|rRNA processing GO:0009657|plastid organization GO:0009737|response to abscisic acid stimulus GO:0009773|photosynthetic electron transport in photosystem I GO:0010027|thylakoid membrane organization GO:0010207|photosystem II assembly GO:0015979|photosynthesis GO:0019684|photosynthesis, light reaction GO:0035304|regulation of protein dephosphorylation	GO:0003677|DNA binding	GO:0009295|nucleoid GO:0009507|chloroplast GO:0009508|plastid chromosome GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009579|thylakoid GO:0009941|chloroplast envelope GO:0030093|chloroplast photosystem I
pt2_06832	A	A1S	Potri.002G180400	Potri.002G180400(AS)	POPTR_0002s18110	sp|Q8LCA1|TMP14_ARATH	Thylakoid membrane phosphoprotein 14 kDa, chloroplastic OS=Arabidopsis thaliana GN=TMP14 PE=1 SV=2	AT2G46820.2	| Symbols: PTAC8, TMP14, PSAP, PSI-P | photosystem I P subunit | chr2:19243729-19244870 FORWARD LENGTH=174	LOC_Os07g28610.1	protein|expressed protein	NA	NA	GO:0006098|pentose-phosphate shunt GO:0006364|rRNA processing GO:0009657|plastid organization GO:0009737|response to abscisic acid stimulus GO:0009773|photosynthetic electron transport in photosystem I GO:0010027|thylakoid membrane organization GO:0010207|photosystem II assembly GO:0015979|photosynthesis GO:0019684|photosynthesis, light reaction GO:0035304|regulation of protein dephosphorylation	GO:0003677|DNA binding	GO:0009295|nucleoid GO:0009507|chloroplast GO:0009508|plastid chromosome GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009579|thylakoid GO:0009941|chloroplast envelope GO:0030093|chloroplast photosystem I
pt2_06833	A	A1S	Potri.002G180400	Potri.002G180400(AS)	POPTR_0002s18110	sp|Q8LCA1|TMP14_ARATH	Thylakoid membrane phosphoprotein 14 kDa, chloroplastic OS=Arabidopsis thaliana GN=TMP14 PE=1 SV=2	AT2G46820.2	| Symbols: PTAC8, TMP14, PSAP, PSI-P | photosystem I P subunit | chr2:19243729-19244870 FORWARD LENGTH=174	LOC_Os07g28610.1	protein|expressed protein	NA	NA	GO:0006098|pentose-phosphate shunt GO:0006364|rRNA processing GO:0009657|plastid organization GO:0009737|response to abscisic acid stimulus GO:0009773|photosynthetic electron transport in photosystem I GO:0010027|thylakoid membrane organization GO:0010207|photosystem II assembly GO:0015979|photosynthesis GO:0019684|photosynthesis, light reaction GO:0035304|regulation of protein dephosphorylation	GO:0003677|DNA binding	GO:0009295|nucleoid GO:0009507|chloroplast GO:0009508|plastid chromosome GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009579|thylakoid GO:0009941|chloroplast envelope GO:0030093|chloroplast photosystem I
pt2_06834	A	A1S	Potri.002G180400	Potri.002G180400(AS)	POPTR_0002s18110	sp|Q8LCA1|TMP14_ARATH	Thylakoid membrane phosphoprotein 14 kDa, chloroplastic OS=Arabidopsis thaliana GN=TMP14 PE=1 SV=2	AT2G46820.2	| Symbols: PTAC8, TMP14, PSAP, PSI-P | photosystem I P subunit | chr2:19243729-19244870 FORWARD LENGTH=174	LOC_Os07g28610.1	protein|expressed protein	NA	NA	GO:0006098|pentose-phosphate shunt GO:0006364|rRNA processing GO:0009657|plastid organization GO:0009737|response to abscisic acid stimulus GO:0009773|photosynthetic electron transport in photosystem I GO:0010027|thylakoid membrane organization GO:0010207|photosystem II assembly GO:0015979|photosynthesis GO:0019684|photosynthesis, light reaction GO:0035304|regulation of protein dephosphorylation	GO:0003677|DNA binding	GO:0009295|nucleoid GO:0009507|chloroplast GO:0009508|plastid chromosome GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009579|thylakoid GO:0009941|chloroplast envelope GO:0030093|chloroplast photosystem I
pt2_06835	A	A1S	Potri.002G180400	Potri.002G180400(AS)	POPTR_0002s18110	sp|Q8LCA1|TMP14_ARATH	Thylakoid membrane phosphoprotein 14 kDa, chloroplastic OS=Arabidopsis thaliana GN=TMP14 PE=1 SV=2	AT2G46820.2	| Symbols: PTAC8, TMP14, PSAP, PSI-P | photosystem I P subunit | chr2:19243729-19244870 FORWARD LENGTH=174	LOC_Os07g28610.1	protein|expressed protein	NA	NA	GO:0006098|pentose-phosphate shunt GO:0006364|rRNA processing GO:0009657|plastid organization GO:0009737|response to abscisic acid stimulus GO:0009773|photosynthetic electron transport in photosystem I GO:0010027|thylakoid membrane organization GO:0010207|photosystem II assembly GO:0015979|photosynthesis GO:0019684|photosynthesis, light reaction GO:0035304|regulation of protein dephosphorylation	GO:0003677|DNA binding	GO:0009295|nucleoid GO:0009507|chloroplast GO:0009508|plastid chromosome GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009579|thylakoid GO:0009941|chloroplast envelope GO:0030093|chloroplast photosystem I
pt2_06836	A	A3S	Potri.002G180500	Potri.002G180500(AS) Potri.002G180600(BS) Potri.002G180700(DS)	POPTR_0002s18120	sp|Q43609|COMT1_PRUDU	Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1	AT5G54160.1	| Symbols: ATOMT1, OMT1 | O-methyltransferase 1 | chr5:21982075-21984167 FORWARD LENGTH=363	LOC_Os08g06100.1	protein|O-methyltransferase, putative, expressed	IMGA|Medtr5g098170.1	Caffeic acid 3-O-methyltransferase chr5 41960364-41963829 F EGN_Mt100125 20111014	GO:0006598|polyamine catabolic process GO:0009611|response to wounding GO:0009698|phenylpropanoid metabolic process GO:0009805|coumarin biosynthetic process GO:0009809|lignin biosynthetic process GO:0009963|positive regulation of flavonoid biosynthetic process GO:0016126|sterol biosynthetic process GO:0042398|cellular modified amino acid biosynthetic process GO:0051555|flavonol biosynthetic process	GO:0030744|luteolin O-methyltransferase activity GO:0030755|quercetin 3-O-methyltransferase activity GO:0033799|myricetin 3'-O-methyltransferase activity GO:0047763|caffeate O-methyltransferase activity	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_06837	A	A3S	Potri.002G180600	Potri.002G180600(AS) Potri.002G180500(BS) Potri.002G180700(BS)	POPTR_0002s18140	sp|Q43609|COMT1_PRUDU	Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1	AT5G54160.1	| Symbols: ATOMT1, OMT1 | O-methyltransferase 1 | chr5:21982075-21984167 FORWARD LENGTH=363	LOC_Os08g06100.1	protein|O-methyltransferase, putative, expressed	IMGA|Medtr5g098170.1	Caffeic acid 3-O-methyltransferase chr5 41960364-41963829 F EGN_Mt100125 20111014	GO:0006598|polyamine catabolic process GO:0009611|response to wounding GO:0009698|phenylpropanoid metabolic process GO:0009805|coumarin biosynthetic process GO:0009809|lignin biosynthetic process GO:0009963|positive regulation of flavonoid biosynthetic process GO:0016126|sterol biosynthetic process GO:0042398|cellular modified amino acid biosynthetic process GO:0051555|flavonol biosynthetic process	GO:0030744|luteolin O-methyltransferase activity GO:0030755|quercetin 3-O-methyltransferase activity GO:0033799|myricetin 3'-O-methyltransferase activity GO:0047763|caffeate O-methyltransferase activity	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_06838	A	A3S	Potri.002G180700	Potri.002G180700(AS) Potri.002G180600(BS) Potri.002G180500(DS)	POPTR_0002s18160	sp|Q43609|COMT1_PRUDU	Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1	AT5G54160.1	| Symbols: ATOMT1, OMT1 | O-methyltransferase 1 | chr5:21982075-21984167 FORWARD LENGTH=363	LOC_Os08g06100.1	protein|O-methyltransferase, putative, expressed	IMGA|Medtr5g098170.1	Caffeic acid 3-O-methyltransferase chr5 41960364-41963829 F EGN_Mt100125 20111014	GO:0006598|polyamine catabolic process GO:0009611|response to wounding GO:0009698|phenylpropanoid metabolic process GO:0009805|coumarin biosynthetic process GO:0009809|lignin biosynthetic process GO:0009963|positive regulation of flavonoid biosynthetic process GO:0016126|sterol biosynthetic process GO:0042398|cellular modified amino acid biosynthetic process GO:0051555|flavonol biosynthetic process	GO:0030744|luteolin O-methyltransferase activity GO:0030755|quercetin 3-O-methyltransferase activity GO:0033799|myricetin 3'-O-methyltransferase activity GO:0047763|caffeate O-methyltransferase activity	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_06839	C	C2S	Potri.002G180900	Potri.002G180900(CS) Potri.002G180800(CA)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06840	A	A2S	Potri.002G180800	Potri.002G180800(AS) Potri.014G106800(DS)	POPTR_0002s18190	sp|Q6R0H1|LHY_ARATH	Protein LHY OS=Arabidopsis thaliana GN=LHY PE=1 SV=2	AT1G01060.4	| Symbols: LHY, LHY1 | Homeodomain-like superfamily protein | chr1:33992-37061 REVERSE LENGTH=644	LOC_Os08g06110.2	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr5g076960.1	MYB transcription factor chr5 31832533-31829305 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0007623|circadian rhythm GO:0009409|response to cold GO:0009639|response to red or far red light GO:0009651|response to salt stress GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009739|response to gibberellin stimulus GO:0009751|response to salicylic acid stimulus GO:0009753|response to jasmonic acid stimulus GO:0042752|regulation of circadian rhythm GO:0042754|negative regulation of circadian rhythm GO:0043433|negative regulation of sequence-specific DNA binding transcription factor activity GO:0046686|response to cadmium ion GO:0048574|long-day photoperiodism, flowering	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0044212|transcription regulatory region DNA binding	GO:0005634|nucleus
pt2_06841	D	D1S	Potri.002G180800	Potri.002G180800(DS)	POPTR_0002s18190	sp|Q6R0H1|LHY_ARATH	Protein LHY OS=Arabidopsis thaliana GN=LHY PE=1 SV=2	AT1G01060.4	| Symbols: LHY, LHY1 | Homeodomain-like superfamily protein | chr1:33992-37061 REVERSE LENGTH=644	LOC_Os08g06110.2	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr5g076960.1	MYB transcription factor chr5 31832533-31829305 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0007623|circadian rhythm GO:0009409|response to cold GO:0009639|response to red or far red light GO:0009651|response to salt stress GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009739|response to gibberellin stimulus GO:0009751|response to salicylic acid stimulus GO:0009753|response to jasmonic acid stimulus GO:0042752|regulation of circadian rhythm GO:0042754|negative regulation of circadian rhythm GO:0043433|negative regulation of sequence-specific DNA binding transcription factor activity GO:0046686|response to cadmium ion GO:0048574|long-day photoperiodism, flowering	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0044212|transcription regulatory region DNA binding	GO:0005634|nucleus
pt2_06842	A	A1S	Potri.002G181000	Potri.002G181000(AS)	POPTR_0002s18200	sp|P87248|ATG1_COLLN	Serine/threonine-protein kinase ATG1 OS=Colletotrichum lindemuthianum GN=ATG1 PE=3 SV=1	AT3G61960.1	| Symbols: | Protein kinase superfamily protein | chr3:22941966-22944996 REVERSE LENGTH=626	LOC_Os03g16130.1	protein|CAMK_CAMK_like_ULKh_APGy.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	IMGA|Medtr5g088350.4	CBL-interacting protein kinase chr5 37310696-37305753 F EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus
pt2_06843	A	A1S	Potri.002G181100	Potri.002G181100(AS)	POPTR_0002s18210	sp|Q8S8N4|Y2685_ARATH	Probably inactive receptor-like protein kinase At2g46850 OS=Arabidopsis thaliana GN=At2g46850 PE=2 SV=1	AT2G46850.1	| Symbols: | Protein kinase superfamily protein | chr2:19251083-19253313 FORWARD LENGTH=633	LOC_Os10g21090.1	protein|ATP binding protein, putative, expressed	IMGA|Medtr5g018570.1	Kinase-like protein chr5 6674294-6679204 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0009507|chloroplast
pt2_06844	A	A1S	Potri.002G181200	Potri.002G181200(AS)	POPTR_0002s18220	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06845	A	A1S	Potri.002G181300	Potri.002G181300(AS)	POPTR_0002s18230	sp|Q43187|IPYR_SOLTU	Soluble inorganic pyrophosphatase OS=Solanum tuberosum GN=PPA PE=2 SV=1	AT1G01050.1	| Symbols: AtPPa1, PPa1 | pyrophosphorylase 1 | chr1:31382-32670 REVERSE LENGTH=212	LOC_Os04g59040.1	protein|soluble inorganic pyrophosphatase, putative, expressed	IMGA|Medtr1g068810.2	Soluble inorganic pyrophosphatase chr1 17097936-17101097 F EGN_Mt100125 20111014	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0008152|metabolic process GO:0009086|methionine biosynthetic process GO:0019915|lipid storage	GO:0000287|magnesium ion binding GO:0004427|inorganic diphosphatase activity	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol GO:0016020|membrane
pt2_06846	A	A1S	Potri.002G181400	Potri.002G181400(AS)	POPTR_0002s18240	sp|Q9SP32|DCL1_ARATH	Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana GN=DCL1 PE=1 SV=2	AT1G01040.1	| Symbols: DCL1, CAF, SUS1, SIN1, ASU1, EMB76, EMB60, ATDCL1 | dicer-like 1 | chr1:23519-31079 FORWARD LENGTH=1909	LOC_Os03g02970.1	protein|Dicer, putative, expressed	IMGA|contig_78618_1.1	Dicer-like protein contig_78618 1716-207 H PREDN 20111014	GO:0000226|microtubule cytoskeleton organization GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0006396|RNA processing GO:0007267|cell-cell signaling GO:0009616|virus induced gene silencing GO:0009630|gravitropism GO:0009880|embryonic pattern specification GO:0009908|flower development GO:0010050|vegetative phase change GO:0010098|suspensor development GO:0010228|vegetative to reproductive phase transition of meristem GO:0010267|production of ta-siRNAs involved in RNA interference GO:0010599|production of lsiRNA involved in RNA interference GO:0016569|covalent chromatin modification GO:0030422|production of siRNA involved in RNA interference GO:0031047|gene silencing by RNA GO:0031053|primary miRNA processing GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0035279|mRNA cleavage involved in gene silencing by miRNA GO:0051607|defense response to virus GO:2000034|regulation of seed maturation	GO:0003676|nucleic acid binding GO:0003677|DNA binding GO:0003723|RNA binding GO:0003725|double-stranded RNA binding GO:0004386|helicase activity GO:0004525|ribonuclease III activity GO:0005515|protein binding GO:0005524|ATP binding GO:0008026|ATP-dependent helicase activity GO:0016787|hydrolase activity GO:0016891|endoribonuclease activity, producing 5'-phosphomonoesters	GO:0005622|intracellular GO:0005634|nucleus GO:0010445|nuclear dicing body
pt2_06847	A	A1S	Potri.002G181500	Potri.002G181500(AS)	POPTR_0002s18250	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06848	A	A1S	Potri.002G181600	Potri.002G181600(AS)	POPTR_0002s18260	sp|O82799|NGA1_ARATH	B3 domain-containing transcription factor NGA1 OS=Arabidopsis thaliana GN=NGA1 PE=1 SV=1	AT2G46870.1	| Symbols: NGA1 | AP2/B3-like transcriptional factor family protein | chr2:19261313-19262245 FORWARD LENGTH=310	LOC_Os02g45850.1	protein|B3 DNA binding domain containing protein, expressed	IMGA|Medtr5g053920.1	AP2 domain-containing transcription factor chr5 21647649-21649266 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009908|flower development GO:0048366|leaf development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06849	A	A1S	Potri.002G181700	Potri.002G181700(AS)	POPTR_0002s18270	NA	NA	AT1G01020.1	| Symbols: ARV1 | Arv1-like protein | chr1:6915-8666 REVERSE LENGTH=245	LOC_Os03g57090.1	protein|arv1, putative, expressed	NA	NA	GO:0006665|sphingolipid metabolic process GO:0016125|sterol metabolic process	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0005783|endoplasmic reticulum GO:0016020|membrane
pt2_06850	A	A2S	Potri.002G181800	Potri.002G181800(AS) Potri.002G182100(DS)	POPTR_0002s18280	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06851	A	A2S	Potri.002G182000	Potri.002G182000(AS) Potri.002G182300(BS)	POPTR_0002s18290	sp|Q9M126|NAC69_ARATH	NAC domain-containing protein 69 OS=Arabidopsis thaliana GN=NAC69 PE=2 SV=1	AT4G35580.1	| Symbols: NTL9 | NAC transcription factor-like 9 | chr4:16888581-16890744 REVERSE LENGTH=512	LOC_Os06g01230.2	protein|no apical meristem protein, putative, expressed	IMGA|Medtr5g069030.2	NAC domain protein chr5 28228664-28232502 F EGN_Mt100125 20111014	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0006355|regulation of transcription, DNA-dependent GO:0006487|protein N-linked glycosylation GO:0008284|positive regulation of cell proliferation GO:0031347|regulation of defense response GO:0045892|negative regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0005516|calmodulin binding	GO:0005634|nucleus
pt2_06852	A	A2S	Potri.002G182100	Potri.002G182100(AS) Potri.002G181800(DS)	POPTR_0002s18300	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06853	A	A2S	Potri.002G182300	Potri.002G182300(AS) Potri.002G182000(BS)	POPTR_0002s18310	sp|Q9M126|NAC69_ARATH	NAC domain-containing protein 69 OS=Arabidopsis thaliana GN=NAC69 PE=2 SV=1	AT4G35580.1	| Symbols: NTL9 | NAC transcription factor-like 9 | chr4:16888581-16890744 REVERSE LENGTH=512	LOC_Os06g01230.2	protein|no apical meristem protein, putative, expressed	IMGA|Medtr5g069030.2	NAC domain protein chr5 28228664-28232502 F EGN_Mt100125 20111014	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0006355|regulation of transcription, DNA-dependent GO:0006487|protein N-linked glycosylation GO:0008284|positive regulation of cell proliferation GO:0031347|regulation of defense response GO:0045892|negative regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0005516|calmodulin binding	GO:0005634|nucleus
pt2_06854	A	A1S	Potri.002G182400	Potri.002G182400(AS)	POPTR_0002s18320	sp|O81913|NAC4_ARATH	NAC domain-containing protein 4 OS=Arabidopsis thaliana GN=NAC004 PE=2 SV=2	AT4G35580.3	| Symbols: NTL9 | NAC transcription factor-like 9 | chr4:16888534-16890744 REVERSE LENGTH=533	LOC_Os08g06140.1	protein|no apical meristem protein, putative, expressed	IMGA|Medtr5g069030.2	NAC domain protein chr5 28228664-28232502 F EGN_Mt100125 20111014	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0006355|regulation of transcription, DNA-dependent GO:0006487|protein N-linked glycosylation GO:0008284|positive regulation of cell proliferation GO:0031347|regulation of defense response GO:0045892|negative regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0005516|calmodulin binding	GO:0005634|nucleus
pt2_06855	A	A1S	Potri.002G182500	Potri.002G182500(AS)	POPTR_0002s18330	sp|O81916|YC22_ARATH	Uncharacterized calcium-binding protein At1g02270 OS=Arabidopsis thaliana GN=At1g02270 PE=2 SV=2	AT5G54130.2	| Symbols: | Calcium-binding endonuclease/exonuclease/phosphatase family | chr5:21962900-21965279 FORWARD LENGTH=436	LOC_Os10g13550.1	protein|endonuclease/exonuclease/phosphatase family domain containing protein, expressed	IMGA|Medtr5g068820.1	"Calcium-binding protein, putative" chr5 28169997-28172855 E EGN_Mt100125 20111014	GO:0009409|response to cold	GO:0003824|catalytic activity GO:0005509|calcium ion binding	GO:0005634|nucleus
pt2_06856	A	A1S	Potri.002G182600	Potri.002G182600(AS)	POPTR_0002s18340	sp|Q5RJS9|RPF1_RAT	Ribosome production factor 1 OS=Rattus norvegicus GN=Rpf1 PE=2 SV=2	AT4G01560.1	| Symbols: MEE49 | Ribosomal RNA processing Brix domain protein | chr4:677266-679164 REVERSE LENGTH=343	LOC_Os06g04600.2	protein|Brix domain containing protein, putative, expressed	NA	NA	GO:0006626|protein targeting to mitochondrion GO:0009640|photomorphogenesis GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009909|regulation of flower development GO:0009933|meristem structural organization GO:0010162|seed dormancy process GO:0010182|sugar mediated signaling pathway GO:0010228|vegetative to reproductive phase transition of meristem GO:0010564|regulation of cell cycle process GO:0016567|protein ubiquitination GO:0019915|lipid storage GO:0048366|leaf development GO:0048825|cotyledon development GO:0050826|response to freezing	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005829|cytosol
pt2_06857	A	A1S	Potri.002G182700	Potri.002G182700(AS)	POPTR_0002s18350	sp|Q6J163|5NG4_PINTA	Auxin-induced protein 5NG4 OS=Pinus taeda PE=2 SV=1	AT3G30340.1	| Symbols: | nodulin MtN21 /EamA-like transporter family protein | chr3:11956626-11958969 FORWARD LENGTH=364	LOC_Os04g38430.2	protein|nodulin, putative, expressed	IMGA|Medtr1g114210.1	Auxin-induced protein 5NG4 chr1 33072149-33074364 H EGN_Mt100125 20111014	NA	NA	GO:0016020|membrane
pt2_06858	A	A1S	Potri.002G182800	Potri.002G182800(AS)	POPTR_0002s18360	NA	NA	AT4G01575.1	| Symbols: | serine protease inhibitor, Kazal-type family protein | chr4:682040-682474 REVERSE LENGTH=144	LOC_Os01g59610.1	protein|KAZ1 - Kazal-type serine protease inhibitor precursor, expressed	IMGA|Medtr5g068760.1	hypothetical protein chr5 28139344-28140278 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0004867|serine-type endopeptidase inhibitor activity	GO:0009507|chloroplast
pt2_06859	A	A2S	Potri.002G182900	Potri.002G182900(AS) Potri.002G183100(BS)	POPTR_0002s18370	sp|Q8VZE4|PP299_ARATH	Pentatricopeptide repeat-containing protein At4g01570 OS=Arabidopsis thaliana GN=At4g01570 PE=2 SV=1	AT4G01570.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:679487-681904 FORWARD LENGTH=805	LOC_Os03g50500.1	protein|PPR repeat domain containing protein, putative, expressed	IMGA|Medtr5g095130.1	Pentatricopeptide repeat-containing protein chr5 40539476-40536629 H EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005739|mitochondrion
pt2_06860	A	A1S	Potri.002G183000	Potri.002G183000(AS)	POPTR_0002s18380	sp|Q9FMK9|PPA29_ARATH	Probable inactive purple acid phosphatase 29 OS=Arabidopsis thaliana GN=PAP29 PE=2 SV=1	AT5G63140.1	| Symbols: ATPAP29, PAP29 | purple acid phosphatase 29 | chr5:25328237-25329616 FORWARD LENGTH=389	LOC_Os09g36290.2	protein|Ser/Thr protein phosphatase family protein, putative, expressed	NA	NA	NA	GO:0003993|acid phosphatase activity GO:0004722|protein serine/threonine phosphatase activity GO:0016787|hydrolase activity	GO:0005576|extracellular region
pt2_06861	A	A2S	Potri.002G183000	Potri.002G183000(AS) Potri.002G183200(BS)	POPTR_0002s18380	sp|Q9FMK9|PPA29_ARATH	Probable inactive purple acid phosphatase 29 OS=Arabidopsis thaliana GN=PAP29 PE=2 SV=1	AT5G63140.1	| Symbols: ATPAP29, PAP29 | purple acid phosphatase 29 | chr5:25328237-25329616 FORWARD LENGTH=389	LOC_Os09g36290.2	protein|Ser/Thr protein phosphatase family protein, putative, expressed	NA	NA	NA	GO:0003993|acid phosphatase activity GO:0004722|protein serine/threonine phosphatase activity GO:0016787|hydrolase activity	GO:0005576|extracellular region
pt2_06862	A	A2S	Potri.002G183000	Potri.002G183000(AS) Potri.002G183200(DS)	POPTR_0002s18380	sp|Q9FMK9|PPA29_ARATH	Probable inactive purple acid phosphatase 29 OS=Arabidopsis thaliana GN=PAP29 PE=2 SV=1	AT5G63140.1	| Symbols: ATPAP29, PAP29 | purple acid phosphatase 29 | chr5:25328237-25329616 FORWARD LENGTH=389	LOC_Os09g36290.2	protein|Ser/Thr protein phosphatase family protein, putative, expressed	NA	NA	NA	GO:0003993|acid phosphatase activity GO:0004722|protein serine/threonine phosphatase activity GO:0016787|hydrolase activity	GO:0005576|extracellular region
pt2_06863	A	A1S	Potri.002G183200	Potri.002G183200(AS)	POPTR_0002s18400	sp|Q9FMK9|PPA29_ARATH	Probable inactive purple acid phosphatase 29 OS=Arabidopsis thaliana GN=PAP29 PE=2 SV=1	AT5G63140.1	| Symbols: ATPAP29, PAP29 | purple acid phosphatase 29 | chr5:25328237-25329616 FORWARD LENGTH=389	LOC_Os09g36290.2	protein|Ser/Thr protein phosphatase family protein, putative, expressed	NA	NA	NA	GO:0003993|acid phosphatase activity GO:0004722|protein serine/threonine phosphatase activity GO:0016787|hydrolase activity	GO:0005576|extracellular region
pt2_06864	A	A2S	Potri.002G183400	Potri.002G183400(AS) Potri.014G109400(DS)	POPTR_0002s18420	sp|O23680|TOC33_ARATH	Translocase of chloroplast 33, chloroplastic OS=Arabidopsis thaliana GN=TOC33 PE=1 SV=1	AT1G02280.2	| Symbols: TOC33, ATTOC33, PPI1 | translocon at the outer envelope membrane of chloroplasts 33 | chr1:448665-450246 REVERSE LENGTH=297	LOC_Os03g13730.1	protein|translocase of chloroplast 34, putative, expressed	NA	NA	GO:0006886|intracellular protein transport GO:0045036|protein targeting to chloroplast	GO:0003924|GTPase activity GO:0005515|protein binding GO:0005525|GTP binding GO:0015450|P-P-bond-hydrolysis-driven protein transmembrane transporter activity GO:0042802|identical protein binding GO:0042803|protein homodimerization activity	GO:0009507|chloroplast GO:0009707|chloroplast outer membrane GO:0009941|chloroplast envelope
pt2_06865	A	A1S	Potri.002G183500	Potri.002G183500(AS)	POPTR_0002s18430	sp|Q9BQ70|TCF25_HUMAN	Transcription factor 25 OS=Homo sapiens GN=TCF25 PE=1 SV=1	AT2G46900.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Basic helix-loop-helix, Nulp1-type (InterPro:IPR006994); Has 2929 Blast hits to 2464 proteins in 333 species: Archae - 2; Bacteria - 151; Metazoa - 913; Fungi - 372; Plants - 141; Viruses - 47; Other Eukaryotes - 1303 (source: NCBI BLink). | chr2:19269678-19271987 FORWARD LENGTH=627	LOC_Os09g33970.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005829|cytosol
pt2_06866	A	A1S	Potri.002G183600	Potri.002G183600(AS)	POPTR_0002s18450	sp|Q9XGP7|OMT15_ORYSJ	Tricin synthase 1 OS=Oryza sativa subsp. japonica GN=ROMT-15 PE=1 SV=1	AT3G62000.1	| Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr3:22959441-22961180 REVERSE LENGTH=278	LOC_Os08g05790.1	protein|caffeoyl-CoA O-methyltransferase, putative, expressed	NA	NA	NA	GO:0008171|O-methyltransferase activity	GO:0005829|cytosol
pt2_06867	A	A1S	Potri.002G183700	Potri.002G183700(AS)	POPTR_0002s18460	sp|Q8W4F1|PAP10_ARATH	Probable plastid-lipid-associated protein 10, chloroplastic OS=Arabidopsis thaliana GN=PAP10 PE=1 SV=1	AT2G46910.1	| Symbols: | Plastid-lipid associated protein PAP / fibrillin family protein | chr2:19272427-19273856 FORWARD LENGTH=284	NA	NA	IMGA|contig_166389_1.1	Homology to unknown gene contig_166389 843-1 E PREDN 20111014	GO:0008150|biological_process	GO:0005198|structural molecule activity	GO:0009507|chloroplast GO:0010287|plastoglobule
pt2_06868	A	A1S	Potri.002G183800	Potri.002G183800(AS)	POPTR_0002s18470	NA	NA	AT2G46915.1	| Symbols: | Protein of unknown function (DUF3754) | chr2:19274018-19277707 REVERSE LENGTH=708	LOC_Os06g01460.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_06869	A	A1S	Potri.002G183900	Potri.002G183900(AS)	POPTR_0002s18470	NA	NA	AT2G46915.1	| Symbols: | Protein of unknown function (DUF3754) | chr2:19274018-19277707 REVERSE LENGTH=708	LOC_Os06g01460.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_06870	A	A1S	Potri.002G183900	Potri.002G183900(AS)	POPTR_0002s18470	NA	NA	AT2G46915.1	| Symbols: | Protein of unknown function (DUF3754) | chr2:19274018-19277707 REVERSE LENGTH=708	LOC_Os06g01460.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_06871	A	A1S	Potri.002G184000	Potri.002G184000(AS)	POPTR_0002s18480	NA	NA	AT1G02290.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G45830.1); Has 134 Blast hits to 134 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 54; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr1:450646-451977 REVERSE LENGTH=443	LOC_Os08g39120.1	protein|expressed protein	IMGA|contig_51676_1.1	Unknown protein contig_51676 2357-9275 E PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06872	A	A1S	Potri.002G184100	Potri.002G184100(AS)	POPTR_0002s18490	sp|Q9SE96|GEML1_ARATH	GEM-like protein 1 OS=Arabidopsis thaliana GN=FIP1 PE=1 SV=1	AT1G28200.1	| Symbols: FIP1 | FH interacting protein 1 | chr1:9850395-9852300 REVERSE LENGTH=259	LOC_Os03g08860.1	protein|GRAM domain containing protein, expressed	IMGA|Medtr1g115130.1	GEM-like protein chr1 33325322-33326339 E EGN_Mt100125 20111014	GO:0006623|protein targeting to vacuole GO:0006944|cellular membrane fusion GO:0008150|biological_process GO:0016192|vesicle-mediated transport GO:0016197|endosomal transport	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_06873	A	A2S	Potri.002G184200	Potri.002G184200(AS) Potri.014G109800(DS)	POPTR_0002s18500	sp|Q5R6D1|CATB_PONAB	Cathepsin B OS=Pongo abelii GN=CTSB PE=2 SV=1	AT1G02305.1	| Symbols: | Cysteine proteinases superfamily protein | chr1:455816-457974 FORWARD LENGTH=362	LOC_Os05g24550.5	protein|Papain family cysteine protease domain containing protein, expressed	IMGA|Medtr5g022560.1	Cysteine proteinase chr5 8641248-8642649 F EGN_Mt100125 20111014	GO:0000902|cell morphogenesis GO:0006508|proteolysis GO:0006635|fatty acid beta-oxidation GO:0010162|seed dormancy process GO:0016049|cell growth GO:0048193|Golgi vesicle transport GO:0050790|regulation of catalytic activity	GO:0004197|cysteine-type endopeptidase activity GO:0008234|cysteine-type peptidase activity	GO:0005576|extracellular region GO:0005773|vacuole GO:0005829|cytosol
pt2_06874	B	B1S	Potri.002G184300	Potri.002G184300(BS)	POPTR_0002s18510	sp|Q4R5M2|CATB_MACFA	Cathepsin B OS=Macaca fascicularis GN=CTSB PE=2 SV=1	AT1G02305.1	| Symbols: | Cysteine proteinases superfamily protein | chr1:455816-457974 FORWARD LENGTH=362	LOC_Os05g24550.5	protein|Papain family cysteine protease domain containing protein, expressed	IMGA|Medtr5g022560.1	Cysteine proteinase chr5 8641248-8642649 F EGN_Mt100125 20111014	GO:0006508|proteolysis GO:0050790|regulation of catalytic activity	GO:0004197|cysteine-type endopeptidase activity GO:0008234|cysteine-type peptidase activity	GO:0005576|extracellular region GO:0005773|vacuole
pt2_06875	A	A2S	Potri.002G184400	Potri.002G184400(AS) Potri.014G109900(DS)	POPTR_0002s18520	sp|Q9ULE6|PALD_HUMAN	Paladin OS=Homo sapiens GN=PALD PE=1 SV=3	AT3G62010.1	| Symbols: | unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 553 Blast hits to 216 proteins in 93 species: Archae - 0; Bacteria - 124; Metazoa - 193; Fungi - 58; Plants - 108; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). | chr3:22964945-22971149 FORWARD LENGTH=1254	LOC_Os03g38970.1	protein|metal ion binding protein, putative, expressed	NA	NA	NA	NA	GO:0005634|nucleus GO:0005829|cytosol
pt2_06876	A	A1S	Potri.002G184400	Potri.002G184400(AS)	POPTR_0002s18520	sp|Q9ULE6|PALD_HUMAN	Paladin OS=Homo sapiens GN=PALD PE=1 SV=3	AT3G62010.1	| Symbols: | unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 553 Blast hits to 216 proteins in 93 species: Archae - 0; Bacteria - 124; Metazoa - 193; Fungi - 58; Plants - 108; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). | chr3:22964945-22971149 FORWARD LENGTH=1254	LOC_Os03g38970.1	protein|metal ion binding protein, putative, expressed	NA	NA	NA	NA	GO:0005634|nucleus GO:0005829|cytosol
pt2_06877	A	A2S	Potri.002G184400	Potri.002G184400(AS) Potri.014G109900(DS)	POPTR_0002s18520	sp|Q9ULE6|PALD_HUMAN	Paladin OS=Homo sapiens GN=PALD PE=1 SV=3	AT3G62010.1	| Symbols: | unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 553 Blast hits to 216 proteins in 93 species: Archae - 0; Bacteria - 124; Metazoa - 193; Fungi - 58; Plants - 108; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). | chr3:22964945-22971149 FORWARD LENGTH=1254	LOC_Os03g38970.1	protein|metal ion binding protein, putative, expressed	NA	NA	NA	NA	GO:0005634|nucleus GO:0005829|cytosol
pt2_06878	A	A1S	Potri.002G184500	Potri.002G184500(AS)	POPTR_0002s18530	sp|Q8L5J1|MAN4_SOLLC	Mannan endo-1,4-beta-mannosidase 4 OS=Solanum lycopersicum GN=MAN4 PE=1 SV=2	AT5G66460.1	| Symbols: MAN7, AtMAN7 | Glycosyl hydrolase superfamily protein | chr5:26538911-26540837 REVERSE LENGTH=431	LOC_Os01g47400.1	protein|OsMan01 - Endo-Beta-Mannanase, expressed	IMGA|Medtr1g085350.1	"Mannan endo-1,4-beta-mannosidase" chr1 22572214-22566777 E EGN_Mt100125 20111014	GO:0008152|metabolic process GO:0009845|seed germination GO:0009855|determination of bilateral symmetry GO:0009944|polarity specification of adaxial/abaxial axis GO:0010014|meristem initiation GO:0010075|regulation of meristem growth	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0043169|cation binding	GO:0005576|extracellular region
pt2_06879	A	A1S	Potri.002G184600	Potri.002G184600(AS)	POPTR_0002s18540	NA	NA	AT5G03050.1	| Symbols: | unknown protein; Has 33 Blast hits to 33 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:715302-715983 REVERSE LENGTH=140	NA	NA	IMGA|Medtr1g085360.1	Expansin-A31 chr1 22575085-22577047 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06880	A	A1S	Potri.002G184700	Potri.002G184700(AS)	POPTR_0002s18550	sp|Q9ZSI1|EXP17_ARATH	Putative expansin-A17 OS=Arabidopsis thaliana GN=EXPA17 PE=2 SV=1	AT4G01630.1	| Symbols: ATEXPA17, ATEXP17, ATHEXP ALPHA 1.13, EXPA17 | expansin A17 | chr4:700653-701527 FORWARD LENGTH=255	LOC_Os06g50400.1	protein|expansin precursor, putative, expressed	IMGA|Medtr5g075320.1	Expansin chr5 31001917-31000125 H EGN_Mt100125 20111014	GO:0009664|plant-type cell wall organization GO:0009826|unidimensional cell growth GO:0009828|plant-type cell wall loosening GO:0009831|plant-type cell wall modification involved in multidimensional cell growth	NA	GO:0005576|extracellular region
pt2_06881	A	A1S	Potri.002G184800	Potri.002G184800(AS)	POPTR_0002s18560	sp|Q9ZSI1|EXP17_ARATH	Putative expansin-A17 OS=Arabidopsis thaliana GN=EXPA17 PE=2 SV=1	AT4G01630.1	| Symbols: ATEXPA17, ATEXP17, ATHEXP ALPHA 1.13, EXPA17 | expansin A17 | chr4:700653-701527 FORWARD LENGTH=255	LOC_Os02g16809.1	protein|expansin precursor, putative, expressed	IMGA|Medtr5g079950.1	Expansin chr5 33196713-33195638 E EGN_Mt100125 20111014	GO:0009664|plant-type cell wall organization GO:0009826|unidimensional cell growth GO:0009828|plant-type cell wall loosening GO:0009831|plant-type cell wall modification involved in multidimensional cell growth	NA	GO:0005576|extracellular region
pt2_06882	A	A1S	Potri.002G184900	Potri.002G184900(AS)	POPTR_0002s18570	sp|Q9M263|GL24_ARATH	Germin-like protein subfamily 2 member 4 OS=Arabidopsis thaliana GN=GLP10 PE=2 SV=1	AT3G62020.1	| Symbols: GLP10 | germin-like protein 10 | chr3:22971443-22972192 REVERSE LENGTH=220	LOC_Os05g19670.1	protein|Cupin domain containing protein, expressed	IMGA|Medtr1g085140.1	Germin-like protein chr1 22470865-22472569 F EGN_Mt100125 20111014	GO:0008150|biological_process GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process	GO:0030145|manganese ion binding GO:0045735|nutrient reservoir activity	GO:0005576|extracellular region GO:0005618|cell wall GO:0009505|plant-type cell wall GO:0048046|apoplast
pt2_06883	A	A1S	Potri.002G185000	Potri.002G185000(AS)	POPTR_0002s18590	sp|Q8RWN7|P2C32_ARATH	Protein phosphatase 2C 32 OS=Arabidopsis thaliana GN=POL PE=1 SV=2	AT2G46920.2	| Symbols: POL | Protein phosphatase 2C family protein | chr2:19278106-19280921 REVERSE LENGTH=856	LOC_Os03g25600.2	protein|protein phosphatase 2C, putative, expressed	IMGA|contig_113959_1.1	Protein phosphatase 2C contig_113959 455-2236 E PREDN 20111014	GO:0000226|microtubule cytoskeleton organization GO:0006355|regulation of transcription, DNA-dependent GO:0006406|mRNA export from nucleus GO:0006499|N-terminal protein myristoylation GO:0007155|cell adhesion GO:0009909|regulation of flower development GO:0009934|regulation of meristem structural organization GO:0010074|maintenance of meristem identity GO:0010090|trichome morphogenesis GO:0018345|protein palmitoylation GO:0018377|protein myristoylation GO:0043687|post-translational protein modification GO:0045010|actin nucleation GO:0045893|positive regulation of transcription, DNA-dependent GO:0048765|root hair cell differentiation GO:0071555|cell wall organization	GO:0003824|catalytic activity GO:0004722|protein serine/threonine phosphatase activity GO:0005543|phospholipid binding	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_06884	A	A2S	Potri.002G185000	Potri.002G185000(AS) Potri.014G110500(BS)	POPTR_0002s18590	sp|Q8RWN7|P2C32_ARATH	Protein phosphatase 2C 32 OS=Arabidopsis thaliana GN=POL PE=1 SV=2	AT2G46920.2	| Symbols: POL | Protein phosphatase 2C family protein | chr2:19278106-19280921 REVERSE LENGTH=856	LOC_Os03g25600.2	protein|protein phosphatase 2C, putative, expressed	IMGA|contig_113959_1.1	Protein phosphatase 2C contig_113959 455-2236 E PREDN 20111014	GO:0000226|microtubule cytoskeleton organization GO:0006355|regulation of transcription, DNA-dependent GO:0006406|mRNA export from nucleus GO:0006499|N-terminal protein myristoylation GO:0007155|cell adhesion GO:0009909|regulation of flower development GO:0009934|regulation of meristem structural organization GO:0010074|maintenance of meristem identity GO:0010090|trichome morphogenesis GO:0018345|protein palmitoylation GO:0018377|protein myristoylation GO:0043687|post-translational protein modification GO:0045010|actin nucleation GO:0045893|positive regulation of transcription, DNA-dependent GO:0048765|root hair cell differentiation GO:0071555|cell wall organization	GO:0003824|catalytic activity GO:0004722|protein serine/threonine phosphatase activity GO:0005543|phospholipid binding	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_06885	C	C1S	Potri.002G185100	Potri.002G185100(CS)	NA	NA	AT4G01650.2	| Symbols: | Polyketide cyclase / dehydrase and lipid transport protein | chr4:704578-706931 REVERSE LENGTH=211	LOC_Os01g74010.2	protein|cyclase/dehydrase family protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0009507|chloroplast
pt2_06886	A	A2S	Potri.002G185200	Potri.002G185200(AS) Potri.002G185300(AA)	POPTR_0002s18610	sp|P34791|CP20C_ARATH	Peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic OS=Arabidopsis thaliana GN=CYP20-3 PE=1 SV=1	AT3G62030.3	| Symbols: ROC4 | rotamase CYP 4 | chr3:22973708-22975139 FORWARD LENGTH=259	LOC_Os01g18210.1	protein|peptidyl-prolyl cis-trans isomerase, putative, expressed	IMGA|AC225458_18.1	Peptidyl-prolyl cis-trans isomerase AC225458.11 44405-42269 E EGN_Mt100125 20111014	GO:0000096|sulfur amino acid metabolic process GO:0000413|protein peptidyl-prolyl isomerization GO:0006457|protein folding GO:0006546|glycine catabolic process GO:0006636|unsaturated fatty acid biosynthetic process GO:0006733|oxidoreduction coenzyme metabolic process GO:0006766|vitamin metabolic process GO:0006979|response to oxidative stress GO:0007165|signal transduction GO:0008652|cellular amino acid biosynthetic process GO:0009072|aromatic amino acid family metabolic process GO:0009073|aromatic amino acid family biosynthetic process GO:0009106|lipoate metabolic process GO:0009108|coenzyme biosynthetic process GO:0009117|nucleotide metabolic process GO:0009409|response to cold GO:0009637|response to blue light GO:0009642|response to light intensity GO:0009644|response to high light intensity GO:0009651|response to salt stress GO:0009695|jasmonic acid biosynthetic process GO:0009697|salicylic acid biosynthetic process GO:0009737|response to abscisic acid stimulus GO:0009744|response to sucrose stimulus GO:0009814|defense response, incompatible interaction GO:0009965|leaf morphogenesis GO:0010114|response to red light GO:0010155|regulation of proton transport GO:0010218|response to far red light GO:0010555|response to mannitol stimulus GO:0015995|chlorophyll biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019344|cysteine biosynthetic process GO:0019684|photosynthesis, light reaction GO:0019748|secondary metabolic process GO:0030154|cell differentiation GO:0042742|defense response to bacterium GO:0044272|sulfur compound biosynthetic process GO:0045036|protein targeting to chloroplast GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003755|peptidyl-prolyl cis-trans isomerase activity GO:0005515|protein binding	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009570|chloroplast stroma GO:0009579|thylakoid GO:0009941|chloroplast envelope GO:0022626|cytosolic ribosome GO:0031977|thylakoid lumen GO:0048046|apoplast
pt2_06887	A	A2S	Potri.002G185300	Potri.002G185300(AS) Potri.002G185200(AA)	POPTR_0002s18620	sp|Q09893|YAI5_SCHPO	Uncharacterized protein C24B11.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC24B11.05 PE=2 SV=1	AT3G62040.1	| Symbols: | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr3:22975328-22976518 REVERSE LENGTH=249	LOC_Os03g61829.1	protein|haloacid dehalogenase-like hydrolase family protein, putative, expressed	NA	NA	GO:0015824|proline transport	GO:0016787|hydrolase activity	GO:0005634|nucleus
pt2_06888	A	A1S	Potri.002G185400	Potri.002G185400(AS)	POPTR_0002s18630	sp|Q6AY19|ADCK4_RAT	Uncharacterized aarF domain-containing protein kinase 4 OS=Rattus norvegicus GN=Adck4 PE=2 SV=1	AT4G01660.1	| Symbols: ATABC1, ATATH10, ABC1 | ABC transporter 1 | chr4:708652-711095 FORWARD LENGTH=623	LOC_Os01g21610.1	protein|uncharacterized aarF domain-containing protein kinase 4, putative, expressed	IMGA|Medtr5g077080.1	"aarF domain-containing protein kinase, putative" chr5 31882578-31890966 H EGN_Mt100125 20111014	GO:0015996|chlorophyll catabolic process GO:0017004|cytochrome complex assembly	GO:0005215|transporter activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005739|mitochondrion GO:0005746|mitochondrial respiratory chain
pt2_06889	C	C1S	Potri.002G185400	Potri.002G185400(CS)	sp|Q6AY19|ADCK4_RAT	Uncharacterized aarF domain-containing protein kinase 4 OS=Rattus norvegicus GN=Adck4 PE=2 SV=1	AT4G01660.1	| Symbols: ATABC1, ATATH10, ABC1 | ABC transporter 1 | chr4:708652-711095 FORWARD LENGTH=623	LOC_Os01g21610.1	protein|uncharacterized aarF domain-containing protein kinase 4, putative, expressed	IMGA|Medtr5g077080.1	"aarF domain-containing protein kinase, putative" chr5 31882578-31890966 H EGN_Mt100125 20111014	GO:0015996|chlorophyll catabolic process GO:0017004|cytochrome complex assembly	GO:0005215|transporter activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005739|mitochondrion GO:0005746|mitochondrial respiratory chain
pt2_06890	A	A1S	Potri.002G185400	Potri.002G185400(AS)	POPTR_0002s18650	sp|Q6AY19|ADCK4_RAT	Uncharacterized aarF domain-containing protein kinase 4 OS=Rattus norvegicus GN=Adck4 PE=2 SV=1	AT4G01660.1	| Symbols: ATABC1, ATATH10, ABC1 | ABC transporter 1 | chr4:708652-711095 FORWARD LENGTH=623	LOC_Os01g21610.1	protein|uncharacterized aarF domain-containing protein kinase 4, putative, expressed	IMGA|Medtr5g077080.1	"aarF domain-containing protein kinase, putative" chr5 31882578-31890966 H EGN_Mt100125 20111014	GO:0015996|chlorophyll catabolic process GO:0017004|cytochrome complex assembly	GO:0005215|transporter activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005739|mitochondrion GO:0005746|mitochondrial respiratory chain
pt2_06891	A	A1S	Potri.002G185500	Potri.002G185500(AS)	POPTR_0002s18660	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006139|nucleobase-containing compound metabolic process	GO:0003676|nucleic acid binding GO:0008408|3'-5' exonuclease activity	GO:0005622|intracellular GO:0005634|nucleus
pt2_06892	G	G1	NA	NA	POPTR_0002s18670	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06893	A	A1S	Potri.002G185700	Potri.002G185700(AS)	POPTR_0002s18680	NA	NA	AT2G46940.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G62070.1); Has 143 Blast hits to 141 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 139; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:19286658-19287505 REVERSE LENGTH=252	LOC_Os01g18220.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06894	A	A1S	Potri.002G185800	Potri.002G185800(AS)	POPTR_0002s18690	sp|Q8K2Y7|RM47_MOUSE	39S ribosomal protein L47, mitochondrial OS=Mus musculus GN=Mrpl47 PE=2 SV=2	AT1G07830.1	| Symbols: | ribosomal protein L29 family protein | chr1:2422549-2423392 FORWARD LENGTH=144	LOC_Os06g03790.1	protein|39S ribosomal protein L47, mitochondrial precursor, putative, expressed	IMGA|Medtr5g015850.1	NAD(P)H-quinone oxidoreductase subunit I chr5 5315738-5311288 E EGN_Mt100125 20111014	GO:0006354|DNA-dependent transcription, elongation GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005739|mitochondrion GO:0005761|mitochondrial ribosome GO:0005840|ribosome
pt2_06895	A	A1S	Potri.002G185900	Potri.002G185900(AS)	POPTR_0002s18700	sp|Q8LPH6|MYB86_ARATH	Transcription factor MYB86 OS=Arabidopsis thaliana GN=MYB86 PE=2 SV=1	AT1G09540.1	| Symbols: MYB61, ATMYB61 | myb domain protein 61 | chr1:3086333-3087689 FORWARD LENGTH=366	LOC_Os05g04820.1	protein|MYB family transcription factor, putative, expressed	IMGA|contig_50759_2.1	Myb-like transcription factor contig_50759 4684-3490 E PREDN 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_06896	A	A1S	Potri.002G186000	Potri.002G186000(AS)	POPTR_0002s18710	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06897	A	A1S	Potri.002G186100	Potri.002G186100(AS)	POPTR_0002s18720	sp|Q5FW14|CHMP7_XENTR	Charged multivesicular body protein 7 OS=Xenopus tropicalis GN=chmp7 PE=2 SV=1	AT3G62080.1	| Symbols: | SNF7 family protein | chr3:22986383-22988517 FORWARD LENGTH=423	LOC_Os01g18280.1	protein|SNF7 domain containing protein, putative, expressed	NA	NA	GO:0007346|regulation of mitotic cell cycle GO:0015031|protein transport	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_06898	A	A2S	Potri.002G186200	Potri.002G186200(AS) Potri.014G111500(DS)	POPTR_0002s18730	NA	NA	AT2G46980.2	| Symbols: | unknown protein; Has 3995 Blast hits to 3325 proteins in 374 species: Archae - 19; Bacteria - 205; Metazoa - 2201; Fungi - 364; Plants - 149; Viruses - 22; Other Eukaryotes - 1035 (source: NCBI BLink). | chr2:19299868-19303429 REVERSE LENGTH=793	LOC_Os10g26560.1	protein|expressed protein	NA	NA	GO:0007126|meiosis	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005694|chromosome GO:0005730|nucleolus
pt2_06899	A	A2S	Potri.002G186300	Potri.002G186300(AS) Potri.014G111600(DS)	POPTR_0002s18740	sp|P55826|PPOC_ARATH	Protoporphyrinogen oxidase, chloroplastic OS=Arabidopsis thaliana GN=PPOX PE=2 SV=1	AT4G01690.1	| Symbols: PPOX, HEMG1, PPO1 | Flavin containing amine oxidoreductase family | chr4:729929-732309 FORWARD LENGTH=537	LOC_Os01g18320.1	protein|protoporphyrinogen oxidase, chloroplast precursor, putative, expressed	NA	NA	GO:0006779|porphyrin-containing compound biosynthetic process GO:0055114|oxidation-reduction process	GO:0004729|oxygen-dependent protoporphyrinogen oxidase activity GO:0016491|oxidoreductase activity	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009941|chloroplast envelope
pt2_06900	A	A1S	Potri.002G186400	Potri.002G186400(AS)	POPTR_0002s18750	sp|Q9M1R4|IAA30_ARATH	Auxin-responsive protein IAA30 OS=Arabidopsis thaliana GN=IAA30 PE=2 SV=1	AT3G62100.1	| Symbols: IAA30 | indole-3-acetic acid inducible 30 | chr3:22995835-22996593 FORWARD LENGTH=172	LOC_Os02g49160.1	protein|OsIAA8 - Auxin-responsive Aux/IAA gene family member, expressed	IMGA|Medtr1g070830.1	Auxin-induced protein chr1 17318116-17319328 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009630|gravitropism GO:0009733|response to auxin stimulus GO:0010262|somatic embryogenesis GO:0010583|response to cyclopentenone GO:0048364|root development	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_06901	A	A1S	Potri.002G186500	Potri.002G186500(AS)	POPTR_0002s18760	sp|Q5NB11|CHI10_ORYSJ	Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1	AT4G01700.1	| Symbols: | Chitinase family protein | chr4:732413-733487 REVERSE LENGTH=280	LOC_Os01g18400.1	protein|CHIT10 - Chitinase family protein precursor, expressed	NA	NA	GO:0005975|carbohydrate metabolic process GO:0006865|amino acid transport GO:0010167|response to nitrate GO:0015706|nitrate transport GO:0016998|cell wall macromolecule catabolic process GO:0050832|defense response to fungus	GO:0004568|chitinase activity	GO:0005576|extracellular region GO:0005618|cell wall
pt2_06902	A	A1S	Potri.002G186600	Potri.002G186600(AS)	POPTR_0002s18770	sp|Q9ZSI7|WRK47_ARATH	Probable WRKY transcription factor 47 OS=Arabidopsis thaliana GN=WRKY47 PE=2 SV=2	AT4G01720.1	| Symbols: WRKY47, AtWRKY47 | WRKY family transcription factor | chr4:744949-748219 FORWARD LENGTH=489	LOC_Os01g18584.1	protein|WRKY9, expressed	IMGA|Medtr5g044700.1	WRKY transcription factor chr5 19196079-19199060 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006857|oligopeptide transport GO:0010167|response to nitrate GO:0015706|nitrate transport GO:0045892|negative regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_06903	C	C1S	Potri.002G186700	Potri.002G186700(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06904	A	A1S	Potri.002G186800	Potri.002G186800(AS)	POPTR_0002s18790	sp|Q9M115|ZDH16_ARATH	Probable S-acyltransferase At4g01730 OS=Arabidopsis thaliana GN=At4g01730 PE=2 SV=2	AT4G01730.1	| Symbols: | DHHC-type zinc finger family protein | chr4:749574-752034 FORWARD LENGTH=508	LOC_Os12g16210.1	protein|zinc finger family protein, putative, expressed	IMGA|Medtr5g042870.1	Palmitoyltransferase chr5 18425623-18419734 F EGN_Mt100125 20111014	GO:0000226|microtubule cytoskeleton organization GO:0006346|methylation-dependent chromatin silencing GO:0008150|biological_process GO:0031048|chromatin silencing by small RNA GO:0048451|petal formation GO:0048453|sepal formation GO:0051567|histone H3-K9 methylation	GO:0008270|zinc ion binding	NA
pt2_06905	A	A2S	Potri.002G186900	Potri.002G186900(AS) Potri.014G112100(DS)	POPTR_0002s18800	sp|A7PZL3|PGLR_VITVI	Probable polygalacturonase OS=Vitis vinifera GN=GSVIVT00026920001 PE=1 SV=1	AT3G62110.1	| Symbols: | Pectin lyase-like superfamily protein | chr3:22997313-22999503 REVERSE LENGTH=471	LOC_Os03g61800.1	protein|polygalacturonase, putative, expressed	IMGA|Medtr1g100060.1	hypothetical protein chr1 29104014-29100579 H EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0010583|response to cyclopentenone	GO:0004650|polygalacturonase activity	GO:0005576|extracellular region GO:0005773|vacuole
pt2_06906	A	A1S	Potri.002G187000	Potri.002G187000(AS)	POPTR_0002s18810	sp|O60155|YHY6_SCHPO	Putative proline--tRNA ligase C19C7.06 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC19C7.06 PE=2 SV=1	AT3G62120.2	| Symbols: | Class II aaRS and biotin synthetases superfamily protein | chr3:23001227-23003849 REVERSE LENGTH=530	LOC_Os12g25710.3	protein|bifunctional aminoacyl-tRNA synthetase, putative, expressed	NA	NA	GO:0006418|tRNA aminoacylation for protein translation GO:0006433|prolyl-tRNA aminoacylation	GO:0000166|nucleotide binding GO:0004812|aminoacyl-tRNA ligase activity GO:0004827|proline-tRNA ligase activity GO:0005524|ATP binding	GO:0005737|cytoplasm GO:0005829|cytosol GO:0009506|plasmodesma GO:0016020|membrane
pt2_06907	A	A1S	Potri.002G187100	Potri.002G187100(AS)	POPTR_0002s18820	sp|Q6BQT6|SEC23_DEBHA	Protein transport protein SEC23 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=SEC23 PE=3 SV=1	AT4G01810.1	| Symbols: | Sec23/Sec24 protein transport family protein | chr4:776734-779802 REVERSE LENGTH=880	LOC_Os01g21850.1	protein|protein transport protein-related, putative, expressed	NA	NA	GO:0006886|intracellular protein transport GO:0006888|ER to Golgi vesicle-mediated transport	GO:0008270|zinc ion binding	GO:0005829|cytosol GO:0030127|COPII vesicle coat
pt2_06908	A	A1S	Potri.002G187200	Potri.002G187200(AS)	POPTR_0002s18830	sp|P18549|CEFD_STRCL	Isopenicillin N epimerase OS=Streptomyces clavuligerus GN=cefD PE=1 SV=3	AT3G62130.1	| Symbols: | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein | chr3:23004994-23006358 FORWARD LENGTH=454	LOC_Os01g18640.2	protein|aminotransferase, putative, expressed	NA	NA	GO:0019450|L-cysteine catabolic process to pyruvate	GO:0080146|L-Cysteine desulfhydrase activity	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_06909	A	A1S	Potri.002G187300	Potri.002G187300(AS)	POPTR_0002s18840	NA	NA	AT1G48300.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 96 Blast hits to 87 proteins in 37 species: Archae - 0; Bacteria - 2; Metazoa - 12; Fungi - 2; Plants - 65; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). | chr1:17847391-17848338 FORWARD LENGTH=285	LOC_Os05g04620.1	protein|expressed protein	NA	NA	GO:0008152|metabolic process GO:0019432|triglyceride biosynthetic process	GO:0004144|diacylglycerol O-acyltransferase activity	GO:0005829|cytosol
pt2_06910	A	A1S	Potri.002G187400	Potri.002G187400(AS)	POPTR_0002s18850	sp|Q9M1Q9|AB21B_ARATH	ABC transporter B family member 21 OS=Arabidopsis thaliana GN=ABCB21 PE=1 SV=2	AT3G62150.1	| Symbols: PGP21 | P-glycoprotein 21 | chr3:23008755-23013579 REVERSE LENGTH=1296	LOC_Os01g18670.1	protein|MDR-like ABC transporter, putative, expressed	IMGA|Medtr1g086080.1	ABC transporter B family member chr1 22880421-22874428 E EGN_Mt100125 20111014	GO:0006810|transport GO:0055085|transmembrane transport	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0005634|nucleus GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016021|integral to membrane
pt2_06911	A	A1S	Potri.002G187500	Potri.002G187500(AS)	POPTR_0002s18860	sp|Q9M1Q9|AB21B_ARATH	ABC transporter B family member 21 OS=Arabidopsis thaliana GN=ABCB21 PE=1 SV=2	AT3G62150.1	| Symbols: PGP21 | P-glycoprotein 21 | chr3:23008755-23013579 REVERSE LENGTH=1296	LOC_Os01g18670.1	protein|MDR-like ABC transporter, putative, expressed	IMGA|Medtr1g086080.1	ABC transporter B family member chr1 22880421-22874428 E EGN_Mt100125 20111014	GO:0000303|response to superoxide GO:0006810|transport GO:0006888|ER to Golgi vesicle-mediated transport GO:0007165|signal transduction GO:0009407|toxin catabolic process GO:0009414|response to water deprivation GO:0009630|gravitropism GO:0009651|response to salt stress GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009735|response to cytokinin stimulus GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009743|response to carbohydrate stimulus GO:0009753|response to jasmonic acid stimulus GO:0009873|ethylene mediated signaling pathway GO:0009926|auxin polar transport GO:0010315|auxin efflux GO:0010540|basipetal auxin transport GO:0010583|response to cyclopentenone GO:0042538|hyperosmotic salinity response GO:0043090|amino acid import GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0043248|proteasome assembly GO:0048767|root hair elongation GO:0051788|response to misfolded protein GO:0055085|transmembrane transport	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0008559|xenobiotic-transporting ATPase activity GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0005634|nucleus GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane
pt2_06912	A	A1S	Potri.002G187600	Potri.002G187600(AS)	POPTR_0002s18870	sp|Q9S6Z8|TPK5_ARATH	Two-pore potassium channel 5 OS=Arabidopsis thaliana GN=TPK5 PE=1 SV=1	AT4G01840.1	| Symbols: KCO5, ATTPK5, ATKCO5, TPK5 | Ca2+ activated outward rectifying K+ channel 5 | chr4:793403-794933 FORWARD LENGTH=408	LOC_Os09g12790.1	protein|potassium channel protein, putative, expressed	IMGA|Medtr5g095650.1	Outward rectifying potassium channel chr5 40770179-40772279 E EGN_Mt100125 20111014	GO:0071805|potassium ion transmembrane transport	GO:0005267|potassium channel activity GO:0015271|outward rectifier potassium channel activity	GO:0009507|chloroplast GO:0009705|plant-type vacuole membrane GO:0016020|membrane
pt2_06913	A	A1S	Potri.002G187700	Potri.002G187700(AS)	POPTR_0002s18880	NA	NA	AT2G47010.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G17030.1); Has 72 Blast hits to 72 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | chr2:19317505-19319252 FORWARD LENGTH=493	LOC_Os05g19000.1	protein|expressed protein	IMGA|Medtr1g086170.1	hypothetical protein chr1 22925539-22927989 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_06914	A	A1S	Potri.002G187700	Potri.002G187700(AS)	POPTR_0002s18880	NA	NA	AT2G47010.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G17030.1); Has 72 Blast hits to 72 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | chr2:19317505-19319252 FORWARD LENGTH=493	LOC_Os05g19000.1	protein|expressed protein	IMGA|Medtr1g086170.1	hypothetical protein chr1 22925539-22927989 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_06915	A	A1S	Potri.002G187800	Potri.002G187800(AS)	POPTR_0002s18890	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06916	A	A1S	Potri.002G187900	Potri.002G187900(AS)	POPTR_0002s18900	NA	NA	AT1G64260.1	| Symbols: | MuDR family transposase | chr1:23847756-23849915 FORWARD LENGTH=719	LOC_Os06g42640.1	protein|transposon protein, putative, unclassified, expressed	IMGA|Medtr5g081480.1	hypothetical protein chr5 33887201-33883897 I EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0008270|zinc ion binding	GO:0005575|cellular_component
pt2_06917	A	A1S	Potri.002G188000	Potri.002G188000(AS)	POPTR_0002s18910	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06918	A	A2S	Potri.002G188100	Potri.002G188100(AS) Potri.014G113900(DS)	POPTR_0002s18920	NA	NA	AT1G75250.2	| Symbols: ATRL6, RSM3, RL6 | RAD-like 6 | chr1:28244463-28245453 REVERSE LENGTH=97	LOC_Os05g50340.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr5g020540.1	MYB transcription factor MYB164 chr5 7602017-7599067 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus GO:0009507|chloroplast
pt2_06919	A	A1S	Potri.002G188200	Potri.002G188200(AS)	POPTR_0002s18930	sp|Q2RWE1|RF1_RHORT	Peptide chain release factor 1 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=prfA PE=3 SV=1	AT2G47020.1	| Symbols: | Peptide chain release factor 1 | chr2:19320090-19322279 REVERSE LENGTH=413	LOC_Os05g19630.2	protein|peptide chain release factor protein, putative, expressed	NA	NA	GO:0006415|translational termination	GO:0003747|translation release factor activity GO:0016149|translation release factor activity, codon specific	GO:0005737|cytoplasm GO:0009507|chloroplast
pt2_06920	C	C1S	Potri.002G188300	Potri.002G188300(CS)	NA	NA	AT3G62190.1	| Symbols: | Chaperone DnaJ-domain superfamily protein | chr3:23021146-23022614 FORWARD LENGTH=138	LOC_Os07g44310.1	protein|heat shock protein DnaJ, putative, expressed	NA	NA	GO:0006457|protein folding GO:0048573|photoperiodism, flowering	GO:0031072|heat shock protein binding	GO:0005737|cytoplasm
pt2_06921	A	A1S	Potri.002G188400	Potri.002G188400(AS)	POPTR_0002s18950	NA	NA	AT3G17450.1	| Symbols: | hAT dimerisation domain-containing protein | chr3:5972793-5975684 REVERSE LENGTH=877	LOC_Os09g32380.1	protein|transposon protein, putative, unclassified, expressed	IMGA|Medtr5g012510.1	hypothetical protein chr5 3512350-3509693 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003677|DNA binding GO:0046983|protein dimerization activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06922	A	A2S	Potri.002G188400	Potri.002G188400(AS) Potri.014G114100(DS)	POPTR_0002s18950	NA	NA	AT3G17450.1	| Symbols: | hAT dimerisation domain-containing protein | chr3:5972793-5975684 REVERSE LENGTH=877	LOC_Os09g32380.1	protein|transposon protein, putative, unclassified, expressed	IMGA|Medtr5g012510.1	hypothetical protein chr5 3512350-3509693 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003677|DNA binding GO:0046983|protein dimerization activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06923	C	C2S	Potri.002G188300	Potri.002G188300(CS) Potri.002G188400(CS)	NA	NA	AT3G62190.1	| Symbols: | Chaperone DnaJ-domain superfamily protein | chr3:23021146-23022614 FORWARD LENGTH=138	LOC_Os07g44310.1	protein|heat shock protein DnaJ, putative, expressed	NA	NA	GO:0006457|protein folding GO:0048573|photoperiodism, flowering	GO:0031072|heat shock protein binding	GO:0005737|cytoplasm
pt2_06924	A	A1S	Potri.002G188600	Potri.002G188600(AS)	POPTR_0002s18960	sp|O80719|Y2706_ARATH	Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1	AT3G62220.1	| Symbols: | Protein kinase superfamily protein | chr3:23029276-23030864 REVERSE LENGTH=361	LOC_Os05g04520.1	protein|protein kinase, putative, expressed	IMGA|Medtr1g086230.2	Pto kinase interactor chr1 22948404-22943925 F EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006979|response to oxidative stress	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005575|cellular_component GO:0005634|nucleus GO:0005737|cytoplasm GO:0005886|plasma membrane
pt2_06925	A	A1S	Potri.002G188700	Potri.002G188700(AS)	POPTR_0002s18970	sp|Q9SMX9|SPL1_ARATH	Squamosa promoter-binding-like protein 1 OS=Arabidopsis thaliana GN=SPL1 PE=1 SV=2	AT2G47070.1	| Symbols: SPL1 | squamosa promoter binding protein-like 1 | chr2:19337144-19340552 FORWARD LENGTH=881	LOC_Os03g61760.1	protein|OsSPL6 - SBP-box gene family member, expressed	IMGA|Medtr1g035010.1	Squamosa promoter binding-like protein chr1 9713109-9707112 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0010413|glucuronoxylan metabolic process GO:0032880|regulation of protein localization GO:0042744|hydrogen peroxide catabolic process GO:0045492|xylan biosynthetic process	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_06926	C	C1S	Potri.002G188800	Potri.002G188800(CS)	sp|Q3EBM5|ASPR1_ARATH	Probable aspartic protease At2g35615 OS=Arabidopsis thaliana GN=At2g35615 PE=3 SV=1	AT1G64830.1	| Symbols: | Eukaryotic aspartyl protease family protein | chr1:24091271-24092566 REVERSE LENGTH=431	LOC_Os04g37550.1	protein|aspartic proteinase nepenthesin-2 precursor, putative, expressed	IMGA|Medtr5g044770.1	Aspartic proteinase nepenthesin-1 chr5 19234515-19233220 H EGN_Mt100125 20111014	GO:0006508|proteolysis GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010337|regulation of salicylic acid metabolic process GO:0042742|defense response to bacterium	GO:0004190|aspartic-type endopeptidase activity	GO:0005576|extracellular region GO:0048046|apoplast
pt2_06927	A	A2S	Potri.002G189100	Potri.002G189100(AS) Potri.002G188900(AS)	POPTR_0002s18990	sp|Q5W274|PDR3_TOBAC	Pleiotropic drug resistance protein 3 OS=Nicotiana tabacum GN=PDR3 PE=2 SV=1	AT3G53480.1	| Symbols: PIS1, PDR9, ATPDR9, ABCG37 | pleiotropic drug resistance 9 | chr3:19825366-19831644 FORWARD LENGTH=1450	LOC_Os02g32690.1	protein|pleiotropic drug resistance protein 15, putative, expressed	IMGA|Medtr5g070320.1	Pleiotropic drug resistance ABC transporter family protein chr5 28781263-28793818 H EGN_Mt100125 20111014	GO:0000041|transition metal ion transport GO:0006855|drug transmembrane transport GO:0009926|auxin polar transport GO:0010359|regulation of anion channel activity GO:0048364|root development GO:0071366|cellular response to indolebutyric acid stimulus	GO:0000166|nucleotide binding GO:0005215|transporter activity GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane
pt2_06928	A	A4S	Potri.002G189200	Potri.002G189200(AS) Potri.002G189000(AS) Potri.014G114700(BS) Potri.010G153500(DS)	POPTR_0002s19000	sp|A9P822|METK1_POPTR	S-adenosylmethionine synthase 1 OS=Populus trichocarpa GN=METK1 PE=2 SV=1	AT4G01850.2	| Symbols: SAM-2, MAT2, SAM2, AtSAM2 | S-adenosylmethionine synthetase 2 | chr4:796298-797479 REVERSE LENGTH=393	LOC_Os01g22010.4	protein|S-adenosylmethionine synthetase, putative, expressed	NA	NA	GO:0006556|S-adenosylmethionine biosynthetic process GO:0006970|response to osmotic stress GO:0046686|response to cadmium ion GO:0071281|cellular response to iron ion	GO:0004478|methionine adenosyltransferase activity GO:0005507|copper ion binding GO:0005524|ATP binding	GO:0005618|cell wall GO:0005730|nucleolus GO:0005737|cytoplasm GO:0005829|cytosol GO:0009506|plasmodesma GO:0070062|extracellular vesicular exosome
pt2_06929	A	A1S	Potri.002G189300	Potri.002G189300(AS)	POPTR_0002s19010	sp|P07369|CB2G_SOLLC	Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1	AT2G34430.1	| Symbols: LHB1B1, LHCB1.4 | light-harvesting chlorophyll-protein complex II subunit B1 | chr2:14524818-14525618 FORWARD LENGTH=266	LOC_Os09g17740.1	protein|chlorophyll A-B binding protein, putative, expressed	IMGA|Medtr5g097280.1	Chlorophyll a/b binding protein chr5 41563313-41564811 F EGN_Mt100125 20111014	GO:0009765|photosynthesis, light harvesting GO:0009769|photosynthesis, light harvesting in photosystem II GO:0015979|photosynthesis	GO:0016168|chlorophyll binding	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009579|thylakoid GO:0009941|chloroplast envelope GO:0010287|plastoglobule GO:0016020|membrane GO:0030076|light-harvesting complex GO:0042651|thylakoid membrane
pt2_06930	A	A1S	Potri.002G189400	Potri.002G189400(AS)	POPTR_0002s19020	sp|Q5XFW6|WDR6_RAT	WD repeat-containing protein 6 OS=Rattus norvegicus GN=Wdr6 PE=1 SV=2	AT4G01860.2	| Symbols: | Transducin family protein / WD-40 repeat family protein | chr4:801713-808018 REVERSE LENGTH=1308	LOC_Os03g02110.1	protein|WD domain, G-beta repeat domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0000166|nucleotide binding	GO:0005737|cytoplasm GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_06931	A	A1S	Potri.002G189600	Potri.002G189600(AS)	POPTR_0002s19030	sp|Q9LRP7|ATG8I_ARATH	Autophagy-related protein 8i OS=Arabidopsis thaliana GN=ATG8I PE=2 SV=1	AT3G15580.1	| Symbols: ATG8I, APG8H | Ubiquitin-like superfamily protein | chr3:5274075-5275000 REVERSE LENGTH=115	LOC_Os11g01010.1	protein|autophagy-related protein 8D, putative, expressed	NA	NA	GO:0006914|autophagy	GO:0008017|microtubule binding GO:0019776|Atg8 ligase activity GO:0019779|APG8 activating enzyme activity GO:0019786|APG8-specific protease activity	GO:0005737|cytoplasm GO:0005775|vacuolar lumen
pt2_06932	A	A1S	Potri.002G189700	Potri.002G189700(AS)	POPTR_0002s19040	sp|Q76PD2|YJ01_SCHPO	LIM domain and RING finger protein C1223.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1223.01 PE=1 SV=2	AT3G62240.1	| Symbols: | RING/U-box superfamily protein | chr3:23033592-23036653 REVERSE LENGTH=812	LOC_Os05g19970.1	protein|ZOS5-06 - C2H2 zinc finger protein, expressed	NA	NA	NA	GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_06933	A	A1S	Potri.002G189800	Potri.002G189800(AS)	POPTR_0002s19050	sp|Q9NUP7|TRM13_HUMAN	tRNA guanosine-2'-O-methyltransferase TRM13 homolog OS=Homo sapiens GN=CCDC76 PE=1 SV=2	AT4G01880.1	| Symbols: | methyltransferases | chr4:810810-812882 REVERSE LENGTH=453	LOC_Os03g61750.1	protein|expressed protein	NA	NA	GO:0008033|tRNA processing	GO:0008168|methyltransferase activity	GO:0005634|nucleus
pt2_06934	A	A1S	Potri.002G189900	Potri.002G189900(AS)	POPTR_0002s19060	sp|Q8S528|AL2B7_ARATH	Aldehyde dehydrogenase family 2 member B7, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B7 PE=2 SV=2	AT1G23800.1	| Symbols: ALDH2B7, ALDH2B | aldehyde dehydrogenase 2B7 | chr1:8412238-8414804 REVERSE LENGTH=534	LOC_Os06g15990.1	protein|aldehyde dehydrogenase, putative, expressed	IMGA|Medtr1g014320.1	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase chr1 3773177-3769070 E EGN_Mt100125 20111014	GO:0008152|metabolic process GO:0010228|vegetative to reproductive phase transition of meristem GO:0016926|protein desumoylation GO:0050665|hydrogen peroxide biosynthetic process GO:0055114|oxidation-reduction process	GO:0004028|3-chloroallyl aldehyde dehydrogenase activity GO:0004029|aldehyde dehydrogenase (NAD) activity GO:0016491|oxidoreductase activity	GO:0009507|chloroplast
pt2_06935	A	A2S	Potri.002G190000	Potri.002G190000(AS) Potri.001G025300(DS)	POPTR_0002s19070	sp|P62981|RS27A_SOLTU	Ubiquitin-40S ribosomal protein S27a OS=Solanum tuberosum GN=UBI3 PE=2 SV=2	AT2G47110.2	| Symbols: UBQ6 | ubiquitin 6 | chr2:19344701-19345174 FORWARD LENGTH=157	LOC_Os01g22490.1	protein|40S ribosomal protein S27a, putative, expressed	IMGA|Medtr5g033960.1	Ubiquitin chr5 14250866-14251520 F EGN_Mt100125 20111014	GO:0006412|translation GO:0006511|ubiquitin-dependent protein catabolic process GO:0042787|protein ubiquitination involved in ubiquitin-dependent protein catabolic process	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005794|Golgi apparatus GO:0005840|ribosome GO:0022627|cytosolic small ribosomal subunit
pt2_06936	A	A1S	Potri.002G190200	Potri.002G190200(AS)	POPTR_0002s19080	NA	NA	AT2G47115.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10660.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr2:19345376-19346864 REVERSE LENGTH=300	LOC_Os07g46430.2	protein|expressed protein	IMGA|Medtr1g086330.1	hypothetical protein chr1 22984322-22982548 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005576|extracellular region
pt2_06937	A	A1S	Potri.002G190300	Potri.002G190300(AS)	POPTR_0002s19090	NA	NA	AT1G02475.1	| Symbols: | Polyketide cyclase/dehydrase and lipid transport superfamily protein | chr1:514110-515331 REVERSE LENGTH=219	LOC_Os01g22510.1	protein|cyclase/dehydrase family protein, expressed	IMGA|Medtr1g086340.1	hypothetical protein chr1 22987687-22992250 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_06938	A	A1S	Potri.002G190400	Potri.002G190400(AS)	POPTR_0002s19100	sp|Q3EAF9|P2C49_ARATH	Probable protein phosphatase 2C 49 OS=Arabidopsis thaliana GN=At3g62260 PE=2 SV=1	AT3G62260.1	| Symbols: | Protein phosphatase 2C family protein | chr3:23038516-23040391 REVERSE LENGTH=383	LOC_Os05g04360.1	protein|protein phosphatase 2C, putative, expressed	IMGA|Medtr1g086350.1	hypothetical protein chr1 22995569-22993049 F EGN_Mt100125 20111014	GO:0006470|protein dephosphorylation GO:0010200|response to chitin	GO:0003824|catalytic activity GO:0004722|protein serine/threonine phosphatase activity	GO:0005739|mitochondrion GO:0008287|protein serine/threonine phosphatase complex
pt2_06939	A	A2S	Potri.002G190500	Potri.002G190500(AS) Potri.014G115600(DS)	POPTR_0002s19110	sp|P43288|KSG1_ARATH	Shaggy-related protein kinase alpha OS=Arabidopsis thaliana GN=ASK1 PE=2 SV=3	AT5G26751.1	| Symbols: ATSK11, SK 11 | shaggy-related kinase 11 | chr5:9399582-9401839 REVERSE LENGTH=405	LOC_Os01g14860.3	protein|CGMC_GSK.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	IMGA|Medtr1g084760.1	Glycogen synthase kinase chr1 22264811-22261004 F EGN_Mt100125 20111014	GO:0009933|meristem structural organization GO:0016310|phosphorylation GO:0042538|hyperosmotic salinity response	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity	GO:0005634|nucleus GO:0005829|cytosol
pt2_06940	A	A1S	Potri.002G190600	Potri.002G190600(AS)	POPTR_0002s19120	sp|Q949Z1|PGLR4_ARATH	Polygalacturonase At1g48100 OS=Arabidopsis thaliana GN=At1g48100 PE=2 SV=1	AT1G02460.1	| Symbols: | Pectin lyase-like superfamily protein | chr1:504897-507099 REVERSE LENGTH=491	LOC_Os05g20020.1	protein|polygalacturonase, putative, expressed	IMGA|Medtr5g034090.1	Polygalacturonase chr5 14308778-14313289 E EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0004650|polygalacturonase activity	GO:0005576|extracellular region
pt2_06941	A	A1S	Potri.002G190700	Potri.002G190700(AS)	POPTR_0002s19130	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06942	A	A1S	Potri.002G190800	Potri.002G190800(AS)	POPTR_0002s19140	NA	NA	NA	NA	NA	NA	NA	NA	GO:0000165|MAPK cascade GO:0001666|response to hypoxia GO:0002831|regulation of response to biotic stimulus GO:0006355|regulation of transcription, DNA-dependent GO:0006612|protein targeting to membrane GO:0009595|detection of biotic stimulus GO:0009617|response to bacterium GO:0009697|salicylic acid biosynthetic process GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010112|regulation of systemic acquired resistance GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0016045|detection of bacterium GO:0031347|regulation of defense response GO:0031348|negative regulation of defense response GO:0035304|regulation of protein dephosphorylation GO:0042742|defense response to bacterium GO:0043900|regulation of multi-organism process GO:0045087|innate immune response GO:0045088|regulation of innate immune response GO:0045892|negative regulation of transcription, DNA-dependent GO:0050776|regulation of immune response GO:0050832|defense response to fungus	GO:0005515|protein binding	GO:0005634|nucleus
pt2_06943	G	G1	NA	NA	POPTR_0002s19150	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06944	A	A1S	Potri.002G190900	Potri.002G190900(AS)	POPTR_0002s19160	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06945	A	A1S	Potri.002G191000	Potri.002G191000(AS)	POPTR_0002s19170	sp|Q8VYR7|BOR1_ARATH	Boron transporter 1 OS=Arabidopsis thaliana GN=BOR1 PE=1 SV=1	AT2G47160.1	| Symbols: BOR1 | HCO3- transporter family | chr2:19357740-19360787 REVERSE LENGTH=704	LOC_Os12g37840.1	protein|boron transporter protein, putative, expressed	NA	NA	GO:0006820|anion transport GO:0006826|iron ion transport GO:0010106|cellular response to iron ion starvation GO:0010167|response to nitrate GO:0015706|nitrate transport GO:0052541|plant-type cell wall cellulose metabolic process GO:0052546|cell wall pectin metabolic process	GO:0005452|inorganic anion exchanger activity GO:0015301|anion:anion antiporter activity	GO:0016020|membrane GO:0016021|integral to membrane
pt2_06946	A	A1S	Potri.002G191100	Potri.002G191100(AS)	POPTR_0002s19180	sp|O80522|GDL2_ARATH	GDSL esterase/lipase At1g09390 OS=Arabidopsis thaliana GN=At1g09390 PE=2 SV=1	AT1G09390.1	| Symbols: | GDSL-like Lipase/Acylhydrolase superfamily protein | chr1:3031264-3033415 FORWARD LENGTH=370	LOC_Os01g22780.2	protein|GDSL-like lipase/acylhydrolase, putative, expressed	IMGA|Medtr1g030220.1	Early nodulin chr1 8769562-8773292 E EGN_Mt100125 20111014	GO:0006114|glycerol biosynthetic process GO:0006629|lipid metabolic process	GO:0004091|carboxylesterase activity GO:0016788|hydrolase activity, acting on ester bonds	GO:0005576|extracellular region GO:0009570|chloroplast stroma
pt2_06947	A	A1S	Potri.002G191200	Potri.002G191200(AS)	POPTR_0002s19190	NA	NA	AT4G01897.1	| Symbols: | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF952 (InterPro:IPR009297); Has 763 Blast hits to 763 proteins in 180 species: Archae - 0; Bacteria - 351; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 383 (source: NCBI BLink). | chr4:820487-821466 REVERSE LENGTH=122	LOC_Os03g36630.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_06948	A	A1S	Potri.002G191200	Potri.002G191200(AS)	POPTR_0002s19190	NA	NA	AT4G01897.1	| Symbols: | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF952 (InterPro:IPR009297); Has 763 Blast hits to 763 proteins in 180 species: Archae - 0; Bacteria - 351; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 383 (source: NCBI BLink). | chr4:820487-821466 REVERSE LENGTH=122	LOC_Os03g36630.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_06949	A	A1S	Potri.002G191300	Potri.002G191300(AS)	POPTR_0002s19200	sp|Q9ZST4|GLNB_ARATH	Nitrogen regulatory protein P-II homolog OS=Arabidopsis thaliana GN=GLB1 PE=1 SV=1	AT4G01900.1	| Symbols: PII, GLB1 | GLNB1 homolog | chr4:821736-823294 FORWARD LENGTH=196	LOC_Os05g04220.1	protein|nitrogen regulatory protein P-II, putative, expressed	NA	NA	GO:0000096|sulfur amino acid metabolic process GO:0006546|glycine catabolic process GO:0006636|unsaturated fatty acid biosynthetic process GO:0006733|oxidoreduction coenzyme metabolic process GO:0006766|vitamin metabolic process GO:0006807|nitrogen compound metabolic process GO:0006808|regulation of nitrogen utilization GO:0006816|calcium ion transport GO:0007030|Golgi organization GO:0008652|cellular amino acid biosynthetic process GO:0009072|aromatic amino acid family metabolic process GO:0009106|lipoate metabolic process GO:0009108|coenzyme biosynthetic process GO:0009117|nucleotide metabolic process GO:0009409|response to cold GO:0009416|response to light stimulus GO:0009651|response to salt stress GO:0009695|jasmonic acid biosynthetic process GO:0009718|anthocyanin-containing compound biosynthetic process GO:0009744|response to sucrose stimulus GO:0009749|response to glucose stimulus GO:0009750|response to fructose stimulus GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019748|secondary metabolic process GO:0042304|regulation of fatty acid biosynthetic process GO:0044272|sulfur compound biosynthetic process GO:2000013|regulation of arginine biosynthetic process via ornithine	GO:0000287|magnesium ion binding GO:0005515|protein binding GO:0005524|ATP binding GO:0010307|acetylglutamate kinase regulator activity GO:0030234|enzyme regulator activity	GO:0005829|cytosol GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009536|plastid
pt2_06950	A	A1S	Potri.002G191400	Potri.002G191400(AS)	POPTR_0002s19210	sp|P51823|ARF2_ORYSJ	ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica GN=ARF PE=2 SV=2	AT5G14670.1	| Symbols: ATARFA1B, ARFA1B | ADP-ribosylation factor A1B | chr5:4729319-4730495 FORWARD LENGTH=188	LOC_Os05g41060.1	protein|ADP-ribosylation factor, putative, expressed	IMGA|Medtr5g034130.1	ADP-ribosylation factor chr5 14333942-14342285 F EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0007264|small GTPase mediated signal transduction GO:0046686|response to cadmium ion	GO:0005507|copper ion binding GO:0005525|GTP binding GO:0016004|phospholipase activator activity	GO:0005622|intracellular GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0005829|cytosol GO:0005886|plasma membrane GO:0016020|membrane
pt2_06951	A	A1S	Potri.002G191500	Potri.002G191500(AS)	POPTR_0002s19220	NA	NA	AT2G31430.1	| Symbols: | Plant invertase/pectin methylesterase inhibitor superfamily protein | chr2:13396293-13396911 FORWARD LENGTH=179	NA	NA	NA	NA	NA	GO:0004857|enzyme inhibitor activity GO:0030599|pectinesterase activity GO:0046910|pectinesterase inhibitor activity	GO:0005576|extracellular region
pt2_06952	A	A1S	Potri.002G191600	Potri.002G191600(AS)	POPTR_0002s19230	sp|Q5UNW1|YR707_MIMIV	Uncharacterized protein R707 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R707 PE=4 SV=1	AT2G47180.1	| Symbols: AtGolS1, GolS1 | galactinol synthase 1 | chr2:19369049-19370372 REVERSE LENGTH=344	LOC_Os03g20120.1	protein|glycosyl transferase 8 domain containing protein, putative, expressed	IMGA|Medtr1g084660.1	Galactinol synthase chr1 22219936-22218163 E EGN_Mt100125 20111014	GO:0006012|galactose metabolic process GO:0006979|response to oxidative stress GO:0009408|response to heat GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009644|response to high light intensity GO:0009651|response to salt stress GO:0009737|response to abscisic acid stimulus GO:0016051|carbohydrate biosynthetic process GO:0042542|response to hydrogen peroxide	GO:0016758|transferase activity, transferring hexosyl groups GO:0047216|inositol 3-alpha-galactosyltransferase activity	GO:0005575|cellular_component
pt2_06953	A	A1S	Potri.002G191700	Potri.002G191700(AS)	POPTR_0002s19240	sp|Q8LEK2|FA18_ARATH	Protein ECHIDNA OS=Arabidopsis thaliana GN=ECH PE=2 SV=1	AT1G09330.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF846, eukaryotic (InterPro:IPR008564); Has 518 Blast hits to 518 proteins in 206 species: Archae - 0; Bacteria - 0; Metazoa - 193; Fungi - 145; Plants - 73; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). | chr1:3013003-3014903 REVERSE LENGTH=186	LOC_Os01g22870.1	protein|expressed protein	IMGA|Medtr1g084620.1	"FAM18-like protein, putative" chr1 22192441-22189987 F EGN_Mt100125 20111014	GO:0007030|Golgi organization GO:0009306|protein secretion GO:0009826|unidimensional cell growth	GO:0003674|molecular_function	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0016021|integral to membrane
pt2_06954	A	A1S	Potri.002G191800	Potri.002G191800(AS)	POPTR_0002s19250	sp|P81391|MYB05_ANTMA	Myb-related protein 305 OS=Antirrhinum majus GN=MYB305 PE=2 SV=1	AT5G49620.1	| Symbols: AtMYB78, MYB78 | myb domain protein 78 | chr5:20137491-20139384 REVERSE LENGTH=307	LOC_Os05g04210.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr1g086510.1	Myb-like transcription factor chr1 23058938-23060452 F EGN_Mt100125 20111014	GO:0007165|signal transduction GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009611|response to wounding GO:0009651|response to salt stress GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009751|response to salicylic acid stimulus GO:0009753|response to jasmonic acid stimulus GO:0010260|organ senescence GO:0042538|hyperosmotic salinity response GO:0045893|positive regulation of transcription, DNA-dependent GO:0046686|response to cadmium ion	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005516|calmodulin binding	GO:0005634|nucleus
pt2_06955	A	A2S	Potri.002G191900	Potri.002G191900(AS) Potri.014G117300(DS)	POPTR_0002s19260	sp|Q9XHM5|G2OX2_PEA	Gibberellin 2-beta-dioxygenase 2 OS=Pisum sativum GN=GA2OX2 PE=2 SV=1	AT1G02400.1	| Symbols: ATGA2OX4, ATGA2OX6, DTA1, GA2OX6 | gibberellin 2-oxidase 6 | chr1:486964-489391 FORWARD LENGTH=329	LOC_Os05g06670.1	protein|gibberellin 2-oxidase, putative, expressed	IMGA|Medtr1g102070.1	Gibberellin 20-oxidase chr1 30326838-30328879 E EGN_Mt100125 20111014	GO:0009639|response to red or far red light GO:0010286|heat acclimation GO:0045487|gibberellin catabolic process GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors GO:0052634|C-19 gibberellin 2-beta-dioxygenase activity	GO:0005737|cytoplasm
pt2_06956	A	A1S	Potri.002G192000	Potri.002G192000(AS)	POPTR_0002s19270	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06957	C	C1S	Potri.002G192100	Potri.002G192100(CS)	sp|Q9LPX2|PPR39_ARATH	Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2 SV=1	AT1G12775.1	| Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:4353906-4355840 FORWARD LENGTH=644	LOC_Os10g35230.1	protein|Rf1, mitochondrial precursor, putative, expressed	IMGA|Medtr1g091210.1	Pentatricopeptide repeat-containing protein chr1 25270856-25272534 E EGN_Mt100125 20111014	NA	NA	GO:0005739|mitochondrion
pt2_06958	A	A1S	Potri.002G192200	Potri.002G192200(AS)	POPTR_0002s19290	sp|Q93W77|NIFU1_ARATH	NifU-like protein 1, chloroplastic OS=Arabidopsis thaliana GN=NIFU1 PE=1 SV=1	AT4G01940.1	| Symbols: NFU1, AtCNFU1 | NFU domain protein 1 | chr4:842265-843388 REVERSE LENGTH=231	LOC_Os03g20010.1	protein|nifU, putative, expressed	IMGA|Medtr5g094640.1	Cytochrome P450 71D10 chr5 40319837-40322609 H EGN_Mt100125 20111014	GO:0009658|chloroplast organization GO:0016226|iron-sulfur cluster assembly	GO:0005198|structural molecule activity GO:0005506|iron ion binding GO:0051536|iron-sulfur cluster binding	GO:0009507|chloroplast
pt2_06959	A	A1S	Potri.002G192300	Potri.002G192300(AS)	POPTR_0002s19300	NA	NA	AT1G26540.1	| Symbols: | Agenet domain-containing protein | chr1:9167783-9170795 REVERSE LENGTH=695	LOC_Os11g19730.1	protein|expressed protein	IMGA|Medtr5g089140.1	hypothetical protein chr5 37705025-37704585 H EGN_Mt100125 20111014	GO:0000226|microtubule cytoskeleton organization GO:0006260|DNA replication GO:0006306|DNA methylation GO:0006346|methylation-dependent chromatin silencing GO:0007267|cell-cell signaling GO:0007389|pattern specification process GO:0008150|biological_process GO:0008283|cell proliferation GO:0009616|virus induced gene silencing GO:0009855|determination of bilateral symmetry GO:0009887|organ morphogenesis GO:0009909|regulation of flower development GO:0009944|polarity specification of adaxial/abaxial axis GO:0010014|meristem initiation GO:0010050|vegetative phase change GO:0010051|xylem and phloem pattern formation GO:0010073|meristem maintenance GO:0010267|production of ta-siRNAs involved in RNA interference GO:0016570|histone modification GO:0031047|gene silencing by RNA GO:0031048|chromatin silencing by small RNA GO:0034968|histone lysine methylation GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0048438|floral whorl development GO:0048439|flower morphogenesis GO:0048449|floral organ formation GO:0048451|petal formation GO:0048453|sepal formation GO:0048519|negative regulation of biological process GO:0051225|spindle assembly GO:0051567|histone H3-K9 methylation	GO:0003723|RNA binding	GO:0005634|nucleus GO:0005773|vacuole
pt2_06960	R	R	NA	NA	POPTR_0002s19310	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06961	A	A1S	Potri.002G192400	Potri.002G192400(AS)	POPTR_0002s19330	sp|O22898|LACS1_ARATH	Long chain acyl-CoA synthetase 1 OS=Arabidopsis thaliana GN=LACS1 PE=2 SV=1	AT2G47240.2	| Symbols: LACS1 | AMP-dependent synthetase and ligase family protein | chr2:19393835-19397616 FORWARD LENGTH=660	LOC_Os05g04170.2	protein|AMP-binding enzyme, putative, expressed	IMGA|Medtr1g086600.1	Long chain fatty acid-CoA ligase chr1 23115804-23122111 F EGN_Mt100125 20111014	GO:0001676|long-chain fatty acid metabolic process GO:0006631|fatty acid metabolic process GO:0006633|fatty acid biosynthetic process GO:0009627|systemic acquired resistance GO:0010025|wax biosynthetic process GO:0010103|stomatal complex morphogenesis GO:0010143|cutin biosynthetic process GO:0034976|response to endoplasmic reticulum stress	GO:0003824|catalytic activity GO:0004467|long-chain fatty acid-CoA ligase activity GO:0031957|very long-chain fatty acid-CoA ligase activity	GO:0005575|cellular_component GO:0005634|nucleus GO:0005783|endoplasmic reticulum
pt2_06962	A	A2S	Potri.002G192500	Potri.002G192500(AS) Potri.014G117900(DS)	POPTR_0002s19340	sp|O22899|DHX15_ARATH	Probable pre-mRNA-splicing factor ATP-dependent RNA helicase OS=Arabidopsis thaliana GN=At2g47250 PE=2 SV=1	AT3G62310.1	| Symbols: | RNA helicase family protein | chr3:23057516-23060561 REVERSE LENGTH=726	LOC_Os03g19960.1	protein|ATP-dependent RNA helicase, putative, expressed	IMGA|Medtr1g114490.1	ATP-dependent RNA helicase DHX8 chr1 33201006-33207304 E EGN_Mt100125 20111014	GO:0009560|embryo sac egg cell differentiation	GO:0003676|nucleic acid binding GO:0003724|RNA helicase activity GO:0004386|helicase activity GO:0005524|ATP binding GO:0008026|ATP-dependent helicase activity	GO:0005634|nucleus GO:0005730|nucleolus GO:0005829|cytosol
pt2_06963	A	A1S	Potri.002G192600	Potri.002G192600(AS)	POPTR_0002s19350	sp|Q9SYJ2|GPAT3_ARATH	Probable glycerol-3-phosphate acyltransferase 3 OS=Arabidopsis thaliana GN=GPAT3 PE=2 SV=1	AT4G01950.1	| Symbols: ATGPAT3, GPAT3 | glycerol-3-phosphate acyltransferase 3 | chr4:844597-846710 REVERSE LENGTH=520	LOC_Os11g45400.1	protein|glycerol-3-phosphate acyltransferase, putative, expressed	IMGA|Medtr1g086650.1	hypothetical protein chr1 23146144-23144403 H EGN_Mt100125 20111014	GO:0006655|phosphatidylglycerol biosynthetic process GO:0008152|metabolic process	GO:0016746|transferase activity, transferring acyl groups	GO:0005739|mitochondrion
pt2_06964	G	G1	NA	NA	POPTR_0002s19360	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06965	A	A1S	Potri.002G192800	Potri.002G192800(AS)	POPTR_0002s19370	NA	NA	AT3G62330.1	| Symbols: | Zinc knuckle (CCHC-type) family protein | chr3:23063329-23065419 REVERSE LENGTH=479	LOC_Os01g14920.1	protein|zinc knuckle family protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003676|nucleic acid binding GO:0008270|zinc ion binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06966	A	A1S	Potri.002G192900	Potri.002G192900(AS)	POPTR_0002s19380	sp|O04425|FCA_ARATH	Flowering time control protein FCA OS=Arabidopsis thaliana GN=FCA PE=1 SV=2	AT2G47310.1	| Symbols: | flowering time control protein-related / FCA gamma-related | chr2:19423791-19426846 FORWARD LENGTH=512	LOC_Os09g03610.4	protein|flowering time control protein FCA, putative, expressed	IMGA|Medtr1g019150.1	Polyadenylate-binding protein chr1 5864665-5869890 F EGN_Mt100125 20111014	GO:0007062|sister chromatid cohesion GO:0009553|embryo sac development GO:0009790|embryo development GO:0009793|embryo development ending in seed dormancy GO:0009909|regulation of flower development GO:0010228|vegetative to reproductive phase transition of meristem GO:0031048|chromatin silencing by small RNA GO:0040029|regulation of gene expression, epigenetic GO:0045132|meiotic chromosome segregation GO:0048316|seed development	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0000785|chromatin GO:0005634|nucleus GO:0005737|cytoplasm
pt2_06967	A	A1S	Potri.002G192900	Potri.002G192900(AS)	POPTR_0002s19380	sp|O04425|FCA_ARATH	Flowering time control protein FCA OS=Arabidopsis thaliana GN=FCA PE=1 SV=2	AT2G47310.1	| Symbols: | flowering time control protein-related / FCA gamma-related | chr2:19423791-19426846 FORWARD LENGTH=512	LOC_Os09g03610.4	protein|flowering time control protein FCA, putative, expressed	IMGA|Medtr1g019150.1	Polyadenylate-binding protein chr1 5864665-5869890 F EGN_Mt100125 20111014	GO:0007062|sister chromatid cohesion GO:0009553|embryo sac development GO:0009790|embryo development GO:0009793|embryo development ending in seed dormancy GO:0009909|regulation of flower development GO:0010228|vegetative to reproductive phase transition of meristem GO:0031048|chromatin silencing by small RNA GO:0040029|regulation of gene expression, epigenetic GO:0045132|meiotic chromosome segregation GO:0048316|seed development	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0000785|chromatin GO:0005634|nucleus GO:0005737|cytoplasm
pt2_06968	A	A1S	Potri.002G192900	Potri.002G192900(AS)	POPTR_0002s19380	sp|O04425|FCA_ARATH	Flowering time control protein FCA OS=Arabidopsis thaliana GN=FCA PE=1 SV=2	AT2G47310.1	| Symbols: | flowering time control protein-related / FCA gamma-related | chr2:19423791-19426846 FORWARD LENGTH=512	LOC_Os09g03610.4	protein|flowering time control protein FCA, putative, expressed	IMGA|Medtr1g019150.1	Polyadenylate-binding protein chr1 5864665-5869890 F EGN_Mt100125 20111014	GO:0007062|sister chromatid cohesion GO:0009553|embryo sac development GO:0009790|embryo development GO:0009793|embryo development ending in seed dormancy GO:0009909|regulation of flower development GO:0010228|vegetative to reproductive phase transition of meristem GO:0031048|chromatin silencing by small RNA GO:0040029|regulation of gene expression, epigenetic GO:0045132|meiotic chromosome segregation GO:0048316|seed development	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0000785|chromatin GO:0005634|nucleus GO:0005737|cytoplasm
pt2_06969	A	A1S	Potri.002G193000	Potri.002G193000(AS)	POPTR_0002s19390	sp|O22900|WRK23_ARATH	Probable WRKY transcription factor 23 OS=Arabidopsis thaliana GN=WRKY23 PE=2 SV=1	AT2G47260.1	| Symbols: WRKY23, ATWRKY23 | WRKY DNA-binding protein 23 | chr2:19405045-19406446 REVERSE LENGTH=337	LOC_Os07g02060.1	protein|WRKY29, expressed	IMGA|Medtr1g086790.1	WRKY transcription factor chr1 23203731-23201879 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009624|response to nematode GO:0009733|response to auxin stimulus	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_06970	A	A1S	Potri.002G193100	Potri.002G193100(AS)	POPTR_0002s19400	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06971	A	A1S	Potri.002G193200	Potri.002G193200(AS)	POPTR_0002s19410	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06972	A	A1S	Potri.002G193300	Potri.002G193300(AS)	POPTR_0002s19420	sp|O22901|BH151_ARATH	Transcription factor UPBEAT1 OS=Arabidopsis thaliana GN=UPB1 PE=2 SV=1	AT2G47270.1	| Symbols: UPB1 | sequence-specific DNA binding transcription factors;transcription regulators | chr2:19411741-19412049 REVERSE LENGTH=102	NA	NA	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:2000280|regulation of root development	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_06973	C	C1S	Potri.002G193400	Potri.002G193400(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06974	G	G1	NA	NA	POPTR_0002s19440	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06975	G	G1	NA	NA	POPTR_0002s19445	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06976	A	A1S	Potri.002G193700	Potri.002G193700(AS)	POPTR_0002s19450	sp|Q93XK2|STSYN_PEA	Stachyose synthase OS=Pisum sativum GN=STS1 PE=1 SV=1	AT4G01970.1	| Symbols: AtSTS, STS | stachyose synthase | chr4:854073-856953 REVERSE LENGTH=876	LOC_Os01g07530.1	protein|uncharacterized glycosyltransferase, putative, expressed	IMGA|Medtr5g096820.1	Alkaline alpha galactosidase I chr5 41309474-41313612 F EGN_Mt100125 20111014	GO:0006979|response to oxidative stress GO:0080167|response to karrikin	GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0047268|galactinol-raffinose galactosyltransferase activity	GO:0005737|cytoplasm
pt2_06977	A	A1S	Potri.002G193800	Potri.002G193800(AS)	POPTR_0002s19460	NA	NA	AT2G47710.1	| Symbols: | Adenine nucleotide alpha hydrolases-like superfamily protein | chr2:19555045-19555956 REVERSE LENGTH=162	LOC_Os12g36640.2	protein|universal stress protein domain containing protein, putative, expressed	IMGA|Medtr1g088640.1	Universal stress protein chr1 24107303-24105561 F EGN_Mt100125 20111014	GO:0002238|response to molecule of fungal origin GO:0006950|response to stress	GO:0003674|molecular_function	GO:0005773|vacuole GO:0005794|Golgi apparatus GO:0005886|plasma membrane
pt2_06978	A	A2S	Potri.014G118500	Potri.014G118500(AS) Potri.002G193900(AS)	POPTR_0002s19470	sp|Q9SIC9|PP178_ARATH	Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidopsis thaliana GN=At2g31400 PE=2 SV=1	AT2G31400.1	| Symbols: GUN1 | genomes uncoupled 1 | chr2:13387201-13390550 REVERSE LENGTH=918	LOC_Os12g37550.1	protein|PPR repeat domain containing protein, putative, expressed	IMGA|Medtr5g095130.1	Pentatricopeptide repeat-containing protein chr5 40539476-40536629 H EGN_Mt100125 20111014	GO:0010019|chloroplast-nucleus signaling pathway GO:0031930|mitochondria-nucleus signaling pathway	GO:0003677|DNA binding	GO:0009507|chloroplast
pt2_06979	A	A1S	Potri.002G193900	Potri.002G193900(AS)	POPTR_0002s19470	sp|Q9SIC9|PP178_ARATH	Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidopsis thaliana GN=At2g31400 PE=2 SV=1	AT2G31400.1	| Symbols: GUN1 | genomes uncoupled 1 | chr2:13387201-13390550 REVERSE LENGTH=918	LOC_Os12g37550.1	protein|PPR repeat domain containing protein, putative, expressed	IMGA|Medtr5g095130.1	Pentatricopeptide repeat-containing protein chr5 40539476-40536629 H EGN_Mt100125 20111014	GO:0010019|chloroplast-nucleus signaling pathway GO:0031930|mitochondria-nucleus signaling pathway	GO:0003677|DNA binding	GO:0009507|chloroplast
pt2_06980	A	A1S	Potri.002G194000	Potri.002G194000(AS)	POPTR_0002s19480	sp|Q6GQT9|NOMO1_MOUSE	Nodal modulator 1 OS=Mus musculus GN=Nomo1 PE=1 SV=1	AT3G62360.1	| Symbols: | Carbohydrate-binding-like fold | chr3:23073020-23080455 REVERSE LENGTH=1227	LOC_Os01g19470.1	protein|nodal modulator 1 precursor, putative, expressed	NA	NA	GO:0006486|protein glycosylation GO:0006499|N-terminal protein myristoylation	GO:0030246|carbohydrate binding	GO:0005576|extracellular region GO:0005774|vacuolar membrane GO:0005783|endoplasmic reticulum GO:0005794|Golgi apparatus GO:0009505|plant-type cell wall
pt2_06981	A	A1S	Potri.002G194100	Potri.002G194100(AS)	POPTR_0002s19490	NA	NA	AT2G47300.3	| Symbols: | ribonuclease Ps | chr2:19419333-19422076 FORWARD LENGTH=659	LOC_Os11g45250.1	protein|ribonucleases P/MRP protein subunit POP1 containing protein, expressed	NA	NA	GO:0006364|rRNA processing	GO:0004526|ribonuclease P activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_06982	A	A1S	Potri.002G194200	Potri.002G194200(AS)	POPTR_0002s19500	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006457|protein folding	GO:0003755|peptidyl-prolyl cis-trans isomerase activity	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0005886|plasma membrane
pt2_06983	A	A1S	Potri.002G194300	Potri.002G194300(AS)	POPTR_0002s19510	NA	NA	NA	NA	NA	NA	IMGA|contig_109189_1.1	Peptidyl-prolyl cis-trans isomerase contig_109189 1686-48 H PREDN 20111014	GO:0006084|acetyl-CoA metabolic process GO:0006457|protein folding GO:0016126|sterol biosynthetic process GO:0016132|brassinosteroid biosynthetic process GO:0019344|cysteine biosynthetic process	GO:0003755|peptidyl-prolyl cis-trans isomerase activity	GO:0005739|mitochondrion GO:0005794|Golgi apparatus
pt2_06984	B	B1S	Potri.002G194400	Potri.002G194400(BS)	POPTR_0002s19520	sp|Q9FZ24|PPR4_ARATH	Pentatricopeptide repeat-containing protein At1g02370, mitochondrial OS=Arabidopsis thaliana GN=At1g02370 PE=2 SV=1	AT1G02370.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:474516-476383 FORWARD LENGTH=537	LOC_Os04g25410.1	protein|pentatricopeptide repeat domain containing protein, putative, expressed	IMGA|Medtr1g086820.1	Pentatricopeptide repeat-containing protein chr1 23230997-23228554 E EGN_Mt100125 20111014	GO:0006626|protein targeting to mitochondrion GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_06985	A	A2S	Potri.T164700	Potri.T164700(AS) Potri.002G194500(AS)	POPTR_0002s19530	NA	NA	AT4G01995.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:873075-874619 FORWARD LENGTH=258	LOC_Os05g04070.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_06986	A	A1S	Potri.002G194600	Potri.002G194600(AS)	POPTR_0002s19540	sp|O22907|RH24_ARATH	DEAD-box ATP-dependent RNA helicase 24 OS=Arabidopsis thaliana GN=RH24 PE=1 SV=2	AT2G47330.1	| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr2:19429083-19431617 REVERSE LENGTH=760	LOC_Os03g19530.1	protein|DEAD-box ATP-dependent RNA helicase, putative, expressed	IMGA|contig_74166_1.1	ATP dependent RNA helicase contig_74166 1-4555 F PREDN 20111014	NA	GO:0003676|nucleic acid binding GO:0004386|helicase activity GO:0005524|ATP binding GO:0008026|ATP-dependent helicase activity	GO:0005634|nucleus
pt2_06987	A	A1S	Potri.002G194700	Potri.002G194700(AS)	POPTR_0002s19550	sp|Q8RWW0|ALE2_ARATH	Receptor-like serine/threonine-protein kinase ALE2 OS=Arabidopsis thaliana GN=ALE2 PE=1 SV=1	AT4G02010.1	| Symbols: | Protein kinase superfamily protein | chr4:881457-885222 FORWARD LENGTH=725	LOC_Os01g14932.2	protein|NAK-like ser/thr protein kinase, putative, expressed	IMGA|Medtr1g086870.1	Protein kinase 2B chr1 23242777-23246932 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_06988	A	A2S	Potri.002G194800	Potri.002G194800(AS) Potri.002G194900(BS)	POPTR_0002s19560	NA	NA	AT1G02550.1	| Symbols: | Plant invertase/pectin methylesterase inhibitor superfamily protein | chr1:536483-537211 FORWARD LENGTH=242	NA	NA	NA	NA	NA	GO:0004857|enzyme inhibitor activity GO:0030599|pectinesterase activity GO:0046910|pectinesterase inhibitor activity	GO:0009507|chloroplast
pt2_06989	R	R	NA	NA	POPTR_0002s19570	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_06990	B	B2S	Potri.002G194900	Potri.002G194900(BS) Potri.002G194800(BS)	POPTR_0002s19590	NA	NA	AT1G02550.1	| Symbols: | Plant invertase/pectin methylesterase inhibitor superfamily protein | chr1:536483-537211 FORWARD LENGTH=242	NA	NA	NA	NA	NA	GO:0004857|enzyme inhibitor activity GO:0030599|pectinesterase activity GO:0046910|pectinesterase inhibitor activity	GO:0009507|chloroplast
pt2_06991	B	B1S	Potri.002G195000	Potri.002G195000(BS)	POPTR_0002s19600	NA	NA	AT1G02550.1	| Symbols: | Plant invertase/pectin methylesterase inhibitor superfamily protein | chr1:536483-537211 FORWARD LENGTH=242	NA	NA	NA	NA	NA	GO:0004857|enzyme inhibitor activity GO:0030599|pectinesterase activity GO:0046910|pectinesterase inhibitor activity	GO:0009507|chloroplast
pt2_06992	A	A1S	Potri.002G195100	Potri.002G195100(AS)	POPTR_0002s19610	NA	NA	AT2G47350.1	| Symbols: | HIT zinc finger ;PAPA-1-like conserved region | chr2:19434588-19437045 FORWARD LENGTH=486	LOC_Os12g37430.2	protein|PAPA-1-like conserved region family protein, expressed	NA	NA	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005634|nucleus GO:0005737|cytoplasm
pt2_06993	A	A1S	Potri.002G195200	Potri.002G195200(AS)	POPTR_0002s19620	sp|Q9S834|CLPP5_ARATH	ATP-dependent Clp protease proteolytic subunit 5, chloroplastic OS=Arabidopsis thaliana GN=CLPP5 PE=1 SV=1	AT1G02560.1	| Symbols: CLPP5, NCLPP5, NCLPP1 | nuclear encoded CLP protease 5 | chr1:538000-539805 FORWARD LENGTH=298	LOC_Os03g19510.1	protein|OsClp4 - Putative Clp protease homologue, expressed	IMGA|Medtr1g086940.1	ATP-dependent Clp protease proteolytic subunit chr1 23268149-23273759 F EGN_Mt100125 20111014	GO:0000023|maltose metabolic process GO:0006508|proteolysis GO:0018119|peptidyl-cysteine S-nitrosylation GO:0019252|starch biosynthetic process	GO:0004252|serine-type endopeptidase activity	GO:0009507|chloroplast GO:0009532|plastid stroma GO:0009534|chloroplast thylakoid GO:0009570|chloroplast stroma GO:0009579|thylakoid GO:0009840|chloroplastic endopeptidase Clp complex GO:0009941|chloroplast envelope
pt2_06994	A	A1S	Potri.002G195300	Potri.002G195300(AS)	POPTR_0002s19630	sp|O64747|WRK35_ARATH	Probable WRKY transcription factor 35 OS=Arabidopsis thaliana GN=WRKY35 PE=2 SV=1	AT2G34830.1	| Symbols: WRKY35, MEE24, AtWRKY35 | WRKY DNA-binding protein 35 | chr2:14693839-14696378 REVERSE LENGTH=427	LOC_Os04g50920.1	protein|WRKY37, expressed	IMGA|Medtr5g016610.1	WRKY transcription factor chr5 5721691-5723310 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006826|iron ion transport GO:0009555|pollen development GO:0009793|embryo development ending in seed dormancy GO:0010106|cellular response to iron ion starvation GO:0010167|response to nitrate GO:0015706|nitrate transport GO:0016132|brassinosteroid biosynthetic process	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_06995	A	A1S	Potri.002G195400	Potri.002G195400(AS)	POPTR_0002s19640	NA	NA	AT2G47360.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02570.1); Has 58 Blast hits to 55 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:19437820-19438731 FORWARD LENGTH=303	NA	NA	IMGA|Medtr1g086950.1	hypothetical protein chr1 23276415-23277519 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_06996	A	A2S	Potri.002G195500	Potri.002G195500(AS) Potri.012G037200(DS)	POPTR_0002s19650	sp|P49039|SUS2_SOLTU	Sucrose synthase OS=Solanum tuberosum PE=3 SV=1	AT1G73370.1	| Symbols: SUS6, ATSUS6 | sucrose synthase 6 | chr1:27584533-27588326 REVERSE LENGTH=942	LOC_Os02g58480.1	protein|sucrose synthase, putative, expressed	IMGA|Medtr5g076830.1	Sucrose synthase chr5 31774157-31779342 E EGN_Mt100125 20111014	GO:0001666|response to hypoxia GO:0005985|sucrose metabolic process GO:0005986|sucrose biosynthetic process GO:0009058|biosynthetic process GO:0019375|galactolipid biosynthetic process GO:0080165|callose deposition in phloem sieve plate	GO:0008194|UDP-glycosyltransferase activity GO:0016157|sucrose synthase activity	GO:0005618|cell wall GO:0009507|chloroplast
pt2_06997	A	A1S	Potri.002G195600	Potri.002G195600(AS)	POPTR_0002s19660	sp|Q8GXW1|RGL2_ARATH	DELLA protein RGL2 OS=Arabidopsis thaliana GN=RGL2 PE=1 SV=2	AT3G03450.1	| Symbols: RGL2 | RGA-like 2 | chr3:819636-821279 REVERSE LENGTH=547	LOC_Os03g49990.1	protein|GRAS family transcription factor domain containing protein, expressed	IMGA|contig_52215_1.1	GAI-like protein contig_52215 101-2211 F PREDN 20111014	GO:0009062|fatty acid catabolic process GO:0009651|response to salt stress GO:0009686|gibberellin biosynthetic process GO:0009723|response to ethylene stimulus GO:0009737|response to abscisic acid stimulus GO:0009739|response to gibberellin stimulus GO:0009740|gibberellic acid mediated signaling pathway GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009938|negative regulation of gibberellic acid mediated signaling pathway GO:0010029|regulation of seed germination GO:0010162|seed dormancy process GO:0010187|negative regulation of seed germination GO:0010325|raffinose family oligosaccharide biosynthetic process GO:0042538|hyperosmotic salinity response GO:0048444|floral organ morphogenesis GO:0048608|reproductive structure development GO:2000033|regulation of seed dormancy process GO:2000377|regulation of reactive oxygen species metabolic process	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_06998	A	A3S	Potri.002G195700	Potri.002G195700(AS) Potri.002G195800(AA) Potri.014G120100(DS)	POPTR_0002s19670	sp|Q9ZSM8|EZA1_ARATH	Histone-lysine N-methyltransferase EZA1 OS=Arabidopsis thaliana GN=EZA1 PE=2 SV=1	AT4G02020.1	| Symbols: EZA1, SWN, SDG10 | SET domain-containing protein | chr4:886693-891743 FORWARD LENGTH=856	LOC_Os03g19480.1	protein|SET domain containing protein, expressed	IMGA|Medtr1g086980.1	Histone-lysine N-methyltransferase EZA1 chr1 23284211-23294141 E EGN_Mt100125 20111014	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0006349|regulation of gene expression by genetic imprinting GO:0006355|regulation of transcription, DNA-dependent GO:0007267|cell-cell signaling GO:0009616|virus induced gene silencing GO:0009960|endosperm development GO:0010048|vernalization response GO:0010050|vegetative phase change GO:0010267|production of ta-siRNAs involved in RNA interference GO:0016571|histone methylation GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0043687|post-translational protein modification GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0003727|single-stranded RNA binding GO:0005515|protein binding	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_06999	A	A2S	Potri.002G195800	Potri.002G195800(AS) Potri.002G195700(AA)	POPTR_0002s19680	NA	NA	AT3G62390.1	| Symbols: TBL6 | TRICHOME BIREFRINGENCE-LIKE 6 | chr3:23087275-23089142 REVERSE LENGTH=475	LOC_Os03g19470.1	protein| proteins of unknown function domain containing protein, expressed	IMGA|Medtr5g059400.1	hypothetical protein chr5 23887742-23890576 H EGN_Mt100125 20111014	GO:0008150|biological_process	NA	NA
pt2_07000	A	A2S	Potri.002G195900	Potri.002G195900(AS) Potri.014G120500(BS)	POPTR_0002s19690	sp|Q9SXX7|COX5C_ORYSJ	Cytochrome c oxidase subunit 5C OS=Oryza sativa subsp. japonica GN=COX5C PE=3 SV=3	AT5G61310.4	| Symbols: | Cytochrome c oxidase subunit Vc family protein | chr5:24653543-24653737 REVERSE LENGTH=64	LOC_Os12g37419.1	protein|cytochrome c oxidase polypeptide Vc, putative, expressed	IMGA|Medtr1g087020.1	Cytochrome c oxidase subunit 5C chr1 23307961-23309600 F EGN_Mt100125 20111014	NA	GO:0004129|cytochrome-c oxidase activity	GO:0005739|mitochondrion GO:0005746|mitochondrial respiratory chain
pt2_07001	A	A1S	Potri.002G196000	Potri.002G196000(AS)	POPTR_0002s19700	sp|Q10MJ1|CGEP_ORYSJ	Probable glutamyl endopeptidase, chloroplastic OS=Oryza sativa subsp. japonica GN=GEP PE=2 SV=1	AT2G47390.1	| Symbols: | Prolyl oligopeptidase family protein | chr2:19442278-19446253 REVERSE LENGTH=961	LOC_Os03g19410.1	protein|OsPOP7 - Putative Prolyl Oligopeptidase homologue, expressed	NA	NA	GO:0006508|proteolysis	GO:0004252|serine-type endopeptidase activity GO:0008236|serine-type peptidase activity	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_07002	A	A2S	Potri.002G196100	Potri.002G196100(AS) Potri.014G120700(BS)	POPTR_0002s19710	sp|Q9LZP9|CP122_ARATH	Calvin cycle protein CP12-2, chloroplastic OS=Arabidopsis thaliana GN=CP12-2 PE=1 SV=1	AT3G62410.1	| Symbols: CP12-2, CP12 | CP12 domain-containing protein 2 | chr3:23091006-23091401 FORWARD LENGTH=131	LOC_Os03g19380.1	protein|calvin cycle protein CP12, putative, expressed	IMGA|Medtr1g087030.1	Calvin cycle protein CP12 chr1 23311845-23312564 F EGN_Mt100125 20111014	GO:0009416|response to light stimulus GO:0009637|response to blue light GO:0009644|response to high light intensity GO:0009744|response to sucrose stimulus GO:0010114|response to red light GO:0010155|regulation of proton transport GO:0010218|response to far red light GO:0018316|peptide cross-linking via L-cystine GO:0019253|reductive pentose-phosphate cycle GO:0034605|cellular response to heat GO:0070417|cellular response to cold GO:0071454|cellular response to anoxia GO:0080153|negative regulation of reductive pentose-phosphate cycle	GO:0005515|protein binding	GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0043234|protein complex
pt2_07003	A	A1S	Potri.002G196200	Potri.002G196200(AS)	POPTR_0002s19720	sp|P24068|OCS1_MAIZE	Ocs element-binding factor 1 OS=Zea mays GN=OBF1 PE=2 SV=2	AT3G62420.1	| Symbols: ATBZIP53, BZIP53 | basic region/leucine zipper motif 53 | chr3:23091844-23092284 REVERSE LENGTH=146	LOC_Os12g37415.1	protein|expressed protein	IMGA|Medtr5g015090.1	Protein ABSCISIC ACID-INSENSITIVE chr5 4932703-4932230 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006623|protein targeting to vacuole GO:0009267|cellular response to starvation GO:0016192|vesicle-mediated transport GO:0045893|positive regulation of transcription, DNA-dependent GO:2000693|positive regulation of seed maturation	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0043565|sequence-specific DNA binding GO:0046982|protein heterodimerization activity	GO:0005634|nucleus
pt2_07004	A	A2S	Potri.002G196300	Potri.002G196300(AS) Potri.014G120900(DS)	POPTR_0002s19740	sp|Q4V9Y0|FFR_XENTR	Protein fat-free homolog OS=Xenopus tropicalis GN=ffr PE=2 SV=1	AT4G02030.1	| Symbols: | Vps51/Vps67 family (components of vesicular transport) protein | chr4:892262-897175 FORWARD LENGTH=780	LOC_Os03g52770.1	protein|expressed protein	IMGA|Medtr1g087100.1	Fat-free-like protein chr1 23344015-23351935 E EGN_Mt100125 20111014	GO:0008150|biological_process GO:0030244|cellulose biosynthetic process GO:0042732|D-xylose metabolic process GO:0048193|Golgi vesicle transport	GO:0003674|molecular_function	GO:0005794|Golgi apparatus GO:0005829|cytosol
pt2_07005	A	A2S	Potri.002G196400	Potri.002G196400(AS) Potri.004G055200(DS)	POPTR_0002s19750	sp|Q9M7B8|C79D1_MANES	Valine N-monooxygenase 1 OS=Manihot esculenta GN=CYP79D1 PE=1 SV=1	AT5G05260.1	| Symbols: CYP79A2 | cytochrome p450 79a2 | chr5:1559778-1561765 REVERSE LENGTH=523	LOC_Os04g09430.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g070920.1	Cytochrome P450 chr5 29084191-29081597 E EGN_Mt100125 20111014	GO:0006569|tryptophan catabolic process GO:0009684|indoleacetic acid biosynthetic process GO:0019761|glucosinolate biosynthetic process GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0016709|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen GO:0019825|oxygen binding GO:0020037|heme binding	NA
pt2_07006	A	A1S	Potri.002G196500	Potri.002G196500(AS)	POPTR_0002s19760	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07007	A	A1S	Potri.002G196500	Potri.002G196500(AS)	POPTR_0002s19760	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07008	A	A1S	Potri.002G196500	Potri.002G196500(AS)	POPTR_0002s19760	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07009	A	A1S	Potri.002G196500	Potri.002G196500(AS)	POPTR_0002s19760	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07010	A	A1S	Potri.002G196500	Potri.002G196500(AS)	POPTR_0002s19760	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07011	A	A1S	Potri.002G196600	Potri.002G196600(AS)	POPTR_0002s19770	NA	NA	AT1G02610.1	| Symbols: | RING/FYVE/PHD zinc finger superfamily protein | chr1:553181-555854 REVERSE LENGTH=221	LOC_Os01g19800.1	protein|zinc finger, C3HC4 type, putative, expressed	IMGA|Medtr1g087150.1	E3 ubiquitin-protein ligase MARCH6 chr1 23396427-23394223 F EGN_Mt100125 20111014	NA	GO:0008270|zinc ion binding	GO:0005737|cytoplasm
pt2_07012	A	A1S	Potri.002G196700	Potri.002G196700(AS)	POPTR_0002s19780	sp|Q8LGG8|USPAL_ARATH	Universal stress protein A-like protein OS=Arabidopsis thaliana GN=At3g01520 PE=1 SV=2	AT3G62550.1	| Symbols: | Adenine nucleotide alpha hydrolases-like superfamily protein | chr3:23136194-23137074 FORWARD LENGTH=162	LOC_Os01g19820.3	protein|universal stress protein domain containing protein, putative, expressed	IMGA|Medtr1g088640.1	Universal stress protein chr1 24107303-24105561 F EGN_Mt100125 20111014	GO:0002238|response to molecule of fungal origin GO:0006950|response to stress	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005773|vacuole
pt2_07013	A	A1S	Potri.002G196800	Potri.002G196800(AS)	POPTR_0002s19790	sp|Q9M7X7|RL291_ARATH	60S ribosomal protein L29-1 OS=Arabidopsis thaliana GN=RPL29A PE=1 SV=1	AT3G06700.3	| Symbols: | Ribosomal L29e protein family | chr3:2117519-2117800 REVERSE LENGTH=61	LOC_Os05g28750.1	protein|60S ribosomal protein L29-2, putative, expressed	NA	NA	GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005737|cytoplasm GO:0005840|ribosome GO:0022625|cytosolic large ribosomal subunit
pt2_07014	A	A1S	Potri.002G196900	Potri.002G196900(AS)	POPTR_0002s19800	NA	NA	AT4G02090.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; Has 132 Blast hits to 132 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 132; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:923122-923730 FORWARD LENGTH=202	NA	NA	IMGA|Medtr1g087230.1	Multidrug resistance protein ABC transporter family protein chr1 23436252-23437022 E EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07015	A	A1S	Potri.002G197000	Potri.002G197000(AS)	POPTR_0002s19810	sp|Q93YR9|ARFP_ARATH	Auxin response factor 16 OS=Arabidopsis thaliana GN=ARF16 PE=2 SV=1	AT4G30080.1	| Symbols: ARF16 | auxin response factor 16 | chr4:14703369-14705564 REVERSE LENGTH=670	LOC_Os06g47150.4	protein|auxin response factor 18, putative, expressed	IMGA|Medtr1g094960.1	Auxin response factor chr1 27028985-27031714 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0007389|pattern specification process GO:0009725|response to hormone stimulus GO:0009733|response to auxin stimulus GO:0048829|root cap development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0035198|miRNA binding GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_07016	A	A1S	Potri.002G197100	Potri.002G197100(AS)	POPTR_0002s19820	sp|A4GYS0|ACCD_POPTR	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Populus trichocarpa GN=accD PE=3 SV=1	NA	NA	NA	NA	NA	NA	GO:0006091|generation of precursor metabolites and energy GO:0006354|DNA-dependent transcription, elongation GO:0006633|fatty acid biosynthetic process GO:0006730|one-carbon metabolic process GO:0015979|photosynthesis GO:0019684|photosynthesis, light reaction	GO:0003989|acetyl-CoA carboxylase activity GO:0005515|protein binding GO:0016874|ligase activity	GO:0009317|acetyl-CoA carboxylase complex GO:0009329|acetate CoA-transferase complex GO:0009507|chloroplast GO:0009536|plastid GO:0009941|chloroplast envelope GO:0016020|membrane
pt2_07017	A	A1S	Potri.002G197200	Potri.002G197200(AS)	POPTR_0002s19830	sp|Q94KD8|BXL2_ARATH	Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana GN=BXL2 PE=2 SV=1	AT1G02640.1	| Symbols: BXL2, ATBXL2 | beta-xylosidase 2 | chr1:564293-567580 FORWARD LENGTH=768	LOC_Os11g44950.2	protein|glycosyl hydrolase family 3 protein, putative, expressed	IMGA|Medtr5g030860.1	Beta-D-xylosidase chr5 12766808-12771719 E EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0046685|response to arsenic-containing substance	GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0005576|extracellular region GO:0009505|plant-type cell wall
pt2_07018	A	A1S	Potri.002G197300	Potri.002G197300(AS)	POPTR_0002s19840	NA	NA	AT4G02100.1	| Symbols: | Heat shock protein DnaJ with tetratricopeptide repeat | chr4:930228-932049 FORWARD LENGTH=546	LOC_Os03g19200.1	protein|DNAJ heat shock N-terminal domain-containing protein, putative, expressed	IMGA|Medtr1g087270.1	hypothetical protein chr1 23461020-23463327 E EGN_Mt100125 20111014	GO:0006457|protein folding	GO:0031072|heat shock protein binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07019	A	A1S	Potri.002G197400	Potri.002G197400(AS)	POPTR_0002s19850	sp|O04251|Y4211_ARATH	BRCT domain-containing protein At4g02110 OS=Arabidopsis thaliana GN=At4g02110 PE=1 SV=3	AT4G02110.1	| Symbols: | transcription coactivators | chr4:935191-940191 FORWARD LENGTH=1329	LOC_Os03g19190.1	protein|TOPBP1C - Similar to DNA replication protein TOPBP1 from, expressed	IMGA|Medtr1g087290.1	BRCT domain-containing protein chr1 23478990-23471395 H EGN_Mt100125 20111014	NA	GO:0003713|transcription coactivator activity	GO:0005622|intracellular GO:0005737|cytoplasm
pt2_07020	A	A1S	Potri.002G197500	Potri.002G197500(AS)	POPTR_0002s19860	NA	NA	AT4G34140.3	| Symbols: | D111/G-patch domain-containing protein | chr4:16350942-16354022 FORWARD LENGTH=501	LOC_Os01g07540.1	protein|G-patch domain containing protein, expressed	NA	NA	NA	GO:0003676|nucleic acid binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_07021	A	A1S	Potri.002G197600	Potri.002G197600(AS)	POPTR_0002s19870	sp|Q9ZSZ8|FIP37_ARATH	FKBP12-interacting protein of 37 kDa OS=Arabidopsis thaliana GN=FIP37 PE=1 SV=1	AT3G54170.1	| Symbols: ATFIP37, FIP37 | FKBP12 interacting protein 37 | chr3:20056848-20059396 FORWARD LENGTH=330	LOC_Os06g27970.1	protein|FKBP12-interacting protein of 37 kDa, putative, expressed	IMGA|contig_81428_1.1	Pre-mRNA-splicing regulator WTAP contig_81428 3476-1426 F PREDN 20111014	GO:0006396|RNA processing	GO:0005515|protein binding	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_07022	A	A1S	Potri.002G197700	Potri.002G197700(AS)	POPTR_0002s19880	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07023	A	A1S	Potri.002G197800	Potri.002G197800(AS)	POPTR_0002s19890	sp|Q6GPW4|TM205_XENLA	Transmembrane protein 205 OS=Xenopus laevis GN=tmem205 PE=2 SV=1	AT3G62580.1	| Symbols: | Late embryogenesis abundant protein (LEA) family protein | chr3:23146931-23147735 FORWARD LENGTH=213	LOC_Os11g44940.1	protein|seed maturation protein PM27, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005783|endoplasmic reticulum GO:0009507|chloroplast
pt2_07024	A	A1S	Potri.002G197900	Potri.002G197900(AS)	POPTR_0002s19900	NA	NA	AT1G02660.1	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr1:572187-574746 REVERSE LENGTH=713	LOC_Os01g15000.1	protein|lipase, putative, expressed	NA	NA	GO:0006629|lipid metabolic process	GO:0004806|triglyceride lipase activity	GO:0005576|extracellular region
pt2_07025	A	A1S	Potri.002G197900	Potri.002G197900(AS)	POPTR_0002s19900	NA	NA	AT1G02660.1	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr1:572187-574746 REVERSE LENGTH=713	LOC_Os01g15000.1	protein|lipase, putative, expressed	NA	NA	GO:0006629|lipid metabolic process	GO:0004806|triglyceride lipase activity	GO:0005576|extracellular region
pt2_07026	A	A2S	Potri.002G198000	Potri.002G198000(AS) Potri.T165400(AS)	POPTR_0002s19910	sp|Q6TUG0|DJB11_RAT	DnaJ homolog subfamily B member 11 OS=Rattus norvegicus GN=Dnajb11 PE=2 SV=1	AT3G62600.1	| Symbols: ATERDJ3B, ERDJ3B | DNAJ heat shock family protein | chr3:23151038-23153346 REVERSE LENGTH=346	LOC_Os05g06440.1	protein|dnaJ homolog subfamily B member 11 precursor, putative, expressed	IMGA|Medtr1g087580.1	DnaJ homolog subfamily B member chr1 23593677-23595860 H EGN_Mt100125 20111014	GO:0006457|protein folding GO:0006984|ER-nucleus signaling pathway GO:0009408|response to heat GO:0009627|systemic acquired resistance GO:0009644|response to high light intensity GO:0034976|response to endoplasmic reticulum stress GO:0042542|response to hydrogen peroxide GO:0052033|pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response GO:0071216|cellular response to biotic stimulus	GO:0031072|heat shock protein binding GO:0051082|unfolded protein binding	GO:0005737|cytoplasm GO:0005783|endoplasmic reticulum GO:0005788|endoplasmic reticulum lumen GO:0005886|plasma membrane
pt2_07027	A	A1S	Potri.002G198100	Potri.002G198100(AS)	POPTR_0002s19920	sp|P27898|MYBP_MAIZE	Myb-related protein P OS=Zea mays GN=P PE=2 SV=1	AT5G49330.1	| Symbols: MYB111, ATMYB111, PFG3 | myb domain protein 111 | chr5:19999147-20001293 REVERSE LENGTH=342	LOC_Os01g19970.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr5g078140.1	P-type R2R3 Myb protein chr5 32379000-32381283 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0051555|flavonol biosynthetic process	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_07028	A	A1S	Potri.002G198200	Potri.002G198200(AS)	POPTR_0002s19930	NA	NA	AT3G62620.3	| Symbols: | sucrose-phosphatase-related | chr3:23159845-23161606 FORWARD LENGTH=354	NA	NA	NA	NA	GO:0008150|biological_process	NA	GO:0009507|chloroplast
pt2_07029	A	A1S	Potri.002G198300	Potri.002G198300(AS)	POPTR_0002s19940	sp|P38661|PDIA6_MEDSA	Probable protein disulfide-isomerase A6 OS=Medicago sativa PE=2 SV=1	AT2G47470.1	| Symbols: ATPDIL2-1, UNE5, MEE30, PDI11, ATPDI11 | thioredoxin family protein | chr2:19481503-19483683 FORWARD LENGTH=361	LOC_Os01g23740.1	protein|OsPDIL2-2 protein disulfide isomerase PDIL2-2, expressed	IMGA|Medtr1g087520.1	Protein disulfide-isomerase chr1 23570259-23566680 E EGN_Mt100125 20111014	GO:0006094|gluconeogenesis GO:0006096|glycolysis GO:0006662|glycerol ether metabolic process GO:0009553|embryo sac development GO:0009567|double fertilization forming a zygote and endosperm GO:0009627|systemic acquired resistance GO:0009651|response to salt stress GO:0009793|embryo development ending in seed dormancy GO:0034976|response to endoplasmic reticulum stress GO:0045454|cell redox homeostasis GO:0046686|response to cadmium ion GO:0048868|pollen tube development	GO:0003756|protein disulfide isomerase activity GO:0009055|electron carrier activity GO:0015035|protein disulfide oxidoreductase activity GO:0016853|isomerase activity	GO:0005576|extracellular region GO:0005774|vacuolar membrane GO:0005783|endoplasmic reticulum GO:0009505|plant-type cell wall
pt2_07030	A	A1S	Potri.002G198400	Potri.002G198400(AS)	POPTR_0002s19950	NA	NA	AT2G25920.1	| Symbols: | BEST Arabidopsis thaliana protein match is: 3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein (TAIR:AT2G25910.2); Has 131 Blast hits to 125 proteins in 54 species: Archae - 0; Bacteria - 50; Metazoa - 12; Fungi - 12; Plants - 41; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). | chr2:11054425-11055916 REVERSE LENGTH=280	LOC_Os05g06420.1	protein|expressed protein	IMGA|Medtr1g087500.1	hypothetical protein chr1 23556478-23559784 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_07031	A	A1S	Potri.002G198500	Potri.002G198500(AS)	POPTR_0002s19960	sp|Q8KPU9|SYR_SYNE7	Arginine--tRNA ligase OS=Synechococcus elongatus (strain PCC 7942) GN=argS PE=3 SV=2	AT4G26300.1	| Symbols: emb1027 | Arginyl-tRNA synthetase, class Ic | chr4:13308400-13313109 REVERSE LENGTH=642	LOC_Os05g07030.1	protein|arginyl-tRNA synthetase, putative, expressed	IMGA|contig_211049_1.1	Arginyl-tRNA synthetase contig_211049 301-545 H PREDN 20111014	GO:0006164|purine nucleotide biosynthetic process GO:0006418|tRNA aminoacylation for protein translation GO:0006420|arginyl-tRNA aminoacylation GO:0009793|embryo development ending in seed dormancy GO:0010162|seed dormancy process GO:0010564|regulation of cell cycle process GO:0048366|leaf development GO:0048825|cotyledon development	GO:0000166|nucleotide binding GO:0004812|aminoacyl-tRNA ligase activity GO:0004814|arginine-tRNA ligase activity GO:0005524|ATP binding	GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_07032	A	A1S	Potri.002G198600	Potri.002G198600(AS)	POPTR_0002s19970	sp|Q05728|PUR5_ARATH	Phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic OS=Arabidopsis thaliana GN=PUR5 PE=2 SV=2	AT3G55010.2	| Symbols: ATPURM, PUR5 | phosphoribosylformylglycinamidine cyclo-ligase, chloroplast / phosphoribosyl-aminoimidazole synthetase / AIR synthase (PUR5) | chr3:20386818-20388549 FORWARD LENGTH=389	LOC_Os03g61600.1	protein|phosphoribosylformylglycinamidine synthase, putative, expressed	IMGA|Medtr5g093890.1	Phosphoribosylformylglycinamidine cyclo-ligase chr5 39954817-39958256 E EGN_Mt100125 20111014	GO:0006164|purine nucleotide biosynthetic process GO:0006189|'de novo' IMP biosynthetic process GO:0006744|ubiquinone biosynthetic process GO:0009165|nucleotide biosynthetic process GO:0009220|pyrimidine ribonucleotide biosynthetic process	GO:0003824|catalytic activity GO:0004641|phosphoribosylformylglycinamidine cyclo-ligase activity GO:0005507|copper ion binding GO:0005524|ATP binding	GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_07033	A	A1S	Potri.002G198700	Potri.002G198700(AS)	POPTR_0002s19980	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003743|translation initiation factor activity	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_07034	A	A1S	Potri.002G198800	Potri.002G198800(AS)	POPTR_0002s19990	NA	NA	AT5G38700.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible, LP.12 twelve leaves visible; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02170.1); Has 64 Blast hits to 64 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:15489690-15490238 FORWARD LENGTH=182	NA	NA	IMGA|Medtr1g087710.1	hypothetical protein chr1 23635996-23635203 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_07035	A	A1S	Potri.002G198900	Potri.002G198900(AS)	POPTR_0002s19995	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07036	A	A1S	Potri.002G199000	Potri.002G199000(AS)	POPTR_0002s20000	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07037	A	A2S	Potri.002G199100	Potri.002G199100(AS) Potri.014G123500(DS)	POPTR_0002s20010	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_07038	A	A1S	Potri.002G199200	Potri.002G199200(AS)	POPTR_0002s20020	sp|Q39265|ZFP6_ARATH	Zinc finger protein 6 OS=Arabidopsis thaliana GN=ZFP6 PE=2 SV=1	AT1G67030.1	| Symbols: ZFP6 | zinc finger protein 6 | chr1:25016644-25017237 FORWARD LENGTH=197	LOC_Os06g10470.1	protein|ZOS6-02 - C2H2 zinc finger protein, expressed	IMGA|Medtr5g055530.1	Zinc finger protein chr5 22321786-22320474 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006826|iron ion transport GO:0010106|cellular response to iron ion starvation GO:0010167|response to nitrate GO:0015706|nitrate transport	GO:0003676|nucleic acid binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0005634|nucleus GO:0022626|cytosolic ribosome
pt2_07039	A	A1S	Potri.002G199300	Potri.002G199300(AS)	POPTR_0002s20030	sp|Q9SY66|FRS11_ARATH	Protein FAR1-RELATED SEQUENCE 11 OS=Arabidopsis thaliana GN=FRS11 PE=2 SV=1	AT1G10240.1	| Symbols: FRS11 | FAR1-related sequence 11 | chr1:3356835-3359271 REVERSE LENGTH=680	LOC_Os04g36590.1	protein|transposon protein, putative, unclassified, expressed	IMGA|Medtr5g072190.1	FAR1-related protein chr5 29691355-29693862 H EGN_Mt100125 20111014	GO:0009639|response to red or far red light	GO:0008270|zinc ion binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07040	A	A1A	Potri.002G199400	Potri.002G199400(AA)	POPTR_0002s20040	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07041	A	A2S	Potri.002G199500	Potri.002G199500(AS) Potri.014G123800(DS)	POPTR_0002s20050	NA	NA	AT5G47900.6	| Symbols: | Protein of unknown function (DUF1624) | chr5:19392556-19394963 FORWARD LENGTH=340	LOC_Os02g32504.2	protein|heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed	IMGA|contig_163420_1.1	Heparan-alpha-glucosaminide N-acetyltransferase contig_163420 709-51 H PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005739|mitochondrion
pt2_07042	A	A1S	Potri.002G199600	Potri.002G199600(AS)	POPTR_0002s20060	sp|O22478|IMA_SOLLC	Importin subunit alpha OS=Solanum lycopersicum PE=2 SV=2	AT3G06720.2	| Symbols: AT-IMP, ATKAP ALPHA, AIMP ALPHA | importin alpha isoform 1 | chr3:2120559-2123555 FORWARD LENGTH=532	LOC_Os05g06350.1	protein|importin subunit alpha, putative, expressed	IMGA|Medtr1g083810.1	Importin subunit alpha-1 chr1 21826128-21821004 F EGN_Mt100125 20111014	GO:0006094|gluconeogenesis GO:0006606|protein import into nucleus GO:0006886|intracellular protein transport GO:0007010|cytoskeleton organization GO:0010498|proteasomal protein catabolic process GO:0048767|root hair elongation	GO:0005515|protein binding GO:0008565|protein transporter activity	GO:0005618|cell wall GO:0005634|nucleus GO:0005635|nuclear envelope GO:0005730|nucleolus GO:0005737|cytoplasm GO:0005829|cytosol
pt2_07043	A	A1S	Potri.002G199700	Potri.002G199700(AS)	POPTR_0002s20070	NA	NA	AT4G13030.1	| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr4:7607400-7609656 FORWARD LENGTH=481	LOC_Os05g19280.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07044	A	A1S	Potri.002G199800	Potri.002G199800(AS)	POPTR_0002s20080	sp|Q9FJ10|GAT16_ARATH	GATA transcription factor 16 OS=Arabidopsis thaliana GN=GATA16 PE=2 SV=1	AT5G49300.1	| Symbols: GATA16 | GATA transcription factor 16 | chr5:19984849-19985475 REVERSE LENGTH=139	LOC_Os03g61570.2	protein|expressed protein	IMGA|Medtr5g020230.1	GATA transcription factor chr5 7466090-7466881 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_07045	A	A1S	Potri.002G199900	Potri.002G199900(AS)	POPTR_0002s20090	sp|P23444|H1_MAIZE	Histone H1 OS=Zea mays PE=2 SV=2	AT2G30620.2	| Symbols: | winged-helix DNA-binding transcription factor family protein | chr2:13045360-13046267 FORWARD LENGTH=202	LOC_Os04g18090.1	protein|histone H1, putative, expressed	IMGA|Medtr5g021730.1	Histone H1 chr5 8210866-8210299 I EGN_Mt100125 20111014	GO:0006334|nucleosome assembly	GO:0003677|DNA binding	GO:0000786|nucleosome GO:0005634|nucleus GO:0005730|nucleolus GO:0005739|mitochondrion
pt2_07046	A	A1S	Potri.002G200000	Potri.002G200000(AS)	POPTR_0002s20100	NA	NA	AT2G47485.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G62650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr2:19486004-19486429 FORWARD LENGTH=141	LOC_Os01g20730.1	protein|expressed protein	NA	NA	NA	NA	GO:0005739|mitochondrion
pt2_07047	C	C1S	Potri.002G200100	Potri.002G200100(CS)	NA	NA	NA	NA	NA	NA	IMGA|Medtr1g012700.1	14 kDa proline-rich protein DC2.15 chr1 3041200-3040682 E EGN_Mt100125 20111014	GO:0006869|lipid transport GO:0050832|defense response to fungus	GO:0008289|lipid binding	NA
pt2_07048	A	A2S	Potri.002G200200	Potri.002G200200(AS) Potri.014G125000(DS)	POPTR_0002s20120	sp|Q8VYF4|GATL7_ARATH	Probable galacturonosyltransferase-like 7 OS=Arabidopsis thaliana GN=GATL7 PE=2 SV=1	AT3G62660.1	| Symbols: GATL7 | galacturonosyltransferase-like 7 | chr3:23173419-23174504 FORWARD LENGTH=361	LOC_Os03g18890.1	protein|glycosyl transferase 8 domain containing protein, putative, expressed	IMGA|Medtr5g036580.1	Glycosyltransferase CAZy family GT8 chr5 15539123-15537936 F EGN_Mt100125 20111014	GO:0016051|carbohydrate biosynthetic process	GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups GO:0047262|polygalacturonate 4-alpha-galacturonosyltransferase activity	GO:0005794|Golgi apparatus
pt2_07049	A	A1S	Potri.002G200300	Potri.002G200300(AS)	POPTR_0002s20130	sp|Q9SRW9|CSLD5_ARATH	Cellulose synthase-like protein D5 OS=Arabidopsis thaliana GN=CSLD5 PE=2 SV=1	AT1G02730.1	| Symbols: ATCSLD5, CSLD5, SOS6 | cellulose synthase-like D5 | chr1:594697-598473 REVERSE LENGTH=1181	LOC_Os12g36890.1	protein|CSLD4 - cellulose synthase-like family D, expressed	IMGA|Medtr5g029190.1	Cellulose synthase-like protein chr5 11949044-11944517 E EGN_Mt100125 20111014	GO:0000226|microtubule cytoskeleton organization GO:0000271|polysaccharide biosynthetic process GO:0000724|double-strand break repair via homologous recombination GO:0006970|response to osmotic stress GO:0009414|response to water deprivation GO:0009651|response to salt stress GO:0009965|leaf morphogenesis GO:0010583|response to cyclopentenone GO:0030244|cellulose biosynthetic process GO:0042127|regulation of cell proliferation GO:0048367|shoot development	GO:0016760|cellulose synthase (UDP-forming) activity GO:0046527|glucosyltransferase activity GO:0051753|mannan synthase activity	GO:0005794|Golgi apparatus GO:0016020|membrane
pt2_07050	A	A1S	Potri.002G200400	Potri.002G200400(AS)	POPTR_0002s20140	sp|O65359|SYP41_ARATH	Syntaxin-41 OS=Arabidopsis thaliana GN=SYP41 PE=1 SV=1	AT5G26980.2	| Symbols: SYP41, ATSYP41, ATTLG2A | syntaxin of plants 41 | chr5:9488724-9490604 REVERSE LENGTH=322	LOC_Os06g02570.1	protein|syntaxin, putative, expressed	IMGA|Medtr1g083790.1	Syntaxin chr1 21811948-21816930 E EGN_Mt100125 20111014	GO:0006623|protein targeting to vacuole GO:0006886|intracellular protein transport GO:0006891|intra-Golgi vesicle-mediated transport GO:0006944|cellular membrane fusion GO:0007030|Golgi organization GO:0007034|vacuolar transport GO:0009306|protein secretion GO:0010200|response to chitin GO:0010413|glucuronoxylan metabolic process GO:0016192|vesicle-mediated transport GO:0045492|xylan biosynthetic process GO:1900150|regulation of defense response to fungus	GO:0005484|SNAP receptor activity GO:0005515|protein binding	GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0030140|trans-Golgi network transport vesicle
pt2_07051	A	A1S	Potri.002G200500	Potri.002G200500(AS)	POPTR_0002s20160	sp|Q84J70|DI193_ARATH	Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Arabidopsis thaliana GN=DI19-3 PE=1 SV=1	AT3G05700.1	| Symbols: | Drought-responsive family protein | chr3:1682432-1684323 REVERSE LENGTH=223	LOC_Os05g28980.1	protein|drought induced 19 protein, putative, expressed	IMGA|Medtr1g083780.1	Protein DEHYDRATION-INDUCED-like protein chr1 21809500-21806901 E EGN_Mt100125 20111014	GO:0009414|response to water deprivation	NA	GO:0005634|nucleus
pt2_07052	A	A1S	Potri.002G200600	Potri.002G200600(AS)	POPTR_0002s20170	NA	NA	AT4G02210.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2). | chr4:974320-975917 REVERSE LENGTH=439	LOC_Os08g25050.1	protein|PIF-like orf1, putative, expressed	IMGA|Medtr5g022570.1	hypothetical protein chr5 8645082-8643479 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07053	A	A16S	Potri.002G200700	Potri.002G200700(AS) Potri.005G153700(BS) Potri.001G299100(BS) Potri.004G097600(BS) Potri.001G182200(BS) Potri.T098000(DS) Potri.001G393500(DS) Potri.001G297800(DS) Potri.018G075600(DS) Potri.014G026000(DS) Potri.003G006700(DS) Potri.008G176600(DS) Potri.015G012100(DS) Potri.017G062600(DS) Potri.001G278700(DS) Potri.001G402200(DS)	POPTR_0002s20180	NA	NA	AT5G05800.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 881 Blast hits to 512 proteins in 30 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 38; Plants - 833; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). | chr5:1743234-1744751 REVERSE LENGTH=449	LOC_Os12g10550.1	protein|transposon protein, putative, CACTA, En/Spm sub-class, expressed	IMGA|Medtr5g054570.1	PIF-like protein chr5 21936286-21937344 H EGN_Mt100125 20111014	GO:0008150|biological_process GO:0048573|photoperiodism, flowering	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_07054	A	A1S	Potri.002G200800	Potri.002G200800(AS)	POPTR_0002s20190	NA	NA	AT1G49920.1	| Symbols: | MuDR family transposase | chr1:18481798-18484233 REVERSE LENGTH=785	LOC_Os02g45510.1	protein|transposon protein, putative, unclassified, expressed	NA	NA	GO:0008150|biological_process	GO:0008270|zinc ion binding	GO:0005575|cellular_component
pt2_07055	A	A2S	Potri.002G200900	Potri.002G200900(AS) Potri.014G125600(DS)	POPTR_0002s20200	sp|P39953|YEA6_YEAST	Mitochondrial nicotinamide adenine dinucleotide transporter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YEA6 PE=1 SV=1	AT2G47490.1	| Symbols: ATNDT1, NDT1 | NAD+ transporter 1 | chr2:19487549-19489311 FORWARD LENGTH=312	LOC_Os05g28870.1	protein|mitochondrial carrier protein, putative, expressed	IMGA|Medtr1g087840.1	Mitochondrial folate transporter/carrier chr1 23710596-23716281 E EGN_Mt100125 20111014	GO:0006810|transport GO:0006839|mitochondrial transport GO:0043132|NAD transport GO:0055085|transmembrane transport	GO:0005215|transporter activity GO:0051724|NAD transporter activity	GO:0005739|mitochondrion GO:0005743|mitochondrial inner membrane GO:0031969|chloroplast membrane
pt2_07056	B	B2S	Potri.002G201000	Potri.002G201000(BS) Potri.014G125700(DS)	POPTR_0002s20210	sp|O81635|ATK4_ARATH	Kinesin-4 OS=Arabidopsis thaliana GN=ATK4 PE=1 SV=2	AT2G47500.1	| Symbols: | P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain | chr2:19493247-19497882 FORWARD LENGTH=983	LOC_Os03g18980.1	protein|kinesin motor domain containing protein, expressed	IMGA|Medtr1g083770.1	Kinesin-4 chr1 21805644-21797458 H EGN_Mt100125 20111014	NA	GO:0003777|microtubule motor activity GO:0005524|ATP binding	GO:0005737|cytoplasm
pt2_07057	A	A1S	Potri.002G201100	Potri.002G201100(AS)	POPTR_0002s20220	NA	NA	AT5G67080.1	| Symbols: MAPKKK19 | mitogen-activated protein kinase kinase kinase 19 | chr5:26772726-26773760 FORWARD LENGTH=344	LOC_Os01g50400.1	protein|STE_MEKK_ste11_MAP3K.5 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	IMGA|Medtr5g017110.1	Protein kinase-like protein chr5 5965464-5964403 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0009414|response to water deprivation GO:0009723|response to ethylene stimulus GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0035556|intracellular signal transduction GO:0042538|hyperosmotic salinity response	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_07058	G	G1	NA	NA	POPTR_0002s20225	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07059	A	A1S	Potri.002G201200	Potri.002G201200(AS)	POPTR_0002s20230	sp|Q2YDC9|PDCD2_BOVIN	Programmed cell death protein 2 OS=Bos taurus GN=PDCD2 PE=2 SV=1	AT4G02220.1	| Symbols: | zinc finger (MYND type) family protein / programmed cell death 2 C-terminal domain-containing protein | chr4:976728-978902 FORWARD LENGTH=418	LOC_Os03g18830.2	protein|programmed cell death protein 2, putative, expressed	NA	NA	NA	GO:0008270|zinc ion binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_07060	B	B11S	Potri.012G071800	Potri.012G071800(BS) Potri.001G196200(BS) Potri.004G114700(BS) Potri.015G049300(BS) Potri.006G151700(BS) Potri.018G052800(BS) Potri.002G190100(DS) Potri.004G053900(DS) Potri.014G190500(DS) Potri.011G118700(DS) Potri.004G126200(DS)	POPTR_0002s20235	NA	NA	AT3G22220.2	| Symbols: | hAT transposon superfamily | chr3:7839808-7842358 REVERSE LENGTH=761	LOC_Os05g24790.1	protein|transposon protein, putative, unclassified, expressed	IMGA|Medtr5g012510.1	hypothetical protein chr5 3512350-3509693 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003677|DNA binding GO:0046983|protein dimerization activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07061	A	A1S	Potri.002G201300	Potri.002G201300(AS)	POPTR_0002s20240	sp|P93033|FUM1_ARATH	Fumarate hydratase 1, mitochondrial OS=Arabidopsis thaliana GN=FUM1 PE=1 SV=2	AT2G47510.2	| Symbols: FUM1 | fumarase 1 | chr2:19498614-19502020 FORWARD LENGTH=492	LOC_Os03g21950.1	protein|fumarate hydratase, mitochondrial precursor, putative, expressed	NA	NA	GO:0006099|tricarboxylic acid cycle GO:0006106|fumarate metabolic process GO:0006979|response to oxidative stress GO:0009651|response to salt stress GO:0042128|nitrate assimilation GO:0048868|pollen tube development	GO:0003824|catalytic activity GO:0004333|fumarate hydratase activity GO:0005515|protein binding GO:0016829|lyase activity	GO:0005739|mitochondrion GO:0005829|cytosol GO:0045239|tricarboxylic acid cycle enzyme complex
pt2_07062	A	A1S	Potri.002G201400	Potri.002G201400(AS)	POPTR_0002s20250	sp|Q8IY37|DHX37_HUMAN	Probable ATP-dependent RNA helicase DHX37 OS=Homo sapiens GN=DHX37 PE=1 SV=1	AT1G33390.1	| Symbols: ATFAS4, FAS4 | RNA helicase family protein | chr1:12099738-12104108 REVERSE LENGTH=1237	LOC_Os02g50370.1	protein|helicase domain-containing protein, putative, expressed	IMGA|Medtr1g114490.1	ATP-dependent RNA helicase DHX8 chr1 33201006-33207304 E EGN_Mt100125 20111014	NA	GO:0003676|nucleic acid binding GO:0004386|helicase activity GO:0005524|ATP binding GO:0008026|ATP-dependent helicase activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07063	A	A1S	Potri.002G201500	Potri.002G201500(AS)	POPTR_0002s20260	sp|O81122|ETR1_MALDO	Ethylene receptor OS=Malus domestica GN=ETR1 PE=2 SV=1	AT2G40940.1	| Symbols: ERS1, ERS | ethylene response sensor 1 | chr2:17084635-17086819 REVERSE LENGTH=613	LOC_Os03g49500.1	protein|ethylene receptor, putative, expressed	IMGA|contig_103103_1.1	Ethylene receptor contig_103103 403-3225 E PREDN 20111014	GO:0002237|response to molecule of bacterial origin GO:0006952|defense response GO:0007165|signal transduction GO:0007623|circadian rhythm GO:0009408|response to heat GO:0009625|response to insect GO:0009651|response to salt stress GO:0009690|cytokinin metabolic process GO:0009723|response to ethylene stimulus GO:0009727|detection of ethylene stimulus GO:0009733|response to auxin stimulus GO:0009736|cytokinin mediated signaling pathway GO:0009737|response to abscisic acid stimulus GO:0009739|response to gibberellin stimulus GO:0009871|jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway GO:0010105|negative regulation of ethylene mediated signaling pathway GO:0010119|regulation of stomatal movement GO:0010182|sugar mediated signaling pathway GO:0016310|phosphorylation GO:0018106|peptidyl-histidine phosphorylation GO:0042742|defense response to bacterium GO:0050665|hydrogen peroxide biosynthetic process GO:0052544|defense response by callose deposition in cell wall GO:0071281|cellular response to iron ion GO:1900140|regulation of seedling development	GO:0000155|two-component sensor activity GO:0000156|two-component response regulator activity GO:0004673|protein histidine kinase activity GO:0004871|signal transducer activity GO:0004872|receptor activity GO:0005515|protein binding GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0042802|identical protein binding GO:0051740|ethylene binding	GO:0005783|endoplasmic reticulum GO:0005789|endoplasmic reticulum membrane GO:0016020|membrane
pt2_07064	A	A1S	Potri.002G201600	Potri.002G201600(AS)	POPTR_0002s20270	sp|P42736|RAP23_ARATH	Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana GN=RAP2-3 PE=1 SV=2	AT3G16770.1	| Symbols: RAP2.3, ATEBP, ERF72, EBP | ethylene-responsive element binding protein | chr3:5705784-5706768 FORWARD LENGTH=248	LOC_Os07g47790.1	protein|AP2 domain containing protein, expressed	IMGA|Medtr1g087920.1	Ethylene responsive transcription factor 2b chr1 23755953-23757256 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0034059|response to anoxia	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_07065	B	B1S	Potri.002G201700	Potri.002G201700(BS)	POPTR_0002s20280	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07066	A	A1S	Potri.002G201800	Potri.002G201800(AS)	POPTR_0002s20290	NA	NA	AT4G02270.1	| Symbols: RHS13 | root hair specific 13 | chr4:992383-992996 REVERSE LENGTH=165	NA	NA	IMGA|Medtr1g088110.1	hypothetical protein chr1 23839172-23841340 E EGN_Mt100125 20111014	GO:0006826|iron ion transport GO:0008150|biological_process GO:0010054|trichoblast differentiation GO:0010106|cellular response to iron ion starvation GO:0010167|response to nitrate GO:0015706|nitrate transport	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_07067	A	A1S	Potri.002G201900	Potri.002G201900(AS)	POPTR_0002s20300	NA	NA	AT2G47540.1	| Symbols: | Pollen Ole e 1 allergen and extensin family protein | chr2:19505901-19506504 FORWARD LENGTH=173	NA	NA	IMGA|Medtr1g088110.1	hypothetical protein chr1 23839172-23841340 E EGN_Mt100125 20111014	GO:0008150|biological_process GO:0048765|root hair cell differentiation	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_07068	A	A1S	Potri.002G202000	Potri.002G202000(AS)	POPTR_0002s20310	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07069	A	A1S	Potri.002G202000	Potri.002G202000(AS)	POPTR_0002s20310	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07070	A	A1S	Potri.002G202000	Potri.002G202000(AS)	POPTR_0002s20310	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07071	A	A1S	Potri.002G202100	Potri.002G202100(AS)	POPTR_0002s20320	sp|P49062|PGLR1_ARATH	Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana GN=PGA3 PE=2 SV=1	AT1G02790.1	| Symbols: PGA4 | polygalacturonase 4 | chr1:610681-612225 REVERSE LENGTH=422	LOC_Os06g40880.1	protein|polygalacturonase, putative, expressed	IMGA|Medtr1g088160.1	Polygalacturonase chr1 23856858-23855049 F EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0004650|polygalacturonase activity	GO:0005576|extracellular region
pt2_07072	A	A1S	Potri.002G202200	Potri.002G202200(AS)	POPTR_0002s20330	sp|P49062|PGLR1_ARATH	Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana GN=PGA3 PE=2 SV=1	AT1G02790.1	| Symbols: PGA4 | polygalacturonase 4 | chr1:610681-612225 REVERSE LENGTH=422	LOC_Os06g40880.1	protein|polygalacturonase, putative, expressed	IMGA|Medtr1g088160.1	Polygalacturonase chr1 23856858-23855049 F EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0004650|polygalacturonase activity	GO:0005576|extracellular region
pt2_07073	A	A1S	Potri.002G202300	Potri.002G202300(AS)	POPTR_0002s20340	sp|O24301|SUS2_PEA	Sucrose synthase 2 OS=Pisum sativum GN=SUS2 PE=2 SV=1	AT4G02280.1	| Symbols: SUS3, ATSUS3 | sucrose synthase 3 | chr4:995166-998719 FORWARD LENGTH=809	LOC_Os03g22120.1	protein|sucrose synthase, putative, expressed	IMGA|Medtr5g076830.1	Sucrose synthase chr5 31774157-31779342 E EGN_Mt100125 20111014	GO:0001666|response to hypoxia GO:0005982|starch metabolic process GO:0005985|sucrose metabolic process GO:0005986|sucrose biosynthetic process GO:0009414|response to water deprivation GO:0010431|seed maturation GO:0010555|response to mannitol stimulus GO:0019375|galactolipid biosynthetic process	GO:0008194|UDP-glycosyltransferase activity GO:0016157|sucrose synthase activity GO:0016757|transferase activity, transferring glycosyl groups	GO:0009507|chloroplast
pt2_07074	A	A1S	Potri.002G202400	Potri.002G202400(AS)	POPTR_0002s20350	sp|O81416|GUN17_ARATH	Endoglucanase 17 OS=Arabidopsis thaliana GN=At4g02290 PE=2 SV=1	AT4G02290.1	| Symbols: AtGH9B13, GH9B13 | glycosyl hydrolase 9B13 | chr4:1002654-1005125 REVERSE LENGTH=516	LOC_Os01g21070.1	protein|endoglucanase, putative, expressed	IMGA|Medtr1g088190.2	Endo-1 4-beta-glucanase chr1 23884544-23882398 F EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0010089|xylem development GO:0044036|cell wall macromolecule metabolic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0005576|extracellular region
pt2_07075	A	A1S	Potri.002G202500	Potri.002G202500(AS)	POPTR_0002s20370	sp|O81301|PME40_ARATH	Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana GN=PME40 PE=2 SV=1	AT4G02320.1	| Symbols: | Plant invertase/pectin methylesterase inhibitor superfamily | chr4:1022725-1026118 REVERSE LENGTH=518	LOC_Os07g47830.1	protein|pectinesterase, putative, expressed	IMGA|Medtr1g008140.1	Pectinesterase chr1 1318675-1315083 E EGN_Mt100125 20111014	GO:0006612|protein targeting to membrane GO:0006833|water transport GO:0009651|response to salt stress GO:0009750|response to fructose stimulus GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010363|regulation of plant-type hypersensitive response GO:0042545|cell wall modification	GO:0004857|enzyme inhibitor activity GO:0030599|pectinesterase activity	GO:0005576|extracellular region GO:0005618|cell wall GO:0005634|nucleus GO:0009505|plant-type cell wall
pt2_07076	A	A1S	Potri.002G202600	Potri.002G202600(AS)	POPTR_0002s20380	sp|Q9SRX4|PME7_ARATH	Probable pectinesterase/pectinesterase inhibitor 7 OS=Arabidopsis thaliana GN=PME7 PE=2 SV=1	AT1G02810.1	| Symbols: | Plant invertase/pectin methylesterase inhibitor superfamily | chr1:618284-620333 FORWARD LENGTH=579	LOC_Os01g20980.1	protein|pectinesterase, putative, expressed	IMGA|Medtr1g088330.1	Pectinesterase chr1 23949641-23947773 E EGN_Mt100125 20111014	GO:0042545|cell wall modification	GO:0004857|enzyme inhibitor activity GO:0030599|pectinesterase activity	GO:0005576|extracellular region GO:0005618|cell wall GO:0009505|plant-type cell wall
pt2_07077	A	A2S	Potri.002G202700	Potri.002G202700(AS) Potri.014G127200(DS)	POPTR_0002s20390	sp|P34914|HYES_MOUSE	Epoxide hydrolase 2 OS=Mus musculus GN=Ephx2 PE=1 SV=2	AT4G02340.1	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr4:1035722-1037403 FORWARD LENGTH=324	LOC_Os05g19150.1	protein|hydrolase, alpha/beta fold family domain containing protein, expressed	NA	NA	NA	GO:0003824|catalytic activity GO:0004301|epoxide hydrolase activity	GO:0005777|peroxisome
pt2_07078	A	A1S	Potri.002G202800	Potri.002G202800(AS)	POPTR_0002s20400	sp|P42791|RL182_ARATH	60S ribosomal protein L18-2 OS=Arabidopsis thaliana GN=RPL18B PE=1 SV=2	AT3G05590.1	| Symbols: RPL18 | ribosomal protein L18 | chr3:1621511-1622775 FORWARD LENGTH=187	LOC_Os03g22180.1	protein|60S ribosomal protein L18-3, putative, expressed	NA	NA	GO:0006412|translation GO:0009220|pyrimidine ribonucleotide biosynthetic process	GO:0003735|structural constituent of ribosome GO:0005515|protein binding	GO:0005622|intracellular GO:0005737|cytoplasm GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005840|ribosome GO:0005886|plasma membrane GO:0009507|chloroplast GO:0015934|large ribosomal subunit GO:0022625|cytosolic large ribosomal subunit
pt2_07079	A	A1S	Potri.002G202800	Potri.002G202800(AS)	POPTR_0002s20400	sp|P42791|RL182_ARATH	60S ribosomal protein L18-2 OS=Arabidopsis thaliana GN=RPL18B PE=1 SV=2	AT3G05590.1	| Symbols: RPL18 | ribosomal protein L18 | chr3:1621511-1622775 FORWARD LENGTH=187	LOC_Os03g22180.1	protein|60S ribosomal protein L18-3, putative, expressed	NA	NA	GO:0006412|translation GO:0009220|pyrimidine ribonucleotide biosynthetic process	GO:0003735|structural constituent of ribosome GO:0005515|protein binding	GO:0005622|intracellular GO:0005737|cytoplasm GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005840|ribosome GO:0005886|plasma membrane GO:0009507|chloroplast GO:0015934|large ribosomal subunit GO:0022625|cytosolic large ribosomal subunit
pt2_07080	A	A1S	Potri.002G202800	Potri.002G202800(AS)	POPTR_0002s20400	sp|P42791|RL182_ARATH	60S ribosomal protein L18-2 OS=Arabidopsis thaliana GN=RPL18B PE=1 SV=2	AT3G05590.1	| Symbols: RPL18 | ribosomal protein L18 | chr3:1621511-1622775 FORWARD LENGTH=187	LOC_Os03g22180.1	protein|60S ribosomal protein L18-3, putative, expressed	NA	NA	GO:0006412|translation GO:0009220|pyrimidine ribonucleotide biosynthetic process	GO:0003735|structural constituent of ribosome GO:0005515|protein binding	GO:0005622|intracellular GO:0005737|cytoplasm GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005840|ribosome GO:0005886|plasma membrane GO:0009507|chloroplast GO:0015934|large ribosomal subunit GO:0022625|cytosolic large ribosomal subunit
pt2_07081	C	C1S	Potri.002G202900	Potri.002G202900(CS)	NA	NA	NA	NA	NA	NA	IMGA|contig_53750_1.1	Fatty acid oxidation complex subunit alpha contig_53750 5019-50 E PREDN 20111014	GO:0006631|fatty acid metabolic process GO:0006635|fatty acid beta-oxidation GO:0007031|peroxisome organization GO:0008152|metabolic process GO:0009062|fatty acid catabolic process GO:0009407|toxin catabolic process GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0051788|response to misfolded protein GO:0055114|oxidation-reduction process GO:0080129|proteasome core complex assembly	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0003857|3-hydroxyacyl-CoA dehydrogenase activity GO:0004300|enoyl-CoA hydratase activity GO:0016491|oxidoreductase activity GO:0016508|long-chain-enoyl-CoA hydratase activity GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0050662|coenzyme binding	GO:0005618|cell wall GO:0005730|nucleolus GO:0005737|cytoplasm GO:0005777|peroxisome GO:0009506|plasmodesma
pt2_07082	A	A1S	Potri.002G203000	Potri.002G203000(AS)	POPTR_0002s20430	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07083	A	A1S	Potri.002G203100	Potri.002G203100(AS)	POPTR_0002s20440	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07084	A	A1S	Potri.002G203200	Potri.002G203200(AS)	POPTR_0002s20450	sp|Q9LXX6|EXOC6_ARATH	Probable exocyst complex component 6 OS=Arabidopsis thaliana GN=At3g56640 PE=2 SV=2	AT4G02350.1	| Symbols: SEC15B | exocyst complex component sec15B | chr4:1038157-1040571 FORWARD LENGTH=787	LOC_Os01g24950.2	protein|exocyst complex component 6, putative, expressed	IMGA|contig_163394_1.1	Exocyst complex component 6B contig_163394 4390-1327 E PREDN 20111014	GO:0000902|cell morphogenesis GO:0006623|protein targeting to vacuole GO:0006904|vesicle docking involved in exocytosis GO:0007033|vacuole organization GO:0009846|pollen germination GO:0009860|pollen tube growth GO:0016049|cell growth GO:0048193|Golgi vesicle transport	GO:0003674|molecular_function	GO:0000145|exocyst GO:0005829|cytosol GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane
pt2_07085	C	C1S	Potri.002G203300	Potri.002G203300(CS)	NA	NA	AT4G02370.1	| Symbols: | Protein of unknown function, DUF538 | chr4:1042458-1042961 FORWARD LENGTH=167	LOC_Os05g29900.1	protein|expressed protein	IMGA|Medtr1g088260.1	hypothetical protein chr1 23921808-23920318 E EGN_Mt100125 20111014	GO:0008150|biological_process GO:0048767|root hair elongation	NA	GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0009507|chloroplast
pt2_07086	A	A1S	Potri.002G203400	Potri.002G203400(AS)	POPTR_0002s20470	NA	NA	AT1G02816.1	| Symbols: | Protein of unknown function, DUF538 | chr1:621637-622137 FORWARD LENGTH=166	LOC_Os05g29900.1	protein|expressed protein	IMGA|Medtr1g088250.1	hypothetical protein chr1 23917515-23916686 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005576|extracellular region GO:0005773|vacuole GO:0005774|vacuolar membrane
pt2_07087	A	A2S	Potri.002G203500	Potri.002G203500(AS) Potri.014G127700(DS)	POPTR_0002s20480	sp|P32292|ARG2_VIGRR	Indole-3-acetic acid-induced protein ARG2 OS=Vigna radiata var. radiata GN=ARG2 PE=2 SV=1	AT4G02380.1	| Symbols: SAG21, AtLEA5 | senescence-associated gene 21 | chr4:1046414-1046807 REVERSE LENGTH=97	NA	NA	NA	NA	GO:0000165|MAPK cascade GO:0000302|response to reactive oxygen species GO:0006612|protein targeting to membrane GO:0006950|response to stress GO:0006979|response to oxidative stress GO:0009409|response to cold GO:0009605|response to external stimulus GO:0009611|response to wounding GO:0009738|abscisic acid mediated signaling pathway GO:0009790|embryo development GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010363|regulation of plant-type hypersensitive response GO:0016036|cellular response to phosphate starvation GO:0019375|galactolipid biosynthetic process GO:0030968|endoplasmic reticulum unfolded protein response GO:0031348|negative regulation of defense response GO:0042631|cellular response to water deprivation GO:0043069|negative regulation of programmed cell death GO:0050832|defense response to fungus	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_07088	B	B2S	Potri.002G203600	Potri.002G203600(BS) Potri.014G127800(DS)	POPTR_0002s20490	sp|Q39244|RU1A_ARATH	U1 small nuclear ribonucleoprotein A OS=Arabidopsis thaliana GN=U1A PE=1 SV=1	AT2G47580.1	| Symbols: U1A | spliceosomal protein U1A | chr2:19517229-19518686 FORWARD LENGTH=250	LOC_Os05g06280.1	protein|ATKINESIN-13A/KINESIN-13A, putative, expressed	IMGA|Medtr5g074430.1	U1 small nuclear ribonucleoprotein A chr5 30637348-30631122 F EGN_Mt100125 20111014	GO:0000398|mRNA splicing, via spliceosome GO:0009651|response to salt stress	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005634|nucleus GO:0005685|U1 snRNP GO:0005730|nucleolus GO:0005829|cytosol
pt2_07089	A	A2S	Potri.002G203700	Potri.002G203700(AS) Potri.014G128300(DS)	POPTR_0002s20500	sp|P87137|YDM6_SCHPO	Uncharacterized protein C57A7.06 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC57A7.06 PE=1 SV=1	AT4G02400.1	| Symbols: | U3 ribonucleoprotein (Utp) family protein | chr4:1054243-1057884 FORWARD LENGTH=855	LOC_Os03g22320.1	protein|utp14 protein, putative, expressed	IMGA|contig_186867_1.1	Unknown protein contig_186867 1478-297 H PREDN 20111014	GO:0006364|rRNA processing GO:0006406|mRNA export from nucleus GO:0006606|protein import into nucleus GO:0009909|regulation of flower development	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_07090	G	G1	NA	NA	POPTR_0002s20510	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07091	A	A1S	Potri.002G203900	Potri.002G203900(AS)	POPTR_0002s20520	sp|A0QM57|Y4873_MYCA1	Putative S-adenosyl-L-methionine-dependent methyltransferase MAV_4873 OS=Mycobacterium avium (strain 104) GN=MAV_4873 PE=3 SV=1	AT4G02405.1	| Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr4:1057999-1059671 REVERSE LENGTH=333	LOC_Os07g14350.1	protein|methyltransferase, putative, expressed	NA	NA	NA	GO:0008168|methyltransferase activity	NA
pt2_07092	A	A1S	Potri.002G204000	Potri.002G204000(AS)	POPTR_0002s20530	sp|Q8LB72|PHR2_ARATH	Blue-light photoreceptor PHR2 OS=Arabidopsis thaliana GN=PHR2 PE=2 SV=2	AT2G47590.1	| Symbols: PHR2 | photolyase/blue-light receptor 2 | chr2:19521888-19523732 FORWARD LENGTH=447	LOC_Os03g22330.1	protein|blue-light photoreceptor PHR2, putative, expressed	IMGA|Medtr1g088420.1	DNA photolyase protein chr1 23995430-24000185 F EGN_Mt100125 20111014	GO:0000023|maltose metabolic process GO:0006281|DNA repair GO:0006655|phosphatidylglycerol biosynthetic process GO:0016117|carotenoid biosynthetic process GO:0019252|starch biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway	GO:0003913|DNA photolyase activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07093	A	A1S	Potri.002G204000	Potri.002G204000(AS)	POPTR_0002s20530	sp|Q8LB72|PHR2_ARATH	Blue-light photoreceptor PHR2 OS=Arabidopsis thaliana GN=PHR2 PE=2 SV=2	AT2G47590.1	| Symbols: PHR2 | photolyase/blue-light receptor 2 | chr2:19521888-19523732 FORWARD LENGTH=447	LOC_Os03g22330.1	protein|blue-light photoreceptor PHR2, putative, expressed	IMGA|Medtr1g088420.1	DNA photolyase protein chr1 23995430-24000185 F EGN_Mt100125 20111014	GO:0000023|maltose metabolic process GO:0006281|DNA repair GO:0006655|phosphatidylglycerol biosynthetic process GO:0016117|carotenoid biosynthetic process GO:0019252|starch biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway	GO:0003913|DNA photolyase activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07094	A	A2S	Potri.002G204100	Potri.002G204100(AS) Potri.014G128800(DS)	POPTR_0002s20540	sp|Q9M9W1|RL222_ARATH	60S ribosomal protein L22-2 OS=Arabidopsis thaliana GN=RPL22B PE=2 SV=1	AT3G05560.3	| Symbols: | Ribosomal L22e protein family | chr3:1614641-1615204 FORWARD LENGTH=124	LOC_Os07g47710.1	protein|60S ribosomal protein L22-2, putative, expressed	NA	NA	GO:0001510|RNA methylation GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005730|nucleolus GO:0005737|cytoplasm GO:0005829|cytosol GO:0005840|ribosome GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0022625|cytosolic large ribosomal subunit GO:0022626|cytosolic ribosome
pt2_07095	A	A1S	Potri.002G204200	Potri.002G204200(AS)	POPTR_0002s20550	sp|Q99685|MGLL_HUMAN	Monoglyceride lipase OS=Homo sapiens GN=MGLL PE=1 SV=2	AT2G47630.1	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr2:19534637-19536911 FORWARD LENGTH=351	LOC_Os05g29974.1	protein|lipase, putative, expressed	IMGA|Medtr1g110670.2	Monoglyceride lipase chr1 32662681-32665541 F EGN_Mt100125 20111014	NA	GO:0003824|catalytic activity	GO:0005886|plasma membrane
pt2_07096	A	A2S	Potri.002G204300	Potri.002G204300(AS) Potri.014G129100(DS)	POPTR_0002s20560	sp|Q9VI10|SMD2_DROME	Probable small nuclear ribonucleoprotein Sm D2 OS=Drosophila melanogaster GN=SmD2 PE=3 SV=1	AT3G62840.2	| Symbols: | Small nuclear ribonucleoprotein family protein | chr3:23235727-23236615 REVERSE LENGTH=108	LOC_Os05g24970.2	protein|LSM domain containing protein, expressed	IMGA|Medtr5g097030.1	Small nuclear ribonucleoprotein-like protein chr5 41429945-41432150 F EGN_Mt100125 20111014	GO:0001510|RNA methylation	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005730|nucleolus GO:0005732|small nucleolar ribonucleoprotein complex GO:0005829|cytosol
pt2_07097	A	A2S	Potri.002G204400	Potri.002G204400(AS) Potri.014G129200(DS)	POPTR_0002s20570	sp|Q8NBZ7|UXS1_HUMAN	UDP-glucuronic acid decarboxylase 1 OS=Homo sapiens GN=UXS1 PE=1 SV=1	AT3G62830.2	| Symbols: UXS2, ATUXS2 | NAD(P)-binding Rossmann-fold superfamily protein | chr3:23232539-23235353 FORWARD LENGTH=445	LOC_Os07g47700.1	protein|NAD dependent epimerase/dehydratase family domain containing protein, expressed	IMGA|contig_164943_1.1	Dtdp-glucose 4 6-dehydratase contig_164943 3364-208 F PREDN 20111014	GO:0009225|nucleotide-sugar metabolic process GO:0019305|dTDP-rhamnose biosynthetic process GO:0042732|D-xylose metabolic process GO:0044237|cellular metabolic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0008460|dTDP-glucose 4,6-dehydratase activity GO:0048040|UDP-glucuronate decarboxylase activity GO:0050662|coenzyme binding	GO:0000139|Golgi membrane GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0005886|plasma membrane GO:0016020|membrane
pt2_07098	G	G8	NA	NA	POPTR_0002s20580	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07099	A	A1S	Potri.002G204500	Potri.002G204500(AS)	POPTR_0002s20590	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process GO:0048573|photoperiodism, flowering	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_07100	A	A4S	Potri.002G204600	Potri.002G204600(AS) Potri.001G195500(DS) Potri.015G137700(DS) Potri.005G129300(DS)	POPTR_0002s20600	NA	NA	AT4G10890.1	| Symbols: | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2439 (InterPro:IPR018838); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:6688833-6692937 FORWARD LENGTH=527	LOC_Os01g33990.1	protein|transposon protein, putative, CACTA, En/Spm sub-class, expressed	IMGA|Medtr1g059320.1	hypothetical protein chr1 15361664-15360985 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07101	A	A1S	Potri.002G204700	Potri.002G204700(AS)	POPTR_0002s20610	NA	NA	AT4G02425.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 29 Blast hits to 28 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:1067531-1068663 REVERSE LENGTH=262	LOC_Os01g21410.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_07102	A	A1S	Potri.002G204800	Potri.002G204800(AS)	POPTR_0002s20620	sp|Q9LZI6|NDS5B_ARATH	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B OS=Arabidopsis thaliana GN=At3g62790 PE=2 SV=1	AT3G62790.1	| Symbols: | NADH-ubiquinone oxidoreductase-related | chr3:23223321-23224221 REVERSE LENGTH=83	LOC_Os08g44250.1	protein|fiber protein Fb14, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005739|mitochondrion GO:0005747|mitochondrial respiratory chain complex I
pt2_07103	A	A1S	Potri.002G204900	Potri.002G204900(AS)	POPTR_0002s20630	sp|Q9ASU7|PPAN_ARATH	Peter Pan-like protein OS=Arabidopsis thaliana GN=PPAN PE=1 SV=1	AT5G61770.1	| Symbols: PPAN | PETER PAN-like protein | chr5:24815888-24817495 FORWARD LENGTH=345	LOC_Os03g22350.1	protein|Brix domain containing protein, putative, expressed	NA	NA	NA	NA	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07104	G	G1	NA	NA	POPTR_0002s20640	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07105	A	A3S	Potri.T134200	Potri.T134200(AS) Potri.002G205000(AS) Potri.014G129900(DS)	POPTR_0002s20650	sp|O22315|SRSF1_ARATH	Pre-mRNA-splicing factor SF2 OS=Arabidopsis thaliana GN=SF2 PE=1 SV=1	AT1G02840.3	| Symbols: SR1, ATSRP34, SRP34, SR34, At-SR34 | RNA-binding (RRM/RBD/RNP motifs) family protein | chr1:626918-629583 FORWARD LENGTH=303	LOC_Os07g47630.2	protein|RNA recognition motif containing protein, expressed	IMGA|Medtr1g088180.1	Serine/arginine-rich splicing factor chr1 23874291-23867437 E EGN_Mt100125 20111014	GO:0000398|mRNA splicing, via spliceosome GO:0000956|nuclear-transcribed mRNA catabolic process	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding GO:0005515|protein binding	GO:0005634|nucleus GO:0016607|nuclear speck GO:0035061|interchromatin granule
pt2_07106	A	A2S	Potri.002G205100	Potri.002G205100(AS) Potri.T134200(AS)	POPTR_0002s20650	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07107	A	A1S	Potri.T134200	Potri.T134200(AS)	POPTR_0002s20650	sp|O22315|SRSF1_ARATH	Pre-mRNA-splicing factor SF2 OS=Arabidopsis thaliana GN=SF2 PE=1 SV=1	AT1G02840.3	| Symbols: SR1, ATSRP34, SRP34, SR34, At-SR34 | RNA-binding (RRM/RBD/RNP motifs) family protein | chr1:626918-629583 FORWARD LENGTH=303	LOC_Os07g47630.2	protein|RNA recognition motif containing protein, expressed	IMGA|Medtr1g088180.1	Serine/arginine-rich splicing factor chr1 23874291-23867437 E EGN_Mt100125 20111014	GO:0000398|mRNA splicing, via spliceosome GO:0000956|nuclear-transcribed mRNA catabolic process	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding GO:0005515|protein binding	GO:0005634|nucleus GO:0016607|nuclear speck GO:0035061|interchromatin granule
pt2_07108	A	A2S	Potri.002G205200	Potri.002G205200(AS) Potri.T134300(AS)	POPTR_0002s20660	sp|Q8LEA8|EID1_ARATH	Phytochrome A-associated F-box protein OS=Arabidopsis thaliana GN=EID1 PE=1 SV=2	AT4G02440.1	| Symbols: EID1 | F-box family protein | chr4:1072555-1073565 FORWARD LENGTH=336	LOC_Os05g30190.1	protein|phytochrome A-associated F-box protein, putative, expressed	NA	NA	GO:0006511|ubiquitin-dependent protein catabolic process GO:0009585|red, far-red light phototransduction GO:0010099|regulation of photomorphogenesis GO:0032880|regulation of protein localization GO:0042752|regulation of circadian rhythm GO:0048366|leaf development GO:0048573|photoperiodism, flowering	GO:0004842|ubiquitin-protein ligase activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_07109	A	A2S	Potri.002G205300	Potri.002G205300(AS) Potri.002G193800(DS)	POPTR_0002s20670	NA	NA	AT2G47710.1	| Symbols: | Adenine nucleotide alpha hydrolases-like superfamily protein | chr2:19555045-19555956 REVERSE LENGTH=162	LOC_Os12g36640.2	protein|universal stress protein domain containing protein, putative, expressed	IMGA|Medtr1g088640.1	Universal stress protein chr1 24107303-24105561 F EGN_Mt100125 20111014	GO:0002238|response to molecule of fungal origin GO:0006950|response to stress	GO:0003674|molecular_function	GO:0005773|vacuole GO:0005794|Golgi apparatus GO:0005886|plasma membrane
pt2_07110	G	G2	NA	NA	POPTR_0002s20680	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07111	A	A1S	Potri.002G205400	Potri.002G205400(AS)	POPTR_0002s20690	sp|B8B5U8|BAHL2_ORYSI	Probable E3 ubiquitin-protein ligase BAH1-like 1 OS=Oryza sativa subsp. indica GN=OsI_27296 PE=3 SV=1	AT1G02860.1	| Symbols: NLA, BAH1 | SPX (SYG1/Pho81/XPR1) domain-containing protein | chr1:635474-637083 FORWARD LENGTH=335	LOC_Os07g47590.3	protein|expressed protein	NA	NA	GO:0006817|phosphate ion transport GO:0009626|plant-type hypersensitive response GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process GO:0009751|response to salicylic acid stimulus GO:0010167|response to nitrate GO:0010337|regulation of salicylic acid metabolic process GO:0016036|cellular response to phosphate starvation GO:0042742|defense response to bacterium GO:0080021|response to benzoic acid stimulus	GO:0004842|ubiquitin-protein ligase activity GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_07112	A	A1S	Potri.002G205500	Potri.002G205500(AS)	POPTR_0002s20700	sp|Q9LZJ5|AB14C_ARATH	ABC transporter C family member 14 OS=Arabidopsis thaliana GN=ABCC14 PE=1 SV=1	AT3G62700.1	| Symbols: ATMRP10, MRP10, ABCC14 | multidrug resistance-associated protein 10 | chr3:23190428-23195727 REVERSE LENGTH=1539	LOC_Os01g25386.1	protein|multidrug resistance-associated protein, putative, expressed	IMGA|Medtr1g088680.1	ABC transporter C family protein chr1 24127529-24120971 E EGN_Mt100125 20111014	GO:0006810|transport GO:0006855|drug transmembrane transport GO:0009414|response to water deprivation GO:0009611|response to wounding GO:0009624|response to nematode GO:0009627|systemic acquired resistance GO:0034976|response to endoplasmic reticulum stress GO:0055085|transmembrane transport	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0008517|folic acid transporter activity GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0000325|plant-type vacuole GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016021|integral to membrane
pt2_07113	A	A1S	Potri.002G205600	Potri.002G205600(AS)	POPTR_0002s20710	sp|Q54QU5|WDR89_DICDI	WD repeat-containing protein 89 homolog OS=Dictyostelium discoideum GN=wdr89 PE=4 SV=1	AT2G47790.1	| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr2:19571102-19572946 REVERSE LENGTH=392	LOC_Os12g19590.1	protein|WD domain, G-beta repeat domain containing protein, expressed	NA	NA	GO:0000398|mRNA splicing, via spliceosome GO:0001510|RNA methylation GO:0008150|biological_process GO:0051604|protein maturation	GO:0000166|nucleotide binding	GO:0005634|nucleus GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_07114	A	A2S	Potri.002G205700	Potri.002G205700(AS) Potri.014G130700(DS)	POPTR_0002s20720	sp|Q43582|LSM4_TOBAC	Probable U6 snRNA-associated Sm-like protein LSm4 OS=Nicotiana tabacum PE=2 SV=1	AT5G27720.1	| Symbols: emb1644 | Small nuclear ribonucleoprotein family protein | chr5:9815904-9817304 FORWARD LENGTH=129	LOC_Os01g15310.1	protein|LSM domain containing protein, expressed	NA	NA	GO:0009793|embryo development ending in seed dormancy	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005732|small nucleolar ribonucleoprotein complex
pt2_07115	A	A1S	Potri.002G205800	Potri.002G205800(AS)	POPTR_0002s20730	sp|Q9H3S4|TPK1_HUMAN	Thiamin pyrophosphokinase 1 OS=Homo sapiens GN=TPK1 PE=1 SV=1	AT1G02880.3	| Symbols: TPK1 | thiamin pyrophosphokinase1 | chr1:643063-644485 REVERSE LENGTH=267	LOC_Os01g70580.1	protein|thiamin pyrophosphokinase 1, putative, expressed	NA	NA	GO:0006772|thiamine metabolic process GO:0009229|thiamine diphosphate biosynthetic process	GO:0004788|thiamine diphosphokinase activity GO:0005524|ATP binding	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_07116	A	A1S	Potri.002G205900	Potri.002G205900(AS)	POPTR_0002s20740	sp|F6QV99|ATAD1_BOVIN	ATPase family AAA domain-containing protein 1 OS=Bos taurus GN=ATAD1 PE=2 SV=2	AT1G02890.1	| Symbols: | AAA-type ATPase family protein | chr1:645372-651797 REVERSE LENGTH=1246	LOC_Os11g43970.1	protein|AAA-type ATPase family protein, putative, expressed	IMGA|Medtr1g088750.1	Katanin p60 ATPase-containing subunit A-like protein chr1 24184365-24173384 E EGN_Mt100125 20111014	GO:0006487|protein N-linked glycosylation GO:0009630|gravitropism	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity	GO:0009507|chloroplast
pt2_07117	A	A1S	Potri.002G206000	Potri.002G206000(AS)	POPTR_0002s20750	sp|Q9SW70|SRP_VITRI	Stress-related protein OS=Vitis riparia GN=SRP PE=2 SV=1	AT3G05500.1	| Symbols: | Rubber elongation factor protein (REF) | chr3:1593540-1594802 FORWARD LENGTH=246	LOC_Os07g47510.1	protein|stress-related protein, putative, expressed	NA	NA	GO:0006865|amino acid transport GO:0008150|biological_process GO:0010200|response to chitin	NA	GO:0005737|cytoplasm GO:0005773|vacuole
pt2_07118	A	A2S	Potri.002G206100	Potri.002G206100(AS) Potri.014G131400(DS)	POPTR_0002s20760	sp|O82245|TSPO_ARATH	Translocator protein homolog OS=Arabidopsis thaliana GN=TSPO PE=1 SV=1	AT2G47770.1	| Symbols: ATTSPO, TSPO | TSPO(outer membrane tryptophan-rich sensory protein)-related | chr2:19568701-19569291 FORWARD LENGTH=196	NA	NA	NA	NA	GO:0006778|porphyrin-containing compound metabolic process GO:0006970|response to osmotic stress GO:0009651|response to salt stress GO:0009737|response to abscisic acid stimulus	GO:0020037|heme binding	GO:0005739|mitochondrion GO:0005783|endoplasmic reticulum GO:0005794|Golgi apparatus GO:0005795|Golgi stack GO:0016020|membrane GO:0016021|integral to membrane
pt2_07119	A	A1S	Potri.002G206200	Potri.002G206200(AS)	POPTR_0002s20770	sp|P0DH90|FRIGI_ARATH	Protein FRIGIDA OS=Arabidopsis thaliana GN=FRI PE=2 SV=1	AT5G16320.1	| Symbols: FRL1 | FRIGIDA like 1 | chr5:5344507-5345919 FORWARD LENGTH=470	LOC_Os07g40270.1	protein|frigida, putative, expressed	IMGA|Medtr5g094400.1	CCP chr5 40216637-40219850 E EGN_Mt100125 20111014	NA	GO:0005515|protein binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07120	A	A1S	Potri.002G206300	Potri.002G206300(AS)	POPTR_0002s20780	NA	NA	AT1G02910.1	| Symbols: LPA1 | tetratricopeptide repeat (TPR)-containing protein | chr1:655749-658125 REVERSE LENGTH=453	LOC_Os01g25600.1	protein|tetratricopeptide repeat domain containing protein, expressed	NA	NA	GO:0010027|thylakoid membrane organization GO:0010270|photosystem II oxygen evolving complex assembly	NA	GO:0009507|chloroplast
pt2_07121	A	A1S	Potri.002G206400	Potri.002G206400(AS)	POPTR_0002s20790	sp|O82243|GH39_ARATH	Putative indole-3-acetic acid-amido synthetase GH3.9 OS=Arabidopsis thaliana GN=GH3.9 PE=2 SV=1	AT2G47750.1	| Symbols: GH3.9 | putative indole-3-acetic acid-amido synthetase GH3.9 | chr2:19560307-19562974 REVERSE LENGTH=585	LOC_Os07g47490.1	protein|OsGH3.11 - Probable indole-3-acetic acid-amido synthetase, expressed	IMGA|Medtr5g016320.1	Indole-3-acetic acid-amido synthetase GH3.3 chr5 5576809-5574506 F EGN_Mt100125 20111014	GO:0009733|response to auxin stimulus	GO:0003674|molecular_function	GO:0005737|cytoplasm GO:0009941|chloroplast envelope
pt2_07122	A	A1S	Potri.002G206600	Potri.002G206600(AS)	POPTR_0002s20800	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07123	A	A1S	Potri.002G206700	Potri.002G206700(AS)	POPTR_0002s20810	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07124	R	R	NA	NA	POPTR_0002s20820	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07125	A	A2S	Potri.T035900	Potri.T035900(AS) Potri.002G206900(DS)	POPTR_0002s20830	NA	NA	AT5G27690.1	| Symbols: | Heavy metal transport/detoxification superfamily protein | chr5:9803796-9805036 FORWARD LENGTH=352	LOC_Os05g05820.1	protein|pro-resilin precursor, putative, expressed	IMGA|Medtr1g082650.1	Heavy metal-associated domain containing protein expressed chr1 21298003-21300325 E EGN_Mt100125 20111014	GO:0030001|metal ion transport	GO:0046872|metal ion binding	GO:0005634|nucleus
pt2_07126	A	A1S	Potri.T035800	Potri.T035800(AS)	POPTR_0002s20840	sp|Q9SJG6|PP200_ARATH	Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidopsis thaliana GN=PCMP-E75 PE=2 SV=1	AT2G42920.1	| Symbols: | Pentatricopeptide repeat (PPR-like) superfamily protein | chr2:17858705-17860384 FORWARD LENGTH=559	LOC_Os01g55960.1	protein|pentatricopeptide, putative, expressed	IMGA|Medtr5g091640.1	Pentatricopeptide repeat-containing protein chr5 38923729-38922101 E EGN_Mt100125 20111014	NA	NA	GO:0009507|chloroplast
pt2_07127	A	A3S	Potri.T035700	Potri.T035700(AS) Potri.001G194800(BS) Potri.013G143400(BS)	POPTR_0002s20850	sp|A4GYV4|YCF2_POPTR	Protein ycf2 OS=Populus trichocarpa GN=ycf2-1 PE=3 SV=1	ATCG01280.1	| Symbols: YCF2.2 | Chloroplast Ycf2;ATPase, AAA type, core | chrC:145291-152175 REVERSE LENGTH=2294	NA	NA	IMGA|Medtr1g102200.1	Ycf2 chr1 30376988-30377698 H EGN_Mt100125 20111014	NA	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0017111|nucleoside-triphosphatase activity	GO:0009507|chloroplast
pt2_07128	A	A1S	Potri.T035600	Potri.T035600(AS)	POPTR_0002s20860	sp|Q9LNG5|PPP7L_ARATH	Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana GN=At1g48120 PE=2 SV=1	AT2G04865.1	| Symbols: | Aminotransferase-like, plant mobile domain family protein | chr2:1712149-1714599 FORWARD LENGTH=667	LOC_Os02g37950.3	protein|transposon protein, putative, unclassified, expressed	IMGA|Medtr5g072460.1	Ubiquitin-activating enzyme E1 chr5 29824205-29811181 E EGN_Mt100125 20111014	NA	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_07129	A	A1S	Potri.T035500	Potri.T035500(AS)	POPTR_0002s20870	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07130	A	A1S	Potri.T035400	Potri.T035400(AS)	POPTR_0002s20880	sp|P46423|GSTF_HYOMU	Glutathione S-transferase OS=Hyoscyamus muticus PE=1 SV=1	AT1G02930.2	| Symbols: GSTF6 | glutathione S-transferase 6 | chr1:661363-662191 REVERSE LENGTH=208	LOC_Os01g70770.1	protein|glutathione S-transferase, putative, expressed	IMGA|Medtr1g026140.1	Glutathione S-transferase chr1 8532077-8531225 F EGN_Mt100125 20111014	GO:0006950|response to stress GO:0006979|response to oxidative stress GO:0009407|toxin catabolic process GO:0009414|response to water deprivation GO:0009651|response to salt stress GO:0042742|defense response to bacterium GO:0046686|response to cadmium ion	GO:0004364|glutathione transferase activity GO:0005507|copper ion binding GO:0043295|glutathione binding GO:0050897|cobalt ion binding GO:2001147|camalexin binding GO:2001227|quercitrin binding	GO:0005618|cell wall GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0005773|vacuole GO:0005829|cytosol GO:0009506|plasmodesma
pt2_07131	A	A2S	Potri.T035100	Potri.T035100(AS) Potri.T035300(BS)	POPTR_0002s20890	sp|P42760|GSTF6_ARATH	Glutathione S-transferase F6 OS=Arabidopsis thaliana GN=GSTF6 PE=1 SV=2	AT1G02930.2	| Symbols: GSTF6 | glutathione S-transferase 6 | chr1:661363-662191 REVERSE LENGTH=208	LOC_Os01g27360.1	protein|glutathione S-transferase, putative, expressed	IMGA|Medtr1g026140.1	Glutathione S-transferase chr1 8532077-8531225 F EGN_Mt100125 20111014	GO:0006950|response to stress GO:0006979|response to oxidative stress GO:0009407|toxin catabolic process GO:0009414|response to water deprivation GO:0009651|response to salt stress GO:0042742|defense response to bacterium GO:0046686|response to cadmium ion	GO:0004364|glutathione transferase activity GO:0005507|copper ion binding GO:0043295|glutathione binding GO:0050897|cobalt ion binding GO:2001147|camalexin binding GO:2001227|quercitrin binding	GO:0005618|cell wall GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0005773|vacuole GO:0005829|cytosol GO:0009506|plasmodesma
pt2_07132	A	A1S	Potri.T035000	Potri.T035000(AS)	POPTR_0002s20900	sp|Q9LZI9|GSTFD_ARATH	Glutathione S-transferase F13 OS=Arabidopsis thaliana GN=GSTF13 PE=3 SV=1	AT3G62760.1	| Symbols: ATGSTF13 | Glutathione S-transferase family protein | chr3:23217425-23218246 REVERSE LENGTH=219	LOC_Os01g27260.1	protein|glutathione S-transferase, putative, expressed	IMGA|Medtr5g090920.1	Glutathione S-transferase chr5 38572154-38573974 F EGN_Mt100125 20111014	GO:0009407|toxin catabolic process	GO:0004364|glutathione transferase activity	GO:0005737|cytoplasm
pt2_07133	A	A2S	Potri.T034900	Potri.T034900(AS) Potri.014G132300(DS)	POPTR_0002s20910	sp|Q68F45|WIPI3_XENLA	WD repeat domain phosphoinositide-interacting protein 3 OS=Xenopus laevis GN=wdr45l PE=2 SV=1	AT3G62770.1	| Symbols: AtATG18a | Transducin/WD40 repeat-like superfamily protein | chr3:23218858-23221110 REVERSE LENGTH=425	LOC_Os01g70780.1	protein|WD40-like domain containing protein, putative, expressed	IMGA|Medtr1g083230.1	WD repeat domain phosphoinositide-interacting protein chr1 21551137-21554518 F EGN_Mt100125 20111014	GO:0006635|fatty acid beta-oxidation GO:0006914|autophagy GO:0010150|leaf senescence GO:0016558|protein import into peroxisome matrix GO:0042594|response to starvation GO:0044265|cellular macromolecule catabolic process GO:0048102|autophagic cell death GO:0050832|defense response to fungus	GO:0003674|molecular_function GO:0080025|phosphatidylinositol-3,5-bisphosphate binding	GO:0005634|nucleus GO:0005829|cytosol GO:0031090|organelle membrane
pt2_07134	A	A1S	Potri.T034800	Potri.T034800(AS)	POPTR_0002s20920	NA	NA	AT1G02960.2	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02965.1); Has 100 Blast hits to 99 proteins in 48 species: Archae - 0; Bacteria - 4; Metazoa - 26; Fungi - 13; Plants - 29; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). | chr1:667002-669773 REVERSE LENGTH=471	LOC_Os02g48116.1	protein|expressed protein	NA	NA	NA	NA	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07135	C	C1S	Potri.T034800	Potri.T034800(CS)	NA	NA	AT1G02960.2	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02965.1); Has 100 Blast hits to 99 proteins in 48 species: Archae - 0; Bacteria - 4; Metazoa - 26; Fungi - 13; Plants - 29; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). | chr1:667002-669773 REVERSE LENGTH=471	LOC_Os02g48116.1	protein|expressed protein	NA	NA	NA	NA	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07136	A	A1S	Potri.T034700	Potri.T034700(AS)	POPTR_0002s20940	sp|Q8L4H0|WEE1_ARATH	Wee1-like protein kinase OS=Arabidopsis thaliana GN=WEE1 PE=1 SV=1	AT1G02970.1	| Symbols: WEE1, ATWEE1 | WEE1 kinase homolog | chr1:673408-676127 FORWARD LENGTH=500	LOC_Os02g04240.1	protein|wee1-like protein kinase, putative, expressed	IMGA|Medtr5g026960.1	Serine/threonine protein kinase ICK chr5 10917762-10923315 E EGN_Mt100125 20111014	GO:0000076|DNA replication checkpoint GO:0000280|nuclear division GO:0000724|double-strand break repair via homologous recombination GO:0006260|DNA replication GO:0006261|DNA-dependent DNA replication GO:0006270|DNA replication initiation GO:0006275|regulation of DNA replication GO:0006306|DNA methylation GO:0006468|protein phosphorylation GO:0007050|cell cycle arrest GO:0008283|cell proliferation GO:0009555|pollen development GO:0010389|regulation of G2/M transition of mitotic cell cycle GO:0016444|somatic cell DNA recombination GO:0016568|chromatin modification GO:0031047|gene silencing by RNA GO:0042023|DNA endoreduplication GO:0051225|spindle assembly GO:0051567|histone H3-K9 methylation GO:0051726|regulation of cell cycle	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005515|protein binding GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus
pt2_07137	A	A1S	Potri.T034600	Potri.T034600(AS)	POPTR_0002s20950	sp|Q9ZWA6|MGP_ARATH	Zinc finger protein MAGPIE OS=Arabidopsis thaliana GN=MGP PE=1 SV=1	AT3G50700.1	| Symbols: AtIDD2, IDD2 | indeterminate(ID)-domain 2 | chr3:18840945-18842829 FORWARD LENGTH=452	LOC_Os02g31890.1	protein|ZOS2-08 - C2H2 zinc finger protein, expressed	IMGA|Medtr1g083100.1	Zinc finger protein-like protein chr1 21501009-21504901 E EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0006355|regulation of transcription, DNA-dependent GO:0006612|protein targeting to membrane GO:0009617|response to bacterium GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009965|leaf morphogenesis GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0030154|cell differentiation GO:0031348|negative regulation of defense response GO:0035304|regulation of protein dephosphorylation GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003676|nucleic acid binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_07138	G	G1	NA	NA	POPTR_0002s20960	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07139	G	G1	NA	NA	POPTR_0002s20970	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07140	A	A1S	Potri.T034500	Potri.T034500(AS)	POPTR_0002s20980	sp|Q8L725|MTPC1_ARATH	Metal tolerance protein C1 OS=Arabidopsis thaliana GN=MTPC1 PE=2 SV=1	AT2G47830.1	| Symbols: | Cation efflux family protein | chr2:19591094-19593973 REVERSE LENGTH=471	LOC_Os03g22550.1	protein|cation efflux family protein, putative, expressed	NA	NA	GO:0006812|cation transport GO:0055085|transmembrane transport	GO:0008324|cation transmembrane transporter activity GO:0015562|efflux transmembrane transporter activity	GO:0016020|membrane GO:0016021|integral to membrane
pt2_07141	A	A1S	Potri.T034400	Potri.T034400(AS)	POPTR_0002s20990	sp|Q38796|LUMI_ARATH	Homeobox protein LUMINIDEPENDENS OS=Arabidopsis thaliana GN=LD PE=1 SV=2	AT4G02560.2	| Symbols: LD | Homeodomain-like superfamily protein | chr4:1123656-1128252 REVERSE LENGTH=953	LOC_Os01g70810.1	protein|homeobox domain containing protein, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0009911|positive regulation of flower development GO:0010228|vegetative to reproductive phase transition of meristem	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_07142	A	A1S	Potri.T034200	Potri.T034200(AS)	POPTR_0002s21000	NA	NA	AT3G62900.1	| Symbols: | CW-type Zinc Finger | chr3:23248868-23254810 REVERSE LENGTH=1465	LOC_Os03g22580.1	protein|CW-type Zinc Finger, putative, expressed	IMGA|contig_51364_1.1	CW-type Zinc Finger family protein expressed contig_51364 3938-433 H PREDN 20111014	GO:0008150|biological_process	GO:0008270|zinc ion binding	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_07143	A	A2S	Potri.T034100	Potri.T034100(AS) Potri.010G179500(BS)	POPTR_0002s21010	sp|P22243|STAD_CARTI	Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Carthamus tinctorius PE=1 SV=1	AT3G02630.1	| Symbols: | Plant stearoyl-acyl-carrier-protein desaturase family protein | chr3:562164-564524 FORWARD LENGTH=396	LOC_Os04g31070.1	protein|acyl-desaturase, chloroplast precursor, putative, expressed	IMGA|Medtr5g024130.1	Stearoyl acyl carrier protein desaturase chr5 9413439-9410363 F EGN_Mt100125 20111014	GO:0006631|fatty acid metabolic process GO:0006633|fatty acid biosynthetic process GO:0007020|microtubule nucleation GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity GO:0045300|acyl-[acyl-carrier-protein] desaturase activity GO:0046914|transition metal ion binding	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_07144	A	A1S	Potri.T034000	Potri.T034000(AS)	POPTR_0002s21020	NA	NA	AT1G65470.1	| Symbols: FAS1, NFB2 | chromatin assembly factor-1 (FASCIATA1) (FAS1) | chr1:24319906-24323879 REVERSE LENGTH=815	LOC_Os01g67100.1	protein|expressed protein	NA	NA	GO:0000724|double-strand break repair via homologous recombination GO:0006261|DNA-dependent DNA replication GO:0006270|DNA replication initiation GO:0006275|regulation of DNA replication GO:0006306|DNA methylation GO:0006310|DNA recombination GO:0006325|chromatin organization GO:0006334|nucleosome assembly GO:0008283|cell proliferation GO:0009555|pollen development GO:0009934|regulation of meristem structural organization GO:0010026|trichome differentiation GO:0016444|somatic cell DNA recombination GO:0016568|chromatin modification GO:0031047|gene silencing by RNA GO:0031507|heterochromatin assembly GO:0045787|positive regulation of cell cycle GO:0048366|leaf development GO:0051726|regulation of cell cycle	GO:0042393|histone binding	GO:0005634|nucleus GO:0005678|chromatin assembly complex
pt2_07145	A	A3S	Potri.011G036000	Potri.011G036000(AS) Potri.011G034100(BS) Potri.011G036600(DS)	POPTR_0002s21030	sp|Q9ZT07|RKS1_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 OS=Arabidopsis thaliana GN=RKS1 PE=3 SV=3	AT1G11340.1	| Symbols: | S-locus lectin protein kinase family protein | chr1:3814116-3817420 REVERSE LENGTH=901	LOC_Os03g35600.1	protein|serine/threonine-protein kinase receptor precursor, putative, expressed	IMGA|Medtr5g067290.1	S-locus-specific glycoprotein S6 chr5 27445506-27446815 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0048544|recognition of pollen	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_07146	A	A18S	Potri.011G034400	Potri.011G034400(AS) Potri.011G034900(AS) Potri.011G034200(AS) Potri.011G034100(AS) Potri.T177100(AS) Potri.011G036000(AS) Potri.011G036600(BS) Potri.011G036100(BS) Potri.011G035800(BS) Potri.011G033800(BS) Potri.011G035100(BS) Potri.011G036400(BS) Potri.011G035200(BS) Potri.011G034500(BS) Potri.011G034300(BS) Potri.011G035300(DS) Potri.011G036500(DS) Potri.011G034800(DS)	POPTR_0002s21030	sp|Q9ZT07|RKS1_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 OS=Arabidopsis thaliana GN=RKS1 PE=3 SV=3	AT1G11340.1	| Symbols: | S-locus lectin protein kinase family protein | chr1:3814116-3817420 REVERSE LENGTH=901	LOC_Os03g35600.1	protein|serine/threonine-protein kinase receptor precursor, putative, expressed	IMGA|Medtr5g067250.1	Serine/threonine protein kinase chr5 27436976-27440231 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0048544|recognition of pollen	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_07147	A	A8S	Potri.011G034900	Potri.011G034900(AS) Potri.011G035900(AS) Potri.011G034300(AS) Potri.011G034400(BS) Potri.011G036500(BS) Potri.011G036100(BS) Potri.011G035100(BS) Potri.011G034200(BS)	POPTR_0002s21040	sp|Q9ZT07|RKS1_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 OS=Arabidopsis thaliana GN=RKS1 PE=3 SV=3	AT1G11340.1	| Symbols: | S-locus lectin protein kinase family protein | chr1:3814116-3817420 REVERSE LENGTH=901	LOC_Os03g35600.1	protein|serine/threonine-protein kinase receptor precursor, putative, expressed	IMGA|Medtr5g067250.1	Serine/threonine protein kinase chr5 27436976-27440231 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0048544|recognition of pollen	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_07148	A	A1S	Potri.002G212100	Potri.002G212100(AS)	POPTR_0002s21240	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07149	A	A1S	Potri.002G212200	Potri.002G212200(AS)	POPTR_0002s21260	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07150	R	R	NA	NA	POPTR_0002s21270	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07151	A	A2S	Potri.002G228900	Potri.002G228900(AS) Potri.014G153700(DS)	POPTR_0002s21280	sp|A8MRC7|B3GT2_ARATH	Probable beta-1,3-galactosyltransferase 2 OS=Arabidopsis thaliana GN=B3GALT2 PE=2 SV=1	AT1G05170.2	| Symbols: | Galactosyltransferase family protein | chr1:1491460-1493931 REVERSE LENGTH=407	LOC_Os03g38050.1	protein|galactosyltransferase, putative, expressed	IMGA|Medtr5g009700.1	Beta 1 3-glycosyltransferase-like protein I chr5 2172538-2165300 H EGN_Mt100125 20111014	GO:0006486|protein glycosylation	GO:0008378|galactosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups	GO:0005794|Golgi apparatus GO:0016020|membrane
pt2_07152	A	A1S	Potri.002G228800	Potri.002G228800(AS)	POPTR_0002s21290	sp|Q6Z1D5|ATG8C_ORYSJ	Autophagy-related protein 8C OS=Oryza sativa subsp. japonica GN=ATG8C PE=2 SV=1	AT2G05630.1	| Symbols: ATG8D | Ubiquitin-like superfamily protein | chr2:2083211-2084775 REVERSE LENGTH=120	LOC_Os08g09240.2	protein|autophagy-related protein, putative, expressed	NA	NA	GO:0006914|autophagy	GO:0008017|microtubule binding	GO:0005634|nucleus
pt2_07153	R	R	NA	NA	POPTR_0002s21295	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07154	A	A1S	Potri.002G228700	Potri.002G228700(AS)	POPTR_0002s21300	sp|A2WW87|GAM1_ORYSI	Transcription factor GAMYB OS=Oryza sativa subsp. indica GN=GAM1 PE=2 SV=1	AT2G32460.1	| Symbols: MYB101, ATMYB101, ATM1 | myb domain protein 101 | chr2:13782419-13784363 REVERSE LENGTH=490	LOC_Os01g59660.3	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr1g021230.1	MYB family transcription factor-like protein chr1 6441630-6444638 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009555|pollen development GO:0009686|gibberellin biosynthetic process GO:0009740|gibberellic acid mediated signaling pathway GO:0009789|positive regulation of abscisic acid mediated signaling pathway GO:0043068|positive regulation of programmed cell death GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_07155	A	A2S	Potri.002G228600	Potri.002G228600(AS) Potri.014G154000(DS)	POPTR_0002s21310	sp|P73714|Y1821_SYNY3	Putative zinc metalloprotease slr1821 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr1821 PE=3 SV=1	AT2G32480.1	| Symbols: ARASP | ARABIDOPSIS SERIN PROTEASE | chr2:13788679-13790022 REVERSE LENGTH=447	LOC_Os03g38230.1	protein|peptidase M50 family protein, putative, expressed	NA	NA	GO:0006508|proteolysis GO:0009658|chloroplast organization GO:0010207|photosystem II assembly	GO:0004222|metalloendopeptidase activity	GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009536|plastid GO:0009706|chloroplast inner membrane GO:0016021|integral to membrane
pt2_07156	A	A2S	Potri.002G228500	Potri.002G228500(AS) Potri.014G155200(DS)	POPTR_0002s21320	NA	NA	AT2G32520.1	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr2:13805823-13807442 REVERSE LENGTH=239	LOC_Os01g34700.1	protein|dienelactone hydrolase family protein, expressed	NA	NA	GO:0008152|metabolic process GO:0010043|response to zinc ion	GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups GO:0016787|hydrolase activity	GO:0005737|cytoplasm GO:0005829|cytosol GO:0009507|chloroplast
pt2_07157	A	A1S	Potri.002G228400	Potri.002G228400(AS)	POPTR_0002s21330	sp|Q9C519|WRKY6_ARATH	WRKY transcription factor 6 OS=Arabidopsis thaliana GN=WRKY6 PE=1 SV=1	AT1G62300.1	| Symbols: WRKY6, ATWRKY6 | WRKY family transcription factor | chr1:23016887-23019155 REVERSE LENGTH=553	LOC_Os01g14440.1	protein|WRKY1, expressed	IMGA|Medtr5g044700.1	WRKY transcription factor chr5 19196079-19199060 E EGN_Mt100125 20111014	GO:0002679|respiratory burst involved in defense response GO:0006355|regulation of transcription, DNA-dependent GO:0009407|toxin catabolic process GO:0010200|response to chitin GO:0010583|response to cyclopentenone GO:0016036|cellular response to phosphate starvation GO:0035556|intracellular signal transduction GO:0043090|amino acid import GO:0045892|negative regulation of transcription, DNA-dependent GO:0080169|cellular response to boron-containing substance deprivation	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0043565|sequence-specific DNA binding GO:0044212|transcription regulatory region DNA binding	GO:0005634|nucleus
pt2_07158	A	A1S	Potri.002G228300	Potri.002G228300(AS)	POPTR_0002s21340	sp|O04057|ASPR_CUCPE	Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1	AT1G11910.1	| Symbols: APA1, ATAPA1 | aspartic proteinase A1 | chr1:4017119-4019874 REVERSE LENGTH=506	LOC_Os05g49200.2	protein|aspartic proteinase oryzasin-1 precursor, putative, expressed	NA	NA	GO:0006096|glycolysis GO:0006508|proteolysis GO:0006623|protein targeting to vacuole GO:0006629|lipid metabolic process GO:0006833|water transport GO:0006972|hyperosmotic response GO:0007030|Golgi organization GO:0009266|response to temperature stimulus GO:0009651|response to salt stress GO:0046686|response to cadmium ion GO:0048513|organ development	GO:0004175|endopeptidase activity GO:0004190|aspartic-type endopeptidase activity	GO:0005576|extracellular region GO:0005773|vacuole GO:0005829|cytosol GO:0009506|plasmodesma
pt2_07159	A	A1S	Potri.002G228200	Potri.002G228200(AS)	POPTR_0002s21350	sp|Q54R82|MKKA_DICDI	Mitogen-activated protein kinase kinase kinase A OS=Dictyostelium discoideum GN=mkkA PE=1 SV=2	AT5G55090.1	| Symbols: MAPKKK15 | mitogen-activated protein kinase kinase kinase 15 | chr5:22356852-22358198 REVERSE LENGTH=448	LOC_Os02g21700.1	protein|STE_MEKK_ste11_MAP3K.8 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	IMGA|Medtr5g017140.1	Mitogen-activated protein kinase kinase kinase A chr5 5976237-5975296 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07160	A	A1S	Potri.002G228100	Potri.002G228100(AS)	POPTR_0002s21360	NA	NA	AT2G32500.1	| Symbols: | Stress responsive alpha-beta barrel domain protein | chr2:13795371-13797120 REVERSE LENGTH=276	LOC_Os03g02020.2	protein|stress responsive A/B Barrel domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_07161	A	A1S	Potri.002G228000	Potri.002G228000(AS)	POPTR_0002s21370	NA	NA	NA	NA	NA	NA	NA	NA	GO:0007165|signal transduction	GO:0005102|receptor binding	GO:0005739|mitochondrion GO:0048046|apoplast
pt2_07162	G	G1	NA	NA	POPTR_0002s21380	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07163	A	A1S	Potri.002G227700	Potri.002G227700(AS)	POPTR_0002s21390	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07164	R	R	NA	NA	POPTR_0002s21395	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07165	A	A2S	Potri.002G227600	Potri.002G227600(AS) Potri.014G154500(DS)	POPTR_0002s21400	sp|Q00624|ASOL_BRANA	L-ascorbate oxidase homolog OS=Brassica napus GN=Bp10 PE=2 SV=1	AT1G76160.1	| Symbols: sks5 | SKU5 similar 5 | chr1:28578211-28581020 REVERSE LENGTH=541	LOC_Os06g46500.1	protein|monocopper oxidase, putative, expressed	IMGA|Medtr5g018270.1	L-ascorbate oxidase-like protein chr5 6538701-6543083 F EGN_Mt100125 20111014	GO:0016126|sterol biosynthetic process GO:0052541|plant-type cell wall cellulose metabolic process GO:0052546|cell wall pectin metabolic process GO:0055114|oxidation-reduction process	GO:0005507|copper ion binding GO:0016491|oxidoreductase activity	GO:0005576|extracellular region GO:0005618|cell wall GO:0009505|plant-type cell wall GO:0009506|plasmodesma GO:0048046|apoplast
pt2_07166	A	A1S	Potri.002G227500	Potri.002G227500(AS)	POPTR_0002s21410	sp|Q5VR89|SIP11_ORYSJ	Aquaporin SIP1-1 OS=Oryza sativa subsp. japonica GN=SIP1-1 PE=2 SV=2	AT5G18290.2	| Symbols: SIP1;2 | Aquaporin-like superfamily protein | chr5:6055198-6056407 REVERSE LENGTH=243	LOC_Os01g08660.1	protein|aquaporin protein, putative, expressed	NA	NA	GO:0006810|transport GO:0046685|response to arsenic-containing substance	GO:0005215|transporter activity GO:0015250|water channel activity	GO:0005783|endoplasmic reticulum GO:0016020|membrane
pt2_07167	A	A1S	Potri.002G227300	Potri.002G227300(AS)	POPTR_0002s21420	sp|Q339N5|CSLH1_ORYSJ	Cellulose synthase-like protein H1 OS=Oryza sativa subsp. japonica GN=CSLH1 PE=2 SV=2	AT2G32540.1	| Symbols: ATCSLB04, CSLB04, ATCSLB4 | cellulose synthase-like B4 | chr2:13814686-13818289 FORWARD LENGTH=755	LOC_Os10g20090.1	protein|CSLH1 - cellulose synthase-like family H, expressed	IMGA|Medtr5g029190.1	Cellulose synthase-like protein chr5 11949044-11944517 E EGN_Mt100125 20111014	GO:0000271|polysaccharide biosynthetic process GO:0030244|cellulose biosynthetic process	GO:0016740|transferase activity GO:0016757|transferase activity, transferring glycosyl groups GO:0016759|cellulose synthase activity GO:0016760|cellulose synthase (UDP-forming) activity	GO:0005794|Golgi apparatus GO:0016020|membrane
pt2_07168	A	A1S	Potri.002G227200	Potri.002G227200(AS)	POPTR_0002s21440	NA	NA	AT1G05090.1	| Symbols: | dentin sialophosphoprotein-related | chr1:1463202-1465622 FORWARD LENGTH=706	LOC_Os08g34760.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07169	A	A2S	Potri.002G227100	Potri.002G227100(AS) Potri.014G155600(DS)	POPTR_0002s21450	NA	NA	AT2G32580.1	| Symbols: | Protein of unknown function (DUF1068) | chr2:13827849-13829135 FORWARD LENGTH=183	LOC_Os03g56610.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005794|Golgi apparatus
pt2_07170	A	A1S	Potri.002G227000	Potri.002G227000(AS)	POPTR_0002s21460	NA	NA	AT1G11940.1	| Symbols: | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein | chr1:4031768-4033946 REVERSE LENGTH=383	LOC_Os01g50040.1	protein|DNA binding protein, putative, expressed	IMGA|Medtr5g006920.1	hypothetical protein chr5 898735-900842 H EGN_Mt100125 20111014	NA	GO:0016757|transferase activity, transferring glycosyl groups	GO:0005739|mitochondrion GO:0005794|Golgi apparatus GO:0016020|membrane
pt2_07171	A	A1S	Potri.002G226900	Potri.002G226900(AS)	POPTR_0002s21470	sp|O32107|YUID_BACSU	Uncharacterized membrane protein yuiD OS=Bacillus subtilis (strain 168) GN=yuiD PE=4 SV=1	AT3G21610.1	| Symbols: | Acid phosphatase/vanadium-dependent haloperoxidase-related protein | chr3:7609377-7610601 REVERSE LENGTH=174	LOC_Os04g40980.1	protein|Divergent PAP2 family domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_07172	A	A2S	Potri.002G226800	Potri.002G226800(AS) Potri.014G156100(DS)	POPTR_0002s21480	sp|Q09809|YAB9_SCHPO	Uncharacterized membrane protein C2G11.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC2G11.09 PE=2 SV=2	AT3G21620.1	| Symbols: | ERD (early-responsive to dehydration stress) family protein | chr3:7611044-7614041 REVERSE LENGTH=756	LOC_Os01g35050.3	protein|early-responsive to dehydration protein-related, putative, expressed	IMGA|Medtr5g086610.1	Transmembrane protein chr5 36406656-36411875 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005886|plasma membrane GO:0016020|membrane
pt2_07173	D	D1S	Potri.002G226700	Potri.002G226700(DS)	POPTR_0002s21485	sp|Q69KJ0|RTL3_ORYSJ	Ribonuclease 3-like protein 3 OS=Oryza sativa subsp. japonica GN=Os06g0358800 PE=2 SV=1	AT4G15417.1	| Symbols: ATRTL1, RTL1 | RNAse II-like 1 | chr4:8821759-8822991 FORWARD LENGTH=264	LOC_Os06g25250.1	protein|endoribonuclease Dicer, putative, expressed	IMGA|contig_179117_37.1	Endoribonuclease Dicer contig_179117 314-36 H PREDN 20111014	GO:0006396|RNA processing	GO:0003723|RNA binding GO:0004525|ribonuclease III activity	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_07174	A	A1S	Potri.002G226700	Potri.002G226700(AS)	POPTR_0002s21490	sp|Q69KJ0|RTL3_ORYSJ	Ribonuclease 3-like protein 3 OS=Oryza sativa subsp. japonica GN=Os06g0358800 PE=2 SV=1	AT4G15417.1	| Symbols: ATRTL1, RTL1 | RNAse II-like 1 | chr4:8821759-8822991 FORWARD LENGTH=264	LOC_Os06g25250.1	protein|endoribonuclease Dicer, putative, expressed	IMGA|contig_179117_37.1	Endoribonuclease Dicer contig_179117 314-36 H PREDN 20111014	GO:0006396|RNA processing	GO:0003723|RNA binding GO:0004525|ribonuclease III activity	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_07175	A	A1S	Potri.002G226600	Potri.002G226600(AS)	POPTR_0002s21510	sp|Q9LV48|PERK1_ARATH	Proline-rich receptor-like protein kinase PERK1 OS=Arabidopsis thaliana GN=PERK1 PE=1 SV=1	AT3G21630.1	| Symbols: CERK1, LYSM RLK1 | chitin elicitor receptor kinase 1 | chr3:7615543-7618530 REVERSE LENGTH=617	LOC_Os08g42580.1	protein|protein kinase domain containing protein, expressed	IMGA|Medtr5g086130.1	LysM receptor kinase chr5 36224932-36229163 E EGN_Mt100125 20111014	GO:0002679|respiratory burst involved in defense response GO:0006468|protein phosphorylation GO:0006612|protein targeting to membrane GO:0006944|cellular membrane fusion GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process GO:0009817|defense response to fungus, incompatible interaction GO:0010200|response to chitin GO:0010363|regulation of plant-type hypersensitive response GO:0030968|endoplasmic reticulum unfolded protein response GO:0031347|regulation of defense response GO:0032491|detection of molecule of fungal origin GO:0032499|detection of peptidoglycan GO:0035556|intracellular signal transduction GO:0043069|negative regulation of programmed cell death GO:0045087|innate immune response	GO:0008061|chitin binding GO:0016301|kinase activity GO:0019199|transmembrane receptor protein kinase activity	GO:0005576|extracellular region GO:0005886|plasma membrane
pt2_07176	A	A2S	Potri.002G226500	Potri.002G226500(AS) Potri.004G111400(BS)	POPTR_0002s21520	NA	NA	AT3G30390.2	| Symbols: | Transmembrane amino acid transporter family protein | chr3:11977112-11978827 REVERSE LENGTH=460	LOC_Os02g09810.1	protein|amino acid transporter, putative, expressed	NA	NA	GO:0006865|amino acid transport	GO:0015171|amino acid transmembrane transporter activity	GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005886|plasma membrane GO:0016020|membrane
pt2_07177	A	A1S	Potri.002G226300	Potri.002G226300(AS)	POPTR_0002s21530	NA	NA	NA	NA	NA	NA	NA	NA	GO:0007165|signal transduction	GO:0005102|receptor binding	GO:0005739|mitochondrion GO:0048046|apoplast
pt2_07178	G	G1	NA	NA	POPTR_0002s21535	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07179	A	A1S	Potri.002G226200	Potri.002G226200(AS)	POPTR_0002s21550	sp|Q8RW96|2A5G_ARATH	Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform OS=Arabidopsis thaliana GN=B'GAMMA PE=1 SV=2	AT4G15415.1	| Symbols: ATB' GAMMA | Protein phosphatase 2A regulatory B subunit family protein | chr4:8817707-8819349 FORWARD LENGTH=522	LOC_Os03g62730.1	protein|transposon protein, putative, unclassified, expressed	IMGA|Medtr1g011460.1	Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform chr1 2355347-2358219 E EGN_Mt100125 20111014	GO:0006555|methionine metabolic process GO:0007165|signal transduction GO:0010090|trichome morphogenesis GO:0031348|negative regulation of defense response GO:0090342|regulation of cell aging	GO:0008266|poly(U) RNA binding GO:0008601|protein phosphatase type 2A regulator activity	GO:0000159|protein phosphatase type 2A complex GO:0005634|nucleus
pt2_07180	B	B1S	Potri.002G226100	Potri.002G226100(BS)	POPTR_0002s21560	sp|Q9C5L3|GLPT1_ARATH	Putative glycerol-3-phosphate transporter 1 OS=Arabidopsis thaliana GN=At3g47420 PE=2 SV=1	AT3G47420.1	| Symbols: ATPS3, PS3 | phosphate starvation-induced gene 3 | chr3:17472541-17474209 REVERSE LENGTH=523	LOC_Os04g46880.2	protein|transporter, major facilitator family, putative, expressed	NA	NA	GO:0008643|carbohydrate transport GO:0055062|phosphate ion homeostasis GO:0055085|transmembrane transport	GO:0005351|sugar:hydrogen symporter activity	GO:0016021|integral to membrane
pt2_07181	C	C1S	Potri.002G226000	Potri.002G226000(CS)	sp|Q9P281|BAHC1_HUMAN	BAH and coiled-coil domain-containing protein 1 OS=Homo sapiens GN=BAHCC1 PE=1 SV=3	AT4G22140.2	| Symbols: EBS | PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein | chr4:11728093-11730230 REVERSE LENGTH=224	LOC_Os09g21770.1	protein|ES43 protein, putative, expressed	IMGA|contig_167695_1.1	BAH-PHD domain-containing protein contig_167695 4289-95 E PREDN 20111014	GO:0006333|chromatin assembly or disassembly GO:0006355|regulation of transcription, DNA-dependent GO:0009845|seed germination GO:0009911|positive regulation of flower development	GO:0003677|DNA binding GO:0008270|zinc ion binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07182	G	G7	NA	NA	POPTR_0002s21580	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07183	B	B2S	Potri.008G189300	Potri.008G189300(BS) Potri.014G056100(DS)	POPTR_0002s21590	NA	NA	AT5G05800.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 881 Blast hits to 512 proteins in 30 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 38; Plants - 833; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). | chr5:1743234-1744751 REVERSE LENGTH=449	LOC_Os12g10550.1	protein|transposon protein, putative, CACTA, En/Spm sub-class, expressed	IMGA|Medtr5g054570.1	PIF-like protein chr5 21936286-21937344 H EGN_Mt100125 20111014	GO:0008150|biological_process GO:0048573|photoperiodism, flowering	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_07184	A	A1S	Potri.002G225800	Potri.002G225800(AS)	POPTR_0002s21600	sp|Q7Y175|UBAX1_ARATH	UBA and UBX domain-containing protein At4g15410 OS=Arabidopsis thaliana GN=At4g15410 PE=2 SV=1	AT4G15410.1	| Symbols: PUX5 | serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime gamma | chr4:8814868-8816596 FORWARD LENGTH=421	LOC_Os04g39040.1	protein|UBA and UBX domain-containing protein, putative, expressed	IMGA|Medtr5g085870.1	UBA and UBX domain-containing protein chr5 36102286-36098170 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0005515|protein binding	GO:0005634|nucleus
pt2_07185	A	A1S	Potri.002G225700	Potri.002G225700(AS)	POPTR_0002s21610	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005634|nucleus
pt2_07186	B	B2S	Potri.002G225600	Potri.002G225600(BS) Potri.002G225500(BA)	POPTR_0002s21620	NA	NA	AT5G55140.1	| Symbols: | ribosomal protein L30 family protein | chr5:22381370-22381787 FORWARD LENGTH=109	LOC_Os08g01859.1	protein|ribosomal protein L30 containing protein, expressed	NA	NA	GO:0006354|DNA-dependent transcription, elongation GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005840|ribosome GO:0015934|large ribosomal subunit
pt2_07187	A	A2S	Potri.002G225500	Potri.002G225500(AS) Potri.002G225600(AA)	POPTR_0002s21630	sp|Q9LVE0|PTR33_ARATH	Nitrate transporter 1.3 OS=Arabidopsis thaliana GN=NRT1.3 PE=1 SV=1	AT3G21670.1	| Symbols: | Major facilitator superfamily protein | chr3:7626942-7628954 REVERSE LENGTH=590	LOC_Os04g39030.1	protein|peptide transporter PTR2, putative, expressed	IMGA|Medtr5g085850.1	Nitrate transporter chr5 36075134-36078493 F EGN_Mt100125 20111014	GO:0006857|oligopeptide transport	GO:0005215|transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_07188	A	A2S	Potri.002G225400	Potri.002G225400(AS) Potri.014G157600(DS)	POPTR_0002s21640	sp|O48766|GUN11_ARATH	Endoglucanase 11 OS=Arabidopsis thaliana GN=At2g32990 PE=2 SV=1	AT2G32990.1	| Symbols: AtGH9B8, GH9B8 | glycosyl hydrolase 9B8 | chr2:14003361-14005844 FORWARD LENGTH=525	LOC_Os02g50490.1	protein|endoglucanase, putative, expressed	IMGA|Medtr5g085730.1	Endoglucanase chr5 36028973-36032829 E EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0005576|extracellular region
pt2_07189	B	B1S	Potri.002G225300	Potri.002G225300(BS)	POPTR_0002s21645	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07190	A	A1S	Potri.002G225200	Potri.002G225200(AS)	POPTR_0002s21650	sp|O48766|GUN11_ARATH	Endoglucanase 11 OS=Arabidopsis thaliana GN=At2g32990 PE=2 SV=1	AT2G32990.1	| Symbols: AtGH9B8, GH9B8 | glycosyl hydrolase 9B8 | chr2:14003361-14005844 FORWARD LENGTH=525	LOC_Os02g50490.1	protein|endoglucanase, putative, expressed	IMGA|Medtr5g085730.1	Endoglucanase chr5 36028973-36032829 E EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0005576|extracellular region
pt2_07191	A	A2S	Potri.002G225100	Potri.002G225100(AS) Potri.002G225000(BS)	POPTR_0002s21660	NA	NA	AT2G32980.1	| Symbols: | unknown protein; Has 158 Blast hits to 154 proteins in 73 species: Archae - 0; Bacteria - 61; Metazoa - 0; Fungi - 0; Plants - 55; Viruses - 28; Other Eukaryotes - 14 (source: NCBI BLink). | chr2:13997569-13999715 REVERSE LENGTH=296	LOC_Os08g10410.1	protein|expressed protein	NA	NA	GO:0007020|microtubule nucleation GO:0007067|mitosis	GO:0005515|protein binding	GO:0005634|nucleus
pt2_07192	C	C1S	Potri.002G224900	Potri.002G224900(CS)	NA	NA	AT2G32970.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages. | chr2:13991744-13995065 REVERSE LENGTH=690	LOC_Os02g53210.4	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_07193	A	A3S	Potri.002G224800	Potri.002G224800(AS) Potri.014G158300(BS) Potri.002G224700(DS)	POPTR_0002s21680	sp|Q9FLP6|SUMO2_ARATH	Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana GN=SUMO2 PE=1 SV=1	AT5G55160.1	| Symbols: SUM2, SUMO 2, SUMO2, ATSUMO2 | small ubiquitin-like modifier 2 | chr5:22383747-22384772 REVERSE LENGTH=103	LOC_Os01g68950.1	protein|ubiquitin family domain containing protein, expressed	NA	NA	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0006094|gluconeogenesis GO:0007010|cytoskeleton organization GO:0009086|methionine biosynthetic process GO:0009408|response to heat GO:0010498|proteasomal protein catabolic process GO:0016925|protein sumoylation	GO:0031386|protein tag	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_07194	A	A2S	Potri.002G224700	Potri.002G224700(AS) Potri.002G224800(BS)	POPTR_0002s21690	sp|P55852|SUMO1_ARATH	Small ubiquitin-related modifier 1 OS=Arabidopsis thaliana GN=SUMO1 PE=1 SV=2	AT4G26840.1	| Symbols: SUM1, SUMO 1, SUMO1, ATSUMO1 | small ubiquitin-like modifier 1 | chr4:13497466-13498458 FORWARD LENGTH=100	LOC_Os01g68950.1	protein|ubiquitin family domain containing protein, expressed	NA	NA	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0006094|gluconeogenesis GO:0007010|cytoskeleton organization GO:0009086|methionine biosynthetic process GO:0009408|response to heat GO:0010498|proteasomal protein catabolic process GO:0016925|protein sumoylation	GO:0031386|protein tag	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_07195	A	A1S	Potri.002G224600	Potri.002G224600(AS)	POPTR_0002s21700	sp|Q9FJU9|E1313_ARATH	Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana GN=At5g56590 PE=1 SV=1	AT2G05790.1	| Symbols: | O-Glycosyl hydrolases family 17 protein | chr2:2199450-2201293 FORWARD LENGTH=472	LOC_Os02g53200.2	protein|glucan endo-1,3-beta-glucosidase precursor, putative, expressed	IMGA|Medtr5g085580.1	"Glucan endo-1,3-beta-glucosidase" chr5 35975309-35973056 F EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0007389|pattern specification process GO:0008361|regulation of cell size GO:0009926|auxin polar transport GO:0010015|root morphogenesis GO:0010075|regulation of meristem growth GO:0040007|growth	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0043169|cation binding	GO:0005886|plasma membrane
pt2_07196	B	B1S	Potri.002G224500	Potri.002G224500(BS)	POPTR_0002s21710	sp|Q9ZVN6|AP180_ARATH	Clathrin coat assembly protein AP180 OS=Arabidopsis thaliana GN=AP180 PE=1 SV=1	AT1G05020.1	| Symbols: | ENTH/ANTH/VHS superfamily protein | chr1:1435384-1437345 REVERSE LENGTH=653	LOC_Os03g16800.2	protein|clathrin assembly protein, putative, expressed	IMGA|contig_67768_1.1	Unknown protein contig_67768 2137-201 E PREDN 20111014	GO:0048268|clathrin coat assembly	GO:0005515|protein binding GO:0005543|phospholipid binding GO:0005545|1-phosphatidylinositol binding GO:0030276|clathrin binding	GO:0005634|nucleus GO:0030118|clathrin coat
pt2_07197	A	A1S	Potri.002G224500	Potri.002G224500(AS)	POPTR_0002s21710	sp|Q9ZVN6|AP180_ARATH	Clathrin coat assembly protein AP180 OS=Arabidopsis thaliana GN=AP180 PE=1 SV=1	AT1G05020.1	| Symbols: | ENTH/ANTH/VHS superfamily protein | chr1:1435384-1437345 REVERSE LENGTH=653	LOC_Os03g16800.2	protein|clathrin assembly protein, putative, expressed	IMGA|contig_67768_1.1	Unknown protein contig_67768 2137-201 E PREDN 20111014	GO:0048268|clathrin coat assembly	GO:0005515|protein binding GO:0005543|phospholipid binding GO:0005545|1-phosphatidylinositol binding GO:0030276|clathrin binding	GO:0005634|nucleus GO:0030118|clathrin coat
pt2_07198	A	A1S	Potri.002G224500	Potri.002G224500(AS)	POPTR_0002s21710	sp|Q9ZVN6|AP180_ARATH	Clathrin coat assembly protein AP180 OS=Arabidopsis thaliana GN=AP180 PE=1 SV=1	AT1G05020.1	| Symbols: | ENTH/ANTH/VHS superfamily protein | chr1:1435384-1437345 REVERSE LENGTH=653	LOC_Os03g16800.2	protein|clathrin assembly protein, putative, expressed	IMGA|contig_67768_1.1	Unknown protein contig_67768 2137-201 E PREDN 20111014	GO:0048268|clathrin coat assembly	GO:0005515|protein binding GO:0005543|phospholipid binding GO:0005545|1-phosphatidylinositol binding GO:0030276|clathrin binding	GO:0005634|nucleus GO:0030118|clathrin coat
pt2_07199	A	A1S	Potri.002G224400	Potri.002G224400(AS)	POPTR_0002s21720	NA	NA	AT2G05810.2	| Symbols: | ARM repeat superfamily protein | chr2:2215225-2216967 REVERSE LENGTH=580	LOC_Os09g05030.1	protein|armadillo/beta-catenin-like repeat family protein, expressed	NA	NA	NA	NA	GO:0005575|cellular_component
pt2_07200	A	A1S	Potri.002G224300	Potri.002G224300(AS)	POPTR_0002s21730	NA	NA	AT2G31340.1	| Symbols: emb1381 | embryo defective 1381 | chr2:13361614-13364633 FORWARD LENGTH=559	LOC_Os09g12500.2	protein|EMB1381, putative, expressed	NA	NA	GO:0009793|embryo development ending in seed dormancy	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_07201	A	A1S	Potri.002G224200	Potri.002G224200(AS)	POPTR_0002s21740	NA	NA	AT4G03965.1	| Symbols: | RING/U-box superfamily protein | chr4:1889576-1890205 FORWARD LENGTH=209	LOC_Os01g68900.1	protein|zinc finger, C3HC4 type family protein, expressed	NA	NA	GO:0008150|biological_process	GO:0008270|zinc ion binding	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_07202	A	A2S	Potri.002G224100	Potri.002G224100(AS) Potri.014G159000(DS)	POPTR_0002s21750	sp|Q08506|ACCO1_PETHY	1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1	AT1G05010.1	| Symbols: EFE, ACO4, EAT1 | ethylene-forming enzyme | chr1:1431419-1432695 REVERSE LENGTH=323	LOC_Os09g27820.1	protein|1-aminocyclopropane-1-carboxylate oxidase protein, putative, expressed	IMGA|Medtr5g085330.2	1-aminocyclopropane-1-carboxylate oxidase chr5 35861279-35859475 F EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0002831|regulation of response to biotic stimulus GO:0006612|protein targeting to membrane GO:0009595|detection of biotic stimulus GO:0009620|response to fungus GO:0009693|ethylene biosynthetic process GO:0009697|salicylic acid biosynthetic process GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0030003|cellular cation homeostasis GO:0031348|negative regulation of defense response GO:0042742|defense response to bacterium GO:0043900|regulation of multi-organism process GO:0050832|defense response to fungus GO:0055114|oxidation-reduction process GO:0070838|divalent metal ion transport GO:0071398|cellular response to fatty acid	GO:0009815|1-aminocyclopropane-1-carboxylate oxidase activity GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	GO:0005737|cytoplasm
pt2_07203	B	B1S	Potri.002G224000	Potri.002G224000(BS)	POPTR_0002s21760	sp|Q9ZVN4|Y1500_ARATH	Probable tyrosine-protein phosphatase At1g05000 OS=Arabidopsis thaliana GN=At1g05000 PE=1 SV=1	AT1G05000.1	| Symbols: | Phosphotyrosine protein phosphatases superfamily protein | chr1:1425660-1428393 FORWARD LENGTH=215	LOC_Os09g05020.2	protein|tyrosine phosphatase family protein, putative, expressed	IMGA|Medtr5g085300.1	Tyrosine specific protein phosphatase family protein chr5 35826021-35829445 F EGN_Mt100125 20111014	GO:0007243|intracellular protein kinase cascade GO:0016311|dephosphorylation GO:0043407|negative regulation of MAP kinase activity	GO:0004721|phosphoprotein phosphatase activity GO:0004725|protein tyrosine phosphatase activity GO:0016791|phosphatase activity	GO:0005737|cytoplasm
pt2_07204	A	A1S	Potri.002G223900	Potri.002G223900(AS)	POPTR_0002s21780	NA	NA	NA	NA	LOC_Os02g10270.1	protein|retrotransposon protein, putative, unclassified, expressed	IMGA|Medtr1g006360.1	Zinc knuckle family protein chr1 502592-503209 H EGN_Mt100125 20111014	NA	NA	NA
pt2_07205	A	A1S	Potri.002G223700	Potri.002G223700(AS)	POPTR_0002s21790	sp|Q94AD9|C3H3_ARATH	Zinc finger CCCH domain-containing protein 3 OS=Arabidopsis thaliana GN=At1g04990 PE=2 SV=1	AT1G04990.1	| Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family protein | chr1:1419368-1421454 REVERSE LENGTH=404	LOC_Os11g28270.1	protein|zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	IMGA|Medtr5g085200.1	Zinc finger CCCH domain-containing protein chr5 35765509-35760273 F EGN_Mt100125 20111014	GO:0007623|circadian rhythm GO:0008150|biological_process	GO:0003676|nucleic acid binding GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_07206	A	A1S	Potri.002G223600	Potri.002G223600(AS)	POPTR_0002s21800	sp|O48626|ZW10_ARATH	Centromere/kinetochore protein zw10 homolog OS=Arabidopsis thaliana GN=ZW10 PE=2 SV=1	AT2G32900.1	| Symbols: ATZW10 | centromere/kinetochore protein, putative (ZW10) | chr2:13953807-13957470 FORWARD LENGTH=742	LOC_Os11g34310.1	protein|centromere/kinetochore protein zw10, putative, expressed	IMGA|Medtr5g084830.1	Centromere/kinetochore protein zw10-like protein chr5 35599040-35607092 F EGN_Mt100125 20111014	GO:0007067|mitosis	NA	GO:0000775|chromosome, centromeric region GO:0005634|nucleus
pt2_07207	A	A1S	Potri.002G223500	Potri.002G223500(AS)	POPTR_0002s21810	NA	NA	NA	NA	LOC_Os10g16870.1	protein|zinc knuckle family protein, expressed	NA	NA	NA	NA	NA
pt2_07208	A	A1S	Potri.002G219700	Potri.002G219700(AS)	POPTR_0002s21820	sp|Q67ZI9|GDL48_ARATH	GDSL esterase/lipase At2g42990 OS=Arabidopsis thaliana GN=At2g42990 PE=2 SV=1	AT2G42990.1	| Symbols: | GDSL-like Lipase/Acylhydrolase superfamily protein | chr2:17879056-17880200 FORWARD LENGTH=350	LOC_Os09g04710.1	protein|GDSL-like lipase/acylhydrolase, putative, expressed	IMGA|Medtr5g084750.1	GDSL esterase/lipase chr5 35552357-35561949 E EGN_Mt100125 20111014	GO:0006629|lipid metabolic process	GO:0004091|carboxylesterase activity GO:0016788|hydrolase activity, acting on ester bonds	GO:0005576|extracellular region
pt2_07209	A	A8S	Potri.002G219600	Potri.002G219600(AS) Potri.001G223900(BS) Potri.001G222800(BS) Potri.001G223500(BS) Potri.001G223700(BS) Potri.001G224000(BS) Potri.001G223800(BS) Potri.001G223600(BS)	POPTR_0002s21830	sp|Q7XKV4|BGL12_ORYSJ	Beta-glucosidase 12 OS=Oryza sativa subsp. japonica GN=BGLU12 PE=2 SV=2	AT3G60120.1	| Symbols: BGLU27 | beta glucosidase 27 | chr3:22206238-22208952 FORWARD LENGTH=540	LOC_Os04g39880.1	protein|Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed	IMGA|Medtr5g071520.1	Beta-glucosidase D7 chr5 29396807-29401668 H EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0043169|cation binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07210	A	A4S	Potri.002G219600	Potri.002G219600(AS) Potri.001G223700(AS) Potri.001G223600(AS) Potri.001G223900(BS)	POPTR_0002s21830	sp|Q7XKV4|BGL12_ORYSJ	Beta-glucosidase 12 OS=Oryza sativa subsp. japonica GN=BGLU12 PE=2 SV=2	AT3G60120.1	| Symbols: BGLU27 | beta glucosidase 27 | chr3:22206238-22208952 FORWARD LENGTH=540	LOC_Os04g39880.1	protein|Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed	IMGA|Medtr5g071520.1	Beta-glucosidase D7 chr5 29396807-29401668 H EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0043169|cation binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07211	A	A1S	Potri.002G219500	Potri.002G219500(AS)	POPTR_0002s21840	sp|Q8L3X9|KASM_ARATH	3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Arabidopsis thaliana GN=KAS PE=1 SV=1	AT2G04540.1	| Symbols: | Beta-ketoacyl synthase | chr2:1581521-1584635 REVERSE LENGTH=461	LOC_Os02g10320.1	protein|3-oxoacyl-synthase, putative, expressed	NA	NA	GO:0000038|very long-chain fatty acid metabolic process GO:0006633|fatty acid biosynthetic process GO:0008152|metabolic process GO:0009058|biosynthetic process GO:0009409|response to cold GO:0042335|cuticle development	GO:0003824|catalytic activity GO:0004312|fatty acid synthase activity GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0005739|mitochondrion
pt2_07212	C	C1S	Potri.002G219300	Potri.002G219300(CS)	NA	NA	AT1G04960.1	| Symbols: | Protein of unknown function (DUF1664) | chr1:1408021-1410673 REVERSE LENGTH=317	LOC_Os09g30478.1	protein|expressed protein	IMGA|Medtr5g038550.1	BZIP transcription factor chr5 16513066-16506175 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_07213	A	A1S	Potri.002G219300	Potri.002G219300(AS)	POPTR_0002s21860	NA	NA	AT1G04960.1	| Symbols: | Protein of unknown function (DUF1664) | chr1:1408021-1410673 REVERSE LENGTH=317	LOC_Os09g30478.1	protein|expressed protein	IMGA|Medtr5g038550.1	BZIP transcription factor chr5 16513066-16506175 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_07214	A	A1S	Potri.002G219300	Potri.002G219300(AS)	POPTR_0002s21860	NA	NA	AT1G04960.1	| Symbols: | Protein of unknown function (DUF1664) | chr1:1408021-1410673 REVERSE LENGTH=317	LOC_Os09g30478.1	protein|expressed protein	IMGA|Medtr5g038550.1	BZIP transcription factor chr5 16513066-16506175 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_07215	A	A1S	Potri.002G219300	Potri.002G219300(AS)	POPTR_0002s21860	NA	NA	AT1G04960.1	| Symbols: | Protein of unknown function (DUF1664) | chr1:1408021-1410673 REVERSE LENGTH=317	LOC_Os09g30478.1	protein|expressed protein	IMGA|Medtr5g038550.1	BZIP transcription factor chr5 16513066-16506175 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_07216	A	A2S	Potri.002G219200	Potri.002G219200(AS) Potri.014G160900(DS)	POPTR_0002s21870	sp|P56331|IF1A_ONOVI	Eukaryotic translation initiation factor 1A OS=Onobrychis viciifolia PE=2 SV=2	AT2G04520.1	| Symbols: | Nucleic acid-binding, OB-fold-like protein | chr2:1574802-1575239 REVERSE LENGTH=145	LOC_Os02g19770.1	protein|eukaryotic translation initiation factor 1A, putative, expressed	NA	NA	GO:0006413|translational initiation	GO:0003723|RNA binding GO:0003743|translation initiation factor activity	GO:0005634|nucleus GO:0005829|cytosol
pt2_07217	A	A1S	Potri.002G219100	Potri.002G219100(AS)	POPTR_0002s21880	NA	NA	NA	NA	NA	NA	NA	NA	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0006352|DNA-dependent transcription, initiation GO:0006366|transcription from RNA polymerase II promoter GO:0009860|pollen tube growth GO:0010048|vernalization response GO:0048573|photoperiodism, flowering GO:0051090|regulation of sequence-specific DNA binding transcription factor activity	GO:0003677|DNA binding	GO:0005634|nucleus
pt2_07218	A	A5S	Potri.002G219000	Potri.002G219000(AS) Potri.002G218800(AS) Potri.002G218700(AS) Potri.002G218500(BS) Potri.002G218300(BS)	POPTR_0002s21890	NA	NA	AT2G44310.1	| Symbols: | Calcium-binding EF-hand family protein | chr2:18309285-18309713 FORWARD LENGTH=142	LOC_Os09g31040.1	protein|EF hand family protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0005509|calcium ion binding	GO:0005634|nucleus GO:0005829|cytosol
pt2_07219	A	A1S	Potri.002G218900	Potri.002G218900(AS)	POPTR_0002s21900	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008152|metabolic process GO:0009611|response to wounding GO:0046686|response to cadmium ion GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0048037|cofactor binding GO:0051287|NAD binding	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009579|thylakoid
pt2_07220	B	B1S	Potri.002G218600	Potri.002G218600(BS)	POPTR_0002s21930	sp|Q07511|FDH_SOLTU	Formate dehydrogenase, mitochondrial OS=Solanum tuberosum GN=FDH1 PE=1 SV=2	AT5G14780.1	| Symbols: FDH | formate dehydrogenase | chr5:4777043-4779190 FORWARD LENGTH=384	LOC_Os06g29180.1	protein|erythronate-4-phosphate dehydrogenase domain containing protein, expressed	NA	NA	GO:0008152|metabolic process GO:0009611|response to wounding GO:0046686|response to cadmium ion GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0048037|cofactor binding GO:0051287|NAD binding	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009579|thylakoid
pt2_07221	A	A5S	Potri.002G218500	Potri.002G218500(AS) Potri.002G219000(BS) Potri.002G218300(BS) Potri.002G218800(BS) Potri.002G218700(BS)	POPTR_0002s21940	NA	NA	AT2G44310.1	| Symbols: | Calcium-binding EF-hand family protein | chr2:18309285-18309713 FORWARD LENGTH=142	LOC_Os09g31040.1	protein|EF hand family protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0005509|calcium ion binding	GO:0005634|nucleus GO:0005829|cytosol
pt2_07222	A	A2S	Potri.002G218400	Potri.002G218400(AS) Potri.002G218600(DS)	POPTR_0002s21950	sp|Q07511|FDH_SOLTU	Formate dehydrogenase, mitochondrial OS=Solanum tuberosum GN=FDH1 PE=1 SV=2	AT5G14780.1	| Symbols: FDH | formate dehydrogenase | chr5:4777043-4779190 FORWARD LENGTH=384	LOC_Os06g29180.1	protein|erythronate-4-phosphate dehydrogenase domain containing protein, expressed	NA	NA	GO:0008152|metabolic process GO:0009611|response to wounding GO:0046686|response to cadmium ion GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0048037|cofactor binding GO:0051287|NAD binding	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009579|thylakoid
pt2_07223	D	D6S	Potri.002G219000	Potri.002G219000(DS) Potri.002G218500(DS) Potri.002G218300(DS) Potri.002G218800(DS) Potri.014G161200(DS) Potri.002G218700(DS)	POPTR_0002s21960	NA	NA	AT2G44310.1	| Symbols: | Calcium-binding EF-hand family protein | chr2:18309285-18309713 FORWARD LENGTH=142	LOC_Os09g31040.1	protein|EF hand family protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0005509|calcium ion binding	GO:0005634|nucleus GO:0005829|cytosol
pt2_07224	A	A5S	Potri.002G219000	Potri.002G219000(AS) Potri.002G218300(AS) Potri.002G218800(AS) Potri.002G218700(AS) Potri.002G218500(BS)	POPTR_0002s21970	NA	NA	AT2G44310.1	| Symbols: | Calcium-binding EF-hand family protein | chr2:18309285-18309713 FORWARD LENGTH=142	LOC_Os09g31040.1	protein|EF hand family protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0005509|calcium ion binding	GO:0005634|nucleus GO:0005829|cytosol
pt2_07225	A	A1S	Potri.002G218200	Potri.002G218200(AS)	POPTR_0002s21980	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07226	A	A1S	Potri.002G218100	Potri.002G218100(AS)	POPTR_0002s21990	sp|Q9BYX2|TBD2A_HUMAN	TBC1 domain family member 2A OS=Homo sapiens GN=TBC1D2 PE=1 SV=3	AT3G07890.2	| Symbols: | Ypt/Rab-GAP domain of gyp1p superfamily protein | chr3:2516639-2518784 REVERSE LENGTH=400	LOC_Os08g25010.1	protein|TBC domain containing protein, expressed	IMGA|Medtr5g098140.1	TBC1 domain family member 2B chr5 41948394-41944815 F EGN_Mt100125 20111014	GO:0032313|regulation of Rab GTPase activity GO:0051645|Golgi localization GO:0051646|mitochondrion localization GO:0060151|peroxisome localization	GO:0005097|RAB GTPase activator activity	GO:0005622|intracellular GO:0005737|cytoplasm
pt2_07227	R	R	NA	NA	POPTR_0002s22010	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07228	A	A1S	Potri.002G223300	Potri.002G223300(AS)	POPTR_0002s22020	sp|Q9SJ81|FLA7_ARATH	Fasciclin-like arabinogalactan protein 7 OS=Arabidopsis thaliana GN=FLA7 PE=1 SV=1	AT2G04780.2	| Symbols: FLA7 | FASCICLIN-like arabinoogalactan 7 | chr2:1677488-1678252 FORWARD LENGTH=254	LOC_Os09g30486.1	protein|fasciclin domain containing protein, expressed	IMGA|Medtr5g098060.1	Fasciclin-like arabinogalactan protein chr5 41894651-41896631 F EGN_Mt100125 20111014	GO:0006084|acetyl-CoA metabolic process GO:0009664|plant-type cell wall organization GO:0010075|regulation of meristem growth GO:0016126|sterol biosynthetic process GO:0016132|brassinosteroid biosynthetic process	NA	GO:0005886|plasma membrane GO:0016020|membrane GO:0031225|anchored to membrane GO:0046658|anchored to plasma membrane
pt2_07229	A	A2S	Potri.002G218000	Potri.002G218000(AS) Potri.002G223200(BS)	POPTR_0002s22030	sp|Q9SFC6|GDIR_ARATH	Rho GDP-dissociation inhibitor 1 OS=Arabidopsis thaliana GN=GDI1 PE=1 SV=1	AT3G07880.1	| Symbols: SCN1 | Immunoglobulin E-set superfamily protein | chr3:2514175-2515544 FORWARD LENGTH=240	LOC_Os02g48730.1	protein|rho GDP-dissociation inhibitor 1, putative, expressed	NA	NA	GO:0007015|actin filament organization GO:0009932|cell tip growth GO:0010053|root epidermal cell differentiation	GO:0005094|Rho GDP-dissociation inhibitor activity GO:0005515|protein binding	GO:0005737|cytoplasm
pt2_07230	A	A1S	Potri.002G223100	Potri.002G223100(AS)	POPTR_0002s22040	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07231	A	A3S	Potri.002G223000	Potri.002G223000(AS) Potri.002G217900(AS) Potri.014G162600(DS)	POPTR_0002s22050	sp|Q9SFC7|FB135_ARATH	F-box protein At3g07870 OS=Arabidopsis thaliana GN=At3g07870 PE=2 SV=1	AT3G07870.1	| Symbols: | F-box and associated interaction domains-containing protein | chr3:2510871-2512124 FORWARD LENGTH=417	LOC_Os09g30180.3	protein|OsFBX331 - F-box domain containing protein, expressed	IMGA|Medtr5g022040.1	F-box family protein chr5 8390749-8379216 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_07232	A	A2S	Potri.002G217800	Potri.002G217800(AS) Potri.002G222900(AS)	POPTR_0002s22060	NA	NA	AT5G35732.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G04795.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr5:13897961-13898263 FORWARD LENGTH=100	NA	NA	IMGA|Medtr5g088550.1	hypothetical protein chr5 37391436-37390998 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07233	R	R	NA	NA	POPTR_0002s22070	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07234	A	A1S	Potri.002G222800	Potri.002G222800(AS)	POPTR_0002s22080	sp|Q9FGK3|MO25N_ARATH	Putative MO25-like protein At5g47540 OS=Arabidopsis thaliana GN=At5g47540 PE=2 SV=1	AT5G47540.1	| Symbols: | Mo25 family protein | chr5:19283265-19285328 REVERSE LENGTH=343	LOC_Os07g39630.1	protein|calcium-binding protein, putative, expressed	NA	NA	GO:0008150|biological_process	NA	GO:0005737|cytoplasm
pt2_07235	A	A1S	Potri.002G222700	Potri.002G222700(AS)	POPTR_0002s22090	sp|Q94BT2|AIR12_ARATH	Auxin-induced in root cultures protein 12 OS=Arabidopsis thaliana GN=AIR12 PE=1 SV=3	AT5G35735.1	| Symbols: | Auxin-responsive family protein | chr5:13900913-13902934 REVERSE LENGTH=404	LOC_Os03g09900.1	protein|membrane protein, putative, expressed	IMGA|Medtr5g097620.1	Auxin-induced in root cultures protein chr5 41730891-41729403 F EGN_Mt100125 20111014	GO:0007275|multicellular organismal development GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process	NA	GO:0005886|plasma membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_07236	A	A2S	Potri.002G222600	Potri.002G222600(AS) Potri.014G161700(DS)	POPTR_0002s22100	NA	NA	AT2G04850.1	| Symbols: | Auxin-responsive family protein | chr2:1704298-1705608 FORWARD LENGTH=404	LOC_Os03g09850.1	protein|auxin-responsive protein-related, putative, expressed	IMGA|Medtr5g097620.1	Auxin-induced in root cultures protein chr5 41730891-41729403 F EGN_Mt100125 20111014	NA	NA	GO:0005576|extracellular region GO:0016020|membrane GO:0016021|integral to membrane
pt2_07237	A	A1S	Potri.002G222500	Potri.002G222500(AS)	POPTR_0002s22110	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07238	A	A1S	Potri.002G222400	Potri.002G222400(AS)	POPTR_0002s22120	sp|Q98SJ2|DAZP1_XENLA	DAZ-associated protein 1 OS=Xenopus laevis GN=dazap1 PE=1 SV=1	AT3G07810.1	| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr3:2492875-2495052 FORWARD LENGTH=494	LOC_Os11g41890.1	protein|RNA recognition motif containing protein, putative, expressed	IMGA|Medtr5g097580.1	Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like protein chr5 41711192-41715991 F EGN_Mt100125 20111014	NA	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005576|extracellular region
pt2_07239	A	A1S	Potri.002G222300	Potri.002G222300(AS)	POPTR_0002s22130	sp|O81263|KITH_ORYSJ	Thymidine kinase OS=Oryza sativa subsp. japonica GN=TK PE=2 SV=2	AT3G07800.1	| Symbols: | Thymidine kinase | chr3:2489944-2490935 REVERSE LENGTH=238	LOC_Os03g02200.2	protein|thymidine kinase, putative, expressed	NA	NA	GO:0009061|anaerobic respiration GO:0009165|nucleotide biosynthetic process GO:0019690|pyrimidine deoxyribonucleoside interconversion	GO:0004797|thymidine kinase activity	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_07240	A	A1S	Potri.002G222200	Potri.002G222200(AS)	POPTR_0002s22140	sp|Q9LNG5|PPP7L_ARATH	Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana GN=At1g48120 PE=2 SV=1	AT2G04865.1	| Symbols: | Aminotransferase-like, plant mobile domain family protein | chr2:1712149-1714599 FORWARD LENGTH=667	LOC_Os07g32412.2	protein|transposon protein, putative, unclassified, expressed	IMGA|Medtr5g072460.1	Ubiquitin-activating enzyme E1 chr5 29824205-29811181 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07241	A	A1S	Potri.002G222100	Potri.002G222100(AS)	POPTR_0002s22150	sp|Q96DF8|DGC14_HUMAN	Protein DGCR14 OS=Homo sapiens GN=DGCR14 PE=1 SV=1	AT3G07790.1	| Symbols: | DGCR14-related | chr3:2487491-2489017 FORWARD LENGTH=508	LOC_Os06g30710.1	protein|DGCR14, putative, expressed	IMGA|Medtr5g097510.1	Protein DGCR14 chr5 41680342-41681874 E EGN_Mt100125 20111014	GO:0008150|biological_process GO:0042732|D-xylose metabolic process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_07242	A	A1S	Potri.002G222000	Potri.002G222000(AS)	POPTR_0002s22160	NA	NA	NA	NA	LOC_Os12g08080.1	protein|transposon protein, putative, unclassified, expressed	NA	NA	GO:0008150|biological_process	GO:0008270|zinc ion binding	GO:0005575|cellular_component
pt2_07243	G	G1	NA	NA	POPTR_0002s22170	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07244	A	A1S	Potri.002G221600	Potri.002G221600(AS)	POPTR_0002s22180	sp|Q9SI37|WRKY1_ARATH	WRKY transcription factor 1 OS=Arabidopsis thaliana GN=WRKY1 PE=1 SV=1	AT2G04880.2	| Symbols: ZAP1, ATWRKY1, WRKY1 | zinc-dependent activator protein-1 | chr2:1718557-1720219 FORWARD LENGTH=463	LOC_Os07g39480.1	protein|WRKY87, expressed	IMGA|Medtr5g094430.1	WRKY transcription factor chr5 40230167-40234129 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009863|salicylic acid mediated signaling pathway GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_07245	A	A2S	Potri.002G221700	Potri.002G221700(AS) Potri.002G221600(AA)	POPTR_0002s22190	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07246	A	A2S	Potri.002G221500	Potri.002G221500(AS) Potri.014G164800(DS)	POPTR_0002s22210	sp|Q9LUB7|OBE2_ARATH	Protein OBERON 2 OS=Arabidopsis thaliana GN=OBE2 PE=1 SV=1	AT5G48160.2	| Symbols: OBE2 | Protein of unknown function (DUF1423) | chr5:19528019-19529820 REVERSE LENGTH=574	LOC_Os12g32980.1	protein|potyvirus VPg interacting protein, putative, expressed	IMGA|Medtr5g097360.1	Potyvirus VPg interacting protein chr5 41607135-41610779 F EGN_Mt100125 20111014	GO:0009793|embryo development ending in seed dormancy GO:0010071|root meristem specification GO:0010078|maintenance of root meristem identity GO:0010468|regulation of gene expression GO:0010492|maintenance of shoot apical meristem identity GO:0031347|regulation of defense response GO:0046740|spread of virus in host, cell to cell GO:0080022|primary root development	GO:0005515|protein binding GO:0008270|zinc ion binding GO:0042803|protein homodimerization activity GO:0046982|protein heterodimerization activity	GO:0005634|nucleus GO:0009536|plastid
pt2_07247	A	A1S	Potri.002G221400	Potri.002G221400(AS)	POPTR_0002s22220	sp|P27518|CB21_GOSHI	Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2	AT2G05070.1	| Symbols: LHCB2.2, LHCB2 | photosystem II light harvesting complex gene 2.2 | chr2:1799436-1800329 REVERSE LENGTH=265	LOC_Os03g39610.1	protein|chlorophyll A-B binding protein, putative, expressed	IMGA|Medtr5g097280.1	Chlorophyll a/b binding protein chr5 41563313-41564811 F EGN_Mt100125 20111014	GO:0009765|photosynthesis, light harvesting GO:0015979|photosynthesis	GO:0016168|chlorophyll binding	GO:0005774|vacuolar membrane GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009579|thylakoid GO:0009941|chloroplast envelope GO:0010287|plastoglobule GO:0016020|membrane GO:0030076|light-harvesting complex
pt2_07248	A	A1S	Potri.002G221300	Potri.002G221300(AS)	POPTR_0002s22230	NA	NA	AT2G05120.1	| Symbols: | Nucleoporin, Nup133/Nup155-like | chr2:1842069-1846858 REVERSE LENGTH=1285	LOC_Os03g12450.1	protein|nucleoporin, putative, expressed	IMGA|Medtr5g097260.1	Nucleoporin chr5 41542922-41552388 E EGN_Mt100125 20111014	GO:0009560|embryo sac egg cell differentiation	GO:0005515|protein binding	GO:0005634|nucleus GO:0009507|chloroplast
pt2_07249	A	A2S	Potri.002G217700	Potri.002G217700(AS) Potri.002G221300(AS)	POPTR_0002s22230	NA	NA	AT2G05120.1	| Symbols: | Nucleoporin, Nup133/Nup155-like | chr2:1842069-1846858 REVERSE LENGTH=1285	LOC_Os03g12450.1	protein|nucleoporin, putative, expressed	IMGA|Medtr5g097260.1	Nucleoporin chr5 41542922-41552388 E EGN_Mt100125 20111014	GO:0009560|embryo sac egg cell differentiation	GO:0005515|protein binding	GO:0005634|nucleus GO:0009507|chloroplast
pt2_07250	C	C2S	Potri.002G221300	Potri.002G221300(CS) Potri.002G217700(CS)	NA	NA	AT2G05120.1	| Symbols: | Nucleoporin, Nup133/Nup155-like | chr2:1842069-1846858 REVERSE LENGTH=1285	LOC_Os03g12450.1	protein|nucleoporin, putative, expressed	IMGA|Medtr5g097260.1	Nucleoporin chr5 41542922-41552388 E EGN_Mt100125 20111014	GO:0009560|embryo sac egg cell differentiation	GO:0005515|protein binding	GO:0005634|nucleus GO:0009507|chloroplast
pt2_07251	A	A2S	Potri.002G221100	Potri.002G221100(AS) Potri.002G217600(AS)	POPTR_0002s22240	sp|Q9SJ41|C3H18_ARATH	Zinc finger CCCH domain-containing protein 18 OS=Arabidopsis thaliana GN=At2g05160 PE=2 SV=1	AT2G05160.1	| Symbols: | CCCH-type zinc fingerfamily protein with RNA-binding domain | chr2:1859011-1860931 REVERSE LENGTH=536	LOC_Os08g03310.3	protein|zinc finger family protein, putative, expressed	IMGA|Medtr5g094700.1	Zinc finger CCCH domain-containing protein chr5 40341719-40337192 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_07252	A	A2S	Potri.002G221100	Potri.002G221100(AS) Potri.002G217600(AS)	POPTR_0002s22250	sp|Q9SJ41|C3H18_ARATH	Zinc finger CCCH domain-containing protein 18 OS=Arabidopsis thaliana GN=At2g05160 PE=2 SV=1	AT2G05160.1	| Symbols: | CCCH-type zinc fingerfamily protein with RNA-binding domain | chr2:1859011-1860931 REVERSE LENGTH=536	LOC_Os08g03310.3	protein|zinc finger family protein, putative, expressed	IMGA|Medtr5g094700.1	Zinc finger CCCH domain-containing protein chr5 40341719-40337192 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_07253	A	A2S	Potri.002G217500	Potri.002G217500(AS) Potri.002G221000(AS)	POPTR_0002s22260	sp|Q6KHF9|DNAJ_MYCMO	Chaperone protein DnaJ OS=Mycoplasma mobile (strain ATCC 43663 / 163K / NCTC 11711) GN=dnaJ PE=3 SV=1	AT2G05230.1	| Symbols: | DNAJ heat shock N-terminal domain-containing protein | chr2:1899818-1901938 REVERSE LENGTH=706	LOC_Os02g30620.3	protein|dnaJ domain containing protein, expressed	IMGA|Medtr5g097170.1	Curved DNA-binding protein chr5 41502165-41505408 E EGN_Mt100125 20111014	GO:0006457|protein folding GO:0008150|biological_process	GO:0003674|molecular_function GO:0031072|heat shock protein binding	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_07254	D	D2S	Potri.015G047200	Potri.015G047200(DS) Potri.019G059700(DS)	POPTR_0002s22270	NA	NA	NA	NA	NA	NA	NA	NA	GO:0009409|response to cold GO:0009637|response to blue light GO:0010114|response to red light GO:0010218|response to far red light GO:0015977|carbon fixation GO:0015979|photosynthesis	GO:0005507|copper ion binding GO:0016984|ribulose-bisphosphate carboxylase activity	GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009570|chloroplast stroma GO:0009573|chloroplast ribulose bisphosphate carboxylase complex GO:0009579|thylakoid GO:0009941|chloroplast envelope GO:0016020|membrane GO:0022626|cytosolic ribosome GO:0031977|thylakoid lumen GO:0048046|apoplast
pt2_07255	A	A2S	Potri.002G220800	Potri.002G220800(AS) Potri.002G217400(BS)	POPTR_0002s22280	NA	NA	AT2G04039.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2996 (InterPro:IPR021374); Has 159 Blast hits to 159 proteins in 52 species: Archae - 0; Bacteria - 76; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). | chr2:1333464-1334438 FORWARD LENGTH=199	NA	NA	NA	NA	GO:0015979|photosynthesis	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_07256	A	A2S	Potri.002G217300	Potri.002G217300(AS) Potri.014G172200(DS)	POPTR_0002s22290	sp|Q4KLL4|TM9S4_RAT	Transmembrane 9 superfamily member 4 OS=Rattus norvegicus GN=Tm9sf4 PE=2 SV=1	AT4G12650.1	| Symbols: | Endomembrane protein 70 protein family | chr4:7468207-7470165 REVERSE LENGTH=652	LOC_Os08g38820.1	protein|transmembrane 9 superfamily member, putative, expressed	IMGA|Medtr5g098730.1	Transmembrane 9 superfamily protein member chr5 42181709-42179497 E EGN_Mt100125 20111014	NA	NA	GO:0005768|endosome GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0009506|plasmodesma GO:0016021|integral to membrane
pt2_07257	A	A1S	Potri.002G217200	Potri.002G217200(AS)	POPTR_0002s22300	sp|Q9SU08|AUXI1_ARATH	Auxilin-related protein 1 OS=Arabidopsis thaliana GN=At4g12780 PE=1 SV=2	AT4G12780.1	| Symbols: | Chaperone DnaJ-domain superfamily protein | chr4:7512200-7516655 FORWARD LENGTH=904	LOC_Os12g36180.1	protein|auxilin, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0005515|protein binding GO:0031072|heat shock protein binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane
pt2_07258	A	A1S	Potri.002G217100	Potri.002G217100(AS)	POPTR_0002s22310	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07259	A	A1S	Potri.002G217000	Potri.002G217000(AS)	POPTR_0002s22320	NA	NA	AT3G07660.1	| Symbols: | Kinase-related protein of unknown function (DUF1296) | chr3:2445275-2450372 REVERSE LENGTH=841	LOC_Os09g08670.1	protein|protein of unknown function DUF1296 domain containing protein, expressed	IMGA|Medtr5g069290.1	hypothetical protein chr5 28344719-28357086 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07260	G	G1	NA	NA	POPTR_0002s22330	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07261	G	G4	NA	NA	POPTR_0002s22335	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07262	A	A2S	Potri.T172400	Potri.T172400(AS) Potri.002G216900(AS)	POPTR_0002s22340	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07263	A	A1S	Potri.002G216800	Potri.002G216800(AS)	POPTR_0002s22350	sp|Q39214|RPM1_ARATH	Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1 PE=1 SV=1	AT3G07040.1	| Symbols: RPM1, RPS3 | NB-ARC domain-containing disease resistance protein | chr3:2226244-2229024 REVERSE LENGTH=926	LOC_Os04g46300.1	protein|disease resistance protein RPM1, putative, expressed	IMGA|Medtr5g027910.1	Nbs-lrr resistance protein chr5 11402195-11405966 E EGN_Mt100125 20111014	GO:0006952|defense response GO:0009626|plant-type hypersensitive response	GO:0000166|nucleotide binding GO:0005515|protein binding GO:0043531|ADP binding	GO:0005886|plasma membrane
pt2_07264	A	A1S	Potri.002G216700	Potri.002G216700(AS)	POPTR_0002s22360	NA	NA	AT5G05800.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 881 Blast hits to 512 proteins in 30 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 38; Plants - 833; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). | chr5:1743234-1744751 REVERSE LENGTH=449	ChrUn.fgenesh.mRNA.24	protein|hypothetical protein	IMGA|Medtr5g010555.1	PIF-like transposase chr5 2609522-2605622 E EGN_Mt100125 20111014	GO:0008150|biological_process GO:0048573|photoperiodism, flowering	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_07265	C	C1S	Potri.002G216700	Potri.002G216700(CS)	NA	NA	AT5G05800.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 881 Blast hits to 512 proteins in 30 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 38; Plants - 833; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). | chr5:1743234-1744751 REVERSE LENGTH=449	ChrUn.fgenesh.mRNA.24	protein|hypothetical protein	IMGA|Medtr5g010555.1	PIF-like transposase chr5 2609522-2605622 E EGN_Mt100125 20111014	GO:0008150|biological_process GO:0048573|photoperiodism, flowering	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_07266	A	A1S	Potri.002G216600	Potri.002G216600(AS)	POPTR_0002s22380	NA	NA	AT3G24740.2	| Symbols: | Protein of unknown function (DUF1644) | chr3:9032397-9033461 FORWARD LENGTH=354	LOC_Os04g04010.1	protein|expressed protein	NA	NA	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_07267	A	A2S	Potri.019G043500	Potri.019G043500(AS) Potri.T029900(AS)	POPTR_0002s22390	NA	NA	AT5G53390.1	| Symbols: | O-acyltransferase (WSD1-like) family protein | chr5:21656951-21659207 REVERSE LENGTH=486	NA	NA	NA	NA	NA	GO:0003674|molecular_function GO:0004144|diacylglycerol O-acyltransferase activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07268	C	C1A	Potri.002G216500	Potri.002G216500(CA)	sp|Q8SAG3|ADF_VITVI	Actin-depolymerizing factor OS=Vitis vinifera PE=2 SV=1	AT2G31200.1	| Symbols: ADF6, ATADF6 | actin depolymerizing factor 6 | chr2:13294171-13294948 FORWARD LENGTH=146	LOC_Os12g43340.1	protein|actin-depolymerizing factor, putative, expressed	IMGA|Medtr5g010430.1	Actin depolymerizing factor chr5 2553660-2554177 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003779|actin binding	GO:0005622|intracellular GO:0005737|cytoplasm
pt2_07269	A	A1S	Potri.002G216400	Potri.002G216400(AS)	POPTR_0002s22410	sp|Q56WD9|THIK2_ARATH	3-ketoacyl-CoA thiolase 2, peroxisomal OS=Arabidopsis thaliana GN=PED1 PE=1 SV=2	AT2G33150.1	| Symbols: PKT3, PED1, KAT2 | peroxisomal 3-ketoacyl-CoA thiolase 3 | chr2:14047814-14050983 REVERSE LENGTH=462	LOC_Os10g31950.1	protein|3-ketoacyl-CoA thiolase, peroxisomal precursor, putative, expressed	IMGA|Medtr5g098310.1	"Acetyl-CoA acetyltransferase, cytosolic" chr5 42013142-42007793 F EGN_Mt100125 20111014	GO:0006635|fatty acid beta-oxidation GO:0008152|metabolic process GO:0009407|toxin catabolic process GO:0009611|response to wounding GO:0009695|jasmonic acid biosynthetic process GO:0009789|positive regulation of abscisic acid mediated signaling pathway GO:0010111|glyoxysome organization GO:0019395|fatty acid oxidation GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	GO:0003824|catalytic activity GO:0003988|acetyl-CoA C-acyltransferase activity GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0005730|nucleolus GO:0005739|mitochondrion GO:0005774|vacuolar membrane GO:0005777|peroxisome GO:0009507|chloroplast GO:0016020|membrane
pt2_07270	A	A1S	Potri.002G216300	Potri.002G216300(AS)	POPTR_0002s22420	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07271	A	A2S	Potri.002G216200	Potri.002G216200(AS) Potri.014G179700(BS)	POPTR_0002s22430	sp|O22466|MSI1_SOLLC	WD-40 repeat-containing protein MSI1 OS=Solanum lycopersicum GN=MSI1 PE=2 SV=1	AT5G58230.1	| Symbols: MSI1, MEE70, ATMSI1 | Transducin/WD40 repeat-like superfamily protein | chr5:23556112-23557994 FORWARD LENGTH=424	LOC_Os03g43890.1	protein|WD domain, G-beta repeat domain containing protein, expressed	IMGA|Medtr5g024090.1	Glutamate-rich WD repeat-containing protein chr5 9390876-9395536 H EGN_Mt100125 20111014	GO:0006275|regulation of DNA replication GO:0006349|regulation of gene expression by genetic imprinting GO:0007275|multicellular organismal development GO:0008283|cell proliferation GO:0009555|pollen development GO:0009793|embryo development ending in seed dormancy GO:0009909|regulation of flower development GO:0009965|leaf morphogenesis GO:0010026|trichome differentiation GO:0010214|seed coat development GO:0010389|regulation of G2/M transition of mitotic cell cycle GO:0016568|chromatin modification GO:0016570|histone modification GO:0031507|heterochromatin assembly GO:0045787|positive regulation of cell cycle GO:0048316|seed development GO:0048366|leaf development GO:0048449|floral organ formation	GO:0005515|protein binding	GO:0005634|nucleus GO:0009507|chloroplast GO:0016585|chromatin remodeling complex GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_07272	A	A1S	Potri.002G216100	Potri.002G216100(AS)	POPTR_0002s22440	sp|O64886|COX10_ARATH	Protoheme IX farnesyltransferase, mitochondrial OS=Arabidopsis thaliana GN=COX10 PE=2 SV=4	AT2G44520.1	| Symbols: COX10 | cytochrome c oxidase 10 | chr2:18379660-18381731 FORWARD LENGTH=431	LOC_Os01g34390.1	protein|prenyltransferase, putative, expressed	NA	NA	GO:0006783|heme biosynthetic process GO:0048034|heme o biosynthetic process	GO:0004659|prenyltransferase activity GO:0008495|protoheme IX farnesyltransferase activity	GO:0005886|plasma membrane GO:0016021|integral to membrane GO:0031966|mitochondrial membrane
pt2_07273	A	A1S	Potri.002G216000	Potri.002G216000(AS)	POPTR_0002s22450	sp|Q3ECP6|GDL22_ARATH	GDSL esterase/lipase At1g54790 OS=Arabidopsis thaliana GN=At1g54790 PE=2 SV=1	AT1G54790.3	| Symbols: | GDSL-like Lipase/Acylhydrolase superfamily protein | chr1:20441124-20442634 REVERSE LENGTH=383	LOC_Os05g33270.1	protein|GDSL-like lipase/acylhydrolase, putative, expressed	IMGA|Medtr1g030220.1	Early nodulin chr1 8769562-8773292 E EGN_Mt100125 20111014	GO:0006629|lipid metabolic process GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process	GO:0004091|carboxylesterase activity GO:0016788|hydrolase activity, acting on ester bonds	GO:0005576|extracellular region
pt2_07274	A	A1S	Potri.002G215900	Potri.002G215900(AS)	POPTR_0002s22460	sp|Q9ZT91|EFTM_ARATH	Elongation factor Tu, mitochondrial OS=Arabidopsis thaliana GN=TUFA PE=1 SV=1	AT4G02930.1	| Symbols: | GTP binding Elongation factor Tu family protein | chr4:1295751-1298354 REVERSE LENGTH=454	LOC_Os03g63410.1	protein|elongation factor Tu, putative, expressed	IMGA|Medtr1g013680.1	Elongation factor 1-alpha chr1 3477744-3479259 E EGN_Mt100125 20111014	GO:0006414|translational elongation GO:0009220|pyrimidine ribonucleotide biosynthetic process GO:0046686|response to cadmium ion	GO:0003746|translation elongation factor activity GO:0003924|GTPase activity GO:0005524|ATP binding GO:0005525|GTP binding GO:0008270|zinc ion binding GO:0050897|cobalt ion binding	GO:0005618|cell wall GO:0005622|intracellular GO:0005739|mitochondrion
pt2_07275	A	A1S	Potri.002G215800	Potri.002G215800(AS)	POPTR_0002s22470	NA	NA	AT4G02920.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03340.1); Has 41 Blast hits to 41 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:1292816-1294670 FORWARD LENGTH=418	LOC_Os05g05140.2	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_07276	C	C1S	Potri.002G215800	Potri.002G215800(CS)	NA	NA	AT4G02920.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03340.1); Has 41 Blast hits to 41 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:1292816-1294670 FORWARD LENGTH=418	LOC_Os05g05140.2	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_07277	A	A1S	Potri.002G215700	Potri.002G215700(AS)	POPTR_0002s22490	sp|Q4IEV5|REXO4_GIBZE	RNA exonuclease 4 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=REX4 PE=3 SV=1	AT2G48100.3	| Symbols: | Exonuclease family protein | chr2:19671245-19672847 FORWARD LENGTH=344	LOC_Os02g47920.1	protein|ZOS2-16 - C2H2 zinc finger protein, expressed	NA	NA	GO:0007346|regulation of mitotic cell cycle	GO:0003676|nucleic acid binding GO:0004527|exonuclease activity GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_07278	A	A1S	Potri.002G215700	Potri.002G215700(AS)	POPTR_0002s22490	sp|Q4IEV5|REXO4_GIBZE	RNA exonuclease 4 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=REX4 PE=3 SV=1	AT2G48100.3	| Symbols: | Exonuclease family protein | chr2:19671245-19672847 FORWARD LENGTH=344	LOC_Os02g47920.1	protein|ZOS2-16 - C2H2 zinc finger protein, expressed	NA	NA	GO:0007346|regulation of mitotic cell cycle	GO:0003676|nucleic acid binding GO:0004527|exonuclease activity GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_07279	A	A1S	Potri.002G215600	Potri.002G215600(AS)	POPTR_0002s22500	sp|Q9LUG9|MD33A_ARATH	Mediator of RNA polymerase II transcription subunit 33A OS=Arabidopsis thaliana GN=MED33A PE=1 SV=1	AT3G23590.1	| Symbols: RFR1, MED33A | REF4-related 1 | chr3:8467638-8473469 FORWARD LENGTH=1309	LOC_Os07g11000.1	protein|structural constituent of ribosome, putative, expressed	NA	NA	GO:0007155|cell adhesion GO:0009698|phenylpropanoid metabolic process GO:0010090|trichome morphogenesis GO:0045010|actin nucleation GO:0048765|root hair cell differentiation GO:0071555|cell wall organization GO:2000762|regulation of phenylpropanoid metabolic process	GO:0003674|molecular_function	GO:0016020|membrane GO:0016592|mediator complex
pt2_07280	G	G2	NA	NA	POPTR_0002s22510	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07281	A	A1S	Potri.002G219800	Potri.002G219800(AS)	POPTR_0002s22520	NA	NA	NA	NA	NA	NA	NA	NA	GO:0009073|aromatic amino acid family biosynthetic process GO:0016226|iron-sulfur cluster assembly	NA	GO:0005739|mitochondrion
pt2_07282	A	A2S	Potri.002G215400	Potri.002G215400(AS) Potri.002G219900(AS)	POPTR_0002s22530	sp|Q8L735|ISOA2_ARATH	Isoamylase 2, chloroplastic OS=Arabidopsis thaliana GN=ISA2 PE=1 SV=2	AT1G03310.1	| Symbols: ATISA2, ISA2, DBE1, BE2 | debranching enzyme 1 | chr1:813975-816623 FORWARD LENGTH=882	LOC_Os05g32710.1	protein|Alpha amylase, catalytic domain containing protein, expressed	NA	NA	GO:0000023|maltose metabolic process GO:0005975|carbohydrate metabolic process GO:0010021|amylopectin biosynthetic process GO:0019252|starch biosynthetic process GO:0019761|glucosinolate biosynthetic process GO:0043085|positive regulation of catalytic activity	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0004556|alpha-amylase activity GO:0019156|isoamylase activity GO:0043169|cation binding	GO:0009507|chloroplast
pt2_07283	A	A2S	Potri.002G220000	Potri.002G220000(AS) Potri.002G215300(AS)	POPTR_0002s22540	NA	NA	AT3G63090.1	| Symbols: | Ubiquitin carboxyl-terminal hydrolase family protein | chr3:23313617-23314831 FORWARD LENGTH=404	LOC_Os01g18880.1	protein|ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed	IMGA|Medtr1g072550.1	hypothetical protein chr1 18188103-18185295 E EGN_Mt100125 20111014	NA	NA	NA
pt2_07284	A	A2S	Potri.002G215200	Potri.002G215200(AS) Potri.002G220100(AS)	POPTR_0002s22550	NA	NA	AT3G63095.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:23315506-23316258 FORWARD LENGTH=250	LOC_Os07g46210.1	protein|LTPL2 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	NA	NA	NA	NA	NA
pt2_07285	A	A3S	Potri.002G215100	Potri.002G215100(AS) Potri.002G220200(BS) Potri.014G139500(DS)	POPTR_0002s22560	sp|O80860|FTSH2_ARATH	ATP-dependent zinc metalloprotease FTSH 2, chloroplastic OS=Arabidopsis thaliana GN=FTSH2 PE=1 SV=1	AT2G30950.1	| Symbols: VAR2, FTSH2 | FtsH extracellular protease family | chr2:13174692-13177064 FORWARD LENGTH=695	LOC_Os06g45820.1	protein|OsFtsH2 FtsH protease, homologue of AtFtsH2/8, expressed	IMGA|Medtr5g069780.2	Cell division protease ftsH-like protein chr5 28612359-28618409 F EGN_Mt100125 20111014	GO:0006098|pentose-phosphate shunt GO:0006364|rRNA processing GO:0008152|metabolic process GO:0009902|chloroplast relocation GO:0010027|thylakoid membrane organization GO:0010205|photoinhibition GO:0010206|photosystem II repair GO:0010207|photosystem II assembly GO:0010304|PSII associated light-harvesting complex II catabolic process GO:0030163|protein catabolic process GO:0034660|ncRNA metabolic process GO:0035304|regulation of protein dephosphorylation GO:0042744|hydrogen peroxide catabolic process GO:0042793|transcription from plastid promoter GO:0045893|positive regulation of transcription, DNA-dependent GO:0072593|reactive oxygen species metabolic process	GO:0000166|nucleotide binding GO:0004176|ATP-dependent peptidase activity GO:0004222|metalloendopeptidase activity GO:0005524|ATP binding GO:0008237|metallopeptidase activity GO:0008270|zinc ion binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009579|thylakoid GO:0009941|chloroplast envelope GO:0016020|membrane GO:0031977|thylakoid lumen
pt2_07286	A	A1S	Potri.002G215000	Potri.002G215000(AS)	POPTR_0002s22570	NA	NA	AT3G26670.3	| Symbols: | Protein of unknown function (DUF803) | chr3:9798236-9800562 REVERSE LENGTH=441	LOC_Os02g31874.2	protein|DUF803 domain containing, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005886|plasma membrane
pt2_07287	A	A2S	Potri.002G220200	Potri.002G220200(AS) Potri.002G215100(BS)	POPTR_0002s22580	sp|O80860|FTSH2_ARATH	ATP-dependent zinc metalloprotease FTSH 2, chloroplastic OS=Arabidopsis thaliana GN=FTSH2 PE=1 SV=1	AT2G30950.1	| Symbols: VAR2, FTSH2 | FtsH extracellular protease family | chr2:13174692-13177064 FORWARD LENGTH=695	LOC_Os06g45820.1	protein|OsFtsH2 FtsH protease, homologue of AtFtsH2/8, expressed	IMGA|Medtr5g069780.2	Cell division protease ftsH-like protein chr5 28612359-28618409 F EGN_Mt100125 20111014	GO:0006098|pentose-phosphate shunt GO:0006364|rRNA processing GO:0008152|metabolic process GO:0009902|chloroplast relocation GO:0010027|thylakoid membrane organization GO:0010205|photoinhibition GO:0010206|photosystem II repair GO:0010207|photosystem II assembly GO:0010304|PSII associated light-harvesting complex II catabolic process GO:0030163|protein catabolic process GO:0034660|ncRNA metabolic process GO:0035304|regulation of protein dephosphorylation GO:0042744|hydrogen peroxide catabolic process GO:0042793|transcription from plastid promoter GO:0045893|positive regulation of transcription, DNA-dependent GO:0072593|reactive oxygen species metabolic process	GO:0000166|nucleotide binding GO:0004176|ATP-dependent peptidase activity GO:0004222|metalloendopeptidase activity GO:0005524|ATP binding GO:0008237|metallopeptidase activity GO:0008270|zinc ion binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009579|thylakoid GO:0009941|chloroplast envelope GO:0016020|membrane GO:0031977|thylakoid lumen
pt2_07288	A	A2S	Potri.002G214900	Potri.002G214900(AS) Potri.002G220300(AS)	POPTR_0002s22590	sp|Q3E6Q1|PPR32_ARATH	Pentatricopeptide repeat-containing protein At1g11290 OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1	AT1G11290.1	| Symbols: CRR22 | Pentatricopeptide repeat (PPR) superfamily protein | chr1:3791454-3793883 REVERSE LENGTH=809	LOC_Os06g02200.1	protein|pentatricopeptide, putative, expressed	IMGA|Medtr1g071240.1	Pentatricopeptide repeat-containing protein chr1 17511913-17505644 H EGN_Mt100125 20111014	GO:0016556|mRNA modification	GO:0004519|endonuclease activity	GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_07289	A	A2S	Potri.002G220400	Potri.002G220400(AS) Potri.002G214800(AS)	POPTR_0002s22600	sp|P12858|G3PA_PEA	Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Pisum sativum GN=GAPA PE=2 SV=2	AT3G26650.1	| Symbols: GAPA, GAPA-1 | glyceraldehyde 3-phosphate dehydrogenase A subunit | chr3:9795226-9796848 FORWARD LENGTH=396	LOC_Os04g38600.2	protein|glyceraldehyde-3-phosphate dehydrogenase, putative, expressed	NA	NA	GO:0006006|glucose metabolic process GO:0006096|glycolysis GO:0006364|rRNA processing GO:0009409|response to cold GO:0009416|response to light stimulus GO:0009637|response to blue light GO:0009644|response to high light intensity GO:0009657|plastid organization GO:0009744|response to sucrose stimulus GO:0009749|response to glucose stimulus GO:0009773|photosynthetic electron transport in photosystem I GO:0010103|stomatal complex morphogenesis GO:0010114|response to red light GO:0010155|regulation of proton transport GO:0010207|photosystem II assembly GO:0010218|response to far red light GO:0015979|photosynthesis GO:0018119|peptidyl-cysteine S-nitrosylation GO:0019253|reductive pentose-phosphate cycle GO:0019684|photosynthesis, light reaction GO:0035304|regulation of protein dephosphorylation GO:0042742|defense response to bacterium GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0005515|protein binding GO:0016620|oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor GO:0050661|NADP binding GO:0051287|NAD binding	GO:0005737|cytoplasm GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope GO:0010319|stromule GO:0016020|membrane GO:0048046|apoplast
pt2_07290	G	G5	NA	NA	POPTR_0002s22610	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07291	A	A2S	Potri.002G220500	Potri.002G220500(AS) Potri.002G214700(AS)	POPTR_0002s22620	sp|Q9LPV9|LWD1_ARATH	WD repeat-containing protein LWD1 OS=Arabidopsis thaliana GN=LWD1 PE=2 SV=1	AT1G12910.1	| Symbols: ATAN11, LWD1 | Transducin/WD40 repeat-like superfamily protein | chr1:4395114-4396154 REVERSE LENGTH=346	LOC_Os02g32430.1	protein|WD domain, G-beta repeat domain containing protein, expressed	NA	NA	GO:0009718|anthocyanin-containing compound biosynthetic process GO:0043153|entrainment of circadian clock by photoperiod GO:0048573|photoperiodism, flowering	GO:0000166|nucleotide binding GO:0044212|transcription regulatory region DNA binding	GO:0005634|nucleus
pt2_07292	A	A1S	Potri.002G214600	Potri.002G214600(AS)	POPTR_0002s22630	sp|Q38959|PP257_ARATH	Pentatricopeptide repeat-containing protein At3g26630, chloroplastic OS=Arabidopsis thaliana GN=PCMP-A6 PE=2 SV=1	AT3G26630.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:9791572-9792939 REVERSE LENGTH=455	LOC_Os05g36350.1	protein|pentatricopeptide, putative, expressed	IMGA|Medtr5g020650.1	Pentatricopeptide repeat-containing protein chr5 7655084-7653528 E EGN_Mt100125 20111014	GO:0008150|biological_process	NA	NA
pt2_07293	C	C2S	Potri.002G214500	Potri.002G214500(CS) Potri.002G220700(CS)	sp|Q9SSE5|COL9_ARATH	Zinc finger protein CONSTANS-LIKE 9 OS=Arabidopsis thaliana GN=COL9 PE=2 SV=1	AT3G07650.4	| Symbols: COL9 | CONSTANS-like 9 | chr3:2442494-2443901 FORWARD LENGTH=372	LOC_Os06g19444.1	protein|CCT/B-box zinc finger protein, putative, expressed	IMGA|Medtr5g069480.1	Zinc finger protein CONSTANS-like protein chr5 28470900-28474190 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0007623|circadian rhythm GO:0048579|negative regulation of long-day photoperiodism, flowering	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_07294	C	C1S	Potri.002G214400	Potri.002G214400(CS)	sp|Q05609|CTR1_ARATH	Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana GN=CTR1 PE=1 SV=1	AT3G58640.2	| Symbols: | Mitogen activated protein kinase kinase kinase-related | chr3:21687153-21692675 REVERSE LENGTH=809	LOC_Os01g48330.1	protein|protein kinase domain containing protein, expressed	IMGA|Medtr5g066490.1	Serine/threonine protein kinase CTR1 chr5 27074324-27066439 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006486|protein glycosylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07295	A	A1S	Potri.002G214400	Potri.002G214400(AS)	POPTR_0002s22670	sp|Q05609|CTR1_ARATH	Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana GN=CTR1 PE=1 SV=1	AT3G58640.2	| Symbols: | Mitogen activated protein kinase kinase kinase-related | chr3:21687153-21692675 REVERSE LENGTH=809	LOC_Os01g48330.1	protein|protein kinase domain containing protein, expressed	IMGA|Medtr5g066490.1	Serine/threonine protein kinase CTR1 chr5 27074324-27066439 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006486|protein glycosylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07296	C	C1S	Potri.002G214400	Potri.002G214400(CS)	sp|Q05609|CTR1_ARATH	Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana GN=CTR1 PE=1 SV=1	AT3G58640.2	| Symbols: | Mitogen activated protein kinase kinase kinase-related | chr3:21687153-21692675 REVERSE LENGTH=809	LOC_Os01g48330.1	protein|protein kinase domain containing protein, expressed	IMGA|Medtr5g066490.1	Serine/threonine protein kinase CTR1 chr5 27074324-27066439 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006486|protein glycosylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07297	A	A1S	Potri.002G214300	Potri.002G214300(AS)	POPTR_0002s22680	sp|Q9SIM9|ORE9_ARATH	F-box protein ORE9 OS=Arabidopsis thaliana GN=ORE9 PE=1 SV=2	AT2G42620.1	| Symbols: MAX2, ORE9, PPS | RNI-like superfamily protein | chr2:17756170-17758251 FORWARD LENGTH=693	LOC_Os06g06050.1	protein|OsFBL27 - F-box domain and LRR containing protein, expressed	NA	NA	GO:0006511|ubiquitin-dependent protein catabolic process GO:0007568|aging GO:0009414|response to water deprivation GO:0009416|response to light stimulus GO:0009616|virus induced gene silencing GO:0009926|auxin polar transport GO:0009934|regulation of meristem structural organization GO:0010016|shoot morphogenesis GO:0010050|vegetative phase change GO:0016567|protein ubiquitination	GO:0004842|ubiquitin-protein ligase activity	GO:0000151|ubiquitin ligase complex GO:0005634|nucleus GO:0019005|SCF ubiquitin ligase complex
pt2_07298	A	A1S	Potri.002G214200	Potri.002G214200(AS)	POPTR_0002s22690	NA	NA	AT2G42610.2	| Symbols: LSH10 | Protein of unknown function (DUF640) | chr2:17748005-17748538 FORWARD LENGTH=177	LOC_Os02g41460.1	protein|DUF640 domain containing protein, putative, expressed	IMGA|Medtr5g072510.1	hypothetical protein chr5 29863728-29865781 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07299	G	G1	NA	NA	POPTR_0002s22700	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07300	R	R	NA	NA	POPTR_0002s22710	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07301	A	A1S	Potri.002G214100	Potri.002G214100(AS)	POPTR_0002s22720	sp|P29194|CAPP2_SORBI	Phosphoenolpyruvate carboxylase 2 OS=Sorghum bicolor PE=3 SV=1	AT1G53310.3	| Symbols: ATPPC1, PEPC1, ATPEPC1, PPC1 | phosphoenolpyruvate carboxylase 1 | chr1:19884261-19888070 REVERSE LENGTH=967	LOC_Os08g27840.1	protein|phosphoenolpyruvate carboxylase, putative, expressed	IMGA|Medtr1g094000.1	Phosphoenolpyruvate carboxylase chr1 26591802-26593620 H EGN_Mt100125 20111014	GO:0006096|glycolysis GO:0006099|tricarboxylic acid cycle GO:0006833|water transport GO:0006972|hyperosmotic response GO:0007030|Golgi organization GO:0009266|response to temperature stimulus GO:0009651|response to salt stress GO:0009744|response to sucrose stimulus GO:0009749|response to glucose stimulus GO:0009750|response to fructose stimulus GO:0015977|carbon fixation GO:0016036|cellular response to phosphate starvation GO:0019375|galactolipid biosynthetic process GO:0046686|response to cadmium ion GO:0051262|protein tetramerization	GO:0003824|catalytic activity GO:0005515|protein binding GO:0008964|phosphoenolpyruvate carboxylase activity	GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0009507|chloroplast GO:0048046|apoplast
pt2_07302	A	A1S	Potri.002G214000	Potri.002G214000(AS)	POPTR_0002s22730	sp|A0JM51|CELF5_XENTR	CUGBP Elav-like family member 5 OS=Xenopus tropicalis GN=celf5 PE=2 SV=1	AT4G03110.1	| Symbols: AtRBP-DR1, RBP-DR1 | RNA-binding protein-defense related 1 | chr4:1376612-1379275 REVERSE LENGTH=441	LOC_Os01g71200.1	protein|RNA recognition motif containing protein, putative, expressed	NA	NA	GO:0000398|mRNA splicing, via spliceosome GO:0009626|plant-type hypersensitive response GO:0080151|positive regulation of salicylic acid mediated signaling pathway	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005737|cytoplasm
pt2_07303	A	A1S	Potri.002G213900	Potri.002G213900(AS)	POPTR_0002s22740	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_07304	A	A2S	Potri.002G213800	Potri.002G213800(AS) Potri.T106300(DS)	POPTR_0002s22750	sp|Q54Y72|GACA_DICDI	Rho GTPase-activating protein gacA OS=Dictyostelium discoideum GN=gacA PE=3 SV=1	AT4G03100.1	| Symbols: | Rho GTPase activating protein with PAK-box/P21-Rho-binding domain | chr4:1374361-1375913 FORWARD LENGTH=430	LOC_Os12g34840.1	protein|rhoGAP domain containing protein, expressed	IMGA|Medtr1g089500.1	Rac GTPase activating protein chr1 24542001-24545026 H EGN_Mt100125 20111014	GO:0000226|microtubule cytoskeleton organization GO:0007165|signal transduction GO:0008283|cell proliferation	GO:0030675|Rac GTPase activator activity	GO:0005622|intracellular GO:0005737|cytoplasm
pt2_07305	C	C1S	Potri.002G213700	Potri.002G213700(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07306	A	A1S	Potri.002G213600	Potri.002G213600(AS)	POPTR_0002s22770	sp|Q9LYC2|NPL41_ARATH	NPL4-like protein 1 OS=Arabidopsis thaliana GN=At3g63000 PE=1 SV=1	AT3G63000.1	| Symbols: NPL41 | NPL4-like protein 1 | chr3:23283836-23285357 FORWARD LENGTH=413	LOC_Os01g27990.1	protein|NPL4, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_07307	A	A1S	Potri.002G213500	Potri.002G213500(AS)	POPTR_0002s22790	sp|A7MB12|UTP15_BOVIN	U3 small nucleolar RNA-associated protein 15 homolog OS=Bos taurus GN=UTP15 PE=2 SV=1	AT2G47990.1	| Symbols: SWA1, EDA13, EDA19 | transducin family protein / WD-40 repeat family protein | chr2:19637010-19638602 REVERSE LENGTH=530	LOC_Os07g12320.1	protein|WD domain, G-beta repeat domain containing protein, expressed	IMGA|Medtr1g089260.1	U3 small nucleolar RNA-associated protein-like protein chr1 24447216-24445624 H EGN_Mt100125 20111014	GO:0000741|karyogamy GO:0006364|rRNA processing GO:0009553|embryo sac development GO:0009560|embryo sac egg cell differentiation GO:0009561|megagametogenesis	GO:0000166|nucleotide binding	GO:0005634|nucleus GO:0005730|nucleolus GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_07308	A	A1S	Potri.002G213400	Potri.002G213400(AS)	POPTR_0002s22800	NA	NA	AT4G03090.1	| Symbols: | sequence-specific DNA binding;sequence-specific DNA binding transcription factors | chr4:1366495-1370937 REVERSE LENGTH=913	LOC_Os05g09630.1	protein|homeobox domain containing protein, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005739|mitochondrion
pt2_07309	A	A2S	Potri.002G213400	Potri.002G213400(AS) Potri.014G135700(BS)	POPTR_0002s22800	NA	NA	AT4G03090.1	| Symbols: | sequence-specific DNA binding;sequence-specific DNA binding transcription factors | chr4:1366495-1370937 REVERSE LENGTH=913	LOC_Os05g09630.1	protein|homeobox domain containing protein, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005739|mitochondrion
pt2_07310	A	A2S	Potri.002G213400	Potri.002G213400(AS) Potri.014G135700(BS)	POPTR_0002s22800	NA	NA	AT4G03090.1	| Symbols: | sequence-specific DNA binding;sequence-specific DNA binding transcription factors | chr4:1366495-1370937 REVERSE LENGTH=913	LOC_Os05g09630.1	protein|homeobox domain containing protein, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005739|mitochondrion
pt2_07311	A	A1S	Potri.002G213300	Potri.002G213300(AS)	POPTR_0002s22810	sp|Q8L7U5|BSL1_ARATH	Serine/threonine-protein phosphatase BSL1 OS=Arabidopsis thaliana GN=BSL1 PE=1 SV=2	AT4G03080.1	| Symbols: BSL1 | BRI1 suppressor 1 (BSU1)-like 1 | chr4:1359935-1365166 REVERSE LENGTH=881	LOC_Os05g05240.1	protein|serine/threonine protein phosphatase, putative, expressed	IMGA|Medtr1g089270.1	Serine/threonine protein phosphatase chr1 24458013-24449186 E EGN_Mt100125 20111014	NA	GO:0004721|phosphoprotein phosphatase activity GO:0004722|protein serine/threonine phosphatase activity GO:0005506|iron ion binding GO:0005515|protein binding GO:0016787|hydrolase activity GO:0030145|manganese ion binding	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_07312	C	C1S	Potri.002G213200	Potri.002G213200(CS)	sp|Q02357|ANK1_MOUSE	Ankyrin-1 OS=Mus musculus GN=Ank1 PE=1 SV=2	AT2G03430.1	| Symbols: | Ankyrin repeat family protein | chr2:1036192-1037536 REVERSE LENGTH=240	LOC_Os03g45290.1	protein|ankyrin repeat domain-containing protein 50, putative, expressed	IMGA|Medtr1g089180.1	Ankyrin repeat domain-containing protein chr1 24419613-24417510 E EGN_Mt100125 20111014	GO:0000724|double-strand break repair via homologous recombination GO:0006259|DNA metabolic process GO:0007062|sister chromatid cohesion GO:0007126|meiosis GO:0007129|synapsis GO:0007131|reciprocal meiotic recombination GO:0007140|male meiosis GO:0008150|biological_process GO:0010332|response to gamma radiation GO:0016444|somatic cell DNA recombination GO:0032204|regulation of telomere maintenance GO:0032504|multicellular organism reproduction GO:0033044|regulation of chromosome organization GO:0042023|DNA endoreduplication GO:0042138|meiotic DNA double-strand break formation GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0043247|telomere maintenance in response to DNA damage GO:0043248|proteasome assembly GO:0045132|meiotic chromosome segregation GO:0051510|regulation of unidimensional cell growth GO:0051788|response to misfolded protein	NA	GO:0005618|cell wall
pt2_07313	G	G1	NA	NA	POPTR_0002s22830	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07314	A	A1S	Potri.002G213100	Potri.002G213100(AS)	POPTR_0002s22840	sp|Q9LYC1|GID1B_ARATH	Gibberellin receptor GID1B OS=Arabidopsis thaliana GN=GID1B PE=1 SV=1	AT3G63010.1	| Symbols: ATGID1B, GID1B | alpha/beta-Hydrolases superfamily protein | chr3:23289717-23290998 FORWARD LENGTH=358	LOC_Os05g33730.1	protein|gibberellin receptor GID1L2, putative, expressed	IMGA|Medtr1g012430.1	Arylacetamide deacetylase chr1 2909844-2908906 H EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0000303|response to superoxide GO:0006612|protein targeting to membrane GO:0007165|signal transduction GO:0008152|metabolic process GO:0008219|cell death GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009605|response to external stimulus GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009739|response to gibberellin stimulus GO:0009740|gibberellic acid mediated signaling pathway GO:0009753|response to jasmonic acid stimulus GO:0009755|hormone-mediated signaling pathway GO:0009845|seed germination GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009873|ethylene mediated signaling pathway GO:0009939|positive regulation of gibberellic acid mediated signaling pathway GO:0010162|seed dormancy process GO:0010325|raffinose family oligosaccharide biosynthetic process GO:0010363|regulation of plant-type hypersensitive response GO:0010476|gibberellin mediated signaling pathway GO:0030968|endoplasmic reticulum unfolded protein response GO:0031348|negative regulation of defense response GO:0042538|hyperosmotic salinity response GO:0043069|negative regulation of programmed cell death GO:0048444|floral organ morphogenesis GO:0050832|defense response to fungus	GO:0005515|protein binding GO:0016787|hydrolase activity	GO:0005634|nucleus
pt2_07315	R	R	NA	NA	POPTR_0002s22850	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07316	A	A2S	Potri.002G212900	Potri.002G212900(AS) Potri.002G212800(AA)	POPTR_0002s22860	sp|P93051|ERDL7_ARATH	Sugar transporter ERD6-like 7 OS=Arabidopsis thaliana GN=At2g48020 PE=2 SV=2	AT2G48020.1	| Symbols: | Major facilitator superfamily protein | chr2:19644441-19647007 FORWARD LENGTH=463	LOC_Os11g42430.1	protein|transporter family protein, putative, expressed	IMGA|Medtr5g020270.1	Sugar transporter ERD6-like protein chr5 7498368-7494668 H EGN_Mt100125 20111014	GO:0006810|transport GO:0055085|transmembrane transport	GO:0005215|transporter activity GO:0005351|sugar:hydrogen symporter activity GO:0015144|carbohydrate transmembrane transporter activity GO:0022857|transmembrane transporter activity GO:0022891|substrate-specific transmembrane transporter activity	GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005886|plasma membrane GO:0009507|chloroplast GO:0016020|membrane GO:0016021|integral to membrane
pt2_07317	A	A3S	Potri.T149800	Potri.T149800(AS) Potri.002G212800(AS) Potri.014G136700(DS)	POPTR_0002s22870	sp|A7RWD2|CIAO1_NEMVE	Probable cytosolic iron-sulfur protein assembly protein OS=Nematostella vectensis GN=v1g226592 PE=3 SV=1	AT2G26060.1	| Symbols: emb1345 | Transducin/WD40 repeat-like superfamily protein | chr2:11102400-11105127 FORWARD LENGTH=352	LOC_Os07g14830.1	protein|WD domain, G-beta repeat domain containing protein, expressed	IMGA|Medtr5g022690.1	U4/U6 small nuclear ribonucleoprotein PRP4-like protein chr5 8715534-8712947 H EGN_Mt100125 20111014	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0009086|methionine biosynthetic process GO:0009793|embryo development ending in seed dormancy GO:0010048|vernalization response GO:0048573|photoperiodism, flowering GO:0051604|protein maturation	GO:0000166|nucleotide binding	GO:0005737|cytoplasm GO:0005834|heterotrimeric G-protein complex
pt2_07318	A	A2S	Potri.T149700	Potri.T149700(AS) Potri.002G212700(BS)	POPTR_0002s22890	sp|Q9AT00|AB13I_ARATH	Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic OS=Arabidopsis thaliana GN=TGD3 PE=1 SV=1	AT1G65410.1	| Symbols: ATNAP11, TGD3, NAP11 | non-intrinsic ABC protein 11 | chr1:24295362-24297332 FORWARD LENGTH=345	LOC_Os03g46740.2	protein|ABC transporter, ATP-binding protein, putative, expressed	IMGA|Medtr1g086080.1	ABC transporter B family member chr1 22880421-22874428 E EGN_Mt100125 20111014	GO:0006869|lipid transport	GO:0000166|nucleotide binding GO:0005215|transporter activity GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity	GO:0009507|chloroplast GO:0009536|plastid
pt2_07319	A	A1S	Potri.002G212600	Potri.002G212600(AS)	POPTR_0002s22900	sp|Q9LYB9|MBD4_ARATH	Methyl-CpG-binding domain-containing protein 4 OS=Arabidopsis thaliana GN=MBD4 PE=2 SV=1	AT3G63030.1	| Symbols: MBD4 | methyl-CPG-binding domain 4 | chr3:23295394-23296425 FORWARD LENGTH=186	LOC_Os05g33550.1	protein|methyl-binding domain protein MBD, putative, expressed	IMGA|contig_190675_26.1	Methyl binding domain protein contig_190675 552-148 H PREDN 20111014	GO:0008150|biological_process	GO:0003677|DNA binding GO:0008270|zinc ion binding GO:0008327|methyl-CpG binding	GO:0005634|nucleus
pt2_07320	A	A2S	Potri.002G212500	Potri.002G212500(AS) Potri.014G137200(DS)	POPTR_0002s22910	NA	NA	AT2G48060.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: shoot, sperm cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341 proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa - 318; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). | chr2:19651560-19662386 REVERSE LENGTH=2462	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_07321	A	A1S	Potri.002G212400	Potri.002G212400(AS)	POPTR_0002s22920	sp|P33490|ABP1_TOBAC	Auxin-binding protein T85 OS=Nicotiana tabacum GN=T85 PE=3 SV=1	AT4G02980.1	| Symbols: ABP1, ABP | endoplasmic reticulum auxin binding protein 1 | chr4:1319902-1321449 REVERSE LENGTH=198	LOC_Os12g34450.1	protein|auxin-binding protein 4 precursor, putative, expressed	NA	NA	GO:0009826|unidimensional cell growth GO:0032877|positive regulation of DNA endoreduplication GO:0045793|positive regulation of cell size GO:0051781|positive regulation of cell division	GO:0004872|receptor activity GO:0010011|auxin binding	GO:0005788|endoplasmic reticulum lumen GO:0009507|chloroplast
pt2_07322	B	B9S	Potri.008G210500	Potri.008G210500(BS) Potri.008G218300(BS) Potri.008G218600(BS) Potri.008G218500(BS) Potri.008G210800(BS) Potri.008G210600(BS) Potri.008G210700(BS) Potri.008G218100(BS) Potri.008G218700(BA)	POPTR_0002s22930	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07323	A	A3S	Potri.008G218200	Potri.008G218200(AS) Potri.008G218400(AS) Potri.008G218800(BS)	POPTR_0002s22940	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07324	B	B1A	Potri.008G210400	Potri.008G210400(BA)	POPTR_0002s22950	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07325	B	B3S	Potri.001G402200	Potri.001G402200(BS) Potri.005G153700(DS) Potri.005G163200(DS)	POPTR_0002s22960	NA	NA	AT5G05800.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 881 Blast hits to 512 proteins in 30 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 38; Plants - 833; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). | chr5:1743234-1744751 REVERSE LENGTH=449	LOC_Os12g10550.1	protein|transposon protein, putative, CACTA, En/Spm sub-class, expressed	IMGA|Medtr5g054570.1	PIF-like protein chr5 21936286-21937344 H EGN_Mt100125 20111014	GO:0008150|biological_process GO:0048573|photoperiodism, flowering	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_07326	C	C1S	Potri.008G219000	Potri.008G219000(CS)	sp|Q8K370|ACD10_MOUSE	Acyl-CoA dehydrogenase family member 10 OS=Mus musculus GN=Acad10 PE=2 SV=1	AT3G06810.1	| Symbols: IBR3 | acyl-CoA dehydrogenase-related | chr3:2146534-2150654 FORWARD LENGTH=824	LOC_Os07g47820.1	protein|acyl-CoA dehydrogenase family member 10, putative, expressed	NA	NA	GO:0008152|metabolic process GO:0009610|response to symbiotic fungus GO:0048767|root hair elongation GO:0055114|oxidation-reduction process	GO:0003995|acyl-CoA dehydrogenase activity GO:0016491|oxidoreductase activity GO:0016627|oxidoreductase activity, acting on the CH-CH group of donors GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0050660|flavin adenine dinucleotide binding	NA
pt2_07327	A	A2S	Potri.008G219000	Potri.008G219000(AS) Potri.T030600(DS)	POPTR_0002s22980	sp|Q8K370|ACD10_MOUSE	Acyl-CoA dehydrogenase family member 10 OS=Mus musculus GN=Acad10 PE=2 SV=1	AT3G06810.1	| Symbols: IBR3 | acyl-CoA dehydrogenase-related | chr3:2146534-2150654 FORWARD LENGTH=824	LOC_Os07g47820.1	protein|acyl-CoA dehydrogenase family member 10, putative, expressed	NA	NA	GO:0008152|metabolic process GO:0009610|response to symbiotic fungus GO:0048767|root hair elongation GO:0055114|oxidation-reduction process	GO:0003995|acyl-CoA dehydrogenase activity GO:0016491|oxidoreductase activity GO:0016627|oxidoreductase activity, acting on the CH-CH group of donors GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0050660|flavin adenine dinucleotide binding	NA
pt2_07328	A	A1S	Potri.008G219100	Potri.008G219100(AS)	POPTR_0002s22990	sp|Q6IBW4|CNDH2_HUMAN	Condensin-2 complex subunit H2 OS=Homo sapiens GN=NCAPH2 PE=1 SV=1	AT3G16730.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Non-SMC condensin II complex, subunit H2-like (InterPro:IPR009378); Has 249 Blast hits to 211 proteins in 82 species: Archae - 0; Bacteria - 0; Metazoa - 145; Fungi - 8; Plants - 30; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). | chr3:5695633-5698863 REVERSE LENGTH=683	LOC_Os07g33360.1	protein|expressed protein	NA	NA	GO:0045739|positive regulation of DNA repair GO:2001022|positive regulation of response to DNA damage stimulus	NA	GO:0000793|condensed chromosome GO:0005634|nucleus GO:0005730|nucleolus
pt2_07329	A	A3S	Potri.008G219200	Potri.008G219200(AS) Potri.T030300(DS) Potri.010G010500(DS)	POPTR_0002s23000	sp|Q8L9T5|ATL2_ARATH	RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2 SV=2	AT3G16720.1	| Symbols: ATL2, TL2 | TOXICOS EN LEVADURA 2 | chr3:5692880-5693794 FORWARD LENGTH=304	LOC_Os06g09310.1	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr5g071930.1	RING-H2 zinc finger protein chr5 29601190-29602541 I EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0002679|respiratory burst involved in defense response GO:0002831|regulation of response to biotic stimulus GO:0006612|protein targeting to membrane GO:0006952|defense response GO:0009595|detection of biotic stimulus GO:0009611|response to wounding GO:0009612|response to mechanical stimulus GO:0009697|salicylic acid biosynthetic process GO:0009814|defense response, incompatible interaction GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0031348|negative regulation of defense response GO:0035556|intracellular signal transduction GO:0042742|defense response to bacterium GO:0043900|regulation of multi-organism process GO:0050832|defense response to fungus	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_07330	B	B2S	Potri.002G229600	Potri.002G229600(BS) Potri.002G229700(BS)	POPTR_0002s23010	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	GO:0005576|extracellular region
pt2_07331	A	A2S	Potri.002G229600	Potri.002G229600(AS) Potri.002G229700(AS)	POPTR_0002s23020	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	GO:0005576|extracellular region
pt2_07332	A	A1S	Potri.002G229800	Potri.002G229800(AS)	POPTR_0002s23040	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07333	A	A1S	Potri.002G229900	Potri.002G229900(AS)	POPTR_0002s23050	sp|Q9SDQ4|GLR37_ARATH	Glutamate receptor 3.7 OS=Arabidopsis thaliana GN=GLR3.7 PE=2 SV=2	AT2G32400.1	| Symbols: GLR5, GLR3.7, ATGLR3.7 | glutamate receptor 5 | chr2:13752665-13756233 REVERSE LENGTH=921	LOC_Os02g02540.1	protein|glutamate receptor, putative, expressed	IMGA|Medtr5g024350.1	Glutamate receptor 3.6 chr5 9542660-9547378 E EGN_Mt100125 20111014	GO:0006810|transport GO:0006874|cellular calcium ion homeostasis GO:0007186|G-protein coupled receptor signaling pathway GO:0009416|response to light stimulus	GO:0004965|G-protein coupled GABA receptor activity GO:0004970|ionotropic glutamate receptor activity GO:0005215|transporter activity GO:0005217|intracellular ligand-gated ion channel activity GO:0005234|extracellular-glutamate-gated ion channel activity GO:0005515|protein binding	GO:0005576|extracellular region GO:0009506|plasmodesma GO:0016020|membrane GO:0016021|integral to membrane
pt2_07334	A	A1S	Potri.002G230000	Potri.002G230000(AS)	POPTR_0002s23060	sp|Q8GXJ4|GLR34_ARATH	Glutamate receptor 3.4 OS=Arabidopsis thaliana GN=GLR3.4 PE=2 SV=2	AT1G05200.2	| Symbols: ATGLR3.4, GLR3.4, GLUR3 | glutamate receptor 3.4 | chr1:1505642-1509002 FORWARD LENGTH=959	LOC_Os06g46670.3	protein|glutamate receptor, putative, expressed	IMGA|Medtr5g024350.1	Glutamate receptor 3.6 chr5 9542660-9547378 E EGN_Mt100125 20111014	GO:0006816|calcium ion transport GO:0006874|cellular calcium ion homeostasis GO:0009416|response to light stimulus GO:0009611|response to wounding GO:0019722|calcium-mediated signaling GO:0030003|cellular cation homeostasis GO:0070417|cellular response to cold GO:0071230|cellular response to amino acid stimulus GO:0071260|cellular response to mechanical stimulus GO:0071311|cellular response to acetate	GO:0005217|intracellular ligand-gated ion channel activity GO:0005262|calcium channel activity GO:0005515|protein binding GO:0008066|glutamate receptor activity GO:0015276|ligand-gated ion channel activity	GO:0005576|extracellular region GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009536|plastid
pt2_07335	A	A3S	Potri.002G230100	Potri.002G230100(AS) Potri.001G452300(BS) Potri.T086400(BS)	POPTR_0002s23070	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006487|protein N-linked glycosylation GO:0006635|fatty acid beta-oxidation GO:0010413|glucuronoxylan metabolic process GO:0016558|protein import into peroxisome matrix GO:0045492|xylan biosynthetic process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_07336	A	A1S	Potri.002G230200	Potri.002G230200(AS)	POPTR_0002s23080	sp|Q94C37|HDG2_ARATH	Homeobox-leucine zipper protein HDG2 OS=Arabidopsis thaliana GN=HDG2 PE=2 SV=1	AT1G05230.4	| Symbols: HDG2 | homeodomain GLABROUS 2 | chr1:1513388-1517024 REVERSE LENGTH=721	LOC_Os04g53540.3	protein|homeobox and START domains containing protein, putative, expressed	IMGA|Medtr5g005600.1	Homeobox-leucine zipper protein ROC7 chr5 289985-293771 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0010090|trichome morphogenesis GO:0010103|stomatal complex morphogenesis	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_07337	A	A1S	Potri.002G230300	Potri.002G230300(AS)	POPTR_0002s23090	NA	NA	AT3G21710.2	| Symbols: | unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr3:7648380-7649533 FORWARD LENGTH=211	LOC_Os07g34020.1	protein|expressed protein	NA	NA	GO:0000041|transition metal ion transport GO:0006826|iron ion transport GO:0008150|biological_process GO:0010106|cellular response to iron ion starvation GO:0010167|response to nitrate GO:0010413|glucuronoxylan metabolic process GO:0015706|nitrate transport GO:0045492|xylan biosynthetic process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07338	A	A1S	Potri.002G230400	Potri.002G230400(AS)	POPTR_0002s23100	NA	NA	AT2G46150.1	| Symbols: | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | chr2:18961424-18962089 FORWARD LENGTH=221	LOC_Os07g34050.1	protein|harpin-induced protein 1 domain containing protein, expressed	IMGA|contig_54645_97.1	Plant cell wall protein SlTFR88 contig_54645 2101-1493 H PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005886|plasma membrane
pt2_07339	A	A1S	Potri.002G230500	Potri.002G230500(AS)	POPTR_0002s23110	NA	NA	AT1G65070.1	| Symbols: | DNA mismatch repair protein MutS, type 2 | chr1:24173132-24176244 REVERSE LENGTH=857	NA	NA	NA	NA	GO:0006298|mismatch repair GO:0045005|maintenance of fidelity involved in DNA-dependent DNA replication	GO:0003684|damaged DNA binding GO:0005524|ATP binding GO:0030983|mismatched DNA binding	GO:0005634|nucleus
pt2_07340	C	C1S	Potri.002G230600	Potri.002G230600(CS)	sp|Q5T1Q4|S35F1_HUMAN	Solute carrier family 35 member F1 OS=Homo sapiens GN=SLC35F1 PE=2 SV=2	AT3G59310.1	| Symbols: | Eukaryotic protein of unknown function (DUF914) | chr3:21922316-21924313 REVERSE LENGTH=332	LOC_Os05g23440.1	protein|solute carrier family 35 member F1, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_07341	A	A1S	Potri.002G230600	Potri.002G230600(AS)	POPTR_0002s23130	sp|Q5T1Q4|S35F1_HUMAN	Solute carrier family 35 member F1 OS=Homo sapiens GN=SLC35F1 PE=2 SV=2	AT3G59310.1	| Symbols: | Eukaryotic protein of unknown function (DUF914) | chr3:21922316-21924313 REVERSE LENGTH=332	LOC_Os05g23440.1	protein|solute carrier family 35 member F1, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_07342	A	A2S	Potri.002G230700	Potri.002G230700(AS) Potri.014G151700(DS)	POPTR_0002s23140	sp|Q0WMN5|Y3913_ARATH	Uncharacterized protein At3g49140 OS=Arabidopsis thaliana GN=At3g49140 PE=1 SV=2	AT3G59300.1	| Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr3:21918667-21921877 FORWARD LENGTH=459	LOC_Os01g67370.1	protein|expressed protein	IMGA|Medtr5g090150.1	hypothetical protein chr5 38230503-38224222 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_07343	A	A1S	Potri.002G230800	Potri.002G230800(AS)	POPTR_0002s23150	sp|Q8WVM7|STAG1_HUMAN	Cohesin subunit SA-1 OS=Homo sapiens GN=STAG1 PE=1 SV=3	AT2G47980.1	| Symbols: SCC3, ATSCC3 | sister-chromatid cohesion protein 3 | chr2:19631423-19636795 FORWARD LENGTH=1098	LOC_Os05g09620.1	protein|SCC3, putative, expressed	IMGA|Medtr5g092930.1	hypothetical protein chr5 39534732-39535603 H EGN_Mt100125 20111014	GO:0000003|reproduction GO:0000226|microtubule cytoskeleton organization GO:0006325|chromatin organization GO:0006396|RNA processing GO:0006635|fatty acid beta-oxidation GO:0007067|mitosis GO:0007129|synapsis GO:0007131|reciprocal meiotic recombination GO:0009630|gravitropism GO:0009887|organ morphogenesis GO:0009888|tissue development GO:0010090|trichome morphogenesis GO:0010564|regulation of cell cycle process GO:0010638|positive regulation of organelle organization GO:0016558|protein import into peroxisome matrix GO:0033044|regulation of chromosome organization GO:0051455|attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation GO:0051754|meiotic sister chromatid cohesion, centromeric	NA	GO:0005634|nucleus GO:0005694|chromosome
pt2_07344	A	A1S	Potri.002G230900	Potri.002G230900(AS)	POPTR_0002s23160	NA	NA	AT5G48040.1	| Symbols: | Ubiquitin carboxyl-terminal hydrolase family protein | chr5:19470461-19471729 FORWARD LENGTH=422	LOC_Os02g32540.1	protein|ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed	IMGA|Medtr1g072550.1	hypothetical protein chr1 18188103-18185295 E EGN_Mt100125 20111014	NA	NA	NA
pt2_07345	A	A1S	Potri.002G231000	Potri.002G231000(AS)	POPTR_0002s23170	sp|Q0QLE4|DML_EUBBA	2,3-dimethylmalate lyase OS=Eubacterium barkeri GN=Dml PE=1 SV=1	AT2G43180.1	| Symbols: | Phosphoenolpyruvate carboxylase family protein | chr2:17953719-17955774 REVERSE LENGTH=479	LOC_Os04g42580.1	protein|carboxyvinyl-carboxyphosphonate phosphorylmutase, putative, expressed	NA	NA	GO:0008152|metabolic process	GO:0003824|catalytic activity	GO:0009507|chloroplast
pt2_07346	A	A1S	Potri.002G231100	Potri.002G231100(AS)	POPTR_0002s23180	sp|Q67YI9|EPN2_ARATH	Clathrin interactor EPSIN 2 OS=Arabidopsis thaliana GN=EPSIN2 PE=1 SV=1	AT2G43160.4	| Symbols: | ENTH/VHS family protein | chr2:17948884-17952920 FORWARD LENGTH=646	LOC_Os02g56270.1	protein|ENTH domain containing protein, expressed	IMGA|Medtr1g075760.1	Epsin-2 chr1 19302561-19301051 H EGN_Mt100125 20111014	NA	NA	GO:0005634|nucleus
pt2_07347	A	A1S	Potri.002G231200	Potri.002G231200(AS)	POPTR_0002s23190	sp|Q42560|ACO1_ARATH	Aconitate hydratase 1 OS=Arabidopsis thaliana GN=ACO1 PE=1 SV=2	AT4G35830.2	| Symbols: ACO1 | aconitase 1 | chr4:16973007-16977278 REVERSE LENGTH=795	LOC_Os08g09200.1	protein|aconitate hydratase protein, putative, expressed	IMGA|Medtr5g022940.1	Aconitate hydratase chr5 8835153-8842740 F EGN_Mt100125 20111014	GO:0000302|response to reactive oxygen species GO:0006007|glucose catabolic process GO:0006096|glycolysis GO:0006101|citrate metabolic process GO:0006102|isocitrate metabolic process GO:0006833|water transport GO:0006972|hyperosmotic response GO:0007030|Golgi organization GO:0007033|vacuole organization GO:0008152|metabolic process GO:0009266|response to temperature stimulus GO:0009651|response to salt stress GO:0010039|response to iron ion GO:0015979|photosynthesis GO:0046686|response to cadmium ion GO:0055072|iron ion homeostasis	GO:0003994|aconitate hydratase activity GO:0005507|copper ion binding GO:0048027|mRNA 5'-UTR binding GO:0051539|4 iron, 4 sulfur cluster binding	GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0005773|vacuole GO:0005829|cytosol GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0048046|apoplast
pt2_07348	D	D1S	Potri.002G231300	Potri.002G231300(DS)	POPTR_0002s23200	NA	NA	AT3G59280.1	| Symbols: TXR1 | Protein Transporter, Pam16 | chr3:21909266-21910519 REVERSE LENGTH=116	LOC_Os10g33910.1	protein|mitochondrial import inner membrane translocase subunit Tim16, putative, expressed	IMGA|Medtr1g098440.1	hypothetical protein chr1 28257354-28261341 H EGN_Mt100125 20111014	GO:0006626|protein targeting to mitochondrion GO:0008150|biological_process	NA	GO:0005739|mitochondrion
pt2_07349	A	A1S	Potri.002G231400	Potri.002G231400(AS)	POPTR_0002s23210	NA	NA	NA	NA	LOC_Os12g13100.1	protein|WW domain containing protein, expressed	IMGA|Medtr5g063720.1	WW domain containing protein expressed chr5 25705188-25706170 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07350	C	C1S	Potri.002G231500	Potri.002G231500(CS)	NA	NA	AT1G05790.1	| Symbols: | lipase class 3 family protein | chr1:1733039-1737365 FORWARD LENGTH=687	LOC_Os04g41200.1	protein|lipase, putative, expressed	IMGA|Medtr1g116780.1	Sn1-specific diacylglycerol lipase chr1 34040500-34033325 F EGN_Mt100125 20111014	GO:0006629|lipid metabolic process GO:0006635|fatty acid beta-oxidation GO:0016558|protein import into peroxisome matrix	GO:0004806|triglyceride lipase activity	GO:0005886|plasma membrane
pt2_07351	A	A1S	Potri.002G231500	Potri.002G231500(AS)	POPTR_0002s23230	NA	NA	AT1G05790.1	| Symbols: | lipase class 3 family protein | chr1:1733039-1737365 FORWARD LENGTH=687	LOC_Os04g41200.1	protein|lipase, putative, expressed	IMGA|Medtr1g116780.1	Sn1-specific diacylglycerol lipase chr1 34040500-34033325 F EGN_Mt100125 20111014	GO:0006629|lipid metabolic process GO:0006635|fatty acid beta-oxidation GO:0016558|protein import into peroxisome matrix	GO:0004806|triglyceride lipase activity	GO:0005886|plasma membrane
pt2_07352	A	A1S	Potri.002G231600	Potri.002G231600(AS)	POPTR_0002s23240	sp|Q9MA46|PLA12_ARATH	Galactolipase DONGLE, chloroplastic OS=Arabidopsis thaliana GN=DGL PE=1 SV=1	AT1G05800.1	| Symbols: DGL | alpha/beta-Hydrolases superfamily protein | chr1:1741204-1742619 FORWARD LENGTH=471	LOC_Os11g19340.1	protein|lipase, putative, expressed	IMGA|contig_239396_1.1	Lipase family protein contig_239396 2101-830 H PREDN 20111014	GO:0006629|lipid metabolic process GO:0009611|response to wounding GO:0009695|jasmonic acid biosynthetic process GO:0030308|negative regulation of cell growth GO:0050832|defense response to fungus	GO:0004806|triglyceride lipase activity GO:0008970|phosphatidylcholine 1-acylhydrolase activity GO:0047714|galactolipase activity	GO:0005811|lipid particle GO:0009507|chloroplast
pt2_07353	A	A2S	Potri.002G231700	Potri.002G231700(AS) Potri.014G150600(DS)	POPTR_0002s23250	sp|Q8H102|BH128_ARATH	Transcription factor bHLH128 OS=Arabidopsis thaliana GN=BHLH128 PE=1 SV=1	AT1G05805.1	| Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr1:1744843-1747427 FORWARD LENGTH=362	LOC_Os01g67480.1	protein|helix-loop-helix DNA-binding domain containing protein, expressed	IMGA|Medtr1g105280.1	Transcription factor bHLH130 chr1 31113232-31108907 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus GO:0005829|cytosol
pt2_07354	A	A1S	Potri.002G231700	Potri.002G231700(AS)	POPTR_0002s23260	sp|Q8H102|BH128_ARATH	Transcription factor bHLH128 OS=Arabidopsis thaliana GN=BHLH128 PE=1 SV=1	AT1G05805.1	| Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr1:1744843-1747427 FORWARD LENGTH=362	LOC_Os01g67480.1	protein|helix-loop-helix DNA-binding domain containing protein, expressed	IMGA|Medtr1g105280.1	Transcription factor bHLH130 chr1 31113232-31108907 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus GO:0005829|cytosol
pt2_07355	A	A2S	Potri.002G231800	Potri.002G231800(AS) Potri.014G150300(DS)	POPTR_0002s23270	sp|Q9SIP0|RAA5D_ARATH	Ras-related protein RABA5d OS=Arabidopsis thaliana GN=RABA5D PE=2 SV=1	AT2G31680.1	| Symbols: AtRABA5d, RABA5d | RAB GTPase homolog A5D | chr2:13473781-13474957 REVERSE LENGTH=219	LOC_Os08g41340.1	protein|ras-related protein, putative, expressed	IMGA|contig_80534_1.1	Ras-related protein Rab-25 contig_80534 213-2592 E PREDN 20111014	GO:0007264|small GTPase mediated signal transduction GO:0015031|protein transport	GO:0005525|GTP binding	GO:0005794|Golgi apparatus GO:0005829|cytosol
pt2_07356	A	A1S	Potri.002G231800	Potri.002G231800(AS)	POPTR_0002s23280	sp|Q9SIP0|RAA5D_ARATH	Ras-related protein RABA5d OS=Arabidopsis thaliana GN=RABA5D PE=2 SV=1	AT2G31680.1	| Symbols: AtRABA5d, RABA5d | RAB GTPase homolog A5D | chr2:13473781-13474957 REVERSE LENGTH=219	LOC_Os08g41340.1	protein|ras-related protein, putative, expressed	IMGA|contig_80534_1.1	Ras-related protein Rab-25 contig_80534 213-2592 E PREDN 20111014	GO:0007264|small GTPase mediated signal transduction GO:0015031|protein transport	GO:0005525|GTP binding	GO:0005794|Golgi apparatus GO:0005829|cytosol
pt2_07357	B	B1S	Potri.002G231900	Potri.002G231900(BS)	POPTR_0002s23290	sp|Q9SEE4|PIRL_SOLLC	Pirin-like protein OS=Solanum lycopersicum PE=2 SV=1	AT2G43120.1	| Symbols: | RmlC-like cupins superfamily protein | chr2:17927339-17928871 FORWARD LENGTH=321	LOC_Os03g62790.2	protein|pirin, putative, expressed	IMGA|Medtr5g094250.1	Pirin-like protein chr5 40127582-40130310 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0005516|calmodulin binding	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_07358	B	B1S	Potri.002G232000	Potri.002G232000(BS)	POPTR_0002s23300	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07359	A	A1S	Potri.002G232100	Potri.002G232100(AS)	POPTR_0002s23310	sp|P54001|P4HA1_RAT	Prolyl 4-hydroxylase subunit alpha-1 OS=Rattus norvegicus GN=P4ha1 PE=2 SV=2	AT2G43080.1	| Symbols: AT-P4H-1 | P4H isoform 1 | chr2:17915755-17918599 FORWARD LENGTH=283	LOC_Os04g27850.1	protein|oxidoreductase, putative, expressed	IMGA|Medtr5g022960.1	Prolyl 4-hydroxylase alpha-2 subunit chr5 8850764-8847420 F EGN_Mt100125 20111014	GO:0006487|protein N-linked glycosylation GO:0018401|peptidyl-proline hydroxylation to 4-hydroxy-L-proline GO:0055114|oxidation-reduction process	GO:0004656|procollagen-proline 4-dioxygenase activity GO:0005506|iron ion binding GO:0016491|oxidoreductase activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors GO:0031418|L-ascorbic acid binding	GO:0005576|extracellular region GO:0005794|Golgi apparatus
pt2_07360	A	A1S	Potri.002G232200	Potri.002G232200(AS)	POPTR_0002s23320	sp|Q5F383|SPP2B_CHICK	Signal peptide peptidase-like 2B OS=Gallus gallus GN=SPPL2B PE=2 SV=1	AT2G43070.1	| Symbols: SPPL3, ATSPPL3 | SIGNAL PEPTIDE PEPTIDASE-LIKE 3 | chr2:17911233-17914776 REVERSE LENGTH=540	LOC_Os11g24540.2	protein|signal peptide peptidase-like 2B, putative, expressed	IMGA|Medtr1g116800.1	hypothetical protein chr1 34048331-34047060 H EGN_Mt100125 20111014	GO:0006508|proteolysis	GO:0004190|aspartic-type endopeptidase activity GO:0008233|peptidase activity	GO:0005768|endosome GO:0005774|vacuolar membrane
pt2_07361	A	A1S	Potri.002G232400	Potri.002G232400(AS)	POPTR_0002s23340	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07362	A	A1S	Potri.002G232500	Potri.002G232500(AS)	POPTR_0002s23350	NA	NA	NA	NA	NA	NA	NA	NA	NA	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_07363	A	A1S	Potri.002G232600	Potri.002G232600(AS)	POPTR_0002s23360	sp|Q55CX9|IPO7_DICDI	Probable importin-7 homolog OS=Dictyostelium discoideum GN=DDB_G0269860 PE=3 SV=1	AT2G31660.1	| Symbols: SAD2, URM9 | ARM repeat superfamily protein | chr2:13464519-13471353 FORWARD LENGTH=1040	LOC_Os04g26841.1	protein|importin-8, putative, expressed	NA	NA	GO:0000059|protein import into nucleus, docking GO:0006406|mRNA export from nucleus GO:0006606|protein import into nucleus GO:0009165|nucleotide biosynthetic process GO:0035280|miRNA loading onto RISC involved in gene silencing by miRNA	GO:0008565|protein transporter activity	GO:0005634|nucleus GO:0005643|nuclear pore GO:0005737|cytoplasm GO:0005829|cytosol
pt2_07364	A	A1S	Potri.002G232700	Potri.002G232700(AS)	POPTR_0002s23370	sp|O23277|PRD1_ARATH	Protein PRD1 OS=Arabidopsis thaliana GN=PRD1 PE=1 SV=3	AT4G14180.1	| Symbols: AtPRD1, PRD1 | putative recombination initiation defect 1 | chr4:8178330-8183515 FORWARD LENGTH=1268	LOC_Os04g28020.1	protein|expressed protein	NA	NA	GO:0006302|double-strand break repair GO:0006312|mitotic recombination GO:0007062|sister chromatid cohesion GO:0007129|synapsis GO:0007131|reciprocal meiotic recombination GO:0042138|meiotic DNA double-strand break formation GO:0045132|meiotic chromosome segregation GO:0051026|chiasma assembly	GO:0005515|protein binding GO:0042803|protein homodimerization activity	GO:0009507|chloroplast
pt2_07365	A	A1S	Potri.002G232800	Potri.002G232800(AS)	POPTR_0002s23380	sp|P0CB22|ATX2_ARATH	Histone-lysine N-methyltransferase ATX2 OS=Arabidopsis thaliana GN=ATX2 PE=2 SV=1	AT1G05830.2	| Symbols: ATX2 | trithorax-like protein 2 | chr1:1754452-1761225 FORWARD LENGTH=1083	LOC_Os09g04890.1	protein|histone-lysine N-methyltransferase, H3 lysine-4 specific ATX1, putative, expressed	IMGA|Medtr1g086980.1	Histone-lysine N-methyltransferase EZA1 chr1 23284211-23294141 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0051568|histone H3-K4 methylation	GO:0003677|DNA binding GO:0008270|zinc ion binding GO:0042800|histone methyltransferase activity (H3-K4 specific)	GO:0005634|nucleus
pt2_07366	A	A1S	Potri.002G232800	Potri.002G232800(AS)	POPTR_0002s23380	sp|P0CB22|ATX2_ARATH	Histone-lysine N-methyltransferase ATX2 OS=Arabidopsis thaliana GN=ATX2 PE=2 SV=1	AT1G05830.2	| Symbols: ATX2 | trithorax-like protein 2 | chr1:1754452-1761225 FORWARD LENGTH=1083	LOC_Os09g04890.1	protein|histone-lysine N-methyltransferase, H3 lysine-4 specific ATX1, putative, expressed	IMGA|Medtr1g086980.1	Histone-lysine N-methyltransferase EZA1 chr1 23284211-23294141 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0051568|histone H3-K4 methylation	GO:0003677|DNA binding GO:0008270|zinc ion binding GO:0042800|histone methyltransferase activity (H3-K4 specific)	GO:0005634|nucleus
pt2_07367	A	A1S	Potri.002G232900	Potri.002G232900(AS)	POPTR_0002s23400	sp|Q9S9K4|ASPL2_ARATH	Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana GN=At1g65240 PE=1 SV=2	AT1G05840.1	| Symbols: | Eukaryotic aspartyl protease family protein | chr1:1762843-1766150 REVERSE LENGTH=485	LOC_Os04g26834.1	protein|eukaryotic aspartyl protease domain containing protein, expressed	NA	NA	GO:0000303|response to superoxide GO:0006301|postreplication repair GO:0006499|N-terminal protein myristoylation GO:0006508|proteolysis GO:0006511|ubiquitin-dependent protein catabolic process GO:0006635|fatty acid beta-oxidation GO:0006869|lipid transport GO:0006891|intra-Golgi vesicle-mediated transport GO:0007165|signal transduction GO:0008219|cell death GO:0009755|hormone-mediated signaling pathway GO:0009863|salicylic acid mediated signaling pathway GO:0009873|ethylene mediated signaling pathway GO:0010351|lithium ion transport GO:0016558|protein import into peroxisome matrix GO:0044265|cellular macromolecule catabolic process GO:0048573|photoperiodism, flowering	GO:0004190|aspartic-type endopeptidase activity	GO:0005886|plasma membrane GO:0031225|anchored to membrane
pt2_07368	A	A1S	Potri.002G233000	Potri.002G233000(AS)	POPTR_0002s23410	sp|A8MS78|Y1583_ARATH	Uncharacterized protein At1g05835 OS=Arabidopsis thaliana GN=At1g05835 PE=2 SV=1	AT1G05835.1	| Symbols: | PHD finger protein | chr1:1762248-1762702 FORWARD LENGTH=127	NA	NA	NA	NA	NA	NA	NA
pt2_07369	A	A2S	Potri.002G233100	Potri.002G233100(AS) Potri.002G233200(DS)	POPTR_0002s23420	sp|P47082|AVT1_YEAST	Vacuolar amino acid transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AVT1 PE=1 SV=1	AT5G16740.1	| Symbols: | Transmembrane amino acid transporter family protein | chr5:5501044-5502856 REVERSE LENGTH=426	LOC_Os11g19240.1	protein|transmembrane amino acid transporter protein, putative, expressed	IMGA|Medtr1g094620.1	Amino acid transporter chr1 26818341-26822140 F EGN_Mt100125 20111014	GO:0006865|amino acid transport	GO:0015171|amino acid transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_07370	A	A3S	Potri.002G233200	Potri.002G233200(AS) Potri.002G233100(BS) Potri.014G146700(DS)	POPTR_0002s23430	sp|P47082|AVT1_YEAST	Vacuolar amino acid transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AVT1 PE=1 SV=1	AT5G16740.1	| Symbols: | Transmembrane amino acid transporter family protein | chr5:5501044-5502856 REVERSE LENGTH=426	LOC_Os11g19240.1	protein|transmembrane amino acid transporter protein, putative, expressed	IMGA|Medtr1g094620.1	Amino acid transporter chr1 26818341-26822140 F EGN_Mt100125 20111014	GO:0006865|amino acid transport	GO:0015171|amino acid transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_07371	A	A1S	Potri.002G233300	Potri.002G233300(AS)	POPTR_0002s23440	sp|Q9V3N8|THG1_DROME	Probable tRNA(His) guanylyltransferase OS=Drosophila melanogaster GN=l(2)35Bc PE=1 SV=1	AT2G32320.1	| Symbols: | tRNAHis guanylyltransferase | chr2:13727938-13731428 FORWARD LENGTH=525	LOC_Os05g45890.1	protein|tRNAHis guanylyltransferase family protein, expressed	NA	NA	GO:0006400|tRNA modification GO:0008150|biological_process	GO:0000287|magnesium ion binding GO:0003674|molecular_function GO:0008193|tRNA guanylyltransferase activity	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_07372	A	A1S	Potri.002G233400	Potri.002G233400(AS)	POPTR_0002s23450	NA	NA	AT5G16490.1	| Symbols: RIC4 | ROP-interactive CRIB motif-containing protein 4 | chr5:5384468-5385205 REVERSE LENGTH=153	LOC_Os03g63060.1	protein|P21-Rho-binding domain containing protein, putative, expressed	NA	NA	GO:0007155|cell adhesion GO:0009860|pollen tube growth GO:0010090|trichome morphogenesis GO:0010215|cellulose microfibril organization GO:0017157|regulation of exocytosis GO:0030833|regulation of actin filament polymerization GO:0045010|actin nucleation GO:0048765|root hair cell differentiation GO:0051650|establishment of vesicle localization GO:0071555|cell wall organization	GO:0005515|protein binding	GO:0005886|plasma membrane GO:0009507|chloroplast GO:0016324|apical plasma membrane
pt2_07373	A	A1S	Potri.002G233500	Potri.002G233500(AS)	POPTR_0002s23460	sp|Q9C5Z2|EIF3H_ARATH	Eukaryotic translation initiation factor 3 subunit H OS=Arabidopsis thaliana GN=TIF3H1 PE=2 SV=2	AT1G10840.1	| Symbols: TIF3H1 | translation initiation factor 3 subunit H1 | chr1:3607885-3610299 REVERSE LENGTH=337	LOC_Os04g30780.1	protein|eukaryotic translation initiation factor 3 subunit H, putative, expressed	NA	NA	GO:0006413|translational initiation GO:0009640|photomorphogenesis GO:0010388|cullin deneddylation	GO:0003743|translation initiation factor activity	GO:0005737|cytoplasm GO:0005829|cytosol GO:0005852|eukaryotic translation initiation factor 3 complex
pt2_07374	A	A1S	Potri.002G233600	Potri.002G233600(AS)	POPTR_0002s23470	sp|Q9LRT1|Y3804_ARATH	Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 OS=Arabidopsis thaliana GN=At3g28040 PE=2 SV=1	AT3G28040.1	| Symbols: | Leucine-rich receptor-like protein kinase family protein | chr3:10435139-10438268 FORWARD LENGTH=1016	LOC_Os01g72700.1	protein|expressed protein	IMGA|Medtr5g011410.1	Protein kinase like protein chr5 3025593-3022609 E EGN_Mt100125 20111014	GO:0002237|response to molecule of bacterial origin GO:0006468|protein phosphorylation GO:0007165|signal transduction GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway GO:0010103|stomatal complex morphogenesis GO:0048443|stamen development	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_07375	A	A1S	Potri.002G233700	Potri.002G233700(AS)	POPTR_0002s23480	sp|Q9Y7K5|YGI3_SCHPO	Uncharacterized WD repeat-containing protein C2A9.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC2A9.03 PE=2 SV=2	AT3G13340.2	| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr3:4332370-4334603 FORWARD LENGTH=447	LOC_Os06g07540.2	protein|WD-40 repeat family protein, putative, expressed	NA	NA	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005737|cytoplasm GO:0005834|heterotrimeric G-protein complex GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_07376	A	A1S	Potri.002G233800	Potri.002G233800(AS)	POPTR_0002s23490	sp|Q5XVJ4|FAN1_ARATH	Fanconi-associated nuclease 1 homolog OS=Arabidopsis thaliana GN=At1g48360 PE=2 SV=2	AT1G48360.2	| Symbols: | zinc ion binding;nucleic acid binding;hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides | chr1:17868661-17872946 FORWARD LENGTH=891	LOC_Os06g07490.1	protein|HIRAN domain containing protein, putative, expressed	NA	NA	NA	GO:0003676|nucleic acid binding GO:0008270|zinc ion binding GO:0016788|hydrolase activity, acting on ester bonds GO:0016818|hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	GO:0005634|nucleus
pt2_07377	A	A1S	Potri.002G233900	Potri.002G233900(AS)	POPTR_0002s23500	NA	NA	AT5G62990.1	| Symbols: emb1692 | Ubiquitin carboxyl-terminal hydrolase family protein | chr5:25277828-25279312 FORWARD LENGTH=494	LOC_Os04g24710.1	protein|ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed	IMGA|Medtr1g072550.1	hypothetical protein chr1 18188103-18185295 E EGN_Mt100125 20111014	GO:0009793|embryo development ending in seed dormancy	NA	GO:0005634|nucleus
pt2_07378	B	B2S	Potri.002G234000	Potri.002G234000(BS) Potri.002G234200(BS)	POPTR_0002s23510	sp|Q7XT99|AKR2_ORYSJ	Probable aldo-keto reductase 2 OS=Oryza sativa subsp. japonica GN=Os04g0338000 PE=2 SV=2	AT1G60690.1	| Symbols: | NAD(P)-linked oxidoreductase superfamily protein | chr1:22349892-22351668 REVERSE LENGTH=345	LOC_Os04g26910.1	protein|oxidoreductase, aldo/keto reductase family protein, putative, expressed	NA	NA	GO:0006094|gluconeogenesis GO:0006096|glycolysis GO:0009611|response to wounding GO:0009651|response to salt stress GO:0009805|coumarin biosynthetic process GO:0009963|positive regulation of flavonoid biosynthetic process GO:0046686|response to cadmium ion GO:0055114|oxidation-reduction process	GO:0004033|aldo-keto reductase (NADP) activity GO:0016491|oxidoreductase activity	GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane GO:0009941|chloroplast envelope
pt2_07379	D	D1S	Potri.014G147700	Potri.014G147700(DS)	POPTR_0002s23520	sp|Q7XT99|AKR2_ORYSJ	Probable aldo-keto reductase 2 OS=Oryza sativa subsp. japonica GN=Os04g0338000 PE=2 SV=2	AT1G60710.1	| Symbols: ATB2 | NAD(P)-linked oxidoreductase superfamily protein | chr1:22355073-22356627 REVERSE LENGTH=345	LOC_Os04g26910.1	protein|oxidoreductase, aldo/keto reductase family protein, putative, expressed	NA	NA	GO:0006094|gluconeogenesis GO:0006096|glycolysis GO:0009611|response to wounding GO:0009651|response to salt stress GO:0009805|coumarin biosynthetic process GO:0009963|positive regulation of flavonoid biosynthetic process GO:0046686|response to cadmium ion GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_07380	A	A2S	Potri.T131700	Potri.T131700(AS) Potri.002G234300(AS)	POPTR_0002s23530	sp|Q7XT99|AKR2_ORYSJ	Probable aldo-keto reductase 2 OS=Oryza sativa subsp. japonica GN=Os04g0338000 PE=2 SV=2	AT1G60710.1	| Symbols: ATB2 | NAD(P)-linked oxidoreductase superfamily protein | chr1:22355073-22356627 REVERSE LENGTH=345	LOC_Os04g26910.1	protein|oxidoreductase, aldo/keto reductase family protein, putative, expressed	NA	NA	GO:0006094|gluconeogenesis GO:0006096|glycolysis GO:0009611|response to wounding GO:0009651|response to salt stress GO:0009805|coumarin biosynthetic process GO:0009963|positive regulation of flavonoid biosynthetic process GO:0046686|response to cadmium ion GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_07381	A	A1S	Potri.002G234400	Potri.002G234400(AS)	POPTR_0002s23540	sp|Q8L4R0|TGD1_ARATH	Protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic OS=Arabidopsis thaliana GN=TGD1 PE=1 SV=1	AT1G19800.1	| Symbols: TGD1 | trigalactosyldiacylglycerol 1 | chr1:6846812-6847954 FORWARD LENGTH=350	NA	NA	NA	NA	GO:0006869|lipid transport GO:0019243|methylglyoxal catabolic process to D-lactate	GO:0005319|lipid transporter activity	GO:0009507|chloroplast GO:0009706|chloroplast inner membrane GO:0009707|chloroplast outer membrane GO:0009941|chloroplast envelope
pt2_07382	A	A1S	Potri.002G234500	Potri.002G234500(AS)	POPTR_0002s23550	sp|Q6ZY51|PWD_ARATH	Phosphoglucan, water dikinase, chloroplastic OS=Arabidopsis thaliana GN=GWD3 PE=1 SV=1	AT5G26570.1	| Symbols: PWD, OK1, ATGWD3 | catalytics;carbohydrate kinases;phosphoglucan, water dikinases | chr5:9261580-9267526 FORWARD LENGTH=1196	LOC_Os12g20150.1	protein|phosphoglucan, water dikinase, chloroplast precursor, putative, expressed	NA	NA	GO:0000272|polysaccharide catabolic process GO:0005975|carbohydrate metabolic process GO:0005982|starch metabolic process GO:0005983|starch catabolic process GO:0009664|plant-type cell wall organization GO:0016310|phosphorylation GO:0019252|starch biosynthetic process GO:0046777|protein autophosphorylation	GO:0003824|catalytic activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0019200|carbohydrate kinase activity GO:0030246|carbohydrate binding GO:0051752|phosphoglucan, water dikinase activity GO:2001070|starch binding	GO:0009507|chloroplast GO:0009536|plastid GO:0009570|chloroplast stroma
pt2_07383	A	A1S	Potri.002G234600	Potri.002G234600(AS)	POPTR_0002s23560	sp|Q9SFC6|GDIR_ARATH	Rho GDP-dissociation inhibitor 1 OS=Arabidopsis thaliana GN=GDI1 PE=1 SV=1	AT3G07880.1	| Symbols: SCN1 | Immunoglobulin E-set superfamily protein | chr3:2514175-2515544 FORWARD LENGTH=240	LOC_Os01g68540.1	protein|rho GDP-dissociation inhibitor 1, putative, expressed	NA	NA	GO:0007015|actin filament organization GO:0009932|cell tip growth GO:0010053|root epidermal cell differentiation	GO:0005094|Rho GDP-dissociation inhibitor activity GO:0005515|protein binding	GO:0005737|cytoplasm
pt2_07384	A	A1S	Potri.002G234700	Potri.002G234700(AS)	POPTR_0002s23570	sp|Q8L612|MACP1_ARATH	MACPF domain-containing protein At1g14780 OS=Arabidopsis thaliana GN=At1g14780 PE=2 SV=1	AT1G14780.1	| Symbols: | MAC/Perforin domain-containing protein | chr1:5091020-5093873 FORWARD LENGTH=627	LOC_Os02g27480.1	protein|membrane attack complex component/perforin/complement C9, putative, expressed	NA	NA	GO:0008150|biological_process GO:0015824|proline transport	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07385	A	A1S	Potri.002G234800	Potri.002G234800(AS)	POPTR_0002s23590	sp|O80765|PANK1_ARATH	Pantothenate kinase 1 OS=Arabidopsis thaliana GN=COAA PE=2 SV=2	AT1G60440.1	| Symbols: ATCOAA, ATPANK1, PANK1 | pantothenate kinase 1 | chr1:22266653-22269070 REVERSE LENGTH=383	LOC_Os09g36270.1	protein|pantothenate kinase, putative, expressed	NA	NA	GO:0006085|acetyl-CoA biosynthetic process GO:0015937|coenzyme A biosynthetic process	GO:0004594|pantothenate kinase activity GO:0005524|ATP binding	GO:0005737|cytoplasm
pt2_07386	A	A1S	Potri.002G234900	Potri.002G234900(AS)	POPTR_0002s23600	NA	NA	AT1G05510.1	| Symbols: | Protein of unknown function (DUF1264) | chr1:1629527-1630690 FORWARD LENGTH=241	LOC_Os05g49440.2	protein|DUF1264 domain containing protein, putative, expressed	NA	NA	GO:0009737|response to abscisic acid stimulus	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_07387	A	A1S	Potri.002G235000	Potri.002G235000(AS)	POPTR_0002s23610	sp|Q91VC0|DCTP1_RAT	dCTP pyrophosphatase 1 OS=Rattus norvegicus GN=Dctpp1 PE=2 SV=1	AT3G25400.1	| Symbols: | CONTAINS InterPro DOMAIN/s: NTP Pyrophosphohydrolase MazG-related, RS21-C6 (InterPro:IPR011394), EAR (InterPro:IPR009039), NTP pyrophosphohydrolase MazG, putative catalytic core (InterPro:IPR004518); Has 1123 Blast hits to 1121 proteins in 452 species: Archae - 22; Bacteria - 753; Metazoa - 81; Fungi - 3; Plants - 83; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). | chr3:9213236-9214144 FORWARD LENGTH=141	LOC_Os02g27810.1	protein|MazG nucleotide pyrophosphohydrolase domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_07388	A	A1S	Potri.002G235100	Potri.002G235100(AS)	POPTR_0002s23620	NA	NA	AT4G29400.1	| Symbols: | Protein of unknown function (DUF3531) | chr4:14466350-14467980 FORWARD LENGTH=302	LOC_Os01g37820.1	protein|oxidoreductase/ transition metal ion binding protein, putative, expressed	NA	NA	GO:0008150|biological_process	NA	NA
pt2_07389	A	A1S	Potri.002G235200	Potri.002G235200(AS)	POPTR_0002s23630	sp|Q07356|PDS_ARATH	15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Arabidopsis thaliana GN=PDS PE=1 SV=1	AT4G14210.1	| Symbols: PDS3, PDS, PDE226 | phytoene desaturase 3 | chr4:8190426-8194769 REVERSE LENGTH=566	LOC_Os03g08570.1	protein|amine oxidase, flavin-containing, domain containing protein, expressed	IMGA|Medtr5g042250.1	Phytoene desaturase chr5 18160697-18169004 E EGN_Mt100125 20111014	GO:0010155|regulation of proton transport GO:0016117|carotenoid biosynthetic process GO:0016120|carotene biosynthetic process GO:0046777|protein autophosphorylation GO:0055114|oxidation-reduction process	GO:0016166|phytoene dehydrogenase activity GO:0016491|oxidoreductase activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009536|plastid GO:0009941|chloroplast envelope
pt2_07390	A	A1S	Potri.002G235300	Potri.002G235300(AS)	POPTR_0002s23640	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07391	A	A1S	Potri.002G235400	Potri.002G235400(AS)	POPTR_0002s23650	sp|Q9LK48|BH077_ARATH	Transcription factor bHLH77 OS=Arabidopsis thaliana GN=BHLH77 PE=2 SV=1	AT3G23690.1	| Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr3:8528933-8530655 REVERSE LENGTH=371	LOC_Os01g68700.2	protein|BHLH transcription factor, putative, expressed	IMGA|contig_61564_1.1	BHLH transcription factor contig_61564 6268-1844 E PREDN 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0016132|brassinosteroid biosynthetic process	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_07392	A	A1S	Potri.002G235500	Potri.002G235500(AS)	POPTR_0002s23660	sp|Q9GYZ0|KIF15_STRPU	Kinesin-like protein KIF15 OS=Strongylocentrotus purpuratus GN=KIF15 PE=1 SV=1	AT3G23670.1	| Symbols: PAKRP1L, KINESIN-12B | phragmoplast-associated kinesin-related protein, putative | chr3:8519290-8525055 FORWARD LENGTH=1313	LOC_Os03g39020.1	protein|Kinesin motor domain domain containing protein, expressed	IMGA|Medtr5g094310.1	Kinesin-like protein KIF15 chr5 40170468-40164914 E EGN_Mt100125 20111014	GO:0000914|phragmoplast assembly GO:0048451|petal formation GO:0048453|sepal formation GO:0055046|microgametogenesis GO:0080175|phragmoplast microtubule organization	GO:0003777|microtubule motor activity GO:0005515|protein binding GO:0008574|plus-end-directed microtubule motor activity	GO:0009524|phragmoplast
pt2_07393	A	A1S	Potri.002G235700	Potri.002G235700(AS)	POPTR_0002s23680	sp|P31828|PQQL_ECOLI	Probable zinc protease pqqL OS=Escherichia coli (strain K12) GN=pqqL PE=3 SV=2	AT5G42390.1	| Symbols: | Insulinase (Peptidase family M16) family protein | chr5:16945308-16952647 FORWARD LENGTH=1265	LOC_Os06g41990.1	protein|M16 domain containing zinc peptidase, putative, expressed	IMGA|Medtr5g007380.1	Metalloendopeptidase chr5 1099751-1086944 E EGN_Mt100125 20111014	GO:0006508|proteolysis GO:0009793|embryo development ending in seed dormancy	GO:0003824|catalytic activity GO:0004222|metalloendopeptidase activity GO:0008270|zinc ion binding GO:0046872|metal ion binding	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_07394	A	A1S	Potri.002G235800	Potri.002G235800(AS)	POPTR_0002s23690	sp|Q8L5T9|CYT2_ARATH	Cysteine proteinase inhibitor 2 OS=Arabidopsis thaliana GN=CYS2 PE=2 SV=2	AT2G31980.1	| Symbols: AtCYS2, CYS2 | PHYTOCYSTATIN 2 | chr2:13609246-13609770 REVERSE LENGTH=147	LOC_Os04g28250.1	protein|cysteine proteinase inhibitor precursor, putative, expressed	NA	NA	GO:0009062|fatty acid catabolic process GO:0010162|seed dormancy process	GO:0004869|cysteine-type endopeptidase inhibitor activity	GO:0005576|extracellular region
pt2_07395	A	A2S	Potri.002G235900	Potri.002G235900(AS) Potri.014G146200(DS)	POPTR_0002s23700	NA	NA	AT4G14200.1	| Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr4:8185524-8188667 REVERSE LENGTH=784	NA	NA	NA	NA	GO:0006275|regulation of DNA replication GO:0006346|methylation-dependent chromatin silencing GO:0008150|biological_process GO:0009855|determination of bilateral symmetry GO:0009944|polarity specification of adaxial/abaxial axis GO:0009965|leaf morphogenesis GO:0010014|meristem initiation GO:0010051|xylem and phloem pattern formation GO:0010073|meristem maintenance GO:0010389|regulation of G2/M transition of mitotic cell cycle GO:0016246|RNA interference GO:0031048|chromatin silencing by small RNA GO:0048451|petal formation GO:0048453|sepal formation GO:0051567|histone H3-K9 methylation	NA	GO:0005634|nucleus
pt2_07396	A	A1S	Potri.002G236000	Potri.002G236000(AS)	POPTR_0002s23710	sp|F4J469|TI22L_ARATH	Protein TIC 22-like, chloroplastic OS=Arabidopsis thaliana GN=TIC22L PE=3 SV=1	AT3G23710.1	| Symbols: | Tic22-like family protein | chr3:8534061-8536148 FORWARD LENGTH=313	LOC_Os07g19030.1	protein|tic22-like family domain containing protein, expressed	NA	NA	NA	NA	GO:0009507|chloroplast GO:0009536|plastid GO:0009706|chloroplast inner membrane
pt2_07397	A	A1S	Potri.002G236100	Potri.002G236100(AS)	POPTR_0002s23720	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07398	A	A1S	Potri.002G236200	Potri.002G236200(AS)	POPTR_0002s23730	sp|P35694|BRU1_SOYBN	Brassinosteroid-regulated protein BRU1 OS=Glycine max PE=2 SV=1	AT3G23730.1	| Symbols: XTH16 | xyloglucan endotransglucosylase/hydrolase 16 | chr3:8550222-8551248 FORWARD LENGTH=291	LOC_Os06g48200.1	protein|glycosyl hydrolases family 16, putative, expressed	IMGA|Medtr5g091730.1	Xyloglucan endotransglucosylase/hydrolase chr5 38992618-38991125 E EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0006073|cellular glucan metabolic process	GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0016762|xyloglucan:xyloglucosyl transferase activity GO:0016798|hydrolase activity, acting on glycosyl bonds	GO:0005576|extracellular region GO:0005618|cell wall GO:0048046|apoplast
pt2_07399	A	A1A	Potri.002G236300	Potri.002G236300(AA)	POPTR_0002s23740	NA	NA	AT3G23740.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14120.1); Has 155 Blast hits to 130 proteins in 48 species: Archae - 0; Bacteria - 16; Metazoa - 19; Fungi - 48; Plants - 47; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). | chr3:8552077-8554730 REVERSE LENGTH=566	LOC_Os01g01170.1	protein|expressed protein	NA	NA	GO:0006260|DNA replication GO:0006270|DNA replication initiation GO:0006275|regulation of DNA replication GO:0006306|DNA methylation GO:0008150|biological_process GO:0008283|cell proliferation GO:0051567|histone H3-K9 methylation GO:0051726|regulation of cell cycle	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_07400	A	A1S	Potri.002G236300	Potri.002G236300(AS)	POPTR_0002s23750	NA	NA	AT3G23740.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14120.1); Has 155 Blast hits to 130 proteins in 48 species: Archae - 0; Bacteria - 16; Metazoa - 19; Fungi - 48; Plants - 47; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). | chr3:8552077-8554730 REVERSE LENGTH=566	LOC_Os01g01170.1	protein|expressed protein	NA	NA	GO:0006260|DNA replication GO:0006270|DNA replication initiation GO:0006275|regulation of DNA replication GO:0006306|DNA methylation GO:0008150|biological_process GO:0008283|cell proliferation GO:0051567|histone H3-K9 methylation GO:0051726|regulation of cell cycle	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_07401	A	A1S	Potri.002G236400	Potri.002G236400(AS)	POPTR_0002s23760	sp|O23406|U75D1_ARATH	UDP-glycosyltransferase 75D1 OS=Arabidopsis thaliana GN=UGT75D1 PE=2 SV=2	AT4G15550.1	| Symbols: IAGLU | indole-3-acetate beta-D-glucosyltransferase | chr4:8877877-8879301 REVERSE LENGTH=474	LOC_Os01g08440.1	protein|UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed	IMGA|Medtr5g035580.1	N-hydroxythioamide S-beta-glucosyltransferase chr5 15049155-15047304 E EGN_Mt100125 20111014	GO:0008152|metabolic process GO:0046482|para-aminobenzoic acid metabolic process	GO:0008194|UDP-glycosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups	GO:0005737|cytoplasm
pt2_07402	B	B1S	Potri.002G236400	Potri.002G236400(BS)	POPTR_0002s23770	sp|O23406|U75D1_ARATH	UDP-glycosyltransferase 75D1 OS=Arabidopsis thaliana GN=UGT75D1 PE=2 SV=2	AT4G15550.1	| Symbols: IAGLU | indole-3-acetate beta-D-glucosyltransferase | chr4:8877877-8879301 REVERSE LENGTH=474	LOC_Os01g08440.1	protein|UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed	IMGA|Medtr5g035580.1	N-hydroxythioamide S-beta-glucosyltransferase chr5 15049155-15047304 E EGN_Mt100125 20111014	GO:0008152|metabolic process GO:0046482|para-aminobenzoic acid metabolic process	GO:0008194|UDP-glycosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups	GO:0005737|cytoplasm
pt2_07403	A	A2S	Potri.002G236600	Potri.002G236600(AS) Potri.014G145900(DS)	POPTR_0002s23780	NA	NA	AT1G12850.1	| Symbols: | Phosphoglycerate mutase family protein | chr1:4380022-4381577 REVERSE LENGTH=405	LOC_Os11g31880.1	protein|phosphoglycerate mutase, putative, expressed	NA	NA	GO:0006499|N-terminal protein myristoylation GO:0008152|metabolic process GO:0009451|RNA modification	GO:0003824|catalytic activity	GO:0005634|nucleus GO:0005739|mitochondrion GO:0005829|cytosol
pt2_07404	A	A1S	Potri.002G236700	Potri.002G236700(AS)	POPTR_0002s23790	sp|Q7FAE1|MOMAS_ORYSJ	Momilactone A synthase OS=Oryza sativa subsp. japonica GN=Os04g0179200 PE=2 SV=1	AT3G26770.1	| Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr3:9845494-9847079 FORWARD LENGTH=306	LOC_Os11g32030.1	protein|sex determination protein tasselseed-2, putative, expressed	NA	NA	GO:0008152|metabolic process GO:0010089|xylem development GO:0044036|cell wall macromolecule metabolic process	GO:0000166|nucleotide binding GO:0016491|oxidoreductase activity	NA
pt2_07405	A	A1S	Potri.002G236800	Potri.002G236800(AS)	POPTR_0002s23800	sp|Q9S702|AK3_ARATH	Aspartokinase 3, chloroplastic OS=Arabidopsis thaliana GN=AK3 PE=1 SV=1	AT3G02020.1	| Symbols: AK3 | aspartate kinase 3 | chr3:340739-343410 REVERSE LENGTH=559	LOC_Os07g20544.1	protein|aspartokinase, chloroplast precursor, putative, expressed	NA	NA	GO:0008152|metabolic process GO:0008652|cellular amino acid biosynthetic process GO:0009067|aspartate family amino acid biosynthetic process	GO:0004072|aspartate kinase activity GO:0016597|amino acid binding	GO:0009507|chloroplast
pt2_07406	A	A1S	Potri.002G237000	Potri.002G237000(AS)	POPTR_0002s23810	NA	NA	AT2G31410.1	| Symbols: | unknown protein; Has 1719 Blast hits to 1091 proteins in 184 species: Archae - 5; Bacteria - 24; Metazoa - 559; Fungi - 169; Plants - 192; Viruses - 1; Other Eukaryotes - 769 (source: NCBI BLink). | chr2:13392220-13392819 REVERSE LENGTH=199	LOC_Os02g38190.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07407	A	A1S	Potri.002G237100	Potri.002G237100(AS)	POPTR_0002s23820	sp|Q9S7F4|PP206_ARATH	Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1	AT3G02010.1	| Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr3:337965-340442 FORWARD LENGTH=825	LOC_Os01g01115.1	protein|pentatricopeptide, putative, expressed	IMGA|Medtr5g095690.1	Pentatricopeptide repeat-containing protein chr5 40792756-40789774 H EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005739|mitochondrion
pt2_07408	A	A1S	Potri.002G237200	Potri.002G237200(AS)	POPTR_0002s23830	NA	NA	AT5G13890.3	| Symbols: | Family of unknown function (DUF716) | chr5:4479940-4480872 REVERSE LENGTH=310	LOC_Os11g32950.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_07409	A	A2S	Potri.002G237400	Potri.002G237400(AS) Potri.014G145000(DS)	POPTR_0002s23840	sp|Q55750|MFD_SYNY3	Transcription-repair-coupling factor OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=mfd PE=3 SV=1	AT3G02060.1	| Symbols: | DEAD/DEAH box helicase, putative | chr3:354409-358319 FORWARD LENGTH=823	LOC_Os11g32880.1	protein|DEAD-box ATP-dependent RNA helicase, putative, expressed	IMGA|Medtr1g031120.1	ATP-dependent DNA helicase recG chr1 9114003-9108197 E EGN_Mt100125 20111014	GO:0006281|DNA repair GO:0006783|heme biosynthetic process	GO:0003676|nucleic acid binding GO:0003684|damaged DNA binding GO:0004386|helicase activity GO:0005524|ATP binding GO:0008026|ATP-dependent helicase activity	GO:0005634|nucleus
pt2_07410	G	G1	NA	NA	POPTR_0002s23840	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07411	A	A1S	Potri.002G237400	Potri.002G237400(AS)	POPTR_0002s23840	sp|Q55750|MFD_SYNY3	Transcription-repair-coupling factor OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=mfd PE=3 SV=1	AT3G02060.1	| Symbols: | DEAD/DEAH box helicase, putative | chr3:354409-358319 FORWARD LENGTH=823	LOC_Os11g32880.1	protein|DEAD-box ATP-dependent RNA helicase, putative, expressed	IMGA|Medtr1g031120.1	ATP-dependent DNA helicase recG chr1 9114003-9108197 E EGN_Mt100125 20111014	GO:0006281|DNA repair GO:0006783|heme biosynthetic process	GO:0003676|nucleic acid binding GO:0003684|damaged DNA binding GO:0004386|helicase activity GO:0005524|ATP binding GO:0008026|ATP-dependent helicase activity	GO:0005634|nucleus
pt2_07412	A	A1S	Potri.002G237500	Potri.002G237500(AS)	POPTR_0002s23850	sp|Q9LD18|POT4_ARATH	Potassium transporter 4 OS=Arabidopsis thaliana GN=POT4 PE=1 SV=2	AT3G02050.1	| Symbols: KUP3, ATKUP3, ATKT4 | K+ uptake transporter 3 | chr3:350815-354135 FORWARD LENGTH=789	LOC_Os07g47350.1	protein|potassium transporter, putative, expressed	IMGA|Medtr5g071860.1	Potassium transporter chr5 29568951-29563893 E EGN_Mt100125 20111014	GO:0006813|potassium ion transport GO:0009605|response to external stimulus GO:0016036|cellular response to phosphate starvation GO:0019375|galactolipid biosynthetic process GO:0019761|glucosinolate biosynthetic process GO:0071805|potassium ion transmembrane transport	GO:0015079|potassium ion transmembrane transporter activity	GO:0009507|chloroplast GO:0016020|membrane
pt2_07413	A	A1S	Potri.002G237600	Potri.002G237600(AS)	POPTR_0002s23860	sp|Q9SA72|Y1357_ARATH	Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1	AT3G26700.1	| Symbols: | Protein kinase superfamily protein | chr3:9810669-9812356 FORWARD LENGTH=380	LOC_Os01g70410.3	protein|protein kinase, putative, expressed	IMGA|Medtr5g023980.1	Serine/threonine protein kinase chr5 9330172-9322089 F EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_07414	A	A1S	Potri.002G237700	Potri.002G237700(AS)	POPTR_0002s23870	NA	NA	AT3G19340.1	| Symbols: | Protein of unknown function (DUF3754) | chr3:6701387-6704071 REVERSE LENGTH=487	LOC_Os12g29550.1	protein|expressed protein	NA	NA	NA	NA	GO:0005783|endoplasmic reticulum GO:0005886|plasma membrane
pt2_07415	A	A1S	Potri.002G237800	Potri.002G237800(AS)	POPTR_0002s23880	NA	NA	AT5G13950.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02290.1); Has 147 Blast hits to 145 proteins in 44 species: Archae - 0; Bacteria - 2; Metazoa - 56; Fungi - 6; Plants - 81; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr5:4496196-4500206 REVERSE LENGTH=939	LOC_Os07g27760.4	protein|expressed protein	IMGA|contig_51676_1.1	Unknown protein contig_51676 2357-9275 E PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07416	A	A2S	Potri.002G237900	Potri.002G237900(AS) Potri.014G143900(DS)	POPTR_0002s23890	sp|Q8GZB6|SUVH4_ARATH	Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 OS=Arabidopsis thaliana GN=SUVH4 PE=1 SV=2	AT5G13960.1	| Symbols: SUVH4, KYP, SDG33 | SU(VAR)3-9 homolog 4 | chr5:4501688-4505979 FORWARD LENGTH=624	LOC_Os01g70220.1	protein|histone-lysine N-methyltransferase, putative, expressed	IMGA|Medtr5g013420.1	"Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6" chr5 4000445-4004388 E EGN_Mt100125 20111014	GO:0000226|microtubule cytoskeleton organization GO:0006260|DNA replication GO:0006270|DNA replication initiation GO:0006275|regulation of DNA replication GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0006346|methylation-dependent chromatin silencing GO:0007267|cell-cell signaling GO:0008283|cell proliferation GO:0009616|virus induced gene silencing GO:0009640|photomorphogenesis GO:0009855|determination of bilateral symmetry GO:0010014|meristem initiation GO:0010073|meristem maintenance GO:0010216|maintenance of DNA methylation GO:0010267|production of ta-siRNAs involved in RNA interference GO:0010388|cullin deneddylation GO:0016567|protein ubiquitination GO:0016571|histone methylation GO:0016572|histone phosphorylation GO:0016579|protein deubiquitination GO:0018022|peptidyl-lysine methylation GO:0031047|gene silencing by RNA GO:0031048|chromatin silencing by small RNA GO:0034968|histone lysine methylation GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0045893|positive regulation of transcription, DNA-dependent GO:0051567|histone H3-K9 methylation GO:0051726|regulation of cell cycle	GO:0008270|zinc ion binding GO:0008327|methyl-CpG binding GO:0010385|double-stranded methylated DNA binding GO:0010428|methyl-CpNpG binding GO:0010429|methyl-CpNpN binding GO:0018024|histone-lysine N-methyltransferase activity GO:0042393|histone binding GO:0046974|histone methyltransferase activity (H3-K9 specific)	GO:0005634|nucleus
pt2_07417	A	A1S	Potri.002G238000	Potri.002G238000(AS)	POPTR_0002s23900	sp|Q8GZB6|SUVH4_ARATH	Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 OS=Arabidopsis thaliana GN=SUVH4 PE=1 SV=2	AT5G13960.1	| Symbols: SUVH4, KYP, SDG33 | SU(VAR)3-9 homolog 4 | chr5:4501688-4505979 FORWARD LENGTH=624	LOC_Os01g70220.1	protein|histone-lysine N-methyltransferase, putative, expressed	IMGA|Medtr5g013420.1	"Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6" chr5 4000445-4004388 E EGN_Mt100125 20111014	GO:0000226|microtubule cytoskeleton organization GO:0006260|DNA replication GO:0006270|DNA replication initiation GO:0006275|regulation of DNA replication GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0006346|methylation-dependent chromatin silencing GO:0007267|cell-cell signaling GO:0008283|cell proliferation GO:0009616|virus induced gene silencing GO:0009640|photomorphogenesis GO:0009855|determination of bilateral symmetry GO:0010014|meristem initiation GO:0010073|meristem maintenance GO:0010216|maintenance of DNA methylation GO:0010267|production of ta-siRNAs involved in RNA interference GO:0010388|cullin deneddylation GO:0016567|protein ubiquitination GO:0016571|histone methylation GO:0016572|histone phosphorylation GO:0016579|protein deubiquitination GO:0018022|peptidyl-lysine methylation GO:0031047|gene silencing by RNA GO:0031048|chromatin silencing by small RNA GO:0034968|histone lysine methylation GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0045893|positive regulation of transcription, DNA-dependent GO:0051567|histone H3-K9 methylation GO:0051726|regulation of cell cycle	GO:0008270|zinc ion binding GO:0008327|methyl-CpG binding GO:0010385|double-stranded methylated DNA binding GO:0010428|methyl-CpNpG binding GO:0010429|methyl-CpNpN binding GO:0018024|histone-lysine N-methyltransferase activity GO:0042393|histone binding GO:0046974|histone methyltransferase activity (H3-K9 specific)	GO:0005634|nucleus
pt2_07418	A	A1S	Potri.002G238100	Potri.002G238100(AS)	POPTR_0002s23910	NA	NA	AT5G13970.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:4506383-4507804 REVERSE LENGTH=404	LOC_Os04g32580.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_07419	A	A1S	Potri.002G238200	Potri.002G238200(AS)	POPTR_0002s23920	sp|Q60HE9|MA2B1_MACFA	Lysosomal alpha-mannosidase OS=Macaca fascicularis GN=MAN2B1 PE=2 SV=1	AT3G26720.1	| Symbols: | Glycosyl hydrolase family 38 protein | chr3:9816707-9823056 FORWARD LENGTH=1019	LOC_Os11g32260.1	protein|lysosomal alpha-mannosidase precursor, putative, expressed	NA	NA	GO:0005975|carbohydrate metabolic process GO:0006013|mannose metabolic process GO:0007155|cell adhesion GO:0010048|vernalization response GO:0010090|trichome morphogenesis GO:0045010|actin nucleation GO:0048765|root hair cell differentiation GO:0071555|cell wall organization	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0004559|alpha-mannosidase activity GO:0008270|zinc ion binding GO:0015923|mannosidase activity GO:0030246|carbohydrate binding	GO:0005576|extracellular region GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0009505|plant-type cell wall GO:0009507|chloroplast
pt2_07420	A	A1S	Potri.002G238300	Potri.002G238300(AS)	POPTR_0002s23930	sp|Q9LVM5|TTHL_ARATH	Uric acid degradation bifunctional protein TTL OS=Arabidopsis thaliana GN=TTL PE=1 SV=1	AT5G58220.1	| Symbols: TTL | transthyretin-like protein | chr5:23554546-23555861 REVERSE LENGTH=324	LOC_Os03g27320.1	protein|steroid binding protein, putative, expressed	NA	NA	GO:0001560|regulation of cell growth by extracellular stimulus GO:0006499|N-terminal protein myristoylation GO:0006810|transport GO:0009627|systemic acquired resistance GO:0009742|brassinosteroid mediated signaling pathway GO:0019428|allantoin biosynthetic process GO:0031347|regulation of defense response GO:0051289|protein homotetramerization	GO:0005515|protein binding GO:0033971|hydroxyisourate hydrolase activity GO:0051997|2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase activity	GO:0005576|extracellular region GO:0005777|peroxisome GO:0005829|cytosol GO:0031234|extrinsic to internal side of plasma membrane
pt2_07421	A	A1S	Potri.002G238300	Potri.002G238300(AS)	POPTR_0002s23930	sp|Q9LVM5|TTHL_ARATH	Uric acid degradation bifunctional protein TTL OS=Arabidopsis thaliana GN=TTL PE=1 SV=1	AT5G58220.1	| Symbols: TTL | transthyretin-like protein | chr5:23554546-23555861 REVERSE LENGTH=324	LOC_Os03g27320.1	protein|steroid binding protein, putative, expressed	NA	NA	GO:0001560|regulation of cell growth by extracellular stimulus GO:0006499|N-terminal protein myristoylation GO:0006810|transport GO:0009627|systemic acquired resistance GO:0009742|brassinosteroid mediated signaling pathway GO:0019428|allantoin biosynthetic process GO:0031347|regulation of defense response GO:0051289|protein homotetramerization	GO:0005515|protein binding GO:0033971|hydroxyisourate hydrolase activity GO:0051997|2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase activity	GO:0005576|extracellular region GO:0005777|peroxisome GO:0005829|cytosol GO:0031234|extrinsic to internal side of plasma membrane
pt2_07422	A	A1S	Potri.002G238400	Potri.002G238400(AS)	POPTR_0002s23940	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07423	C	C1S	Potri.002G238500	Potri.002G238500(CS)	sp|Q4PE39|SEC23_USTMA	Protein transport protein SEC23 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=SEC23 PE=3 SV=1	AT2G21630.1	| Symbols: | Sec23/Sec24 protein transport family protein | chr2:9250346-9253829 FORWARD LENGTH=761	LOC_Os08g36994.1	protein|protein transport protein, putative, expressed	NA	NA	GO:0006810|transport GO:0006886|intracellular protein transport GO:0006888|ER to Golgi vesicle-mediated transport	GO:0005215|transporter activity GO:0008270|zinc ion binding	GO:0005737|cytoplasm GO:0030127|COPII vesicle coat
pt2_07424	G	G2	NA	NA	POPTR_0002s23955	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07425	B	B1S	Potri.002G238600	Potri.002G238600(BS)	POPTR_0002s23960	sp|Q5B4C9|ATG26_EMENI	Sterol 3-beta-glucosyltransferase OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=atg26 PE=3 SV=1	AT3G07020.1	| Symbols: | UDP-Glycosyltransferase superfamily protein | chr3:2217841-2221590 REVERSE LENGTH=637	LOC_Os04g04254.1	protein|sterol 3-beta-glucosyltransferase, putative, expressed	IMGA|Medtr1g098640.3	Sterol 3-beta-glucosyltransferase chr1 28356059-28363721 E EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0008152|metabolic process GO:0016125|sterol metabolic process GO:0030259|lipid glycosylation GO:0048316|seed development	GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups GO:0016906|sterol 3-beta-glucosyltransferase activity GO:0051507|beta-sitosterol UDP-glucosyltransferase activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_07426	A	A1S	Potri.002G238700	Potri.002G238700(AS)	POPTR_0002s23970	sp|Q39263|ZFP4_ARATH	Zinc finger protein 4 OS=Arabidopsis thaliana GN=ZFP4 PE=2 SV=2	AT5G48890.1	| Symbols: | C2H2-like zinc finger protein | chr5:19820353-19820874 FORWARD LENGTH=173	LOC_Os03g13600.2	protein|ZOS3-07 - C2H2 zinc finger protein, expressed	IMGA|Medtr5g077370.1	Zinc finger protein chr5 32033659-32032815 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0042752|regulation of circadian rhythm GO:0048579|negative regulation of long-day photoperiodism, flowering	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_07427	A	A1S	Potri.002G238800	Potri.002G238800(AS)	POPTR_0002s23990	sp|Q9M8Z8|PLY8_ARATH	Probable pectate lyase 8 OS=Arabidopsis thaliana GN=At3g07010 PE=2 SV=1	AT3G07010.1	| Symbols: | Pectin lyase-like superfamily protein | chr3:2212973-2216306 REVERSE LENGTH=416	LOC_Os04g05050.1	protein|pectate lyase precursor, putative, expressed	IMGA|AC235753_8.1	Pectate lyase AC235753.2 24915-27580 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0016829|lyase activity GO:0030570|pectate lyase activity	GO:0005576|extracellular region
pt2_07428	A	A1S	Potri.002G238900	Potri.002G238900(AS)	POPTR_0002s24000	NA	NA	AT3G07470.1	| Symbols: | Protein of unknown function, DUF538 | chr3:2387291-2388343 REVERSE LENGTH=169	LOC_Os01g68500.1	protein|expressed protein	IMGA|contig_24614_1.1	Unknown protein contig_24614 653-186 H PREDN 20111014	GO:0008150|biological_process	NA	GO:0005576|extracellular region GO:0005773|vacuole
pt2_07429	A	A1S	Potri.002G239000	Potri.002G239000(AS)	POPTR_0002s24010	NA	NA	AT3G07480.1	| Symbols: | 2Fe-2S ferredoxin-like superfamily protein | chr3:2389026-2389505 FORWARD LENGTH=159	LOC_Os09g33950.1	protein|ferredoxin 1-like isoform 1, putative, expressed	NA	NA	GO:0006511|ubiquitin-dependent protein catabolic process GO:0009853|photorespiration GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	GO:0009055|electron carrier activity GO:0051536|iron-sulfur cluster binding	GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_07430	A	A2S	Potri.002G239200	Potri.002G239200(AS) Potri.014G176900(DS)	POPTR_0002s24020	sp|Q67XL4|Y3544_ARATH	Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabidopsis thaliana GN=At3g25440 PE=2 SV=1	AT3G25440.1	| Symbols: | RNA-binding CRS1 / YhbY (CRM) domain protein | chr3:9223998-9225505 FORWARD LENGTH=444	NA	NA	NA	NA	GO:0042761|very long-chain fatty acid biosynthetic process	GO:0003723|RNA binding GO:0050291|sphingosine N-acyltransferase activity	GO:0009507|chloroplast
pt2_07431	A	A1S	Potri.002G239300	Potri.002G239300(AS)	POPTR_0002s24030	sp|Q9SZL8|FRS5_ARATH	Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=FRS5 PE=2 SV=1	AT2G43280.1	| Symbols: | Far-red impaired responsive (FAR1) family protein | chr2:17989739-17990861 FORWARD LENGTH=206	LOC_Os03g50900.1	protein|transposon protein, putative, unclassified, expressed	IMGA|Medtr5g099300.1	FAR1-related protein chr5 42508792-42503261 E EGN_Mt100125 20111014	GO:0006301|postreplication repair GO:0009639|response to red or far red light	NA	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07432	A	A1S	Potri.002G239400	Potri.002G239400(AS)	POPTR_0002s24040	sp|Q9SZL8|FRS5_ARATH	Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=FRS5 PE=2 SV=1	AT4G12850.1	| Symbols: | Far-red impaired responsive (FAR1) family protein | chr4:7537068-7538276 FORWARD LENGTH=183	LOC_Os03g50900.1	protein|transposon protein, putative, unclassified, expressed	IMGA|Medtr5g099300.1	FAR1-related protein chr5 42508792-42503261 E EGN_Mt100125 20111014	GO:0009639|response to red or far red light	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07433	A	A1S	Potri.002G239500	Potri.002G239500(AS)	POPTR_0002s24050	NA	NA	AT3G07510.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01580.1); Has 133 Blast hits to 133 proteins in 14 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:2393895-2394464 REVERSE LENGTH=189	LOC_Os10g09930.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_07434	A	A1S	Potri.002G239600	Potri.002G239600(AS)	POPTR_0002s24060	sp|Q9FIF7|PP435_ARATH	Putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic OS=Arabidopsis thaliana GN=PCMP-E41 PE=3 SV=1	AT5G59200.1	| Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:23888793-23890427 REVERSE LENGTH=544	LOC_Os07g02280.1	protein|pentatricopeptide, putative, expressed	IMGA|contig_53197_3.1	Pentatricopeptide repeat protein contig_53197 10365-8485 H PREDN 20111014	GO:0031425|chloroplast RNA processing	NA	GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_07435	B	B1S	Potri.002G239700	Potri.002G239700(BS)	POPTR_0002s24070	sp|Q9SUI4|PSAL_ARATH	Photosystem I reaction center subunit XI, chloroplastic OS=Arabidopsis thaliana GN=PSAL PE=1 SV=2	AT4G12800.1	| Symbols: PSAL | photosystem I subunit l | chr4:7521469-7522493 FORWARD LENGTH=219	LOC_Os12g23200.1	protein|photosystem I reaction center subunit XI, chloroplast precursor, putative, expressed	NA	NA	GO:0006364|rRNA processing GO:0009657|plastid organization GO:0010207|photosystem II assembly GO:0015979|photosynthesis GO:0019684|photosynthesis, light reaction GO:0030003|cellular cation homeostasis GO:0070838|divalent metal ion transport	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009522|photosystem I GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009538|photosystem I reaction center GO:0009579|thylakoid GO:0009941|chloroplast envelope GO:0010287|plastoglobule GO:0016020|membrane
pt2_07436	A	A1S	Potri.002G239800	Potri.002G239800(AS)	POPTR_0002s24080	sp|Q56XR7|STR4A_ARATH	Rhodanese-like domain-containing protein 4A, chloroplastic OS=Arabidopsis thaliana GN=STR4A PE=2 SV=1	AT3G25480.1	| Symbols: | Rhodanese/Cell cycle control phosphatase superfamily protein | chr3:9235591-9236598 REVERSE LENGTH=264	LOC_Os01g66600.1	protein|rhodanese-like, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane
pt2_07437	A	A1S	Potri.002G239900	Potri.002G239900(AS)	POPTR_0002s24090	sp|P0DH90|FRIGI_ARATH	Protein FRIGIDA OS=Arabidopsis thaliana GN=FRI PE=2 SV=1	AT5G48385.1	| Symbols: | FRIGIDA-like protein | chr5:19609471-19611712 FORWARD LENGTH=558	LOC_Os09g07380.1	protein|frigida, putative, expressed	IMGA|contig_49820_1.1	FRIGIDA-like protein contig_49820 4049-100 F PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07438	A	A1S	Potri.002G240000	Potri.002G240000(AS)	POPTR_0002s24100	sp|Q9ASS4|Y5838_ARATH	Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 OS=Arabidopsis thaliana GN=At5g48380 PE=1 SV=1	AT5G48380.1	| Symbols: BIR1 | BAK1-interacting receptor-like kinase 1 | chr5:19604584-19606532 REVERSE LENGTH=620	LOC_Os05g34270.1	protein|inactive receptor kinase At1g27190 precursor, putative, expressed	IMGA|Medtr1g079520.1	Pentatricopeptide repeat-containing protein chr1 19861760-19847347 E EGN_Mt100125 20111014	GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process GO:0009863|salicylic acid mediated signaling pathway GO:0031347|regulation of defense response GO:0031348|negative regulation of defense response GO:0042742|defense response to bacterium GO:0045087|innate immune response GO:0060548|negative regulation of cell death	GO:0004672|protein kinase activity GO:0005515|protein binding GO:0016301|kinase activity GO:0033612|receptor serine/threonine kinase binding	GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_07439	A	A1S	Potri.002G240100	Potri.002G240100(AS)	POPTR_0002s24110	sp|Q9R0X4|ACOT9_MOUSE	Acyl-coenzyme A thioesterase 9, mitochondrial OS=Mus musculus GN=Acot9 PE=1 SV=1	AT5G48370.2	| Symbols: | Thioesterase/thiol ester dehydrase-isomerase superfamily protein | chr5:19598666-19600512 REVERSE LENGTH=437	LOC_Os09g34190.1	protein|acyl-coenzyme A thioesterase 10, mitochondrial precursor, putative, expressed	NA	NA	NA	GO:0016788|hydrolase activity, acting on ester bonds GO:0047617|acyl-CoA hydrolase activity	GO:0005777|peroxisome GO:0009507|chloroplast
pt2_07440	A	A2S	Potri.002G240200	Potri.002G240200(AS) Potri.014G174700(DS)	POPTR_0002s24130	sp|Q9SE97|FH1_ARATH	Formin-like protein 1 OS=Arabidopsis thaliana GN=FH1 PE=1 SV=1	AT3G25500.1	| Symbols: AFH1, FH1, AHF1, ATFH1 | formin homology 1 | chr3:9251320-9254826 REVERSE LENGTH=1051	LOC_Os01g67240.1	protein|formin-like protein 1 precursor, putative, expressed	IMGA|Medtr5g015690.1	Formin-like protein chr5 5237562-5232899 E EGN_Mt100125 20111014	GO:0000271|polysaccharide biosynthetic process GO:0009825|multidimensional cell growth GO:0009932|cell tip growth GO:0010817|regulation of hormone levels GO:0016043|cellular component organization GO:0030036|actin cytoskeleton organization GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0048767|root hair elongation GO:0071555|cell wall organization	GO:0003779|actin binding GO:0005515|protein binding GO:0051015|actin filament binding	GO:0005618|cell wall GO:0005634|nucleus GO:0005886|plasma membrane GO:0016020|membrane
pt2_07441	A	A1S	Potri.002G240300	Potri.002G240300(AS)	POPTR_0002s24140	NA	NA	AT3G24750.1	| Symbols: | unknown protein; Has 25 Blast hits to 25 proteins in 12 species: Archae - 0; Bacteria - 8; Metazoa - 2; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:9036735-9037564 FORWARD LENGTH=169	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07442	A	A1S	Potri.002G240400	Potri.002G240400(AS)	POPTR_0002s24150	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07443	A	A1S	Potri.002G240500	Potri.002G240500(AS)	POPTR_0002s24160	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07444	A	A1S	Potri.002G240600	Potri.002G240600(AS)	POPTR_0002s24170	sp|Q99JH1|RP25L_MOUSE	Ribonuclease P protein subunit p25-like protein OS=Mus musculus GN=Rpp25l PE=2 SV=1	AT3G07030.1	| Symbols: | Alba DNA/RNA-binding protein | chr3:2223001-2225254 REVERSE LENGTH=405	LOC_Os03g52490.1	protein|nucleic acid binding protein, putative, expressed	NA	NA	NA	GO:0003676|nucleic acid binding	GO:0005829|cytosol
pt2_07445	A	A1S	Potri.002G240700	Potri.002G240700(AS)	POPTR_0002s24180	NA	NA	AT5G48850.1	| Symbols: ATSDI1 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:19805576-19807699 REVERSE LENGTH=306	LOC_Os05g43040.1	protein|tetratricopeptide repeat domain containing protein, expressed	NA	NA	GO:0006792|regulation of sulfur utilization GO:0010438|cellular response to sulfur starvation	NA	GO:0005634|nucleus
pt2_07446	B	B1S	Potri.002G240800	Potri.002G240800(BS)	POPTR_0002s24190	sp|O24035|PANC_LOTJA	Pantoate--beta-alanine ligase OS=Lotus japonicus GN=PANC PE=1 SV=3	AT5G48840.1	| Symbols: PANC, PTS, ATPTS | homolog of bacterial PANC | chr5:19803823-19805041 REVERSE LENGTH=310	LOC_Os03g63490.1	protein|pantoate--beta-alanine ligase, putative, expressed	NA	NA	GO:0009793|embryo development ending in seed dormancy GO:0015940|pantothenate biosynthetic process	GO:0004592|pantoate-beta-alanine ligase activity GO:0042803|protein homodimerization activity	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_07447	A	A1S	Potri.002G240900	Potri.002G240900(AS)	POPTR_0002s24200	sp|P47192|VA722_ARATH	Vesicle-associated membrane protein 722 OS=Arabidopsis thaliana GN=VAMP722 PE=2 SV=2	AT2G33120.1	| Symbols: SAR1, VAMP722, ATVAMP722 | synaptobrevin-related protein 1 | chr2:14043785-14045337 REVERSE LENGTH=221	LOC_Os07g09600.1	protein|vesicle-associated membrane protein, putative, expressed	IMGA|Medtr5g089370.1	Vesicle-associated membrane protein 7C chr5 37805654-37809372 F EGN_Mt100125 20111014	GO:0006810|transport GO:0016192|vesicle-mediated transport GO:0048451|petal formation GO:0048453|sepal formation	GO:0003674|molecular_function	GO:0005768|endosome GO:0005886|plasma membrane GO:0009507|chloroplast GO:0016020|membrane GO:0016021|integral to membrane
pt2_07448	A	A1S	Potri.002G241000	Potri.002G241000(AS)	POPTR_0002s24210	sp|Q8LDV3|Y4320_ARATH	Uncharacterized protein At4g13200, chloroplastic OS=Arabidopsis thaliana GN=At4g13200 PE=1 SV=2	AT4G13200.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 97 Blast hits to 97 proteins in 46 species: Archae - 0; Bacteria - 65; Metazoa - 2; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr4:7668292-7669166 REVERSE LENGTH=185	LOC_Os04g43350.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009579|thylakoid GO:0010287|plastoglobule
pt2_07449	A	A2S	Potri.002G241100	Potri.002G241100(AS) Potri.002G241000(AA)	POPTR_0002s24220	sp|Q54KS4|GNL3_DICDI	Guanine nucleotide-binding protein-like 3 homolog OS=Dictyostelium discoideum GN=gnl3 PE=3 SV=1	AT3G07050.1	| Symbols: | GTP-binding family protein | chr3:2229602-2232279 REVERSE LENGTH=582	LOC_Os01g27730.1	protein|GTPase of unknown function domain containing protein, putative, expressed	NA	NA	GO:0001510|RNA methylation GO:0010077|maintenance of inflorescence meristem identity GO:0045892|negative regulation of transcription, DNA-dependent GO:0048444|floral organ morphogenesis	GO:0005525|GTP binding	GO:0005634|nucleus GO:0005730|nucleolus GO:0009506|plasmodesma
pt2_07450	A	A1S	Potri.002G241200	Potri.002G241200(AS)	POPTR_0002s24230	NA	NA	AT5G48830.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:19800269-19802625 REVERSE LENGTH=511	LOC_Os02g31070.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_07451	A	A1S	Potri.002G241300	Potri.002G241300(AS)	POPTR_0002s24250	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006995|cellular response to nitrogen starvation GO:0007165|signal transduction GO:0010067|procambium histogenesis GO:0010087|phloem or xylem histogenesis GO:0010089|xylem development GO:0010223|secondary shoot formation GO:0090506|axillary shoot meristem initiation	GO:0005102|receptor binding GO:0033612|receptor serine/threonine kinase binding	GO:0005739|mitochondrion GO:0048046|apoplast
pt2_07452	B	B2S	Potri.013G071300	Potri.013G071300(BS) Potri.001G339300(DS)	POPTR_0002s24260	NA	NA	AT4G10890.1	| Symbols: | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2439 (InterPro:IPR018838); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:6688833-6692937 FORWARD LENGTH=527	LOC_Os11g38660.1	protein|transposon protein, putative, CACTA, En/Spm sub-class, expressed	IMGA|Medtr1g059320.1	hypothetical protein chr1 15361664-15360985 H EGN_Mt100125 20111014	NA	GO:0003674|molecular_function GO:0016788|hydrolase activity, acting on ester bonds	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07453	B	B3S	Potri.013G071200	Potri.013G071200(BS) Potri.001G391800(BS) Potri.001G391600(DS)	POPTR_0002s24270	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07454	A	A1S	Potri.002G241400	Potri.002G241400(AS)	POPTR_0002s24280	sp|Q5ZI67|NHLC2_CHICK	NHL repeat-containing protein 2 OS=Gallus gallus GN=NHLRC2 PE=2 SV=1	AT3G07060.1	| Symbols: emb1974 | NHL domain-containing protein | chr3:2232760-2236913 FORWARD LENGTH=774	LOC_Os08g04120.1	protein|expressed protein	NA	NA	GO:0006346|methylation-dependent chromatin silencing GO:0009793|embryo development ending in seed dormancy GO:0031048|chromatin silencing by small RNA GO:0051567|histone H3-K9 methylation	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_07455	A	A1S	Potri.002G241500	Potri.002G241500(AS)	POPTR_0002s24290	sp|P00303|BABL_CUCSA	Basic blue protein OS=Cucumis sativus PE=1 SV=1	AT2G02850.1	| Symbols: ARPN | plantacyanin | chr2:826630-827720 REVERSE LENGTH=129	LOC_Os03g50160.1	protein|plastocyanin-like domain containing protein, putative, expressed	IMGA|Medtr5g006040.1	Early nodulin-like protein chr5 502223-501280 F EGN_Mt100125 20111014	GO:0009640|photomorphogenesis GO:0009737|response to abscisic acid stimulus GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009856|pollination GO:0009909|regulation of flower development GO:0009933|meristem structural organization GO:0010162|seed dormancy process GO:0010182|sugar mediated signaling pathway GO:0010228|vegetative to reproductive phase transition of meristem GO:0016567|protein ubiquitination GO:0019915|lipid storage GO:0048653|anther development GO:0050826|response to freezing	GO:0005507|copper ion binding GO:0009055|electron carrier activity	GO:0005886|plasma membrane GO:0048046|apoplast GO:0048196|plant extracellular matrix
pt2_07456	A	A1S	Potri.002G241600	Potri.002G241600(AS)	POPTR_0002s24300	sp|Q9SFT7|Y3707_ARATH	Serine/threonine-protein kinase At3g07070 OS=Arabidopsis thaliana GN=At3g07070 PE=2 SV=1	AT3G07070.1	| Symbols: | Protein kinase superfamily protein | chr3:2238455-2240074 FORWARD LENGTH=414	LOC_Os01g71000.1	protein|protein kinase APK1B, chloroplast precursor, putative, expressed	IMGA|Medtr5g092120.1	Serine/threonine protein kinase chr5 39187993-39185584 F EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_07457	A	A1S	Potri.002G241700	Potri.002G241700(AS)	POPTR_0002s24310	sp|Q6ICB0|DESI1_HUMAN	Desumoylating isopeptidase 1 OS=Homo sapiens GN=DESI1 PE=1 SV=1	AT3G07090.1	| Symbols: | PPPDE putative thiol peptidase family protein | chr3:2243153-2244476 REVERSE LENGTH=265	LOC_Os02g56900.1	protein|thioredoxin family protein, putative, expressed	IMGA|Medtr5g013040.1	hypothetical protein chr5 3837813-3834899 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_07458	A	A1S	Potri.002G241800	Potri.002G241800(AS)	POPTR_0002s24320	sp|Q9FUY2|LEUNG_ARATH	Transcriptional corepressor LEUNIG OS=Arabidopsis thaliana GN=LUG PE=1 SV=2	AT2G32700.6	| Symbols: LUH | LEUNIG_homolog | chr2:13867235-13871844 FORWARD LENGTH=785	LOC_Os02g56880.1	protein|transcriptional corepressor LEUNIG, putative, expressed	IMGA|Medtr1g011610.1	Transcriptional corepressor LEUNIG chr1 2436342-2425793 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009790|embryo development GO:0009827|plant-type cell wall modification GO:0009908|flower development GO:0045892|negative regulation of transcription, DNA-dependent GO:0048358|mucilage pectin biosynthetic process	GO:0003713|transcription coactivator activity	GO:0005634|nucleus
pt2_07459	A	A1S	Potri.002G241900	Potri.002G241900(AS)	POPTR_0002s24330	sp|Q8LBL5|PRT1_ARATH	E3 ubiquitin-protein ligase PRT1 OS=Arabidopsis thaliana GN=PRT1 PE=2 SV=2	AT3G24800.1	| Symbols: PRT1 | proteolysis 1 | chr3:9055653-9057795 FORWARD LENGTH=410	LOC_Os02g40810.1	protein|Zinc finger, ZZ type domain containing protein, expressed	NA	NA	GO:0006511|ubiquitin-dependent protein catabolic process	GO:0004842|ubiquitin-protein ligase activity GO:0008270|zinc ion binding	GO:0000151|ubiquitin ligase complex GO:0005737|cytoplasm
pt2_07460	A	A1S	Potri.002G241900	Potri.002G241900(AS)	POPTR_0002s24340	sp|Q8LBL5|PRT1_ARATH	E3 ubiquitin-protein ligase PRT1 OS=Arabidopsis thaliana GN=PRT1 PE=2 SV=2	AT3G24800.1	| Symbols: PRT1 | proteolysis 1 | chr3:9055653-9057795 FORWARD LENGTH=410	LOC_Os02g40810.1	protein|Zinc finger, ZZ type domain containing protein, expressed	NA	NA	GO:0006511|ubiquitin-dependent protein catabolic process	GO:0004842|ubiquitin-protein ligase activity GO:0008270|zinc ion binding	GO:0000151|ubiquitin ligase complex GO:0005737|cytoplasm
pt2_07461	A	A1S	Potri.002G242000	Potri.002G242000(AS)	POPTR_0002s24350	sp|P23472|CHLY_HEVBR	Hevamine-A OS=Hevea brasiliensis PE=1 SV=2	AT5G24090.1	| Symbols: ATCHIA, CHIA | chitinase A | chr5:8143805-8145153 REVERSE LENGTH=302	LOC_Os07g19040.1	protein|glycosyl hydrolase, putative, expressed	IMGA|Medtr5g043550.1	Class III acidic chitinase chr5 18721014-18720130 H EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0009409|response to cold GO:0009611|response to wounding GO:0009642|response to light intensity GO:0009651|response to salt stress GO:0010228|vegetative to reproductive phase transition of meristem GO:0016926|protein desumoylation GO:0042631|cellular response to water deprivation GO:0050665|hydrogen peroxide biosynthetic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0043169|cation binding	GO:0005576|extracellular region
pt2_07462	A	A1S	Potri.002G242100	Potri.002G242100(AS)	POPTR_0002s24360	sp|Q9FKB5|KRP3_ARATH	Cyclin-dependent kinase inhibitor 3 OS=Arabidopsis thaliana GN=KRP3 PE=1 SV=1	AT5G48820.1	| Symbols: KRP3, ICK6 | inhibitor/interactor with cyclin-dependent kinase | chr5:19792608-19794346 REVERSE LENGTH=222	LOC_Os03g04490.1	protein|cyclin-dependent kinase inhibitor, putative, expressed	IMGA|Medtr1g072860.1	Cyclin-dependent kinase inhibitor chr1 18389174-18387543 E EGN_Mt100125 20111014	GO:0000280|nuclear division GO:0006275|regulation of DNA replication GO:0006342|chromatin silencing GO:0007050|cell cycle arrest GO:0010389|regulation of G2/M transition of mitotic cell cycle GO:0010440|stomatal lineage progression GO:0016569|covalent chromatin modification GO:0031047|gene silencing by RNA GO:0042023|DNA endoreduplication GO:0045736|negative regulation of cyclin-dependent protein kinase activity GO:0051225|spindle assembly	GO:0004861|cyclin-dependent protein kinase inhibitor activity GO:0005515|protein binding GO:0030332|cyclin binding	GO:0005634|nucleus
pt2_07463	A	A1S	Potri.002G242200	Potri.002G242200(AS)	POPTR_0002s24370	NA	NA	AT3G24820.1	| Symbols: | BSD domain-containing protein | chr3:9062717-9064366 REVERSE LENGTH=186	LOC_Os04g56654.1	protein|BSD domain-containing protein, putative, expressed	IMGA|Medtr5g048180.1	hypothetical protein chr5 20677257-20681979 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07464	A	A1S	Potri.002G242300	Potri.002G242300(AS)	POPTR_0002s24380	sp|Q9FKB6|Y5880_ARATH	BTB/POZ domain-containing protein At5g48800 OS=Arabidopsis thaliana GN=At5g48800 PE=1 SV=1	AT5G48800.1	| Symbols: | Phototropic-responsive NPH3 family protein | chr5:19786881-19789003 FORWARD LENGTH=614	LOC_Os12g02540.1	protein|BTBN23 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed	IMGA|Medtr5g016060.1	Root phototropism protein chr5 5421475-5417937 H EGN_Mt100125 20111014	GO:0009416|response to light stimulus GO:0009855|determination of bilateral symmetry GO:0009944|polarity specification of adaxial/abaxial axis GO:0010014|meristem initiation GO:0010075|regulation of meristem growth	GO:0004871|signal transducer activity	GO:0005886|plasma membrane
pt2_07465	A	A1S	Potri.002G242400	Potri.002G242400(AS)	POPTR_0002s24390	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_07466	A	A1S	Potri.002G242500	Potri.002G242500(AS)	POPTR_0002s24400	sp|P49098|CYB5_TOBAC	Cytochrome b5 OS=Nicotiana tabacum PE=2 SV=1	AT2G32720.1	| Symbols: B5 #4, ATCB5-B, CB5-B | cytochrome B5 isoform B | chr2:13877013-13878447 REVERSE LENGTH=134	LOC_Os01g73990.1	protein|cytochrome b5-like Heme/Steroid binding domain containing protein, expressed	IMGA|Medtr5g045630.1	Cytochrome b5 chr5 19607244-19603273 E EGN_Mt100125 20111014	GO:0016126|sterol biosynthetic process GO:0019745|pentacyclic triterpenoid biosynthetic process GO:0043447|alkane biosynthetic process	GO:0005515|protein binding GO:0020037|heme binding	GO:0005575|cellular_component GO:0005783|endoplasmic reticulum
pt2_07467	A	A1S	Potri.002G242600	Potri.002G242600(AS)	POPTR_0002s24410	sp|Q9SVR0|R13A3_ARATH	60S ribosomal protein L13a-3 OS=Arabidopsis thaliana GN=RPL13AC PE=2 SV=1	AT4G13170.1	| Symbols: | Ribosomal protein L13 family protein | chr4:7655133-7656542 REVERSE LENGTH=206	LOC_Os03g54890.1	protein|ribosomal protein L13, putative, expressed	IMGA|Medtr5g083790.1	60S ribosomal protein L13A chr5 35138693-35136475 F EGN_Mt100125 20111014	GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005737|cytoplasm GO:0005840|ribosome GO:0015934|large ribosomal subunit GO:0016020|membrane GO:0022625|cytosolic large ribosomal subunit
pt2_07468	A	A1S	Potri.002G242700	Potri.002G242700(AS)	POPTR_0002s24420	sp|C0LGV0|Y5487_ARATH	Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana GN=At5g48740 PE=2 SV=1	AT5G48740.1	| Symbols: | Leucine-rich repeat protein kinase family protein | chr5:19765324-19769314 REVERSE LENGTH=895	LOC_Os12g01200.3	protein|senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed	IMGA|Medtr5g058090.1	Receptor-like protein kinase chr5 23323996-23335232 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_07469	A	A1S	Potri.002G242800	Potri.002G242800(AS)	POPTR_0002s24430	NA	NA	AT4G13150.1	| Symbols: | unknown protein; Has 83 Blast hits to 82 proteins in 37 species: Archae - 0; Bacteria - 51; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr4:7650326-7652237 REVERSE LENGTH=347	LOC_Os02g09440.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_07470	C	C1S	Potri.002G242900	Potri.002G242900(CS)	NA	NA	AT4G13630.2	| Symbols: | Protein of unknown function, DUF593 | chr4:7934093-7936029 REVERSE LENGTH=569	LOC_Os03g15410.1	protein|expressed protein	NA	NA	GO:0046777|protein autophosphorylation	GO:0004674|protein serine/threonine kinase activity	NA
pt2_07471	C	C1S	Potri.002G243000	Potri.002G243000(CS)	sp|Q10137|SEC14_SCHPO	Sec14 cytosolic factor OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sec14 PE=2 SV=1	AT3G24840.1	| Symbols: | Sec14p-like phosphatidylinositol transfer family protein | chr3:9067301-9070256 FORWARD LENGTH=579	LOC_Os02g48990.1	protein|phosphatidylinositol transfer, putative, expressed	IMGA|Medtr5g021050.1	Phosphatidylinositol transfer-like protein IV chr5 7812729-7816184 E EGN_Mt100125 20111014	GO:0006810|transport	GO:0005215|transporter activity	GO:0005622|intracellular GO:0005739|mitochondrion
pt2_07472	G	G1	NA	NA	POPTR_0002s24460	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07473	A	A1S	Potri.002G243200	Potri.002G243200(AS)	POPTR_0002s24470	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07474	A	A1S	Potri.002G243300	Potri.002G243300(AS)	POPTR_0002s24480	NA	NA	AT3G24860.1	| Symbols: | Homeodomain-like superfamily protein | chr3:9073642-9074574 FORWARD LENGTH=310	LOC_Os08g37810.1	protein|transcription factor like protein, putative, expressed	IMGA|Medtr5g017500.1	hypothetical protein chr5 6140380-6141354 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_07475	A	A1S	Potri.002G243400	Potri.002G243400(AS)	POPTR_0002s24490	sp|Q96L91|EP400_HUMAN	E1A-binding protein p400 OS=Homo sapiens GN=EP400 PE=1 SV=4	AT3G24870.1	| Symbols: | Helicase/SANT-associated, DNA binding protein | chr3:9075237-9084278 REVERSE LENGTH=1907	LOC_Os08g08000.1	protein|DNA binding protein, putative, expressed	IMGA|contig_117667_1.1	Chromatin modification-related protein VID21 contig_117667 979-34 H PREDN 20111014	NA	GO:0003677|DNA binding	GO:0005634|nucleus GO:0048046|apoplast
pt2_07476	A	A2S	Potri.002G243500	Potri.002G243500(AS) Potri.002G243700(BS)	POPTR_0002s24500	sp|A9GP90|UREG_SORC5	Urease accessory protein UreG OS=Sorangium cellulosum (strain So ce56) GN=ureG PE=3 SV=1	AT2G34470.1	| Symbols: UREG, PSKF109 | urease accessory protein G | chr2:14530900-14532411 REVERSE LENGTH=275	LOC_Os05g49050.1	protein|CobW/P47K family protein, putative, expressed	NA	NA	GO:0006807|nitrogen compound metabolic process GO:0048554|positive regulation of metalloenzyme activity	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016151|nickel cation binding GO:0046872|metal ion binding	GO:0005737|cytoplasm GO:0016020|membrane
pt2_07477	A	A1S	Potri.002G243600	Potri.002G243600(AS)	POPTR_0002s24510	sp|Q9FKC3|PP424_ARATH	Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidopsis thaliana GN=At5g48730 PE=2 SV=2	AT5G48730.1	| Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr5:19763152-19765136 FORWARD LENGTH=508	LOC_Os06g07550.1	protein|PPR repeat domain containing protein, putative, expressed	IMGA|Medtr5g008300.1	Pentatricopeptide repeat-containing protein chr5 1493031-1498664 E EGN_Mt100125 20111014	GO:0008150|biological_process	NA	NA
pt2_07478	A	A2S	Potri.002G243700	Potri.002G243700(AS) Potri.002G243500(AS)	POPTR_0002s24520	sp|A9GP90|UREG_SORC5	Urease accessory protein UreG OS=Sorangium cellulosum (strain So ce56) GN=ureG PE=3 SV=1	AT2G34470.1	| Symbols: UREG, PSKF109 | urease accessory protein G | chr2:14530900-14532411 REVERSE LENGTH=275	LOC_Os05g49050.1	protein|CobW/P47K family protein, putative, expressed	NA	NA	GO:0006807|nitrogen compound metabolic process GO:0048554|positive regulation of metalloenzyme activity	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016151|nickel cation binding GO:0046872|metal ion binding	GO:0005737|cytoplasm GO:0016020|membrane
pt2_07479	A	A2S	Potri.002G243700	Potri.002G243700(AS) Potri.002G243500(BS)	POPTR_0002s24520	sp|A9GP90|UREG_SORC5	Urease accessory protein UreG OS=Sorangium cellulosum (strain So ce56) GN=ureG PE=3 SV=1	AT2G34470.1	| Symbols: UREG, PSKF109 | urease accessory protein G | chr2:14530900-14532411 REVERSE LENGTH=275	LOC_Os05g49050.1	protein|CobW/P47K family protein, putative, expressed	NA	NA	GO:0006807|nitrogen compound metabolic process GO:0048554|positive regulation of metalloenzyme activity	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016151|nickel cation binding GO:0046872|metal ion binding	GO:0005737|cytoplasm GO:0016020|membrane
pt2_07480	A	A1S	Potri.002G243800	Potri.002G243800(AS)	POPTR_0002s24530	NA	NA	AT3G07120.1	| Symbols: | RING/U-box superfamily protein | chr3:2254560-2255642 FORWARD LENGTH=360	LOC_Os01g68900.1	protein|zinc finger, C3HC4 type family protein, expressed	NA	NA	NA	GO:0005516|calmodulin binding GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_07481	A	A1S	Potri.002G243900	Potri.002G243900(AS)	POPTR_0002s24540	sp|Q9SFU3|PPA15_ARATH	Purple acid phosphatase 15 OS=Arabidopsis thaliana GN=PAP15 PE=1 SV=1	AT3G07130.1	| Symbols: ATPAP15, PAP15 | purple acid phosphatase 15 | chr3:2255763-2257981 REVERSE LENGTH=532	LOC_Os03g63074.1	protein|Ser/Thr protein phosphatase family protein, expressed	IMGA|Medtr5g092360.1	Purple acid phosphatase chr5 39299066-39296046 E EGN_Mt100125 20111014	GO:0009845|seed germination GO:0009846|pollen germination	GO:0003993|acid phosphatase activity GO:0004722|protein serine/threonine phosphatase activity GO:0016787|hydrolase activity GO:0046872|metal ion binding	GO:0005576|extracellular region
pt2_07482	A	A1S	Potri.002G244000	Potri.002G244000(AS)	POPTR_0002s24550	sp|Q6NLW5|XRI1_ARATH	Protein XRI1 OS=Arabidopsis thaliana GN=XRI1 PE=1 SV=2	AT5G48720.2	| Symbols: XRI, XRI1 | x-ray induced transcript 1 | chr5:19759233-19761621 FORWARD LENGTH=300	LOC_Os01g68930.1	protein|expressed protein	NA	NA	GO:0006281|DNA repair GO:0006302|double-strand break repair GO:0006355|regulation of transcription, DNA-dependent GO:0007140|male meiosis GO:0007143|female meiosis GO:0009165|nucleotide biosynthetic process GO:0009555|pollen development GO:0010165|response to X-ray GO:0010332|response to gamma radiation GO:0043687|post-translational protein modification GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003674|molecular_function GO:0005515|protein binding	GO:0005634|nucleus
pt2_07483	A	A1S	Potri.002G244100	Potri.002G244100(AS)	POPTR_0002s24560	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006863|purine nucleobase transport GO:0010184|cytokinin transport GO:0015931|nucleobase-containing compound transport	GO:0005345|purine nucleobase transmembrane transporter activity GO:0015211|purine nucleoside transmembrane transporter activity	GO:0005887|integral to plasma membrane GO:0009507|chloroplast GO:0016020|membrane
pt2_07484	A	A1S	Potri.002G244200	Potri.002G244200(AS)	POPTR_0002s24570	sp|Q9SV60|XTH2_ARATH	Xyloglucan endotransglucosylase/hydrolase protein 2 OS=Arabidopsis thaliana GN=XTH2 PE=2 SV=1	AT4G13090.1	| Symbols: XTH2 | xyloglucan endotransglucosylase/hydrolase 2 | chr4:7631535-7632870 REVERSE LENGTH=292	LOC_Os11g33270.1	protein|glycosyl hydrolases family 16, putative, expressed	IMGA|Medtr5g091730.1	Xyloglucan endotransglucosylase/hydrolase chr5 38992618-38991125 E EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0006073|cellular glucan metabolic process	GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0016762|xyloglucan:xyloglucosyl transferase activity GO:0016798|hydrolase activity, acting on glycosyl bonds	GO:0005576|extracellular region GO:0005618|cell wall GO:0048046|apoplast
pt2_07485	A	A1S	Potri.002G244300	Potri.002G244300(AS)	POPTR_0002s24580	NA	NA	AT3G07140.2	| Symbols: | GPI transamidase component Gpi16 subunit family protein | chr3:2261278-2263632 FORWARD LENGTH=643	LOC_Os11g28980.1	protein|GPI transamidase component Gpi16 subunit family protein, putative, expressed	NA	NA	GO:0008150|biological_process GO:0042732|D-xylose metabolic process	GO:0003923|GPI-anchor transamidase activity	GO:0005783|endoplasmic reticulum GO:0009507|chloroplast GO:0016021|integral to membrane GO:0042765|GPI-anchor transamidase complex
pt2_07486	A	A1S	Potri.002G244400	Potri.002G244400(AS)	POPTR_0002s24590	NA	NA	AT3G07150.1	| Symbols: | unknown protein; Has 19 Blast hits to 19 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:2263806-2264576 REVERSE LENGTH=199	LOC_Os01g68960.1	protein|expressed protein	NA	NA	GO:0006457|protein folding GO:0008150|biological_process GO:0009408|response to heat GO:0009644|response to high light intensity GO:0042542|response to hydrogen peroxide	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_07487	A	A1S	Potri.002G244400	Potri.002G244400(AS)	POPTR_0002s24590	NA	NA	AT3G07150.1	| Symbols: | unknown protein; Has 19 Blast hits to 19 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:2263806-2264576 REVERSE LENGTH=199	LOC_Os01g68960.1	protein|expressed protein	NA	NA	GO:0006457|protein folding GO:0008150|biological_process GO:0009408|response to heat GO:0009644|response to high light intensity GO:0042542|response to hydrogen peroxide	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_07488	A	A1S	Potri.002G244400	Potri.002G244400(AS)	POPTR_0002s24590	NA	NA	AT3G07150.1	| Symbols: | unknown protein; Has 19 Blast hits to 19 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:2263806-2264576 REVERSE LENGTH=199	LOC_Os01g68960.1	protein|expressed protein	NA	NA	GO:0006457|protein folding GO:0008150|biological_process GO:0009408|response to heat GO:0009644|response to high light intensity GO:0042542|response to hydrogen peroxide	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_07489	A	A1S	Potri.002G244500	Potri.002G244500(AS)	POPTR_0002s24600	NA	NA	AT1G04850.1	| Symbols: | ubiquitin-associated (UBA)/TS-N domain-containing protein | chr1:1365311-1368706 REVERSE LENGTH=413	LOC_Os02g30180.3	protein|ZOS2-07 - C2H2 zinc finger protein, expressed	NA	NA	GO:0006486|protein glycosylation GO:0006623|protein targeting to vacuole GO:0008150|biological_process	GO:0008270|zinc ion binding	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_07490	A	A1S	Potri.002G244600	Potri.002G244600(AS)	POPTR_0002s24610	sp|Q94CD1|HHT1_ARATH	Omega-hydroxypalmitate O-feruloyl transferase OS=Arabidopsis thaliana GN=HHT1 PE=1 SV=1	AT1G65450.1	| Symbols: | HXXXD-type acyl-transferase family protein | chr1:24315875-24318895 FORWARD LENGTH=450	LOC_Os11g31090.1	protein|transferase family protein, putative, expressed	IMGA|Medtr5g076700.1	Benzoyl coenzyme A benzyl alcohol benzoyl transferase chr5 31729976-31732699 H EGN_Mt100125 20111014	GO:0009567|double fertilization forming a zygote and endosperm	GO:0016740|transferase activity GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_07491	A	A2S	Potri.002G244700	Potri.002G244700(AS) Potri.014G190800(DS)	POPTR_0002s24620	NA	NA	AT3G07170.1	| Symbols: | Sterile alpha motif (SAM) domain-containing protein | chr3:2280428-2282097 FORWARD LENGTH=203	LOC_Os04g30910.2	protein|SAM domain family protein, expressed	IMGA|Medtr5g035810.1	SAM domain family protein chr5 15163139-15156310 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0016757|transferase activity, transferring glycosyl groups	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_07492	A	A2S	Potri.002G245000	Potri.002G245000(AS) Potri.002G244800(AS)	POPTR_0002s24630	sp|Q5XI31|PIGS_RAT	GPI transamidase component PIG-S OS=Rattus norvegicus GN=Pigs PE=2 SV=3	AT3G07180.1	| Symbols: | GPI transamidase component PIG-S-related | chr3:2282455-2285475 REVERSE LENGTH=599	LOC_Os01g67960.1	protein|GPI transamidase component PIG-S-related, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005774|vacuolar membrane GO:0005783|endoplasmic reticulum
pt2_07493	A	A2S	Potri.002G244900	Potri.002G244900(AS) Potri.002G245100(AS)	POPTR_0002s24640	NA	NA	AT1G06440.1	| Symbols: | Ubiquitin carboxyl-terminal hydrolase family protein | chr1:1963733-1964905 REVERSE LENGTH=390	LOC_Os10g36680.1	protein|ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed	IMGA|Medtr1g072550.1	hypothetical protein chr1 18188103-18185295 E EGN_Mt100125 20111014	NA	NA	GO:0009507|chloroplast
pt2_07494	A	A1S	Potri.002G245200	Potri.002G245200(AS)	POPTR_0002s24650	sp|Q9LJR6|PP253_ARATH	Putative pentatricopeptide repeat-containing protein At3g25060, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E96 PE=3 SV=1	AT3G25060.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:9128516-9130321 FORWARD LENGTH=601	LOC_Os10g39460.2	protein|selenium-binding protein-like, putative, expressed	IMGA|Medtr1g071240.1	Pentatricopeptide repeat-containing protein chr1 17511913-17505644 H EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005739|mitochondrion
pt2_07495	A	A1S	Potri.002G245300	Potri.002G245300(AS)	POPTR_0002s24670	NA	NA	AT3G07190.1	| Symbols: | B-cell receptor-associated protein 31-like | chr3:2285979-2287155 REVERSE LENGTH=220	LOC_Os03g63110.1	protein|prefoldin, putative, expressed	IMGA|Medtr5g093360.1	hypothetical protein chr5 39717149-39717484 H EGN_Mt100125 20111014	GO:0006886|intracellular protein transport	GO:0003674|molecular_function	GO:0005783|endoplasmic reticulum GO:0009507|chloroplast GO:0016021|integral to membrane
pt2_07496	A	A1S	Potri.002G245400	Potri.002G245400(AS)	POPTR_0002s24680	sp|Q8GYN5|RIN4_ARATH	RPM1-interacting protein 4 OS=Arabidopsis thaliana GN=RIN4 PE=1 SV=1	AT3G25070.1	| Symbols: RIN4 | RPM1 interacting protein 4 | chr3:9132458-9133747 FORWARD LENGTH=211	LOC_Os03g63140.1	protein|nitrate-induced NOI protein, expressed	IMGA|Medtr5g096030.1	RPM1-interacting protein chr5 40945881-40948340 F EGN_Mt100125 20111014	GO:0002237|response to molecule of bacterial origin GO:0006468|protein phosphorylation GO:0009617|response to bacterium GO:0009626|plant-type hypersensitive response GO:0009816|defense response to bacterium, incompatible interaction GO:0010204|defense response signaling pathway, resistance gene-independent GO:0034051|negative regulation of plant-type hypersensitive response GO:0045087|innate immune response	GO:0005515|protein binding	GO:0005634|nucleus GO:0005886|plasma membrane GO:0016020|membrane
pt2_07497	R	R	NA	NA	POPTR_0002s24690	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07498	A	A1S	Potri.002G245600	Potri.002G245600(AS)	POPTR_0002s24700	sp|Q42561|FATA1_ARATH	Oleoyl-acyl carrier protein thioesterase 1, chloroplastic OS=Arabidopsis thaliana GN=FATA PE=1 SV=1	AT3G25110.1	| Symbols: AtFaTA, FaTA | fatA acyl-ACP thioesterase | chr3:9146589-9148273 REVERSE LENGTH=362	LOC_Os09g32760.1	protein|acyl-ACP thioesterase, putative, expressed	NA	NA	GO:0006633|fatty acid biosynthetic process	GO:0000036|ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process GO:0016297|acyl-[acyl-carrier-protein] hydrolase activity GO:0016790|thiolester hydrolase activity	GO:0009507|chloroplast
pt2_07499	A	A1S	Potri.002G245700	Potri.002G245700(AS)	POPTR_0002s24710	NA	NA	AT3G07210.1	| Symbols: | unknown protein; Has 97 Blast hits to 85 proteins in 31 species: Archae - 0; Bacteria - 14; Metazoa - 7; Fungi - 19; Plants - 37; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). | chr3:2293000-2295119 REVERSE LENGTH=547	LOC_Os01g68830.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07500	A	A1S	Potri.002G245800	Potri.002G245800(AS)	POPTR_0002s24720	NA	NA	AT1G48140.1	| Symbols: | dolichol-phosphate mannosyltransferase-related | chr1:17783402-17783914 FORWARD LENGTH=89	LOC_Os02g51420.1	protein|expressed protein	NA	NA	GO:0008150|biological_process GO:0009853|photorespiration	GO:0004582|dolichyl-phosphate beta-D-mannosyltransferase activity	GO:0005576|extracellular region GO:0005739|mitochondrion GO:0005783|endoplasmic reticulum GO:0033185|dolichol-phosphate-mannose synthase complex
pt2_07501	A	A1S	Potri.002G245900	Potri.002G245900(AS)	POPTR_0002s24730	sp|O14270|FHL1_SCHPO	Fork head transcription factor 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fhl1 PE=2 SV=2	AT3G07260.1	| Symbols: | SMAD/FHA domain-containing protein | chr3:2309704-2310630 FORWARD LENGTH=251	LOC_Os08g41710.1	protein|FHA domain containing protein, putative, expressed	NA	NA	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07502	A	A1S	Potri.002G246000	Potri.002G246000(AS)	POPTR_0002s24740	NA	NA	AT3G25120.1	| Symbols: | Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein | chr3:9149785-9151068 REVERSE LENGTH=189	LOC_Os04g30740.1	protein|mitochondrial import inner membrane translocase subunit Tim17, putative, expressed	NA	NA	GO:0015031|protein transport	GO:0015450|P-P-bond-hydrolysis-driven protein transmembrane transporter activity	GO:0005744|mitochondrial inner membrane presequence translocase complex GO:0009507|chloroplast
pt2_07503	A	A1S	Potri.002G246100	Potri.002G246100(AS)	POPTR_0002s24750	sp|Q56XP9|ERFL1_ARATH	Ethylene-responsive transcription factor-like protein At4g13040 OS=Arabidopsis thaliana GN=At4g13040 PE=2 SV=2	AT4G13040.1	| Symbols: | Integrase-type DNA-binding superfamily protein | chr4:7614100-7615310 FORWARD LENGTH=226	LOC_Os02g29550.1	protein|AP2 domain containing protein, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_07504	A	A1S	Potri.002G246200	Potri.002G246200(AS)	POPTR_0002s24760	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07505	A	A1S	Potri.002G246300	Potri.002G246300(AS)	POPTR_0002s24770	sp|Q09020|PR4_PHAVU	Wound-induced basic protein OS=Phaseolus vulgaris GN=PR4 PE=2 SV=1	AT3G07230.1	| Symbols: | wound-responsive protein-related | chr3:2299920-2300183 FORWARD LENGTH=46	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005829|cytosol
pt2_07506	A	A1S	Potri.002G246400	Potri.002G246400(AS)	POPTR_0002s24780	NA	NA	AT3G25130.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; Has 3885 Blast hits to 2658 proteins in 280 species: Archae - 12; Bacteria - 208; Metazoa - 970; Fungi - 222; Plants - 148; Viruses - 11; Other Eukaryotes - 2314 (source: NCBI BLink). | chr3:9152434-9153654 FORWARD LENGTH=406	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_07507	A	A1S	Potri.002G246500	Potri.002G246500(AS)	POPTR_0002s24790	sp|Q9LSG3|GAUT8_ARATH	Galacturonosyltransferase 8 OS=Arabidopsis thaliana GN=GAUT8 PE=1 SV=1	AT3G25140.1	| Symbols: GAUT8, QUA1 | Nucleotide-diphospho-sugar transferases superfamily protein | chr3:9154748-9156642 FORWARD LENGTH=559	LOC_Os02g29530.1	protein|glycosyl transferase 8 domain containing protein, putative, expressed	IMGA|Medtr5g036580.1	Glycosyltransferase CAZy family GT8 chr5 15539123-15537936 F EGN_Mt100125 20111014	GO:0010289|homogalacturonan biosynthetic process GO:0016051|carbohydrate biosynthetic process GO:0045489|pectin biosynthetic process	GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups GO:0047262|polygalacturonate 4-alpha-galacturonosyltransferase activity	GO:0005739|mitochondrion GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_07508	A	A1S	Potri.002G246600	Potri.002G246600(AS)	POPTR_0002s24800	sp|O94260|G3BP_SCHPO	Putative G3BP-like protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=nxt3 PE=1 SV=1	AT3G25150.1	| Symbols: | Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain | chr3:9157161-9159362 REVERSE LENGTH=488	LOC_Os02g29480.1	protein|RNA-binding protein-like, putative, expressed	IMGA|Medtr1g045800.1	Ras GTPase-activating protein-binding protein chr1 13719361-13714832 F EGN_Mt100125 20111014	GO:0006810|transport GO:0006913|nucleocytoplasmic transport GO:0009664|plant-type cell wall organization GO:0042545|cell wall modification GO:0048573|photoperiodism, flowering	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005622|intracellular GO:0005737|cytoplasm GO:0009507|chloroplast
pt2_07509	A	A1S	Potri.002G246600	Potri.002G246600(AS)	POPTR_0002s24800	sp|O94260|G3BP_SCHPO	Putative G3BP-like protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=nxt3 PE=1 SV=1	AT3G25150.1	| Symbols: | Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain | chr3:9157161-9159362 REVERSE LENGTH=488	LOC_Os02g29480.1	protein|RNA-binding protein-like, putative, expressed	IMGA|Medtr1g045800.1	Ras GTPase-activating protein-binding protein chr1 13719361-13714832 F EGN_Mt100125 20111014	GO:0006810|transport GO:0006913|nucleocytoplasmic transport GO:0009664|plant-type cell wall organization GO:0042545|cell wall modification GO:0048573|photoperiodism, flowering	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005622|intracellular GO:0005737|cytoplasm GO:0009507|chloroplast
pt2_07510	A	A1S	Potri.002G246600	Potri.002G246600(AS)	POPTR_0002s24800	sp|O94260|G3BP_SCHPO	Putative G3BP-like protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=nxt3 PE=1 SV=1	AT3G25150.1	| Symbols: | Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain | chr3:9157161-9159362 REVERSE LENGTH=488	LOC_Os02g29480.1	protein|RNA-binding protein-like, putative, expressed	IMGA|Medtr1g045800.1	Ras GTPase-activating protein-binding protein chr1 13719361-13714832 F EGN_Mt100125 20111014	GO:0006810|transport GO:0006913|nucleocytoplasmic transport GO:0009664|plant-type cell wall organization GO:0042545|cell wall modification GO:0048573|photoperiodism, flowering	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005622|intracellular GO:0005737|cytoplasm GO:0009507|chloroplast
pt2_07511	A	A1S	Potri.002G246700	Potri.002G246700(AS)	POPTR_0002s24810	sp|O44017|ERD2_ENTHI	ER lumen protein retaining receptor OS=Entamoeba histolytica GN=ERD2 PE=3 SV=1	AT3G25160.1	| Symbols: | ER lumen protein retaining receptor family protein | chr3:9160337-9162023 REVERSE LENGTH=272	LOC_Os08g43470.1	protein|ER lumen protein retaining receptor, putative, expressed	IMGA|contig_77467_1.1	ER lumen retaining receptor family-like protein contig_77467 210-1675 H PREDN 20111014	GO:0006621|protein retention in ER lumen GO:0015031|protein transport	GO:0004872|receptor activity GO:0046923|ER retention sequence binding	GO:0005739|mitochondrion GO:0016021|integral to membrane
pt2_07512	A	A1S	Potri.002G246800	Potri.002G246800(AS)	POPTR_0002s24820	sp|Q9FJK7|CCC12_ARATH	Cyclin-C1-2 OS=Arabidopsis thaliana GN=CYCC1-2 PE=2 SV=1	AT5G48630.1	| Symbols: | Cyclin family protein | chr5:19721663-19723200 REVERSE LENGTH=253	LOC_Os09g32680.1	protein|cyclin, putative, expressed	NA	NA	GO:0000079|regulation of cyclin-dependent protein kinase activity GO:0006355|regulation of transcription, DNA-dependent GO:0010440|stomatal lineage progression GO:0051726|regulation of cell cycle	GO:0004693|cyclin-dependent protein kinase activity GO:0019901|protein kinase binding	GO:0005634|nucleus GO:0016591|DNA-directed RNA polymerase II, holoenzyme
pt2_07513	A	A1S	Potri.002G246900	Potri.002G246900(AS)	POPTR_0002s24830	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07514	C	C1S	Potri.002G247000	Potri.002G247000(CS)	NA	NA	AT1G43722.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). | chr1:16496403-16497377 FORWARD LENGTH=324	LOC_Os06g37830.1	protein|transposon protein, putative, CACTA, En/Spm sub-class, expressed	IMGA|Medtr1g059320.1	hypothetical protein chr1 15361664-15360985 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07515	A	A2S	Potri.002G247100	Potri.002G247100(AS) Potri.014G195000(DS)	POPTR_0002s24850	sp|Q94465|GCH1_DICDI	GTP cyclohydrolase 1 OS=Dictyostelium discoideum GN=gchA PE=1 SV=2	AT3G07270.1	| Symbols: | GTP cyclohydrolase I | chr3:2315451-2317059 FORWARD LENGTH=466	LOC_Os04g56710.1	protein|GTP cyclohydrolase I 1, putative, expressed	NA	NA	GO:0009058|biosynthetic process GO:0046654|tetrahydrofolate biosynthetic process	GO:0003934|GTP cyclohydrolase I activity	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_07516	A	A3S	Potri.002G247200	Potri.002G247200(AS) Potri.002G247300(BS) Potri.018G015000(DS)	POPTR_0002s24860	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07517	A	A3S	Potri.002G247300	Potri.002G247300(AS) Potri.002G247200(BS) Potri.018G015000(DS)	POPTR_0002s24870	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07518	A	A1S	Potri.002G247400	Potri.002G247400(AS)	POPTR_0002s24880	NA	NA	AT4G13030.2	| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr4:7607400-7609656 FORWARD LENGTH=479	LOC_Os05g19280.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07519	A	A1S	Potri.002G247500	Potri.002G247500(AS)	POPTR_0002s24890	sp|P43294|MHK_ARATH	Serine/threonine-protein kinase MHK OS=Arabidopsis thaliana GN=MHK PE=2 SV=2	AT4G13020.1	| Symbols: MHK | Protein kinase superfamily protein | chr4:7603947-7606812 FORWARD LENGTH=435	LOC_Os03g63020.3	protein|protein kinase domain containing protein, expressed	IMGA|Medtr5g026960.1	Serine/threonine protein kinase ICK chr5 10917762-10923315 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0045727|positive regulation of translation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus
pt2_07520	A	A1S	Potri.002G247500	Potri.002G247500(AS)	POPTR_0002s24890	sp|P43294|MHK_ARATH	Serine/threonine-protein kinase MHK OS=Arabidopsis thaliana GN=MHK PE=2 SV=2	AT4G13020.1	| Symbols: MHK | Protein kinase superfamily protein | chr4:7603947-7606812 FORWARD LENGTH=435	LOC_Os03g63020.3	protein|protein kinase domain containing protein, expressed	IMGA|Medtr5g026960.1	Serine/threonine protein kinase ICK chr5 10917762-10923315 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0045727|positive regulation of translation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus
pt2_07521	C	C1S	Potri.002G247500	Potri.002G247500(CS)	sp|P43294|MHK_ARATH	Serine/threonine-protein kinase MHK OS=Arabidopsis thaliana GN=MHK PE=2 SV=2	AT4G13020.1	| Symbols: MHK | Protein kinase superfamily protein | chr4:7603947-7606812 FORWARD LENGTH=435	LOC_Os03g63020.3	protein|protein kinase domain containing protein, expressed	IMGA|Medtr5g026960.1	Serine/threonine protein kinase ICK chr5 10917762-10923315 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0045727|positive regulation of translation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus
pt2_07522	A	A1S	Potri.002G247600	Potri.002G247600(AS)	POPTR_0002s24900	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07523	A	A1S	Potri.002G247700	Potri.002G247700(AS)	POPTR_0002s24910	NA	NA	AT3G07310.1	| Symbols: | Protein of unknown function (DUF760) | chr3:2328057-2329677 REVERSE LENGTH=368	LOC_Os11g26890.2	protein|expressed protein	IMGA|Medtr5g028020.1	hypothetical protein chr5 11461564-11465157 F EGN_Mt100125 20111014	GO:0008150|biological_process GO:0009740|gibberellic acid mediated signaling pathway GO:0010162|seed dormancy process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_07524	A	A1S	Potri.002G247800	Potri.002G247800(AS)	POPTR_0002s24920	sp|Q06915|EA6_ARATH	Probable glucan endo-1,3-beta-glucosidase A6 OS=Arabidopsis thaliana GN=A6 PE=2 SV=1	AT3G07320.1	| Symbols: | O-Glycosyl hydrolases family 17 protein | chr3:2332324-2333925 REVERSE LENGTH=460	LOC_Os09g32550.2	protein|glucan endo-1,3-beta-glucosidase precursor, putative, expressed	IMGA|Medtr5g085580.1	"Glucan endo-1,3-beta-glucosidase" chr5 35975309-35973056 F EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0043169|cation binding	GO:0005886|plasma membrane GO:0009505|plant-type cell wall GO:0009506|plasmodesma
pt2_07525	A	A1S	Potri.002G247900	Potri.002G247900(AS)	POPTR_0002s24930	sp|Q06915|EA6_ARATH	Probable glucan endo-1,3-beta-glucosidase A6 OS=Arabidopsis thaliana GN=A6 PE=2 SV=1	AT3G07320.1	| Symbols: | O-Glycosyl hydrolases family 17 protein | chr3:2332324-2333925 REVERSE LENGTH=460	LOC_Os09g32550.2	protein|glucan endo-1,3-beta-glucosidase precursor, putative, expressed	IMGA|Medtr5g085580.1	"Glucan endo-1,3-beta-glucosidase" chr5 35975309-35973056 F EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0043169|cation binding	GO:0005886|plasma membrane GO:0009505|plant-type cell wall GO:0009506|plasmodesma
pt2_07526	A	A1A	Potri.002G248000	Potri.002G248000(AA)	POPTR_0002s24940	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07527	A	A1S	Potri.002G248100	Potri.002G248100(AS)	POPTR_0002s24950	sp|Q9LSF5|PP254_ARATH	Pentatricopeptide repeat-containing protein At3g25210, mitochondrial OS=Arabidopsis thaliana GN=At3g25210 PE=2 SV=1	AT3G25210.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:9180348-9181487 FORWARD LENGTH=379	LOC_Os06g08570.1	protein|PPR repeat domain containing protein, putative, expressed	IMGA|Medtr1g095880.1	Pentatricopeptide repeat-containing protein chr1 27567477-27561633 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_07528	A	A1S	Potri.002G248200	Potri.002G248200(AS)	POPTR_0002s24960	sp|Q38936|FK152_ARATH	Peptidyl-prolyl cis-trans isomerase FKBP15-2 OS=Arabidopsis thaliana GN=FKBP15-2 PE=2 SV=2	AT5G48580.1	| Symbols: FKBP15-2 | FK506- and rapamycin-binding protein 15 kD-2 | chr5:19696156-19697304 REVERSE LENGTH=163	LOC_Os01g68710.2	protein|peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed	IMGA|Medtr5g008680.1	FK506-binding protein chr5 1630949-1635538 F EGN_Mt100125 20111014	GO:0000413|protein peptidyl-prolyl isomerization GO:0006457|protein folding GO:0018208|peptidyl-proline modification GO:0019932|second-messenger-mediated signaling	GO:0003755|peptidyl-prolyl cis-trans isomerase activity GO:0005528|FK506 binding	GO:0005773|vacuole GO:0005783|endoplasmic reticulum GO:0005794|Golgi apparatus GO:0005829|cytosol GO:0009507|chloroplast GO:0009543|chloroplast thylakoid lumen GO:0016020|membrane
pt2_07529	A	A1S	Potri.002G248300	Potri.002G248300(AS)	POPTR_0002s24970	sp|Q38931|FKB62_ARATH	Peptidyl-prolyl cis-trans isomerase FKBP62 OS=Arabidopsis thaliana GN=FKBP62 PE=1 SV=2	AT3G25230.1	| Symbols: ROF1, ATFKBP62, FKBP62 | rotamase FKBP 1 | chr3:9188257-9191137 FORWARD LENGTH=551	LOC_Os08g41390.2	protein|peptidyl-prolyl isomerase, putative, expressed	IMGA|Medtr1g017870.1	70 kDa peptidyl-prolyl isomerase chr1 5194150-5200002 E EGN_Mt100125 20111014	GO:0000413|protein peptidyl-prolyl isomerization GO:0006457|protein folding GO:0006499|N-terminal protein myristoylation GO:0009408|response to heat GO:0009611|response to wounding GO:0009644|response to high light intensity GO:0018208|peptidyl-proline modification GO:0034976|response to endoplasmic reticulum stress GO:0042542|response to hydrogen peroxide GO:0046686|response to cadmium ion GO:0070370|cellular heat acclimation	GO:0003755|peptidyl-prolyl cis-trans isomerase activity GO:0005515|protein binding GO:0005516|calmodulin binding GO:0005528|FK506 binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol GO:0016020|membrane
pt2_07530	A	A1S	Potri.002G248400	Potri.002G248400(AS)	POPTR_0002s24980	sp|Q9SRT3|CSLC6_ARATH	Probable xyloglucan glycosyltransferase 6 OS=Arabidopsis thaliana GN=CSLC6 PE=1 SV=1	AT3G07330.1	| Symbols: ATCSLC06, CSLC06, ATCSLC6, CSLC6 | Cellulose-synthase-like C6 | chr3:2336121-2338942 REVERSE LENGTH=682	LOC_Os05g43530.1	protein|CSLC7 - cellulose synthase-like family C, expressed	NA	NA	GO:0009932|cell tip growth GO:0016051|carbohydrate biosynthetic process GO:0030243|cellulose metabolic process GO:0048765|root hair cell differentiation GO:0048868|pollen tube development	GO:0016757|transferase activity, transferring glycosyl groups GO:0016759|cellulose synthase activity	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_07531	A	A1S	Potri.002G248500	Potri.002G248500(AS)	POPTR_0002s24990	sp|Q9SRT2|BH062_ARATH	Transcription factor bHLH62 OS=Arabidopsis thaliana GN=BHLH62 PE=2 SV=1	AT3G07340.1	| Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr3:2341188-2343288 REVERSE LENGTH=456	LOC_Os01g68700.2	protein|BHLH transcription factor, putative, expressed	IMGA|contig_61564_1.1	BHLH transcription factor contig_61564 6268-1844 E PREDN 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_07532	A	A1S	Potri.002G248600	Potri.002G248600(AS)	POPTR_0002s25000	sp|Q9SRT0|PUB9_ARATH	U-box domain-containing protein 9 OS=Arabidopsis thaliana GN=PUB9 PE=1 SV=1	AT3G07360.1	| Symbols: PUB9, ATPUB9 | plant U-box 9 | chr3:2354884-2356613 FORWARD LENGTH=460	LOC_Os02g28720.1	protein|spotted leaf 11, putative, expressed	IMGA|Medtr1g079450.1	U-box domain-containing protein chr1 19803846-19801680 H EGN_Mt100125 20111014	GO:0016567|protein ubiquitination GO:0046777|protein autophosphorylation GO:0071215|cellular response to abscisic acid stimulus	GO:0004842|ubiquitin-protein ligase activity GO:0070696|transmembrane receptor protein serine/threonine kinase binding	GO:0000151|ubiquitin ligase complex GO:0005634|nucleus GO:0005737|cytoplasm GO:0005886|plasma membrane
pt2_07533	A	A1S	Potri.002G248700	Potri.002G248700(AS)	POPTR_0002s25020	sp|Q9SRS9|CHIP_ARATH	E3 ubiquitin-protein ligase CHIP OS=Arabidopsis thaliana GN=CHIP PE=1 SV=1	AT3G07370.1	| Symbols: ATCHIP, CHIP | carboxyl terminus of HSC70-interacting protein | chr3:2358323-2360301 REVERSE LENGTH=278	LOC_Os05g01460.1	protein|STIP1 homology and U box-containing protein 1, putative, expressed	IMGA|contig_49679_2.1	U-box domain-containing protein contig_49679 4807-2474 E PREDN 20111014	GO:0007165|signal transduction GO:0009266|response to temperature stimulus GO:0009408|response to heat GO:0009414|response to water deprivation GO:0009610|response to symbiotic fungus GO:0009611|response to wounding GO:0009651|response to salt stress GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009753|response to jasmonic acid stimulus GO:0016567|protein ubiquitination GO:0042538|hyperosmotic salinity response	GO:0004842|ubiquitin-protein ligase activity GO:0051087|chaperone binding	GO:0000151|ubiquitin ligase complex GO:0005737|cytoplasm
pt2_07534	A	A1S	Potri.002G248800	Potri.002G248800(AS)	POPTR_0002s25030	sp|Q11066|YHI2_MYCTU	Uncharacterized HIT-like protein Rv1262c/MT1300 OS=Mycobacterium tuberculosis GN=Rv1262c PE=4 SV=2	AT5G48545.1	| Symbols: HINT3 | histidine triad nucleotide-binding 3 | chr5:19676228-19677945 FORWARD LENGTH=197	LOC_Os11g18990.1	protein|histidine triad family protein, putative, expressed	NA	NA	GO:0006790|sulfur compound metabolic process GO:0009150|purine ribonucleotide metabolic process	GO:0003824|catalytic activity GO:0047627|adenylylsulfatase activity	GO:0005634|nucleus GO:0005777|peroxisome
pt2_07535	A	A1S	Potri.002G248900	Potri.002G248900(AS)	POPTR_0002s25040	sp|Q9LSF1|OXI1_ARATH	Serine/threonine-protein kinase OXI1 OS=Arabidopsis thaliana GN=OXI1 PE=1 SV=1	AT3G25250.1	| Symbols: AGC2-1, AGC2, OXI1, AtOXI1 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein | chr3:9195566-9196949 FORWARD LENGTH=421	LOC_Os08g39460.1	protein|AGC_PVPK_like_CDK8.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed	IMGA|Medtr5g069000.1	Microtubule-associated serine/threonine-protein kinase chr5 28211794-28220768 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006979|response to oxidative stress GO:0009611|response to wounding GO:0010200|response to chitin	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005515|protein binding GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0019901|protein kinase binding	NA
pt2_07536	A	A2S	Potri.002G249000	Potri.002G249000(AS) Potri.014G191000(DS)	POPTR_0002s25050	sp|P49211|RL321_ARATH	60S ribosomal protein L32-1 OS=Arabidopsis thaliana GN=RPL32A PE=2 SV=2	AT4G18100.1	| Symbols: | Ribosomal protein L32e | chr4:10035715-10036475 REVERSE LENGTH=133	LOC_Os09g32532.1	protein|60S ribosomal protein L32, putative, expressed	NA	NA	GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005730|nucleolus GO:0005737|cytoplasm GO:0005829|cytosol GO:0005840|ribosome GO:0022625|cytosolic large ribosomal subunit GO:0022626|cytosolic ribosome
pt2_07537	A	A1S	Potri.002G249100	Potri.002G249100(AS)	POPTR_0002s25060	sp|Q9LSE8|PTR35_ARATH	Putative peptide/nitrate transporter At3g25280 OS=Arabidopsis thaliana GN=At3g25280 PE=1 SV=1	AT3G25280.1	| Symbols: | Major facilitator superfamily protein | chr3:9206183-9208036 FORWARD LENGTH=521	LOC_Os06g38294.1	protein|peptide transporter PTR2, putative, expressed	IMGA|Medtr5g038380.1	Nitrate transporter NTL1 chr5 16398082-16404412 E EGN_Mt100125 20111014	GO:0006857|oligopeptide transport GO:0006863|purine nucleobase transport	GO:0005215|transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_07538	A	A1S	Potri.002G249200	Potri.002G249200(AS)	POPTR_0002s25070	sp|Q94BT2|AIR12_ARATH	Auxin-induced in root cultures protein 12 OS=Arabidopsis thaliana GN=AIR12 PE=1 SV=3	AT3G07390.1	| Symbols: AIR12 | auxin-responsive family protein | chr3:2365452-2366273 FORWARD LENGTH=273	LOC_Os08g41290.1	protein|AIR12, putative, expressed	IMGA|Medtr5g093520.1	Dopamine beta-monooxygenase chr5 39801088-39798194 E EGN_Mt100125 20111014	GO:0006007|glucose catabolic process GO:0009733|response to auxin stimulus GO:0010102|lateral root morphogenesis GO:0030198|extracellular matrix organization	GO:0005201|extracellular matrix structural constituent	GO:0005576|extracellular region GO:0005886|plasma membrane GO:0031225|anchored to membrane GO:0046658|anchored to plasma membrane
pt2_07539	A	A1S	Potri.002G249300	Potri.002G249300(AS)	POPTR_0002s25080	sp|Q94BT2|AIR12_ARATH	Auxin-induced in root cultures protein 12 OS=Arabidopsis thaliana GN=AIR12 PE=1 SV=3	AT3G25290.2	| Symbols: | Auxin-responsive family protein | chr3:9208955-9210353 FORWARD LENGTH=393	LOC_Os03g09900.1	protein|membrane protein, putative, expressed	IMGA|Medtr5g093520.1	Dopamine beta-monooxygenase chr5 39801088-39798194 E EGN_Mt100125 20111014	GO:0007275|multicellular organismal development	NA	GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0009507|chloroplast GO:0016020|membrane GO:0016021|integral to membrane
pt2_07540	A	A1S	Potri.002G249400	Potri.002G249400(AS)	POPTR_0002s25090	NA	NA	AT3G07400.1	| Symbols: | lipase class 3 family protein | chr3:2367456-2372238 FORWARD LENGTH=1003	LOC_Os02g28040.1	protein|lipase, putative, expressed	NA	NA	GO:0006629|lipid metabolic process	GO:0004806|triglyceride lipase activity	NA
pt2_07541	A	A1S	Potri.002G249500	Potri.002G249500(AS)	POPTR_0002s25100	sp|P19892|RAA5E_ARATH	Ras-related protein RABA5e OS=Arabidopsis thaliana GN=RABA5E PE=2 SV=1	AT1G05810.1	| Symbols: ARA, ARA-1, ATRAB11D, ATRABA5E, RABA5E | RAB GTPase homolog A5E | chr1:1748314-1749350 FORWARD LENGTH=261	LOC_Os08g41340.1	protein|ras-related protein, putative, expressed	IMGA|contig_80534_1.1	Ras-related protein Rab-25 contig_80534 213-2592 E PREDN 20111014	GO:0007264|small GTPase mediated signal transduction GO:0015031|protein transport	GO:0005525|GTP binding	NA
pt2_07542	A	A2S	Potri.002G249600	Potri.002G249600(AS) Potri.002G249700(AA)	POPTR_0002s25110	sp|Q9LV60|CRR55_ARATH	Cysteine-rich repeat secretory protein 55 OS=Arabidopsis thaliana GN=CRRSP55 PE=2 SV=1	AT5G48540.1	| Symbols: | receptor-like protein kinase-related family protein | chr5:19669096-19669887 REVERSE LENGTH=263	LOC_Os03g16950.1	protein|cysteine-rich repeat secretory protein 55 precursor, putative, expressed	IMGA|Medtr5g005480.1	Cysteine-rich receptor-like protein kinase chr5 237446-232042 E EGN_Mt100125 20111014	GO:0080167|response to karrikin	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_07543	A	A1S	Potri.002G249700	Potri.002G249700(AS)	POPTR_0002s25120	sp|Q9SW95|SYNC2_ARATH	Asparagine--tRNA ligase, cytoplasmic 2 OS=Arabidopsis thaliana GN=SYNC2 PE=2 SV=2	AT3G07420.1	| Symbols: NS2, ATNS2, SYNC2_ARATH, SYNC2 | asparaginyl-tRNA synthetase 2 | chr3:2374179-2376644 REVERSE LENGTH=638	LOC_Os01g27520.1	protein|tRNA synthetases class II domain containing protein, expressed	NA	NA	GO:0006418|tRNA aminoacylation for protein translation GO:0006421|asparaginyl-tRNA aminoacylation	GO:0000166|nucleotide binding GO:0004812|aminoacyl-tRNA ligase activity GO:0004816|asparagine-tRNA ligase activity GO:0005524|ATP binding	GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_07544	A	A1S	Potri.002G249800	Potri.002G249800(AS)	POPTR_0002s25130	NA	NA	AT3G56860.5	| Symbols: UBA2A | UBP1-associated protein 2A | chr3:21050708-21052144 REVERSE LENGTH=478	NA	NA	IMGA|Medtr5g088220.1	Heterogeneous nuclear ribonucleoprotein D0 chr5 37214495-37212096 F EGN_Mt100125 20111014	GO:0006952|defense response GO:0008219|cell death GO:0009693|ethylene biosynthetic process GO:0009738|abscisic acid mediated signaling pathway GO:0010150|leaf senescence GO:0048255|mRNA stabilization	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding GO:0005515|protein binding GO:0017091|AU-rich element binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol
pt2_07545	A	A1S	Potri.002G249900	Potri.002G249900(AS)	POPTR_0002s25140	sp|Q9SV72|EPFL9_ARATH	EPIDERMAL PATTERNING FACTOR-like protein 9 OS=Arabidopsis thaliana GN=EPFL9 PE=3 SV=1	AT4G12970.1	| Symbols: STOMAGEN, EPFL9 | stomagen | chr4:7586244-7586798 REVERSE LENGTH=102	LOC_Os01g68598.2	protein|expressed protein	NA	NA	GO:0007267|cell-cell signaling GO:0010375|stomatal complex patterning GO:0016556|mRNA modification GO:2000038|regulation of stomatal complex development GO:2000123|positive regulation of stomatal complex development	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_07546	A	A1S	Potri.002G250000	Potri.002G250000(AS)	POPTR_0002s25150	sp|Q91VC0|DCTP1_RAT	dCTP pyrophosphatase 1 OS=Rattus norvegicus GN=Dctpp1 PE=2 SV=1	AT3G25400.1	| Symbols: | CONTAINS InterPro DOMAIN/s: NTP Pyrophosphohydrolase MazG-related, RS21-C6 (InterPro:IPR011394), EAR (InterPro:IPR009039), NTP pyrophosphohydrolase MazG, putative catalytic core (InterPro:IPR004518); Has 1123 Blast hits to 1121 proteins in 452 species: Archae - 22; Bacteria - 753; Metazoa - 81; Fungi - 3; Plants - 83; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). | chr3:9213236-9214144 FORWARD LENGTH=141	LOC_Os02g27810.1	protein|MazG nucleotide pyrophosphohydrolase domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_07547	A	A1S	Potri.002G250100	Potri.002G250100(AS)	POPTR_0002s25160	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	GO:0005739|mitochondrion
pt2_07548	A	A1S	Potri.002G250200	Potri.002G250200(AS)	POPTR_0002s25170	NA	NA	AT4G27990.1	| Symbols: YLMG1-2, ATYLMG1-2 | YGGT family protein | chr4:13923991-13924647 REVERSE LENGTH=218	LOC_Os07g08770.1	protein|YGGT family protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009941|chloroplast envelope GO:0016020|membrane
pt2_07549	A	A1S	Potri.002G250300	Potri.002G250300(AS)	POPTR_0002s25180	NA	NA	NA	NA	NA	NA	NA	NA	GO:0080167|response to karrikin	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_07550	A	A1S	Potri.002G250400	Potri.002G250400(AS)	POPTR_0002s25190	sp|Q6P7N4|CC037_XENTR	UPF0361 protein C3orf37 homolog OS=Xenopus tropicalis GN=TGas027m07.1 PE=2 SV=1	AT2G26470.1	| Symbols: | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF159 (InterPro:IPR003738); Has 3646 Blast hits to 3636 proteins in 1001 species: Archae - 41; Bacteria - 1922; Metazoa - 142; Fungi - 125; Plants - 44; Viruses - 14; Other Eukaryotes - 1358 (source: NCBI BLink). | chr2:11259316-11262362 REVERSE LENGTH=487	LOC_Os06g27650.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_07551	A	A1S	Potri.002G250500	Potri.002G250500(AS)	POPTR_0002s25200	NA	NA	AT3G07440.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G48530.1); Has 37 Blast hits to 37 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr3:2381411-2382902 FORWARD LENGTH=235	LOC_Os02g27740.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_07552	A	A1S	Potri.002G250700	Potri.002G250700(AS)	POPTR_0002s25210	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_07553	A	A1S	Potri.002G250800	Potri.002G250800(AS)	POPTR_0002s25220	NA	NA	AT5G48500.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:19653235-19654017 FORWARD LENGTH=167	NA	NA	NA	NA	GO:0080167|response to karrikin	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_07554	A	A1S	Potri.002G250900	Potri.002G250900(AS)	POPTR_0002s25230	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07555	A	A1S	Potri.002G251000	Potri.002G251000(AS)	POPTR_0002s25240	sp|Q8W453|DIR1_ARATH	Putative lipid-transfer protein DIR1 OS=Arabidopsis thaliana GN=DIR1 PE=1 SV=1	AT5G48485.1	| Symbols: DIR1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr5:19646317-19646625 REVERSE LENGTH=102	LOC_Os07g18990.1	protein|LTPL40 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	IMGA|contig_66158_1.1	PVR3-like protein contig_66158 747-224 F PREDN 20111014	GO:0006869|lipid transport GO:0009627|systemic acquired resistance GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway	GO:0005319|lipid transporter activity GO:0005504|fatty acid binding GO:0008270|zinc ion binding GO:0008289|lipid binding	GO:0005576|extracellular region
pt2_07556	C	C1S	Potri.002G251100	Potri.002G251100(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07557	A	A1S	Potri.002G251200	Potri.002G251200(AS)	POPTR_0002s25260	sp|Q9LV66|Y5848_ARATH	Uncharacterized protein At5g48480 OS=Arabidopsis thaliana GN=At5g48480 PE=1 SV=1	AT5G48480.1	| Symbols: | Lactoylglutathione lyase / glyoxalase I family protein | chr5:19644814-19645658 FORWARD LENGTH=166	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_07558	A	A1S	Potri.002G251300	Potri.002G251300(AS)	POPTR_0002s25270	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006468|protein phosphorylation GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_07559	B	B1S	Potri.002G251400	Potri.002G251400(BS)	POPTR_0002s25280	NA	NA	AT5G48470.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:19641810-19644127 FORWARD LENGTH=397	LOC_Os11g23790.2	protein|expressed protein	IMGA|Medtr1g007490.1	hypothetical protein chr1 966102-969644 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_07560	C	C1S	Potri.002G251400	Potri.002G251400(CS)	NA	NA	AT5G48470.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:19641810-19644127 FORWARD LENGTH=397	LOC_Os11g23790.2	protein|expressed protein	IMGA|Medtr1g007490.1	hypothetical protein chr1 966102-969644 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_07561	A	A1S	Potri.002G251400	Potri.002G251400(AS)	POPTR_0002s25280	NA	NA	AT5G48470.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:19641810-19644127 FORWARD LENGTH=397	LOC_Os11g23790.2	protein|expressed protein	IMGA|Medtr1g007490.1	hypothetical protein chr1 966102-969644 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_07562	A	A1S	Potri.002G251600	Potri.002G251600(AS)	POPTR_0002s25290	sp|Q9FKI0|FIMB2_ARATH	Fimbrin-like protein 2 OS=Arabidopsis thaliana GN=FIM2 PE=2 SV=1	AT5G48460.1	| Symbols: | Actin binding Calponin homology (CH) domain-containing protein | chr5:19636225-19639365 REVERSE LENGTH=654	LOC_Os02g48740.1	protein|fimbrin-like protein 2, putative, expressed	IMGA|Medtr5g098130.1	Fimbrin/plastin-like protein chr5 41927334-41933879 E EGN_Mt100125 20111014	GO:0008150|biological_process GO:0051645|Golgi localization GO:0051646|mitochondrion localization GO:0060151|peroxisome localization	GO:0003779|actin binding	GO:0005737|cytoplasm
pt2_07563	A	A1S	Potri.002G251700	Potri.002G251700(AS)	POPTR_0002s25300	sp|P33543|TMKL1_ARATH	Putative kinase-like protein TMKL1 OS=Arabidopsis thaliana GN=TMKL1 PE=1 SV=1	AT3G24660.1	| Symbols: TMKL1 | transmembrane kinase-like 1 | chr3:9003641-9005751 FORWARD LENGTH=674	LOC_Os08g45060.1	protein|protein Kinase-like protein TMKL1 precursor, putative, expressed	IMGA|Medtr5g083480.1	Receptor-like kinase chr5 35014725-35012170 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway GO:0009855|determination of bilateral symmetry GO:0009944|polarity specification of adaxial/abaxial axis GO:0010014|meristem initiation GO:0010073|meristem maintenance GO:0010075|regulation of meristem growth	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_07564	A	A1S	Potri.002G251800	Potri.002G251800(AS)	POPTR_0002s25310	NA	NA	AT4G13220.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 27 Blast hits to 27 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:7674431-7675275 REVERSE LENGTH=176	LOC_Os12g17830.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_07565	A	A1S	Potri.002G251800	Potri.002G251800(AS)	POPTR_0002s25310	NA	NA	AT4G13220.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 27 Blast hits to 27 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:7674431-7675275 REVERSE LENGTH=176	LOC_Os12g17830.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_07566	A	A1S	Potri.002G251900	Potri.002G251900(AS)	POPTR_0002s25320	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07567	A	A1S	Potri.002G252000	Potri.002G252000(AS)	POPTR_0002s25330	sp|Q01593|ABI3_ARATH	B3 domain-containing transcription factor ABI3 OS=Arabidopsis thaliana GN=ABI3 PE=1 SV=1	AT3G24650.1	| Symbols: ABI3, SIS10 | AP2/B3-like transcriptional factor family protein | chr3:8997911-9000780 FORWARD LENGTH=720	LOC_Os01g68370.3	protein|B3 DNA binding domain containing protein, expressed	IMGA|Medtr5g075410.1	B3 domain-containing transcription repressor VAL2 chr5 31062764-31057534 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009657|plastid organization GO:0009686|gibberellin biosynthetic process GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009740|gibberellic acid mediated signaling pathway GO:0009790|embryo development GO:0016114|terpenoid biosynthetic process GO:0031930|mitochondria-nucleus signaling pathway GO:0045893|positive regulation of transcription, DNA-dependent GO:0048825|cotyledon development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus GO:0005829|cytosol
pt2_07568	A	A1S	Potri.002G252100	Potri.002G252100(AS)	POPTR_0002s25340	sp|Q8LFD5|Y4323_ARATH	Uncharacterized protein At4g13230 OS=Arabidopsis thaliana GN=At4g13230 PE=2 SV=1	AT4G13230.1	| Symbols: | Late embryogenesis abundant protein (LEA) family protein | chr4:7675841-7676629 REVERSE LENGTH=120	NA	NA	NA	NA	GO:0009793|embryo development ending in seed dormancy	GO:0003674|molecular_function	NA
pt2_07569	A	A1S	Potri.002G252200	Potri.002G252200(AS)	POPTR_0002s25350	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process GO:0010075|regulation of meristem growth	GO:0003674|molecular_function	NA
pt2_07570	A	A1S	Potri.002G252300	Potri.002G252300(AS)	POPTR_0002s25360	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07571	A	A1S	Potri.002G252400	Potri.002G252400(AS)	POPTR_0002s25370	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07572	A	A1S	Potri.002G252500	Potri.002G252500(AS)	POPTR_0002s25380	NA	NA	AT4G16295.1	| Symbols: SPH1 | S-protein homologue 1 | chr4:9215680-9216135 REVERSE LENGTH=151	NA	NA	NA	NA	GO:0009875|pollen-pistil interaction	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_07573	A	A2S	Potri.002G252600	Potri.002G252600(AS) Potri.014G194700(BS)	POPTR_0002s25390	sp|Q9SZD4|PRS4A_ARATH	26S proteasome regulatory subunit 4 homolog A OS=Arabidopsis thaliana GN=RPT2A PE=2 SV=1	AT4G29040.1	| Symbols: RPT2a | regulatory particle AAA-ATPase 2A | chr4:14312369-14314386 FORWARD LENGTH=443	LOC_Os03g18690.1	protein|26S protease regulatory subunit 4, putative, expressed	IMGA|Medtr1g083330.1	26S protease regulatory subunit 6A-like protein chr1 21592984-21597408 F EGN_Mt100125 20111014	GO:0006094|gluconeogenesis GO:0006096|glycolysis GO:0006499|N-terminal protein myristoylation GO:0006511|ubiquitin-dependent protein catabolic process GO:0006635|fatty acid beta-oxidation GO:0007292|female gamete generation GO:0009407|toxin catabolic process GO:0009408|response to heat GO:0009651|response to salt stress GO:0009853|photorespiration GO:0009933|meristem structural organization GO:0009965|leaf morphogenesis GO:0010015|root morphogenesis GO:0010078|maintenance of root meristem identity GO:0010311|lateral root formation GO:0035266|meristem growth GO:0042023|DNA endoreduplication GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0043248|proteasome assembly GO:0046686|response to cadmium ion GO:0048232|male gamete generation GO:0048364|root development GO:0048367|shoot development GO:0048827|phyllome development GO:0048829|root cap development GO:0051510|regulation of unidimensional cell growth GO:0051788|response to misfolded protein GO:0060968|regulation of gene silencing GO:0080129|proteasome core complex assembly GO:0090351|seedling development	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016787|hydrolase activity GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity	GO:0000502|proteasome complex GO:0005634|nucleus GO:0005737|cytoplasm GO:0008540|proteasome regulatory particle, base subcomplex GO:0016020|membrane
pt2_07574	A	A1S	Potri.002G252700	Potri.002G252700(AS)	POPTR_0002s25400	NA	NA	AT4G28820.2	| Symbols: | HIT-type Zinc finger family protein | chr4:14230815-14232287 REVERSE LENGTH=172	NA	NA	NA	NA	GO:0008150|biological_process GO:0009560|embryo sac egg cell differentiation	NA	GO:0005634|nucleus
pt2_07575	A	A1S	Potri.002G252700	Potri.002G252700(AS)	POPTR_0002s25400	NA	NA	AT4G28820.2	| Symbols: | HIT-type Zinc finger family protein | chr4:14230815-14232287 REVERSE LENGTH=172	NA	NA	NA	NA	GO:0008150|biological_process GO:0009560|embryo sac egg cell differentiation	NA	GO:0005634|nucleus
pt2_07576	A	A1S	Potri.002G252700	Potri.002G252700(AS)	POPTR_0002s25400	NA	NA	AT4G28820.2	| Symbols: | HIT-type Zinc finger family protein | chr4:14230815-14232287 REVERSE LENGTH=172	NA	NA	NA	NA	GO:0008150|biological_process GO:0009560|embryo sac egg cell differentiation	NA	GO:0005634|nucleus
pt2_07577	A	A1S	Potri.002G252800	Potri.002G252800(AS)	POPTR_0002s25410	sp|Q8GZM7|PIF1_ARATH	Transcription factor PIF1 OS=Arabidopsis thaliana GN=PIF1 PE=1 SV=1	AT2G20180.3	| Symbols: PIL5 | phytochrome interacting factor 3-like 5 | chr2:8704276-8706538 REVERSE LENGTH=478	LOC_Os03g56950.7	protein|phytochrome-interacting factor 4, putative, expressed	IMGA|Medtr5g017040.1	Transcription factor SPATULA chr5 5918843-5921342 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006783|heme biosynthetic process GO:0009686|gibberellin biosynthetic process GO:0009740|gibberellic acid mediated signaling pathway GO:0009845|seed germination GO:0009959|negative gravitropism GO:0010029|regulation of seed germination GO:0010099|regulation of photomorphogenesis GO:0010100|negative regulation of photomorphogenesis GO:0010161|red light signaling pathway GO:0010187|negative regulation of seed germination GO:0015995|chlorophyll biosynthetic process GO:0048608|reproductive structure development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0010313|phytochrome binding GO:0042802|identical protein binding	GO:0005634|nucleus
pt2_07578	A	A1S	Potri.002G252900	Potri.002G252900(AS)	POPTR_0002s25420	sp|Q05046|CH62_CUCMA	Chaperonin CPN60-2, mitochondrial OS=Cucurbita maxima GN=CPN60-2 PE=1 SV=1	AT3G23990.1	| Symbols: HSP60, HSP60-3B | heat shock protein 60 | chr3:8669013-8672278 FORWARD LENGTH=577	LOC_Os10g32550.1	protein|T-complex protein, putative, expressed	IMGA|Medtr1g090130.1	Chaperonin CPN60-2 chr1 24825922-24820135 F EGN_Mt100125 20111014	GO:0006457|protein folding GO:0006626|protein targeting to mitochondrion GO:0007005|mitochondrion organization GO:0009408|response to heat GO:0009644|response to high light intensity GO:0034976|response to endoplasmic reticulum stress GO:0042026|protein refolding GO:0042542|response to hydrogen peroxide GO:0044267|cellular protein metabolic process GO:0046686|response to cadmium ion GO:0051131|chaperone-mediated protein complex assembly	GO:0005507|copper ion binding GO:0005524|ATP binding	GO:0005739|mitochondrion GO:0005759|mitochondrial matrix GO:0005774|vacuolar membrane GO:0005829|cytosol GO:0022626|cytosolic ribosome
pt2_07579	A	A1S	Potri.002G253000	Potri.002G253000(AS)	POPTR_0002s25430	sp|Q9M8Y4|ARR22_ARATH	Two-component response regulator ARR22 OS=Arabidopsis thaliana GN=ARR22 PE=2 SV=1	AT5G26594.1	| Symbols: ARR24, RR24 | response regulator 24 | chr5:9269282-9270254 FORWARD LENGTH=139	LOC_Os03g53100.1	protein|response regulator receiver domain containing protein, expressed	NA	NA	GO:0000160|two-component signal transduction system (phosphorelay) GO:0006355|regulation of transcription, DNA-dependent	GO:0000156|two-component response regulator activity	GO:0009507|chloroplast
pt2_07580	A	A1S	Potri.002G253100	Potri.002G253100(AS)	POPTR_0002s25440	NA	NA	NA	NA	NA	NA	NA	NA	GO:0000160|two-component signal transduction system (phosphorelay) GO:0006355|regulation of transcription, DNA-dependent	GO:0000156|two-component response regulator activity	GO:0009507|chloroplast
pt2_07581	A	A1S	Potri.002G253200	Potri.002G253200(AS)	POPTR_0002s25450	sp|A1A5G0|CLAP1_XENTR	CLIP-associating protein 1 OS=Xenopus tropicalis GN=clasp1 PE=1 SV=1	AT2G20190.1	| Symbols: ATCLASP, CLASP | CLIP-associated protein | chr2:8711862-8718813 REVERSE LENGTH=1439	LOC_Os04g42840.1	protein|HEAT repeat family protein, putative, expressed	IMGA|contig_52000_1.1	CLIP-associating protein-like protein contig_52000 7618-950 E PREDN 20111014	GO:0000271|polysaccharide biosynthetic process GO:0007067|mitosis GO:0009825|multidimensional cell growth GO:0009932|cell tip growth GO:0010817|regulation of hormone levels GO:0016049|cell growth GO:0030243|cellulose metabolic process GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0048767|root hair elongation GO:0050821|protein stabilization GO:0071555|cell wall organization	NA	GO:0005737|cytoplasm GO:0005876|spindle microtubule GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_07582	C	C4S	Potri.016G107600	Potri.016G107600(CS) Potri.018G010900(CS) Potri.002G253300(CS) Potri.001G184500(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07583	A	A1S	Potri.002G253400	Potri.002G253400(AS)	POPTR_0002s25470	sp|Q9SVU5|GDL67_ARATH	GDSL esterase/lipase At4g28780 OS=Arabidopsis thaliana GN=At4g28780 PE=2 SV=1	AT4G28780.1	| Symbols: | GDSL-like Lipase/Acylhydrolase superfamily protein | chr4:14215603-14217159 FORWARD LENGTH=367	LOC_Os02g40440.1	protein|GDSL-like lipase/acylhydrolase, putative, expressed	IMGA|Medtr1g079540.1	GDSL esterase/lipase chr1 19869495-19867635 E EGN_Mt100125 20111014	GO:0006629|lipid metabolic process GO:0010103|stomatal complex morphogenesis GO:0016556|mRNA modification	GO:0004091|carboxylesterase activity GO:0016788|hydrolase activity, acting on ester bonds	GO:0005576|extracellular region
pt2_07584	A	A1S	Potri.002G253500	Potri.002G253500(AS)	POPTR_0002s25480	NA	NA	AT2G20230.1	| Symbols: | Tetraspanin family protein | chr2:8725762-8727388 FORWARD LENGTH=270	LOC_Os06g51480.1	protein|expressed protein	IMGA|Medtr5g014080.3	GMFP4 chr5 4402853-4408473 F EGN_Mt100125 20111014	GO:0009627|systemic acquired resistance GO:0031347|regulation of defense response	NA	GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0016021|integral to membrane
pt2_07585	A	A1S	Potri.002G253600	Potri.002G253600(AS)	POPTR_0002s25490	NA	NA	AT4G28760.2	| Symbols: | Protein of unknown function (DUF3741) | chr4:14208640-14211811 FORWARD LENGTH=924	LOC_Os04g42770.5	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07586	A	A1S	Potri.002G253700	Potri.002G253700(AS)	POPTR_0002s25500	NA	NA	AT2G20240.1	| Symbols: | Protein of unknown function (DUF3741) | chr2:8727778-8730086 REVERSE LENGTH=713	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_07587	A	A1S	Potri.002G253800	Potri.002G253800(AS)	POPTR_0002s25510	NA	NA	NA	NA	NA	NA	NA	NA	GO:0015979|photosynthesis GO:0019684|photosynthesis, light reaction GO:0030003|cellular cation homeostasis GO:0070838|divalent metal ion transport	NA	GO:0009507|chloroplast GO:0009522|photosystem I GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009538|photosystem I reaction center GO:0009579|thylakoid GO:0009941|chloroplast envelope GO:0010287|plastoglobule
pt2_07588	A	A1S	Potri.002G253800	Potri.002G253800(AS)	POPTR_0002s25510	NA	NA	NA	NA	NA	NA	NA	NA	GO:0015979|photosynthesis GO:0019684|photosynthesis, light reaction GO:0030003|cellular cation homeostasis GO:0070838|divalent metal ion transport	NA	GO:0009507|chloroplast GO:0009522|photosystem I GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009538|photosystem I reaction center GO:0009579|thylakoid GO:0009941|chloroplast envelope GO:0010287|plastoglobule
pt2_07589	A	A1S	Potri.002G253900	Potri.002G253900(AS)	POPTR_0002s25520	sp|Q9ZW24|GSTU7_ARATH	Glutathione S-transferase U7 OS=Arabidopsis thaliana GN=GSTU7 PE=2 SV=1	AT2G29420.1	| Symbols: ATGSTU7, GST25, GSTU7 | glutathione S-transferase tau 7 | chr2:12618111-12618871 REVERSE LENGTH=227	LOC_Os09g29200.1	protein|glutathione S-transferase, putative, expressed	IMGA|Medtr5g040430.1	Glutathione S-transferase chr5 17366508-17368010 F EGN_Mt100125 20111014	GO:0009407|toxin catabolic process GO:0009751|response to salicylic acid stimulus GO:0010583|response to cyclopentenone	GO:0004364|glutathione transferase activity	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_07590	A	A1S	Potri.002G254000	Potri.002G254000(AS)	POPTR_0002s25530	sp|Q9ZW24|GSTU7_ARATH	Glutathione S-transferase U7 OS=Arabidopsis thaliana GN=GSTU7 PE=2 SV=1	AT2G29420.1	| Symbols: ATGSTU7, GST25, GSTU7 | glutathione S-transferase tau 7 | chr2:12618111-12618871 REVERSE LENGTH=227	LOC_Os05g34150.1	protein|glutathione S-transferase, putative, expressed	IMGA|Medtr5g040430.1	Glutathione S-transferase chr5 17366508-17368010 F EGN_Mt100125 20111014	GO:0009407|toxin catabolic process GO:0009751|response to salicylic acid stimulus GO:0010583|response to cyclopentenone	GO:0004364|glutathione transferase activity	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_07591	A	A2S	Potri.002G254100	Potri.002G254100(AS) Potri.002G254000(AA)	POPTR_0002s25540	sp|Q0J3L4|GRS10_ORYSJ	Monothiol glutaredoxin-S10 OS=Oryza sativa subsp. japonica GN=GRXS10 PE=2 SV=2	AT4G28730.1	| Symbols: | Glutaredoxin family protein | chr4:14199174-14200712 FORWARD LENGTH=174	LOC_Os08g45140.1	protein|OsGrx_S12 - glutaredoxin subgroup I, expressed	IMGA|Medtr5g021090.1	Glutaredoxin C3 chr5 7831449-7834001 F EGN_Mt100125 20111014	GO:0016226|iron-sulfur cluster assembly GO:0045454|cell redox homeostasis	GO:0004362|glutathione-disulfide reductase activity GO:0009055|electron carrier activity GO:0015035|protein disulfide oxidoreductase activity	GO:0009507|chloroplast
pt2_07592	C	C1S	Potri.002G254100	Potri.002G254100(CS)	sp|Q0J3L4|GRS10_ORYSJ	Monothiol glutaredoxin-S10 OS=Oryza sativa subsp. japonica GN=GRXS10 PE=2 SV=2	AT4G28730.1	| Symbols: | Glutaredoxin family protein | chr4:14199174-14200712 FORWARD LENGTH=174	LOC_Os08g45140.1	protein|OsGrx_S12 - glutaredoxin subgroup I, expressed	IMGA|Medtr5g021090.1	Glutaredoxin C3 chr5 7831449-7834001 F EGN_Mt100125 20111014	GO:0016226|iron-sulfur cluster assembly GO:0045454|cell redox homeostasis	GO:0004362|glutathione-disulfide reductase activity GO:0009055|electron carrier activity GO:0015035|protein disulfide oxidoreductase activity	GO:0009507|chloroplast
pt2_07593	A	A1S	Potri.002G254100	Potri.002G254100(AS)	POPTR_0002s25540	sp|Q0J3L4|GRS10_ORYSJ	Monothiol glutaredoxin-S10 OS=Oryza sativa subsp. japonica GN=GRXS10 PE=2 SV=2	AT4G28730.1	| Symbols: | Glutaredoxin family protein | chr4:14199174-14200712 FORWARD LENGTH=174	LOC_Os08g45140.1	protein|OsGrx_S12 - glutaredoxin subgroup I, expressed	IMGA|Medtr5g021090.1	Glutaredoxin C3 chr5 7831449-7834001 F EGN_Mt100125 20111014	GO:0016226|iron-sulfur cluster assembly GO:0045454|cell redox homeostasis	GO:0004362|glutathione-disulfide reductase activity GO:0009055|electron carrier activity GO:0015035|protein disulfide oxidoreductase activity	GO:0009507|chloroplast
pt2_07594	A	A1S	Potri.002G254200	Potri.002G254200(AS)	POPTR_0002s25550	sp|Q9SVU0|YUC8_ARATH	Flavin-containing monooxygenase YUCCA8 OS=Arabidopsis thaliana GN=YUC8 PE=2 SV=1	AT4G28720.1	| Symbols: YUC8 | Flavin-binding monooxygenase family protein | chr4:14192688-14193968 FORWARD LENGTH=426	LOC_Os04g03980.1	protein|flavin monooxygenase, putative, expressed	IMGA|Medtr1g011630.1	Dimethylaniline monooxygenase chr1 2462010-2459683 H EGN_Mt100125 20111014	GO:0009742|brassinosteroid mediated signaling pathway GO:0009851|auxin biosynthetic process GO:0055114|oxidation-reduction process	GO:0004497|monooxygenase activity GO:0004499|N,N-dimethylaniline monooxygenase activity GO:0016491|oxidoreductase activity GO:0050660|flavin adenine dinucleotide binding GO:0050661|NADP binding	NA
pt2_07595	A	A1S	Potri.002G254300	Potri.002G254300(AS)	POPTR_0002s25560	sp|Q02440|MYO5A_CHICK	Unconventional myosin-Va OS=Gallus gallus GN=MYO5A PE=1 SV=1	AT1G04160.1	| Symbols: XIB, ATXIB, XI-8, XI-B | myosin XI B | chr1:1086495-1096146 FORWARD LENGTH=1500	LOC_Os06g29350.1	protein|myosin, putative, expressed	IMGA|contig_50747_1.1	Myosin XI contig_50747 226-12071 H PREDN 20111014	GO:0000902|cell morphogenesis GO:0010090|trichome morphogenesis GO:0016049|cell growth GO:0048193|Golgi vesicle transport GO:0048467|gynoecium development GO:0048767|root hair elongation GO:0051645|Golgi localization GO:0051646|mitochondrion localization GO:0060151|peroxisome localization GO:0090436|leaf pavement cell development	GO:0003774|motor activity GO:0005515|protein binding GO:0005524|ATP binding GO:0017137|Rab GTPase binding GO:0030742|GTP-dependent protein binding	GO:0005634|nucleus GO:0005777|peroxisome GO:0016459|myosin complex
pt2_07596	A	A1S	Potri.002G254400	Potri.002G254400(AS)	POPTR_0002s25570	sp|Q6DN14|MCTP1_HUMAN	Multiple C2 and transmembrane domain-containing protein 1 OS=Homo sapiens GN=MCTP1 PE=2 SV=2	AT1G04150.1	| Symbols: | C2 calcium/lipid-binding plant phosphoribosyltransferase family protein | chr1:1081208-1084246 REVERSE LENGTH=1012	LOC_Os02g57090.1	protein|anthranilate phosphoribosyltransferase, putative, expressed	IMGA|Medtr5g010390.1	Glutathione peroxidase chr5 2530505-2527317 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_07597	A	A1S	Potri.002G254500	Potri.002G254500(AS)	POPTR_0002s25580	NA	NA	AT4G28706.1	| Symbols: | pfkB-like carbohydrate kinase family protein | chr4:14167805-14170619 FORWARD LENGTH=401	LOC_Os08g45180.1	protein|kinase, pfkB family, putative, expressed	NA	NA	GO:0006014|D-ribose metabolic process	GO:0004747|ribokinase activity GO:0016301|kinase activity GO:0016773|phosphotransferase activity, alcohol group as acceptor	GO:0009507|chloroplast
pt2_07598	A	A1S	Potri.002G254600	Potri.002G254600(AS)	POPTR_0002s25590	sp|Q8RWW0|ALE2_ARATH	Receptor-like serine/threonine-protein kinase ALE2 OS=Arabidopsis thaliana GN=ALE2 PE=1 SV=1	AT2G20300.1	| Symbols: ALE2 | Protein kinase superfamily protein | chr2:8756475-8759845 REVERSE LENGTH=744	LOC_Os02g57080.2	protein|serine/threonine-protein kinase, putative, expressed	IMGA|Medtr1g086870.1	Protein kinase 2B chr1 23242777-23246932 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0009664|plant-type cell wall organization GO:0009965|leaf morphogenesis GO:0010068|protoderm histogenesis GO:0042335|cuticle development GO:0042545|cell wall modification GO:0046777|protein autophosphorylation GO:0048367|shoot development GO:0048645|organ formation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_07599	A	A1S	Potri.002G254700	Potri.002G254700(AS)	POPTR_0002s25600	sp|Q9C0C7|AMRA1_HUMAN	Activating molecule in BECN1-regulated autophagy protein 1 OS=Homo sapiens GN=AMBRA1 PE=1 SV=2	AT1G04140.1	| Symbols: | Transducin family protein / WD-40 repeat family protein | chr1:1075984-1080321 REVERSE LENGTH=790	LOC_Os09g12550.1	protein|WD domain, G-beta repeat domain containing protein, expressed	NA	NA	GO:0006486|protein glycosylation GO:0006487|protein N-linked glycosylation GO:0008150|biological_process	GO:0000166|nucleotide binding	NA
pt2_07600	A	A2S	Potri.002G254700	Potri.002G254700(AS) Potri.014G193900(DS)	POPTR_0002s25600	sp|Q9C0C7|AMRA1_HUMAN	Activating molecule in BECN1-regulated autophagy protein 1 OS=Homo sapiens GN=AMBRA1 PE=1 SV=2	AT1G04140.1	| Symbols: | Transducin family protein / WD-40 repeat family protein | chr1:1075984-1080321 REVERSE LENGTH=790	LOC_Os09g12550.1	protein|WD domain, G-beta repeat domain containing protein, expressed	NA	NA	GO:0006486|protein glycosylation GO:0006487|protein N-linked glycosylation GO:0008150|biological_process	GO:0000166|nucleotide binding	NA
pt2_07601	A	A1S	Potri.002G254700	Potri.002G254700(AS)	POPTR_0002s25600	sp|Q9C0C7|AMRA1_HUMAN	Activating molecule in BECN1-regulated autophagy protein 1 OS=Homo sapiens GN=AMBRA1 PE=1 SV=2	AT1G04140.1	| Symbols: | Transducin family protein / WD-40 repeat family protein | chr1:1075984-1080321 REVERSE LENGTH=790	LOC_Os09g12550.1	protein|WD domain, G-beta repeat domain containing protein, expressed	NA	NA	GO:0006486|protein glycosylation GO:0006487|protein N-linked glycosylation GO:0008150|biological_process	GO:0000166|nucleotide binding	NA
pt2_07602	A	A1S	Potri.002G254800	Potri.002G254800(AS)	POPTR_0002s25610	NA	NA	AT3G04300.1	| Symbols: | RmlC-like cupins superfamily protein | chr3:1140318-1140723 FORWARD LENGTH=96	LOC_Os02g40700.1	protein|enzyme of the cupin superfamily protein, putative, expressed	IMGA|Medtr5g005820.1	hypothetical protein chr5 400061-401628 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_07603	A	A1S	Potri.002G254900	Potri.002G254900(AS)	POPTR_0002s25620	sp|A2XAZ3|ADHX_ORYSI	Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. indica GN=ADHIII PE=3 SV=1	AT5G43940.2	| Symbols: HOT5 | GroES-like zinc-binding dehydrogenase family protein | chr5:17684265-17686379 FORWARD LENGTH=391	LOC_Os02g57040.1	protein|dehydrogenase, putative, expressed	IMGA|Medtr5g087710.1	Alcohol dehydrogenase-like protein chr5 37019082-37015790 E EGN_Mt100125 20111014	GO:0006069|ethanol oxidation GO:0006569|tryptophan catabolic process GO:0008219|cell death GO:0009611|response to wounding GO:0009684|indoleacetic acid biosynthetic process GO:0010286|heat acclimation GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0046292|formaldehyde metabolic process GO:0048316|seed development GO:0051049|regulation of transport GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0008270|zinc ion binding GO:0016491|oxidoreductase activity GO:0051903|S-(hydroxymethyl)glutathione dehydrogenase activity GO:0080007|S-nitrosoglutathione reductase activity	GO:0005737|cytoplasm GO:0005777|peroxisome GO:0005829|cytosol
pt2_07604	A	A2S	Potri.002G255000	Potri.002G255000(AS) Potri.014G193700(DS)	POPTR_0002s25630	sp|O04161|AMT12_SOLLC	Ammonium transporter 1 member 2 OS=Solanum lycopersicum GN=AMT1-2 PE=2 SV=1	AT4G13510.1	| Symbols: AMT1;1, ATAMT1, ATAMT1;1 | ammonium transporter 1;1 | chr4:7858220-7859725 FORWARD LENGTH=501	LOC_Os02g40730.1	protein|ammonium transporter protein, putative, expressed	IMGA|Medtr1g079760.1	Ammonium transporter chr1 19960149-19946940 E EGN_Mt100125 20111014	GO:0001666|response to hypoxia GO:0006612|protein targeting to membrane GO:0006810|transport GO:0006820|anion transport GO:0006862|nucleotide transport GO:0006888|ER to Golgi vesicle-mediated transport GO:0006944|cellular membrane fusion GO:0009737|response to abscisic acid stimulus GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010311|lateral root formation GO:0010363|regulation of plant-type hypersensitive response GO:0015695|organic cation transport GO:0015696|ammonium transport GO:0015802|basic amino acid transport GO:0031347|regulation of defense response GO:0043069|negative regulation of programmed cell death GO:0043090|amino acid import GO:0043269|regulation of ion transport GO:0051258|protein polymerization GO:0080167|response to karrikin GO:0080181|lateral root branching	GO:0008519|ammonium transmembrane transporter activity	GO:0005634|nucleus GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane
pt2_07605	A	A1S	Potri.002G255100	Potri.002G255100(AS)	POPTR_0002s25640	sp|O04161|AMT12_SOLLC	Ammonium transporter 1 member 2 OS=Solanum lycopersicum GN=AMT1-2 PE=2 SV=1	AT4G28700.1	| Symbols: AMT1;4 | ammonium transporter 1;4 | chr4:14161681-14163195 FORWARD LENGTH=504	LOC_Os04g43070.1	protein|ammonium transporter protein, putative, expressed	IMGA|Medtr1g079760.1	Ammonium transporter chr1 19960149-19946940 E EGN_Mt100125 20111014	GO:0001666|response to hypoxia GO:0006612|protein targeting to membrane GO:0006810|transport GO:0006820|anion transport GO:0006862|nucleotide transport GO:0006888|ER to Golgi vesicle-mediated transport GO:0006944|cellular membrane fusion GO:0009737|response to abscisic acid stimulus GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010311|lateral root formation GO:0010363|regulation of plant-type hypersensitive response GO:0015695|organic cation transport GO:0015696|ammonium transport GO:0015802|basic amino acid transport GO:0031347|regulation of defense response GO:0043069|negative regulation of programmed cell death GO:0043090|amino acid import GO:0043269|regulation of ion transport GO:0051258|protein polymerization GO:0080167|response to karrikin GO:0080181|lateral root branching	GO:0008519|ammonium transmembrane transporter activity	GO:0005634|nucleus GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane
pt2_07606	A	A1S	Potri.002G255300	Potri.002G255300(AS)	POPTR_0002s25650	sp|Q54M20|TTC4_DICDI	Tetratricopeptide repeat protein 4 homolog OS=Dictyostelium discoideum GN=ttc4 PE=3 SV=1	AT1G04130.1	| Symbols: TPR2, AtTPR2 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:1073465-1075374 FORWARD LENGTH=360	LOC_Os03g53910.1	protein|tetratricopeptide repeat domain containing protein, expressed	NA	NA	NA	GO:0051879|Hsp90 protein binding	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_07607	A	A1S	Potri.002G255400	Potri.002G255400(AS)	POPTR_0002s25660	NA	NA	AT4G28690.1	| Symbols: | BEST Arabidopsis thaliana protein match is: RPM1 interacting protein 13 (TAIR:AT2G20310.1); Has 455 Blast hits to 438 proteins in 127 species: Archae - 0; Bacteria - 18; Metazoa - 148; Fungi - 91; Plants - 136; Viruses - 3; Other Eukaryotes - 59 (source: NCBI BLink). | chr4:14159093-14160876 FORWARD LENGTH=448	LOC_Os10g32850.1	protein|expressed protein	NA	NA	GO:0009626|plant-type hypersensitive response GO:0042742|defense response to bacterium	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07608	A	A1S	Potri.002G255500	Potri.002G255500(AS)	POPTR_0002s25670	NA	NA	AT2G20320.1	| Symbols: | DENN (AEX-3) domain-containing protein | chr2:8767082-8772271 FORWARD LENGTH=1029	LOC_Os03g05200.1	protein|DENN domain containing protein, expressed	NA	NA	GO:0006865|amino acid transport GO:0008150|biological_process GO:0009691|cytokinin biosynthetic process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_07609	C	C1A	Potri.002G255500	Potri.002G255500(CA)	NA	NA	AT2G20320.1	| Symbols: | DENN (AEX-3) domain-containing protein | chr2:8767082-8772271 FORWARD LENGTH=1029	LOC_Os03g05200.1	protein|DENN domain containing protein, expressed	NA	NA	GO:0006865|amino acid transport GO:0008150|biological_process GO:0009691|cytokinin biosynthetic process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_07610	A	A1S	Potri.002G255600	Potri.002G255600(AS)	POPTR_0002s25690	sp|Q8RY79|TYDC1_ARATH	Tyrosine decarboxylase 1 OS=Arabidopsis thaliana GN=ELI5 PE=2 SV=1	AT2G20340.1	| Symbols: | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein | chr2:8779804-8782490 FORWARD LENGTH=490	LOC_Os07g25590.1	protein|decarboxylase, putative, expressed	NA	NA	GO:0006520|cellular amino acid metabolic process GO:0009611|response to wounding GO:0019752|carboxylic acid metabolic process	GO:0003824|catalytic activity GO:0004837|tyrosine decarboxylase activity GO:0016831|carboxy-lyase activity GO:0030170|pyridoxal phosphate binding	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_07611	A	A1S	Potri.002G255700	Potri.002G255700(AS)	POPTR_0002s25700	NA	NA	AT5G55690.1	| Symbols: | MADS-box transcription factor family protein | chr5:22548790-22549623 REVERSE LENGTH=277	LOC_Os01g18420.1	protein|OsMADS88 - MADS-box family gene with M-gamma type-box, expressed	IMGA|Medtr1g115090.1	MADS-box transcription factor chr1 33315348-33313950 I EGN_Mt100125 20111014	NA	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_07612	A	A1S	Potri.002G255800	Potri.002G255800(AS)	POPTR_0002s25710	sp|Q7GB25|AB5C_ARATH	ABC transporter C family member 5 OS=Arabidopsis thaliana GN=ABCC5 PE=2 SV=2	AT1G04120.1	| Symbols: ATMRP5, MRP5, ATABCC5, ABCC5 | multidrug resistance-associated protein 5 | chr1:1064848-1070396 REVERSE LENGTH=1514	LOC_Os03g04920.1	protein|multidrug resistance-associated protein, putative, expressed	IMGA|Medtr5g094830.1	Multidrug resistance protein ABC transporter family chr5 40415181-40408863 E EGN_Mt100125 20111014	GO:0000226|microtubule cytoskeleton organization GO:0006810|transport GO:0006888|ER to Golgi vesicle-mediated transport GO:0009651|response to salt stress GO:0030007|cellular potassium ion homeostasis GO:0043090|amino acid import GO:0055085|transmembrane transport	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0008281|sulfonylurea receptor activity GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0000325|plant-type vacuole GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005886|plasma membrane
pt2_07613	A	A1S	Potri.002G255900	Potri.002G255900(AS)	POPTR_0002s25720	sp|Q9SK66|NDUA9_ARATH	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Arabidopsis thaliana GN=At2g20360 PE=2 SV=2	AT2G20360.1	| Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr2:8786070-8789098 FORWARD LENGTH=402	LOC_Os02g57180.1	protein|NADH dehydrogenase 1 alpha subcomplex subunit 9,mitochondrial precursor, putative, expressed	IMGA|contig_74301_1.1	NADH dehydrogenase (Ubiquinone) contig_74301 3210-653 E PREDN 20111014	GO:0006511|ubiquitin-dependent protein catabolic process GO:0009651|response to salt stress GO:0009853|photorespiration GO:0044237|cellular metabolic process GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0050662|coenzyme binding	GO:0005739|mitochondrion GO:0005747|mitochondrial respiratory chain complex I GO:0016020|membrane
pt2_07614	A	A1S	Potri.002G256000	Potri.002G256000(AS)	POPTR_0002s25730	sp|Q9SK66|NDUA9_ARATH	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Arabidopsis thaliana GN=At2g20360 PE=2 SV=2	AT1G08390.1	| Symbols: | unknown protein; Has 62 Blast hits to 62 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 34; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:2642220-2643103 FORWARD LENGTH=137	LOC_Os02g57180.2	protein|NADH dehydrogenase 1 alpha subcomplex subunit 9,mitochondrial precursor, putative, expressed	NA	NA	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07615	G	G1	NA	NA	POPTR_0002s25770	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07616	B	B1S	Potri.002G256100	Potri.002G256100(BS)	POPTR_0002s25780	NA	NA	AT2G20362.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G63310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr2:8789772-8790155 FORWARD LENGTH=127	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07617	A	A1S	Potri.002G256200	Potri.002G256200(AS)	POPTR_0002s25790	sp|Q7XJ98|KATAM_ARATH	Xyloglucan galactosyltransferase KATAMARI1 OS=Arabidopsis thaliana GN=KAM1 PE=1 SV=1	AT2G20370.1	| Symbols: KAM1, MUR3 | Exostosin family protein | chr2:8792355-8794214 FORWARD LENGTH=619	LOC_Os03g05110.1	protein|xyloglucan galactosyltransferase KATAMARI1, putative, expressed	IMGA|Medtr5g055350.1	Xyloglucan galactosyltransferase KATAMARI1 chr5 22252119-22253462 H EGN_Mt100125 20111014	GO:0009826|unidimensional cell growth GO:0009863|salicylic acid mediated signaling pathway GO:0009969|xyloglucan biosynthetic process GO:0010256|endomembrane system organization GO:0042353|fucose biosynthetic process	GO:0003824|catalytic activity GO:0016757|transferase activity, transferring glycosyl groups	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0016020|membrane GO:0030173|integral to Golgi membrane
pt2_07618	A	A1S	Potri.002G256300	Potri.002G256300(AS)	POPTR_0002s25800	sp|O64495|SDD1_ARATH	Subtilisin-like protease SDD1 OS=Arabidopsis thaliana GN=SDD1 PE=2 SV=1	AT1G04110.1	| Symbols: SDD1 | Subtilase family protein | chr1:1061457-1063784 REVERSE LENGTH=775	LOC_Os03g04950.1	protein|OsSub26 - Putative Subtilisin homologue, expressed	IMGA|Medtr5g016120.1	Subtilisin-like protease chr5 5470271-5467977 H EGN_Mt100125 20111014	GO:0006508|proteolysis GO:0008152|metabolic process GO:0010103|stomatal complex morphogenesis GO:0042127|regulation of cell proliferation GO:0043086|negative regulation of catalytic activity	GO:0004252|serine-type endopeptidase activity GO:0042802|identical protein binding	GO:0005576|extracellular region GO:0005618|cell wall GO:0009897|external side of plasma membrane
pt2_07619	A	A1S	Potri.002G256400	Potri.002G256400(AS)	POPTR_0002s25810	sp|Q0JG75|PSB28_ORYSJ	Photosystem II reaction center PSB28 protein, chloroplastic OS=Oryza sativa subsp. japonica GN=PSB28 PE=2 SV=2	AT4G28660.1	| Symbols: PSB28 | photosystem II reaction center PSB28 protein | chr4:14150008-14150933 FORWARD LENGTH=183	LOC_Os01g71190.1	protein|photosystem II reaction center PSB28 protein, chloroplast precursor, putative, expressed	NA	NA	GO:0000038|very long-chain fatty acid metabolic process GO:0006655|phosphatidylglycerol biosynthetic process GO:0010207|photosystem II assembly GO:0015979|photosynthesis GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0042335|cuticle development	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009523|photosystem II GO:0009535|chloroplast thylakoid membrane GO:0009539|photosystem II reaction center GO:0009570|chloroplast stroma GO:0009579|thylakoid GO:0009654|oxygen evolving complex GO:0016020|membrane
pt2_07620	A	A1S	Potri.002G256500	Potri.002G256500(AS)	POPTR_0002s25820	sp|Q9M0G7|PXL2_ARATH	Leucine-rich repeat receptor-like protein kinase PXL2 OS=Arabidopsis thaliana GN=PXL2 PE=2 SV=1	AT4G28650.1	| Symbols: | Leucine-rich repeat transmembrane protein kinase family protein | chr4:14144155-14147276 REVERSE LENGTH=1013	LOC_Os03g05140.1	protein|receptor-like protein kinase 2 precursor, putative, expressed	IMGA|contig_53710_1.1	Receptor-like protein kinase contig_53710 698-4054 H PREDN 20111014	GO:0002237|response to molecule of bacterial origin GO:0006468|protein phosphorylation GO:0007165|signal transduction GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway GO:0010067|procambium histogenesis GO:0010103|stomatal complex morphogenesis GO:0048443|stamen development	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_07621	A	A1S	Potri.002G256600	Potri.002G256600(AS)	POPTR_0002s25830	sp|Q38829|IAA11_ARATH	Auxin-responsive protein IAA11 OS=Arabidopsis thaliana GN=IAA11 PE=1 SV=1	AT4G28640.3	| Symbols: IAA11 | indole-3-acetic acid inducible 11 | chr4:14142288-14143677 FORWARD LENGTH=250	LOC_Os02g57250.2	protein|OsIAA10 - Auxin-responsive Aux/IAA gene family member, expressed	IMGA|Medtr5g030710.1	Auxin-responsive protein (Aux/IAA) chr5 12699892-12694370 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009733|response to auxin stimulus GO:0010583|response to cyclopentenone	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0046983|protein dimerization activity	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_07622	A	A1S	Potri.002G256700	Potri.002G256700(AS)	POPTR_0002s25850	NA	NA	AT2G20390.1	| Symbols: | unknown protein; Has 50 Blast hits to 50 proteins in 18 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:8796475-8798142 REVERSE LENGTH=183	LOC_Os02g51840.3	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_07623	A	A1S	Potri.002G256800	Potri.002G256800(AS)	POPTR_0002s25860	NA	NA	AT5G43950.1	| Symbols: | Plant protein of unknown function (DUF946) | chr5:17686707-17688623 REVERSE LENGTH=566	LOC_Os03g04930.1	protein|expressed protein	IMGA|Medtr5g007860.1	hypothetical protein chr5 1320778-1317881 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_07624	A	A1S	Potri.002G256900	Potri.002G256900(AS)	POPTR_0002s25870	NA	NA	AT4G17940.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:9965787-9966778 FORWARD LENGTH=274	LOC_Os03g04710.1	protein|expressed protein	IMGA|Medtr1g073230.1	TPR domain protein chr1 18614374-18617678 F EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0009507|chloroplast
pt2_07625	A	A1S	Potri.002G257000	Potri.002G257000(AS)	POPTR_0002s25880	sp|O94260|G3BP_SCHPO	Putative G3BP-like protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=nxt3 PE=1 SV=1	AT5G43960.1	| Symbols: | Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain | chr5:17689154-17691653 REVERSE LENGTH=450	LOC_Os02g03890.1	protein|nuclear transport factor 2, putative, expressed	IMGA|Medtr1g045800.1	Ras GTPase-activating protein-binding protein chr1 13719361-13714832 F EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0006810|transport GO:0006913|nucleocytoplasmic transport GO:0009220|pyrimidine ribonucleotide biosynthetic process	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005622|intracellular
pt2_07626	C	C1S	Potri.002G257000	Potri.002G257000(CS)	sp|O94260|G3BP_SCHPO	Putative G3BP-like protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=nxt3 PE=1 SV=1	AT5G43960.1	| Symbols: | Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain | chr5:17689154-17691653 REVERSE LENGTH=450	LOC_Os02g03890.1	protein|nuclear transport factor 2, putative, expressed	IMGA|Medtr1g045800.1	Ras GTPase-activating protein-binding protein chr1 13719361-13714832 F EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0006810|transport GO:0006913|nucleocytoplasmic transport GO:0009220|pyrimidine ribonucleotide biosynthetic process	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005622|intracellular
pt2_07627	A	A1S	Potri.002G257100	Potri.002G257100(AS)	POPTR_0002s25890	sp|Q86UA1|PRP39_HUMAN	Pre-mRNA-processing factor 39 OS=Homo sapiens GN=PRPF39 PE=1 SV=3	AT1G04080.1	| Symbols: PRP39 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:1051803-1056550 FORWARD LENGTH=768	LOC_Os03g11200.1	protein|pre-mRNA-processing factor 39, putative, expressed	NA	NA	GO:0006396|RNA processing GO:0006397|mRNA processing GO:0048510|regulation of timing of transition from vegetative to reproductive phase	NA	GO:0005622|intracellular GO:0005634|nucleus GO:0005829|cytosol
pt2_07628	A	A2S	Potri.002G257200	Potri.002G257200(AS) Potri.014G192600(DS)	POPTR_0002s25900	sp|Q9FNC9|TO222_ARATH	Mitochondrial import receptor subunit TOM22 homolog 2 OS=Arabidopsis thaliana GN=TOM22-2 PE=1 SV=3	AT5G43970.1	| Symbols: TOM22-V, TOM9-2, ATTOM22-V | translocase of outer membrane 22-V | chr5:17692888-17693187 FORWARD LENGTH=99	LOC_Os02g29400.1	protein|expressed protein	NA	NA	GO:0006626|protein targeting to mitochondrion	GO:0015450|P-P-bond-hydrolysis-driven protein transmembrane transporter activity	GO:0005739|mitochondrion GO:0005742|mitochondrial outer membrane translocase complex GO:0005774|vacuolar membrane GO:0009536|plastid
pt2_07629	A	A1S	Potri.002G257300	Potri.002G257300(AS)	POPTR_0002s25910	sp|Q6NM73|CRR3_ARATH	Cysteine-rich repeat secretory protein 3 OS=Arabidopsis thaliana GN=CRRSP3 PE=2 SV=1	AT1G04520.1	| Symbols: PDLP2 | plasmodesmata-located protein 2 | chr1:1231852-1233787 FORWARD LENGTH=307	LOC_Os04g45460.1	protein|cysteine-rich repeat secretory protein precursor, putative, expressed	IMGA|Medtr1g080350.1	Cysteine-rich repeat secretory protein chr1 20227400-20226424 H EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0010497|plasmodesmata-mediated intercellular transport GO:0046739|spread of virus in multicellular host	GO:0003674|molecular_function	GO:0005576|extracellular region GO:0009506|plasmodesma
pt2_07630	A	A1S	Potri.002G257400	Potri.002G257400(AS)	POPTR_0002s25920	sp|Q9FNC7|SUVR2_ARATH	Histone-lysine N-methyltransferase SUVR2 OS=Arabidopsis thaliana GN=SUVR2 PE=2 SV=2	AT5G43990.4	| Symbols: SUVR2, SDG18 | SET-domain containing protein lysine methyltransferase family protein | chr5:17698523-17701733 FORWARD LENGTH=717	LOC_Os02g40770.1	protein|SET domain containing protein, expressed	IMGA|Medtr1g080340.1	Histone-lysine N-methyltransferase SUVR4 chr1 20221512-20216447 H EGN_Mt100125 20111014	GO:0006260|DNA replication GO:0006270|DNA replication initiation GO:0006275|regulation of DNA replication GO:0006306|DNA methylation GO:0006346|methylation-dependent chromatin silencing GO:0008283|cell proliferation GO:0009909|regulation of flower development GO:0016246|RNA interference GO:0016570|histone modification GO:0031047|gene silencing by RNA GO:0031048|chromatin silencing by small RNA GO:0034968|histone lysine methylation GO:0048449|floral organ formation GO:0048451|petal formation GO:0048453|sepal formation GO:0051567|histone H3-K9 methylation GO:0051726|regulation of cell cycle	GO:0008270|zinc ion binding GO:0018024|histone-lysine N-methyltransferase activity	GO:0005634|nucleus GO:0005730|nucleolus GO:0009507|chloroplast
pt2_07631	C	C1S	Potri.002G257400	Potri.002G257400(CS)	sp|Q9FNC7|SUVR2_ARATH	Histone-lysine N-methyltransferase SUVR2 OS=Arabidopsis thaliana GN=SUVR2 PE=2 SV=2	AT5G43990.4	| Symbols: SUVR2, SDG18 | SET-domain containing protein lysine methyltransferase family protein | chr5:17698523-17701733 FORWARD LENGTH=717	LOC_Os02g40770.1	protein|SET domain containing protein, expressed	IMGA|Medtr1g080340.1	Histone-lysine N-methyltransferase SUVR4 chr1 20221512-20216447 H EGN_Mt100125 20111014	GO:0006260|DNA replication GO:0006270|DNA replication initiation GO:0006275|regulation of DNA replication GO:0006306|DNA methylation GO:0006346|methylation-dependent chromatin silencing GO:0008283|cell proliferation GO:0009909|regulation of flower development GO:0016246|RNA interference GO:0016570|histone modification GO:0031047|gene silencing by RNA GO:0031048|chromatin silencing by small RNA GO:0034968|histone lysine methylation GO:0048449|floral organ formation GO:0048451|petal formation GO:0048453|sepal formation GO:0051567|histone H3-K9 methylation GO:0051726|regulation of cell cycle	GO:0008270|zinc ion binding GO:0018024|histone-lysine N-methyltransferase activity	GO:0005634|nucleus GO:0005730|nucleolus GO:0009507|chloroplast
pt2_07632	B	B1S	Potri.002G257500	Potri.002G257500(BS)	POPTR_0002s25930	sp|P49690|RL23_ARATH	60S ribosomal protein L23 OS=Arabidopsis thaliana GN=RPL23A PE=2 SV=3	AT3G04400.1	| Symbols: emb2171 | Ribosomal protein L14p/L23e family protein | chr3:1167339-1168308 FORWARD LENGTH=140	LOC_Os10g32920.1	protein|ribosomal protein, putative, expressed	IMGA|Medtr5g054560.1	60S ribosomal protein L23 chr5 21935664-21934039 E EGN_Mt100125 20111014	GO:0001510|RNA methylation GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005730|nucleolus GO:0005840|ribosome GO:0009507|chloroplast GO:0022625|cytosolic large ribosomal subunit
pt2_07633	A	A1S	Potri.002G257600	Potri.002G257600(AS)	POPTR_0002s25940	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07634	A	A1S	Potri.002G257700	Potri.002G257700(AS)	POPTR_0002s25950	sp|P27061|PPA1_SOLLC	Acid phosphatase 1 OS=Solanum lycopersicum GN=APS1 PE=2 SV=1	AT1G04040.1	| Symbols: | HAD superfamily, subfamily IIIB acid phosphatase | chr1:1042564-1043819 REVERSE LENGTH=271	LOC_Os06g04790.1	protein|HAD superfamily phosphatase, putative, expressed	IMGA|Medtr5g081740.1	hypothetical protein chr5 34018290-34015641 F EGN_Mt100125 20111014	GO:0000271|polysaccharide biosynthetic process GO:0009825|multidimensional cell growth GO:0009932|cell tip growth GO:0010817|regulation of hormone levels GO:0016049|cell growth GO:0030243|cellulose metabolic process GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0048767|root hair elongation GO:0071555|cell wall organization	GO:0003993|acid phosphatase activity	GO:0005618|cell wall GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0009505|plant-type cell wall GO:0009506|plasmodesma
pt2_07635	A	A1S	Potri.002G257800	Potri.002G257800(AS)	POPTR_0002s25960	sp|Q8GUN5|PHL1_ARATH	Protein PHR1-LIKE 1 OS=Arabidopsis thaliana GN=PHL1 PE=1 SV=1	AT4G28610.1	| Symbols: PHR1, AtPHR1 | phosphate starvation response 1 | chr4:14133164-14134951 REVERSE LENGTH=409	LOC_Os07g25710.1	protein|myb-like DNA-binding domain containing protein, expressed	IMGA|Medtr1g080330.1	Two-component response regulator ARR2 chr1 20210666-20206390 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0007623|circadian rhythm GO:0016036|cellular response to phosphate starvation GO:0055063|sulfate ion homeostasis GO:0071486|cellular response to high light intensity	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_07636	A	A1S	Potri.002G257900	Potri.002G257900(AS)	POPTR_0002s25970	sp|Q84JA6|CESA4_ARATH	Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Arabidopsis thaliana GN=CESA4 PE=1 SV=1	AT5G44030.1	| Symbols: CESA4, IRX5, NWS2 | cellulose synthase A4 | chr5:17714713-17719564 FORWARD LENGTH=1049	LOC_Os03g62090.1	protein|CESA5 - cellulose synthase, expressed	IMGA|Medtr5g029190.1	Cellulose synthase-like protein chr5 11949044-11944517 E EGN_Mt100125 20111014	GO:0010413|glucuronoxylan metabolic process GO:0030244|cellulose biosynthetic process GO:0042742|defense response to bacterium GO:0044036|cell wall macromolecule metabolic process GO:0045492|xylan biosynthetic process GO:0050832|defense response to fungus	GO:0016757|transferase activity, transferring glycosyl groups GO:0016759|cellulose synthase activity GO:0016760|cellulose synthase (UDP-forming) activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_07637	B	B4S	Potri.002G258000	Potri.002G258000(BS) Potri.002G258400(BS) Potri.002G258200(BS) Potri.002G258100(BS)	POPTR_0002s25980	sp|Q8VZG8|Y4885_ARATH	Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=1 SV=3	AT4G08850.1	| Symbols: | Leucine-rich repeat receptor-like protein kinase family protein | chr4:5636693-5640496 REVERSE LENGTH=1045	LOC_Os10g33040.1	protein|receptor-like protein kinase precursor, putative, expressed	IMGA|Medtr1g039220.1	Receptor protein kinase-like protein chr1 10530698-10534277 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006857|oligopeptide transport GO:0006995|cellular response to nitrogen starvation GO:0009627|systemic acquired resistance GO:0031347|regulation of defense response	GO:0004672|protein kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane
pt2_07638	A	A4S	Potri.002G258200	Potri.002G258200(AS) Potri.002G258000(BS) Potri.002G258100(BS) Potri.002G258400(DS)	POPTR_0002s25990	sp|Q8VZG8|Y4885_ARATH	Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=1 SV=3	AT4G08850.1	| Symbols: | Leucine-rich repeat receptor-like protein kinase family protein | chr4:5636693-5640496 REVERSE LENGTH=1045	LOC_Os10g33040.1	protein|receptor-like protein kinase precursor, putative, expressed	IMGA|Medtr1g039220.1	Receptor protein kinase-like protein chr1 10530698-10534277 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006857|oligopeptide transport GO:0006995|cellular response to nitrogen starvation GO:0009627|systemic acquired resistance GO:0031347|regulation of defense response	GO:0004672|protein kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane
pt2_07639	A	A1S	Potri.002G258300	Potri.002G258300(AS)	POPTR_0002s26000	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07640	A	A3S	Potri.002G258400	Potri.002G258400(AS) Potri.002G258100(AS) Potri.002G258200(BS)	POPTR_0002s26010	sp|Q8VZG8|Y4885_ARATH	Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=1 SV=3	AT4G08850.1	| Symbols: | Leucine-rich repeat receptor-like protein kinase family protein | chr4:5636693-5640496 REVERSE LENGTH=1045	LOC_Os10g33040.1	protein|receptor-like protein kinase precursor, putative, expressed	IMGA|Medtr1g039220.1	Receptor protein kinase-like protein chr1 10530698-10534277 H EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0006468|protein phosphorylation GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway GO:0009814|defense response, incompatible interaction	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_07641	A	A2S	Potri.002G258500	Potri.002G258500(AS) Potri.014G195100(DS)	POPTR_0002s26020	sp|Q9M0G7|PXL2_ARATH	Leucine-rich repeat receptor-like protein kinase PXL2 OS=Arabidopsis thaliana GN=PXL2 PE=2 SV=1	AT1G04030.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44040.1); Has 1835 Blast hits to 1511 proteins in 238 species: Archae - 7; Bacteria - 164; Metazoa - 377; Fungi - 135; Plants - 187; Viruses - 22; Other Eukaryotes - 943 (source: NCBI BLink). | chr1:1040597-1042313 FORWARD LENGTH=434	LOC_Os10g33080.1	protein|leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed	IMGA|Medtr1g039110.1	Leucine-rich repeat receptor-like protein kinase chr1 10456672-10453160 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_07642	A	A1S	Potri.002G258500	Potri.002G258500(AS)	POPTR_0002s26020	sp|Q9M0G7|PXL2_ARATH	Leucine-rich repeat receptor-like protein kinase PXL2 OS=Arabidopsis thaliana GN=PXL2 PE=2 SV=1	AT1G04030.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44040.1); Has 1835 Blast hits to 1511 proteins in 238 species: Archae - 7; Bacteria - 164; Metazoa - 377; Fungi - 135; Plants - 187; Viruses - 22; Other Eukaryotes - 943 (source: NCBI BLink). | chr1:1040597-1042313 FORWARD LENGTH=434	LOC_Os10g33080.1	protein|leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed	IMGA|Medtr1g039110.1	Leucine-rich repeat receptor-like protein kinase chr1 10456672-10453160 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_07643	C	C1S	Potri.002G258500	Potri.002G258500(CS)	sp|Q9M0G7|PXL2_ARATH	Leucine-rich repeat receptor-like protein kinase PXL2 OS=Arabidopsis thaliana GN=PXL2 PE=2 SV=1	AT1G04030.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44040.1); Has 1835 Blast hits to 1511 proteins in 238 species: Archae - 7; Bacteria - 164; Metazoa - 377; Fungi - 135; Plants - 187; Viruses - 22; Other Eukaryotes - 943 (source: NCBI BLink). | chr1:1040597-1042313 FORWARD LENGTH=434	LOC_Os10g33080.1	protein|leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed	IMGA|Medtr1g039110.1	Leucine-rich repeat receptor-like protein kinase chr1 10456672-10453160 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_07644	A	A2S	Potri.002G258600	Potri.002G258600(AS) Potri.014G195300(BS)	POPTR_0002s26030	sp|O94432|YHKF_SCHPO	Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC660.15 PE=2 SV=1	AT4G14300.1	| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr4:8231179-8232785 FORWARD LENGTH=411	LOC_Os10g33230.1	protein|RNA recognition motif containing protein, putative, expressed	IMGA|Medtr5g097580.1	Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like protein chr5 41711192-41715991 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005575|cellular_component
pt2_07645	A	A1S	Potri.002G258700	Potri.002G258700(AS)	POPTR_0002s26040	sp|Q9FNL7|PTR3_ARATH	Peptide transporter PTR3-A OS=Arabidopsis thaliana GN=PTR3-A PE=2 SV=1	AT5G46050.1	| Symbols: ATPTR3, PTR3 | peptide transporter 3 | chr5:18675062-18679071 REVERSE LENGTH=582	LOC_Os10g33210.1	protein|peptide transporter PTR3-A, putative, expressed	IMGA|Medtr1g042310.1	Peptide transporter PTR3-A chr1 12093187-12087948 E EGN_Mt100125 20111014	GO:0006857|oligopeptide transport GO:0009611|response to wounding GO:0009737|response to abscisic acid stimulus GO:0009751|response to salicylic acid stimulus GO:0009753|response to jasmonic acid stimulus GO:0042538|hyperosmotic salinity response GO:0042742|defense response to bacterium GO:0042938|dipeptide transport GO:0042939|tripeptide transport GO:0043201|response to leucine GO:0080052|response to histidine GO:0080053|response to phenylalanine	GO:0005215|transporter activity GO:0042936|dipeptide transporter activity GO:0042937|tripeptide transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_07646	A	A2S	Potri.002G258800	Potri.002G258800(AS) Potri.002G258900(DS)	POPTR_0002s26050	sp|Q56X05|PPR15_ARATH	Pentatricopeptide repeat-containing protein At1g06145 OS=Arabidopsis thaliana GN=EMB1444 PE=2 SV=2	AT1G06150.1	| Symbols: EMB1444 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr1:1867129-1873194 REVERSE LENGTH=1322	LOC_Os07g44299.1	protein|pentatricopeptide, putative, expressed	IMGA|Medtr5g020650.1	Pentatricopeptide repeat-containing protein chr5 7655084-7653528 E EGN_Mt100125 20111014	NA	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus GO:0009507|chloroplast
pt2_07647	A	A1S	Potri.002G258900	Potri.002G258900(AS)	POPTR_0002s26060	sp|Q9FNL7|PTR3_ARATH	Peptide transporter PTR3-A OS=Arabidopsis thaliana GN=PTR3-A PE=2 SV=1	AT5G46050.1	| Symbols: ATPTR3, PTR3 | peptide transporter 3 | chr5:18675062-18679071 REVERSE LENGTH=582	LOC_Os10g33210.1	protein|peptide transporter PTR3-A, putative, expressed	IMGA|Medtr1g042310.1	Peptide transporter PTR3-A chr1 12093187-12087948 E EGN_Mt100125 20111014	GO:0006857|oligopeptide transport GO:0009611|response to wounding GO:0009737|response to abscisic acid stimulus GO:0009751|response to salicylic acid stimulus GO:0009753|response to jasmonic acid stimulus GO:0042538|hyperosmotic salinity response GO:0042742|defense response to bacterium GO:0042938|dipeptide transport GO:0042939|tripeptide transport GO:0043201|response to leucine GO:0080052|response to histidine GO:0080053|response to phenylalanine	GO:0005215|transporter activity GO:0042936|dipeptide transporter activity GO:0042937|tripeptide transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_07648	A	A1S	Potri.002G259000	Potri.002G259000(AS)	POPTR_0002s26070	sp|Q8RXD4|BRCA1_ARATH	Protein BREAST CANCER SUSCEPTIBILITY 1 homolog OS=Arabidopsis thaliana GN=BRCA1 PE=2 SV=1	AT1G04020.1	| Symbols: ATBARD1, BARD1, ROW1 | breast cancer associated RING 1 | chr1:1036610-1040045 FORWARD LENGTH=714	LOC_Os04g43300.1	protein|BRCA1 C Terminus domain containing protein, expressed	NA	NA	GO:0000724|double-strand break repair via homologous recombination GO:0006260|DNA replication GO:0006261|DNA-dependent DNA replication GO:0006275|regulation of DNA replication GO:0006281|DNA repair GO:0006306|DNA methylation GO:0008283|cell proliferation GO:0009555|pollen development GO:0009934|regulation of meristem structural organization GO:0009965|leaf morphogenesis GO:0016444|somatic cell DNA recombination GO:0016568|chromatin modification GO:0031047|gene silencing by RNA GO:0048366|leaf development GO:0051567|histone H3-K9 methylation GO:0051726|regulation of cell cycle	GO:0003677|DNA binding GO:0003713|transcription coactivator activity GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_07649	A	A1S	Potri.002G259100	Potri.002G259100(AS)	POPTR_0002s26080	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07650	A	A1S	Potri.002G259200	Potri.002G259200(AS)	POPTR_0002s26090	sp|Q9SFC6|GDIR_ARATH	Rho GDP-dissociation inhibitor 1 OS=Arabidopsis thaliana GN=GDI1 PE=1 SV=1	AT3G07880.1	| Symbols: SCN1 | Immunoglobulin E-set superfamily protein | chr3:2514175-2515544 FORWARD LENGTH=240	LOC_Os06g21340.1	protein|rho GDP-dissociation inhibitor 1, putative, expressed	NA	NA	GO:0007015|actin filament organization GO:0009932|cell tip growth GO:0010053|root epidermal cell differentiation	GO:0005094|Rho GDP-dissociation inhibitor activity GO:0005515|protein binding	GO:0005737|cytoplasm
pt2_07651	C	C1S	Potri.002G259200	Potri.002G259200(CS)	sp|Q9SFC6|GDIR_ARATH	Rho GDP-dissociation inhibitor 1 OS=Arabidopsis thaliana GN=GDI1 PE=1 SV=1	AT3G07880.1	| Symbols: SCN1 | Immunoglobulin E-set superfamily protein | chr3:2514175-2515544 FORWARD LENGTH=240	LOC_Os06g21340.1	protein|rho GDP-dissociation inhibitor 1, putative, expressed	NA	NA	GO:0007015|actin filament organization GO:0009932|cell tip growth GO:0010053|root epidermal cell differentiation	GO:0005094|Rho GDP-dissociation inhibitor activity GO:0005515|protein binding	GO:0005737|cytoplasm
pt2_07652	A	A1S	Potri.002G259200	Potri.002G259200(AS)	POPTR_0002s26090	sp|Q9SFC6|GDIR_ARATH	Rho GDP-dissociation inhibitor 1 OS=Arabidopsis thaliana GN=GDI1 PE=1 SV=1	AT3G07880.1	| Symbols: SCN1 | Immunoglobulin E-set superfamily protein | chr3:2514175-2515544 FORWARD LENGTH=240	LOC_Os06g21340.1	protein|rho GDP-dissociation inhibitor 1, putative, expressed	NA	NA	GO:0007015|actin filament organization GO:0009932|cell tip growth GO:0010053|root epidermal cell differentiation	GO:0005094|Rho GDP-dissociation inhibitor activity GO:0005515|protein binding	GO:0005737|cytoplasm
pt2_07653	A	A1S	Potri.002G259300	Potri.002G259300(AS)	POPTR_0002s26100	NA	NA	AT4G28600.1	| Symbols: NPGR2 | no pollen germination related 2 | chr4:14130046-14132599 FORWARD LENGTH=739	LOC_Os10g33290.1	protein|tetratricopeptide repeat domain containing protein, expressed	IMGA|Medtr1g075480.2	Tetratricopeptide repeat protein 7B chr1 19160372-19156477 E EGN_Mt100125 20111014	NA	GO:0005516|calmodulin binding	GO:0005886|plasma membrane
pt2_07654	A	A1S	Potri.002G259300	Potri.002G259300(AS)	POPTR_0002s26100	NA	NA	AT4G28600.1	| Symbols: NPGR2 | no pollen germination related 2 | chr4:14130046-14132599 FORWARD LENGTH=739	LOC_Os10g33290.1	protein|tetratricopeptide repeat domain containing protein, expressed	IMGA|Medtr1g075480.2	Tetratricopeptide repeat protein 7B chr1 19160372-19156477 E EGN_Mt100125 20111014	NA	GO:0005516|calmodulin binding	GO:0005886|plasma membrane
pt2_07655	A	A1S	Potri.002G259300	Potri.002G259300(AS)	POPTR_0002s26100	NA	NA	AT4G28600.1	| Symbols: NPGR2 | no pollen germination related 2 | chr4:14130046-14132599 FORWARD LENGTH=739	LOC_Os10g33290.1	protein|tetratricopeptide repeat domain containing protein, expressed	IMGA|Medtr1g075480.2	Tetratricopeptide repeat protein 7B chr1 19160372-19156477 E EGN_Mt100125 20111014	NA	GO:0005516|calmodulin binding	GO:0005886|plasma membrane
pt2_07656	A	A1S	Potri.002G259400	Potri.002G259400(AS)	POPTR_0002s26110	NA	NA	AT1G04000.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44060.1); Has 62 Blast hits to 62 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:1028415-1028873 REVERSE LENGTH=152	NA	NA	IMGA|contig_73615_1.1	Unknown protein contig_73615 871-2504 E PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_07657	A	A1S	Potri.002G259600	Potri.002G259600(AS)	POPTR_0002s26120	sp|O82662|SUCB_ARATH	Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Arabidopsis thaliana GN=At2g20420 PE=1 SV=1	AT2G20420.1	| Symbols: | ATP citrate lyase (ACL) family protein | chr2:8805574-8807858 FORWARD LENGTH=421	LOC_Os02g40830.1	protein|succinyl-CoA ligase beta-chain, mitochondrial precursor, putative, expressed	NA	NA	GO:0006094|gluconeogenesis GO:0006096|glycolysis GO:0006511|ubiquitin-dependent protein catabolic process GO:0008152|metabolic process GO:0009651|response to salt stress GO:0009853|photorespiration GO:0019243|methylglyoxal catabolic process to D-lactate GO:0046686|response to cadmium ion GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	GO:0003824|catalytic activity GO:0004776|succinate-CoA ligase (GDP-forming) activity GO:0005507|copper ion binding GO:0005524|ATP binding GO:0016874|ligase activity GO:0046872|metal ion binding	GO:0005739|mitochondrion
pt2_07658	A	A1S	Potri.002G259700	Potri.002G259700(AS)	POPTR_0002s26130	sp|B5WWZ9|FAO2_LOTJA	Long-chain-alcohol oxidase FAO2 OS=Lotus japonicus GN=FAO2 PE=2 SV=1	AT4G28570.1	| Symbols: | Long-chain fatty alcohol dehydrogenase family protein | chr4:14119548-14121923 FORWARD LENGTH=748	LOC_Os02g40840.1	protein|alcohol oxidase, putative, expressed	IMGA|Medtr5g025650.1	"GMC-type oxidoreductase, putative" chr5 10200868-10192215 E EGN_Mt100125 20111014	GO:0006888|ER to Golgi vesicle-mediated transport GO:0055114|oxidation-reduction process	GO:0009055|electron carrier activity GO:0016614|oxidoreductase activity, acting on CH-OH group of donors GO:0046577|long-chain-alcohol oxidase activity GO:0050660|flavin adenine dinucleotide binding	GO:0005634|nucleus GO:0005783|endoplasmic reticulum
pt2_07659	A	A1S	Potri.002G259800	Potri.002G259800(AS)	POPTR_0002s26140	sp|Q2TE74|PCS2_LOTJA	Glutathione gamma-glutamylcysteinyltransferase 2 OS=Lotus japonicus GN=PCS2 PE=2 SV=2	AT5G44070.1	| Symbols: CAD1, ARA8, ATPCS1, PCS1 | phytochelatin synthase 1 (PCS1) | chr5:17734876-17737672 FORWARD LENGTH=485	LOC_Os05g34290.1	protein|glutathione gamma-glutamylcysteinyltransferase 1, putative, expressed	NA	NA	GO:0000165|MAPK cascade GO:0002831|regulation of response to biotic stimulus GO:0006612|protein targeting to membrane GO:0009409|response to cold GO:0009595|detection of biotic stimulus GO:0009697|salicylic acid biosynthetic process GO:0009814|defense response, incompatible interaction GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010038|response to metal ion GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0015700|arsenite transport GO:0019684|photosynthesis, light reaction GO:0031348|negative regulation of defense response GO:0042344|indole glucosinolate catabolic process GO:0042742|defense response to bacterium GO:0043900|regulation of multi-organism process GO:0046685|response to arsenic-containing substance GO:0046686|response to cadmium ion GO:0046938|phytochelatin biosynthetic process GO:0050832|defense response to fungus GO:0052544|defense response by callose deposition in cell wall	GO:0005507|copper ion binding GO:0015446|arsenite-transmembrane transporting ATPase activity GO:0016756|glutathione gamma-glutamylcysteinyltransferase activity GO:0046870|cadmium ion binding GO:0046872|metal ion binding GO:0071992|phytochelatin transmembrane transporter activity	GO:0005829|cytosol GO:0009507|chloroplast
pt2_07660	A	A1S	Potri.002G259900	Potri.002G259900(AS)	POPTR_0002s26150	sp|Q9FRL3|ERDL6_ARATH	Sugar transporter ERD6-like 6 OS=Arabidopsis thaliana GN=At1g75220 PE=1 SV=1	AT1G75220.1	| Symbols: | Major facilitator superfamily protein | chr1:28229412-28232606 REVERSE LENGTH=487	LOC_Os05g50280.1	protein|transporter family protein, putative, expressed	IMGA|Medtr5g020270.1	Sugar transporter ERD6-like protein chr5 7498368-7494668 H EGN_Mt100125 20111014	GO:0009694|jasmonic acid metabolic process GO:0009753|response to jasmonic acid stimulus GO:0010030|positive regulation of seed germination GO:0042593|glucose homeostasis	GO:0005215|transporter activity GO:0005351|sugar:hydrogen symporter activity GO:0015144|carbohydrate transmembrane transporter activity GO:0022857|transmembrane transporter activity GO:0022891|substrate-specific transmembrane transporter activity	GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0009705|plant-type vacuole membrane GO:0016020|membrane
pt2_07661	A	A1S	Potri.002G260000	Potri.002G260000(AS)	POPTR_0002s26160	NA	NA	AT1G75250.2	| Symbols: ATRL6, RSM3, RL6 | RAD-like 6 | chr1:28244463-28245453 REVERSE LENGTH=97	LOC_Os05g50340.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr5g020170.1	MYB transcription factor MYB164 chr5 7437642-7437935 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus GO:0009507|chloroplast
pt2_07662	G	G1	NA	NA	POPTR_0002s26165	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07663	A	A1S	Potri.002G260100	Potri.002G260100(AS)	POPTR_0002s26170	sp|C0LGK4|Y2165_ARATH	Probable LRR receptor-like serine/threonine-protein kinase At2g16250 OS=Arabidopsis thaliana GN=At2g16250 PE=1 SV=1	AT2G16250.1	| Symbols: | Leucine-rich repeat protein kinase family protein | chr2:7039682-7042933 REVERSE LENGTH=915	LOC_Os03g51440.1	protein|LRR receptor-like protein kinase, putative, expressed	IMGA|Medtr5g090100.1	Receptor-like protein kinase chr5 38189654-38185879 E EGN_Mt100125 20111014	GO:0002237|response to molecule of bacterial origin GO:0006468|protein phosphorylation GO:0007165|signal transduction GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway GO:0010103|stomatal complex morphogenesis GO:0048443|stamen development	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane GO:0009505|plant-type cell wall GO:0009506|plasmodesma
pt2_07664	A	A1S	Potri.002G260200	Potri.002G260200(AS)	POPTR_0002s26180	sp|Q5ZIZ4|5NTC_CHICK	Cytosolic purine 5'-nucleotidase OS=Gallus gallus GN=NT5C2 PE=2 SV=1	AT1G75210.1	| Symbols: | HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase | chr1:28223990-28228751 FORWARD LENGTH=642	LOC_Os03g56310.4	protein|5-nucleotidase domain-containing protein, putative, expressed	IMGA|Medtr5g082530.1	Cytosolic purine 5'-nucleotidase chr5 34475033-34469705 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0008253|5'-nucleotidase activity	GO:0009507|chloroplast
pt2_07665	A	A1S	Potri.002G260300	Potri.002G260300(AS)	POPTR_0002s26190	sp|A1T3J8|Y910_MYCVP	Putative S-adenosyl-L-methionine-dependent methyltransferase Mvan_0910 OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=Mvan_0910 PE=3 SV=1	AT5G42760.1	| Symbols: | Leucine carboxyl methyltransferase | chr5:17148953-17150105 FORWARD LENGTH=348	LOC_Os03g56370.1	protein|methyltransferase, putative, expressed	NA	NA	NA	GO:0008168|methyltransferase activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07666	A	A1S	Potri.002G260400	Potri.002G260400(AS)	POPTR_0002s26200	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005886|plasma membrane
pt2_07667	A	A1S	Potri.002G260500	Potri.002G260500(AS)	POPTR_0002s26210	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07668	A	A1S	Potri.002G260700	Potri.002G260700(AS)	POPTR_0002s26220	sp|Q8RXN5|TYW1_ARATH	tRNA wybutosine-synthesizing protein 1 homolog OS=Arabidopsis thaliana GN=TYW1 PE=2 SV=1	AT1G75200.1	| Symbols: | flavodoxin family protein / radical SAM domain-containing protein | chr1:28220849-28223597 REVERSE LENGTH=647	LOC_Os03g56390.1	protein|tRNA wybutosine-synthesizing protein 1, putative, expressed	NA	NA	GO:0055114|oxidation-reduction process	GO:0003824|catalytic activity GO:0005506|iron ion binding GO:0010181|FMN binding GO:0016491|oxidoreductase activity GO:0051536|iron-sulfur cluster binding	GO:0005739|mitochondrion
pt2_07669	A	A1S	Potri.002G260800	Potri.002G260800(AS)	POPTR_0002s26230	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07670	A	A1S	Potri.002G260900	Potri.002G260900(AS)	POPTR_0002s26240	sp|Q8GUH2|Y1015_ARATH	Uncharacterized protein At1g01500 OS=Arabidopsis thaliana GN=At1g01500 PE=2 SV=1	AT1G75180.3	| Symbols: | Erythronate-4-phosphate dehydrogenase family protein | chr1:28216150-28217911 REVERSE LENGTH=315	LOC_Os03g56420.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005739|mitochondrion
pt2_07671	A	A1S	Potri.002G261000	Potri.002G261000(AS)	POPTR_0002s26250	sp|Q55CU8|RSC5_DICDI	Random slug protein 5 OS=Dictyostelium discoideum GN=rsc5 PE=2 SV=1	AT1G75170.2	| Symbols: | Sec14p-like phosphatidylinositol transfer family protein | chr1:28214405-28215686 FORWARD LENGTH=296	LOC_Os03g51430.2	protein|SEC14 cytosolic factor family protein, putative, expressed	IMGA|Medtr5g062310.1	Clavesin chr5 25079243-25077091 F EGN_Mt100125 20111014	GO:0006810|transport	GO:0005215|transporter activity	GO:0005886|plasma membrane
pt2_07672	A	A1S	Potri.002G261100	Potri.002G261100(AS)	POPTR_0002s26260	NA	NA	NA	NA	LOC_Os03g20930.1	protein|retrotransposon protein, putative, unclassified, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_07673	A	A2S	Potri.002G261600	Potri.002G261600(AS) Potri.002G261500(AS)	POPTR_0002s26270	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07674	A	A1S	Potri.002G261700	Potri.002G261700(AS)	POPTR_0002s26280	NA	NA	AT5G42710.2	| Symbols: | unknown protein; INVOLVED IN: biological_process unknown. | chr5:17125578-17128696 FORWARD LENGTH=803	LOC_Os03g56430.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	NA	GO:0005634|nucleus
pt2_07675	A	A1S	Potri.002G261800	Potri.002G261800(AS)	POPTR_0002s26290	sp|Q9M069|E137_ARATH	Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana GN=At4g34480 PE=1 SV=2	AT2G16230.1	| Symbols: | O-Glycosyl hydrolases family 17 protein | chr2:7035463-7038326 REVERSE LENGTH=503	LOC_Os03g46660.1	protein|glucan endo-1,3-beta-glucosidase precursor, putative, expressed	IMGA|Medtr5g085580.1	"Glucan endo-1,3-beta-glucosidase" chr5 35975309-35973056 F EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0043169|cation binding	GO:0005886|plasma membrane
pt2_07676	A	A2S	Potri.002G261900	Potri.002G261900(AS) Potri.002G261800(AA)	POPTR_0002s26295	sp|P32518|DUT_SOLLC	Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Solanum lycopersicum PE=2 SV=1	AT3G46940.1	| Symbols: DUT1 | DUTP-PYROPHOSPHATASE-LIKE 1 | chr3:17288367-17288867 REVERSE LENGTH=166	LOC_Os03g46640.1	protein|deoxyuridine 5-triphosphate nucleotidohydrolase, putative, expressed	NA	NA	GO:0006261|DNA-dependent DNA replication GO:0006281|DNA repair GO:0009394|2'-deoxyribonucleotide metabolic process GO:0046080|dUTP metabolic process	GO:0000287|magnesium ion binding GO:0004170|dUTP diphosphatase activity GO:0016787|hydrolase activity GO:0042802|identical protein binding	GO:0005829|cytosol
pt2_07677	A	A1S	Potri.002G262000	Potri.002G262000(AS)	POPTR_0002s26300	sp|P34795|G6PI_ARATH	Glucose-6-phosphate isomerase, cytosolic OS=Arabidopsis thaliana GN=PGIC PE=2 SV=1	AT5G42740.1	| Symbols: | Sugar isomerase (SIS) family protein | chr5:17136080-17140622 FORWARD LENGTH=560	NA	NA	NA	NA	GO:0006094|gluconeogenesis GO:0006096|glycolysis GO:0009744|response to sucrose stimulus GO:0009813|flavonoid biosynthetic process GO:0009817|defense response to fungus, incompatible interaction GO:0010224|response to UV-B GO:0046686|response to cadmium ion	GO:0004347|glucose-6-phosphate isomerase activity	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_07678	A	A1S	Potri.002G262300	Potri.002G262300(AS)	POPTR_0002s26310	NA	NA	AT5G42950.1	| Symbols: | GYF domain-containing protein | chr5:17224436-17231044 FORWARD LENGTH=1714	LOC_Os07g04530.1	protein|GYF domain containing protein, putative, expressed	NA	NA	GO:0009737|response to abscisic acid stimulus	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_07679	A	A1S	Potri.002G262300	Potri.002G262300(AS)	POPTR_0002s26310	NA	NA	AT5G42950.1	| Symbols: | GYF domain-containing protein | chr5:17224436-17231044 FORWARD LENGTH=1714	LOC_Os07g04530.1	protein|GYF domain containing protein, putative, expressed	NA	NA	GO:0009737|response to abscisic acid stimulus	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_07680	A	A1S	Potri.002G262300	Potri.002G262300(AS)	POPTR_0002s26310	NA	NA	AT5G42950.1	| Symbols: | GYF domain-containing protein | chr5:17224436-17231044 FORWARD LENGTH=1714	LOC_Os07g04530.1	protein|GYF domain containing protein, putative, expressed	NA	NA	GO:0009737|response to abscisic acid stimulus	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_07681	A	A1S	Potri.002G262400	Potri.002G262400(AS)	POPTR_0002s26320	NA	NA	AT1G75160.1	| Symbols: | Protein of unknown function (DUF620) | chr1:28209534-28211624 FORWARD LENGTH=395	LOC_Os01g55795.1	protein|expressed protein	IMGA|Medtr5g019880.1	hypothetical protein chr5 7285282-7288023 H EGN_Mt100125 20111014	GO:0008150|biological_process GO:0048610|cellular process involved in reproduction GO:0048868|pollen tube development	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_07682	A	A1S	Potri.002G262500	Potri.002G262500(AS)	POPTR_0002s26330	NA	NA	AT5G19650.1	| Symbols: ATOFP8, OFP8 | ovate family protein 8 | chr5:6639632-6640297 REVERSE LENGTH=221	LOC_Os10g38880.1	protein|DUF623 domain containing protein, expressed	IMGA|Medtr5g075210.1	Plant-specific domain TIGR01568 family protein chr5 30945292-30946341 E EGN_Mt100125 20111014	GO:0045892|negative regulation of transcription, DNA-dependent	NA	GO:0005634|nucleus
pt2_07683	A	A1S	Potri.002G262600	Potri.002G262600(AS)	POPTR_0002s26340	NA	NA	AT3G56870.1	| Symbols: | unknown protein; Has 204 Blast hits to 201 proteins in 58 species: Archae - 0; Bacteria - 10; Metazoa - 72; Fungi - 8; Plants - 41; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). | chr3:21053077-21055518 FORWARD LENGTH=700	LOC_Os03g39740.2	protein|expressed protein	NA	NA	GO:0006275|regulation of DNA replication GO:0006346|methylation-dependent chromatin silencing GO:0008150|biological_process GO:0009909|regulation of flower development GO:0010389|regulation of G2/M transition of mitotic cell cycle GO:0016458|gene silencing GO:0031048|chromatin silencing by small RNA GO:0034968|histone lysine methylation GO:0051567|histone H3-K9 methylation	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07684	A	A1S	Potri.002G262700	Potri.002G262700(AS)	POPTR_0002s26350	sp|Q1H5C9|OP24A_ARATH	Outer envelope pore protein 24A, chloroplastic OS=Arabidopsis thaliana GN=OEP24A PE=1 SV=1	AT1G45170.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42960.1); Has 62 Blast hits to 62 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:17096233-17097910 REVERSE LENGTH=213	LOC_Os03g63860.1	protein|DANA2, putative, expressed	NA	NA	GO:0008150|biological_process GO:0045036|protein targeting to chloroplast	GO:0003674|molecular_function	GO:0009536|plastid
pt2_07685	A	A1S	Potri.002G262800	Potri.002G262800(AS)	POPTR_0002s26360	NA	NA	AT1G75150.1	| Symbols: | unknown protein; Has 38228 Blast hits to 24529 proteins in 1168 species: Archae - 169; Bacteria - 4103; Metazoa - 14594; Fungi - 5866; Plants - 1861; Viruses - 317; Other Eukaryotes - 11318 (source: NCBI BLink). | chr1:28204709-28208512 REVERSE LENGTH=784	LOC_Os03g59480.1	protein|expressed protein	NA	NA	GO:0006270|DNA replication initiation GO:0006275|regulation of DNA replication GO:0006346|methylation-dependent chromatin silencing GO:0008150|biological_process GO:0016246|RNA interference GO:0051726|regulation of cell cycle	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07686	R	R	NA	NA	POPTR_0002s26370	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07687	A	A1S	Potri.002G263000	Potri.002G263000(AS)	POPTR_0002s26380	sp|Q559T8|Y0701_DICDI	Probable serine/threonine-protein kinase DDB_G0272282 OS=Dictyostelium discoideum GN=DDB_G0272282 PE=3 SV=1	AT1G45160.2	| Symbols: | Protein kinase superfamily protein | chr1:17083814-17090277 REVERSE LENGTH=1067	LOC_Os03g50390.1	protein|AGC_AGC_other_GWLd.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed	IMGA|Medtr5g069000.1	Microtubule-associated serine/threonine-protein kinase chr5 28211794-28220768 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus
pt2_07688	A	A1S	Potri.002G263000	Potri.002G263000(AS)	POPTR_0002s26380	sp|Q559T8|Y0701_DICDI	Probable serine/threonine-protein kinase DDB_G0272282 OS=Dictyostelium discoideum GN=DDB_G0272282 PE=3 SV=1	AT1G45160.2	| Symbols: | Protein kinase superfamily protein | chr1:17083814-17090277 REVERSE LENGTH=1067	LOC_Os03g50390.1	protein|AGC_AGC_other_GWLd.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed	IMGA|Medtr5g069000.1	Microtubule-associated serine/threonine-protein kinase chr5 28211794-28220768 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus
pt2_07689	B	B1S	Potri.001G000400	Potri.001G000400(BS)	POPTR_0002s26390	NA	NA	AT2G30942.1	| Symbols: | Protein of unknown function (DUF3317) | chr2:13170953-13171835 FORWARD LENGTH=56	LOC_Os07g26550.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_07690	A	A2S	Potri.002G263200	Potri.002G263200(AS) Potri.014G180800(DS)	POPTR_0002s26400	sp|Q8L5U0|CSN4_ARATH	COP9 signalosome complex subunit 4 OS=Arabidopsis thaliana GN=CSN4 PE=1 SV=2	AT5G42970.1	| Symbols: COP8, FUS4, EMB134, COP14, CSN4, FUS8, ATS4 | Proteasome component (PCI) domain protein | chr5:17237470-17240649 REVERSE LENGTH=397	LOC_Os03g10120.2	protein|proteasome subunit, putative, expressed	NA	NA	GO:0009640|photomorphogenesis GO:0010100|negative regulation of photomorphogenesis GO:0010388|cullin deneddylation	GO:0005515|protein binding	GO:0005829|cytosol GO:0008180|signalosome GO:0043234|protein complex
pt2_07691	A	A2S	Potri.002G263300	Potri.002G263300(AS) Potri.001G000400(DS)	POPTR_0002s26410	NA	NA	AT2G30942.1	| Symbols: | Protein of unknown function (DUF3317) | chr2:13170953-13171835 FORWARD LENGTH=56	LOC_Os07g26550.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_07692	A	A1S	Potri.002G263500	Potri.002G263500(AS)	POPTR_0002s26420	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07693	A	A1S	Potri.002G263600	Potri.002G263600(AS)	POPTR_0002s26430	sp|Q9ZWA6|MGP_ARATH	Zinc finger protein MAGPIE OS=Arabidopsis thaliana GN=MGP PE=1 SV=1	AT3G50700.1	| Symbols: AtIDD2, IDD2 | indeterminate(ID)-domain 2 | chr3:18840945-18842829 FORWARD LENGTH=452	LOC_Os01g14010.1	protein|ZOS1-05 - C2H2 zinc finger protein, expressed	IMGA|Medtr1g066550.1	Zinc finger protein chr1 16773119-16775124 H EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0006355|regulation of transcription, DNA-dependent GO:0006612|protein targeting to membrane GO:0009617|response to bacterium GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009965|leaf morphogenesis GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0030154|cell differentiation GO:0031348|negative regulation of defense response GO:0035304|regulation of protein dephosphorylation GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003676|nucleic acid binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_07694	A	A1S	Potri.002G263700	Potri.002G263700(AS)	POPTR_0002s26440	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07695	A	A1S	Potri.002G263800	Potri.002G263800(AS)	POPTR_0002s26640	sp|O48786|C734A_ARATH	Cytochrome P450 734A1 OS=Arabidopsis thaliana GN=CYP734A1 PE=2 SV=1	AT1G75130.1	| Symbols: CYP721A1 | cytochrome P450, family 721, subfamily A, polypeptide 1 | chr1:28200073-28201911 REVERSE LENGTH=505	LOC_Os05g33600.1	protein|cytochrome P450 72A1, putative, expressed	IMGA|Medtr5g095230.1	Cytochrome P450 monooxygenase CYP72A59 chr5 40593237-40587821 E EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	NA
pt2_07696	A	A1S	Potri.002G263900	Potri.002G263900(AS)	POPTR_0002s26650	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006863|purine nucleobase transport GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_07697	A	A1S	Potri.002G264000	Potri.002G264000(AS)	POPTR_0002s26660	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07698	B	B2S	Potri.T036700	Potri.T036700(BS) Potri.T036900(BS)	POPTR_0003s00200	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07699	A	A2S	Potri.T036500	Potri.T036500(AS) Potri.003G010500(DS)	POPTR_0003s00210	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07700	A	A1S	Potri.T036400	Potri.T036400(AS)	POPTR_0003s00220	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07701	A	A5A	Potri.T036200	Potri.T036200(AA) Potri.004G221000(DA) Potri.004G220700(DA) Potri.004G220400(DA) Potri.004G221200(DA)	POPTR_0003s00420	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0009691|cytokinin biosynthetic process	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_07702	A	A3S	Potri.003G010600	Potri.003G010600(AS) Potri.003G011000(AS) Potri.003G010800(BS)	POPTR_0003s00430	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07703	A	A3S	Potri.003G011100	Potri.003G011100(AS) Potri.003G010700(DS) Potri.003G010900(DS)	POPTR_0003s00450	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0010167|response to nitrate GO:0010200|response to chitin GO:0015706|nitrate transport GO:0045892|negative regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_07704	A	A1S	Potri.003G011200	Potri.003G011200(AS)	POPTR_0003s00460	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07705	A	A1S	Potri.T036100	Potri.T036100(AS)	POPTR_0003s00470	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07706	C	C3S	Potri.003G011300	Potri.003G011300(CS) Potri.003G014300(CS) Potri.003G011700(CS)	sp|Q8W3M6|UBCP_ARATH	Ubiquitin-like domain-containing CTD phosphatase OS=Arabidopsis thaliana GN=At4g06599 PE=2 SV=1	AT4G06599.1	| Symbols: | ubiquitin family protein | chr4:3666079-3667495 REVERSE LENGTH=340	LOC_Os01g65450.2	protein|ubiquitin-like domain-containing CTD phosphatase 1, putative, expressed	NA	NA	NA	GO:0004721|phosphoprotein phosphatase activity	GO:0005634|nucleus
pt2_07707	C	C1S	Potri.003G011500	Potri.003G011500(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07708	C	C1S	Potri.003G011600	Potri.003G011600(CS)	sp|P60621|COX1_RAPSA	Cytochrome c oxidase subunit 1 OS=Raphanus sativus GN=COX1 PE=3 SV=1	ATMG01360.1	| Symbols: COX1 | cytochrome oxidase | chrM:349830-351413 REVERSE LENGTH=527	LOC_Os12g33946.1	protein|cytochrome c oxidase subunit 1, putative, expressed	NA	NA	GO:0006810|transport GO:0009060|aerobic respiration GO:0022900|electron transport chain GO:0022904|respiratory electron transport chain GO:0055114|oxidation-reduction process	GO:0004129|cytochrome-c oxidase activity GO:0005506|iron ion binding GO:0005507|copper ion binding GO:0009055|electron carrier activity GO:0020037|heme binding	GO:0005739|mitochondrion GO:0005751|mitochondrial respiratory chain complex IV GO:0005886|plasma membrane GO:0016021|integral to membrane
pt2_07709	C	C3S	Potri.003G014300	Potri.003G014300(CS) Potri.003G011300(CS) Potri.003G011700(CS)	sp|Q8W3M6|UBCP_ARATH	Ubiquitin-like domain-containing CTD phosphatase OS=Arabidopsis thaliana GN=At4g06599 PE=2 SV=1	AT4G06599.1	| Symbols: | ubiquitin family protein | chr4:3666079-3667495 REVERSE LENGTH=340	LOC_Os01g65450.2	protein|ubiquitin-like domain-containing CTD phosphatase 1, putative, expressed	NA	NA	NA	GO:0004721|phosphoprotein phosphatase activity	GO:0005634|nucleus
pt2_07710	B	B2S	Potri.T036700	Potri.T036700(BS) Potri.T036800(BS)	POPTR_0003s00530	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07711	R	R	NA	NA	POPTR_0003s00540	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07712	A	A1S	Potri.012G004000	Potri.012G004000(AS)	POPTR_0003s00750	NA	NA	AT4G27870.1	| Symbols: | Vacuolar iron transporter (VIT) family protein | chr4:13878983-13882679 FORWARD LENGTH=761	LOC_Os06g01440.1	protein|integral membrane protein, putative, expressed	IMGA|Medtr5g068580.1	Integral membrane protein-like protein chr5 28055302-28049489 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0016020|membrane GO:0016021|integral to membrane
pt2_07713	A	A4S	Potri.003G000300	Potri.003G000300(AS) Potri.008G001900(DS) Potri.003G000200(DS) Potri.004G000200(DS)	POPTR_0003s00790	NA	NA	NA	NA	NA	NA	IMGA|Medtr5g062140.1	hypothetical protein chr5 25005759-25007108 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003676|nucleic acid binding GO:0008270|zinc ion binding	GO:0005575|cellular_component
pt2_07714	A	A1S	Potri.003G000400	Potri.003G000400(AS)	POPTR_0003s00800	sp|Q9SB61|Y4466_ARATH	ZF-HD homeobox protein At4g24660 OS=Arabidopsis thaliana GN=At4g24660 PE=1 SV=1	AT1G14440.2	| Symbols: AtHB31, HB31, ZHD4 | homeobox protein 31 | chr1:4939076-4940014 REVERSE LENGTH=312	LOC_Os09g29130.1	protein|ZF-HD protein dimerisation region containing protein, expressed	IMGA|Medtr5g020510.1	Zinc finger-homeodomain protein chr5 7579898-7580779 H EGN_Mt100125 20111014	NA	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07715	A	A1S	Potri.003G000500	Potri.003G000500(AS)	POPTR_0003s00810	sp|Q8L5Y6|CAND1_ARATH	Cullin-associated NEDD8-dissociated protein 1 OS=Arabidopsis thaliana GN=CAND1 PE=1 SV=1	AT2G02560.2	| Symbols: CAND1, ATCAND1, ETA2, TIP120, HVE | cullin-associated and neddylation dissociated | chr2:690345-697342 FORWARD LENGTH=1217	LOC_Os02g07120.1	protein|HEAT repeat family protein, putative, expressed	NA	NA	GO:0003002|regionalization GO:0007155|cell adhesion GO:0009640|photomorphogenesis GO:0009733|response to auxin stimulus GO:0009790|embryo development GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009909|regulation of flower development GO:0009933|meristem structural organization GO:0010051|xylem and phloem pattern formation GO:0010090|trichome morphogenesis GO:0010162|seed dormancy process GO:0010182|sugar mediated signaling pathway GO:0010228|vegetative to reproductive phase transition of meristem GO:0016567|protein ubiquitination GO:0019915|lipid storage GO:0033043|regulation of organelle organization GO:0045010|actin nucleation GO:0048316|seed development GO:0048449|floral organ formation GO:0048765|root hair cell differentiation GO:0050826|response to freezing GO:0071555|cell wall organization	GO:0005515|protein binding	GO:0005618|cell wall GO:0005634|nucleus GO:0005829|cytosol GO:0005886|plasma membrane
pt2_07716	B	B1S	Potri.T007900	Potri.T007900(BS)	POPTR_0003s00830	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07717	G	G5	NA	NA	POPTR_0003s00830	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07718	A	A1S	Potri.003G000600	Potri.003G000600(AS)	POPTR_0003s00840	NA	NA	AT2G02570.4	| Symbols: | nucleic acid binding;RNA binding | chr2:698361-700794 REVERSE LENGTH=300	LOC_Os08g01840.1	protein|nucleic acid binding protein, putative, expressed	NA	NA	GO:0006397|mRNA processing GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process	GO:0003723|RNA binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_07719	R	R	NA	NA	POPTR_0003s00850	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07720	A	A1S	Potri.003G000800	Potri.003G000800(AS)	POPTR_0003s00860	sp|Q93VV5|PTR16_ARATH	Probable peptide/nitrate transporter At1g59740 OS=Arabidopsis thaliana GN=At1g59740 PE=2 SV=1	AT1G59740.1	| Symbols: | Major facilitator superfamily protein | chr1:21968227-21972312 FORWARD LENGTH=591	LOC_Os04g36040.1	protein|peptide transporter PTR2, putative, expressed	IMGA|Medtr5g038380.1	Nitrate transporter NTL1 chr5 16398082-16404412 E EGN_Mt100125 20111014	GO:0006857|oligopeptide transport GO:0009624|response to nematode	GO:0005215|transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_07721	B	B1A	Potri.003G000900	Potri.003G000900(BA)	POPTR_0003s00870	NA	NA	AT5G49880.1	| Symbols: | mitotic checkpoint family protein | chr5:20282305-20287775 FORWARD LENGTH=726	LOC_Os01g65580.3	protein|mitotic checkpoint family protein, putative, expressed	NA	NA	GO:0007093|mitotic cell cycle checkpoint GO:0009630|gravitropism	NA	GO:0005634|nucleus GO:0005635|nuclear envelope
pt2_07722	A	A1S	Potri.003G000900	Potri.003G000900(AS)	POPTR_0003s00880	NA	NA	AT5G49880.1	| Symbols: | mitotic checkpoint family protein | chr5:20282305-20287775 FORWARD LENGTH=726	LOC_Os01g65580.3	protein|mitotic checkpoint family protein, putative, expressed	NA	NA	GO:0007093|mitotic cell cycle checkpoint GO:0009630|gravitropism	NA	GO:0005634|nucleus GO:0005635|nuclear envelope
pt2_07723	A	A1S	Potri.003G001000	Potri.003G001000(AS)	POPTR_0003s00890	sp|Q8L7G0|ARFA_ARATH	Auxin response factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2	AT1G59750.4	| Symbols: ARF1 | auxin response factor 1 | chr1:21980414-21984193 FORWARD LENGTH=660	LOC_Os04g36054.1	protein|auxin response factor 9, putative, expressed	IMGA|Medtr5g076270.1	Auxin response factor chr5 31499972-31490689 E EGN_Mt100125 20111014	GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0006346|methylation-dependent chromatin silencing GO:0006355|regulation of transcription, DNA-dependent GO:0007267|cell-cell signaling GO:0009616|virus induced gene silencing GO:0009725|response to hormone stimulus GO:0009733|response to auxin stimulus GO:0010150|leaf senescence GO:0010267|production of ta-siRNAs involved in RNA interference GO:0016246|RNA interference GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0045892|negative regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_07724	A	A1S	Potri.003G001100	Potri.003G001100(AS)	POPTR_0003s00900	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07725	A	A1S	Potri.003G001200	Potri.003G001200(AS)	POPTR_0003s00910	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_07726	A	A1S	Potri.003G001300	Potri.003G001300(AS)	POPTR_0003s00920	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07727	A	A1S	Potri.003G001400	Potri.003G001400(AS)	POPTR_0003s00930	sp|Q9SE83|DRP2A_ARATH	Dynamin-2A OS=Arabidopsis thaliana GN=DRP2A PE=1 SV=2	AT1G10290.1	| Symbols: ADL6, DRP2A | dynamin-like protein 6 | chr1:3370774-3377120 FORWARD LENGTH=914	LOC_Os02g50550.1	protein|dynamin, putative, expressed	IMGA|Medtr5g009150.1	Dynamin-related protein 1A chr5 1886432-1881144 H EGN_Mt100125 20111014	GO:0009737|response to abscisic acid stimulus GO:0072583|clathrin-mediated endocytosis	GO:0003924|GTPase activity GO:0005515|protein binding GO:0005525|GTP binding GO:0005543|phospholipid binding GO:0030276|clathrin binding	GO:0005737|cytoplasm GO:0005773|vacuole GO:0005829|cytosol GO:0005886|plasma membrane GO:0009504|cell plate GO:0009506|plasmodesma GO:0045334|clathrin-coated endocytic vesicle
pt2_07728	A	A2S	Potri.003G002300	Potri.003G002300(AS) Potri.003G001500(AS)	POPTR_0003s00940	sp|Q96282|CLCC_ARATH	Chloride channel protein CLC-c OS=Arabidopsis thaliana GN=CLC-C PE=1 SV=1	AT5G49890.1	| Symbols: CLC-C, ATCLC-C | chloride channel C | chr5:20288489-20292143 REVERSE LENGTH=779	LOC_Os02g35190.1	protein|chloride channel protein, putative, expressed	IMGA|Medtr5g005990.3	Chloride channel protein CLC-d chr5 468933-479871 F EGN_Mt100125 20111014	GO:0006821|chloride transport GO:0055085|transmembrane transport	GO:0005216|ion channel activity GO:0005247|voltage-gated chloride channel activity GO:0005253|anion channel activity	GO:0005622|intracellular GO:0005774|vacuolar membrane GO:0009705|plant-type vacuole membrane GO:0016020|membrane
pt2_07729	A	A2S	Potri.003G001600	Potri.003G001600(AS) Potri.003G002400(AS)	POPTR_0003s00950	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07730	A	A3S	Potri.003G001700	Potri.003G001700(AS) Potri.003G002400(AS) Potri.004G228100(DS)	POPTR_0003s00960	NA	NA	AT1G10280.1	| Symbols: | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein | chr1:3366795-3368739 REVERSE LENGTH=412	LOC_Os08g01890.1	protein|DNA binding protein, putative, expressed	IMGA|Medtr5g055480.1	hypothetical protein chr5 22301699-22299299 E EGN_Mt100125 20111014	NA	GO:0016757|transferase activity, transferring glycosyl groups	GO:0005575|cellular_component GO:0005739|mitochondrion GO:0016020|membrane
pt2_07731	A	A1S	Potri.003G001800	Potri.003G001800(AS)	POPTR_0003s00970	sp|Q94KB9|MLO3_ARATH	MLO-like protein 3 OS=Arabidopsis thaliana GN=MLO3 PE=2 SV=1	AT3G45290.1	| Symbols: MLO3, ATMLO3 | Seven transmembrane MLO family protein | chr3:16617586-16621352 FORWARD LENGTH=508	LOC_Os06g29110.1	protein|MLO domain containing protein, putative, expressed	IMGA|Medtr5g024700.1	Mlo family protein chr5 9668004-9673094 H EGN_Mt100125 20111014	GO:0006952|defense response GO:0008219|cell death	GO:0005516|calmodulin binding	GO:0005634|nucleus GO:0005886|plasma membrane GO:0016021|integral to membrane
pt2_07732	A	A4S	Potri.003G001900	Potri.003G001900(AS) Potri.003G002800(BS) Potri.T151500(BS) Potri.003G002100(DS)	POPTR_0003s00980	sp|P83948|PME3_CITSI	Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1	AT3G14310.1	| Symbols: ATPME3, PME3 | pectin methylesterase 3 | chr3:4772214-4775095 REVERSE LENGTH=592	LOC_Os01g21034.1	protein|pectinesterase, putative, expressed	IMGA|Medtr1g008140.1	Pectinesterase chr1 1318675-1315083 E EGN_Mt100125 20111014	GO:0006546|glycine catabolic process GO:0006569|tryptophan catabolic process GO:0009624|response to nematode GO:0009684|indoleacetic acid biosynthetic process GO:0042545|cell wall modification	GO:0004857|enzyme inhibitor activity GO:0030599|pectinesterase activity	GO:0005618|cell wall GO:0005737|cytoplasm GO:0005886|plasma membrane GO:0048046|apoplast
pt2_07733	C	C2S	Potri.003G002700	Potri.003G002700(CS) Potri.003G002000(CS)	NA	NA	AT1G10280.1	| Symbols: | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein | chr1:3366795-3368739 REVERSE LENGTH=412	LOC_Os03g52120.1	protein|DNA binding protein, putative, expressed	IMGA|Medtr5g055480.1	hypothetical protein chr5 22301699-22299299 E EGN_Mt100125 20111014	NA	GO:0016757|transferase activity, transferring glycosyl groups	GO:0005575|cellular_component GO:0005739|mitochondrion GO:0016020|membrane
pt2_07734	A	A1S	Potri.003G002100	Potri.003G002100(AS)	POPTR_0003s00990	sp|P83948|PME3_CITSI	Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1	AT3G14310.1	| Symbols: ATPME3, PME3 | pectin methylesterase 3 | chr3:4772214-4775095 REVERSE LENGTH=592	LOC_Os01g21034.1	protein|pectinesterase, putative, expressed	IMGA|Medtr1g008140.1	Pectinesterase chr1 1318675-1315083 E EGN_Mt100125 20111014	GO:0006546|glycine catabolic process GO:0006569|tryptophan catabolic process GO:0009624|response to nematode GO:0009684|indoleacetic acid biosynthetic process GO:0042545|cell wall modification	GO:0004857|enzyme inhibitor activity GO:0030599|pectinesterase activity	GO:0005618|cell wall GO:0005737|cytoplasm GO:0005886|plasma membrane GO:0048046|apoplast
pt2_07735	A	A2S	Potri.003G002700	Potri.003G002700(AS) Potri.003G002000(DS)	POPTR_0003s01000	NA	NA	AT1G10280.1	| Symbols: | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein | chr1:3366795-3368739 REVERSE LENGTH=412	LOC_Os03g52120.1	protein|DNA binding protein, putative, expressed	IMGA|Medtr5g055480.1	hypothetical protein chr5 22301699-22299299 E EGN_Mt100125 20111014	NA	GO:0016757|transferase activity, transferring glycosyl groups	GO:0005575|cellular_component GO:0005739|mitochondrion GO:0016020|membrane
pt2_07736	A	A2S	Potri.003G014500	Potri.003G014500(AS) Potri.003G014800(BS)	POPTR_0003s01010	NA	NA	AT1G58110.2	| Symbols: | Basic-leucine zipper (bZIP) transcription factor family protein | chr1:21515919-21517374 REVERSE LENGTH=374	LOC_Os11g11100.1	protein|bZIP transcription factor domain containing protein, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0006486|protein glycosylation GO:0009612|response to mechanical stimulus GO:0019722|calcium-mediated signaling	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_07737	A	A1S	Potri.003G014600	Potri.003G014600(AS)	POPTR_0003s01020	sp|Q8W3M7|Y4598_ARATH	Uncharacterized protein At4g06598 OS=Arabidopsis thaliana GN=At4g06598 PE=2 SV=2	AT1G58110.2	| Symbols: | Basic-leucine zipper (bZIP) transcription factor family protein | chr1:21515919-21517374 REVERSE LENGTH=374	NA	NA	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0006486|protein glycosylation GO:0009612|response to mechanical stimulus GO:0019722|calcium-mediated signaling	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_07738	A	A1S	Potri.003G014700	Potri.003G014700(AS)	POPTR_0003s01030	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07739	B	B1S	Potri.003G014800	Potri.003G014800(BS)	POPTR_0003s01040	sp|Q8W3M7|Y4598_ARATH	Uncharacterized protein At4g06598 OS=Arabidopsis thaliana GN=At4g06598 PE=2 SV=2	AT1G58110.2	| Symbols: | Basic-leucine zipper (bZIP) transcription factor family protein | chr1:21515919-21517374 REVERSE LENGTH=374	LOC_Os12g09250.1	protein|bZIP transcription factor domain containing protein, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0006486|protein glycosylation GO:0009612|response to mechanical stimulus GO:0019722|calcium-mediated signaling	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_07740	A	A2S	Potri.003G014900	Potri.003G014900(AS) Potri.004G219000(DS)	POPTR_0003s01050	sp|O35900|LSM2_MOUSE	U6 snRNA-associated Sm-like protein LSm2 OS=Mus musculus GN=Lsm2 PE=2 SV=1	AT1G03330.1	| Symbols: | Small nuclear ribonucleoprotein family protein | chr1:818161-819297 REVERSE LENGTH=93	NA	NA	NA	NA	NA	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005732|small nucleolar ribonucleoprotein complex GO:0005829|cytosol
pt2_07741	A	A1S	Potri.003G015000	Potri.003G015000(AS)	POPTR_0003s01060	sp|Q9C5Y0|PLDD1_ARATH	Phospholipase D delta OS=Arabidopsis thaliana GN=PLDDELTA PE=1 SV=2	AT4G35790.2	| Symbols: ATPLDDELTA, PLDDELTA | phospholipase D delta | chr4:16955774-16959875 REVERSE LENGTH=857	LOC_Os07g15680.1	protein|phospholipase D, putative, expressed	IMGA|Medtr5g023050.1	Phospholipase D delta isoform chr5 8894018-8906093 E EGN_Mt100125 20111014	GO:0009409|response to cold GO:0009789|positive regulation of abscisic acid mediated signaling pathway GO:0012501|programmed cell death GO:0046473|phosphatidic acid metabolic process GO:0090333|regulation of stomatal closure	GO:0003824|catalytic activity GO:0004630|phospholipase D activity GO:0005509|calcium ion binding	GO:0005773|vacuole GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0015630|microtubule cytoskeleton GO:0016020|membrane
pt2_07742	A	A1S	Potri.003G015000	Potri.003G015000(AS)	POPTR_0003s01070	sp|Q9C5Y0|PLDD1_ARATH	Phospholipase D delta OS=Arabidopsis thaliana GN=PLDDELTA PE=1 SV=2	AT4G35790.2	| Symbols: ATPLDDELTA, PLDDELTA | phospholipase D delta | chr4:16955774-16959875 REVERSE LENGTH=857	LOC_Os07g15680.1	protein|phospholipase D, putative, expressed	IMGA|Medtr5g023050.1	Phospholipase D delta isoform chr5 8894018-8906093 E EGN_Mt100125 20111014	GO:0009409|response to cold GO:0009789|positive regulation of abscisic acid mediated signaling pathway GO:0012501|programmed cell death GO:0046473|phosphatidic acid metabolic process GO:0090333|regulation of stomatal closure	GO:0003824|catalytic activity GO:0004630|phospholipase D activity GO:0005509|calcium ion binding	GO:0005773|vacuole GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0015630|microtubule cytoskeleton GO:0016020|membrane
pt2_07743	A	A1S	Potri.003G015100	Potri.003G015100(AS)	POPTR_0003s01080	sp|Q38732|DAG_ANTMA	DAG protein, chloroplastic OS=Antirrhinum majus GN=DAG PE=2 SV=1	AT4G20020.2	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr4:10844360-10846085 REVERSE LENGTH=406	LOC_Os11g11020.1	protein|DAG protein, chloroplast precursor, putative, expressed	NA	NA	GO:1900864|mitochondrial RNA modification GO:1900865|chloroplast RNA modification	NA	GO:0005739|mitochondrion
pt2_07744	A	A1S	Potri.003G015100	Potri.003G015100(AS)	POPTR_0003s01080	sp|Q38732|DAG_ANTMA	DAG protein, chloroplastic OS=Antirrhinum majus GN=DAG PE=2 SV=1	AT4G20020.2	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr4:10844360-10846085 REVERSE LENGTH=406	LOC_Os11g11020.1	protein|DAG protein, chloroplast precursor, putative, expressed	NA	NA	GO:1900864|mitochondrial RNA modification GO:1900865|chloroplast RNA modification	NA	GO:0005739|mitochondrion
pt2_07745	A	A1S	Potri.003G015200	Potri.003G015200(AS)	POPTR_0003s01090	sp|Q9ZTS2|FER_CAPAN	Ferredoxin, chloroplastic OS=Capsicum annuum GN=AP1 PE=1 SV=1	AT1G60950.1	| Symbols: FED A, ATFD2 | 2Fe-2S ferredoxin-like superfamily protein | chr1:22444565-22445011 FORWARD LENGTH=148	LOC_Os08g01380.1	protein|2Fe-2S iron-sulfur cluster binding domain containing protein, expressed	IMGA|Medtr5g006320.1	Ferredoxin chr5 620236-619542 F EGN_Mt100125 20111014	GO:0009416|response to light stimulus GO:0009637|response to blue light GO:0009644|response to high light intensity GO:0009744|response to sucrose stimulus GO:0009767|photosynthetic electron transport chain GO:0009773|photosynthetic electron transport in photosystem I GO:0010114|response to red light GO:0010155|regulation of proton transport GO:0010207|photosystem II assembly GO:0010218|response to far red light GO:0022900|electron transport chain GO:0042742|defense response to bacterium	GO:0009055|electron carrier activity GO:0051536|iron-sulfur cluster binding GO:0051537|2 iron, 2 sulfur cluster binding	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_07746	A	A2S	Potri.003G015300	Potri.003G015300(AS) Potri.004G218300(BS)	POPTR_0003s01100	sp|Q9ET30|TM9S3_MOUSE	Transmembrane 9 superfamily member 3 OS=Mus musculus GN=Tm9sf3 PE=1 SV=1	AT1G10950.1	| Symbols: TMN1, AtTMN1 | transmembrane nine 1 | chr1:3659322-3663622 FORWARD LENGTH=589	LOC_Os11g07910.1	protein|transmembrane 9 superfamily member, putative, expressed	IMGA|Medtr5g077170.1	Transmembrane 9 superfamily protein member chr5 31932425-31936498 H EGN_Mt100125 20111014	NA	NA	GO:0005576|extracellular region GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005797|Golgi medial cisterna GO:0005801|cis-Golgi network GO:0005802|trans-Golgi network GO:0016020|membrane GO:0016021|integral to membrane
pt2_07747	A	A1S	Potri.003G015400	Potri.003G015400(AS)	POPTR_0003s01110	sp|P43291|SRK2A_ARATH	Serine/threonine-protein kinase SRK2A OS=Arabidopsis thaliana GN=SRK2A PE=1 SV=1	AT1G10940.1	| Symbols: ASK1, SNRK2-4, SNRK2.4, SRK2A | Protein kinase superfamily protein | chr1:3656050-3658170 REVERSE LENGTH=363	LOC_Os04g35240.1	protein|CAMK_CAMK_like.25 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	IMGA|Medtr5g013550.1	Serine/threonine protein kinase chr5 4065990-4061969 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006970|response to osmotic stress GO:0009651|response to salt stress GO:0048527|lateral root development	GO:0004672|protein kinase activity GO:0016301|kinase activity GO:0070300|phosphatidic acid binding	GO:0005829|cytosol GO:0005886|plasma membrane
pt2_07748	A	A1S	Potri.003G017100	Potri.003G017100(AS)	POPTR_0003s01120	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07749	B	B2S	Potri.003G017200	Potri.003G017200(BS) Potri.014G003800(DS)	POPTR_0003s01130	sp|Q7XA42|RGA1_SOLBU	Putative disease resistance protein RGA1 OS=Solanum bulbocastanum GN=RGA1 PE=2 SV=2	AT3G14470.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr3:4857940-4861104 FORWARD LENGTH=1054	LOC_Os05g41290.1	protein|disease resistance RPP13-like protein 1, putative, expressed	IMGA|Medtr5g095910.1	NB-LRR type disease resistance protein Rps1-k-2 chr5 40893619-40897389 H EGN_Mt100125 20111014	GO:0006952|defense response	GO:0043531|ADP binding	GO:0005634|nucleus
pt2_07750	A	A5S	Potri.003G015400	Potri.003G015400(AS) Potri.003G015600(AS) Potri.003G017300(AS) Potri.004G218200(BS) Potri.T172500(BS)	POPTR_0003s01140	sp|P43291|SRK2A_ARATH	Serine/threonine-protein kinase SRK2A OS=Arabidopsis thaliana GN=SRK2A PE=1 SV=1	AT1G10940.1	| Symbols: ASK1, SNRK2-4, SNRK2.4, SRK2A | Protein kinase superfamily protein | chr1:3656050-3658170 REVERSE LENGTH=363	LOC_Os04g35240.1	protein|CAMK_CAMK_like.25 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	IMGA|Medtr5g013550.1	Serine/threonine protein kinase chr5 4065990-4061969 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006970|response to osmotic stress GO:0009651|response to salt stress GO:0048527|lateral root development	GO:0004672|protein kinase activity GO:0016301|kinase activity GO:0070300|phosphatidic acid binding	GO:0005829|cytosol GO:0005886|plasma membrane
pt2_07751	A	A2S	Potri.003G015700	Potri.003G015700(AS) Potri.003G017400(AS)	POPTR_0003s01150	sp|P61422|THIED_GEOSL	Thiamine biosynthesis bifunctional protein ThiED OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) GN=thiDE PE=3 SV=1	AT1G22940.1	| Symbols: TH1, TH-1, THIE | thiamin biosynthesis protein, putative | chr1:8122384-8124908 FORWARD LENGTH=522	LOC_Os12g09000.1	protein|phosphomethylpyrimidine kinase/thiamin-phosphate pyrophosphorylase, putative, expressed	NA	NA	GO:0009228|thiamine biosynthetic process	GO:0003824|catalytic activity GO:0004789|thiamine-phosphate diphosphorylase activity GO:0008902|hydroxymethylpyrimidine kinase activity GO:0008972|phosphomethylpyrimidine kinase activity	GO:0005737|cytoplasm GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_07752	A	A2S	Potri.003G015800	Potri.003G015800(AS) Potri.003G017500(AS)	POPTR_0003s01160	sp|Q8L840|RQL4A_ARATH	ATP-dependent DNA helicase Q-like 4A OS=Arabidopsis thaliana GN=RECQL4A PE=2 SV=1	AT1G10930.1	| Symbols: ATSGS1, RECQ4A, ATRECQ4A | DNA helicase (RECQl4A) | chr1:3648032-3654997 REVERSE LENGTH=1188	LOC_Os04g35420.1	protein|helicase conserved C-terminal domain containing protein, expressed	IMGA|Medtr5g026590.1	ATP-dependent DNA helicase RecQ family protein expressed chr5 10702126-10688558 E EGN_Mt100125 20111014	GO:0000724|double-strand break repair via homologous recombination GO:0006260|DNA replication GO:0006281|DNA repair GO:0006310|DNA recombination GO:0006974|response to DNA damage stimulus GO:0010228|vegetative to reproductive phase transition of meristem GO:0051276|chromosome organization GO:0070417|cellular response to cold GO:0071215|cellular response to abscisic acid stimulus	GO:0003676|nucleic acid binding GO:0004386|helicase activity GO:0005524|ATP binding GO:0008026|ATP-dependent helicase activity GO:0043138|3'-5' DNA helicase activity GO:0043140|ATP-dependent 3'-5' DNA helicase activity	GO:0005622|intracellular GO:0005634|nucleus GO:0009506|plasmodesma
pt2_07753	A	A6S	Potri.003G017600	Potri.003G017600(AS) Potri.003G015900(BS) Potri.003G016200(DS) Potri.003G018300(DS) Potri.003G018100(DS) Potri.003G017000(DS)	POPTR_0003s01170	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07754	A	A1S	Potri.003G017800	Potri.003G017800(AS)	POPTR_0003s01180	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07755	A	A9S	Potri.003G017000	Potri.003G017000(AS) Potri.003G015900(DS) Potri.003G016400(DS) Potri.003G016200(DS) Potri.003G017600(DS) Potri.003G018300(DS) Potri.003G016100(DS) Potri.003G018100(DS) Potri.003G016500(DS)	POPTR_0003s01190	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07756	A	A4S	Potri.003G016400	Potri.003G016400(AS) Potri.003G016200(DS) Potri.003G016100(DS) Potri.003G017000(DS)	POPTR_0003s01200	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07757	G	G2	NA	NA	POPTR_0003s01210	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07758	A	A3S	Potri.003G017700	Potri.003G017700(AS) Potri.003G018200(AA) Potri.003G016800(DA)	POPTR_0003s01230	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07759	A	A10S	Potri.003G018400	Potri.003G018400(AS) Potri.003G016700(BS) Potri.003G016100(BS) Potri.003G016400(DS) Potri.003G016200(DS) Potri.003G016000(DS) Potri.003G018300(DS) Potri.003G018100(DS) Potri.003G016500(DS) Potri.003G017000(DS)	POPTR_0003s01240	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07760	B	B2S	Potri.003G018000	Potri.003G018000(BS) Potri.003G018300(BS)	POPTR_0003s01245	sp|Q9SJZ3|PP169_ARATH	Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2 SV=1	AT2G22410.1	| Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080 FORWARD LENGTH=681	LOC_Os12g13110.1	protein|pentatricopeptide, putative, expressed	IMGA|Medtr5g006420.1	Pentatricopeptide repeat-containing protein chr5 674856-677668 E EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005739|mitochondrion
pt2_07761	B	B1S	Potri.003G018500	Potri.003G018500(BS)	POPTR_0003s01250	sp|Q9NUJ3|T11L1_HUMAN	T-complex protein 11-like protein 1 OS=Homo sapiens GN=TCP11L1 PE=1 SV=1	AT1G22930.1	| Symbols: | T-complex protein 11 | chr1:8117521-8121854 FORWARD LENGTH=1131	LOC_Os04g35840.1	protein|T-complex protein 11, putative, expressed	NA	NA	GO:0008150|biological_process	NA	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_07762	A	A1S	Potri.003G018700	Potri.003G018700(AS)	POPTR_0003s01260	NA	NA	AT1G22030.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G77855.1); Has 99 Blast hits to 99 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 96; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:7759337-7760415 REVERSE LENGTH=333	LOC_Os01g65420.1	protein|expressed protein	IMGA|Medtr5g060880.1	hypothetical protein chr5 24528016-24526257 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_07763	A	A1S	Potri.003G018800	Potri.003G018800(AS)	POPTR_0003s01270	sp|Q38898|AKT2_ARATH	Potassium channel AKT2/3 OS=Arabidopsis thaliana GN=AKT2 PE=1 SV=1	AT4G22200.1	| Symbols: AKT2/3, AKT3, AKT2, KT2/3 | potassium transport 2/3 | chr4:11746666-11750091 REVERSE LENGTH=802	LOC_Os05g35410.1	protein|potassium channel AKT2/3, putative, expressed	IMGA|Medtr5g077770.1	Potassium channel SKOR chr5 32204180-32193756 E EGN_Mt100125 20111014	GO:0006811|ion transport GO:0006813|potassium ion transport GO:0009737|response to abscisic acid stimulus GO:0010264|myo-inositol hexakisphosphate biosynthetic process GO:0042391|regulation of membrane potential GO:0055085|transmembrane transport	GO:0005216|ion channel activity GO:0005242|inward rectifier potassium channel activity GO:0005249|voltage-gated potassium channel activity GO:0005515|protein binding GO:0030551|cyclic nucleotide binding GO:0042802|identical protein binding	GO:0009506|plasmodesma GO:0016020|membrane
pt2_07764	A	A1S	Potri.003G018900	Potri.003G018900(AS)	POPTR_0003s01280	sp|Q0WL80|UGGG_ARATH	UDP-glucose:glycoprotein glucosyltransferase OS=Arabidopsis thaliana GN=UGGT PE=1 SV=1	AT1G71220.2	| Symbols: EBS1 | UDP-glucose:glycoprotein glucosyltransferases;transferases, transferring hexosyl groups;transferases, transferring glycosyl groups | chr1:26841664-26851730 FORWARD LENGTH=1614	LOC_Os02g44510.1	protein|UDP-glucose glycoprotein glucosyltransferase 1 precursor, putative, expressed	NA	NA	GO:0006486|protein glycosylation GO:0009626|plant-type hypersensitive response GO:0009627|systemic acquired resistance GO:0009751|response to salicylic acid stimulus GO:0010204|defense response signaling pathway, resistance gene-independent GO:0016051|carbohydrate biosynthetic process GO:0034976|response to endoplasmic reticulum stress GO:0046283|anthocyanin-containing compound metabolic process	GO:0003980|UDP-glucose:glycoprotein glucosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups	GO:0005783|endoplasmic reticulum GO:0009507|chloroplast
pt2_07765	A	A1S	Potri.003G019000	Potri.003G019000(AS)	POPTR_0003s01310	sp|Q0WVV0|PPR31_ARATH	Pentatricopeptide repeat-containing protein At1g10910, chloroplastic OS=Arabidopsis thaliana GN=At1g10910 PE=2 SV=1	AT1G10910.1	| Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:3639908-3643974 FORWARD LENGTH=664	LOC_Os01g37870.1	protein|PPR repeat domain containing protein, putative, expressed	IMGA|Medtr5g008300.1	Pentatricopeptide repeat-containing protein chr5 1493031-1498664 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0008150|biological_process	NA	GO:0005739|mitochondrion
pt2_07766	A	A1S	Potri.003G019000	Potri.003G019000(AS)	POPTR_0003s01320	sp|Q0WVV0|PPR31_ARATH	Pentatricopeptide repeat-containing protein At1g10910, chloroplastic OS=Arabidopsis thaliana GN=At1g10910 PE=2 SV=1	AT1G10910.1	| Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:3639908-3643974 FORWARD LENGTH=664	LOC_Os01g37870.1	protein|PPR repeat domain containing protein, putative, expressed	IMGA|Medtr5g008300.1	Pentatricopeptide repeat-containing protein chr5 1493031-1498664 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0008150|biological_process	NA	GO:0005739|mitochondrion
pt2_07767	C	C1S	Potri.003G019000	Potri.003G019000(CS)	sp|Q0WVV0|PPR31_ARATH	Pentatricopeptide repeat-containing protein At1g10910, chloroplastic OS=Arabidopsis thaliana GN=At1g10910 PE=2 SV=1	AT1G10910.1	| Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:3639908-3643974 FORWARD LENGTH=664	LOC_Os01g37870.1	protein|PPR repeat domain containing protein, putative, expressed	IMGA|Medtr5g008300.1	Pentatricopeptide repeat-containing protein chr5 1493031-1498664 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0008150|biological_process	NA	GO:0005739|mitochondrion
pt2_07768	C	C1S	Potri.003G019000	Potri.003G019000(CS)	sp|Q0WVV0|PPR31_ARATH	Pentatricopeptide repeat-containing protein At1g10910, chloroplastic OS=Arabidopsis thaliana GN=At1g10910 PE=2 SV=1	AT1G10910.1	| Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:3639908-3643974 FORWARD LENGTH=664	LOC_Os01g37870.1	protein|PPR repeat domain containing protein, putative, expressed	IMGA|Medtr5g008300.1	Pentatricopeptide repeat-containing protein chr5 1493031-1498664 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0008150|biological_process	NA	GO:0005739|mitochondrion
pt2_07769	A	A1S	Potri.003G019100	Potri.003G019100(AS)	POPTR_0003s01350	sp|Q9SUI2|PI5K7_ARATH	Phosphatidylinositol 4-phosphate 5-kinase 7 OS=Arabidopsis thaliana GN=PIP5K7 PE=1 SV=1	AT1G10900.1	| Symbols: | Phosphatidylinositol-4-phosphate 5-kinase family protein | chr1:3632396-3636416 REVERSE LENGTH=754	LOC_Os03g49510.1	protein|phosphatidylinositol-4-phosphate 5-kinase, putative, expressed	IMGA|contig_103915_1.1	Phosphatidylinositol-4-phosphate 5-kinase contig_103915 377-2402 F PREDN 20111014	GO:0046488|phosphatidylinositol metabolic process	GO:0005524|ATP binding GO:0016307|phosphatidylinositol phosphate kinase activity GO:0016308|1-phosphatidylinositol-4-phosphate 5-kinase activity	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_07770	A	A1S	Potri.003G019300	Potri.003G019300(AS)	POPTR_0003s01360	sp|Q90515|TMEDA_TAKRU	Transmembrane emp24 domain-containing protein 10 OS=Takifugu rubripes GN=tmed10 PE=3 SV=1	AT1G09580.1	| Symbols: | emp24/gp25L/p24 family/GOLD family protein | chr1:3104657-3106092 FORWARD LENGTH=217	LOC_Os06g10760.1	protein|emp24/gp25L/p24 family protein, putative, expressed	IMGA|Medtr5g058140.1	Transmembrane emp24 domain-containing protein chr5 23359695-23355297 F EGN_Mt100125 20111014	GO:0006810|transport GO:0006886|intracellular protein transport	GO:0008320|protein transmembrane transporter activity	GO:0016020|membrane GO:0016021|integral to membrane
pt2_07771	A	A1S	Potri.003G019400	Potri.003G019400(AS)	POPTR_0003s01370	sp|Q9SAC4|FB2_ARATH	F-box protein At1g10780 OS=Arabidopsis thaliana GN=At1g10780 PE=2 SV=1	AT1G10780.1	| Symbols: | F-box/RNI-like superfamily protein | chr1:3592875-3594310 REVERSE LENGTH=418	LOC_Os09g28120.1	protein|OsFBX330 - F-box domain containing protein, expressed	NA	NA	GO:0006270|DNA replication initiation GO:0006275|regulation of DNA replication GO:0008150|biological_process GO:0008283|cell proliferation GO:0010389|regulation of G2/M transition of mitotic cell cycle GO:0016572|histone phosphorylation GO:0051726|regulation of cell cycle	GO:0003674|molecular_function	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_07772	A	A1S	Potri.003G019500	Potri.003G019500(AS)	POPTR_0003s01380	sp|P54493|GLUP_BACSU	Rhomboid protease gluP OS=Bacillus subtilis (strain 168) GN=gluP PE=1 SV=2	AT1G25290.2	| Symbols: RBL10 | RHOMBOID-like protein 10 | chr1:8867157-8868945 FORWARD LENGTH=336	LOC_Os09g28100.1	protein|OsRhmbd15 - Putative Rhomboid homologue, expressed	NA	NA	GO:0006508|proteolysis GO:0008150|biological_process	GO:0004252|serine-type endopeptidase activity	GO:0005886|plasma membrane GO:0031969|chloroplast membrane
pt2_07773	A	A1S	Potri.003G019600	Potri.003G019600(AS)	POPTR_0003s01390	NA	NA	AT5G24690.1	| Symbols: | Protein of unknown function (DUF3411) | chr5:8455783-8458513 REVERSE LENGTH=521	LOC_Os12g18630.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	NA	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009536|plastid GO:0009706|chloroplast inner membrane GO:0009941|chloroplast envelope
pt2_07774	A	A1S	Potri.003G019600	Potri.003G019600(AS)	POPTR_0003s01390	NA	NA	AT5G24690.1	| Symbols: | Protein of unknown function (DUF3411) | chr5:8455783-8458513 REVERSE LENGTH=521	LOC_Os12g18630.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	NA	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009536|plastid GO:0009706|chloroplast inner membrane GO:0009941|chloroplast envelope
pt2_07775	A	A1S	Potri.003G019700	Potri.003G019700(AS)	POPTR_0003s01400	sp|Q86JM5|Y2012_DICDI	Putative elongation of fatty acids protein DDB_G0272012 OS=Dictyostelium discoideum GN=DDB_G0272012 PE=3 SV=1	AT3G06470.1	| Symbols: | GNS1/SUR4 membrane protein family | chr3:1984206-1985042 FORWARD LENGTH=278	LOC_Os03g49480.1	protein|elongation of fatty acids protein 2, putative, expressed	IMGA|Medtr5g019330.1	hypothetical protein chr5 7039389-7040297 H EGN_Mt100125 20111014	GO:0008150|biological_process GO:0016126|sterol biosynthetic process GO:0046520|sphingoid biosynthetic process	GO:0003674|molecular_function	GO:0016021|integral to membrane
pt2_07776	A	A1S	Potri.003G019800	Potri.003G019800(AS)	POPTR_0003s01410	sp|Q86JM5|Y2012_DICDI	Putative elongation of fatty acids protein DDB_G0272012 OS=Dictyostelium discoideum GN=DDB_G0272012 PE=3 SV=1	AT3G06470.1	| Symbols: | GNS1/SUR4 membrane protein family | chr3:1984206-1985042 FORWARD LENGTH=278	LOC_Os03g49480.1	protein|elongation of fatty acids protein 2, putative, expressed	IMGA|Medtr5g019330.1	hypothetical protein chr5 7039389-7040297 H EGN_Mt100125 20111014	GO:0008150|biological_process GO:0016126|sterol biosynthetic process GO:0046520|sphingoid biosynthetic process	GO:0003674|molecular_function	GO:0016021|integral to membrane
pt2_07777	A	A1S	Potri.003G019900	Potri.003G019900(AS)	POPTR_0003s01420	sp|Q8GT20|BEBT_TOBAC	Benzyl alcohol O-benzoyltransferase OS=Nicotiana tabacum GN=HSR201 PE=1 SV=1	AT5G17540.1	| Symbols: | HXXXD-type acyl-transferase family protein | chr5:5782061-5783682 REVERSE LENGTH=461	LOC_Os10g35950.1	protein|transferase family protein, putative, expressed	IMGA|Medtr5g076700.1	Benzoyl coenzyme A benzyl alcohol benzoyl transferase chr5 31729976-31732699 H EGN_Mt100125 20111014	NA	GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_07778	A	A1S	Potri.003G020100	Potri.003G020100(AS)	POPTR_0003s01430	sp|P28493|PR5_ARATH	Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1	AT1G77700.1	| Symbols: | Pathogenesis-related thaumatin superfamily protein | chr1:29204747-29206217 FORWARD LENGTH=356	LOC_Os04g59370.1	protein|thaumatin, putative, expressed	IMGA|Medtr5g059200.1	Pathogenesis-related protein chr5 23780576-23781889 E EGN_Mt100125 20111014	GO:0051707|response to other organism	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005576|extracellular region
pt2_07779	A	A1S	Potri.003G020200	Potri.003G020200(AS)	POPTR_0003s01440	sp|Q8VYI9|NLTL5_ARATH	Non-specific lipid-transfer protein-like protein At5g64080 OS=Arabidopsis thaliana GN=At5g64080 PE=1 SV=1	AT5G64080.2	| Symbols: | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr5:25645475-25646638 REVERSE LENGTH=178	LOC_Os03g09230.2	protein|LTPL69 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	IMGA|Medtr5g070360.1	Non-specific lipid-transfer protein chr5 28816605-28814460 F EGN_Mt100125 20111014	GO:0006869|lipid transport	GO:0008289|lipid binding	GO:0005886|plasma membrane GO:0031225|anchored to membrane GO:0046658|anchored to plasma membrane
pt2_07780	A	A1S	Potri.003G020400	Potri.003G020400(AS)	POPTR_0003s01450	sp|P27524|CB4A_SOLLC	Chlorophyll a-b binding protein CP24 10A, chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3 SV=1	AT1G15820.1	| Symbols: LHCB6, CP24 | light harvesting complex photosystem II subunit 6 | chr1:5446685-5447676 REVERSE LENGTH=258	LOC_Os04g38410.1	protein|chlorophyll A-B binding protein, putative, expressed	IMGA|Medtr5g098780.2	Chlorophyll a-b binding protein chr5 42222305-42216869 F EGN_Mt100125 20111014	GO:0006816|calcium ion transport GO:0007030|Golgi organization GO:0009651|response to salt stress GO:0009765|photosynthesis, light harvesting GO:0010196|nonphotochemical quenching GO:0015979|photosynthesis GO:0019344|cysteine biosynthetic process GO:0019684|photosynthesis, light reaction GO:0035304|regulation of protein dephosphorylation	GO:0016168|chlorophyll binding	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009579|thylakoid GO:0009783|photosystem II antenna complex GO:0009941|chloroplast envelope GO:0010287|plastoglobule GO:0016020|membrane
pt2_07781	A	A1S	Potri.003G020400	Potri.003G020400(AS)	POPTR_0003s01450	sp|P27524|CB4A_SOLLC	Chlorophyll a-b binding protein CP24 10A, chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3 SV=1	AT1G15820.1	| Symbols: LHCB6, CP24 | light harvesting complex photosystem II subunit 6 | chr1:5446685-5447676 REVERSE LENGTH=258	LOC_Os04g38410.1	protein|chlorophyll A-B binding protein, putative, expressed	IMGA|Medtr5g098780.2	Chlorophyll a-b binding protein chr5 42222305-42216869 F EGN_Mt100125 20111014	GO:0006816|calcium ion transport GO:0007030|Golgi organization GO:0009651|response to salt stress GO:0009765|photosynthesis, light harvesting GO:0010196|nonphotochemical quenching GO:0015979|photosynthesis GO:0019344|cysteine biosynthetic process GO:0019684|photosynthesis, light reaction GO:0035304|regulation of protein dephosphorylation	GO:0016168|chlorophyll binding	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009579|thylakoid GO:0009783|photosystem II antenna complex GO:0009941|chloroplast envelope GO:0010287|plastoglobule GO:0016020|membrane
pt2_07782	A	A2S	Potri.003G020400	Potri.003G020400(AS) Potri.001G210000(DS)	POPTR_0003s01450	sp|P27524|CB4A_SOLLC	Chlorophyll a-b binding protein CP24 10A, chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3 SV=1	AT1G15820.1	| Symbols: LHCB6, CP24 | light harvesting complex photosystem II subunit 6 | chr1:5446685-5447676 REVERSE LENGTH=258	LOC_Os04g38410.1	protein|chlorophyll A-B binding protein, putative, expressed	IMGA|Medtr5g098780.2	Chlorophyll a-b binding protein chr5 42222305-42216869 F EGN_Mt100125 20111014	GO:0006816|calcium ion transport GO:0007030|Golgi organization GO:0009651|response to salt stress GO:0009765|photosynthesis, light harvesting GO:0010196|nonphotochemical quenching GO:0015979|photosynthesis GO:0019344|cysteine biosynthetic process GO:0019684|photosynthesis, light reaction GO:0035304|regulation of protein dephosphorylation	GO:0016168|chlorophyll binding	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009579|thylakoid GO:0009783|photosystem II antenna complex GO:0009941|chloroplast envelope GO:0010287|plastoglobule GO:0016020|membrane
pt2_07783	A	A2S	Potri.003G020300	Potri.003G020300(AS) Potri.001G209900(DS)	POPTR_0003s01470	sp|Q8DI01|FABZ_THEEB	(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Thermosynechococcus elongatus (strain BP-1) GN=fabZ PE=3 SV=1	AT5G10160.1	| Symbols: | Thioesterase superfamily protein | chr5:3185819-3187159 FORWARD LENGTH=219	LOC_Os05g36000.1	protein|FabA-like domain containing protein, expressed	NA	NA	GO:0006633|fatty acid biosynthetic process GO:0006744|ubiquinone biosynthetic process	GO:0016836|hydro-lyase activity GO:0019171|3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity	GO:0005618|cell wall GO:0005737|cytoplasm GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009941|chloroplast envelope GO:0016020|membrane
pt2_07784	B	B1S	Potri.003G020500	Potri.003G020500(BS)	POPTR_0003s01480	NA	NA	AT5G64090.1	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Hyccin (InterPro:IPR018619); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G21050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:25648069-25649415 FORWARD LENGTH=448	LOC_Os11g06860.1	protein|expressed protein	IMGA|Medtr5g087660.1	Hyccin chr5 36994661-36993603 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_07785	A	A1S	Potri.003G020600	Potri.003G020600(AS)	POPTR_0003s01490	sp|C0LGR9|Y4312_ARATH	Probable LRR receptor-like serine/threonine-protein kinase At4g31250 OS=Arabidopsis thaliana GN=At4g31250 PE=2 SV=1	AT4G31250.1	| Symbols: | Leucine-rich repeat protein kinase family protein | chr4:15179201-15181751 REVERSE LENGTH=676	LOC_Os01g12390.1	protein|inactive receptor kinase At2g26730 precursor, putative, expressed	IMGA|contig_61374_1.1	Receptor-like protein kinase 1-like protein contig_61374 772-3151 H PREDN 20111014	GO:0000272|polysaccharide catabolic process GO:0005982|starch metabolic process GO:0006084|acetyl-CoA metabolic process GO:0006468|protein phosphorylation GO:0007020|microtubule nucleation GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway GO:0007389|pattern specification process GO:0008361|regulation of cell size GO:0009664|plant-type cell wall organization GO:0009926|auxin polar transport GO:0010015|root morphogenesis GO:0010075|regulation of meristem growth GO:0016126|sterol biosynthetic process GO:0016132|brassinosteroid biosynthetic process GO:0040007|growth	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_07786	A	A1S	Potri.003G020700	Potri.003G020700(AS)	POPTR_0003s01500	sp|Q9LU85|PAP4_ARATH	Probable plastid-lipid-associated protein 4, chloroplastic OS=Arabidopsis thaliana GN=PAP4 PE=1 SV=1	AT3G26070.1	| Symbols: | Plastid-lipid associated protein PAP / fibrillin family protein | chr3:9526904-9528199 FORWARD LENGTH=242	LOC_Os03g49720.1	protein|PAP fibrillin family domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0005198|structural molecule activity	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0010287|plastoglobule
pt2_07787	A	A2S	Potri.003G020800	Potri.003G020800(AS) Potri.001G209500(BS)	POPTR_0003s01510	sp|Q8BJ56|PLPL2_MOUSE	Patatin-like phospholipase domain-containing protein 2 OS=Mus musculus GN=Pnpla2 PE=1 SV=1	AT1G33270.1	| Symbols: | Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein | chr1:12068324-12070157 REVERSE LENGTH=369	LOC_Os11g34370.1	protein|phospholipase, patatin family, putative, expressed	NA	NA	GO:0006629|lipid metabolic process	NA	GO:0005886|plasma membrane
pt2_07788	G	G3	NA	NA	POPTR_0003s01520	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07789	C	C1S	Potri.003G020900	Potri.003G020900(CS)	sp|O80690|BGL46_ARATH	Beta-glucosidase 46 OS=Arabidopsis thaliana GN=BGLU46 PE=1 SV=2	AT1G61820.3	| Symbols: BGLU46 | beta glucosidase 46 | chr1:22836707-22838444 FORWARD LENGTH=377	NA	NA	NA	NA	GO:0005975|carbohydrate metabolic process GO:0009809|lignin biosynthetic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0008422|beta-glucosidase activity GO:0043169|cation binding GO:0047782|coniferin beta-glucosidase activity	GO:0005576|extracellular region
pt2_07790	A	A1S	Potri.003G021000	Potri.003G021000(AS)	POPTR_0003s01530	sp|Q9LDX1|SGS3_ARATH	Protein SUPPRESSOR OF GENE SILENCING 3 OS=Arabidopsis thaliana GN=SGS3 PE=1 SV=1	AT5G23570.1	| Symbols: SGS3, ATSGS3 | XS domain-containing protein / XS zinc finger domain-containing protein-related | chr5:7943621-7945874 FORWARD LENGTH=625	LOC_Os12g09580.1	protein|leafbladeless1, putative, expressed	NA	NA	GO:0009616|virus induced gene silencing GO:0010025|wax biosynthetic process GO:0010050|vegetative phase change GO:0010267|production of ta-siRNAs involved in RNA interference GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0051607|defense response to virus	NA	GO:0005737|cytoplasm GO:0005783|endoplasmic reticulum GO:0005829|cytosol
pt2_07791	A	A1S	Potri.003G021100	Potri.003G021100(AS)	POPTR_0003s01540	sp|Q9Y751|ATG26_PICPG	Sterol 3-beta-glucosyltransferase OS=Pichia pastoris (strain GS115 / ATCC 20864) GN=ATG26 PE=3 SV=1	AT5G24750.1	| Symbols: | UDP-Glycosyltransferase superfamily protein | chr5:8490821-8494536 REVERSE LENGTH=520	LOC_Os02g11940.1	protein|sterol glucosyltransferase, putative, expressed	IMGA|Medtr1g098640.3	Sterol 3-beta-glucosyltransferase chr1 28356059-28363721 E EGN_Mt100125 20111014	GO:0008152|metabolic process	GO:0016758|transferase activity, transferring hexosyl groups	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_07792	A	A1S	Potri.003G021300	Potri.003G021300(AS)	POPTR_0003s01550	sp|Q9SMY6|PME45_ARATH	Putative pectinesterase/pectinesterase inhibitor 45 OS=Arabidopsis thaliana GN=PME45 PE=2 SV=1	AT4G33230.1	| Symbols: | Plant invertase/pectin methylesterase inhibitor superfamily | chr4:16026591-16028754 REVERSE LENGTH=609	LOC_Os04g38560.1	protein|pectinesterase, putative, expressed	IMGA|Medtr1g083490.1	Pectinesterase chr1 21669361-21667322 E EGN_Mt100125 20111014	GO:0009860|pollen tube growth GO:0042545|cell wall modification	GO:0004857|enzyme inhibitor activity GO:0030599|pectinesterase activity	GO:0005618|cell wall GO:0009505|plant-type cell wall
pt2_07793	A	A5S	Potri.003G021400	Potri.003G021400(AS) Potri.003G040700(DS) Potri.003G036500(DS) Potri.003G036200(DS) Potri.003G040400(DS)	POPTR_0003s01560	sp|P28656|NP1L1_MOUSE	Nucleosome assembly protein 1-like 1 OS=Mus musculus GN=Nap1l1 PE=1 SV=2	AT2G19480.3	| Symbols: NAP1;2 | nucleosome assembly protein 1;2 | chr2:8438601-8441040 FORWARD LENGTH=372	LOC_Os05g46230.1	protein|NAP domain containing protein, putative, expressed	NA	NA	GO:0006281|DNA repair GO:0006334|nucleosome assembly GO:0046686|response to cadmium ion	GO:0003677|DNA binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane
pt2_07794	C	C1S	Potri.003G021500	Potri.003G021500(CS)	NA	NA	AT1G11400.3	| Symbols: PYM | partner of Y14-MAGO | chr1:3838777-3839978 FORWARD LENGTH=204	LOC_Os03g15560.1	protein|wibg, putative, expressed	NA	NA	GO:0006396|RNA processing GO:0010628|positive regulation of gene expression	GO:0005515|protein binding	GO:0005634|nucleus GO:0005654|nucleoplasm GO:0005730|nucleolus GO:0005737|cytoplasm
pt2_07795	A	A2S	Potri.003G021600	Potri.003G021600(AS) Potri.001G209000(DS)	POPTR_0003s01580	sp|Q9SMY6|PME45_ARATH	Putative pectinesterase/pectinesterase inhibitor 45 OS=Arabidopsis thaliana GN=PME45 PE=2 SV=1	AT4G33230.1	| Symbols: | Plant invertase/pectin methylesterase inhibitor superfamily | chr4:16026591-16028754 REVERSE LENGTH=609	LOC_Os04g38560.1	protein|pectinesterase, putative, expressed	IMGA|Medtr1g083490.1	Pectinesterase chr1 21669361-21667322 E EGN_Mt100125 20111014	GO:0042545|cell wall modification	GO:0004857|enzyme inhibitor activity GO:0030599|pectinesterase activity	GO:0005618|cell wall GO:0005634|nucleus GO:0009505|plant-type cell wall
pt2_07796	A	A1S	Potri.003G021700	Potri.003G021700(AS)	POPTR_0003s01610	sp|P33144|BIMB_EMENI	Separin OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=bimB PE=3 SV=2	AT4G22970.1	| Symbols: RSW4, AESP, ESP | homolog of separase | chr4:12033703-12043572 REVERSE LENGTH=2180	LOC_Os02g53120.1	protein|Peptidase family C50, putative, expressed	IMGA|Medtr5g073170.1	hypothetical protein chr5 30134153-30137935 H EGN_Mt100125 20111014	GO:0000003|reproduction GO:0000280|nuclear division GO:0006259|DNA metabolic process GO:0006275|regulation of DNA replication GO:0006302|double-strand break repair GO:0006310|DNA recombination GO:0006312|mitotic recombination GO:0006325|chromatin organization GO:0006342|chromatin silencing GO:0006396|RNA processing GO:0006508|proteolysis GO:0007062|sister chromatid cohesion GO:0007067|mitosis GO:0007126|meiosis GO:0007129|synapsis GO:0007131|reciprocal meiotic recombination GO:0008284|positive regulation of cell proliferation GO:0009640|photomorphogenesis GO:0009793|embryo development ending in seed dormancy GO:0009826|unidimensional cell growth GO:0009845|seed germination GO:0009880|embryonic pattern specification GO:0009887|organ morphogenesis GO:0009888|tissue development GO:0009909|regulation of flower development GO:0009933|meristem structural organization GO:0009960|endosperm development GO:0010072|primary shoot apical meristem specification GO:0010090|trichome morphogenesis GO:0010162|seed dormancy process GO:0010182|sugar mediated signaling pathway GO:0010228|vegetative to reproductive phase transition of meristem GO:0010332|response to gamma radiation GO:0010389|regulation of G2/M transition of mitotic cell cycle GO:0010431|seed maturation GO:0010564|regulation of cell cycle process GO:0010638|positive regulation of organelle organization GO:0016567|protein ubiquitination GO:0016572|histone phosphorylation GO:0019915|lipid storage GO:0031048|chromatin silencing by small RNA GO:0032204|regulation of telomere maintenance GO:0032504|multicellular organism reproduction GO:0033044|regulation of chromosome organization GO:0042023|DNA endoreduplication GO:0042138|meiotic DNA double-strand break formation GO:0043247|telomere maintenance in response to DNA damage GO:0045132|meiotic chromosome segregation GO:0045595|regulation of cell differentiation GO:0045876|positive regulation of sister chromatid cohesion GO:0045893|positive regulation of transcription, DNA-dependent GO:0048366|leaf development GO:0048825|cotyledon development GO:0050826|response to freezing GO:0051225|spindle assembly GO:0051276|chromosome organization GO:0051307|meiotic chromosome separation GO:0051567|histone H3-K9 methylation	GO:0008233|peptidase activity	GO:0005634|nucleus
pt2_07797	A	A1S	Potri.003G021800	Potri.003G021800(AS)	POPTR_0003s01620	NA	NA	AT1G68140.3	| Symbols: | Protein of unknown function (DUF1644) | chr1:25539410-25540414 REVERSE LENGTH=334	LOC_Os02g53110.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_07798	A	A2S	Potri.003G021900	Potri.003G021900(AS) Potri.001G208200(BS)	POPTR_0003s01630	NA	NA	AT1G15200.1	| Symbols: | protein-protein interaction regulator family protein | chr1:5228477-5231017 REVERSE LENGTH=423	LOC_Os03g49520.1	protein|pinin/SDK/memA protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07799	A	A1S	Potri.T165600	Potri.T165600(AS)	POPTR_0003s01640	NA	NA	AT2G01080.1	| Symbols: | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | chr2:78038-79176 FORWARD LENGTH=231	LOC_Os03g15630.1	protein|harpin-induced protein 1 domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005886|plasma membrane
pt2_07800	A	A1S	Potri.003G022000	Potri.003G022000(AS)	POPTR_0003s01650	sp|P43255|CSN8_ARATH	COP9 signalosome complex subunit 8 OS=Arabidopsis thaliana GN=CSN8 PE=1 SV=1	AT4G14110.1	| Symbols: COP9, CSN8, FUS7, EMB143 | COP9 signalosome, subunit CSN8 | chr4:8133049-8134867 REVERSE LENGTH=197	LOC_Os04g34930.1	protein|COP9 signalosome complex subunit 8, putative, expressed	NA	NA	GO:0000338|protein deneddylation GO:0006626|protein targeting to mitochondrion GO:0009416|response to light stimulus GO:0009640|photomorphogenesis GO:0009753|response to jasmonic acid stimulus GO:0010387|signalosome assembly GO:0010388|cullin deneddylation	GO:0004222|metalloendopeptidase activity GO:0005515|protein binding	GO:0005634|nucleus GO:0008180|signalosome
pt2_07801	A	A2S	Potri.003G022200	Potri.003G022200(AS) Potri.003G022100(AS)	POPTR_0003s01660	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07802	A	A1S	Potri.003G022100	Potri.003G022100(AS)	POPTR_0003s01670	sp|Q6FK48|SWR1_CANGA	Helicase SWR1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SWR1 PE=3 SV=1	AT3G12810.1	| Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containing protein / helicase domain-containing protein | chr3:4065636-4073992 FORWARD LENGTH=2055	LOC_Os02g46450.1	protein|helicase conserved C-terminal domain containing protein, expressed	IMGA|Medtr5g005840.1	Chromatin remodeling complex subunit chr5 407817-415760 E EGN_Mt100125 20111014	GO:0003002|regionalization GO:0006338|chromatin remodeling GO:0007155|cell adhesion GO:0009793|embryo development ending in seed dormancy GO:0009909|regulation of flower development GO:0009910|negative regulation of flower development GO:0010090|trichome morphogenesis GO:0010228|vegetative to reproductive phase transition of meristem GO:0033043|regulation of organelle organization GO:0042742|defense response to bacterium GO:0045010|actin nucleation GO:0046686|response to cadmium ion GO:0048441|petal development GO:0048449|floral organ formation GO:0048451|petal formation GO:0048453|sepal formation GO:0048765|root hair cell differentiation GO:0071555|cell wall organization	GO:0003676|nucleic acid binding GO:0003677|DNA binding GO:0004386|helicase activity GO:0005515|protein binding GO:0005524|ATP binding	GO:0005618|cell wall GO:0005634|nucleus GO:0016514|SWI/SNF complex GO:0016585|chromatin remodeling complex
pt2_07803	A	A1S	Potri.003G022400	Potri.003G022400(AS)	POPTR_0003s01680	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07804	A	A1S	Potri.003G022600	Potri.003G022600(AS)	POPTR_0003s01700	sp|Q9SPU7|TERT_ARATH	Telomerase reverse transcriptase OS=Arabidopsis thaliana GN=TERT PE=1 SV=1	AT5G16850.1	| Symbols: ATTERT, TERT | telomerase reverse transcriptase | chr5:5538323-5543444 REVERSE LENGTH=1123	LOC_Os12g19549.1	protein|telomerase reverse transcriptase, putative, expressed	NA	NA	GO:0000723|telomere maintenance GO:0006278|RNA-dependent DNA replication GO:0007000|nucleolus organization GO:0007004|telomere maintenance via telomerase GO:0050000|chromosome localization GO:0051276|chromosome organization	GO:0003677|DNA binding GO:0003720|telomerase activity GO:0003721|telomeric template RNA reverse transcriptase activity GO:0003723|RNA binding GO:0003964|RNA-directed DNA polymerase activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_07805	C	C1S	Potri.003G022700	Potri.003G022700(CS)	sp|Q6YJI5|TRM11_CHICK	tRNA (guanine(10)-N2)-methyltransferase homolog OS=Gallus gallus GN=TRMT11 PE=2 SV=1	AT3G26410.1	| Symbols: TRM11, AtTRM11 | methyltransferases;nucleic acid binding | chr3:9669508-9671273 REVERSE LENGTH=477	LOC_Os02g35060.1	protein|RNA methyltransferase protein, putative, expressed	NA	NA	GO:0006400|tRNA modification GO:0006626|protein targeting to mitochondrion GO:0032259|methylation GO:0080180|2-methylguanosine metabolic process	GO:0003676|nucleic acid binding GO:0008168|methyltransferase activity	GO:0005737|cytoplasm
pt2_07806	A	A1S	Potri.003G022800	Potri.003G022800(AS)	POPTR_0003s01720	sp|Q52QH4|NAC68_ORYSJ	NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1	AT5G64530.1	| Symbols: ANAC104, XND1 | xylem NAC domain 1 | chr5:25795360-25796699 FORWARD LENGTH=187	LOC_Os04g35660.1	protein|no apical meristem protein, putative, expressed	IMGA|Medtr5g041940.1	NAC domain protein chr5 18013715-18012368 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0007275|multicellular organismal development GO:0010089|xylem development GO:0043067|regulation of programmed cell death GO:0048367|shoot development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07807	A	A1S	Potri.003G022900	Potri.003G022900(AS)	POPTR_0003s01730	sp|Q9FLG1|BXL4_ARATH	Beta-D-xylosidase 4 OS=Arabidopsis thaliana GN=BXL4 PE=1 SV=1	AT5G64570.1	| Symbols: XYL4, ATBXL4 | beta-D-xylosidase 4 | chr5:25810227-25813309 REVERSE LENGTH=784	LOC_Os04g54810.1	protein|beta-D-xylosidase, putative, expressed	IMGA|Medtr5g062430.1	Xylan 1 4-beta-xylosidase chr5 25153086-25159051 E EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0045493|xylan catabolic process	GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0009044|xylan 1,4-beta-xylosidase activity	GO:0005576|extracellular region GO:0005618|cell wall GO:0048046|apoplast
pt2_07808	A	A1S	Potri.003G023200	Potri.003G023200(AS)	POPTR_0003s01740	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07809	A	A1S	Potri.003G023300	Potri.003G023300(AS)	POPTR_0003s01750	sp|Q9SZ67|WRK19_ARATH	Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1	AT5G64550.1	| Symbols: | loricrin-related | chr5:25801794-25803698 REVERSE LENGTH=634	LOC_Os04g54830.1	protein|expressed protein	IMGA|contig_83807_1.1	Unknown protein contig_83807 2620-1 E PREDN 20111014	NA	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_07810	A	A1S	Potri.003G023400	Potri.003G023400(AS)	POPTR_0003s01760	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07811	C	C2S	Potri.T125400	Potri.T125400(CS) Potri.003G023500(CS)	sp|Q9CQE7|ERGI3_MOUSE	Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Mus musculus GN=Ergic3 PE=2 SV=1	AT1G36050.2	| Symbols: | Endoplasmic reticulum vesicle transporter protein | chr1:13450467-13453055 FORWARD LENGTH=386	LOC_Os04g38340.1	protein|endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed	IMGA|Medtr5g062720.1	Endoplasmic reticulum-Golgi intermediate compartment protein chr5 25295217-25286148 F EGN_Mt100125 20111014	GO:0006633|fatty acid biosynthetic process	GO:0003674|molecular_function	GO:0005774|vacuolar membrane GO:0005783|endoplasmic reticulum GO:0005794|Golgi apparatus
pt2_07812	C	C2S	Potri.003G023500	Potri.003G023500(CS) Potri.T125400(CS)	sp|Q803I2|ERGI3_DANRE	Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Danio rerio GN=ergic3 PE=2 SV=1	AT1G36050.2	| Symbols: | Endoplasmic reticulum vesicle transporter protein | chr1:13450467-13453055 FORWARD LENGTH=386	LOC_Os04g38340.1	protein|endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed	IMGA|Medtr5g062720.1	Endoplasmic reticulum-Golgi intermediate compartment protein chr5 25295217-25286148 F EGN_Mt100125 20111014	GO:0006633|fatty acid biosynthetic process	GO:0003674|molecular_function	GO:0005774|vacuolar membrane GO:0005783|endoplasmic reticulum GO:0005794|Golgi apparatus
pt2_07813	A	A2S	Potri.T125500	Potri.T125500(AS) Potri.003G023600(AS)	POPTR_0003s01790	NA	NA	AT5G64160.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:25670941-25672318 FORWARD LENGTH=227	LOC_Os02g51700.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_07814	B	B1S	Potri.T125500	Potri.T125500(BS)	POPTR_0003s01790	NA	NA	AT5G64160.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:25670941-25672318 FORWARD LENGTH=227	LOC_Os02g51700.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_07815	A	A2S	Potri.T125500	Potri.T125500(AS) Potri.003G023600(AS)	POPTR_0003s01790	NA	NA	AT5G64160.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:25670941-25672318 FORWARD LENGTH=227	LOC_Os02g51700.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_07816	A	A2S	Potri.T125600	Potri.T125600(AS) Potri.003G023700(DS)	POPTR_0003s01800	sp|Q9CWK3|CD2B2_MOUSE	CD2 antigen cytoplasmic tail-binding protein 2 OS=Mus musculus GN=Cd2bp2 PE=1 SV=1	AT5G09390.1	| Symbols: | CD2-binding protein-related | chr5:2913591-2915803 FORWARD LENGTH=351	LOC_Os09g20590.1	protein|CD2-binding protein-related, putative, expressed	IMGA|Medtr5g017190.1	CD2 antigen cytoplasmic tail-binding protein chr5 5989892-5990735 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005737|cytoplasm
pt2_07817	A	A2S	Potri.003G023800	Potri.003G023800(AS) Potri.T125700(AS)	POPTR_0003s01810	sp|P30352|SRSF2_CHICK	Serine/arginine-rich splicing factor 2 OS=Gallus gallus GN=SRSF2 PE=2 SV=1	AT5G64200.2	| Symbols: ATSC35, SC35, At-SC35 | ortholog of human splicing factor SC35 | chr5:25681849-25683553 REVERSE LENGTH=303	LOC_Os07g43050.1	protein|RNA recognition motif containing protein, expressed	IMGA|Medtr5g070450.2	"Splicing factor, arginine/serine-rich" chr5 28858307-28855600 F EGN_Mt100125 20111014	GO:0000398|mRNA splicing, via spliceosome GO:0008380|RNA splicing GO:0030422|production of siRNA involved in RNA interference GO:0035196|production of miRNAs involved in gene silencing by miRNA	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005634|nucleus GO:0005829|cytosol GO:0016020|membrane GO:0016607|nuclear speck
pt2_07818	A	A2S	Potri.003G023800	Potri.003G023800(AS) Potri.T125700(AS)	POPTR_0003s01810	sp|P30352|SRSF2_CHICK	Serine/arginine-rich splicing factor 2 OS=Gallus gallus GN=SRSF2 PE=2 SV=1	AT5G64200.2	| Symbols: ATSC35, SC35, At-SC35 | ortholog of human splicing factor SC35 | chr5:25681849-25683553 REVERSE LENGTH=303	LOC_Os07g43050.1	protein|RNA recognition motif containing protein, expressed	IMGA|Medtr5g070450.2	"Splicing factor, arginine/serine-rich" chr5 28858307-28855600 F EGN_Mt100125 20111014	GO:0000398|mRNA splicing, via spliceosome GO:0008380|RNA splicing GO:0030422|production of siRNA involved in RNA interference GO:0035196|production of miRNAs involved in gene silencing by miRNA	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005634|nucleus GO:0005829|cytosol GO:0016020|membrane GO:0016607|nuclear speck
pt2_07819	A	A1S	Potri.003G023900	Potri.003G023900(AS)	POPTR_0003s01820	sp|Q9FY75|POT7_ARATH	Potassium transporter 7 OS=Arabidopsis thaliana GN=POT7 PE=1 SV=2	AT5G09400.1	| Symbols: KUP7 | K+ uptake permease 7 | chr5:2916377-2920604 FORWARD LENGTH=858	LOC_Os07g32530.1	protein|potassium transporter, putative, expressed	IMGA|Medtr5g070670.1	Potassium transporter chr5 28933662-28942483 E EGN_Mt100125 20111014	GO:0006813|potassium ion transport GO:0071805|potassium ion transmembrane transport	GO:0015079|potassium ion transmembrane transporter activity	GO:0000325|plant-type vacuole GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005886|plasma membrane GO:0016020|membrane
pt2_07820	B	B1S	Potri.003G024000	Potri.003G024000(BS)	POPTR_0003s01830	sp|Q9SZC9|HMA6_ARATH	Copper-transporting ATPase PAA1, chloroplastic OS=Arabidopsis thaliana GN=PAA1 PE=2 SV=1	AT4G33520.2	| Symbols: PAA1, HMA6 | P-type ATP-ase 1 | chr4:16118993-16125849 FORWARD LENGTH=949	LOC_Os08g37950.1	protein|copper-transporting ATPase PAA1, putative, expressed	IMGA|contig_52028_1.1	Copper transporting ATPase contig_52028 7242-460 E PREDN 20111014	GO:0006754|ATP biosynthetic process GO:0006812|cation transport GO:0008152|metabolic process GO:0009767|photosynthetic electron transport chain GO:0030001|metal ion transport GO:0035434|copper ion transmembrane transport GO:0046034|ATP metabolic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0005375|copper ion transmembrane transporter activity GO:0005524|ATP binding GO:0015662|ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism GO:0043682|copper-transporting ATPase activity GO:0046872|metal ion binding	GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009536|plastid GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope GO:0016020|membrane GO:0016021|integral to membrane
pt2_07821	C	C1S	Potri.003G024000	Potri.003G024000(CS)	sp|Q9SZC9|HMA6_ARATH	Copper-transporting ATPase PAA1, chloroplastic OS=Arabidopsis thaliana GN=PAA1 PE=2 SV=1	AT4G33520.2	| Symbols: PAA1, HMA6 | P-type ATP-ase 1 | chr4:16118993-16125849 FORWARD LENGTH=949	LOC_Os08g37950.1	protein|copper-transporting ATPase PAA1, putative, expressed	IMGA|contig_52028_1.1	Copper transporting ATPase contig_52028 7242-460 E PREDN 20111014	GO:0006754|ATP biosynthetic process GO:0006812|cation transport GO:0008152|metabolic process GO:0009767|photosynthetic electron transport chain GO:0030001|metal ion transport GO:0035434|copper ion transmembrane transport GO:0046034|ATP metabolic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0005375|copper ion transmembrane transporter activity GO:0005524|ATP binding GO:0015662|ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism GO:0043682|copper-transporting ATPase activity GO:0046872|metal ion binding	GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009536|plastid GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope GO:0016020|membrane GO:0016021|integral to membrane
pt2_07822	C	C1S	Potri.003G024000	Potri.003G024000(CS)	sp|Q9SZC9|HMA6_ARATH	Copper-transporting ATPase PAA1, chloroplastic OS=Arabidopsis thaliana GN=PAA1 PE=2 SV=1	AT4G33520.2	| Symbols: PAA1, HMA6 | P-type ATP-ase 1 | chr4:16118993-16125849 FORWARD LENGTH=949	LOC_Os08g37950.1	protein|copper-transporting ATPase PAA1, putative, expressed	IMGA|contig_52028_1.1	Copper transporting ATPase contig_52028 7242-460 E PREDN 20111014	GO:0006754|ATP biosynthetic process GO:0006812|cation transport GO:0008152|metabolic process GO:0009767|photosynthetic electron transport chain GO:0030001|metal ion transport GO:0035434|copper ion transmembrane transport GO:0046034|ATP metabolic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0005375|copper ion transmembrane transporter activity GO:0005524|ATP binding GO:0015662|ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism GO:0043682|copper-transporting ATPase activity GO:0046872|metal ion binding	GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009536|plastid GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope GO:0016020|membrane GO:0016021|integral to membrane
pt2_07823	C	C1S	Potri.003G024000	Potri.003G024000(CS)	sp|Q9SZC9|HMA6_ARATH	Copper-transporting ATPase PAA1, chloroplastic OS=Arabidopsis thaliana GN=PAA1 PE=2 SV=1	AT4G33520.2	| Symbols: PAA1, HMA6 | P-type ATP-ase 1 | chr4:16118993-16125849 FORWARD LENGTH=949	LOC_Os08g37950.1	protein|copper-transporting ATPase PAA1, putative, expressed	IMGA|contig_52028_1.1	Copper transporting ATPase contig_52028 7242-460 E PREDN 20111014	GO:0006754|ATP biosynthetic process GO:0006812|cation transport GO:0008152|metabolic process GO:0009767|photosynthetic electron transport chain GO:0030001|metal ion transport GO:0035434|copper ion transmembrane transport GO:0046034|ATP metabolic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0005375|copper ion transmembrane transporter activity GO:0005524|ATP binding GO:0015662|ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism GO:0043682|copper-transporting ATPase activity GO:0046872|metal ion binding	GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009536|plastid GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope GO:0016020|membrane GO:0016021|integral to membrane
pt2_07824	A	A1S	Potri.003G024100	Potri.003G024100(AS)	POPTR_0003s01870	sp|P0C897|Y3264_ARATH	Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana GN=At3g02645 PE=3 SV=1	AT3G02645.1	| Symbols: | Plant protein of unknown function (DUF247) | chr3:566271-567860 FORWARD LENGTH=529	LOC_Os06g08120.1	protein|plant protein of unknown function domain containing protein, expressed	IMGA|Medtr5g087580.1	hypothetical protein chr5 36953659-36954327 H EGN_Mt100125 20111014	NA	NA	GO:0005886|plasma membrane
pt2_07825	A	A2S	Potri.003G024200	Potri.003G024200(AS) Potri.003G024800(DS)	POPTR_0003s01880	sp|Q9ZP55|DRP4C_ARATH	Dynamin-related protein 4C OS=Arabidopsis thaliana GN=DRP4C PE=2 SV=1	AT1G60500.1	| Symbols: DRP4C | Dynamin related protein 4C | chr1:22291582-22293822 FORWARD LENGTH=669	LOC_Os03g15420.1	protein|dynamin family protein, putative, expressed	IMGA|Medtr5g009150.1	Dynamin-related protein 1A chr5 1886432-1881144 H EGN_Mt100125 20111014	NA	GO:0003924|GTPase activity GO:0005525|GTP binding	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_07826	C	C1S	Potri.003G024700	Potri.003G024700(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07827	C	C1S	Potri.003G024400	Potri.003G024400(CS)	NA	NA	AT2G35040.2	| Symbols: | AICARFT/IMPCHase bienzyme family protein | chr2:14765347-14768023 REVERSE LENGTH=545	LOC_Os08g10570.2	protein|bifunctional purine biosynthesis protein purH, putative, expressed	IMGA|Medtr5g095820.1	Bifunctional purine biosynthesis protein PurH chr5 40853279-40859212 E EGN_Mt100125 20111014	GO:0006164|purine nucleotide biosynthetic process GO:0009220|pyrimidine ribonucleotide biosynthetic process GO:0009409|response to cold	GO:0003937|IMP cyclohydrolase activity GO:0004643|phosphoribosylaminoimidazolecarboxamide formyltransferase activity	GO:0009507|chloroplast GO:0009536|plastid GO:0009570|chloroplast stroma GO:0010319|stromule
pt2_07828	A	A3S	Potri.003G024600	Potri.003G024600(AS) Potri.003G024200(BS) Potri.003G024800(BS)	POPTR_0003s01920	sp|Q9ZP55|DRP4C_ARATH	Dynamin-related protein 4C OS=Arabidopsis thaliana GN=DRP4C PE=2 SV=1	AT1G60500.1	| Symbols: DRP4C | Dynamin related protein 4C | chr1:22291582-22293822 FORWARD LENGTH=669	LOC_Os03g15420.1	protein|dynamin family protein, putative, expressed	IMGA|Medtr5g009150.1	Dynamin-related protein 1A chr5 1886432-1881144 H EGN_Mt100125 20111014	NA	GO:0003924|GTPase activity GO:0005525|GTP binding	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_07829	A	A1S	Potri.003G024700	Potri.003G024700(AS)	POPTR_0003s01930	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07830	A	A3S	Potri.003G024800	Potri.003G024800(AS) Potri.003G024200(BS) Potri.003G024600(BS)	POPTR_0003s01940	sp|Q9ZP55|DRP4C_ARATH	Dynamin-related protein 4C OS=Arabidopsis thaliana GN=DRP4C PE=2 SV=1	AT1G60500.1	| Symbols: DRP4C | Dynamin related protein 4C | chr1:22291582-22293822 FORWARD LENGTH=669	LOC_Os03g15420.1	protein|dynamin family protein, putative, expressed	IMGA|Medtr5g009150.1	Dynamin-related protein 1A chr5 1886432-1881144 H EGN_Mt100125 20111014	NA	GO:0003924|GTPase activity GO:0005525|GTP binding	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_07831	A	A3S	Potri.003G024900	Potri.003G024900(AS) Potri.003G024200(BS) Potri.003G024800(BS)	POPTR_0003s01950	sp|Q9ZP55|DRP4C_ARATH	Dynamin-related protein 4C OS=Arabidopsis thaliana GN=DRP4C PE=2 SV=1	AT1G60500.1	| Symbols: DRP4C | Dynamin related protein 4C | chr1:22291582-22293822 FORWARD LENGTH=669	LOC_Os03g15420.1	protein|dynamin family protein, putative, expressed	IMGA|Medtr5g009150.1	Dynamin-related protein 1A chr5 1886432-1881144 H EGN_Mt100125 20111014	NA	GO:0003924|GTPase activity GO:0005525|GTP binding	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_07832	C	C2S	Potri.003G013300	Potri.003G013300(CS) Potri.003G029100(CS)	sp|F4I171|MD15A_ARATH	Mediator of RNA polymerase II transcription subunit 15a OS=Arabidopsis thaliana GN=MED15A PE=1 SV=1	AT1G15780.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI BLink). | chr1:5430446-5435921 REVERSE LENGTH=1335	NA	NA	NA	NA	GO:0001676|long-chain fatty acid metabolic process GO:0002213|defense response to insect GO:0006633|fatty acid biosynthetic process GO:0009751|response to salicylic acid stimulus	NA	GO:0005634|nucleus
pt2_07833	A	A4S	Potri.003G025100	Potri.003G025100(AS) Potri.003G029200(BS) Potri.003G029400(DS) Potri.003G028700(DS)	POPTR_0003s01970	sp|Q9FIZ3|GSO2_ARATH	LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana GN=GSO2 PE=2 SV=2	AT1G07390.2	| Symbols: AtRLP1, RLP1 | receptor like protein 1 | chr1:2270633-2274654 FORWARD LENGTH=913	LOC_Os04g55420.1	protein|leucine-rich repeat family protein, putative, expressed	IMGA|Medtr5g087320.1	Receptor-like protein kinase chr5 36814074-36811012 H EGN_Mt100125 20111014	GO:0006457|protein folding GO:0006857|oligopeptide transport GO:0007165|signal transduction GO:0009408|response to heat GO:0009644|response to high light intensity GO:0034976|response to endoplasmic reticulum stress GO:0042542|response to hydrogen peroxide	NA	GO:0005575|cellular_component
pt2_07834	D	D4S	Potri.003G027400	Potri.003G027400(DS) Potri.003G012600(DS) Potri.003G029600(DS) Potri.003G012400(DS)	POPTR_0003s01980	sp|F4I171|MD15A_ARATH	Mediator of RNA polymerase II transcription subunit 15a OS=Arabidopsis thaliana GN=MED15A PE=1 SV=1	AT1G15780.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI BLink). | chr1:5430446-5435921 REVERSE LENGTH=1335	LOC_Os08g41210.3	protein|expressed protein	NA	NA	GO:0001676|long-chain fatty acid metabolic process GO:0002213|defense response to insect GO:0006633|fatty acid biosynthetic process GO:0009751|response to salicylic acid stimulus	NA	GO:0005634|nucleus
pt2_07835	A	A7S	Potri.003G027400	Potri.003G027400(AS) Potri.003G025500(AS) Potri.003G014000(AS) Potri.003G029600(BS) Potri.T041500(BS) Potri.003G012400(BS) Potri.003G028000(BS)	POPTR_0003s02000	sp|F4I171|MD15A_ARATH	Mediator of RNA polymerase II transcription subunit 15a OS=Arabidopsis thaliana GN=MED15A PE=1 SV=1	AT1G15780.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI BLink). | chr1:5430446-5435921 REVERSE LENGTH=1335	LOC_Os08g41210.3	protein|expressed protein	NA	NA	GO:0001676|long-chain fatty acid metabolic process GO:0002213|defense response to insect GO:0006633|fatty acid biosynthetic process GO:0009751|response to salicylic acid stimulus	NA	GO:0005634|nucleus
pt2_07836	C	C1S	Potri.T040600	Potri.T040600(CS)	sp|Q7XA42|RGA1_SOLBU	Putative disease resistance protein RGA1 OS=Solanum bulbocastanum GN=RGA1 PE=2 SV=2	AT3G14470.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr3:4857940-4861104 FORWARD LENGTH=1054	LOC_Os05g41310.1	protein|disease resistance protein RGA2, putative, expressed	IMGA|Medtr5g070490.1	NBS-LRR resistance protein chr5 28886021-28881429 H EGN_Mt100125 20111014	GO:0006952|defense response GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process	GO:0005515|protein binding GO:0043531|ADP binding	GO:0005576|extracellular region
pt2_07837	R	R	NA	NA	POPTR_0003s02020	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07838	A	A5S	Potri.T040800	Potri.T040800(AS) Potri.T041300(BS) Potri.003G029400(BS) Potri.003G012800(BS) Potri.003G027600(DS)	POPTR_0003s02030	sp|Q9FL28|FLS2_ARATH	LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana GN=FLS2 PE=1 SV=1	AT1G07390.1	| Symbols: AtRLP1, RLP1 | receptor like protein 1 | chr1:2269893-2274654 FORWARD LENGTH=1034	LOC_Os04g55440.1	protein|Cf-4A protein, putative, expressed	IMGA|Medtr5g069580.1	Receptor protein kinase-like protein chr5 28520745-28517219 H EGN_Mt100125 20111014	GO:0006457|protein folding GO:0006857|oligopeptide transport GO:0007165|signal transduction GO:0009408|response to heat GO:0009644|response to high light intensity GO:0034976|response to endoplasmic reticulum stress GO:0042542|response to hydrogen peroxide	NA	GO:0005575|cellular_component GO:0005576|extracellular region
pt2_07839	A	A1S	Potri.T040900	Potri.T040900(AS)	POPTR_0003s02040	sp|F4I171|MD15A_ARATH	Mediator of RNA polymerase II transcription subunit 15a OS=Arabidopsis thaliana GN=MED15A PE=1 SV=1	AT1G15780.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI BLink). | chr1:5430446-5435921 REVERSE LENGTH=1335	LOC_Os08g41210.3	protein|expressed protein	NA	NA	GO:0001676|long-chain fatty acid metabolic process GO:0002213|defense response to insect GO:0006633|fatty acid biosynthetic process GO:0009751|response to salicylic acid stimulus	NA	GO:0005634|nucleus
pt2_07840	G	G1	NA	NA	POPTR_0003s02050	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07841	A	A5S	Potri.T041200	Potri.T041200(AS) Potri.003G025000(BS) Potri.003G028100(DS) Potri.003G013000(DS) Potri.003G013900(DS)	POPTR_0003s02060	sp|F4I171|MD15A_ARATH	Mediator of RNA polymerase II transcription subunit 15a OS=Arabidopsis thaliana GN=MED15A PE=1 SV=1	AT1G15780.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI BLink). | chr1:5430446-5435921 REVERSE LENGTH=1335	LOC_Os08g45080.1	protein|expressed protein	NA	NA	GO:0001676|long-chain fatty acid metabolic process GO:0002213|defense response to insect GO:0006633|fatty acid biosynthetic process GO:0009751|response to salicylic acid stimulus	NA	GO:0005634|nucleus
pt2_07842	A	A1S	Potri.T041200	Potri.T041200(AS)	POPTR_0003s02070	sp|F4I171|MD15A_ARATH	Mediator of RNA polymerase II transcription subunit 15a OS=Arabidopsis thaliana GN=MED15A PE=1 SV=1	AT1G15780.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI BLink). | chr1:5430446-5435921 REVERSE LENGTH=1335	LOC_Os08g45080.1	protein|expressed protein	NA	NA	GO:0001676|long-chain fatty acid metabolic process GO:0002213|defense response to insect GO:0006633|fatty acid biosynthetic process GO:0009751|response to salicylic acid stimulus	NA	GO:0005634|nucleus
pt2_07843	A	A1S	Potri.T041300	Potri.T041300(AS)	POPTR_0003s02080	sp|C0LGQ5|GSO1_ARATH	LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1	AT1G07390.2	| Symbols: AtRLP1, RLP1 | receptor like protein 1 | chr1:2270633-2274654 FORWARD LENGTH=913	LOC_Os04g55420.1	protein|leucine-rich repeat family protein, putative, expressed	IMGA|Medtr5g069580.1	Receptor protein kinase-like protein chr5 28520745-28517219 H EGN_Mt100125 20111014	GO:0006457|protein folding GO:0006857|oligopeptide transport GO:0007165|signal transduction GO:0009408|response to heat GO:0009644|response to high light intensity GO:0034976|response to endoplasmic reticulum stress GO:0042542|response to hydrogen peroxide	NA	GO:0005575|cellular_component
pt2_07844	A	A1S	Potri.003G027900	Potri.003G027900(AS)	POPTR_0003s02090	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07845	A	A1S	Potri.T041500	Potri.T041500(AS)	POPTR_0003s02095	sp|F4I171|MD15A_ARATH	Mediator of RNA polymerase II transcription subunit 15a OS=Arabidopsis thaliana GN=MED15A PE=1 SV=1	AT1G15780.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI BLink). | chr1:5430446-5435921 REVERSE LENGTH=1335	LOC_Os08g41210.3	protein|expressed protein	NA	NA	GO:0001676|long-chain fatty acid metabolic process GO:0002213|defense response to insect GO:0006633|fatty acid biosynthetic process GO:0009751|response to salicylic acid stimulus	NA	GO:0005634|nucleus
pt2_07846	A	A3A	Potri.T041800	Potri.T041800(AA) Potri.003G028700(BS) Potri.003G027600(DS)	POPTR_0003s02105	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07847	A	A1S	Potri.003G014200	Potri.003G014200(AS)	POPTR_0003s02110	sp|Q40392|TMVRN_NICGU	TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1	AT5G36930.2	| Symbols: | Disease resistance protein (TIR-NBS-LRR class) family | chr5:14567771-14571916 REVERSE LENGTH=1191	LOC_Os01g15580.1	protein|disease resistance protein RGA2, putative, expressed	IMGA|contig_62367_1.1	TIR-NBS disease resistance-like protein contig_62367 389-4897 H PREDN 20111014	GO:0006952|defense response GO:0007165|signal transduction	GO:0043531|ADP binding	GO:0005622|intracellular GO:0005737|cytoplasm
pt2_07848	C	C5S	Potri.T072300	Potri.T072300(CS) Potri.T072200(CS) Potri.019G045300(CS) Potri.019G045400(CS) Potri.003G014100(CS)	sp|P59287|CASS_RICCO	Casbene synthase, chloroplastic OS=Ricinus communis GN=RCOM_1574350 PE=1 SV=1	AT5G23960.2	| Symbols: TPS21 | terpene synthase 21 | chr5:8092969-8095128 FORWARD LENGTH=545	LOC_Os08g04500.1	protein|terpene synthase, putative, expressed	IMGA|Medtr5g062230.1	(+)-delta-cadinene synthase isozyme A chr5 25036066-25039371 H EGN_Mt100125 20111014	GO:0008152|metabolic process GO:0016106|sesquiterpenoid biosynthetic process GO:0051762|sesquiterpene biosynthetic process GO:0080027|response to herbivore	GO:0000287|magnesium ion binding GO:0010333|terpene synthase activity GO:0016829|lyase activity GO:0080016|(-)-E-beta-caryophyllene synthase activity GO:0080017|alpha-humulene synthase activity	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_07849	A	A9S	Potri.019G016400	Potri.019G016400(AS) Potri.T112600(AS) Potri.T072200(AS) Potri.019G016500(AS) Potri.019G000400(AS) Potri.003G014100(AS) Potri.T001100(BS) Potri.019G023100(BS) Potri.019G045500(DS)	POPTR_0003s02130	sp|Q6Q3H3|TPSGD_VITVI	(-)-germacrene D synthase OS=Vitis vinifera GN=VIT_19s0014g04930 PE=1 SV=1	AT5G23960.2	| Symbols: TPS21 | terpene synthase 21 | chr5:8092969-8095128 FORWARD LENGTH=545	LOC_Os08g04500.2	protein|terpene synthase, putative, expressed	IMGA|Medtr5g062230.1	(+)-delta-cadinene synthase isozyme A chr5 25036066-25039371 H EGN_Mt100125 20111014	GO:0008152|metabolic process GO:0016106|sesquiterpenoid biosynthetic process GO:0051762|sesquiterpene biosynthetic process GO:0080027|response to herbivore	GO:0000287|magnesium ion binding GO:0010333|terpene synthase activity GO:0016829|lyase activity GO:0080016|(-)-E-beta-caryophyllene synthase activity GO:0080017|alpha-humulene synthase activity	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_07850	A	A6S	Potri.003G014000	Potri.003G014000(AS) Potri.003G027400(DS) Potri.003G029600(DS) Potri.T041500(DS) Potri.003G025500(DS) Potri.003G028000(DS)	POPTR_0003s02140	sp|F4I171|MD15A_ARATH	Mediator of RNA polymerase II transcription subunit 15a OS=Arabidopsis thaliana GN=MED15A PE=1 SV=1	AT1G15780.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI BLink). | chr1:5430446-5435921 REVERSE LENGTH=1335	LOC_Os08g45080.1	protein|expressed protein	NA	NA	GO:0001676|long-chain fatty acid metabolic process GO:0002213|defense response to insect GO:0006633|fatty acid biosynthetic process GO:0009751|response to salicylic acid stimulus	NA	GO:0005634|nucleus
pt2_07851	C	C18S	Potri.T040900	Potri.T040900(CS) Potri.003G013300(CS) Potri.003G028100(CS) Potri.003G029000(CS) Potri.003G013000(CS) Potri.003G029100(CS) Potri.003G013400(CS) Potri.003G013500(CS) Potri.003G025200(CS) Potri.003G028600(CS) Potri.003G028800(CS) Potri.003G028900(CS) Potri.003G027500(CS) Potri.003G028700(CA) Potri.003G013200(CA) Potri.003G013100(CA) Potri.003G029200(CA) Potri.003G013600(CA)	sp|F4I171|MD15A_ARATH	Mediator of RNA polymerase II transcription subunit 15a OS=Arabidopsis thaliana GN=MED15A PE=1 SV=1	AT1G15780.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI BLink). | chr1:5430446-5435921 REVERSE LENGTH=1335	LOC_Os08g41210.3	protein|expressed protein	NA	NA	GO:0001676|long-chain fatty acid metabolic process GO:0002213|defense response to insect GO:0006633|fatty acid biosynthetic process GO:0009751|response to salicylic acid stimulus	NA	GO:0005634|nucleus
pt2_07852	D	D1S	Potri.003G013900	Potri.003G013900(DS)	POPTR_0003s02160	NA	NA	AT1G15780.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI BLink). | chr1:5430446-5435921 REVERSE LENGTH=1335	NA	NA	NA	NA	GO:0001676|long-chain fatty acid metabolic process GO:0002213|defense response to insect GO:0006633|fatty acid biosynthetic process GO:0009751|response to salicylic acid stimulus	NA	GO:0005634|nucleus
pt2_07853	A	A3S	Potri.003G013800	Potri.003G013800(AS) Potri.003G013300(BS) Potri.003G029100(DS)	POPTR_0003s02170	sp|F4I171|MD15A_ARATH	Mediator of RNA polymerase II transcription subunit 15a OS=Arabidopsis thaliana GN=MED15A PE=1 SV=1	AT1G15780.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI BLink). | chr1:5430446-5435921 REVERSE LENGTH=1335	LOC_Os08g45080.1	protein|expressed protein	NA	NA	GO:0001676|long-chain fatty acid metabolic process GO:0002213|defense response to insect GO:0006633|fatty acid biosynthetic process GO:0009751|response to salicylic acid stimulus	NA	GO:0005634|nucleus
pt2_07854	A	A4S	Potri.003G013700	Potri.003G013700(AS) Potri.T041700(AS) Potri.003G013200(DS) Potri.003G027600(DS)	POPTR_0003s02180	sp|C0LGQ5|GSO1_ARATH	LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1	AT2G25470.1	| Symbols: AtRLP21, RLP21 | receptor like protein 21 | chr2:10838420-10841881 FORWARD LENGTH=935	LOC_Os04g55420.1	protein|leucine-rich repeat family protein, putative, expressed	IMGA|Medtr5g069580.1	Receptor protein kinase-like protein chr5 28520745-28517219 H EGN_Mt100125 20111014	GO:0007165|signal transduction	NA	NA
pt2_07855	C	C15S	Potri.005G009000	Potri.005G009000(CS) Potri.005G009100(CA) Potri.005G008700(CA) Potri.005G008800(CA) Potri.005G008900(CA) Potri.003G029400(CA) Potri.003G028200(CA) Potri.003G012800(CA) Potri.T041300(CA) Potri.005G008600(CA) Potri.003G013700(CA) Potri.003G028700(CA) Potri.T040800(CA) Potri.005G009200(CA) Potri.T041700(CA)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07856	R	R	NA	NA	POPTR_0003s02200	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07857	A	A2S	Potri.006G239900	Potri.006G239900(AS) Potri.003G013500(AS)	POPTR_0003s02210	sp|P42158|KC1D_ARATH	Casein kinase I isoform delta-like OS=Arabidopsis thaliana GN=At4g26100 PE=2 SV=2	AT4G28880.1	| Symbols: ckl3 | casein kinase I-like 3 | chr4:14251351-14254048 FORWARD LENGTH=415	LOC_Os01g13060.1	protein|CK1_CaseinKinase_1.1 - CK1 includes the casein kinase 1 kinases, expressed	IMGA|Medtr1g042430.1	Casein kinase chr1 12130628-12134366 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005575|cellular_component
pt2_07858	A	A1S	Potri.003G013400	Potri.003G013400(AS)	POPTR_0003s02220	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07859	A	A7S	Potri.003G013300	Potri.003G013300(AS) Potri.003G013000(AS) Potri.003G028100(BS) Potri.003G025000(BS) Potri.003G013900(BS) Potri.003G029600(DS) Potri.003G012400(DS)	POPTR_0003s02230	sp|F4I171|MD15A_ARATH	Mediator of RNA polymerase II transcription subunit 15a OS=Arabidopsis thaliana GN=MED15A PE=1 SV=1	AT1G15780.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI BLink). | chr1:5430446-5435921 REVERSE LENGTH=1335	NA	NA	NA	NA	GO:0001676|long-chain fatty acid metabolic process GO:0002213|defense response to insect GO:0006633|fatty acid biosynthetic process GO:0009751|response to salicylic acid stimulus	NA	GO:0005634|nucleus
pt2_07860	A	A9S	Potri.003G027300	Potri.003G027300(AS) Potri.001G204900(BS) Potri.003G029100(BS) Potri.003G025000(BS) Potri.003G013000(BS) Potri.003G029600(DS) Potri.003G012400(DS) Potri.003G013800(DS) Potri.003G028000(DS)	POPTR_0003s02240	sp|F4I171|MD15A_ARATH	Mediator of RNA polymerase II transcription subunit 15a OS=Arabidopsis thaliana GN=MED15A PE=1 SV=1	AT1G15780.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI BLink). | chr1:5430446-5435921 REVERSE LENGTH=1335	LOC_Os08g45080.1	protein|expressed protein	NA	NA	GO:0001676|long-chain fatty acid metabolic process GO:0002213|defense response to insect GO:0006633|fatty acid biosynthetic process GO:0009751|response to salicylic acid stimulus	NA	GO:0005634|nucleus
pt2_07861	A	A4S	Potri.003G013200	Potri.003G013200(AS) Potri.003G029200(DS) Potri.003G029400(DS) Potri.003G025100(DS)	POPTR_0003s02250	sp|C0LGQ5|GSO1_ARATH	LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1	AT2G25470.1	| Symbols: AtRLP21, RLP21 | receptor like protein 21 | chr2:10838420-10841881 FORWARD LENGTH=935	LOC_Os04g55420.1	protein|leucine-rich repeat family protein, putative, expressed	IMGA|Medtr5g069580.1	Receptor protein kinase-like protein chr5 28520745-28517219 H EGN_Mt100125 20111014	GO:0006457|protein folding GO:0006857|oligopeptide transport GO:0007165|signal transduction GO:0009408|response to heat GO:0009644|response to high light intensity GO:0034976|response to endoplasmic reticulum stress GO:0042542|response to hydrogen peroxide	NA	GO:0005575|cellular_component
pt2_07862	B	B2S	Potri.006G078800	Potri.006G078800(BS) Potri.003G028400(BS)	POPTR_0003s02260	sp|Q6NZ09|ADRM1_DANRE	Proteasomal ubiquitin receptor ADRM1 OS=Danio rerio GN=adrm1b PE=1 SV=1	AT2G26590.3	| Symbols: RPN13 | regulatory particle non-ATPase 13 | chr2:11311182-11314717 REVERSE LENGTH=300	LOC_Os05g51640.1	protein|adhesion regulating molecule family, putative, expressed	NA	NA	GO:0006499|N-terminal protein myristoylation GO:0007155|cell adhesion GO:0009640|photomorphogenesis GO:0010388|cullin deneddylation GO:0051604|protein maturation	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005737|cytoplasm GO:0016021|integral to membrane
pt2_07863	A	A3S	Potri.003G013000	Potri.003G013000(AS) Potri.003G028100(BS) Potri.003G013900(DS)	POPTR_0003s02270	sp|F4I171|MD15A_ARATH	Mediator of RNA polymerase II transcription subunit 15a OS=Arabidopsis thaliana GN=MED15A PE=1 SV=1	AT1G15780.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI BLink). | chr1:5430446-5435921 REVERSE LENGTH=1335	LOC_Os08g45080.1	protein|expressed protein	NA	NA	GO:0001676|long-chain fatty acid metabolic process GO:0002213|defense response to insect GO:0006633|fatty acid biosynthetic process GO:0009751|response to salicylic acid stimulus	NA	GO:0005634|nucleus
pt2_07864	A	A4S	Potri.003G013000	Potri.003G013000(AS) Potri.003G029100(BS) Potri.001G204900(DS) Potri.003G025000(DS)	POPTR_0003s02280	sp|F4I171|MD15A_ARATH	Mediator of RNA polymerase II transcription subunit 15a OS=Arabidopsis thaliana GN=MED15A PE=1 SV=1	AT1G15780.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI BLink). | chr1:5430446-5435921 REVERSE LENGTH=1335	LOC_Os08g45080.1	protein|expressed protein	NA	NA	GO:0001676|long-chain fatty acid metabolic process GO:0002213|defense response to insect GO:0006633|fatty acid biosynthetic process GO:0009751|response to salicylic acid stimulus	NA	GO:0005634|nucleus
pt2_07865	A	A4S	Potri.003G012900	Potri.003G012900(AS) Potri.018G013500(BS) Potri.T133200(DS) Potri.T093200(DS)	POPTR_0003s02290	sp|Q39214|RPM1_ARATH	Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1 PE=1 SV=1	AT3G07040.1	| Symbols: RPM1, RPS3 | NB-ARC domain-containing disease resistance protein | chr3:2226244-2229024 REVERSE LENGTH=926	LOC_Os09g30220.1	protein|disease resistance protein RPM1, putative, expressed	IMGA|Medtr5g027910.1	Nbs-lrr resistance protein chr5 11402195-11405966 E EGN_Mt100125 20111014	GO:0006952|defense response GO:0009626|plant-type hypersensitive response	GO:0000166|nucleotide binding GO:0005515|protein binding GO:0043531|ADP binding	GO:0005886|plasma membrane
pt2_07866	A	A4S	Potri.003G012800	Potri.003G012800(AS) Potri.003G028700(BS) Potri.003G027200(DS) Potri.003G029400(DS)	POPTR_0003s02300	sp|Q9FL28|FLS2_ARATH	LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana GN=FLS2 PE=1 SV=1	AT1G74190.1	| Symbols: AtRLP15, RLP15 | receptor like protein 15 | chr1:27902590-27906158 REVERSE LENGTH=965	LOC_Os04g55420.1	protein|leucine-rich repeat family protein, putative, expressed	IMGA|Medtr5g069580.1	Receptor protein kinase-like protein chr5 28520745-28517219 H EGN_Mt100125 20111014	GO:0007165|signal transduction	NA	NA
pt2_07867	B	B1S	Potri.003G029500	Potri.003G029500(BS)	POPTR_0003s02310	NA	NA	AT3G22380.2	| Symbols: TIC | time for coffee | chr3:7913181-7918967 FORWARD LENGTH=1555	NA	NA	NA	NA	GO:0009639|response to red or far red light GO:0042752|regulation of circadian rhythm GO:0048574|long-day photoperiodism, flowering	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_07868	A	A2S	Potri.003G029600	Potri.003G029600(AS) Potri.003G012400(AS)	POPTR_0003s02320	sp|F4I171|MD15A_ARATH	Mediator of RNA polymerase II transcription subunit 15a OS=Arabidopsis thaliana GN=MED15A PE=1 SV=1	AT1G15780.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI BLink). | chr1:5430446-5435921 REVERSE LENGTH=1335	LOC_Os08g45080.1	protein|expressed protein	NA	NA	GO:0001676|long-chain fatty acid metabolic process GO:0002213|defense response to insect GO:0006633|fatty acid biosynthetic process GO:0009751|response to salicylic acid stimulus	NA	GO:0005634|nucleus
pt2_07869	A	A1S	Potri.003G012300	Potri.003G012300(AS)	POPTR_0003s02330	NA	NA	AT1G80530.1	| Symbols: | Major facilitator superfamily protein | chr1:30278224-30280247 REVERSE LENGTH=561	LOC_Os04g42420.1	protein|nodulin, putative, expressed	IMGA|Medtr5g022380.1	hypothetical protein chr5 8564572-8561479 E EGN_Mt100125 20111014	GO:0080167|response to karrikin	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_07870	A	A1S	Potri.003G012200	Potri.003G012200(AS)	POPTR_0003s02340	NA	NA	AT1G80530.1	| Symbols: | Major facilitator superfamily protein | chr1:30278224-30280247 REVERSE LENGTH=561	LOC_Os04g42420.1	protein|nodulin, putative, expressed	IMGA|Medtr5g022380.1	hypothetical protein chr5 8564572-8561479 E EGN_Mt100125 20111014	GO:0080167|response to karrikin	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_07871	A	A1S	Potri.003G012100	Potri.003G012100(AS)	POPTR_0003s02350	NA	NA	AT1G15760.1	| Symbols: | Sterile alpha motif (SAM) domain-containing protein | chr1:5425714-5426322 FORWARD LENGTH=202	LOC_Os04g55120.1	protein|jp18, putative, expressed	IMGA|contig_63629_1.1	Jp18 contig_63629 750-1737 F PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_07872	A	A1S	Potri.003G012000	Potri.003G012000(AS)	POPTR_0003s02360	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07873	A	A2S	Potri.003G011900	Potri.003G011900(AS) Potri.003G029700(BS)	POPTR_0003s02370	sp|Q28HE5|S38A6_XENTR	Probable sodium-coupled neutral amino acid transporter 6 OS=Xenopus tropicalis GN=slc38a6 PE=2 SV=1	AT1G80510.1	| Symbols: | Transmembrane amino acid transporter family protein | chr1:30273100-30274569 FORWARD LENGTH=489	LOC_Os06g43700.1	protein|transmembrane amino acid transporter protein, putative, expressed	IMGA|Medtr5g083770.1	Sodium-coupled neutral amino acid transporter chr5 35126215-35128682 H EGN_Mt100125 20111014	GO:0006865|amino acid transport	GO:0015171|amino acid transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_07874	C	C1S	Potri.003G029900	Potri.003G029900(CS)	NA	NA	AT2G01050.1	| Symbols: | zinc ion binding;nucleic acid binding | chr2:68337-69884 REVERSE LENGTH=515	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003676|nucleic acid binding GO:0008270|zinc ion binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07875	A	A1S	Potri.003G030000	Potri.003G030000(AS)	POPTR_0003s02400	sp|Q0WV90|TPR1_ARATH	Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 PE=1 SV=3	AT1G80490.2	| Symbols: TPR1 | TOPLESS-related 1 | chr1:30261094-30266446 REVERSE LENGTH=1120	LOC_Os03g14980.1	protein|lissencephaly type-1-like homology motif, putative, expressed	NA	NA	GO:0010072|primary shoot apical meristem specification	GO:0005515|protein binding	GO:0005634|nucleus GO:0005829|cytosol
pt2_07876	A	A1S	Potri.003G030000	Potri.003G030000(AS)	POPTR_0003s02410	sp|Q0WV90|TPR1_ARATH	Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 PE=1 SV=3	AT1G80490.2	| Symbols: TPR1 | TOPLESS-related 1 | chr1:30261094-30266446 REVERSE LENGTH=1120	LOC_Os03g14980.1	protein|lissencephaly type-1-like homology motif, putative, expressed	NA	NA	GO:0010072|primary shoot apical meristem specification	GO:0005515|protein binding	GO:0005634|nucleus GO:0005829|cytosol
pt2_07877	B	B1S	Potri.003G030100	Potri.003G030100(BS)	POPTR_0003s02420	sp|Q8IUF1|CBWD2_HUMAN	COBW domain-containing protein 2 OS=Homo sapiens GN=CBWD2 PE=1 SV=1	AT1G80480.1	| Symbols: PTAC17 | plastid transcriptionally active 17 | chr1:30258272-30260570 REVERSE LENGTH=444	LOC_Os02g55630.1	protein|COBW domain containing protein, putative, expressed	IMGA|Medtr5g044050.1	COBW domain-containing protein chr5 18952585-18958233 E EGN_Mt100125 20111014	NA	NA	GO:0009295|nucleoid GO:0009507|chloroplast GO:0009508|plastid chromosome GO:0009570|chloroplast stroma
pt2_07878	R	R	NA	NA	POPTR_0003s02430	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07879	A	A1S	Potri.003G030300	Potri.003G030300(AS)	POPTR_0003s02440	sp|P42322|CANB1_NAEGR	Calcineurin subunit B OS=Naegleria gruberi GN=CNB1 PE=3 SV=1	AT3G18430.2	| Symbols: | Calcium-binding EF-hand family protein | chr3:6326180-6327476 FORWARD LENGTH=175	LOC_Os02g55880.1	protein|EF hand family protein, putative, expressed	NA	NA	GO:0006499|N-terminal protein myristoylation GO:0051645|Golgi localization GO:0051646|mitochondrion localization GO:0060151|peroxisome localization	GO:0005509|calcium ion binding	GO:0005773|vacuole
pt2_07880	A	A2S	Potri.003G030400	Potri.003G030400(AS) Potri.003G030500(DS)	POPTR_0003s02450	sp|Q39224|SRG1_ARATH	Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1	AT1G49390.1	| Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr1:18279600-18280873 FORWARD LENGTH=348	LOC_Os06g08032.1	protein|flavonol synthase/flavanone 3-hydroxylase, putative, expressed	IMGA|Medtr5g055680.1	Protein SRG1 chr5 22384306-22387839 F EGN_Mt100125 20111014	GO:0009813|flavonoid biosynthetic process GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_07881	A	A2S	Potri.003G030500	Potri.003G030500(AS) Potri.003G030400(DS)	POPTR_0003s02460	sp|D4N502|DIOX3_PAPSO	Codeine O-demethylase OS=Papaver somniferum GN=CODM PE=1 SV=1	AT1G49390.1	| Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr1:18279600-18280873 FORWARD LENGTH=348	LOC_Os06g08032.1	protein|flavonol synthase/flavanone 3-hydroxylase, putative, expressed	IMGA|Medtr5g055680.1	Protein SRG1 chr5 22384306-22387839 F EGN_Mt100125 20111014	GO:0009813|flavonoid biosynthetic process GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_07882	A	A1S	Potri.003G030600	Potri.003G030600(AS)	POPTR_0003s02470	sp|Q9LMR3|TYRA2_ARATH	Arogenate dehydrogenase 2, chloroplastic OS=Arabidopsis thaliana GN=TYRAAT2 PE=1 SV=1	AT1G15710.1	| Symbols: | prephenate dehydrogenase family protein | chr1:5404505-5405581 FORWARD LENGTH=358	LOC_Os06g49505.1	protein|arogenate dehydrogenase 1, chloroplast precursor, putative, expressed	IMGA|Medtr5g083530.2	Arogenate dehydrogenase chr5 35043508-35041723 E EGN_Mt100125 20111014	GO:0006567|threonine catabolic process GO:0006571|tyrosine biosynthetic process GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0004665|prephenate dehydrogenase (NADP+) activity GO:0008977|prephenate dehydrogenase activity	GO:0009507|chloroplast
pt2_07883	B	B1S	Potri.003G030700	Potri.003G030700(BS)	POPTR_0003s02480	sp|Q8S340|PPA22_ARATH	Purple acid phosphatase 22 OS=Arabidopsis thaliana GN=PAP22 PE=2 SV=1	AT3G52820.1	| Symbols: ATPAP22, PAP22 | purple acid phosphatase 22 | chr3:19574236-19576938 REVERSE LENGTH=434	LOC_Os04g33530.1	protein|Ser/Thr protein phosphatase family protein, putative, expressed	IMGA|Medtr5g092360.1	Purple acid phosphatase chr5 39299066-39296046 E EGN_Mt100125 20111014	GO:0016036|cellular response to phosphate starvation GO:0019375|galactolipid biosynthetic process GO:0045892|negative regulation of transcription, DNA-dependent	GO:0003993|acid phosphatase activity GO:0004722|protein serine/threonine phosphatase activity GO:0016787|hydrolase activity GO:0046872|metal ion binding	GO:0005576|extracellular region
pt2_07884	G	G9	NA	NA	POPTR_0003s02490	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07885	A	A1S	Potri.003G030800	Potri.003G030800(AS)	POPTR_0003s02510	sp|Q8IXU6|S35F2_HUMAN	Solute carrier family 35 member F2 OS=Homo sapiens GN=SLC35F2 PE=1 SV=1	AT3G59310.1	| Symbols: | Eukaryotic protein of unknown function (DUF914) | chr3:21922316-21924313 REVERSE LENGTH=332	LOC_Os05g37200.1	protein|solute carrier family 35 member F2, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_07886	A	A1S	Potri.003G030900	Potri.003G030900(AS)	POPTR_0003s02520	sp|Q54VT8|GLPK_DICDI	Probable glycerol kinase OS=Dictyostelium discoideum GN=gk PE=3 SV=1	AT1G80460.1	| Symbols: NHO1, GLI1 | Actin-like ATPase superfamily protein | chr1:30246960-30249055 REVERSE LENGTH=522	LOC_Os04g55410.1	protein|FGGY family of carbohydrate kinases, putative, expressed	NA	NA	GO:0002237|response to molecule of bacterial origin GO:0005975|carbohydrate metabolic process GO:0006072|glycerol-3-phosphate metabolic process GO:0006635|fatty acid beta-oxidation GO:0009617|response to bacterium GO:0010188|response to microbial phytotoxin GO:0019563|glycerol catabolic process GO:0042742|defense response to bacterium GO:0080167|response to karrikin	GO:0004370|glycerol kinase activity GO:0016773|phosphotransferase activity, alcohol group as acceptor GO:0019200|carbohydrate kinase activity	GO:0005739|mitochondrion GO:0005829|cytosol
pt2_07887	A	A1S	Potri.003G031000	Potri.003G031000(AS)	POPTR_0003s02530	sp|O15818|K0664_DICDI	Protein KIAA0664 homolog OS=Dictyostelium discoideum GN=cluA PE=1 SV=2	AT1G15290.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:5257327-5264814 REVERSE LENGTH=1608	LOC_Os04g55230.1	protein|tetratricopeptide repeat domain containing protein, putative, expressed	NA	NA	GO:0008150|biological_process	NA	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_07888	A	A1S	Potri.003G031100	Potri.003G031100(AS)	POPTR_0003s02540	sp|A5UUN1|FPG_ROSS1	Formamidopyrimidine-DNA glycosylase OS=Roseiflexus sp. (strain RS-1) GN=mutM PE=3 SV=1	AT1G52500.2	| Symbols: FPG-1, ATFPG-1, ATMMH-1, MMH-1 | MUTM homolog-1 | chr1:19560043-19562855 FORWARD LENGTH=390	LOC_Os08g21330.1	protein|formamidopyrimidine-DNA glycosylase, putative, expressed	NA	NA	GO:0000741|karyogamy GO:0006281|DNA repair GO:0006284|base-excision repair GO:0006289|nucleotide-excision repair GO:0006312|mitotic recombination GO:0006979|response to oxidative stress GO:0009560|embryo sac egg cell differentiation	GO:0003676|nucleic acid binding GO:0003684|damaged DNA binding GO:0003906|DNA-(apurinic or apyrimidinic site) lyase activity GO:0008270|zinc ion binding GO:0008534|oxidized purine nucleobase lesion DNA N-glycosylase activity GO:0016799|hydrolase activity, hydrolyzing N-glycosyl compounds GO:0019104|DNA N-glycosylase activity	GO:0005634|nucleus
pt2_07889	A	A1S	Potri.003G031200	Potri.003G031200(AS)	POPTR_0003s02550	sp|Q9S793|FRS8_ARATH	Protein FAR1-RELATED SEQUENCE 8 OS=Arabidopsis thaliana GN=FRS8 PE=2 SV=2	AT1G80010.1	| Symbols: FRS8 | FAR1-related sequence 8 | chr1:30097565-30099846 FORWARD LENGTH=725	LOC_Os02g39540.2	protein|transposon protein, putative, unclassified, expressed	IMGA|Medtr5g099300.1	FAR1-related protein chr5 42508792-42503261 E EGN_Mt100125 20111014	GO:0009639|response to red or far red light GO:0010228|vegetative to reproductive phase transition of meristem GO:0016926|protein desumoylation GO:0050665|hydrogen peroxide biosynthetic process	GO:0008270|zinc ion binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07890	G	G1	NA	NA	POPTR_0003s02560	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07891	A	A1S	Potri.003G031400	Potri.003G031400(AS)	POPTR_0003s02570	sp|Q9SSQ4|FRS6_ARATH	Protein FAR1-RELATED SEQUENCE 6 OS=Arabidopsis thaliana GN=FRS6 PE=2 SV=1	AT1G52520.1	| Symbols: FRS6 | FAR1-related sequence 6 | chr1:19565933-19568248 FORWARD LENGTH=703	LOC_Os02g39540.1	protein|transposon protein, putative, unclassified, expressed	IMGA|Medtr5g099300.1	FAR1-related protein chr5 42508792-42503261 E EGN_Mt100125 20111014	GO:0009639|response to red or far red light	GO:0008270|zinc ion binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07892	A	A1S	Potri.003G031500	Potri.003G031500(AS)	POPTR_0003s02580	sp|Q9SSQ4|FRS6_ARATH	Protein FAR1-RELATED SEQUENCE 6 OS=Arabidopsis thaliana GN=FRS6 PE=2 SV=1	AT1G52520.1	| Symbols: FRS6 | FAR1-related sequence 6 | chr1:19565933-19568248 FORWARD LENGTH=703	LOC_Os04g40060.1	protein|transposon protein, putative, unclassified, expressed	NA	NA	GO:0009639|response to red or far red light	GO:0008270|zinc ion binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07893	A	A1S	Potri.003G031600	Potri.003G031600(AS)	POPTR_0003s02590	sp|Q9LSB8|PP235_ARATH	Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2	AT3G15930.1	| Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr3:5387444-5389690 FORWARD LENGTH=687	LOC_Os01g08120.1	protein|pentatricopeptide, putative, expressed	IMGA|Medtr5g006420.1	Pentatricopeptide repeat-containing protein chr5 674856-677668 E EGN_Mt100125 20111014	GO:0008150|biological_process GO:0016556|mRNA modification	NA	GO:0005575|cellular_component
pt2_07894	C	C1A	Potri.003G031700	Potri.003G031700(CA)	sp|P08770|TRA1_MAIZE	Putative AC transposase OS=Zea mays PE=2 SV=2	AT3G42170.1	| Symbols: | BED zinc finger ;hAT family dimerisation domain | chr3:14321838-14323928 FORWARD LENGTH=696	LOC_Os03g52310.1	protein|transposon protein, putative, unclassified, expressed	IMGA|Medtr5g088330.1	Oligoribonuclease chr5 37283827-37298839 E EGN_Mt100125 20111014	GO:0009791|post-embryonic development	GO:0003677|DNA binding GO:0046983|protein dimerization activity	GO:0005634|nucleus GO:0005829|cytosol
pt2_07895	A	A1S	Potri.003G031700	Potri.003G031700(AS)	POPTR_0003s02610	sp|P08770|TRA1_MAIZE	Putative AC transposase OS=Zea mays PE=2 SV=2	AT3G42170.1	| Symbols: | BED zinc finger ;hAT family dimerisation domain | chr3:14321838-14323928 FORWARD LENGTH=696	LOC_Os03g52310.1	protein|transposon protein, putative, unclassified, expressed	IMGA|Medtr5g088330.1	Oligoribonuclease chr5 37283827-37298839 E EGN_Mt100125 20111014	GO:0009791|post-embryonic development	GO:0003677|DNA binding GO:0046983|protein dimerization activity	GO:0005634|nucleus GO:0005829|cytosol
pt2_07896	A	A1S	Potri.003G031800	Potri.003G031800(AS)	POPTR_0003s02620	sp|B7KEJ8|DNAJ_CYAP7	Chaperone protein DnaJ OS=Cyanothece sp. (strain PCC 7424) GN=dnaJ PE=3 SV=1	AT1G80030.2	| Symbols: | Molecular chaperone Hsp40/DnaJ family protein | chr1:30105398-30108873 REVERSE LENGTH=500	LOC_Os02g56040.1	protein|chaperone protein dnaJ, putative, expressed	IMGA|contig_53503_2.1	Chaperone protein dnaJ contig_53503 5993-1807 H PREDN 20111014	GO:0006457|protein folding GO:0009408|response to heat GO:0010027|thylakoid membrane organization GO:0016117|carotenoid biosynthetic process	GO:0005524|ATP binding GO:0031072|heat shock protein binding GO:0051082|unfolded protein binding	GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009941|chloroplast envelope
pt2_07897	A	A1S	Potri.003G031800	Potri.003G031800(AS)	POPTR_0003s02620	sp|B7KEJ8|DNAJ_CYAP7	Chaperone protein DnaJ OS=Cyanothece sp. (strain PCC 7424) GN=dnaJ PE=3 SV=1	AT1G80030.2	| Symbols: | Molecular chaperone Hsp40/DnaJ family protein | chr1:30105398-30108873 REVERSE LENGTH=500	LOC_Os02g56040.1	protein|chaperone protein dnaJ, putative, expressed	IMGA|contig_53503_2.1	Chaperone protein dnaJ contig_53503 5993-1807 H PREDN 20111014	GO:0006457|protein folding GO:0009408|response to heat GO:0010027|thylakoid membrane organization GO:0016117|carotenoid biosynthetic process	GO:0005524|ATP binding GO:0031072|heat shock protein binding GO:0051082|unfolded protein binding	GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009941|chloroplast envelope
pt2_07898	A	A1S	Potri.003G031800	Potri.003G031800(AS)	POPTR_0003s02620	sp|B7KEJ8|DNAJ_CYAP7	Chaperone protein DnaJ OS=Cyanothece sp. (strain PCC 7424) GN=dnaJ PE=3 SV=1	AT1G80030.2	| Symbols: | Molecular chaperone Hsp40/DnaJ family protein | chr1:30105398-30108873 REVERSE LENGTH=500	LOC_Os02g56040.1	protein|chaperone protein dnaJ, putative, expressed	IMGA|contig_53503_2.1	Chaperone protein dnaJ contig_53503 5993-1807 H PREDN 20111014	GO:0006457|protein folding GO:0009408|response to heat GO:0010027|thylakoid membrane organization GO:0016117|carotenoid biosynthetic process	GO:0005524|ATP binding GO:0031072|heat shock protein binding GO:0051082|unfolded protein binding	GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009941|chloroplast envelope
pt2_07899	A	A1S	Potri.003G031900	Potri.003G031900(AS)	POPTR_0003s02640	sp|Q99PV0|PRP8_MOUSE	Pre-mRNA-processing-splicing factor 8 OS=Mus musculus GN=Prpf8 PE=1 SV=2	AT1G80070.1	| Symbols: SUS2, EMB33, EMB177, EMB14 | Pre-mRNA-processing-splicing factor | chr1:30118052-30127574 FORWARD LENGTH=2359	LOC_Os05g07050.1	protein|pre-mRNA-processing-splicing factor 8, putative, expressed	IMGA|Medtr5g098100.1	Pre-mRNA-processing-splicing factor chr5 41909475-41911658 I EGN_Mt100125 20111014	GO:0000226|microtubule cytoskeleton organization GO:0000398|mRNA splicing, via spliceosome GO:0006346|methylation-dependent chromatin silencing GO:0006499|N-terminal protein myristoylation GO:0007267|cell-cell signaling GO:0009616|virus induced gene silencing GO:0009630|gravitropism GO:0009855|determination of bilateral symmetry GO:0010014|meristem initiation GO:0010050|vegetative phase change GO:0010073|meristem maintenance GO:0010267|production of ta-siRNAs involved in RNA interference GO:0016246|RNA interference GO:0035196|production of miRNAs involved in gene silencing by miRNA	NA	GO:0005634|nucleus GO:0005681|spliceosomal complex GO:0009507|chloroplast GO:0016020|membrane
pt2_07900	A	A3S	Potri.003G032100	Potri.003G032100(AS) Potri.001G204000(DS) Potri.001G203100(DS)	POPTR_0003s02650	sp|Q9LSC2|Y3589_ARATH	PTI1-like tyrosine-protein kinase At3g15890 OS=Arabidopsis thaliana GN=At3g15890 PE=1 SV=1	AT1G52540.1	| Symbols: | Protein kinase superfamily protein | chr1:19570298-19571884 REVERSE LENGTH=350	LOC_Os02g09359.1	protein|BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	IMGA|Medtr1g102190.1	Somatic embryogenesis receptor kinase chr1 30371852-30369131 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_07901	A	A1S	Potri.003G032100	Potri.003G032100(AS)	POPTR_0003s02660	sp|Q9LSC2|Y3589_ARATH	PTI1-like tyrosine-protein kinase At3g15890 OS=Arabidopsis thaliana GN=At3g15890 PE=1 SV=1	AT1G52540.1	| Symbols: | Protein kinase superfamily protein | chr1:19570298-19571884 REVERSE LENGTH=350	LOC_Os02g09359.1	protein|BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	IMGA|Medtr1g102190.1	Somatic embryogenesis receptor kinase chr1 30371852-30369131 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_07902	A	A1S	Potri.003G032200	Potri.003G032200(AS)	POPTR_0003s02670	NA	NA	AT3G15820.1	| Symbols: ROD1 | phosphatidic acid phosphatase-related / PAP2-related | chr3:5351217-5353573 FORWARD LENGTH=301	LOC_Os06g40500.1	protein|expressed protein	NA	NA	GO:0046470|phosphatidylcholine metabolic process	GO:0004142|diacylglycerol cholinephosphotransferase activity	NA
pt2_07903	A	A1S	Potri.003G032300	Potri.003G032300(AS)	POPTR_0003s02680	sp|Q9M7M1|ETR1_PRUPE	Ethylene receptor OS=Prunus persica GN=ETR1 PE=2 SV=1	AT1G66340.1	| Symbols: ETR1, EIN1, ETR, AtETR1 | Signal transduction histidine kinase, hybrid-type, ethylene sensor | chr1:24734698-24737366 FORWARD LENGTH=738	LOC_Os03g49500.1	protein|ethylene receptor, putative, expressed	IMGA|contig_103103_1.1	Ethylene receptor contig_103103 403-3225 E PREDN 20111014	GO:0002237|response to molecule of bacterial origin GO:0006952|defense response GO:0007623|circadian rhythm GO:0009408|response to heat GO:0009625|response to insect GO:0009651|response to salt stress GO:0009690|cytokinin metabolic process GO:0009723|response to ethylene stimulus GO:0009727|detection of ethylene stimulus GO:0009733|response to auxin stimulus GO:0009736|cytokinin mediated signaling pathway GO:0009737|response to abscisic acid stimulus GO:0009739|response to gibberellin stimulus GO:0009871|jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway GO:0010105|negative regulation of ethylene mediated signaling pathway GO:0010119|regulation of stomatal movement GO:0010182|sugar mediated signaling pathway GO:0042742|defense response to bacterium GO:0050665|hydrogen peroxide biosynthetic process GO:0052544|defense response by callose deposition in cell wall GO:0071281|cellular response to iron ion GO:1900140|regulation of seedling development	GO:0000155|two-component sensor activity GO:0000156|two-component response regulator activity GO:0004673|protein histidine kinase activity GO:0004871|signal transducer activity GO:0005515|protein binding GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0042802|identical protein binding GO:0051740|ethylene binding	GO:0005783|endoplasmic reticulum GO:0005789|endoplasmic reticulum membrane GO:0016020|membrane
pt2_07904	A	A1S	Potri.003G032300	Potri.003G032300(AS)	POPTR_0003s02680	sp|Q9M7M1|ETR1_PRUPE	Ethylene receptor OS=Prunus persica GN=ETR1 PE=2 SV=1	AT1G66340.1	| Symbols: ETR1, EIN1, ETR, AtETR1 | Signal transduction histidine kinase, hybrid-type, ethylene sensor | chr1:24734698-24737366 FORWARD LENGTH=738	LOC_Os03g49500.1	protein|ethylene receptor, putative, expressed	IMGA|contig_103103_1.1	Ethylene receptor contig_103103 403-3225 E PREDN 20111014	GO:0002237|response to molecule of bacterial origin GO:0006952|defense response GO:0007623|circadian rhythm GO:0009408|response to heat GO:0009625|response to insect GO:0009651|response to salt stress GO:0009690|cytokinin metabolic process GO:0009723|response to ethylene stimulus GO:0009727|detection of ethylene stimulus GO:0009733|response to auxin stimulus GO:0009736|cytokinin mediated signaling pathway GO:0009737|response to abscisic acid stimulus GO:0009739|response to gibberellin stimulus GO:0009871|jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway GO:0010105|negative regulation of ethylene mediated signaling pathway GO:0010119|regulation of stomatal movement GO:0010182|sugar mediated signaling pathway GO:0042742|defense response to bacterium GO:0050665|hydrogen peroxide biosynthetic process GO:0052544|defense response by callose deposition in cell wall GO:0071281|cellular response to iron ion GO:1900140|regulation of seedling development	GO:0000155|two-component sensor activity GO:0000156|two-component response regulator activity GO:0004673|protein histidine kinase activity GO:0004871|signal transducer activity GO:0005515|protein binding GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0042802|identical protein binding GO:0051740|ethylene binding	GO:0005783|endoplasmic reticulum GO:0005789|endoplasmic reticulum membrane GO:0016020|membrane
pt2_07905	A	A2S	Potri.003G032300	Potri.003G032300(AS) Potri.001G204200(DS)	POPTR_0003s02680	sp|Q9M7M1|ETR1_PRUPE	Ethylene receptor OS=Prunus persica GN=ETR1 PE=2 SV=1	AT1G66340.1	| Symbols: ETR1, EIN1, ETR, AtETR1 | Signal transduction histidine kinase, hybrid-type, ethylene sensor | chr1:24734698-24737366 FORWARD LENGTH=738	LOC_Os03g49500.1	protein|ethylene receptor, putative, expressed	IMGA|contig_103103_1.1	Ethylene receptor contig_103103 403-3225 E PREDN 20111014	GO:0002237|response to molecule of bacterial origin GO:0006952|defense response GO:0007623|circadian rhythm GO:0009408|response to heat GO:0009625|response to insect GO:0009651|response to salt stress GO:0009690|cytokinin metabolic process GO:0009723|response to ethylene stimulus GO:0009727|detection of ethylene stimulus GO:0009733|response to auxin stimulus GO:0009736|cytokinin mediated signaling pathway GO:0009737|response to abscisic acid stimulus GO:0009739|response to gibberellin stimulus GO:0009871|jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway GO:0010105|negative regulation of ethylene mediated signaling pathway GO:0010119|regulation of stomatal movement GO:0010182|sugar mediated signaling pathway GO:0042742|defense response to bacterium GO:0050665|hydrogen peroxide biosynthetic process GO:0052544|defense response by callose deposition in cell wall GO:0071281|cellular response to iron ion GO:1900140|regulation of seedling development	GO:0000155|two-component sensor activity GO:0000156|two-component response regulator activity GO:0004673|protein histidine kinase activity GO:0004871|signal transducer activity GO:0005515|protein binding GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0042802|identical protein binding GO:0051740|ethylene binding	GO:0005783|endoplasmic reticulum GO:0005789|endoplasmic reticulum membrane GO:0016020|membrane
pt2_07906	A	A1S	Potri.003G032400	Potri.003G032400(AS)	POPTR_0003s02690	sp|Q9SSC9|AHP6_ARATH	Histidine-containing phosphotransfer protein 6 OS=Arabidopsis thaliana GN=AHP6 PE=2 SV=2	AT1G80100.1	| Symbols: AHP6, HP6 | histidine phosphotransfer protein 6 | chr1:30133818-30134652 FORWARD LENGTH=154	LOC_Os08g44350.1	protein|histidine-containing phosphotransfer protein, putative, expressed	IMGA|Medtr1g089130.1	Histidine phosphotransfer protein chr1 24402259-24405326 F EGN_Mt100125 20111014	GO:0000160|two-component signal transduction system (phosphorelay) GO:0009735|response to cytokinin stimulus GO:0009736|cytokinin mediated signaling pathway GO:0010089|xylem development	GO:0004871|signal transducer activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_07907	A	A1S	Potri.003G032500	Potri.003G032500(AS)	POPTR_0003s02700	sp|Q9LVZ8|LOR12_ARATH	Protein LURP-one-related 12 OS=Arabidopsis thaliana GN=At3g15810 PE=2 SV=1	AT3G15810.1	| Symbols: | Protein of unknown function (DUF567) | chr3:5348054-5349178 REVERSE LENGTH=220	LOC_Os01g56450.1	protein|DUF567 domain containing protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_07908	A	A1S	Potri.003G032600	Potri.003G032600(AS)	POPTR_0003s02710	sp|Q9ZQG9|E1314_ARATH	Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis thaliana GN=At2g27500 PE=1 SV=2	AT3G15800.1	| Symbols: | Glycosyl hydrolase superfamily protein | chr3:5345051-5346988 FORWARD LENGTH=399	LOC_Os02g10660.1	protein|glycosyl hydrolases family 17, putative, expressed	IMGA|Medtr5g085580.1	"Glucan endo-1,3-beta-glucosidase" chr5 35975309-35973056 F EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0043169|cation binding	GO:0031225|anchored to membrane
pt2_07909	A	A1S	Potri.003G032700	Potri.003G032700(AS)	POPTR_0003s02720	sp|Q9XI36|MBD10_ARATH	Methyl-CpG-binding domain-containing protein 10 OS=Arabidopsis thaliana GN=MBD10 PE=1 SV=1	AT1G15340.1	| Symbols: MBD10 | methyl-CPG-binding domain 10 | chr1:5275895-5277474 REVERSE LENGTH=384	LOC_Os12g42550.2	protein|methyl-CpG binding domain containing protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003677|DNA binding GO:0008327|methyl-CpG binding	GO:0005634|nucleus
pt2_07910	A	A1S	Potri.003G032800	Potri.003G032800(AS)	POPTR_0003s02730	sp|Q41142|PLDA1_RICCO	Phospholipase D alpha 1 OS=Ricinus communis GN=PLD1 PE=1 SV=1	AT3G15730.1	| Symbols: PLDALPHA1, PLD | phospholipase D alpha 1 | chr3:5330835-5333474 FORWARD LENGTH=810	LOC_Os01g07760.2	protein|phospholipase D, putative, expressed	IMGA|Medtr5g011050.1	Phospholipase D chr5 2872473-2867595 E EGN_Mt100125 20111014	GO:0006094|gluconeogenesis GO:0006096|glycolysis GO:0006631|fatty acid metabolic process GO:0006833|water transport GO:0006972|hyperosmotic response GO:0007030|Golgi organization GO:0009266|response to temperature stimulus GO:0009651|response to salt stress GO:0009737|response to abscisic acid stimulus GO:0009789|positive regulation of abscisic acid mediated signaling pathway GO:0009845|seed germination GO:0010119|regulation of stomatal movement GO:0046686|response to cadmium ion GO:0048767|root hair elongation	GO:0003824|catalytic activity GO:0004630|phospholipase D activity GO:0005509|calcium ion binding GO:0005515|protein binding GO:0005546|phosphatidylinositol-4,5-bisphosphate binding	GO:0005634|nucleus GO:0005739|mitochondrion GO:0005829|cytosol GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0009507|chloroplast GO:0016020|membrane GO:0030136|clathrin-coated vesicle
pt2_07911	C	C1S	Potri.003G032900	Potri.003G032900(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07912	A	A1S	Potri.003G033000	Potri.003G033000(AS)	POPTR_0003s02750	sp|Q9XI33|WIN1_ARATH	Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana GN=WIN1 PE=2 SV=1	AT1G15360.1	| Symbols: SHN1, WIN1 | Integrase-type DNA-binding superfamily protein | chr1:5283609-5284506 FORWARD LENGTH=199	LOC_Os02g10760.1	protein|AP2 domain containing protein, expressed	IMGA|Medtr5g075570.1	Ethylene-responsive transcription factor 1A chr5 31143909-31142184 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009414|response to water deprivation GO:0009873|ethylene mediated signaling pathway GO:0010143|cutin biosynthetic process GO:0010166|wax metabolic process	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_07913	A	A1S	Potri.003G033100	Potri.003G033100(AS)	POPTR_0003s02760	NA	NA	AT3G21290.1	| Symbols: | dentin sialophosphoprotein-related | chr3:7482318-7488676 FORWARD LENGTH=1192	LOC_Os03g08820.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_07914	A	A1S	Potri.003G033200	Potri.003G033200(AS)	POPTR_0003s02770	sp|Q9MT28|THRC_SOLTU	Threonine synthase, chloroplastic OS=Solanum tuberosum PE=2 SV=1	AT1G72810.1	| Symbols: | Pyridoxal-5'-phosphate-dependent enzyme family protein | chr1:27398760-27400393 REVERSE LENGTH=516	LOC_Os05g47640.1	protein|threonine synthase, chloroplast precursor, putative, expressed	NA	NA	GO:0006520|cellular amino acid metabolic process GO:0008152|metabolic process GO:0009088|threonine biosynthetic process	GO:0003824|catalytic activity GO:0004795|threonine synthase activity GO:0030170|pyridoxal phosphate binding	GO:0009507|chloroplast
pt2_07915	A	A1S	Potri.003G033300	Potri.003G033300(AS)	POPTR_0003s02780	NA	NA	AT4G19160.2	| Symbols: | unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr4:10477772-10479947 FORWARD LENGTH=453	NA	NA	NA	NA	GO:0008150|biological_process	NA	GO:0005634|nucleus GO:0009507|chloroplast
pt2_07916	A	A2S	Potri.003G033300	Potri.003G033300(AS) Potri.001G193400(DS)	POPTR_0003s02790	NA	NA	AT4G19160.2	| Symbols: | unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr4:10477772-10479947 FORWARD LENGTH=453	NA	NA	NA	NA	GO:0008150|biological_process	NA	GO:0005634|nucleus GO:0009507|chloroplast
pt2_07917	C	C2S	Potri.003G033400	Potri.003G033400(CS) Potri.T166300(CS)	NA	NA	AT4G24190.2	| Symbols: SHD, AtHsp90.7, AtHsp90-7 | Chaperone protein htpG family protein | chr4:12551902-12555851 REVERSE LENGTH=823	NA	NA	NA	NA	GO:0006094|gluconeogenesis GO:0006096|glycolysis GO:0006457|protein folding GO:0006499|N-terminal protein myristoylation GO:0006833|water transport GO:0006950|response to stress GO:0006972|hyperosmotic response GO:0007030|Golgi organization GO:0009266|response to temperature stimulus GO:0009306|protein secretion GO:0009408|response to heat GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009644|response to high light intensity GO:0009651|response to salt stress GO:0009934|regulation of meristem structural organization GO:0010075|regulation of meristem growth GO:0034976|response to endoplasmic reticulum stress GO:0042542|response to hydrogen peroxide GO:0046686|response to cadmium ion	GO:0005524|ATP binding GO:0051082|unfolded protein binding	GO:0005634|nucleus GO:0005739|mitochondrion GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005783|endoplasmic reticulum GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0009507|chloroplast GO:0016020|membrane GO:0048046|apoplast
pt2_07918	C	C1A	Potri.T166300	Potri.T166300(CA)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07919	A	A1S	Potri.003G033500	Potri.003G033500(AS)	POPTR_0003s02820	sp|Q91W34|CP058_MOUSE	UPF0420 protein C16orf58 homolog OS=Mus musculus PE=2 SV=1	AT3G45890.1	| Symbols: RUS1 | Protein of unknown function, DUF647 | chr3:16871697-16874100 FORWARD LENGTH=608	LOC_Os04g22360.1	protein|DUF647 domain containing protein, putative, expressed	IMGA|Medtr5g025160.1	hypothetical protein chr5 9942962-9949542 E EGN_Mt100125 20111014	GO:0010224|response to UV-B GO:0032502|developmental process	NA	GO:0005739|mitochondrion GO:0009536|plastid GO:0009941|chloroplast envelope
pt2_07920	A	A1S	Potri.003G033600	Potri.003G033600(AS)	POPTR_0003s02830	sp|Q9H1D9|RPC6_HUMAN	DNA-directed RNA polymerase III subunit RPC6 OS=Homo sapiens GN=POLR3F PE=1 SV=1	AT5G23710.1	| Symbols: | DNA binding;DNA-directed RNA polymerases | chr5:7996528-7997220 REVERSE LENGTH=230	LOC_Os06g40110.1	protein|RNA polymerase Rpc34 subunit family protein, expressed	NA	NA	GO:0006351|transcription, DNA-dependent	GO:0003677|DNA binding GO:0003899|DNA-directed RNA polymerase activity	GO:0005634|nucleus GO:0009507|chloroplast
pt2_07921	A	A1S	Potri.003G033700	Potri.003G033700(AS)	POPTR_0003s02840	sp|Q84WC6|UBP7_ARATH	Ubiquitin carboxyl-terminal hydrolase 7 OS=Arabidopsis thaliana GN=UBP7 PE=1 SV=1	AT3G21280.1	| Symbols: UBP7 | ubiquitin-specific protease 7 | chr3:7478166-7482037 REVERSE LENGTH=532	LOC_Os01g36930.1	protein|ubiquitin carboxyl-terminal hydrolase 6, putative, expressed	NA	NA	GO:0006511|ubiquitin-dependent protein catabolic process GO:0009640|photomorphogenesis GO:0010388|cullin deneddylation GO:0016567|protein ubiquitination GO:0016571|histone methylation GO:0016579|protein deubiquitination GO:0045893|positive regulation of transcription, DNA-dependent	GO:0004221|ubiquitin thiolesterase activity GO:0004843|ubiquitin-specific protease activity GO:0005516|calmodulin binding	GO:0005575|cellular_component GO:0005634|nucleus GO:0009506|plasmodesma
pt2_07922	A	A1S	Potri.003G033800	Potri.003G033800(AS)	POPTR_0003s02850	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07923	A	A9S	Potri.003G033900	Potri.003G033900(AS) Potri.017G104400(DS) Potri.011G075700(DS) Potri.018G090500(DS) Potri.015G065200(DS) Potri.001G156800(DS) Potri.011G079200(DS) Potri.014G190100(DS) Potri.017G057600(DS)	POPTR_0003s02860	NA	NA	NA	NA	LOC_Os10g16870.1	protein|zinc knuckle family protein, expressed	NA	NA	NA	NA	NA
pt2_07924	B	B2S	Potri.003G034000	Potri.003G034000(BS) Potri.017G104500(BS)	POPTR_0003s02865	NA	NA	NA	NA	LOC_Os08g39580.1	protein|zinc knuckle family protein, expressed	NA	NA	NA	NA	NA
pt2_07925	B	B3S	Potri.015G065200	Potri.015G065200(BS) Potri.018G060600(DS) Potri.017G073600(DS)	POPTR_0003s02870	NA	NA	NA	NA	LOC_Os08g39580.1	protein|zinc knuckle family protein, expressed	NA	NA	NA	NA	NA
pt2_07926	B	B1S	Potri.003G034100	Potri.003G034100(BS)	POPTR_0003s02880	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07927	A	A1S	Potri.003G034200	Potri.003G034200(AS)	POPTR_0003s02890	sp|O82155|DOF17_ARATH	Dof zinc finger protein DOF1.7 OS=Arabidopsis thaliana GN=DOF1.7 PE=2 SV=1	AT1G51700.1	| Symbols: ADOF1, DOF1 | DOF zinc finger protein 1 | chr1:19174266-19174850 FORWARD LENGTH=194	LOC_Os02g49440.1	protein|dof zinc finger domain containing protein, putative, expressed	IMGA|contig_99303_1.1	Dof zinc finger protein contig_99303 304-1771 F PREDN 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0010200|response to chitin	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07928	A	A2S	Potri.003G034300	Potri.003G034300(AS) Potri.001G197300(DS)	POPTR_0003s02900	sp|Q39247|2ABB_ARATH	Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform OS=Arabidopsis thaliana GN=PP2AB2 PE=2 SV=1	AT1G17720.1	| Symbols: ATB BETA | Protein phosphatase 2A, regulatory subunit PR55 | chr1:6093949-6098065 REVERSE LENGTH=501	LOC_Os02g13110.1	protein|serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed	IMGA|Medtr1g040810.1	Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform chr1 11248594-11250096 H EGN_Mt100125 20111014	GO:0006470|protein dephosphorylation GO:0007165|signal transduction	GO:0000166|nucleotide binding GO:0008601|protein phosphatase type 2A regulator activity	GO:0000159|protein phosphatase type 2A complex GO:0005737|cytoplasm GO:0005829|cytosol
pt2_07929	A	A1S	Potri.003G034500	Potri.003G034500(AS)	POPTR_0003s02910	NA	NA	NA	NA	NA	NA	IMGA|Medtr5g088650.1	hypothetical protein chr5 37425187-37423668 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003676|nucleic acid binding GO:0008270|zinc ion binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07930	R	R	NA	NA	POPTR_0003s02930	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07931	A	A1S	Potri.003G034600	Potri.003G034600(AS)	POPTR_0003s02940	sp|Q9FZ62|PPSP2_ARATH	Inorganic pyrophosphatase 2 OS=Arabidopsis thaliana GN=At1g17710 PE=2 SV=1	AT1G17710.1	| Symbols: | Pyridoxal phosphate phosphatase-related protein | chr1:6090763-6091975 REVERSE LENGTH=279	LOC_Os01g52230.1	protein|phosphoethanolamine/phosphocholine phosphatase, putative, expressed	NA	NA	GO:0008152|metabolic process GO:0016036|cellular response to phosphate starvation GO:0019375|galactolipid biosynthetic process GO:0045892|negative regulation of transcription, DNA-dependent	GO:0016791|phosphatase activity GO:0052731|phosphocholine phosphatase activity GO:0052732|phosphoethanolamine phosphatase activity	GO:0005634|nucleus
pt2_07932	A	A1S	Potri.003G034700	Potri.003G034700(AS)	POPTR_0003s02950	sp|Q8LGU1|AB8C_ARATH	ABC transporter C family member 8 OS=Arabidopsis thaliana GN=ABCC8 PE=2 SV=3	AT3G21250.2	| Symbols: MRP6, ABCC8 | multidrug resistance-associated protein 6 | chr3:7457668-7463261 REVERSE LENGTH=1464	LOC_Os05g10730.1	protein|ABC transporter, ATP-binding protein, putative, expressed	IMGA|Medtr5g094830.1	Multidrug resistance protein ABC transporter family chr5 40415181-40408863 E EGN_Mt100125 20111014	GO:0006810|transport GO:0055085|transmembrane transport	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0000325|plant-type vacuole GO:0005774|vacuolar membrane GO:0005886|plasma membrane GO:0016021|integral to membrane
pt2_07933	A	A1S	Potri.003G034700	Potri.003G034700(AS)	POPTR_0003s02950	sp|Q8LGU1|AB8C_ARATH	ABC transporter C family member 8 OS=Arabidopsis thaliana GN=ABCC8 PE=2 SV=3	AT3G21250.2	| Symbols: MRP6, ABCC8 | multidrug resistance-associated protein 6 | chr3:7457668-7463261 REVERSE LENGTH=1464	LOC_Os05g10730.1	protein|ABC transporter, ATP-binding protein, putative, expressed	IMGA|Medtr5g094830.1	Multidrug resistance protein ABC transporter family chr5 40415181-40408863 E EGN_Mt100125 20111014	GO:0006810|transport GO:0055085|transmembrane transport	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0000325|plant-type vacuole GO:0005774|vacuolar membrane GO:0005886|plasma membrane GO:0016021|integral to membrane
pt2_07934	C	C1S	Potri.003G034700	Potri.003G034700(CS)	sp|Q8LGU1|AB8C_ARATH	ABC transporter C family member 8 OS=Arabidopsis thaliana GN=ABCC8 PE=2 SV=3	AT3G21250.2	| Symbols: MRP6, ABCC8 | multidrug resistance-associated protein 6 | chr3:7457668-7463261 REVERSE LENGTH=1464	LOC_Os05g10730.1	protein|ABC transporter, ATP-binding protein, putative, expressed	IMGA|Medtr5g094830.1	Multidrug resistance protein ABC transporter family chr5 40415181-40408863 E EGN_Mt100125 20111014	GO:0006810|transport GO:0055085|transmembrane transport	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0000325|plant-type vacuole GO:0005774|vacuolar membrane GO:0005886|plasma membrane GO:0016021|integral to membrane
pt2_07935	A	A1S	Potri.003G034800	Potri.003G034800(AS)	POPTR_0003s02955	sp|Q8LGU1|AB8C_ARATH	ABC transporter C family member 8 OS=Arabidopsis thaliana GN=ABCC8 PE=2 SV=3	AT3G21250.1	| Symbols: ATMRP6, MRP6, ABCC8 | multidrug resistance-associated protein 6 | chr3:7457668-7463261 REVERSE LENGTH=1453	LOC_Os05g10730.2	protein|ABC transporter, ATP-binding protein, putative, expressed	IMGA|Medtr5g094830.1	Multidrug resistance protein ABC transporter family chr5 40415181-40408863 E EGN_Mt100125 20111014	GO:0006810|transport GO:0055085|transmembrane transport	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0000325|plant-type vacuole GO:0005774|vacuolar membrane GO:0005886|plasma membrane GO:0016021|integral to membrane
pt2_07936	A	A1S	Potri.003G034900	Potri.003G034900(AS)	POPTR_0003s02960	sp|P0DH62|Y4407_SELML	Inactive protein kinase SELMODRAFT_444075 OS=Selaginella moellendorffii GN=SELMODRAFT_444075 PE=2 SV=1	AT3G13690.1	| Symbols: | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain | chr3:4486920-4490011 FORWARD LENGTH=753	LOC_Os01g41870.2	protein|protein kinase, putative, expressed	IMGA|Medtr5g034210.1	Receptor-like-kinase chr5 14377604-14370310 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0046777|protein autophosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005575|cellular_component GO:0005886|plasma membrane
pt2_07937	A	A1S	Potri.003G034900	Potri.003G034900(AS)	POPTR_0003s02960	sp|P0DH62|Y4407_SELML	Inactive protein kinase SELMODRAFT_444075 OS=Selaginella moellendorffii GN=SELMODRAFT_444075 PE=2 SV=1	AT3G13690.1	| Symbols: | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain | chr3:4486920-4490011 FORWARD LENGTH=753	LOC_Os01g41870.2	protein|protein kinase, putative, expressed	IMGA|Medtr5g034210.1	Receptor-like-kinase chr5 14377604-14370310 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0046777|protein autophosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005575|cellular_component GO:0005886|plasma membrane
pt2_07938	A	A1S	Potri.003G035000	Potri.003G035000(AS)	POPTR_0003s02970	sp|Q9YGP5|RBPMS_XENLA	RNA-binding protein with multiple splicing OS=Xenopus laevis GN=rbpms PE=2 SV=1	AT3G13700.2	| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr3:4490859-4492632 REVERSE LENGTH=287	LOC_Os06g05800.2	protein|RNA recognition motif containing protein, putative, expressed	IMGA|Medtr5g016680.1	RNA-binding protein with multiple splicing chr5 5742637-5748185 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07939	A	A1S	Potri.003G035200	Potri.003G035200(AS)	POPTR_0003s02980	sp|Q9C889|PR1F2_ARATH	PRA1 family protein F2 OS=Arabidopsis thaliana GN=PRA1F2 PE=1 SV=1	AT1G55190.1	| Symbols: PRA1.F2, PRA7 | PRA1 (Prenylated rab acceptor) family protein | chr1:20588450-20589019 FORWARD LENGTH=189	LOC_Os01g10010.2	protein|prenylated rab acceptor, putative, expressed	IMGA|Medtr5g083490.1	PRA1 family protein B1 chr5 35022755-35020420 E EGN_Mt100125 20111014	GO:0016192|vesicle-mediated transport	NA	GO:0005774|vacuolar membrane GO:0005783|endoplasmic reticulum GO:0005794|Golgi apparatus GO:0009507|chloroplast
pt2_07940	A	A2S	Potri.003G035300	Potri.003G035300(AS) Potri.003G037700(AS)	POPTR_0003s02990	sp|Q9C888|PLDE1_ARATH	Phospholipase D epsilon OS=Arabidopsis thaliana GN=PLDEPSILON PE=2 SV=1	AT1G55180.1	| Symbols: PLDEPSILON, PLDALPHA4 | phospholipase D alpha 4 | chr1:20585057-20587629 REVERSE LENGTH=762	LOC_Os09g25390.1	protein|phospholipase D, putative, expressed	IMGA|Medtr5g011060.1	Phospholipase D chr5 2878311-2874091 H EGN_Mt100125 20111014	GO:0006970|response to osmotic stress GO:0006995|cellular response to nitrogen starvation GO:0008152|metabolic process GO:0009395|phospholipid catabolic process GO:0009791|post-embryonic development GO:0016036|cellular response to phosphate starvation GO:0016049|cell growth GO:0045848|positive regulation of nitrogen utilization GO:0046470|phosphatidylcholine metabolic process GO:0048364|root development GO:0051365|cellular response to potassium ion starvation	GO:0003824|catalytic activity GO:0004630|phospholipase D activity GO:0005509|calcium ion binding	GO:0005886|plasma membrane GO:0016020|membrane
pt2_07941	A	A2S	Potri.003G037800	Potri.003G037800(AS) Potri.003G035400(AS)	POPTR_0003s03000	sp|Q7FRS8|CNBLA_ARATH	Calcineurin B-like protein 10 OS=Arabidopsis thaliana GN=CBL10 PE=1 SV=1	AT4G33000.2	| Symbols: CBL10, SCABP8, ATCBL10 | calcineurin B-like protein 10 | chr4:15924821-15926398 FORWARD LENGTH=246	LOC_Os01g39770.1	protein|calcineurin B, putative, expressed	IMGA|Medtr1g016430.3	Calcineurin B-like protein chr1 4767863-4762536 F EGN_Mt100125 20111014	GO:0000271|polysaccharide biosynthetic process GO:0009825|multidimensional cell growth GO:0009932|cell tip growth GO:0010817|regulation of hormone levels GO:0019722|calcium-mediated signaling GO:0042538|hyperosmotic salinity response GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0048767|root hair elongation GO:0071555|cell wall organization GO:2000021|regulation of ion homeostasis	GO:0005509|calcium ion binding GO:0005515|protein binding	GO:0005737|cytoplasm GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009705|plant-type vacuole membrane
pt2_07942	A	A2S	Potri.003G035700	Potri.003G035700(AS) Potri.003G037900(BS)	POPTR_0003s03010	NA	NA	AT1G55170.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14750.1); Has 13439 Blast hits to 8993 proteins in 828 species: Archae - 344; Bacteria - 1469; Metazoa - 6958; Fungi - 1008; Plants - 683; Viruses - 29; Other Eukaryotes - 2948 (source: NCBI BLink). | chr1:20580578-20581706 FORWARD LENGTH=283	LOC_Os12g09089.2	protein|protein kinase PKN/PRK1, effector, putative, expressed	IMGA|Medtr5g072760.1	hypothetical protein chr5 29972181-29976763 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_07943	G	G1	NA	NA	POPTR_0003s03020	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07944	A	A1S	Potri.003G038100	Potri.003G038100(AS)	POPTR_0003s03025	NA	NA	AT4G01560.1	| Symbols: MEE49 | Ribosomal RNA processing Brix domain protein | chr4:677266-679164 REVERSE LENGTH=343	LOC_Os06g04600.2	protein|Brix domain containing protein, putative, expressed	NA	NA	GO:0006626|protein targeting to mitochondrion GO:0009640|photomorphogenesis GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009909|regulation of flower development GO:0009933|meristem structural organization GO:0010162|seed dormancy process GO:0010182|sugar mediated signaling pathway GO:0010228|vegetative to reproductive phase transition of meristem GO:0010564|regulation of cell cycle process GO:0016567|protein ubiquitination GO:0019915|lipid storage GO:0048366|leaf development GO:0048825|cotyledon development GO:0050826|response to freezing	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005829|cytosol
pt2_07945	A	A3S	Potri.003G038200	Potri.003G038200(AS) Potri.003G035900(AS) Potri.001G200100(DS)	POPTR_0003s03030	sp|Q94IA6|C90D1_ARATH	3-epi-6-deoxocathasterone 23-monooxygenase OS=Arabidopsis thaliana GN=CYP90D1 PE=2 SV=1	AT3G13730.1	| Symbols: CYP90D1 | cytochrome P450, family 90, subfamily D, polypeptide 1 | chr3:4498330-4500836 REVERSE LENGTH=491	LOC_Os01g10040.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g021220.1	Cytochrome P450 90C1 chr5 7906123-7900243 H EGN_Mt100125 20111014	GO:0016132|brassinosteroid biosynthetic process GO:0048366|leaf development GO:0048441|petal development GO:0048443|stamen development GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0016709|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0009507|chloroplast
pt2_07946	A	A2S	Potri.003G036000	Potri.003G036000(AS) Potri.003G038300(AS)	POPTR_0003s03040	sp|Q5QMN3|RH20_ORYSJ	DEAD-box ATP-dependent RNA helicase 20 OS=Oryza sativa subsp. japonica GN=Os01g0197200 PE=3 SV=2	AT1G55150.1	| Symbols: | DEA(D/H)-box RNA helicase family protein | chr1:20574634-20577141 FORWARD LENGTH=501	LOC_Os01g10050.1	protein|DEAD-box ATP-dependent RNA helicase, putative, expressed	IMGA|contig_74166_1.1	ATP dependent RNA helicase contig_74166 1-4555 F PREDN 20111014	NA	GO:0003676|nucleic acid binding GO:0004386|helicase activity GO:0005524|ATP binding GO:0008026|ATP-dependent helicase activity	GO:0005634|nucleus GO:0005829|cytosol
pt2_07947	C	C1S	Potri.003G038400	Potri.003G038400(CS)	NA	NA	AT1G55140.1	| Symbols: | Ribonuclease III family protein | chr1:20572503-20574332 REVERSE LENGTH=237	LOC_Os11g13420.3	protein|RNA binding protein, putative, expressed	NA	NA	GO:0006396|RNA processing	GO:0003723|RNA binding GO:0004525|ribonuclease III activity	GO:0009507|chloroplast
pt2_07948	A	A2S	Potri.003G038500	Potri.003G038500(AS) Potri.001G200400(DS)	POPTR_0003s03060	sp|Q9SCW1|BGAL1_ARATH	Beta-galactosidase 1 OS=Arabidopsis thaliana GN=BGAL1 PE=1 SV=1	AT3G13750.1	| Symbols: BGAL1 | beta galactosidase 1 | chr3:4511192-4515756 FORWARD LENGTH=847	LOC_Os01g39830.1	protein|beta-galactosidase, putative, expressed	IMGA|Medtr5g021190.1	Beta-galactosidase chr5 7885693-7880571 E EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0032880|regulation of protein localization GO:0042744|hydrogen peroxide catabolic process GO:0048767|root hair elongation	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0004565|beta-galactosidase activity GO:0030246|carbohydrate binding GO:0043169|cation binding	GO:0005576|extracellular region GO:0005618|cell wall GO:0009505|plant-type cell wall GO:0009506|plasmodesma
pt2_07949	C	C1S	Potri.003G038600	Potri.003G038600(CS)	NA	NA	AT1G17665.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 11 growth stages; Has 149 Blast hits to 146 proteins in 39 species: Archae - 0; Bacteria - 4; Metazoa - 21; Fungi - 5; Plants - 30; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink). | chr1:6072432-6074484 REVERSE LENGTH=338	LOC_Os01g10080.2	protein|expressed protein	NA	NA	GO:0007623|circadian rhythm GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_07950	A	A1S	Potri.003G038600	Potri.003G038600(AS)	POPTR_0003s03080	NA	NA	AT1G17665.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 11 growth stages; Has 149 Blast hits to 146 proteins in 39 species: Archae - 0; Bacteria - 4; Metazoa - 21; Fungi - 5; Plants - 30; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink). | chr1:6072432-6074484 REVERSE LENGTH=338	LOC_Os01g10080.2	protein|expressed protein	NA	NA	GO:0007623|circadian rhythm GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_07951	A	A1S	Potri.003G038700	Potri.003G038700(AS)	POPTR_0003s03090	sp|Q5RDY2|TM9S4_PONAB	Transmembrane 9 superfamily member 4 OS=Pongo abelii GN=TM9SF4 PE=2 SV=1	AT3G13772.1	| Symbols: TMN7, AtTMN7 | transmembrane nine 7 | chr3:4521712-4524394 REVERSE LENGTH=641	LOC_Os06g37160.1	protein|transmembrane 9 superfamily member, putative, expressed	IMGA|Medtr1g014080.1	Transmembrane 9 superfamily protein member chr1 3646805-3651644 F EGN_Mt100125 20111014	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0006878|cellular copper ion homeostasis GO:0006882|cellular zinc ion homeostasis GO:0009086|methionine biosynthetic process	NA	GO:0005576|extracellular region GO:0005634|nucleus GO:0005737|cytoplasm GO:0005768|endosome GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0016021|integral to membrane
pt2_07952	A	A1S	Potri.003G038800	Potri.003G038800(AS)	POPTR_0003s03100	sp|O22607|MSI4_ARATH	WD-40 repeat-containing protein MSI4 OS=Arabidopsis thaliana GN=MSI4 PE=1 SV=3	AT2G19520.1	| Symbols: FVE, ACG1, MSI4, NFC4, NFC04, ATMSI4 | Transducin family protein / WD-40 repeat family protein | chr2:8456006-8459235 FORWARD LENGTH=507	LOC_Os01g51300.2	protein|WD domain, G-beta repeat domain containing protein, expressed	IMGA|Medtr5g024090.1	Glutamate-rich WD repeat-containing protein chr5 9390876-9395536 H EGN_Mt100125 20111014	GO:0006281|DNA repair GO:0009826|unidimensional cell growth GO:0009908|flower development GO:0009965|leaf morphogenesis GO:0010090|trichome morphogenesis GO:0010224|response to UV-B	GO:0046872|metal ion binding	GO:0005634|nucleus GO:0005730|nucleolus GO:0005737|cytoplasm GO:0005829|cytosol GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_07953	G	G1	NA	NA	POPTR_0003s03110	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07954	A	A1S	Potri.003G038900	Potri.003G038900(AS)	POPTR_0003s03120	sp|P93042|RHD3_ARATH	Protein ROOT HAIR DEFECTIVE 3 OS=Arabidopsis thaliana GN=RHD3 PE=1 SV=1	AT3G13870.1	| Symbols: RHD3 | Root hair defective 3 GTP-binding protein (RHD3) | chr3:4565762-4571109 REVERSE LENGTH=802	LOC_Os01g39310.1	protein|SEY1, putative, expressed	NA	NA	NA	GO:0000166|nucleotide binding GO:0016817|hydrolase activity, acting on acid anhydrides	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07955	A	A1S	Potri.003G039000	Potri.003G039000(AS)	POPTR_0003s03130	sp|Q9S746|HTH_ARATH	Protein HOTHEAD OS=Arabidopsis thaliana GN=HTH PE=1 SV=1	AT1G72970.1	| Symbols: HTH, EDA17 | Glucose-methanol-choline (GMC) oxidoreductase family protein | chr1:27452872-27455706 FORWARD LENGTH=594	LOC_Os09g19930.1	protein|HOTHEAD precursor, putative, expressed	IMGA|Medtr5g011020.1	Choline dehydrogenase chr5 2846622-2851422 H EGN_Mt100125 20111014	GO:0006066|alcohol metabolic process GO:0007267|cell-cell signaling GO:0009553|embryo sac development GO:0010430|fatty acid omega-oxidation GO:0055114|oxidation-reduction process	GO:0008812|choline dehydrogenase activity GO:0016614|oxidoreductase activity, acting on CH-OH group of donors GO:0016832|aldehyde-lyase activity GO:0046593|mandelonitrile lyase activity GO:0050660|flavin adenine dinucleotide binding	GO:0005576|extracellular region
pt2_07956	C	C1S	Potri.003G039100	Potri.003G039100(CS)	sp|Q8RWW0|ALE2_ARATH	Receptor-like serine/threonine-protein kinase ALE2 OS=Arabidopsis thaliana GN=ALE2 PE=1 SV=1	AT5G56890.1	| Symbols: | Protein kinase superfamily protein | chr5:23010801-23015559 REVERSE LENGTH=1113	LOC_Os01g51290.2	protein|protein kinase family protein, putative, expressed	IMGA|Medtr1g086870.1	Protein kinase 2B chr1 23242777-23246932 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_07957	C	C1S	Potri.001G150700	Potri.001G150700(CS)	sp|Q9LZ20|CAAT6_ARATH	Cationic amino acid transporter 6, chloroplastic OS=Arabidopsis thaliana GN=CAT6 PE=2 SV=1	AT5G04770.1	| Symbols: ATCAT6, CAT6 | cationic amino acid transporter 6 | chr5:1379118-1382304 FORWARD LENGTH=583	LOC_Os04g45950.2	protein|amino acid permease family protein, putative, expressed	NA	NA	GO:0003333|amino acid transmembrane transport GO:0006810|transport GO:0009624|response to nematode	GO:0015171|amino acid transmembrane transporter activity GO:0015326|cationic amino acid transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_07958	A	A1S	Potri.001G150400	Potri.001G150400(AS)	POPTR_0003s03170	sp|Q9LKI5|XPF_ARATH	DNA repair endonuclease UVH1 OS=Arabidopsis thaliana GN=UVH1 PE=1 SV=2	AT5G41150.1	| Symbols: UVH1, ATRAD1, RAD1 | Restriction endonuclease, type II-like superfamily protein | chr5:16473044-16476919 REVERSE LENGTH=956	LOC_Os03g01100.1	protein|endonuclease, putative, expressed	IMGA|Medtr5g013480.1	DNA repair endonuclease UVH1 chr5 4027631-4021517 E EGN_Mt100125 20111014	GO:0000710|meiotic mismatch repair GO:0000712|resolution of meiotic recombination intermediates GO:0000724|double-strand break repair via homologous recombination GO:0006259|DNA metabolic process GO:0006281|DNA repair GO:0006289|nucleotide-excision repair GO:0006296|nucleotide-excision repair, DNA incision, 5'-to lesion GO:0006979|response to oxidative stress GO:0009314|response to radiation	GO:0000014|single-stranded DNA specific endodeoxyribonuclease activity GO:0003677|DNA binding GO:0003697|single-stranded DNA binding GO:0004518|nuclease activity	GO:0000110|nucleotide-excision repair factor 1 complex GO:0005634|nucleus
pt2_07959	A	A1S	Potri.001G150300	Potri.001G150300(AS)	POPTR_0003s03180	NA	NA	AT4G17070.1	| Symbols: | peptidyl-prolyl cis-trans isomerases | chr4:9595523-9598066 REVERSE LENGTH=343	LOC_Os03g01090.1	protein|peptidyl-prolyl cis-trans isomerase, cyclophilin type, putative, expressed	IMGA|Medtr5g013540.1	hypothetical protein chr5 4059949-4056014 F EGN_Mt100125 20111014	GO:0006457|protein folding GO:0006979|response to oxidative stress	GO:0003755|peptidyl-prolyl cis-trans isomerase activity	GO:0005737|cytoplasm
pt2_07960	A	A1S	Potri.001G150200	Potri.001G150200(AS)	POPTR_0003s03190	sp|Q9LTB8|CNBL9_ARATH	Calcineurin B-like protein 9 OS=Arabidopsis thaliana GN=CBL9 PE=1 SV=3	AT5G47100.1	| Symbols: CBL9, ATCBL9 | calcineurin B-like protein 9 | chr5:19129896-19131727 REVERSE LENGTH=213	LOC_Os10g41510.1	protein|calcineurin B, putative, expressed	IMGA|Medtr5g013560.1	Calcineurin B-like protein chr5 4070879-4074046 H EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0006950|response to stress GO:0009414|response to water deprivation GO:0010107|potassium ion import GO:0019722|calcium-mediated signaling	GO:0005509|calcium ion binding GO:0005515|protein binding	GO:0005737|cytoplasm GO:0005886|plasma membrane GO:0008287|protein serine/threonine phosphatase complex
pt2_07961	A	A1S	Potri.001G150100	Potri.001G150100(AS)	POPTR_0003s03200	sp|B3H672|PP317_ARATH	Pentatricopeptide repeat-containing protein At4g17616 OS=Arabidopsis thaliana GN=At4g17616 PE=2 SV=1	AT4G17616.1	| Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr4:9819608-9821632 FORWARD LENGTH=674	LOC_Os07g31310.1	protein|PPR repeat domain containing protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_07962	G	G1	NA	NA	POPTR_0003s03210	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07963	A	A1S	Potri.001G149900	Potri.001G149900(AS)	POPTR_0003s03220	sp|Q8RY73|DOM3Z_ARATH	Protein Dom3z homolog, chloroplastic OS=Arabidopsis thaliana GN=At4g17620 PE=1 SV=1	AT4G17620.1	| Symbols: | glycine-rich protein | chr4:9822005-9824859 FORWARD LENGTH=544	LOC_Os05g32580.1	protein|glycine-rich protein, putative, expressed	IMGA|Medtr5g013580.1	Dom3z-like protein chr5 4080213-4085690 F EGN_Mt100125 20111014	GO:0006302|double-strand break repair GO:0008150|biological_process GO:0010332|response to gamma radiation	GO:0003674|molecular_function	GO:0005829|cytosol GO:0009507|chloroplast
pt2_07964	A	A1S	Potri.001G149800	Potri.001G149800(AS)	POPTR_0003s03230	NA	NA	AT5G47090.1	| Symbols: | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2052, coiled-coil (InterPro:IPR018613); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:19127274-19128493 FORWARD LENGTH=310	LOC_Os06g04780.1	protein|coiled-coil domain-containing protein 97, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_07965	C	C1S	Potri.001G149700	Potri.001G149700(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07966	A	A1S	Potri.001G149600	Potri.001G149600(AS)	POPTR_0003s03250	sp|P40228|CSK2B_ARATH	Casein kinase II subunit beta OS=Arabidopsis thaliana GN=CKB1 PE=1 SV=1	AT5G47080.1	| Symbols: CKB1 | casein kinase II beta chain 1 | chr5:19124969-19126397 REVERSE LENGTH=287	LOC_Os10g41520.1	protein|casein kinase II subunit beta-4, putative, expressed	IMGA|Medtr5g013590.1	Casein kinase II subunit beta-4 chr5 4087278-4091049 F EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0071900|regulation of protein serine/threonine kinase activity	GO:0004674|protein serine/threonine kinase activity GO:0005515|protein binding GO:0019887|protein kinase regulator activity	GO:0005634|nucleus GO:0005956|protein kinase CK2 complex
pt2_07967	A	A1S	Potri.001G149600	Potri.001G149600(AS)	POPTR_0003s03250	sp|P40228|CSK2B_ARATH	Casein kinase II subunit beta OS=Arabidopsis thaliana GN=CKB1 PE=1 SV=1	AT5G47080.1	| Symbols: CKB1 | casein kinase II beta chain 1 | chr5:19124969-19126397 REVERSE LENGTH=287	LOC_Os10g41520.1	protein|casein kinase II subunit beta-4, putative, expressed	IMGA|Medtr5g013590.1	Casein kinase II subunit beta-4 chr5 4087278-4091049 F EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0071900|regulation of protein serine/threonine kinase activity	GO:0004674|protein serine/threonine kinase activity GO:0005515|protein binding GO:0019887|protein kinase regulator activity	GO:0005634|nucleus GO:0005956|protein kinase CK2 complex
pt2_07968	A	A1S	Potri.001G149500	Potri.001G149500(AS)	POPTR_0003s03260	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07969	A	A1S	Potri.001G149400	Potri.001G149400(AS)	POPTR_0003s03270	sp|Q8RY89|PI5K8_ARATH	Phosphatidylinositol 4-phosphate 5-kinase 8 OS=Arabidopsis thaliana GN=PIP5K8 PE=2 SV=1	AT4G17080.1	| Symbols: | Histone H3 K4-specific methyltransferase SET7/9 family protein | chr4:9601570-9603815 FORWARD LENGTH=513	LOC_Os10g41534.3	protein|ICE-like protease p20 domain containing protein, expressed	IMGA|Medtr5g058920.1	Phosphatidylinositol-4-phosphate 5-kinase chr5 23659553-23662290 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_07970	A	A2S	Potri.001G149300	Potri.001G149300(AS) Potri.003G085100(BS)	POPTR_0003s03280	sp|Q9ZRS8|RL37A_PSEMZ	60S ribosomal protein L37a OS=Pseudotsuga menziesii GN=RPL37A PE=3 SV=1	AT3G10950.1	| Symbols: | Zinc-binding ribosomal protein family protein | chr3:3423893-3424566 FORWARD LENGTH=92	LOC_Os05g48320.1	protein|60S ribosomal protein L37a, putative, expressed	NA	NA	GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005737|cytoplasm GO:0005829|cytosol GO:0005840|ribosome GO:0022625|cytosolic large ribosomal subunit
pt2_07971	A	A2S	Potri.001G149200	Potri.001G149200(AS) Potri.003G085200(DS)	POPTR_0003s03290	sp|Q944A9|NPS11_ARATH	Novel plant SNARE 11 OS=Arabidopsis thaliana GN=NPSN11 PE=1 SV=2	AT2G35190.1	| Symbols: NPSN11, ATNPSN11, NSPN11 | novel plant snare 11 | chr2:14831087-14832979 FORWARD LENGTH=265	LOC_Os06g50120.1	protein|novel plant SNARE 11, putative, expressed	NA	NA	GO:0006944|cellular membrane fusion GO:0016192|vesicle-mediated transport	GO:0005484|SNAP receptor activity GO:0008565|protein transporter activity	GO:0005886|plasma membrane GO:0009504|cell plate
pt2_07972	C	C1S	Potri.001G149200	Potri.001G149200(CS)	sp|Q944A9|NPS11_ARATH	Novel plant SNARE 11 OS=Arabidopsis thaliana GN=NPSN11 PE=1 SV=2	AT2G35190.1	| Symbols: NPSN11, ATNPSN11, NSPN11 | novel plant snare 11 | chr2:14831087-14832979 FORWARD LENGTH=265	LOC_Os06g50120.1	protein|novel plant SNARE 11, putative, expressed	NA	NA	GO:0006944|cellular membrane fusion GO:0016192|vesicle-mediated transport	GO:0005484|SNAP receptor activity GO:0008565|protein transporter activity	GO:0005886|plasma membrane GO:0009504|cell plate
pt2_07973	A	A1S	Potri.001G149100	Potri.001G149100(AS)	POPTR_0003s03310	sp|Q9LTC0|Y5707_ARATH	Probable receptor-like protein kinase At5g47070 OS=Arabidopsis thaliana GN=At5g47070 PE=1 SV=1	AT5G47070.1	| Symbols: | Protein kinase superfamily protein | chr5:19118683-19120528 REVERSE LENGTH=410	LOC_Os09g36320.1	protein|tyrosine protein kinase domain containing protein, putative, expressed	IMGA|Medtr5g013610.1	NAK-type protein kinase chr5 4102763-4105060 F EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_07974	A	A1S	Potri.001G149000	Potri.001G149000(AS)	POPTR_0003s03320	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07975	A	A1S	Potri.001G148900	Potri.001G148900(AS)	POPTR_0003s03330	sp|O23553|BAM3_ARATH	Beta-amylase 3, chloroplastic OS=Arabidopsis thaliana GN=BAM3 PE=1 SV=3	AT4G17090.1	| Symbols: CT-BMY, BAM3, BMY8 | chloroplast beta-amylase | chr4:9605266-9607250 REVERSE LENGTH=548	LOC_Os10g41550.1	protein|beta-amylase, putative, expressed	IMGA|Medtr5g013640.1	Beta-amylase chr5 4116154-4113637 E EGN_Mt100125 20111014	GO:0000024|maltose biosynthetic process GO:0000272|polysaccharide catabolic process GO:0005975|carbohydrate metabolic process GO:0005983|starch catabolic process GO:0009409|response to cold	GO:0003824|catalytic activity GO:0016161|beta-amylase activity GO:0043169|cation binding	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_07976	G	G1	NA	NA	POPTR_0003s03335	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07977	A	A1S	Potri.001G148800	Potri.001G148800(AS)	POPTR_0003s03360	sp|Q54LB8|VP13A_DICDI	Putative vacuolar protein sorting-associated protein 13A OS=Dictyostelium discoideum GN=vps13A PE=2 SV=1	AT4G17140.3	| Symbols: | pleckstrin homology (PH) domain-containing protein | chr4:9613617-9636618 REVERSE LENGTH=4219	LOC_Os02g27110.1	protein|expressed protein	IMGA|Medtr5g013780.1	Vacuolar protein sorting-associated protein 13A chr5 4187757-4241753 E EGN_Mt100125 20111014	GO:0007155|cell adhesion GO:0008150|biological_process GO:0010090|trichome morphogenesis GO:0045010|actin nucleation GO:0048765|root hair cell differentiation GO:0071555|cell wall organization	GO:0003674|molecular_function GO:0005543|phospholipid binding	GO:0005773|vacuole GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_07978	A	A1S	Potri.001G148800	Potri.001G148800(AS)	POPTR_0003s03360	sp|Q54LB8|VP13A_DICDI	Putative vacuolar protein sorting-associated protein 13A OS=Dictyostelium discoideum GN=vps13A PE=2 SV=1	AT4G17140.3	| Symbols: | pleckstrin homology (PH) domain-containing protein | chr4:9613617-9636618 REVERSE LENGTH=4219	LOC_Os02g27110.1	protein|expressed protein	IMGA|Medtr5g013780.1	Vacuolar protein sorting-associated protein 13A chr5 4187757-4241753 E EGN_Mt100125 20111014	GO:0007155|cell adhesion GO:0008150|biological_process GO:0010090|trichome morphogenesis GO:0045010|actin nucleation GO:0048765|root hair cell differentiation GO:0071555|cell wall organization	GO:0003674|molecular_function GO:0005543|phospholipid binding	GO:0005773|vacuole GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_07979	A	A1S	Potri.001G148800	Potri.001G148800(AS)	POPTR_0003s03360	sp|Q54LB8|VP13A_DICDI	Putative vacuolar protein sorting-associated protein 13A OS=Dictyostelium discoideum GN=vps13A PE=2 SV=1	AT4G17140.3	| Symbols: | pleckstrin homology (PH) domain-containing protein | chr4:9613617-9636618 REVERSE LENGTH=4219	LOC_Os02g27110.1	protein|expressed protein	IMGA|Medtr5g013780.1	Vacuolar protein sorting-associated protein 13A chr5 4187757-4241753 E EGN_Mt100125 20111014	GO:0007155|cell adhesion GO:0008150|biological_process GO:0010090|trichome morphogenesis GO:0045010|actin nucleation GO:0048765|root hair cell differentiation GO:0071555|cell wall organization	GO:0003674|molecular_function GO:0005543|phospholipid binding	GO:0005773|vacuole GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_07980	C	C1S	Potri.001G148800	Potri.001G148800(CS)	sp|Q54LB8|VP13A_DICDI	Putative vacuolar protein sorting-associated protein 13A OS=Dictyostelium discoideum GN=vps13A PE=2 SV=1	AT4G17140.3	| Symbols: | pleckstrin homology (PH) domain-containing protein | chr4:9613617-9636618 REVERSE LENGTH=4219	LOC_Os02g27110.1	protein|expressed protein	IMGA|Medtr5g013780.1	Vacuolar protein sorting-associated protein 13A chr5 4187757-4241753 E EGN_Mt100125 20111014	GO:0007155|cell adhesion GO:0008150|biological_process GO:0010090|trichome morphogenesis GO:0045010|actin nucleation GO:0048765|root hair cell differentiation GO:0071555|cell wall organization	GO:0003674|molecular_function GO:0005543|phospholipid binding	GO:0005773|vacuole GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_07981	G	G1	NA	NA	POPTR_0003s03390	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07982	A	A1S	Potri.001G148700	Potri.001G148700(AS)	POPTR_0003s03400	NA	NA	AT4G17670.1	| Symbols: | Protein of unknown function (DUF581) | chr4:9833948-9834663 REVERSE LENGTH=159	LOC_Os04g49660.1	protein|DUF581 domain containing protein, expressed	IMGA|Medtr5g013770.1	hypothetical protein chr5 4179788-4180781 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07983	A	A1S	Potri.001G148600	Potri.001G148600(AS)	POPTR_0003s03410	NA	NA	AT1G32740.1	| Symbols: | SBP (S-ribonuclease binding protein) family protein | chr1:11844883-11846082 FORWARD LENGTH=312	LOC_Os02g46220.1	protein|expressed protein	IMGA|Medtr5g013690.1	Baculoviral IAP repeat-containing protein chr5 4147917-4149745 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0008270|zinc ion binding	GO:0005575|cellular_component
pt2_07984	C	C1A	Potri.016G123400	Potri.016G123400(CA)	NA	NA	NA	NA	NA	NA	IMGA|Medtr5g058860.1	Nodulation signaling pathway chr5 23641413-23642933 H EGN_Mt100125 20111014	GO:0009062|fatty acid catabolic process GO:0009651|response to salt stress GO:0009686|gibberellin biosynthetic process GO:0009723|response to ethylene stimulus GO:0009737|response to abscisic acid stimulus GO:0009739|response to gibberellin stimulus GO:0009740|gibberellic acid mediated signaling pathway GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009938|negative regulation of gibberellic acid mediated signaling pathway GO:0010029|regulation of seed germination GO:0010162|seed dormancy process GO:0010187|negative regulation of seed germination GO:0010325|raffinose family oligosaccharide biosynthetic process GO:0042538|hyperosmotic salinity response GO:0048444|floral organ morphogenesis GO:0048608|reproductive structure development GO:2000033|regulation of seed dormancy process GO:2000377|regulation of reactive oxygen species metabolic process	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_07985	G	G1	NA	NA	POPTR_0003s03450	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07986	A	A2S	Potri.003G046800	Potri.003G046800(AS) Potri.004G236500(DS)	POPTR_0003s03650	sp|Q9C6W5|AB14G_ARATH	ABC transporter G family member 14 OS=Arabidopsis thaliana GN=ABCG14 PE=2 SV=1	AT1G31770.1	| Symbols: ABCG14 | ATP-binding cassette 14 | chr1:11375252-11377644 REVERSE LENGTH=648	LOC_Os08g07010.1	protein|ABC-2 type transporter domain containing protein, expressed	IMGA|Medtr5g025470.1	ABC transporter-like protein chr5 10080322-10082815 E EGN_Mt100125 20111014	NA	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0016020|membrane
pt2_07987	R	R	NA	NA	POPTR_0003s03660	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07988	A	A1S	Potri.003G046700	Potri.003G046700(AS)	POPTR_0003s03670	sp|Q9FIW5|NAC94_ARATH	Putative NAC domain-containing protein 94 OS=Arabidopsis thaliana GN=ANAC094 PE=2 SV=1	AT2G02450.1	| Symbols: ANAC034, ANAC035, LOV1, NAC035 | NAC domain containing protein 35 | chr2:648044-650649 FORWARD LENGTH=379	LOC_Os01g66490.1	protein|no apical meristem protein, putative, expressed	IMGA|Medtr5g040420.1	NAC domain protein chr5 17361958-17364183 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0007275|multicellular organismal development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_07989	A	A1S	Potri.003G046600	Potri.003G046600(AS)	POPTR_0003s03680	NA	NA	AT2G02410.1	| Symbols: | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF901 (InterPro:IPR010298); Has 1151 Blast hits to 1151 proteins in 597 species: Archae - 0; Bacteria - 1105; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). | chr2:632713-634613 FORWARD LENGTH=308	LOC_Os03g62610.1	protein|RNA-binding protein containing a PIN domain, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_07990	A	A1S	Potri.003G046600	Potri.003G046600(AS)	POPTR_0003s03680	NA	NA	AT2G02410.1	| Symbols: | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF901 (InterPro:IPR010298); Has 1151 Blast hits to 1151 proteins in 597 species: Archae - 0; Bacteria - 1105; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). | chr2:632713-634613 FORWARD LENGTH=308	LOC_Os03g62610.1	protein|RNA-binding protein containing a PIN domain, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_07991	A	A1S	Potri.003G046600	Potri.003G046600(AS)	POPTR_0003s03680	NA	NA	AT2G02410.1	| Symbols: | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF901 (InterPro:IPR010298); Has 1151 Blast hits to 1151 proteins in 597 species: Archae - 0; Bacteria - 1105; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). | chr2:632713-634613 FORWARD LENGTH=308	LOC_Os03g62610.1	protein|RNA-binding protein containing a PIN domain, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_07992	A	A1S	Potri.003G046600	Potri.003G046600(AS)	POPTR_0003s03680	NA	NA	AT2G02410.1	| Symbols: | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF901 (InterPro:IPR010298); Has 1151 Blast hits to 1151 proteins in 597 species: Archae - 0; Bacteria - 1105; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). | chr2:632713-634613 FORWARD LENGTH=308	LOC_Os03g62610.1	protein|RNA-binding protein containing a PIN domain, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_07993	A	A1S	Potri.003G046500	Potri.003G046500(AS)	POPTR_0003s03690	sp|Q9LT96|Y5977_ARATH	Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1	AT5G49760.1	| Symbols: | Leucine-rich repeat protein kinase family protein | chr5:20216679-20221052 FORWARD LENGTH=953	LOC_Os12g10740.1	protein|leucine-rich repeat family protein, putative, expressed	IMGA|Medtr5g075650.1	Protein kinase-like protein chr5 31198721-31190078 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006569|tryptophan catabolic process GO:0009684|indoleacetic acid biosynthetic process GO:0030003|cellular cation homeostasis GO:0044242|cellular lipid catabolic process GO:0070838|divalent metal ion transport	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005576|extracellular region GO:0005773|vacuole GO:0005886|plasma membrane
pt2_07994	A	A1S	Potri.003G046400	Potri.003G046400(AS)	POPTR_0003s03700	sp|Q9LT96|Y5977_ARATH	Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1	AT1G79620.1	| Symbols: | Leucine-rich repeat protein kinase family protein | chr1:29957633-29962174 REVERSE LENGTH=971	LOC_Os12g10740.1	protein|leucine-rich repeat family protein, putative, expressed	IMGA|Medtr1g039220.1	Receptor protein kinase-like protein chr1 10530698-10534277 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway GO:0010413|glucuronoxylan metabolic process GO:0044036|cell wall macromolecule metabolic process GO:0045492|xylan biosynthetic process	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005576|extracellular region
pt2_07995	A	A1S	Potri.003G046300	Potri.003G046300(AS)	POPTR_0003s03710	NA	NA	NA	NA	LOC_Os07g46400.1	protein|expressed protein	NA	NA	NA	NA	NA
pt2_07996	A	A1S	Potri.003G046200	Potri.003G046200(AS)	POPTR_0003s03720	sp|Q8R116|NOTUM_MOUSE	Protein notum homolog OS=Mus musculus GN=Notum PE=2 SV=2	AT4G19410.1	| Symbols: | Pectinacetylesterase family protein | chr4:10582188-10584766 REVERSE LENGTH=391	LOC_Os04g51340.1	protein|pectinacetylesterase domain containing protein, expressed	IMGA|Medtr5g042650.1	Notum-like protein chr5 18345739-18349541 H EGN_Mt100125 20111014	GO:0007010|cytoskeleton organization GO:0008150|biological_process GO:0016126|sterol biosynthetic process	GO:0003779|actin binding GO:0004091|carboxylesterase activity	GO:0005576|extracellular region GO:0005618|cell wall GO:0005829|cytosol GO:0005886|plasma membrane GO:0009505|plant-type cell wall GO:0009506|plasmodesma GO:0015629|actin cytoskeleton GO:0016020|membrane
pt2_07997	A	A1S	Potri.003G046100	Potri.003G046100(AS)	POPTR_0003s03730	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07998	A	A1A	Potri.003G046100	Potri.003G046100(AA)	POPTR_0003s03740	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_07999	A	A1S	Potri.003G046000	Potri.003G046000(AS)	POPTR_0003s03750	NA	NA	AT5G45320.1	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: inflorescence meristem, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G26350.1); Has 253 Blast hits to 253 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 253; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:18362354-18363053 REVERSE LENGTH=198	LOC_Os06g49650.1	protein|harpin-induced protein 1 domain containing protein, expressed	IMGA|Medtr5g025760.1	hypothetical protein chr5 10249751-10249050 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_08000	A	A1S	Potri.003G045800	Potri.003G045800(AS)	POPTR_0003s03950	sp|Q9FVX2|PP129_ARATH	Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidopsis thaliana GN=At1g77360 PE=2 SV=2	AT1G77360.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:29071983-29073536 REVERSE LENGTH=517	LOC_Os04g44030.1	protein|PPR repeat domain containing protein, putative, expressed	IMGA|Medtr1g108270.1	Pentatricopeptide repeat-containing protein chr1 31811104-31809581 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_08001	A	A1S	Potri.003G045700	Potri.003G045700(AS)	POPTR_0003s03960	sp|Q8LPJ4|AB2E_ARATH	ABC transporter E family member 2 OS=Arabidopsis thaliana GN=ABCE2 PE=2 SV=1	AT4G19210.1	| Symbols: ATRLI2, RLI2 | RNAse l inhibitor protein 2 | chr4:10501906-10504776 FORWARD LENGTH=605	LOC_Os11g34350.1	protein|ATP-binding cassette sub-family E member 1, putative, expressed	IMGA|Medtr1g114170.1	RNase L inhibitor-like protein chr1 33048416-33052831 H EGN_Mt100125 20111014	GO:0051604|protein maturation	GO:0000166|nucleotide binding GO:0005215|transporter activity GO:0005524|ATP binding GO:0009055|electron carrier activity GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0051536|iron-sulfur cluster binding	NA
pt2_08002	A	A1S	Potri.003G045600	Potri.003G045600(AS)	POPTR_0003s03970	sp|P59278|Y1745_ARATH	Uncharacterized protein At1g51745 OS=Arabidopsis thaliana GN=At1g51745 PE=2 SV=2	AT1G51745.1	| Symbols: | Tudor/PWWP/MBT superfamily protein | chr1:19192055-19194375 FORWARD LENGTH=563	LOC_Os01g37790.1	protein|expressed protein	IMGA|Medtr5g007980.1	hypothetical protein chr5 1385906-1380423 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_08003	A	A2S	Potri.T165500	Potri.T165500(AS) Potri.003G045500(AS)	POPTR_0003s03980	sp|O82204|RL281_ARATH	60S ribosomal protein L28-1 OS=Arabidopsis thaliana GN=RPL28A PE=1 SV=1	AT2G19730.3	| Symbols: | Ribosomal L28e protein family | chr2:8511752-8512995 FORWARD LENGTH=143	LOC_Os02g57540.1	protein|60S ribosomal protein L28-1, putative, expressed	NA	NA	GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005618|cell wall GO:0005622|intracellular GO:0005840|ribosome GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0009507|chloroplast GO:0022625|cytosolic large ribosomal subunit GO:0022626|cytosolic ribosome
pt2_08004	A	A2S	Potri.003G045300	Potri.003G045300(AS) Potri.001G194400(BS)	POPTR_0003s04000	sp|O96552|CHMP1_DICDI	Charged multivesicular body protein 1 OS=Dictyostelium discoideum GN=chmp1 PE=3 SV=1	AT1G73030.1	| Symbols: VPS46.2, CHMP1A | SNF7 family protein | chr1:27473938-27474848 FORWARD LENGTH=203	LOC_Os06g43590.3	protein|SNF7 domain containing protein, putative, expressed	NA	NA	GO:0000578|embryonic axis specification GO:0009790|embryo development GO:0015031|protein transport GO:0016192|vesicle-mediated transport GO:0032509|endosome transport via multivesicular body sorting pathway GO:0040007|growth	NA	NA
pt2_08005	A	A1S	Potri.003G045200	Potri.003G045200(AS)	POPTR_0003s04010	sp|O04373|ILL4_ARATH	IAA-amino acid hydrolase ILR1-like 4 OS=Arabidopsis thaliana GN=ILL4 PE=1 SV=2	AT1G51760.1	| Symbols: IAR3, JR3 | peptidase M20/M25/M40 family protein | chr1:19199562-19201424 FORWARD LENGTH=440	LOC_Os01g37960.1	protein|hydrolase, putative, expressed	NA	NA	GO:0006508|proteolysis GO:0008152|metabolic process GO:0009611|response to wounding	GO:0008237|metallopeptidase activity GO:0010179|IAA-Ala conjugate hydrolase activity GO:0016787|hydrolase activity	GO:0005783|endoplasmic reticulum GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_08006	A	A1S	Potri.003G045100	Potri.003G045100(AS)	POPTR_0003s04015	NA	NA	NA	NA	LOC_Os09g03910.1	protein|retrotransposon protein, putative, unclassified, expressed	NA	NA	NA	NA	NA
pt2_08007	G	G1	NA	NA	POPTR_0003s04030	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_08008	C	C1S	Potri.003G045000	Potri.003G045000(CS)	sp|O82804|ELF3_ARATH	Protein EARLY FLOWERING 3 OS=Arabidopsis thaliana GN=ELF3 PE=1 SV=1	AT3G21320.1	| Symbols: | BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT2G25930.1); Has 63 Blast hits to 58 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr3:7499408-7501312 REVERSE LENGTH=540	LOC_Os01g38530.1	protein|ELF3 protein, putative, expressed	IMGA|contig_238605_1.1	Early flowering contig_238605 1838-5747 H PREDN 20111014	GO:0007623|circadian rhythm GO:0009409|response to cold GO:0009585|red, far-red light phototransduction GO:0009649|entrainment of circadian clock GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009826|unidimensional cell growth GO:0009909|regulation of flower development GO:0010031|circumnutation GO:0010119|regulation of stomatal movement GO:0048573|photoperiodism, flowering	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008022|protein C-terminus binding	GO:0005634|nucleus
pt2_08009	A	A1S	Potri.003G044900	Potri.003G044900(AS)	POPTR_0003s04050	sp|P09122|DPO3X_BACSU	DNA polymerase III subunit gamma/tau OS=Bacillus subtilis (strain 168) GN=dnaX PE=3 SV=3	AT2G02480.1	| Symbols: STI | AAA-type ATPase family protein | chr2:661093-665337 FORWARD LENGTH=1218	LOC_Os12g10670.1	protein|AAA-type ATPase family protein, putative, expressed	IMGA|AC235753_15.1	DNA polymerase III subunit gamma/tau AC235753.2 53523-56883 H EGN_Mt100125 20111014	GO:0003002|regionalization GO:0006260|DNA replication GO:0007155|cell adhesion GO:0009887|organ morphogenesis GO:0009888|tissue development GO:0010014|meristem initiation GO:0010026|trichome differentiation GO:0010090|trichome morphogenesis GO:0010091|trichome branching GO:0010228|vegetative to reproductive phase transition of meristem GO:0010638|positive regulation of organelle organization GO:0016049|cell growth GO:0016926|protein desumoylation GO:0033043|regulation of organelle organization GO:0033044|regulation of chromosome organization GO:0045010|actin nucleation GO:0045595|regulation of cell differentiation GO:0048449|floral organ formation GO:0048589|developmental growth GO:0048765|root hair cell differentiation GO:0050665|hydrogen peroxide biosynthetic process GO:0071555|cell wall organization	GO:0003677|DNA binding GO:0003887|DNA-directed DNA polymerase activity GO:0005524|ATP binding	GO:0005634|nucleus GO:0005886|plasma membrane GO:0009360|DNA polymerase III complex
pt2_08010	A	A1S	Potri.003G044800	Potri.003G044800(AS)	POPTR_0003s04060	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_08011	A	A2S	Potri.003G044700	Potri.003G044700(AS) Potri.004G230500(DS)	POPTR_0003s04070	sp|Q40359|ALFIN_MEDSA	PHD finger protein Alfin1 OS=Medicago sativa GN=ALFIN-1 PE=1 SV=1	AT2G02470.1	| Symbols: AL6 | alfin-like 6 | chr2:652837-654621 FORWARD LENGTH=256	LOC_Os11g14010.1	protein|PHD finger protein, putative, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0008270|zinc ion binding GO:0035064|methylated histone residue binding	GO:0005634|nucleus GO:0005829|cytosol
pt2_08012	C	C1A	Potri.003G044700	Potri.003G044700(CA)	sp|Q40359|ALFIN_MEDSA	PHD finger protein Alfin1 OS=Medicago sativa GN=ALFIN-1 PE=1 SV=1	AT2G02470.1	| Symbols: AL6 | alfin-like 6 | chr2:652837-654621 FORWARD LENGTH=256	LOC_Os11g14010.1	protein|PHD finger protein, putative, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0008270|zinc ion binding GO:0035064|methylated histone residue binding	GO:0005634|nucleus GO:0005829|cytosol
pt2_08013	G	G1	NA	NA	POPTR_0003s04090	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_08014	A	A1S	Potri.003G044400	Potri.003G044400(AS)	POPTR_0003s04100	NA	NA	AT5G57060.2	| Symbols: | BEST Arabidopsis thaliana protein match is: Ribosomal protein L18ae family (TAIR:AT4G26060.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr5:23091072-23091796 FORWARD LENGTH=110	LOC_Os01g08814.1	protein|expressed protein	NA	NA	GO:0006412|translation GO:0019835|cytolysis GO:0050829|defense response to Gram-negative bacterium	GO:0003674|molecular_function GO:0003735|structural constituent of ribosome	GO:0005739|mitochondrion GO:0005840|ribosome GO:0016021|integral to membrane
pt2_08015	C	C1S	Potri.003G044300	Potri.003G044300(CS)	NA	NA	AT5G28950.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 448 Blast hits to 446 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 21; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:10992505-10993435 FORWARD LENGTH=148	LOC_Os06g38920.1	protein|transposon protein, putative, CACTA, En/Spm sub-class, expressed	IMGA|Medtr5g054570.1	PIF-like protein chr5 21936286-21937344 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_08016	A	A1S	Potri.003G044200	Potri.003G044200(AS)	POPTR_0003s04120	sp|Q9CAJ0|P2C16_ARATH	Protein phosphatase 2C 16 OS=Arabidopsis thaliana GN=HAB1 PE=1 SV=1	AT1G72770.3	| Symbols: HAB1 | homology to ABI1 | chr1:27390998-27392851 FORWARD LENGTH=511	LOC_Os01g40094.1	protein|protein phosphatase 2C, putative, expressed	IMGA|contig_240289_1.1	Protein phosphatase 2C contig_240289 189-2272 E PREDN 20111014	GO:0006470|protein dephosphorylation GO:0009610|response to symbiotic fungus GO:0010029|regulation of seed germination	GO:0004722|protein serine/threonine phosphatase activity GO:0005515|protein binding	GO:0008287|protein serine/threonine phosphatase complex
pt2_08017	A	A2S	Potri.003G044100	Potri.003G044100(AS) Potri.001G198100(DS)	POPTR_0003s04130	NA	NA	AT1G17530.1	| Symbols: ATTIM23-1, TIM23-1 | translocase of inner mitochondrial membrane 23 | chr1:6027723-6028286 FORWARD LENGTH=187	LOC_Os03g02390.1	protein|mitochondrial import inner membrane translocase subunit Tim17, putative, expressed	IMGA|Medtr1g081230.1	Mitochondrial import inner membrane translocase subunit tim23 chr1 20688360-20688917 H EGN_Mt100125 20111014	GO:0006626|protein targeting to mitochondrion GO:0006869|lipid transport GO:0006886|intracellular protein transport GO:0006891|intra-Golgi vesicle-mediated transport GO:0010351|lithium ion transport GO:0015031|protein transport GO:0016558|protein import into peroxisome matrix	GO:0015450|P-P-bond-hydrolysis-driven protein transmembrane transporter activity	GO:0005622|intracellular GO:0005743|mitochondrial inner membrane GO:0005744|mitochondrial inner membrane presequence translocase complex
pt2_08018	G	G1	NA	NA	POPTR_0003s04135	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_08019	A	A1S	Potri.003G043900	Potri.003G043900(AS)	POPTR_0003s04140	sp|Q8RWN9|OPD22_ARATH	Dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvate dehydrogenase complex, mitochondrial OS=Arabidopsis thaliana GN=At3g13930 PE=1 SV=2	AT3G13930.1	| Symbols: | Dihydrolipoamide acetyltransferase, long form protein | chr3:4596240-4600143 FORWARD LENGTH=539	LOC_Os06g01630.1	protein|2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed	IMGA|Medtr5g093300.1	Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex chr5 39691667-39698807 F EGN_Mt100125 20111014	GO:0006090|pyruvate metabolic process GO:0008152|metabolic process GO:0046686|response to cadmium ion	GO:0004742|dihydrolipoyllysine-residue acetyltransferase activity GO:0005507|copper ion binding GO:0016746|transferase activity, transferring acyl groups	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009941|chloroplast envelope GO:0045254|pyruvate dehydrogenase complex
pt2_08020	A	A1S	Potri.003G043800	Potri.003G043800(AS)	POPTR_0003s04145	NA	NA	AT5G28780.1	| Symbols: | PIF1 helicase | chr5:10812907-10814173 REVERSE LENGTH=337	LOC_Os01g14770.1	protein|retrotransposon protein, putative, unclassified, expressed	IMGA|Medtr5g027410.1	ATP-dependent DNA helicase PIF1 chr5 11142764-11148044 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_08021	A	A1S	Potri.003G043700	Potri.003G043700(AS)	POPTR_0003s04150	sp|P41381|IF4A8_TOBAC	Eukaryotic initiation factor 4A-8 OS=Nicotiana tabacum PE=2 SV=1	AT3G13920.1	| Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation initiation factor 4A1 | chr3:4592635-4594128 REVERSE LENGTH=412	LOC_Os06g48750.2	protein|DEAD-box ATP-dependent RNA helicase, putative, expressed	IMGA|Medtr1g012420.1	DEAD-box ATP-dependent RNA helicase chr1 2906253-2898397 F EGN_Mt100125 20111014	GO:0006094|gluconeogenesis GO:0006096|glycolysis GO:0006413|translational initiation GO:0009651|response to salt stress GO:0046686|response to cadmium ion	GO:0003676|nucleic acid binding GO:0003743|translation initiation factor activity GO:0004386|helicase activity GO:0005515|protein binding GO:0005524|ATP binding GO:0008026|ATP-dependent helicase activity	GO:0005618|cell wall GO:0005634|nucleus GO:0005730|nucleolus GO:0005737|cytoplasm GO:0005829|cytosol GO:0009506|plasmodesma GO:0016020|membrane GO:0048046|apoplast
pt2_08022	A	A1S	Potri.003G043600	Potri.003G043600(AS)	POPTR_0003s04160	NA	NA	AT5G11970.1	| Symbols: | Protein of unknown function (DUF3511) | chr5:3863289-3863606 REVERSE LENGTH=105	LOC_Os05g28840.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005886|plasma membrane
pt2_08023	A	A1S	Potri.003G043500	Potri.003G043500(AS)	POPTR_0003s04170	sp|P42158|KC1D_ARATH	Casein kinase I isoform delta-like OS=Arabidopsis thaliana GN=At4g26100 PE=2 SV=2	AT1G72710.1	| Symbols: CKL2 | casein kinase 1-like protein 2 | chr1:27372553-27376178 FORWARD LENGTH=465	LOC_Os01g51200.1	protein|CK1_CaseinKinase_1.3 - CK1 includes the casein kinase 1 kinases, expressed	IMGA|Medtr1g042430.1	Casein kinase chr1 12130628-12134366 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006487|protein N-linked glycosylation GO:0044036|cell wall macromolecule metabolic process	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_08024	A	A1S	Potri.003G043300	Potri.003G043300(AS)	POPTR_0003s04180	sp|Q9LNQ4|ALA4_ARATH	Putative phospholipid-transporting ATPase 4 OS=Arabidopsis thaliana GN=ALA4 PE=1 SV=2	AT1G17500.1	| Symbols: | ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein | chr1:6018757-6023201 FORWARD LENGTH=1216	LOC_Os06g36990.1	protein|phospholipid-transporting ATPase 4, putative, expressed	IMGA|Medtr5g037210.1	Phospholipid-translocating P-type ATPase flippase family protein chr5 15827138-15809797 E EGN_Mt100125 20111014	GO:0006812|cation transport GO:0006888|ER to Golgi vesicle-mediated transport GO:0008152|metabolic process GO:0009744|response to sucrose stimulus GO:0009749|response to glucose stimulus GO:0009750|response to fructose stimulus GO:0015914|phospholipid transport GO:0043090|amino acid import	GO:0000166|nucleotide binding GO:0000287|magnesium ion binding GO:0003824|catalytic activity GO:0004012|phospholipid-translocating ATPase activity GO:0005524|ATP binding GO:0015662|ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism GO:0016820|hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances GO:0046872|metal ion binding	GO:0005886|plasma membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_08025	A	A1S	Potri.003G043300	Potri.003G043300(AS)	POPTR_0003s04180	sp|Q9LNQ4|ALA4_ARATH	Putative phospholipid-transporting ATPase 4 OS=Arabidopsis thaliana GN=ALA4 PE=1 SV=2	AT1G17500.1	| Symbols: | ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein | chr1:6018757-6023201 FORWARD LENGTH=1216	LOC_Os06g36990.1	protein|phospholipid-transporting ATPase 4, putative, expressed	IMGA|Medtr5g037210.1	Phospholipid-translocating P-type ATPase flippase family protein chr5 15827138-15809797 E EGN_Mt100125 20111014	GO:0006812|cation transport GO:0006888|ER to Golgi vesicle-mediated transport GO:0008152|metabolic process GO:0009744|response to sucrose stimulus GO:0009749|response to glucose stimulus GO:0009750|response to fructose stimulus GO:0015914|phospholipid transport GO:0043090|amino acid import	GO:0000166|nucleotide binding GO:0000287|magnesium ion binding GO:0003824|catalytic activity GO:0004012|phospholipid-translocating ATPase activity GO:0005524|ATP binding GO:0015662|ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism GO:0016820|hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances GO:0046872|metal ion binding	GO:0005886|plasma membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_08026	A	A1S	Potri.003G043300	Potri.003G043300(AS)	POPTR_0003s04180	sp|Q9LNQ4|ALA4_ARATH	Putative phospholipid-transporting ATPase 4 OS=Arabidopsis thaliana GN=ALA4 PE=1 SV=2	AT1G17500.1	| Symbols: | ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein | chr1:6018757-6023201 FORWARD LENGTH=1216	LOC_Os06g36990.1	protein|phospholipid-transporting ATPase 4, putative, expressed	IMGA|Medtr5g037210.1	Phospholipid-translocating P-type ATPase flippase family protein chr5 15827138-15809797 E EGN_Mt100125 20111014	GO:0006812|cation transport GO:0006888|ER to Golgi vesicle-mediated transport GO:0008152|metabolic process GO:0009744|response to sucrose stimulus GO:0009749|response to glucose stimulus GO:0009750|response to fructose stimulus GO:0015914|phospholipid transport GO:0043090|amino acid import	GO:0000166|nucleotide binding GO:0000287|magnesium ion binding GO:0003824|catalytic activity GO:0004012|phospholipid-translocating ATPase activity GO:0005524|ATP binding GO:0015662|ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism GO:0016820|hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances GO:0046872|metal ion binding	GO:0005886|plasma membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_08027	A	A1S	Potri.003G043400	Potri.003G043400(AS)	POPTR_0003s04190	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_08028	A	A1S	Potri.003G043200	Potri.003G043200(AS)	POPTR_0003s04200	sp|Q84LG4|COPZ2_ARATH	Coatomer subunit zeta-2 OS=Arabidopsis thaliana GN=At3g09800 PE=2 SV=1	AT1G60970.1	| Symbols: | SNARE-like superfamily protein | chr1:22448008-22449387 REVERSE LENGTH=177	LOC_Os02g21250.2	protein|clathrin adaptor complex small chain domain containing protein, expressed	NA	NA	GO:0006457|protein folding GO:0006810|transport GO:0006886|intracellular protein transport GO:0009408|response to heat GO:0009644|response to high light intensity GO:0034976|response to endoplasmic reticulum stress GO:0042542|response to hydrogen peroxide GO:0045893|positive regulation of transcription, DNA-dependent	NA	GO:0030125|clathrin vesicle coat
pt2_08029	A	A2S	Potri.003G042400	Potri.003G042400(AS) Potri.003G043100(AS)	POPTR_0003s04210	NA	NA	AT1G14560.1	| Symbols: | Mitochondrial substrate carrier family protein | chr1:4981300-4983082 FORWARD LENGTH=331	NA	NA	NA	NA	GO:0006810|transport GO:0006839|mitochondrial transport GO:0055085|transmembrane transport	GO:0005215|transporter activity	GO:0005739|mitochondrion GO:0005743|mitochondrial inner membrane
pt2_08030	A	A2S	Potri.003G042300	Potri.003G042300(AS) Potri.003G043000(AS)	POPTR_0003s04220	sp|C4B8C4|EPFL3_ARATH	EPIDERMAL PATTERNING FACTOR-like protein 3 OS=Arabidopsis thaliana GN=EPFL3 PE=3 SV=1	AT3G13898.1	| Symbols: | unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1). | chr3:4584011-4584334 FORWARD LENGTH=107	LOC_Os02g51950.1	protein|expressed protein	IMGA|contig_83747_1.1	EPIDERMAL PATTERNING FACTOR-like protein contig_83747 1149-573 H PREDN 20111014	NA	NA	GO:0005634|nucleus
pt2_08031	A	A3S	Potri.003G042200	Potri.003G042200(AS) Potri.003G042800(AS) Potri.003G042900(AS)	POPTR_0003s04230	NA	NA	AT2G26190.1	| Symbols: | calmodulin-binding family protein | chr2:11147901-11150082 REVERSE LENGTH=532	LOC_Os03g25760.1	protein|calmodulin-binding protein, putative, expressed	NA	NA	GO:0006499|N-terminal protein myristoylation	GO:0005516|calmodulin binding	NA
pt2_08032	A	A1S	Potri.003G042700	Potri.003G042700(AS)	POPTR_0003s04240	sp|Q9SF32|IQD1_ARATH	Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana GN=IQD1 PE=1 SV=1	AT1G72670.1	| Symbols: iqd8 | IQ-domain 8 | chr1:27356898-27358657 REVERSE LENGTH=414	LOC_Os01g09790.1	protein|IQ calmodulin-binding motif domain containing protein, expressed	IMGA|Medtr1g095740.1	IQ domain-containing protein chr1 27488331-27490594 H EGN_Mt100125 20111014	GO:0000226|microtubule cytoskeleton organization GO:0008150|biological_process	GO:0005516|calmodulin binding	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_08033	C	C2S	Potri.003G041500	Potri.003G041500(CS) Potri.003G042600(CS)	sp|O64705|PP184_ARATH	Pentatricopeptide repeat-containing protein At2g34400 OS=Arabidopsis thaliana GN=PCMP-E23 PE=2 SV=2	AT2G34400.1	| Symbols: | Pentatricopeptide repeat (PPR-like) superfamily protein | chr2:14516226-14518186 FORWARD LENGTH=621	LOC_Os05g24150.1	protein|tetratricopeptide-like helical, putative, expressed	IMGA|Medtr5g043920.1	Pentatricopeptide repeat-containing protein chr5 18880006-18878212 E EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_08034	B	B4S	Potri.003G041700	Potri.003G041700(BS) Potri.003G042500(BS) Potri.003G041400(DS) Potri.018G144300(DS)	POPTR_0003s04260	sp|Q9ZPS9|BRL2_ARATH	Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL2 PE=1 SV=1	AT1G74190.1	| Symbols: AtRLP15, RLP15 | receptor like protein 15 | chr1:27902590-27906158 REVERSE LENGTH=965	LOC_Os04g55440.1	protein|Cf-4A protein, putative, expressed	IMGA|Medtr5g086630.1	Receptor-like protein kinase chr5 36425874-36422848 H EGN_Mt100125 20111014	NA	NA	GO:0005886|plasma membrane
pt2_08035	A	A1S	Potri.003G041500	Potri.003G041500(AS)	POPTR_0003s04280	sp|O64705|PP184_ARATH	Pentatricopeptide repeat-containing protein At2g34400 OS=Arabidopsis thaliana GN=PCMP-E23 PE=2 SV=2	AT2G34400.1	| Symbols: | Pentatricopeptide repeat (PPR-like) superfamily protein | chr2:14516226-14518186 FORWARD LENGTH=621	LOC_Os05g24150.1	protein|tetratricopeptide-like helical, putative, expressed	IMGA|Medtr5g043920.1	Pentatricopeptide repeat-containing protein chr5 18880006-18878212 E EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_08036	B	B2S	Potri.003G041900	Potri.003G041900(BS) Potri.003G041400(BS)	POPTR_0003s04290	sp|Q9C9H7|RLP12_ARATH	Receptor-like protein 12 OS=Arabidopsis thaliana GN=RLP12 PE=2 SV=2	AT1G74190.1	| Symbols: AtRLP15, RLP15 | receptor like protein 15 | chr1:27902590-27906158 REVERSE LENGTH=965	LOC_Os04g55440.1	protein|Cf-4A protein, putative, expressed	IMGA|Medtr5g069580.1	Receptor protein kinase-like protein chr5 28520745-28517219 H EGN_Mt100125 20111014	GO:0007165|signal transduction	NA	GO:0009507|chloroplast
pt2_08037	A	A1S	Potri.003G041300	Potri.003G041300(AS)	POPTR_0003s04300	sp|Q9SZW4|HMA2_ARATH	Cadmium/zinc-transporting ATPase HMA2 OS=Arabidopsis thaliana GN=HMA2 PE=2 SV=1	AT4G30110.1	| Symbols: HMA2, ATHMA2 | heavy metal atpase 2 | chr4:14720253-14724577 REVERSE LENGTH=951	LOC_Os07g12900.1	protein|cadmium/zinc-transporting ATPase, putative, expressed	IMGA|AC229724_1041.1	Zn/Cd P(IB)-type ATPase AC229724.12 145068-140270 H EGN_Mt100125 20111014	GO:0006754|ATP biosynthetic process GO:0006812|cation transport GO:0008152|metabolic process GO:0030001|metal ion transport GO:0055069|zinc ion homeostasis	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0005524|ATP binding GO:0015434|cadmium-transporting ATPase activity GO:0015662|ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism GO:0016818|hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides GO:0046872|metal ion binding GO:0046873|metal ion transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_08038	A	A1S	Potri.003G041100	Potri.003G041100(AS)	POPTR_0003s04310	NA	NA	AT3G13882.1	| Symbols: | Ribosomal protein L34 | chr3:4574600-4575852 FORWARD LENGTH=147	LOC_Os01g39010.1	protein|50S ribosomal protein, putative, expressed	NA	NA	GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005739|mitochondrion GO:0005840|ribosome
pt2_08039	A	A2S	Potri.003G041000	Potri.003G041000(AS) Potri.001G196800(DS)	POPTR_0003s04320	sp|Q5HWH7|SURE_CAMJR	5'-nucleotidase SurE OS=Campylobacter jejuni (strain RM1221) GN=surE PE=3 SV=1	AT1G72880.1	| Symbols: | Survival protein SurE-like phosphatase/nucleotidase | chr1:27423678-27425928 REVERSE LENGTH=385	LOC_Os01g51280.1	protein|5-nucleotidase surE, putative, expressed	IMGA|Medtr5g006290.1	5'-nucleotidase surE chr5 612036-607992 F EGN_Mt100125 20111014	NA	GO:0003993|acid phosphatase activity GO:0016787|hydrolase activity	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_08040	G	G1	NA	NA	POPTR_0003s04330	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_08041	A	A1S	Potri.003G040900	Potri.003G040900(AS)	POPTR_0003s04340	sp|O94432|YHKF_SCHPO	Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC660.15 PE=2 SV=1	AT1G17640.1	| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr1:6067394-6069098 REVERSE LENGTH=369	LOC_Os02g12850.1	protein|RNA recognition motif containing protein, expressed	IMGA|Medtr5g097580.1	Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like protein chr5 41711192-41715991 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_08042	A	A4S	Potri.003G040700	Potri.003G040700(AS) Potri.003G036500(BS) Potri.003G036200(BS) Potri.003G040400(BS)	POPTR_0003s04350	sp|O59797|YCO6_SCHPO	Putative nucleosome assembly protein C364.06 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC364.06 PE=1 SV=1	AT2G19480.3	| Symbols: NAP1;2 | nucleosome assembly protein 1;2 | chr2:8438601-8441040 FORWARD LENGTH=372	LOC_Os05g46230.1	protein|NAP domain containing protein, putative, expressed	NA	NA	GO:0006281|DNA repair GO:0006334|nucleosome assembly GO:0046686|response to cadmium ion	GO:0003677|DNA binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane
pt2_08043	A	A1S	Potri.003G040600	Potri.003G040600(AS)	POPTR_0003s04360	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_08044	B	B2S	Potri.003G036300	Potri.003G036300(BS) Potri.003G040600(BS)	POPTR_0003s04360	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_08045	A	A4S	Potri.003G040300	Potri.003G040300(AS) Potri.003G036400(AS) Potri.003G040800(AS) Potri.003G036600(AS)	POPTR_0003s04380	sp|Q175F8|GLYR1_AEDAE	Putative oxidoreductase GLYR1 homolog OS=Aedes aegypti GN=AAEL006684 PE=3 SV=1	AT1G17650.1	| Symbols: GLYR2, GR2 | glyoxylate reductase 2 | chr1:6069594-6071964 REVERSE LENGTH=358	LOC_Os01g39270.1	protein|NAD binding domain of 6-phosphogluconate dehydrogenase containing protein, expressed	NA	NA	GO:0006098|pentose-phosphate shunt GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0004616|phosphogluconate dehydrogenase (decarboxylating) activity GO:0016491|oxidoreductase activity GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0030267|glyoxylate reductase (NADP) activity GO:0050662|coenzyme binding	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_08046	A	A4S	Potri.003G036500	Potri.003G036500(AS) Potri.003G040700(BS) Potri.003G036200(BS) Potri.003G040400(BS)	POPTR_0003s04390	sp|O59797|YCO6_SCHPO	Putative nucleosome assembly protein C364.06 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC364.06 PE=1 SV=1	AT2G19480.3	| Symbols: NAP1;2 | nucleosome assembly protein 1;2 | chr2:8438601-8441040 FORWARD LENGTH=372	LOC_Os05g46230.1	protein|NAP domain containing protein, putative, expressed	NA	NA	GO:0006281|DNA repair GO:0006334|nucleosome assembly GO:0046686|response to cadmium ion	GO:0003677|DNA binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane
pt2_08047	A	A4S	Potri.003G040500	Potri.003G040500(AS) Potri.003G040300(AS) Potri.003G040800(AS) Potri.003G036600(AS)	POPTR_0003s04410	NA	NA	AT1G17650.1	| Symbols: GLYR2, GR2 | glyoxylate reductase 2 | chr1:6069594-6071964 REVERSE LENGTH=358	LOC_Os01g39270.1	protein|NAD binding domain of 6-phosphogluconate dehydrogenase containing protein, expressed	NA	NA	GO:0006098|pentose-phosphate shunt GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0004616|phosphogluconate dehydrogenase (decarboxylating) activity GO:0016491|oxidoreductase activity GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0030267|glyoxylate reductase (NADP) activity GO:0050662|coenzyme binding	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_08048	A	A4S	Potri.003G036200	Potri.003G036200(AS) Potri.003G040400(AS) Potri.003G040700(BS) Potri.003G036500(BS)	POPTR_0003s04420	sp|O59797|YCO6_SCHPO	Putative nucleosome assembly protein C364.06 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC364.06 PE=1 SV=1	AT2G19480.3	| Symbols: NAP1;2 | nucleosome assembly protein 1;2 | chr2:8438601-8441040 FORWARD LENGTH=372	LOC_Os05g46230.1	protein|NAP domain containing protein, putative, expressed	NA	NA	GO:0006281|DNA repair GO:0006334|nucleosome assembly GO:0046686|response to cadmium ion	GO:0003677|DNA binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane
pt2_08049	B	B1S	Potri.003G040600	Potri.003G040600(BS)	POPTR_0003s04430	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_08050	G	G1	NA	NA	POPTR_0003s04450	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_08051	A	A2S	Potri.003G036800	Potri.003G036800(AS) Potri.003G040200(AS)	POPTR_0003s04460	sp|O74545|YCV6_SCHPO	Putative hydrolase C777.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC777.06c PE=2 SV=1	AT3G13800.1	| Symbols: | Metallo-hydrolase/oxidoreductase superfamily protein | chr3:4538879-4541366 FORWARD LENGTH=361	LOC_Os09g19920.1	protein|metallo-beta-lactamase family protein, putative, expressed	NA	NA	GO:0008152|metabolic process	GO:0003824|catalytic activity GO:0016787|hydrolase activity	GO:0005634|nucleus
pt2_08052	A	A2S	Potri.003G040100	Potri.003G040100(AS) Potri.003G036900(AS)	POPTR_0003s04470	sp|Q9ZWA6|MGP_ARATH	Zinc finger protein MAGPIE OS=Arabidopsis thaliana GN=MGP PE=1 SV=1	AT1G55110.1	| Symbols: AtIDD7, IDD7 | indeterminate(ID)-domain 7 | chr1:20560406-20562625 REVERSE LENGTH=455	LOC_Os01g09850.3	protein|ZOS1-04 - C2H2 zinc finger protein, expressed	IMGA|Medtr1g083100.1	Zinc finger protein-like protein chr1 21501009-21504901 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006635|fatty acid beta-oxidation GO:0016558|protein import into peroxisome matrix	GO:0003676|nucleic acid binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_08053	C	C2S	Potri.003G040000	Potri.003G040000(CS) Potri.003G037000(CS)	sp|Q93Z24|BGA17_ARATH	Beta-galactosidase 17 OS=Arabidopsis thaliana GN=BGAL17 PE=2 SV=1	AT1G72990.2	| Symbols: BGAL17 | beta-galactosidase 17 | chr1:27457480-27461867 REVERSE LENGTH=635	LOC_Os05g46200.3	protein|beta-galactosidase 8 precursor, putative, expressed	IMGA|Medtr5g024080.1	Beta-galactosidase chr5 9385294-9387714 H EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0005990|lactose catabolic process GO:0010228|vegetative to reproductive phase transition of meristem GO:0010413|glucuronoxylan metabolic process GO:0016926|protein desumoylation GO:0019513|lactose catabolic process, using glucoside 3-dehydrogenase GO:0019515|lactose catabolic process via UDP-galactose GO:0045492|xylan biosynthetic process GO:0050665|hydrogen peroxide biosynthetic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0004565|beta-galactosidase activity GO:0043169|cation binding	GO:0005576|extracellular region
pt2_08054	A	A3S	Potri.003G040000	Potri.003G040000(AS) Potri.003G037000(AS) Potri.003G037100(AA)	POPTR_0003s04490	sp|Q93Z24|BGA17_ARATH	Beta-galactosidase 17 OS=Arabidopsis thaliana GN=BGAL17 PE=2 SV=1	AT1G72990.2	| Symbols: BGAL17 | beta-galactosidase 17 | chr1:27457480-27461867 REVERSE LENGTH=635	LOC_Os05g46200.3	protein|beta-galactosidase 8 precursor, putative, expressed	IMGA|Medtr5g024080.1	Beta-galactosidase chr5 9385294-9387714 H EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0005990|lactose catabolic process GO:0010228|vegetative to reproductive phase transition of meristem GO:0010413|glucuronoxylan metabolic process GO:0016926|protein desumoylation GO:0019513|lactose catabolic process, using glucoside 3-dehydrogenase GO:0019515|lactose catabolic process via UDP-galactose GO:0045492|xylan biosynthetic process GO:0050665|hydrogen peroxide biosynthetic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0004565|beta-galactosidase activity GO:0043169|cation binding	GO:0005576|extracellular region
pt2_08055	C	C2S	Potri.003G040000	Potri.003G040000(CS) Potri.003G037000(CS)	sp|Q93Z24|BGA17_ARATH	Beta-galactosidase 17 OS=Arabidopsis thaliana GN=BGAL17 PE=2 SV=1	AT1G72990.2	| Symbols: BGAL17 | beta-galactosidase 17 | chr1:27457480-27461867 REVERSE LENGTH=635	LOC_Os05g46200.3	protein|beta-galactosidase 8 precursor, putative, expressed	IMGA|Medtr5g024080.1	Beta-galactosidase chr5 9385294-9387714 H EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0005990|lactose catabolic process GO:0010228|vegetative to reproductive phase transition of meristem GO:0010413|glucuronoxylan metabolic process GO:0016926|protein desumoylation GO:0019513|lactose catabolic process, using glucoside 3-dehydrogenase GO:0019515|lactose catabolic process via UDP-galactose GO:0045492|xylan biosynthetic process GO:0050665|hydrogen peroxide biosynthetic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0004565|beta-galactosidase activity GO:0043169|cation binding	GO:0005576|extracellular region
pt2_08056	A	A2S	Potri.003G040000	Potri.003G040000(AS) Potri.003G037000(AS)	POPTR_0003s04490	sp|Q93Z24|BGA17_ARATH	Beta-galactosidase 17 OS=Arabidopsis thaliana GN=BGAL17 PE=2 SV=1	AT1G72990.2	| Symbols: BGAL17 | beta-galactosidase 17 | chr1:27457480-27461867 REVERSE LENGTH=635	LOC_Os05g46200.3	protein|beta-galactosidase 8 precursor, putative, expressed	IMGA|Medtr5g024080.1	Beta-galactosidase chr5 9385294-9387714 H EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0005990|lactose catabolic process GO:0010228|vegetative to reproductive phase transition of meristem GO:0010413|glucuronoxylan metabolic process GO:0016926|protein desumoylation GO:0019513|lactose catabolic process, using glucoside 3-dehydrogenase GO:0019515|lactose catabolic process via UDP-galactose GO:0045492|xylan biosynthetic process GO:0050665|hydrogen peroxide biosynthetic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0004565|beta-galactosidase activity GO:0043169|cation binding	GO:0005576|extracellular region
pt2_08057	A	A2S	Potri.003G037100	Potri.003G037100(AS) Potri.003G039900(BS)	POPTR_0003s04500	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_08058	A	A3S	Potri.003G039800	Potri.003G039800(AS) Potri.003G037200(AS) Potri.001G196300(DS)	POPTR_0003s04510	NA	NA	AT1G55080.1	| Symbols: MED9 | MED9; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G29580.1); Has 67203 Blast hits to 25757 proteins in 1293 species: Archae - 12; Bacteria - 4374; Metazoa - 24340; Fungi - 7940; Plants - 5927; Viruses - 273; Other Eukaryotes - 24337 (source: NCBI BLink). | chr1:20553121-20554174 REVERSE LENGTH=244	LOC_Os01g31629.2	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0016592|mediator complex
pt2_08059	A	A2S	Potri.003G039700	Potri.003G039700(AS) Potri.003G037300(BS)	POPTR_0003s04520	sp|Q9LRW1|LBD22_ARATH	LOB domain-containing protein 22 OS=Arabidopsis thaliana GN=LBD22 PE=2 SV=1	AT3G13850.1	| Symbols: LBD22 | LOB domain-containing protein 22 | chr3:4559910-4560716 FORWARD LENGTH=268	LOC_Os08g31080.1	protein|DUF260 domain containing protein, putative, expressed	IMGA|contig_56252_1.1	LOB domain protein contig_56252 2437-1246 H PREDN 20111014	GO:0008150|biological_process	NA	GO:0005634|nucleus
pt2_08060	G	G2	NA	NA	POPTR_0003s04530	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_08061	A	A1S	Potri.003G037400	Potri.003G037400(AS)	POPTR_0003s04540	sp|Q93ZM7|CH60C_ARATH	Chaperonin CPN60-like 2, mitochondrial OS=Arabidopsis thaliana GN=At3g13860 PE=1 SV=2	AT3G13860.1	| Symbols: HSP60-3A | heat shock protein 60-3A | chr3:4561704-4565133 REVERSE LENGTH=572	LOC_Os05g46290.1	protein|T-complex protein, putative, expressed	IMGA|Medtr1g090130.1	Chaperonin CPN60-2 chr1 24825922-24820135 F EGN_Mt100125 20111014	GO:0006457|protein folding GO:0042026|protein refolding GO:0044267|cellular protein metabolic process GO:0046686|response to cadmium ion	GO:0005524|ATP binding	GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0005774|vacuolar membrane
pt2_08062	A	A2S	Potri.003G037500	Potri.003G037500(AS) Potri.003G039600(BS)	POPTR_0003s04550	sp|Q93ZM7|CH60C_ARATH	Chaperonin CPN60-like 2, mitochondrial OS=Arabidopsis thaliana GN=At3g13860 PE=1 SV=2	AT3G13860.1	| Symbols: HSP60-3A | heat shock protein 60-3A | chr3:4561704-4565133 REVERSE LENGTH=572	LOC_Os05g46290.1	protein|T-complex protein, putative, expressed	IMGA|Medtr1g090130.1	Chaperonin CPN60-2 chr1 24825922-24820135 F EGN_Mt100125 20111014	GO:0006457|protein folding GO:0042026|protein refolding GO:0044267|cellular protein metabolic process GO:0046686|response to cadmium ion	GO:0005524|ATP binding	GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0005774|vacuolar membrane
pt2_08063	A	A2S	Potri.003G039400	Potri.003G039400(AS) Potri.003G037600(AS)	POPTR_0003s04560	NA	NA	AT1G17620.1	| Symbols: | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | chr1:6062313-6063107 FORWARD LENGTH=264	LOC_Os05g11010.1	protein|harpin-induced protein 1 domain containing protein, expressed	IMGA|Medtr5g076170.1	hypothetical protein chr5 31437495-31438588 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_08064	A	A5S	Potri.001G205000	Potri.001G205000(AS) Potri.003G039300(AS) Potri.016G051900(BS) Potri.006G056300(BS) Potri.011G083800(BS)	POPTR_0003s04570	sp|Q9LT35|NEK6_ARATH	Serine/threonine-protein kinase Nek6 OS=Arabidopsis thaliana GN=NEK6 PE=2 SV=1	AT3G20860.1	| Symbols: ATNEK5, NEK5 | NIMA-related kinase 5 | chr3:7306147-7308434 FORWARD LENGTH=427	LOC_Os02g37830.1	protein|protein kinase domain containing protein, expressed	IMGA|Medtr1g071480.1	Serine/threonine protein kinase Nek2 chr1 17648833-17644700 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_08065	R	R	NA	NA	POPTR_0003s04580	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_08066	A	A1S	Potri.003G047500	Potri.003G047500(AS)	POPTR_0003s04590	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006661|phosphatidylinositol biosynthetic process GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_08067	G	G1	NA	NA	POPTR_0003s04600	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_08068	A	A2S	Potri.003G047700	Potri.003G047700(AS) Potri.001G190800(DS)	POPTR_0003s04610	sp|Q9M7N0|PROF3_HEVBR	Profilin-3 OS=Hevea brasiliensis PE=1 SV=1	AT4G29340.1	| Symbols: PRF4 | profilin 4 | chr4:14447718-14448467 FORWARD LENGTH=134	LOC_Os10g17680.1	protein|profilin domain containing protein, expressed	NA	NA	GO:0007010|cytoskeleton organization GO:0007015|actin filament organization GO:0009845|seed germination GO:0030041|actin filament polymerization GO:0051510|regulation of unidimensional cell growth GO:0090351|seedling development	GO:0003779|actin binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0009507|chloroplast GO:0015629|actin cytoskeleton
pt2_08069	A	A1S	Potri.003G047800	Potri.003G047800(AS)	POPTR_0003s04620	NA	NA	AT3G16490.1	| Symbols: IQD26 | IQ-domain 26 | chr3:5603962-5605489 REVERSE LENGTH=389	LOC_Os01g09470.1	protein|IQ calmodulin-binding motif family protein, expressed	NA	NA	GO:0008150|biological_process	GO:0005516|calmodulin binding	GO:0005575|cellular_component GO:0005794|Golgi apparatus
pt2_08070	A	A1S	Potri.003G047900	Potri.003G047900(AS)	POPTR_0003s04630	NA	NA	AT1G17930.1	| Symbols: | Aminotransferase-like, plant mobile domain family protein | chr1:6166638-6168432 REVERSE LENGTH=478	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_08071	A	A1S	Potri.003G048000	Potri.003G048000(AS)	POPTR_0003s04640	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_08072	A	A1S	Potri.003G048100	Potri.003G048100(AS)	POPTR_0003s04650	sp|Q8LAL2|IAA26_ARATH	Auxin-responsive protein IAA26 OS=Arabidopsis thaliana GN=IAA26 PE=1 SV=2	AT3G16500.1	| Symbols: PAP1, IAA26 | phytochrome-associated protein 1 | chr3:5612801-5614208 REVERSE LENGTH=269	LOC_Os05g44810.1	protein|OsIAA18 - Auxin-responsive Aux/IAA gene family member, expressed	IMGA|Medtr5g067350.1	Auxin-responsive protein IAA5 chr5 27469789-27473618 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006995|cellular response to nitrogen starvation GO:0009733|response to auxin stimulus	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_08073	C	C1S	Potri.003G048200	Potri.003G048200(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_08074	A	A1S	Potri.003G048300	Potri.003G048300(AS)	POPTR_0003s04670	NA	NA	AT1G33490.1	| Symbols: | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2062 (InterPro:IPR018639); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G10140.1); Has 88 Blast hits to 88 proteins in 29 species: Archae - 0; Bacteria - 28; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). | chr1:12150941-12152276 REVERSE LENGTH=175	LOC_Os05g01510.2	protein|cytoplasmic membrane protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion GO:0005783|endoplasmic reticulum
pt2_08075	A	A1S	Potri.003G048300	Potri.003G048300(AS)	POPTR_0003s04670	NA	NA	AT1G33490.1	| Symbols: | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2062 (InterPro:IPR018639); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G10140.1); Has 88 Blast hits to 88 proteins in 29 species: Archae - 0; Bacteria - 28; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). | chr1:12150941-12152276 REVERSE LENGTH=175	LOC_Os05g01510.2	protein|cytoplasmic membrane protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion GO:0005783|endoplasmic reticulum
pt2_08076	A	A1S	Potri.003G048300	Potri.003G048300(AS)	POPTR_0003s04670	NA	NA	AT1G33490.1	| Symbols: | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2062 (InterPro:IPR018639); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G10140.1); Has 88 Blast hits to 88 proteins in 29 species: Archae - 0; Bacteria - 28; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). | chr1:12150941-12152276 REVERSE LENGTH=175	LOC_Os05g01510.2	protein|cytoplasmic membrane protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion GO:0005783|endoplasmic reticulum
pt2_08077	A	A1S	Potri.003G048600	Potri.003G048600(AS)	POPTR_0003s04680	sp|Q84WF5|VAMPL_ARATH	Probable VAMP-like protein At1g33475 OS=Arabidopsis thaliana GN=At1g33475 PE=2 SV=1	AT4G10170.2	| Symbols: | SNARE-like superfamily protein | chr4:6344587-6345351 FORWARD LENGTH=254	LOC_Os08g01880.1	protein|synaptobrevin-related family protein, putative, expressed	NA	NA	GO:0006810|transport GO:0016192|vesicle-mediated transport	GO:0003674|molecular_function	GO:0005886|plasma membrane GO:0016021|integral to membrane
pt2_08078	A	A1S	Potri.003G048700	Potri.003G048700(AS)	POPTR_0003s04700	NA	NA	AT1G71260.1	| Symbols: ATWHY2, WHY2 | WHIRLY 2 | chr1:26861849-26863391 REVERSE LENGTH=238	LOC_Os02g06370.1	protein|whirly transcription factor domain containing protein, expressed	IMGA|Medtr5g038560.1	DNA-binding protein p24 chr5 16515456-16520562 F EGN_Mt100125 20111014	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0006281|DNA repair GO:0006355|regulation of transcription, DNA-dependent GO:0006952|defense response GO:0009086|methionine biosynthetic process	GO:0003677|DNA binding	GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_08079	C	C1S	Potri.003G048800	Potri.003G048800(CS)	sp|Q54J88|MMS19_DICDI	MMS19 nucleotide excision repair protein homolog OS=Dictyostelium discoideum GN=mms19 PE=3 SV=2	AT5G48120.1	| Symbols: | ARM repeat superfamily protein | chr5:19508210-19514774 REVERSE LENGTH=1134	LOC_Os07g08050.1	protein|expressed protein	IMGA|Medtr5g085950.1	MMS19 nucleotide excision repair protein-like protein chr5 36138053-36148304 H EGN_Mt100125 20111014	NA	NA	GO:0005575|cellular_component GO:0005634|nucleus
pt2_08080	A	A1S	Potri.003G048800	Potri.003G048800(AS)	POPTR_0003s04720	sp|Q54J88|MMS19_DICDI	MMS19 nucleotide excision repair protein homolog OS=Dictyostelium discoideum GN=mms19 PE=3 SV=2	AT5G48120.1	| Symbols: | ARM repeat superfamily protein | chr5:19508210-19514774 REVERSE LENGTH=1134	LOC_Os07g08050.1	protein|expressed protein	IMGA|Medtr5g085950.1	MMS19 nucleotide excision repair protein-like protein chr5 36138053-36148304 H EGN_Mt100125 20111014	NA	NA	GO:0005575|cellular_component GO:0005634|nucleus
pt2_08081	A	A2S	Potri.003G048900	Potri.003G048900(AS) Potri.001G190000(DS)	POPTR_0003s04730	sp|Q4U0S5|PAF1_DANRE	RNA polymerase II-associated factor 1 homolog OS=Danio rerio GN=paf1 PE=1 SV=1	AT1G79730.1	| Symbols: ELF7 | hydroxyproline-rich glycoprotein family protein | chr1:30000743-30003969 REVERSE LENGTH=589	LOC_Os08g06070.1	protein|ELF7, putative, expressed	NA	NA	GO:0009640|photomorphogenesis GO:0009910|negative regulation of flower development GO:0010388|cullin deneddylation GO:0016567|protein ubiquitination GO:0016571|histone methylation GO:0016579|protein deubiquitination GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_08082	A	A1S	Potri.003G049100	Potri.003G049100(AS)	POPTR_0003s04740	sp|Q2V9B0|MY1R1_SOLTU	Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1	AT3G16350.1	| Symbols: | Homeodomain-like superfamily protein | chr3:5547828-5549397 FORWARD LENGTH=387	LOC_Os10g41200.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr5g037080.1	DIV1B protein chr5 15763383-15765765 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009651|response to salt stress GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009739|response to gibberellin stimulus GO:0009753|response to jasmonic acid stimulus GO:0046686|response to cadmium ion	GO:0003676|nucleic acid binding GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_08083	R	R	NA	NA	POPTR_0003s04750	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_08084	G	G1	NA	NA	POPTR_0003s04760	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_08085	A	A1S	Potri.003G049300	Potri.003G049300(AS)	POPTR_0003s04770	sp|P51615|MAOX_VITVI	NADP-dependent malic enzyme OS=Vitis vinifera PE=2 SV=1	AT1G79750.1	| Symbols: ATNADP-ME4, NADP-ME4 | NADP-malic enzyme 4 | chr1:30007655-30011179 REVERSE LENGTH=646	LOC_Os01g52500.3	protein|NADP-dependent malic enzyme, putative, expressed	NA	NA	GO:0006094|gluconeogenesis GO:0006108|malate metabolic process GO:0006633|fatty acid biosynthetic process GO:0007010|cytoskeleton organization GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0010498|proteasomal protein catabolic process GO:0051289|protein homotetramerization GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0004470|malic enzyme activity GO:0004473|malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity GO:0008270|zinc ion binding GO:0016491|oxidoreductase activity GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0016619|malate dehydrogenase (oxaloacetate-decarboxylating) activity GO:0016652|oxidoreductase activity, acting on NADH or NADPH, NAD or NADP as acceptor GO:0042803|protein homodimerization activity GO:0046872|metal ion binding GO:0050897|cobalt ion binding GO:0051287|NAD binding	GO:0009507|chloroplast
pt2_08086	C	C1S	Potri.003G049400	Potri.003G049400(CS)	sp|Q7FMW4|PDR15_ORYSJ	Pleiotropic drug resistance protein 15 OS=Oryza sativa subsp. japonica GN=PDR15 PE=3 SV=1	AT3G16340.2	| Symbols: PDR1 | pleiotropic drug resistance 1 | chr3:5539897-5546263 FORWARD LENGTH=1411	LOC_Os01g52560.1	protein|Plant PDR ABC transporter associated domain containing protein, expressed	IMGA|Medtr5g070320.1	Pleiotropic drug resistance ABC transporter family protein chr5 28781263-28793818 H EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0002831|regulation of response to biotic stimulus GO:0006612|protein targeting to membrane GO:0006855|drug transmembrane transport GO:0006995|cellular response to nitrogen starvation GO:0009595|detection of biotic stimulus GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process GO:0009737|response to abscisic acid stimulus GO:0009817|defense response to fungus, incompatible interaction GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0015691|cadmium ion transport GO:0030003|cellular cation homeostasis GO:0031347|regulation of defense response GO:0031348|negative regulation of defense response GO:0042344|indole glucosinolate catabolic process GO:0042742|defense response to bacterium GO:0043900|regulation of multi-organism process GO:0050832|defense response to fungus GO:0052544|defense response by callose deposition in cell wall GO:0070838|divalent metal ion transport GO:0071366|cellular response to indolebutyric acid stimulus	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0015086|cadmium ion transmembrane transporter activity GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0005739|mitochondrion GO:0005774|vacuolar membrane GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009941|chloroplast envelope GO:0016020|membrane
pt2_08087	A	A1S	Potri.003G049500	Potri.003G049500(AS)	POPTR_0003s04790	sp|Q5Z9S8|PDR12_ORYSJ	Pleiotropic drug resistance protein 12 OS=Oryza sativa subsp. japonica GN=PDR12 PE=2 SV=1	AT3G16340.2	| Symbols: PDR1 | pleiotropic drug resistance 1 | chr3:5539897-5546263 FORWARD LENGTH=1411	LOC_Os06g36090.1	protein|ABC-2 type transporter, putative, expressed	NA	NA	GO:0006612|protein targeting to membrane GO:0006855|drug transmembrane transport GO:0009611|response to wounding GO:0009805|coumarin biosynthetic process GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010363|regulation of plant-type hypersensitive response GO:0015850|organic hydroxy compound transport GO:1901140|p-coumaryl alcohol transport GO:1901141|regulation of lignin biosynthetic process	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0005886|plasma membrane
pt2_08088	A	A1S	Potri.003G049600	Potri.003G049600(AS)	POPTR_0003s04800	sp|Q94A18|AB29G_ARATH	ABC transporter G family member 29 OS=Arabidopsis thaliana GN=ABCG29 PE=2 SV=2	AT3G16340.1	| Symbols: ATPDR1, PDR1 | pleiotropic drug resistance 1 | chr3:5539897-5546263 FORWARD LENGTH=1416	LOC_Os06g36090.2	protein|ABC-2 type transporter, putative, expressed	IMGA|Medtr5g070320.1	Pleiotropic drug resistance ABC transporter family protein chr5 28781263-28793818 H EGN_Mt100125 20111014	GO:0006612|protein targeting to membrane GO:0006855|drug transmembrane transport GO:0009611|response to wounding GO:0009805|coumarin biosynthetic process GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010363|regulation of plant-type hypersensitive response GO:0015850|organic hydroxy compound transport GO:1901140|p-coumaryl alcohol transport GO:1901141|regulation of lignin biosynthetic process	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0005886|plasma membrane
pt2_08089	A	A1S	Potri.003G049700	Potri.003G049700(AS)	POPTR_0003s04820	sp|P40235|HHP1_SCHPO	Casein kinase I homolog hhp1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=hhp1 PE=2 SV=1	AT2G25760.1	| Symbols: | Protein kinase family protein | chr2:10985118-10988652 REVERSE LENGTH=673	LOC_Os01g54100.1	protein|CK1_CaseinKinase_1a.2 - CK1 includes the casein kinase 1 kinases, expressed	IMGA|Medtr1g042430.1	Casein kinase chr1 12130628-12134366 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_08090	C	C1S	Potri.003G049700	Potri.003G049700(CS)	sp|P40235|HHP1_SCHPO	Casein kinase I homolog hhp1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=hhp1 PE=2 SV=1	AT2G25760.1	| Symbols: | Protein kinase family protein | chr2:10985118-10988652 REVERSE LENGTH=673	LOC_Os01g54100.1	protein|CK1_CaseinKinase_1a.2 - CK1 includes the casein kinase 1 kinases, expressed	IMGA|Medtr1g042430.1	Casein kinase chr1 12130628-12134366 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_08091	B	B1S	Potri.003G049800	Potri.003G049800(BS)	POPTR_0003s04840	NA	NA	AT3G16330.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52140.1); Has 109 Blast hits to 109 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:5535263-5535880 FORWARD LENGTH=205	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_08092	A	A2S	Potri.003G050000	Potri.003G050000(AS) Potri.003G050100(AA)	POPTR_0003s04850	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_08093	A	A1S	Potri.003G050100	Potri.003G050100(AS)	POPTR_0003s04860	sp|Q9ZU11|ATB15_ARATH	Homeobox-leucine zipper protein ATHB-15 OS=Arabidopsis thaliana GN=ATHB-15 PE=1 SV=1	AT1G52150.1	| Symbols: ATHB-15, ATHB15, CNA, ICU4 | Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein | chr1:19409913-19413961 REVERSE LENGTH=836	LOC_Os03g43930.2	protein|START domain containing protein, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0006995|cellular response to nitrogen starvation GO:0007155|cell adhesion GO:0009855|determination of bilateral symmetry GO:0009887|organ morphogenesis GO:0009944|polarity specification of adaxial/abaxial axis GO:0009965|leaf morphogenesis GO:0010014|meristem initiation GO:0010051|xylem and phloem pattern formation GO:0010073|meristem maintenance GO:0010075|regulation of meristem growth GO:0010087|phloem or xylem histogenesis GO:0010089|xylem development GO:0010090|trichome morphogenesis GO:0045010|actin nucleation GO:0048263|determination of dorsal identity GO:0048439|flower morphogenesis GO:0048519|negative regulation of biological process GO:0048765|root hair cell differentiation GO:0071555|cell wall organization GO:0080060|integument development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_08094	A	A1S	Potri.003G050200	Potri.003G050200(AS)	POPTR_0003s04870	NA	NA	AT5G25840.1	| Symbols: | Protein of unknown function (DUF1677) | chr5:9010909-9011430 REVERSE LENGTH=173	LOC_Os01g10260.1	protein|expressed protein	IMGA|contig_171270_1.1	Unknown protein contig_171270 1317-252 F PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_08095	A	A3S	Potri.003G050300	Potri.003G050300(AS) Potri.015G044600(DS) Potri.T113300(DS)	POPTR_0003s04880	NA	NA	AT1G18370.1	| Symbols: HIK, ATNACK1, NACK1 | ATP binding microtubule motor family protein | chr1:6319732-6323820 REVERSE LENGTH=974	LOC_Os01g33040.1	protein|kinesin motor domain containing protein, expressed	NA	NA	GO:0000226|microtubule cytoskeleton organization GO:0008283|cell proliferation GO:0009555|pollen development GO:0009558|embryo sac cellularization GO:0010583|response to cyclopentenone GO:0016572|histone phosphorylation GO:0048229|gametophyte development	GO:0003777|microtubule motor activity GO:0005524|ATP binding	GO:0005737|cytoplasm
pt2_08096	A	A1S	Potri.003G050400	Potri.003G050400(AS)	POPTR_0003s04890	sp|B9GXD6|CSPLO_POPTR	CASP-like protein POPTRDRAFT_553757 OS=Populus trichocarpa GN=POPTRDRAFT_553757 PE=3 SV=1	AT3G16300.1	| Symbols: | Uncharacterised protein family (UPF0497) | chr3:5525491-5526207 REVERSE LENGTH=212	LOC_Os01g52610.1	protein|membrane associated DUF588 domain containing protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_08097	A	A1S	Potri.003G050500	Potri.003G050500(AS)	POPTR_0003s04900	sp|Q9SK27|ENL1_ARATH	Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060 PE=1 SV=2	AT1G79800.1	| Symbols: ENODL7, AtENODL7 | early nodulin-like protein 7 | chr1:30018549-30019217 FORWARD LENGTH=192	LOC_Os06g36010.1	protein|plastocyanin-like domain containing protein, putative, expressed	IMGA|Medtr5g006040.1	Early nodulin-like protein chr5 502223-501280 F EGN_Mt100125 20111014	NA	GO:0005507|copper ion binding GO:0009055|electron carrier activity	GO:0005886|plasma membrane GO:0031225|anchored to membrane
pt2_08098	A	A1S	Potri.003G050600	Potri.003G050600(AS)	POPTR_0003s04910	sp|Q2JNP0|FTSH_SYNJB	ATP-dependent zinc metalloprotease FtsH OS=Synechococcus sp. (strain JA-2-3B'a(2-13)) GN=ftsH PE=3 SV=1	AT3G16290.1	| Symbols: EMB2083 | AAA-type ATPase family protein | chr3:5521187-5524995 REVERSE LENGTH=876	LOC_Os06g45820.1	protein|OsFtsH2 FtsH protease, homologue of AtFtsH2/8, expressed	IMGA|Medtr5g069780.2	Cell division protease ftsH-like protein chr5 28612359-28618409 F EGN_Mt100125 20111014	GO:0000023|maltose metabolic process GO:0006508|proteolysis GO:0009793|embryo development ending in seed dormancy GO:0010304|PSII associated light-harvesting complex II catabolic process GO:0019252|starch biosynthetic process	GO:0000166|nucleotide binding GO:0004176|ATP-dependent peptidase activity GO:0004222|metalloendopeptidase activity GO:0004252|serine-type endopeptidase activity GO:0005524|ATP binding GO:0008237|metallopeptidase activity GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity	GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009941|chloroplast envelope
pt2_08099	A	A1S	Potri.003G050700	Potri.003G050700(AS)	POPTR_0003s04920	sp|Q9LYD3|DREB3_ARATH	Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana GN=DREB3 PE=2 SV=1	AT5G11590.1	| Symbols: TINY2 | Integrase-type DNA-binding superfamily protein | chr5:3727789-3728499 REVERSE LENGTH=236	LOC_Os02g43940.1	protein|AP2 domain containing protein, expressed	IMGA|Medtr5g012910.1	Ethylene-responsive transcription factor TINY chr5 3739805-3739260 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_08100	A	A1S	Potri.003G050900	Potri.003G050900(AS)	POPTR_0003s04930	sp|Q41951|TIP21_ARATH	Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2	AT3G16240.1	| Symbols: DELTA-TIP, TIP2;1, DELTA-TIP1, AQP1, ATTIP2;1 | delta tonoplast integral protein | chr3:5505534-5506788 FORWARD LENGTH=250	LOC_Os06g22960.1	protein|aquaporin protein, putative, expressed	IMGA|Medtr5g012810.1	Aquaporin TIP2-3 chr5 3671983-3673705 F EGN_Mt100125 20111014	GO:0006810|transport GO:0006816|calcium ion transport GO:0006833|water transport GO:0007030|Golgi organization GO:0009651|response to salt stress GO:0015840|urea transport GO:0030003|cellular cation homeostasis GO:0055085|transmembrane transport GO:0070838|divalent metal ion transport	GO:0005215|transporter activity GO:0015200|methylammonium transmembrane transporter activity GO:0015204|urea transmembrane transporter activity GO:0015250|water channel activity GO:0051739|ammonia transmembrane transporter activity	GO:0000326|protein storage vacuole GO:0005618|cell wall GO:0005737|cytoplasm GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0009505|plant-type cell wall GO:0009506|plasmodesma GO:0009507|chloroplast GO:0009705|plant-type vacuole membrane GO:0009941|chloroplast envelope GO:0016020|membrane GO:0016021|integral to membrane GO:0042807|central vacuole
pt2_08101	A	A1S	Potri.003G051000	Potri.003G051000(AS)	POPTR_0003s04940	NA	NA	AT3G16230.3	| Symbols: | Predicted eukaryotic LigT | chr3:5500991-5503303 FORWARD LENGTH=409	LOC_Os01g13100.3	protein|KH domain containing protein, putative, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0016070|RNA metabolic process	GO:0003723|RNA binding GO:0003824|catalytic activity	GO:0005622|intracellular GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_08102	A	A1S	Potri.003G051100	Potri.003G051100(AS)	POPTR_0003s04950	sp|Q8YRI1|YY46_NOSS1	Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1	AT2G26490.1	| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr2:11268035-11269432 FORWARD LENGTH=465	LOC_Os12g40260.1	protein|WD-40 repeat family protein, putative, expressed	IMGA|Medtr5g018520.1	Guanine nucleotide-binding protein subunit beta-like protein chr5 6660942-6659569 H EGN_Mt100125 20111014	GO:0006944|cellular membrane fusion GO:0008150|biological_process	GO:0000166|nucleotide binding	GO:0005737|cytoplasm GO:0005834|heterotrimeric G-protein complex
pt2_08103	C	C1S	Potri.003G051100	Potri.003G051100(CS)	sp|Q8YRI1|YY46_NOSS1	Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1	AT2G26490.1	| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr2:11268035-11269432 FORWARD LENGTH=465	LOC_Os12g40260.1	protein|WD-40 repeat family protein, putative, expressed	IMGA|Medtr5g018520.1	Guanine nucleotide-binding protein subunit beta-like protein chr5 6660942-6659569 H EGN_Mt100125 20111014	GO:0006944|cellular membrane fusion GO:0008150|biological_process	GO:0000166|nucleotide binding	GO:0005737|cytoplasm GO:0005834|heterotrimeric G-protein complex
pt2_08104	A	A2S	Potri.003G051200	Potri.003G051200(AS) Potri.001G186200(DS)	POPTR_0003s04970	NA	NA	AT3G16200.1	| Symbols: | unknown protein; Has 97 Blast hits to 97 proteins in 15 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). | chr3:5491619-5493605 REVERSE LENGTH=456	LOC_Os01g31220.1	protein|expressed protein	NA	NA	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0008150|biological_process GO:0009086|methionine biosynthetic process	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_08105	A	A1S	Potri.003G051300	Potri.003G051300(AS)	POPTR_0003s04980	sp|Q9ZSY8|IAA27_ARATH	Auxin-responsive protein IAA27 OS=Arabidopsis thaliana GN=IAA27 PE=1 SV=1	AT4G29080.1	| Symbols: PAP2, IAA27 | phytochrome-associated protein 2 | chr4:14323665-14325213 REVERSE LENGTH=305	LOC_Os06g22870.1	protein|OsIAA21 - Auxin-responsive Aux/IAA gene family member, expressed	IMGA|Medtr5g030710.1	Auxin-responsive protein (Aux/IAA) chr5 12699892-12694370 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006417|regulation of translation GO:0007389|pattern specification process GO:0009733|response to auxin stimulus GO:0048438|floral whorl development GO:0048439|flower morphogenesis	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0046983|protein dimerization activity	GO:0005622|intracellular GO:0005634|nucleus
pt2_08106	A	A1S	Potri.003G051400	Potri.003G051400(AS)	POPTR_0003s04990	NA	NA	AT3G27750.1	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: Vacuolar sorting protein 9 (VPS9) domain (TAIR:AT5G09320.1); Has 106 Blast hits to 106 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 102; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:10284820-10285488 FORWARD LENGTH=222	LOC_Os04g39970.1	protein|vacuolar sorting protein 9 domain-containing protein, putative, expressed	NA	NA	GO:0000373|Group II intron splicing GO:0009658|chloroplast organization	GO:0003723|RNA binding	GO:0009507|chloroplast
pt2_08107	A	A2S	Potri.003G051500	Potri.003G051500(AS) Potri.001G186000(DS)	POPTR_0003s05000	sp|Q9CA86|PEX2_ARATH	Peroxisome biogenesis protein 2 OS=Arabidopsis thaliana GN=PEX2 PE=1 SV=1	AT1G79810.1	| Symbols: TED3, PEX2, ATPEX2 | Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein | chr1:30019944-30022156 FORWARD LENGTH=333	LOC_Os05g19480.1	protein|peroxisome assembly protein, putative, expressed	NA	NA	GO:0006635|fatty acid beta-oxidation GO:0006869|lipid transport GO:0006888|ER to Golgi vesicle-mediated transport GO:0006891|intra-Golgi vesicle-mediated transport GO:0007031|peroxisome organization GO:0009640|photomorphogenesis GO:0010351|lithium ion transport GO:0016558|protein import into peroxisome matrix GO:0044265|cellular macromolecule catabolic process	GO:0008270|zinc ion binding	GO:0005777|peroxisome GO:0005829|cytosol GO:0009506|plasmodesma
pt2_08108	A	A1S	Potri.003G051600	Potri.003G051600(AS)	POPTR_0003s05010	sp|Q8S3D1|BH068_ARATH	Transcription factor bHLH68 OS=Arabidopsis thaliana GN=BHLH68 PE=2 SV=2	AT4G29100.1	| Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr4:14341140-14344575 FORWARD LENGTH=407	LOC_Os05g14010.1	protein|ethylene-responsive protein related, putative, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_08109	A	A1S	Potri.003G051700	Potri.003G051700(AS)	POPTR_0003s05020	sp|B7NLB5|RUTB_ECO7I	Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=rutB PE=3 SV=1	AT3G16190.1	| Symbols: | Isochorismatase family protein | chr3:5489883-5491195 REVERSE LENGTH=196	LOC_Os02g17640.1	protein|isochorismatase family protein, putative, expressed	NA	NA	GO:0008152|metabolic process	GO:0003824|catalytic activity	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_08110	A	A1S	Potri.003G051800	Potri.003G051800(AS)	POPTR_0003s05030	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_08111	A	A1S	Potri.003G051900	Potri.003G051900(AS)	POPTR_0003s05040	NA	NA	AT3G16175.1	| Symbols: | Thioesterase superfamily protein | chr3:5480497-5481208 FORWARD LENGTH=157	LOC_Os01g12920.1	protein|thioesterase family protein, putative, expressed	IMGA|Medtr5g069640.1	Acyl-coenzyme A thioesterase chr5 28544629-28547810 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0016788|hydrolase activity, acting on ester bonds GO:0047617|acyl-CoA hydrolase activity	NA
pt2_08112	A	A1S	Potri.003G051900	Potri.003G051900(AS)	POPTR_0003s05040	NA	NA	AT3G16175.1	| Symbols: | Thioesterase superfamily protein | chr3:5480497-5481208 FORWARD LENGTH=157	LOC_Os01g12920.1	protein|thioesterase family protein, putative, expressed	IMGA|Medtr5g069640.1	Acyl-coenzyme A thioesterase chr5 28544629-28547810 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0016788|hydrolase activity, acting on ester bonds GO:0047617|acyl-CoA hydrolase activity	NA
pt2_08113	A	A1S	Potri.003G051900	Potri.003G051900(AS)	POPTR_0003s05040	NA	NA	AT3G16175.1	| Symbols: | Thioesterase superfamily protein | chr3:5480497-5481208 FORWARD LENGTH=157	LOC_Os01g12920.1	protein|thioesterase family protein, putative, expressed	IMGA|Medtr5g069640.1	Acyl-coenzyme A thioesterase chr5 28544629-28547810 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0016788|hydrolase activity, acting on ester bonds GO:0047617|acyl-CoA hydrolase activity	NA
pt2_08114	A	A1S	Potri.003G052000	Potri.003G052000(AS)	POPTR_0003s05050	sp|P45406|CCMH_RHIME	Cytochrome c-type biogenesis protein CcmH OS=Rhizobium meliloti (strain 1021) GN=ccmH PE=3 SV=2	AT1G15220.2	| Symbols: ATCCMH, CCMH | cytochrome c biogenesis protein family | chr1:5240471-5241117 REVERSE LENGTH=159	LOC_Os02g17520.1	protein|cytochrome c-type biogenesis protein ccmH precursor, putative, expressed	IMGA|Medtr5g011180.1	Cytochrome c-type biogenesis protein ccmH chr5 2932118-2933077 E EGN_Mt100125 20111014	GO:0009790|embryo development GO:0017004|cytochrome complex assembly GO:0019243|methylglyoxal catabolic process to D-lactate	GO:0005515|protein binding GO:0016491|oxidoreductase activity	GO:0005739|mitochondrion GO:0005743|mitochondrial inner membrane GO:0043234|protein complex
pt2_08115	A	A2S	Potri.003G052100	Potri.003G052100(AS) Potri.001G185100(BS)	POPTR_0003s05060	sp|Q0WVL7|GOGC5_ARATH	Golgin candidate 5 OS=Arabidopsis thaliana GN=GC5 PE=1 SV=1	AT1G79830.3	| Symbols: GC5 | golgin candidate 5 | chr1:30028110-30033508 REVERSE LENGTH=956	LOC_Os05g48620.1	protein|tRNA-binding arm, putative, expressed	NA	NA	GO:0006944|cellular membrane fusion GO:0008150|biological_process GO:0048193|Golgi vesicle transport	GO:0005515|protein binding	GO:0005576|extracellular region GO:0005634|nucleus GO:0005737|cytoplasm GO:0005794|Golgi apparatus
pt2_08116	A	A1S	Potri.003G052200	Potri.003G052200(AS)	POPTR_0003s05070	sp|Q8LCA1|TMP14_ARATH	Thylakoid membrane phosphoprotein 14 kDa, chloroplastic OS=Arabidopsis thaliana GN=TMP14 PE=1 SV=2	AT1G52220.1	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: photosystem I P subunit (TAIR:AT2G46820.2); Has 291 Blast hits to 291 proteins in 50 species: Archae - 0; Bacteria - 90; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | chr1:19453770-19454605 REVERSE LENGTH=156	LOC_Os07g28610.3	protein|expressed protein	NA	NA	GO:0006364|rRNA processing GO:0008150|biological_process GO:0009657|plastid organization GO:0010103|stomatal complex morphogenesis GO:0010207|photosystem II assembly GO:0019684|photosynthesis, light reaction GO:0035304|regulation of protein dephosphorylation GO:0043085|positive regulation of catalytic activity	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane
pt2_08117	G	G1	NA	NA	POPTR_0003s05080	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_08118	R	R	NA	NA	POPTR_0003s05090	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_08119	A	A1S	Potri.003G052400	Potri.003G052400(AS)	POPTR_0003s05100	sp|P46607|HGL2_ARATH	Homeobox-leucine zipper protein GLABRA 2 OS=Arabidopsis thaliana GN=GL2 PE=2 SV=3	AT1G79840.1	| Symbols: GL2 | HD-ZIP IV family of homeobox-leucine zipper protein with lipid-binding START domain | chr1:30037526-30041013 FORWARD LENGTH=747	LOC_Os01g55549.1	protein|homeobox and START domains containing protein, putative, expressed	IMGA|Medtr5g029320.1	Homeobox-leucine zipper protein ROC3 chr5 12022721-12028684 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009888|tissue development GO:0009957|epidermal cell fate specification GO:0010062|negative regulation of trichoblast fate specification GO:0030154|cell differentiation	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_08120	A	A1S	Potri.003G052500	Potri.003G052500(AS)	POPTR_0003s05110	sp|O04006|PSAH_BRARA	Photosystem I reaction center subunit VI, chloroplastic OS=Brassica rapa GN=PSAH PE=2 SV=1	AT1G52230.1	| Symbols: PSAH2, PSAH-2, PSI-H | photosystem I subunit H2 | chr1:19454902-19455508 FORWARD LENGTH=145	LOC_Os05g48630.2	protein|expressed protein	NA	NA	GO:0006364|rRNA processing GO:0009657|plastid organization GO:0009773|photosynthetic electron transport in photosystem I GO:0010207|photosystem II assembly GO:0015979|photosynthesis GO:0019344|cysteine biosynthetic process GO:0019684|photosynthesis, light reaction GO:0035304|regulation of protein dephosphorylation	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009522|photosystem I GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009538|photosystem I reaction center GO:0009579|thylakoid GO:0010287|plastoglobule GO:0016020|membrane
pt2_08121	A	A1S	Potri.003G052600	Potri.003G052600(AS)	POPTR_0003s05120	sp|Q9LV40|ROGF8_ARATH	Rho guanine nucleotide exchange factor 8 OS=Arabidopsis thaliana GN=ROPGEF8 PE=1 SV=1	AT1G79860.1	| Symbols: ATROPGEF12, ROPGEF12, MEE64 | RHO guanyl-nucleotide exchange factor 12 | chr1:30042172-30044092 REVERSE LENGTH=515	LOC_Os05g48640.1	protein|ATROPGEF7/ROPGEF7, putative, expressed	IMGA|Medtr5g081410.1	Rop guanine nucleotide exchange factor chr5 33853946-33849635 E EGN_Mt100125 20111014	GO:0009793|embryo development ending in seed dormancy GO:0009860|pollen tube growth	GO:0005089|Rho guanyl-nucleotide exchange factor activity	GO:0005634|nucleus GO:0005886|plasma membrane GO:0090406|pollen tube
pt2_08122	A	A1S	Potri.003G052700	Potri.003G052700(AS)	POPTR_0003s05150	sp|Q8U3Y2|GYAR_PYRFU	Glyoxylate reductase OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=gyaR PE=3 SV=1	AT1G79870.1	| Symbols: | D-isomer specific 2-hydroxyacid dehydrogenase family protein | chr1:30044794-30045851 FORWARD LENGTH=313	LOC_Os01g12830.2	protein|erythronate-4-phosphate dehydrogenase domain containing protein, expressed	NA	NA	GO:0009854|oxidative photosynthetic carbon pathway	GO:0016491|oxidoreductase activity GO:0016618|hydroxypyruvate reductase activity GO:0030267|glyoxylate reductase (NADP) activity	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_08123	A	A1S	Potri.003G052800	Potri.003G052800(AS)	POPTR_0003s05160	sp|Q94748|DYL2_SCHMA	Probable dynein light chain OS=Schistosoma mansoni PE=3 SV=1	AT1G52240.2	| Symbols: ATROPGEF11, ROPGEF11, PIRF1 | RHO guanyl-nucleotide exchange factor 11 | chr1:19458844-19459235 REVERSE LENGTH=94	LOC_Os01g55510.1	protein|dynein light chain type 1 domain containing protein, expressed	NA	NA	GO:0000226|microtubule cytoskeleton organization GO:0009860|pollen tube growth GO:0048364|root development GO:0080147|root hair cell development	GO:0005089|Rho guanyl-nucleotide exchange factor activity	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005875|microtubule associated complex
pt2_08124	A	A1S	Potri.003G052900	Potri.003G052900(AS)	POPTR_0003s05170	NA	NA	AT1G45688.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42860.1); Has 258 Blast hits to 242 proteins in 39 species: Archae - 0; Bacteria - 11; Metazoa - 10; Fungi - 14; Plants - 198; Viruses - 17; Other Eukaryotes - 8 (source: NCBI BLink). | chr1:17191502-17192870 FORWARD LENGTH=342	LOC_Os06g06780.1	protein|harpin-induced protein, putative, expressed	NA	NA	GO:0008150|biological_process GO:0048767|root hair elongation	GO:0003674|molecular_function	GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_08125	A	A1S	Potri.003G053000	Potri.003G053000(AS)	POPTR_0003s05180	NA	NA	AT2G25737.1	| Symbols: | Sulfite exporter TauE/SafE family protein | chr2:10977174-10979677 FORWARD LENGTH=476	LOC_Os09g17600.2	protein|membrane protein, putative, expressed	IMGA|Medtr5g019950.1	Membrane protein-like protein chr5 7311160-7315089 H EGN_Mt100125 20111014	NA	NA	GO:0009507|chloroplast GO:0016021|integral to membrane
pt2_08126	A	A2S	Potri.003G053100	Potri.003G053100(AS) Potri.001G183200(DS)	POPTR_0003s05190	sp|Q8LEM8|RL373_ARATH	60S ribosomal protein L37-3 OS=Arabidopsis thaliana GN=RPL37C PE=3 SV=1	AT3G16080.1	| Symbols: | Zinc-binding ribosomal protein family protein | chr3:5454892-5455677 FORWARD LENGTH=95	LOC_Os02g56990.1	protein|ribosomal protein L37, putative, expressed	NA	NA	GO:0001510|RNA methylation GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005737|cytoplasm GO:0005840|ribosome GO:0022625|cytosolic large ribosomal subunit
pt2_08127	A	A1S	Potri.003G053200	Potri.003G053200(AS)	POPTR_0003s05200	NA	NA	AT1G15240.2	| Symbols: | Phox-associated domain;Phox-like;Sorting nexin, C-terminal | chr1:5243799-5248604 FORWARD LENGTH=1020	LOC_Os05g50660.1	protein|PX domain containing protein, putative, expressed	IMGA|contig_95319_1.1	Unknown protein contig_95319 3176-516 H PREDN 20111014	GO:0007165|signal transduction GO:0035556|intracellular signal transduction	GO:0035091|phosphatidylinositol binding	GO:0005634|nucleus
pt2_08128	G	G1	NA	NA	POPTR_0003s05210	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_08129	A	A2S	Potri.T140000	Potri.T140000(AS) Potri.003G053300(AS)	POPTR_0003s05220	sp|Q9C821|PEK15_ARATH	Proline-rich receptor-like protein kinase PERK15 OS=Arabidopsis thaliana GN=PERK15 PE=1 SV=1	AT1G52290.1	| Symbols: | Protein kinase superfamily protein | chr1:19470251-19472362 REVERSE LENGTH=509	LOC_Os05g12680.1	protein|retrotransposon protein, putative, unclassified, expressed	IMGA|Medtr5g019940.1	Cysteine-rich receptor-like protein kinase chr5 7305562-7308897 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0051510|regulation of unidimensional cell growth	GO:0004672|protein kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_08130	A	A1S	Potri.003G053400	Potri.003G053400(AS)	POPTR_0003s05230	sp|O24461|RAB7_PRUAR	Ras-related protein Rab7 OS=Prunus armeniaca PE=2 SV=1	AT1G52280.1	| Symbols: AtRABG3d, RABG3d | RAB GTPase homolog G3D | chr1:19468150-19469449 REVERSE LENGTH=206	LOC_Os01g12730.1	protein|ras-related protein, putative, expressed	IMGA|Medtr5g013900.1	Ras-related protein Rab-6 chr5 4324275-4328602 E EGN_Mt100125 20111014	GO:0007264|small GTPase mediated signal transduction GO:0015031|protein transport GO:0016192|vesicle-mediated transport	GO:0005525|GTP binding	GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0005886|plasma membrane
pt2_08131	A	A1S	Potri.003G053500	Potri.003G053500(AS)	POPTR_0003s05240	NA	NA	AT1G15230.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 26 Blast hits to 26 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:5242729-5243196 REVERSE LENGTH=155	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005737|cytoplasm
pt2_08132	A	A1S	Potri.003G053600	Potri.003G053600(AS)	POPTR_0003s05250	NA	NA	AT1G15260.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G16070.1); Has 28 Blast hits to 28 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:5249834-5250370 FORWARD LENGTH=178	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_08133	A	A1S	Potri.003G053700	Potri.003G053700(AS)	POPTR_0003s05260	sp|O81755|PER48_ARATH	Putative Peroxidase 48 OS=Arabidopsis thaliana GN=PER48 PE=2 SV=3	AT4G33870.1	| Symbols: | Peroxidase superfamily protein | chr4:16234670-16236492 REVERSE LENGTH=401	LOC_Os01g51550.1	protein|peroxidase family protein, expressed	IMGA|Medtr1g025980.1	Peroxidase chr1 8471540-8470286 H EGN_Mt100125 20111014	GO:0006979|response to oxidative stress GO:0055114|oxidation-reduction process	GO:0004601|peroxidase activity GO:0020037|heme binding	GO:0005576|extracellular region
pt2_08134	A	A2S	Potri.003G053800	Potri.003G053800(AS) Potri.001G182300(BS)	POPTR_0003s05270	sp|Q95LP1|KIF2C_MACFA	Kinesin-like protein KIF2C OS=Macaca fascicularis GN=KIF2C PE=2 SV=1	AT3G16060.1	| Symbols: | ATP binding microtubule motor family protein | chr3:5447503-5451196 FORWARD LENGTH=684	LOC_Os01g43580.1	protein|kinesin motor domain containing protein, putative, expressed	IMGA|contig_49486_1.1	Kinesin like protein contig_49486 826-6258 E PREDN 20111014	NA	GO:0003777|microtubule motor activity GO:0005524|ATP binding	GO:0005634|nucleus GO:0005739|mitochondrion GO:0005886|plasma membrane
pt2_08135	A	A1S	Potri.003G053900	Potri.003G053900(AS)	POPTR_0003s05280	sp|Q08DK7|MCATL_BOVIN	Mitochondrial carnitine/acylcarnitine carrier protein CACL OS=Bos taurus GN=SLC25A29 PE=2 SV=1	AT1G79900.1	| Symbols: ATMBAC2, BAC2 | Mitochondrial substrate carrier family protein | chr1:30052524-30053599 REVERSE LENGTH=296	LOC_Os01g12520.1	protein|mitochondrial carrier protein, putative, expressed	IMGA|Medtr5g030530.1	Mitochondrial carnitine/acylcarnitine carrier-like protein chr5 12590466-12586303 E EGN_Mt100125 20111014	GO:0006561|proline biosynthetic process GO:0006810|transport GO:0006839|mitochondrial transport GO:0006972|hyperosmotic response GO:0043091|L-arginine import	GO:0000064|L-ornithine transmembrane transporter activity GO:0005476|carnitine:acyl carnitine antiporter activity	GO:0005739|mitochondrion GO:0005743|mitochondrial inner membrane
pt2_08136	B	B1S	Potri.003G054000	Potri.003G054000(BS)	POPTR_0003s05290	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_08137	A	A2S	Potri.003G054100	Potri.003G054100(AS) Potri.003G054400(AS)	POPTR_0003s05300	sp|Q9C9I2|ERF21_ARATH	Ethylene-responsive transcription factor ERF021 OS=Arabidopsis thaliana GN=ERF021 PE=2 SV=1	AT1G71450.1	| Symbols: | Integrase-type DNA-binding superfamily protein | chr1:26927088-26927639 FORWARD LENGTH=183	LOC_Os11g13840.1	protein|AP2 domain containing protein, expressed	IMGA|Medtr5g008550.1	Ethylene-responsive transcription factor chr5 1578153-1577572 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_08138	A	A4S	Potri.003G054200	Potri.003G054200(AS) Potri.003G054500(BS) Potri.001G181300(DS) Potri.003G054700(DS)	POPTR_0003s05310	sp|Q54I39|IST1L_DICDI	IST1-like protein OS=Dictyostelium discoideum GN=DDB_G0289029 PE=3 SV=1	AT1G79910.1	| Symbols: | Regulator of Vps4 activity in the MVB pathway protein | chr1:30055050-30057011 FORWARD LENGTH=381	LOC_Os02g06430.1	protein|DUF292 domain containing protein, expressed	IMGA|Medtr1g110690.1	IST1-like protein chr1 32671624-32676007 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_08139	A	A2S	Potri.003G054600	Potri.003G054600(AS) Potri.003G054300(AS)	POPTR_0003s05320	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_08140	B	B1S	Potri.003G054700	Potri.003G054700(BS)	POPTR_0003s05340	NA	NA	AT1G79910.2	| Symbols: | Regulator of Vps4 activity in the MVB pathway protein | chr1:30055088-30057011 FORWARD LENGTH=367	LOC_Os02g06430.1	protein|DUF292 domain containing protein, expressed	IMGA|Medtr1g110690.1	IST1-like protein chr1 32671624-32676007 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_08141	C	C1S	Potri.003G054800	Potri.003G054800(CS)	NA	NA	AT1G52320.4	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT5G25590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr1:19485399-19487204 FORWARD LENGTH=472	LOC_Os05g32760.1	protein|BZIP protein, putative, expressed	IMGA|Medtr5g022530.1	hypothetical protein chr5 8631873-8636502 E EGN_Mt100125 20111014	GO:0006306|DNA methylation GO:0006346|methylation-dependent chromatin silencing GO:0006487|protein N-linked glycosylation GO:0006499|N-terminal protein myristoylation GO:0009640|photomorphogenesis GO:0009909|regulation of flower development GO:0010388|cullin deneddylation GO:0016567|protein ubiquitination GO:0016570|histone modification GO:0016571|histone methylation GO:0016579|protein deubiquitination GO:0031047|gene silencing by RNA GO:0031048|chromatin silencing by small RNA GO:0045893|positive regulation of transcription, DNA-dependent GO:0048449|floral organ formation GO:0051567|histone H3-K9 methylation	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_08142	B	B1S	Potri.003G054800	Potri.003G054800(BS)	POPTR_0003s05360	NA	NA	AT1G52320.4	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT5G25590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr1:19485399-19487204 FORWARD LENGTH=472	LOC_Os05g32760.1	protein|BZIP protein, putative, expressed	IMGA|Medtr5g022530.1	hypothetical protein chr5 8631873-8636502 E EGN_Mt100125 20111014	GO:0006306|DNA methylation GO:0006346|methylation-dependent chromatin silencing GO:0006487|protein N-linked glycosylation GO:0006499|N-terminal protein myristoylation GO:0009640|photomorphogenesis GO:0009909|regulation of flower development GO:0010388|cullin deneddylation GO:0016567|protein ubiquitination GO:0016570|histone modification GO:0016571|histone methylation GO:0016579|protein deubiquitination GO:0031047|gene silencing by RNA GO:0031048|chromatin silencing by small RNA GO:0045893|positive regulation of transcription, DNA-dependent GO:0048449|floral organ formation GO:0051567|histone H3-K9 methylation	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_08143	A	A1S	Potri.003G054900	Potri.003G054900(AS)	POPTR_0003s05370	sp|P31583|RHN1_NICPL	Ras-related protein RHN1 OS=Nicotiana plumbaginifolia GN=RHN1 PE=2 SV=1	AT4G19640.1	| Symbols: ARA7, ARA-7, ATRABF2B, ATRAB5B, RABF2B, ATRAB-F2B, RAB-F2B | Ras-related small GTP-binding family protein | chr4:10687441-10689449 REVERSE LENGTH=200	LOC_Os06g47260.2	protein|ras-related protein, putative, expressed	IMGA|Medtr5g076590.1	GTP binding protein chr5 31676321-31681732 F EGN_Mt100125 20111014	GO:0006944|cellular membrane fusion GO:0007264|small GTPase mediated signal transduction GO:0010200|response to chitin GO:0015031|protein transport GO:0016192|vesicle-mediated transport GO:0048193|Golgi vesicle transport	GO:0005515|protein binding GO:0005525|GTP binding	GO:0005768|endosome GO:0005769|early endosome GO:0005783|endoplasmic reticulum GO:0005886|plasma membrane
pt2_08144	A	A1S	Potri.003G055000	Potri.003G055000(AS)	POPTR_0003s05380	NA	NA	AT1G52330.1	| Symbols: | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | chr1:19488962-19489763 FORWARD LENGTH=214	LOC_Os03g48950.2	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_08145	A	A1S	Potri.003G055100	Potri.003G055100(AS)	POPTR_0003s05390	NA	NA	NA	NA	LOC_Os01g08670.1	protein|expressed protein	NA	NA	GO:0002237|response to molecule of bacterial origin GO:0002679|respiratory burst involved in defense response GO:0006979|response to oxidative stress GO:0008150|biological_process GO:0009611|response to wounding GO:0010200|response to chitin GO:0030968|endoplasmic reticulum unfolded protein response GO:0035556|intracellular signal transduction GO:0050832|defense response to fungus	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0005886|plasma membrane
pt2_08146	A	A1S	Potri.003G055200	Potri.003G055200(AS)	POPTR_0003s05400	NA	NA	AT1G52343.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr1:19494226-19495718 REVERSE LENGTH=249	NA	NA	NA	NA	NA	NA	GO:0005739|mitochondrion
pt2_08147	A	A1S	Potri.003G055300	Potri.003G055300(AS)	POPTR_0003s05410	NA	NA	NA	NA	NA	NA	NA	NA	GO:0045892|negative regulation of transcription, DNA-dependent	NA	GO:0005634|nucleus
pt2_08148	D	D1S	Potri.003G055400	Potri.003G055400(DS)	POPTR_0003s05420	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005737|cytoplasm
pt2_08149	A	A1S	Potri.003G055600	Potri.003G055600(AS)	POPTR_0003s05430	sp|Q9LRR4|R13L1_ARATH	Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana GN=RPPL1 PE=2 SV=1	AT3G14470.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr3:4857940-4861104 FORWARD LENGTH=1054	LOC_Os05g41290.1	protein|disease resistance RPP13-like protein 1, putative, expressed	IMGA|Medtr5g095910.1	NB-LRR type disease resistance protein Rps1-k-2 chr5 40893619-40897389 H EGN_Mt100125 20111014	GO:0006952|defense response GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process	GO:0005515|protein binding GO:0043531|ADP binding	GO:0005576|extracellular region
pt2_08150	A	A1S	Potri.003G055700	Potri.003G055700(AS)	POPTR_0003s05440	sp|Q16X92|RTEL1_AEDAE	Regulator of telomere elongation helicase 1 homolog OS=Aedes aegypti GN=AAEL008960 PE=3 SV=1	AT1G79950.1	| Symbols: | RAD3-like DNA-binding helicase protein | chr1:30073580-30079537 FORWARD LENGTH=1040	LOC_Os01g40980.2	protein|helicase, putative, expressed	NA	NA	GO:0006139|nucleobase-containing compound metabolic process GO:0006346|methylation-dependent chromatin silencing GO:0006355|regulation of transcription, DNA-dependent GO:0007267|cell-cell signaling GO:0009616|virus induced gene silencing GO:0009855|determination of bilateral symmetry GO:0010014|meristem initiation GO:0010073|meristem maintenance GO:0010267|production of ta-siRNAs involved in RNA interference GO:0016246|RNA interference GO:0035196|production of miRNAs involved in gene silencing by miRNA	GO:0003676|nucleic acid binding GO:0003677|DNA binding GO:0004003|ATP-dependent DNA helicase activity GO:0005524|ATP binding GO:0008026|ATP-dependent helicase activity GO:0016817|hydrolase activity, acting on acid anhydrides GO:0016818|hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	GO:0005634|nucleus GO:0005739|mitochondrion
pt2_08151	A	A2S	Potri.003G055800	Potri.003G055800(AS) Potri.001G180100(DS)	POPTR_0003s05450	sp|F4HQD4|HSP7P_ARATH	Heat shock 70 kDa protein 15 OS=Arabidopsis thaliana GN=HSP70-15 PE=1 SV=1	AT1G79920.1	| Symbols: | Heat shock protein 70 (Hsp 70) family protein | chr1:30058935-30062224 REVERSE LENGTH=831	LOC_Os01g08560.1	protein|DnaK family protein, putative, expressed	IMGA|Medtr5g092570.1	97 kDa heat shock protein chr5 39390729-39395142 E EGN_Mt100125 20111014	GO:0006457|protein folding GO:0009408|response to heat GO:0046686|response to cadmium ion	GO:0005524|ATP binding	GO:0005618|cell wall GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_08152	A	A1S	Potri.003G055900	Potri.003G055900(AS)	POPTR_0003s05460	sp|Q9FGK3|MO25N_ARATH	Putative MO25-like protein At5g47540 OS=Arabidopsis thaliana GN=At5g47540 PE=2 SV=1	AT5G47540.1	| Symbols: | Mo25 family protein | chr5:19283265-19285328 REVERSE LENGTH=343	LOC_Os07g39630.1	protein|calcium-binding protein, putative, expressed	NA	NA	GO:0008150|biological_process	NA	GO:0005737|cytoplasm
pt2_08153	A	A1S	Potri.003G056000	Potri.003G056000(AS)	POPTR_0003s05470	NA	NA	AT3G24490.1	| Symbols: | Alcohol dehydrogenase transcription factor Myb/SANT-like family protein | chr3:8911022-8912023 FORWARD LENGTH=333	LOC_Os01g52090.1	protein|transcription factor like protein, putative, expressed	IMGA|contig_83346_1.1	Transcription regulation protein contig_83346 3217-606 E PREDN 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0043687|post-translational protein modification GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_08154	A	A1S	Potri.003G056100	Potri.003G056100(AS)	POPTR_0003s05480	sp|Q55E69|SYS1_DICDI	Protein SYS1 homolog OS=Dictyostelium discoideum GN=sys1 PE=3 SV=1	AT1G79990.4	| Symbols: | structural molecules | chr1:30084522-30085194 FORWARD LENGTH=152	LOC_Os01g41040.1	protein|SCF apoptosis response protein, putative, expressed	NA	NA	GO:0006094|gluconeogenesis GO:0006661|phosphatidylinositol biosynthetic process GO:0006886|intracellular protein transport GO:0007010|cytoskeleton organization GO:0010498|proteasomal protein catabolic process GO:0016192|vesicle-mediated transport	GO:0005198|structural molecule activity	GO:0000139|Golgi membrane GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane GO:0030117|membrane coat GO:0030126|COPI vesicle coat
pt2_08155	A	A1S	Potri.003G056200	Potri.003G056200(AS)	POPTR_0003s05490	sp|Q9LW86|SUT34_ARATH	Probable sulfate transporter 3.4 OS=Arabidopsis thaliana GN=SULTR3;4 PE=2 SV=1	AT3G15990.1	| Symbols: SULTR3;4 | sulfate transporter 3;4 | chr3:5427081-5430679 FORWARD LENGTH=653	LOC_Os06g05160.1	protein|sulfate transporter, putative, expressed	IMGA|Medtr1g071530.1	Sulfate/bicarbonate/oxalate exchanger and transporter sat-1 chr1 17673194-17680143 E EGN_Mt100125 20111014	GO:0006810|transport GO:0008272|sulfate transport GO:0055085|transmembrane transport	GO:0005215|transporter activity GO:0008271|secondary active sulfate transmembrane transporter activity GO:0015116|sulfate transmembrane transporter activity	GO:0009506|plasmodesma GO:0016020|membrane GO:0016021|integral to membrane
pt2_08156	A	A2S	Potri.003G056300	Potri.003G056300(AS) Potri.001G179200(BS)	POPTR_0003s05500	sp|Q9C827|COB22_ARATH	Coatomer subunit beta'-2 OS=Arabidopsis thaliana GN=At1g52360 PE=2 SV=1	AT1G52360.1	| Symbols: | Coatomer, beta' subunit | chr1:19499282-19505397 FORWARD LENGTH=926	LOC_Os02g11830.2	protein|coatomer subunit beta, putative, expressed	IMGA|Medtr1g011610.1	Transcriptional corepressor LEUNIG chr1 2436342-2425793 E EGN_Mt100125 20111014	GO:0006094|gluconeogenesis GO:0006886|intracellular protein transport GO:0007010|cytoskeleton organization GO:0010498|proteasomal protein catabolic process GO:0016192|vesicle-mediated transport	GO:0005198|structural molecule activity	GO:0005737|cytoplasm GO:0005829|cytosol GO:0030117|membrane coat GO:0030126|COPI vesicle coat
pt2_08157	A	A1S	Potri.003G056400	Potri.003G056400(AS)	POPTR_0003s05510	NA	NA	AT1G52380.1	| Symbols: | NUP50 (Nucleoporin 50 kDa) protein | chr1:19509979-19511301 FORWARD LENGTH=440	LOC_Os05g28190.1	protein|ranBP1 domain containing protein, expressed	NA	NA	GO:0046907|intracellular transport	GO:0005515|protein binding	GO:0005634|nucleus GO:0005643|nuclear pore GO:0005829|cytosol
pt2_08158	A	A1S	Potri.003G056500	Potri.003G056500(AS)	POPTR_0003s05520	NA	NA	AT1G15280.2	| Symbols: | CASC3/Barentsz eIF4AIII binding | chr1:5252538-5256214 FORWARD LENGTH=585	LOC_Os05g45830.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_08159	A	A2S	Potri.003G056600	Potri.003G056600(AS) Potri.001G178200(DS)	POPTR_0003s05530	NA	NA	AT1G15660.1	| Symbols: CENP-C | centromere protein C | chr1:5381230-5385057 FORWARD LENGTH=705	LOC_Os01g43050.1	protein|CENP-C1, putative, expressed	NA	NA	GO:0000280|nuclear division GO:0006260|DNA replication GO:0006275|regulation of DNA replication GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0008150|biological_process GO:0008283|cell proliferation GO:0010389|regulation of G2/M transition of mitotic cell cycle GO:0016572|histone phosphorylation GO:0042023|DNA endoreduplication GO:0051225|spindle assembly GO:0051567|histone H3-K9 methylation	GO:0003674|molecular_function	GO:0000775|chromosome, centromeric region GO:0005634|nucleus
pt2_08160	A	A1S	Potri.003G056600	Potri.003G056600(AS)	POPTR_0003s05530	NA	NA	AT1G15660.1	| Symbols: CENP-C | centromere protein C | chr1:5381230-5385057 FORWARD LENGTH=705	LOC_Os01g43050.1	protein|CENP-C1, putative, expressed	NA	NA	GO:0000280|nuclear division GO:0006260|DNA replication GO:0006275|regulation of DNA replication GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0008150|biological_process GO:0008283|cell proliferation GO:0010389|regulation of G2/M transition of mitotic cell cycle GO:0016572|histone phosphorylation GO:0042023|DNA endoreduplication GO:0051225|spindle assembly GO:0051567|histone H3-K9 methylation	GO:0003674|molecular_function	GO:0000775|chromosome, centromeric region GO:0005634|nucleus
pt2_08161	A	A1S	Potri.003G056700	Potri.003G056700(AS)	POPTR_0003s05540	sp|Q6N069|NAA16_HUMAN	N-alpha-acetyltransferase 16, NatA auxiliary subunit OS=Homo sapiens GN=NAA16 PE=1 SV=2	AT1G80410.1	| Symbols: EMB2753 | tetratricopeptide repeat (TPR)-containing protein | chr1:30227963-30234832 REVERSE LENGTH=897	LOC_Os01g43030.1	protein|tetratricopeptide repeat domain containing protein, expressed	NA	NA	GO:0009793|embryo development ending in seed dormancy GO:0010228|vegetative to reproductive phase transition of meristem	NA	GO:0005634|nucleus GO:0005829|cytosol GO:0009506|plasmodesma GO:0016020|membrane
pt2_08162	A	A1S	Potri.003G056800	Potri.003G056800(AS)	POPTR_0003s05550	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_08163	A	A2S	Potri.003G056900	Potri.003G056900(AS) Potri.001G177500(AS)	POPTR_0003s05560	sp|P13088|AUX22_SOYBN	Auxin-induced protein AUX22 OS=Glycine max GN=AUX22 PE=2 SV=1	AT3G15540.1	| Symbols: IAA19, MSG2 | indole-3-acetic acid inducible 19 | chr3:5264100-5265378 FORWARD LENGTH=197	LOC_Os03g43400.1	protein|OsIAA11 - Auxin-responsive Aux/IAA gene family member, expressed	IMGA|Medtr1g093350.1	Auxin-induced protein chr1 26247246-26248612 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009630|gravitropism GO:0009638|phototropism GO:0009733|response to auxin stimulus GO:0009741|response to brassinosteroid stimulus GO:0048527|lateral root development GO:0080086|stamen filament development	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_08164	A	A2S	Potri.003G057000	Potri.003G057000(AS) Potri.003G057200(BS)	POPTR_0003s05570	sp|Q9SND9|Y3028_ARATH	Uncharacterized acetyltransferase At3g50280 OS=Arabidopsis thaliana GN=At3g50280 PE=1 SV=1	AT5G67150.1	| Symbols: | HXXXD-type acyl-transferase family protein | chr5:26795880-26797226 REVERSE LENGTH=448	LOC_Os08g01980.1	protein|transferase family protein, putative, expressed	IMGA|contig_63809_1.1	N-hydroxycinnamoyl/benzoyltransferase contig_63809 4614-3271 H PREDN 20111014	NA	GO:0016740|transferase activity GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_08165	A	A3S	Potri.003G057100	Potri.003G057100(AS) Potri.003G057200(BS) Potri.003G057000(BS)	POPTR_0003s05580	sp|Q9SND9|Y3028_ARATH	Uncharacterized acetyltransferase At3g50280 OS=Arabidopsis thaliana GN=At3g50280 PE=1 SV=1	AT3G50280.1	| Symbols: | HXXXD-type acyl-transferase family protein | chr3:18637854-18639185 FORWARD LENGTH=443	LOC_Os08g01980.1	protein|transferase family protein, putative, expressed	IMGA|contig_63809_1.1	N-hydroxycinnamoyl/benzoyltransferase contig_63809 4614-3271 H PREDN 20111014	NA	GO:0016740|transferase activity GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_08166	A	A3S	Potri.003G057200	Potri.003G057200(AS) Potri.003G057000(BS) Potri.003G057100(DS)	POPTR_0003s05590	sp|Q9SND9|Y3028_ARATH	Uncharacterized acetyltransferase At3g50280 OS=Arabidopsis thaliana GN=At3g50280 PE=1 SV=1	AT5G67150.1	| Symbols: | HXXXD-type acyl-transferase family protein | chr5:26795880-26797226 REVERSE LENGTH=448	LOC_Os08g01980.1	protein|transferase family protein, putative, expressed	IMGA|contig_63809_1.1	N-hydroxycinnamoyl/benzoyltransferase contig_63809 4614-3271 H PREDN 20111014	NA	GO:0016740|transferase activity GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_08167	A	A2S	Potri.003G057200	Potri.003G057200(AS) Potri.003G057000(DS)	POPTR_0003s05590	sp|Q9SND9|Y3028_ARATH	Uncharacterized acetyltransferase At3g50280 OS=Arabidopsis thaliana GN=At3g50280 PE=1 SV=1	AT5G67150.1	| Symbols: | HXXXD-type acyl-transferase family protein | chr5:26795880-26797226 REVERSE LENGTH=448	LOC_Os08g01980.1	protein|transferase family protein, putative, expressed	IMGA|contig_63809_1.1	N-hydroxycinnamoyl/benzoyltransferase contig_63809 4614-3271 H PREDN 20111014	NA	GO:0016740|transferase activity GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_08168	A	A1S	Potri.003G057300	Potri.003G057300(AS)	POPTR_0003s05600	sp|Q76CU2|PDR1_TOBAC	Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum GN=PDR1 PE=2 SV=1	AT1G15520.1	| Symbols: PDR12, ATPDR12, ABCG40, ATABCG40 | pleiotropic drug resistance 12 | chr1:5331993-5338175 REVERSE LENGTH=1423	LOC_Os09g16330.2	protein|pleiotropic drug resistance protein, putative, expressed	IMGA|Medtr5g070320.1	Pleiotropic drug resistance ABC transporter family protein chr5 28781263-28793818 H EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0002831|regulation of response to biotic stimulus GO:0006612|protein targeting to membrane GO:0006855|drug transmembrane transport GO:0007165|signal transduction GO:0009414|response to water deprivation GO:0009595|detection of biotic stimulus GO:0009607|response to biotic stimulus GO:0009697|salicylic acid biosynthetic process GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009751|response to salicylic acid stimulus GO:0009753|response to jasmonic acid stimulus GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010193|response to ozone GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0015692|lead ion transport GO:0031348|negative regulation of defense response GO:0042538|hyperosmotic salinity response GO:0042742|defense response to bacterium GO:0043069|negative regulation of programmed cell death GO:0043900|regulation of multi-organism process GO:0046865|terpenoid transport GO:0050832|defense response to fungus GO:0080168|abscisic acid transport	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0005886|plasma membrane
pt2_08169	A	A1S	Potri.003G057400	Potri.003G057400(AS)	POPTR_0003s05610	sp|Q39103|G3OX1_ARATH	Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA4 PE=1 SV=2	AT1G15550.1	| Symbols: GA4, ATGA3OX1, GA3OX1 | gibberellin 3-oxidase 1 | chr1:5344569-5346078 REVERSE LENGTH=358	LOC_Os01g08220.1	protein|gibberellin 3-beta-dioxygenase 2-2, putative, expressed	IMGA|Medtr5g055680.1	Protein SRG1 chr5 22384306-22387839 F EGN_Mt100125 20111014	GO:0009639|response to red or far red light GO:0009686|gibberellin biosynthetic process GO:0009739|response to gibberellin stimulus GO:0009740|gibberellic acid mediated signaling pathway GO:0010114|response to red light GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0008134|transcription factor binding GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors GO:0016707|gibberellin 3-beta-dioxygenase activity	GO:0005737|cytoplasm
pt2_08170	A	A1S	Potri.003G057500	Potri.003G057500(AS)	POPTR_0003s05620	sp|Q9LTT8|VCS_ARATH	Enhancer of mRNA-decapping protein 4 OS=Arabidopsis thaliana GN=VCS PE=1 SV=1	AT3G13300.2	| Symbols: VCS | Transducin/WD40 repeat-like superfamily protein | chr3:4304085-4309949 FORWARD LENGTH=1309	LOC_Os06g19660.2	protein|WD domain, G-beta repeat domain containing protein, expressed	NA	NA	GO:0006402|mRNA catabolic process GO:0009791|post-embryonic development GO:0009965|leaf morphogenesis GO:0010071|root meristem specification GO:0010072|primary shoot apical meristem specification GO:0031087|deadenylation-independent decapping of nuclear-transcribed mRNA GO:0071365|cellular response to auxin stimulus	GO:0000166|nucleotide binding GO:0005515|protein binding GO:0042803|protein homodimerization activity	GO:0000932|cytoplasmic mRNA processing body GO:0005634|nucleus GO:0005829|cytosol
pt2_08171	A	A1S	Potri.003G057600	Potri.003G057600(AS)	POPTR_0003s05630	sp|Q9LTT8|VCS_ARATH	Enhancer of mRNA-decapping protein 4 OS=Arabidopsis thaliana GN=VCS PE=1 SV=1	AT3G13300.1	| Symbols: VCS | Transducin/WD40 repeat-like superfamily protein | chr3:4304085-4309949 FORWARD LENGTH=1344	NA	NA	NA	NA	GO:0006402|mRNA catabolic process GO:0009791|post-embryonic development GO:0009965|leaf morphogenesis GO:0010071|root meristem specification GO:0010072|primary shoot apical meristem specification GO:0031087|deadenylation-independent decapping of nuclear-transcribed mRNA GO:0071365|cellular response to auxin stimulus	GO:0000166|nucleotide binding GO:0005515|protein binding GO:0042803|protein homodimerization activity	GO:0000932|cytoplasmic mRNA processing body GO:0005634|nucleus GO:0005829|cytosol
pt2_08172	A	A1S	Potri.003G057700	Potri.003G057700(AS)	POPTR_0003s05640	NA	NA	AT4G14746.1	| Symbols: | CONTAINS InterPro DOMAIN/s: EGF-like (InterPro:IPR006210); Has 259 Blast hits to 234 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 184; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). | chr4:8462720-8464326 REVERSE LENGTH=212	LOC_Os11g37210.1	protein|MTN26L5 - MtN26 family protein precursor, expressed	NA	NA	GO:0008150|biological_process	NA	GO:0031225|anchored to membrane
pt2_08173	A	A1S	Potri.003G057800	Potri.003G057800(AS)	POPTR_0003s05650	sp|Q9SEX2|KTNA1_ARATH	Katanin p60 ATPase-containing subunit OS=Arabidopsis thaliana GN=AAA1 PE=1 SV=1	AT1G80350.1	| Symbols: ERH3, AAA1, FRA2, LUE1, ATKTN1, KTN1, FRC2, BOT1, FTR | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:30205499-30208050 REVERSE LENGTH=523	LOC_Os01g49000.1	protein|katanin p60 ATPase-containing subunit, putative, expressed	IMGA|Medtr1g088750.1	Katanin p60 ATPase-containing subunit A-like protein chr1 24184365-24173384 E EGN_Mt100125 20111014	GO:0000226|microtubule cytoskeleton organization GO:0009825|multidimensional cell growth GO:0010091|trichome branching GO:0043622|cortical microtubule organization	GO:0000166|nucleotide binding GO:0005515|protein binding GO:0005524|ATP binding GO:0017111|nucleoside-triphosphatase activity	GO:0005737|cytoplasm
pt2_08174	A	A1S	Potri.003G057800	Potri.003G057800(AS)	POPTR_0003s05650	sp|Q9SEX2|KTNA1_ARATH	Katanin p60 ATPase-containing subunit OS=Arabidopsis thaliana GN=AAA1 PE=1 SV=1	AT1G80350.1	| Symbols: ERH3, AAA1, FRA2, LUE1, ATKTN1, KTN1, FRC2, BOT1, FTR | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:30205499-30208050 REVERSE LENGTH=523	LOC_Os01g49000.1	protein|katanin p60 ATPase-containing subunit, putative, expressed	IMGA|Medtr1g088750.1	Katanin p60 ATPase-containing subunit A-like protein chr1 24184365-24173384 E EGN_Mt100125 20111014	GO:0000226|microtubule cytoskeleton organization GO:0009825|multidimensional cell growth GO:0010091|trichome branching GO:0043622|cortical microtubule organization	GO:0000166|nucleotide binding GO:0005515|protein binding GO:0005524|ATP binding GO:0017111|nucleoside-triphosphatase activity	GO:0005737|cytoplasm
pt2_08175	C	C2S	Potri.003G057900	Potri.003G057900(CS) Potri.003G057800(CA)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_08176	A	A1S	Potri.003G058000	Potri.003G058000(AS)	POPTR_0003s05670	NA	NA	AT1G80360.1	| Symbols: | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein | chr1:30208736-30210643 REVERSE LENGTH=394	LOC_Os01g08270.1	protein|aminotransferase, classes I and II, domain containing protein, expressed	NA	NA	GO:0006530|asparagine catabolic process GO:0009058|biosynthetic process GO:0019465|aspartate transamidation GO:0019554|glutamate catabolic process to oxaloacetate	GO:0003824|catalytic activity GO:0008483|transaminase activity GO:0016740|transferase activity GO:0030170|pyridoxal phosphate binding	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_08177	G	G1	NA	NA	POPTR_0003s05680	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_08178	A	A1S	Potri.003G058200	Potri.003G058200(AS)	POPTR_0003s05690	sp|Q9C968|CCA24_ARATH	Cyclin-A2-4 OS=Arabidopsis thaliana GN=CYCA2-4 PE=2 SV=1	AT1G80370.1	| Symbols: CYCA2;4 | Cyclin A2;4 | chr1:30214694-30216861 FORWARD LENGTH=461	LOC_Os12g31810.1	protein|cyclin, putative, expressed	IMGA|Medtr1g011470.1	Cyclin chr1 2363745-2358343 H EGN_Mt100125 20111014	GO:0000079|regulation of cyclin-dependent protein kinase activity GO:0006275|regulation of DNA replication GO:0008283|cell proliferation GO:0010374|stomatal complex development GO:0010389|regulation of G2/M transition of mitotic cell cycle GO:0042023|DNA endoreduplication GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0043248|proteasome assembly GO:0051510|regulation of unidimensional cell growth GO:0051726|regulation of cell cycle GO:0051788|response to misfolded protein	GO:0016538|cyclin-dependent protein kinase regulator activity GO:0019901|protein kinase binding	GO:0005634|nucleus
pt2_08179	A	A1A	Potri.003G058300	Potri.003G058300(AA)	POPTR_0003s05700	sp|Q9ZQE5|PP153_ARATH	Pentatricopeptide repeat-containing protein At2g15690 OS=Arabidopsis thaliana GN=PCMP-H66 PE=2 SV=2	AT2G15690.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr2:6831855-6833594 REVERSE LENGTH=579	LOC_Os04g09530.1	protein|pentatricopeptide, putative, expressed	IMGA|Medtr5g042450.1	Pentatricopeptide repeat protein chr5 18250153-18245750 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_08180	A	A1S	Potri.003G058400	Potri.003G058400(AS)	POPTR_0003s05710	sp|F6HQ26|RU1C_VITVI	U1 small nuclear ribonucleoprotein C OS=Vitis vinifera GN=VIT_07s0104g01170 PE=3 SV=1	AT4G03120.1	| Symbols: | C2H2 and C2HC zinc fingers superfamily protein | chr4:1385747-1387331 FORWARD LENGTH=207	LOC_Os02g16640.1	protein|proline-rich protein HaeIII subfamily 1 precursor, putative, expressed	NA	NA	NA	GO:0003676|nucleic acid binding GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_08181	A	A1S	Potri.003G058500	Potri.003G058500(AS)	POPTR_0003s05720	sp|Q944I4|GLYK_ARATH	D-glycerate 3-kinase, chloroplastic OS=Arabidopsis thaliana GN=GLYK PE=1 SV=2	AT1G80380.2	| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:30217332-30219784 FORWARD LENGTH=456	LOC_Os01g48990.2	protein|uncharacterized kinase mug58, putative, expressed	NA	NA	GO:0008152|metabolic process GO:0009853|photorespiration	GO:0005524|ATP binding GO:0008887|glycerate kinase activity GO:0016301|kinase activity	GO:0005634|nucleus GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope
pt2_08182	A	A1S	Potri.003G058600	Potri.003G058600(AS)	POPTR_0003s05730	NA	NA	AT3G15550.1	| Symbols: | unknown protein; Has 25732 Blast hits to 16979 proteins in 961 species: Archae - 144; Bacteria - 1801; Metazoa - 12681; Fungi - 1868; Plants - 912; Viruses - 94; Other Eukaryotes - 8232 (source: NCBI BLink). | chr3:5267351-5270095 FORWARD LENGTH=729	LOC_Os01g08150.1	protein|expressed protein	NA	NA	GO:0000226|microtubule cytoskeleton organization GO:0000724|double-strand break repair via homologous recombination GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0006346|methylation-dependent chromatin silencing GO:0008150|biological_process GO:0031047|gene silencing by RNA GO:0031048|chromatin silencing by small RNA GO:0031507|heterochromatin assembly GO:0045787|positive regulation of cell cycle GO:0048451|petal formation GO:0048453|sepal formation GO:0051567|histone H3-K9 methylation	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_08183	A	A1S	Potri.003G058700	Potri.003G058700(AS)	POPTR_0003s05740	sp|Q9M9E2|PPR45_ARATH	Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2 SV=1	AT1G15510.1	| Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:5329111-5331711 FORWARD LENGTH=866	LOC_Os05g49920.1	protein|pentatricopeptide, putative, expressed	IMGA|Medtr1g071240.1	Pentatricopeptide repeat-containing protein chr1 17511913-17505644 H EGN_Mt100125 20111014	GO:0009416|response to light stimulus GO:0009451|RNA modification GO:0009658|chloroplast organization GO:0040007|growth	NA	GO:0009507|chloroplast
pt2_08184	A	A1S	Potri.003G058800	Potri.003G058800(AS)	POPTR_0003s05750	sp|Q9FMF5|RPT3_ARATH	Root phototropism protein 3 OS=Arabidopsis thaliana GN=RPT3 PE=1 SV=2	AT3G15570.1	| Symbols: | Phototropic-responsive NPH3 family protein | chr3:5270267-5271700 REVERSE LENGTH=452	LOC_Os05g08530.1	protein|phototropic-responsive NPH3 family protein, putative, expressed	IMGA|Medtr5g032780.1	BTB/POZ domain-containing protein chr5 13701861-13705690 E EGN_Mt100125 20111014	GO:0000023|maltose metabolic process GO:0009416|response to light stimulus GO:0019252|starch biosynthetic process	GO:0004871|signal transducer activity	GO:0005575|cellular_component GO:0005886|plasma membrane
pt2_08185	A	A1S	Potri.003G058900	Potri.003G058900(AS)	POPTR_0003s05760	sp|O24381|TLC1_SOLTU	Plastidic ATP/ADP-transporter OS=Solanum tuberosum PE=2 SV=2	AT1G80300.1	| Symbols: NTT1, ATNTT1 | nucleotide transporter 1 | chr1:30191954-30194280 FORWARD LENGTH=624	LOC_Os02g11740.1	protein|plastidic ATP/ADP-transporter, putative, expressed	NA	NA	NA	GO:0005471|ATP:ADP antiporter activity GO:0005524|ATP binding	GO:0009507|chloroplast GO:0009536|plastid GO:0009941|chloroplast envelope GO:0016020|membrane GO:0016021|integral to membrane
pt2_08186	A	A2S	Potri.003G059000	Potri.003G059000(AS) Potri.003G059100(BS)	POPTR_0003s05770	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_08187	A	A2S	Potri.003G059100	Potri.003G059100(AS) Potri.003G059000(AS)	POPTR_0003s05775	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_08188	A	A1S	Potri.003G059200	Potri.003G059200(AS)	POPTR_0003s05780	sp|Q8R431|MGLL_RAT	Monoglyceride lipase OS=Rattus norvegicus GN=Mgll PE=1 SV=1	AT1G52760.1	| Symbols: LysoPL2 | lysophospholipase 2 | chr1:19651378-19652576 FORWARD LENGTH=332	LOC_Os02g11720.1	protein|lipase, putative, expressed	IMGA|Medtr1g095110.1	Monoglyceride lipase chr1 27112088-27110884 E EGN_Mt100125 20111014	GO:0006979|response to oxidative stress GO:0010043|response to zinc ion GO:0042542|response to hydrogen peroxide GO:0046686|response to cadmium ion	GO:0003846|2-acylglycerol O-acyltransferase activity GO:0004622|lysophospholipase activity GO:0016787|hydrolase activity	GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0009507|chloroplast
pt2_08189	A	A1S	Potri.003G059300	Potri.003G059300(AS)	POPTR_0003s05800	sp|Q8TEQ8|PIGO_HUMAN	GPI ethanolamine phosphate transferase 3 OS=Homo sapiens GN=PIGO PE=2 SV=3	AT5G17250.1	| Symbols: | Alkaline-phosphatase-like family protein | chr5:5668993-5673516 REVERSE LENGTH=925	LOC_Os10g08940.1	protein|expressed protein	IMGA|Medtr5g032210.1	GPI ethanolamine phosphate transferase chr5 13411061-13421641 E EGN_Mt100125 20111014	GO:0006506|GPI anchor biosynthetic process GO:0008152|metabolic process	GO:0003824|catalytic activity GO:0016740|transferase activity	NA
pt2_08190	A	A2S	Potri.003G059400	Potri.003G059400(AS) Potri.001G174900(DS)	POPTR_0003s05810	NA	NA	AT1G15490.1	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr1:5320859-5323422 REVERSE LENGTH=648	LOC_Os01g45960.1	protein|hydrolase, alpha/beta fold family domain containing protein, expressed	NA	NA	NA	GO:0016787|hydrolase activity	GO:0005737|cytoplasm
pt2_08191	A	A2S	Potri.003G059500	Potri.003G059500(AS) Potri.001G174600(BS)	POPTR_0003s05820	sp|Q54LT8|STRAP_DICDI	Serine-threonine kinase receptor-associated protein OS=Dictyostelium discoideum GN=strap PE=3 SV=1	AT3G15610.1	| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr3:5291076-5292796 REVERSE LENGTH=341	LOC_Os02g11060.1	protein|WD domain, G-beta repeat domain containing protein, expressed	IMGA|Medtr5g085250.1	E3 ubiquitin-protein ligase COP1 chr5 35784611-35795521 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0000166|nucleotide binding	GO:0005737|cytoplasm GO:0005829|cytosol GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_08192	A	A1S	Potri.003G059500	Potri.003G059500(AS)	POPTR_0003s05820	sp|Q54LT8|STRAP_DICDI	Serine-threonine kinase receptor-associated protein OS=Dictyostelium discoideum GN=strap PE=3 SV=1	AT3G15610.1	| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr3:5291076-5292796 REVERSE LENGTH=341	LOC_Os02g11060.1	protein|WD domain, G-beta repeat domain containing protein, expressed	IMGA|Medtr5g085250.1	E3 ubiquitin-protein ligase COP1 chr5 35784611-35795521 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0000166|nucleotide binding	GO:0005737|cytoplasm GO:0005829|cytosol GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_08193	A	A1S	Potri.003G059600	Potri.003G059600(AS)	POPTR_0003s05830	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_08194	A	A1S	Potri.003G059700	Potri.003G059700(AS)	POPTR_0003s05840	sp|Q9XI23|BOR4_ARATH	Boron transporter 4 OS=Arabidopsis thaliana GN=BOR4 PE=2 SV=1	AT1G15460.1	| Symbols: ATBOR4, BOR4 | HCO3- transporter family | chr1:5310196-5313376 REVERSE LENGTH=683	LOC_Os01g08020.1	protein|boron transporter protein, putative, expressed	NA	NA	GO:0006820|anion transport GO:0046713|borate transport GO:0080029|cellular response to boron-containing substance levels	GO:0005452|inorganic anion exchanger activity GO:0015301|anion:anion antiporter activity GO:0080139|borate efflux transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_08195	A	A2S	Potri.003G059800	Potri.003G059800(AS) Potri.001G174400(DS)	POPTR_0003s05850	NA	NA	AT5G25460.1	| Symbols: | Protein of unknown function, DUF642 | chr5:8863430-8865394 FORWARD LENGTH=369	LOC_Os01g42520.1	protein|expressed protein	IMGA|contig_51971_1.1	Unknown protein contig_51971 824-2968 E PREDN 20111014	GO:0010015|root morphogenesis GO:0080167|response to karrikin	GO:0003674|molecular_function	GO:0005576|extracellular region GO:0009505|plant-type cell wall GO:0009506|plasmodesma
pt2_08196	A	A1S	Potri.003G059900	Potri.003G059900(AS)	POPTR_0003s05860	NA	NA	AT1G52720.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15630.1); Has 61 Blast hits to 61 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:19641007-19641360 FORWARD LENGTH=117	LOC_Os01g07970.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009536|plastid
pt2_08197	A	A1S	Potri.003G060000	Potri.003G060000(AS)	POPTR_0003s05870	sp|O48652|UVR3_ARATH	(6-4)DNA photolyase OS=Arabidopsis thaliana GN=UVR3 PE=1 SV=2	AT3G15620.1	| Symbols: UVR3 | DNA photolyase family protein | chr3:5293475-5296548 REVERSE LENGTH=556	LOC_Os02g10990.1	protein|FAD binding domain of DNA photolyase domain containing protein, expressed	IMGA|Medtr1g043190.1	Cryptochrome 2B chr1 12445355-12448857 E EGN_Mt100125 20111014	GO:0006281|DNA repair GO:0006290|pyrimidine dimer repair GO:0009411|response to UV	GO:0003913|DNA photolyase activity GO:0003914|DNA (6-4) photolyase activity	GO:0005634|nucleus GO:0009507|chloroplast
pt2_08198	B	B1S	Potri.003G060000	Potri.003G060000(BS)	POPTR_0003s05870	sp|O48652|UVR3_ARATH	(6-4)DNA photolyase OS=Arabidopsis thaliana GN=UVR3 PE=1 SV=2	AT3G15620.1	| Symbols: UVR3 | DNA photolyase family protein | chr3:5293475-5296548 REVERSE LENGTH=556	LOC_Os02g10990.1	protein|FAD binding domain of DNA photolyase domain containing protein, expressed	IMGA|Medtr1g043190.1	Cryptochrome 2B chr1 12445355-12448857 E EGN_Mt100125 20111014	GO:0006281|DNA repair GO:0006290|pyrimidine dimer repair GO:0009411|response to UV	GO:0003913|DNA photolyase activity GO:0003914|DNA (6-4) photolyase activity	GO:0005634|nucleus GO:0009507|chloroplast
pt2_08199	C	C1S	Potri.003G060000	Potri.003G060000(CS)	sp|O48652|UVR3_ARATH	(6-4)DNA photolyase OS=Arabidopsis thaliana GN=UVR3 PE=1 SV=2	AT3G15620.1	| Symbols: UVR3 | DNA photolyase family protein | chr3:5293475-5296548 REVERSE LENGTH=556	LOC_Os02g10990.1	protein|FAD binding domain of DNA photolyase domain containing protein, expressed	IMGA|Medtr1g043190.1	Cryptochrome 2B chr1 12445355-12448857 E EGN_Mt100125 20111014	GO:0006281|DNA repair GO:0006290|pyrimidine dimer repair GO:0009411|response to UV	GO:0003913|DNA photolyase activity GO:0003914|DNA (6-4) photolyase activity	GO:0005634|nucleus GO:0009507|chloroplast
pt2_08200	A	A1S	Potri.003G060100	Potri.003G060100(AS)	POPTR_0003s05880	sp|Q9SSB8|CX5B2_ARATH	Cytochrome c oxidase subunit 5b-2, mitochondrial OS=Arabidopsis thaliana GN=COX5B-2 PE=2 SV=1	AT1G80230.1	| Symbols: | Rubredoxin-like superfamily protein | chr1:30169784-30170999 REVERSE LENGTH=171	LOC_Os06g05080.1	protein|cytochrome c oxidase subunit 5B, mitochondrial precursor, putative, expressed	IMGA|contig_52983_1.1	Cytochrome c oxidase subunit Vb contig_52983 661-2156 E PREDN 20111014	NA	GO:0004129|cytochrome-c oxidase activity	GO:0005739|mitochondrion GO:0005740|mitochondrial envelope
pt2_08201	B	B1S	Potri.003G060200	Potri.003G060200(BS)	POPTR_0003s05890	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_08202	A	A1S	Potri.003G060300	Potri.003G060300(AS)	POPTR_0003s05900	sp|Q9WTL7|LYPA2_MOUSE	Acyl-protein thioesterase 2 OS=Mus musculus GN=Lypla2 PE=1 SV=1	AT1G52700.1	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr1:19631186-19633366 REVERSE LENGTH=255	LOC_Os01g07960.1	protein|acyl-protein thioesterase, putative, expressed	IMGA|contig_55215_1.1	Acyl-protein thioesterase contig_55215 364-5917 F PREDN 20111014	NA	GO:0004091|carboxylesterase activity GO:0016787|hydrolase activity	GO:0005737|cytoplasm
pt2_08203	G	G1	NA	NA	POPTR_0003s05910	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_08204	C	C1S	Potri.003G060500	Potri.003G060500(CS)	sp|Q15269|PWP2_HUMAN	Periodic tryptophan protein 2 homolog OS=Homo sapiens GN=PWP2 PE=1 SV=2	AT1G15440.1	| Symbols: PWP2, ATPWP2 | periodic tryptophan protein 2 | chr1:5306159-5309460 REVERSE LENGTH=900	LOC_Os05g44320.1	protein|WD domain, G-beta repeat domain containing protein, expressed	IMGA|contig_53197_1.1	Wd-repeat protein contig_53197 137-4865 E PREDN 20111014	GO:0001510|RNA methylation GO:0006406|mRNA export from nucleus GO:0006606|protein import into nucleus GO:0008150|biological_process GO:0009220|pyrimidine ribonucleotide biosynthetic process	GO:0000166|nucleotide binding	GO:0005634|nucleus GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_08205	A	A2S	Potri.003G060500	Potri.003G060500(AS) Potri.001G173500(BS)	POPTR_0003s05930	sp|Q15269|PWP2_HUMAN	Periodic tryptophan protein 2 homolog OS=Homo sapiens GN=PWP2 PE=1 SV=2	AT1G15440.1	| Symbols: PWP2, ATPWP2 | periodic tryptophan protein 2 | chr1:5306159-5309460 REVERSE LENGTH=900	LOC_Os05g44320.1	protein|WD domain, G-beta repeat domain containing protein, expressed	IMGA|contig_53197_1.1	Wd-repeat protein contig_53197 137-4865 E PREDN 20111014	GO:0001510|RNA methylation GO:0006406|mRNA export from nucleus GO:0006606|protein import into nucleus GO:0008150|biological_process GO:0009220|pyrimidine ribonucleotide biosynthetic process	GO:0000166|nucleotide binding	GO:0005634|nucleus GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_08206	A	A2S	Potri.003G060600	Potri.003G060600(AS) Potri.003G060700(AS)	POPTR_0003s05940	sp|Q8LBK6|GRS15_ARATH	Monothiol glutaredoxin-S15, mitochondrial OS=Arabidopsis thaliana GN=GRXS15 PE=1 SV=2	AT3G15660.2	| Symbols: ATGRX4, GRX4 | glutaredoxin 4 | chr3:5308134-5309383 REVERSE LENGTH=169	LOC_Os01g34620.9	protein|OsGrx_S15.1 - glutaredoxin subgroup II, expressed	NA	NA	GO:0045454|cell redox homeostasis GO:0048653|anther development	GO:0005515|protein binding GO:0009055|electron carrier activity GO:0015035|protein disulfide oxidoreductase activity GO:0046872|metal ion binding	GO:0005739|mitochondrion
pt2_08207	C	C1S	Potri.003G060800	Potri.003G060800(CS)	NA	NA	AT3G25910.1	| Symbols: | Protein of unknown function (DUF1644) | chr3:9489836-9490954 FORWARD LENGTH=372	LOC_Os01g42700.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_08208	A	A1S	Potri.003G060900	Potri.003G060900(AS)	POPTR_0003s05960	sp|P69326|UBIQ_WHEAT	Ubiquitin OS=Triticum aestivum PE=3 SV=2	AT1G15420.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp12 (InterPro:IPR007148); Has 764 Blast hits to 656 proteins in 193 species: Archae - 0; Bacteria - 42; Metazoa - 237; Fungi - 154; Plants - 85; Viruses - 23; Other Eukaryotes - 223 (source: NCBI BLink). | chr1:5301794-5303296 REVERSE LENGTH=278	LOC_Os12g43830.1	protein|NUC189 domain containing protein, expressed	IMGA|Medtr5g092700.1	Bi-ubiquitin chr5 39454527-39453230 F EGN_Mt100125 20111014	GO:0006626|protein targeting to mitochondrion GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_08209	A	A1S	Potri.003G060900	Potri.003G060900(AS)	POPTR_0003s05960	sp|P69326|UBIQ_WHEAT	Ubiquitin OS=Triticum aestivum PE=3 SV=2	AT1G15420.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp12 (InterPro:IPR007148); Has 764 Blast hits to 656 proteins in 193 species: Archae - 0; Bacteria - 42; Metazoa - 237; Fungi - 154; Plants - 85; Viruses - 23; Other Eukaryotes - 223 (source: NCBI BLink). | chr1:5301794-5303296 REVERSE LENGTH=278	LOC_Os12g43830.1	protein|NUC189 domain containing protein, expressed	IMGA|Medtr5g092700.1	Bi-ubiquitin chr5 39454527-39453230 F EGN_Mt100125 20111014	GO:0006626|protein targeting to mitochondrion GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_08210	A	A1S	Potri.003G060900	Potri.003G060900(AS)	POPTR_0003s05960	sp|P69326|UBIQ_WHEAT	Ubiquitin OS=Triticum aestivum PE=3 SV=2	AT1G15420.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp12 (InterPro:IPR007148); Has 764 Blast hits to 656 proteins in 193 species: Archae - 0; Bacteria - 42; Metazoa - 237; Fungi - 154; Plants - 85; Viruses - 23; Other Eukaryotes - 223 (source: NCBI BLink). | chr1:5301794-5303296 REVERSE LENGTH=278	LOC_Os12g43830.1	protein|NUC189 domain containing protein, expressed	IMGA|Medtr5g092700.1	Bi-ubiquitin chr5 39454527-39453230 F EGN_Mt100125 20111014	GO:0006626|protein targeting to mitochondrion GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_08211	A	A3S	Potri.003G061000	Potri.003G061000(AS) Potri.003G061100(BS) Potri.003G061200(BS)	POPTR_0003s05970	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_08212	A	A3S	Potri.003G061200	Potri.003G061200(AS) Potri.003G061100(BS) Potri.003G061000(DS)	POPTR_0003s05980	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_08213	A	A1S	Potri.003G061300	Potri.003G061300(AS)	POPTR_0003s05990	NA	NA	AT3G15680.1	| Symbols: | Ran BP2/NZF zinc finger-like superfamily protein | chr3:5315437-5316048 FORWARD LENGTH=164	LOC_Os02g10920.2	protein|zinc finger family protein, putative, expressed	NA	NA	GO:0008150|biological_process GO:0009664|plant-type cell wall organization GO:0042545|cell wall modification	GO:0008270|zinc ion binding	GO:0005622|intracellular
pt2_08214	A	A2S	Potri.003G061400	Potri.003G061400(AS) Potri.001G172600(DS)	POPTR_0003s06000	NA	NA	AT3G15690.2	| Symbols: | Single hybrid motif superfamily protein | chr3:5317108-5319435 FORWARD LENGTH=263	NA	NA	IMGA|Medtr5g083520.1	Biotin carboxyl carrier protein of acetyl-CoA carboxylase chr5 35035995-35040845 E EGN_Mt100125 20111014	GO:0030003|cellular cation homeostasis GO:0070838|divalent metal ion transport	NA	GO:0009507|chloroplast
pt2_08215	A	A1S	Potri.003G061600	Potri.003G061600(AS)	POPTR_0003s06010	sp|Q9LT81|C3H39_ARATH	Zinc finger CCCH domain-containing protein 39 OS=Arabidopsis thaliana GN=At3g19360 PE=2 SV=1	AT3G19360.1	| Symbols: | Zinc finger (CCCH-type) family protein | chr3:6707544-6708864 FORWARD LENGTH=386	LOC_Os08g06330.1	protein|zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0043687|post-translational protein modification GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003676|nucleic acid binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_08216	A	A1S	Potri.003G061700	Potri.003G061700(AS)	POPTR_0003s06020	sp|O14111|PSD3_SCHPO	Phosphatidylserine decarboxylase proenzyme 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=psd3 PE=2 SV=2	AT5G57190.1	| Symbols: PSD2 | phosphatidylserine decarboxylase 2 | chr5:23171531-23175364 REVERSE LENGTH=635	LOC_Os01g72940.1	protein|phosphatidylserine decarboxylase, putative, expressed	NA	NA	GO:0006499|N-terminal protein myristoylation GO:0008654|phospholipid biosynthetic process	GO:0004609|phosphatidylserine decarboxylase activity GO:0005509|calcium ion binding	GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0005783|endoplasmic reticulum GO:0009705|plant-type vacuole membrane
pt2_08217	A	A1S	Potri.003G061800	Potri.003G061800(AS)	POPTR_0003s06030	NA	NA	AT1G15410.1	| Symbols: | aspartate-glutamate racemase family | chr1:5299577-5300681 FORWARD LENGTH=330	LOC_Os01g37470.1	protein|asp/Glu racemase, putative, expressed	NA	NA	GO:0006520|cellular amino acid metabolic process GO:0008152|metabolic process	GO:0016855|racemase and epimerase activity, acting on amino acids and derivatives	GO:0009507|chloroplast
pt2_08218	A	A1S	Potri.003G061900	Potri.003G061900(AS)	POPTR_0003s06040	NA	NA	AT5G11280.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:3597321-3598347 FORWARD LENGTH=209	LOC_Os01g37480.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_08219	A	A1S	Potri.003G062000	Potri.003G062000(AS)	POPTR_0003s06050	sp|Q9FZK1|FBX6_ARATH	F-box only protein 6 OS=Arabidopsis thaliana GN=FBX6 PE=2 SV=1	AT1G27340.1	| Symbols: | Galactose oxidase/kelch repeat superfamily protein | chr1:9495741-9497857 FORWARD LENGTH=467	LOC_Os01g69940.1	protein|OsFBX32 - F-box domain containing protein, expressed	NA	NA	GO:0010305|leaf vascular tissue pattern formation GO:0010928|regulation of auxin mediated signaling pathway GO:0060776|simple leaf morphogenesis	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_08220	A	A1S	Potri.003G062100	Potri.003G062100(AS)	POPTR_0003s06060	NA	NA	NA	NA	LOC_Os02g10900.1	protein|NB-ARC domain containing protein, expressed	NA	NA	GO:0006499|N-terminal protein myristoylation GO:0006952|defense response	GO:0043531|ADP binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_08221	C	C1S	Potri.003G062200	Potri.003G062200(CS)	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process GO:0010260|organ senescence	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_08222	A	A1S	Potri.003G062300	Potri.003G062300(AS)	POPTR_0003s06080	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_08223	A	A1S	Potri.003G062400	Potri.003G062400(AS)	POPTR_0003s06090	NA	NA	AT1G80160.1	| Symbols: | Lactoylglutathione lyase / glyoxalase I family protein | chr1:30151101-30151930 FORWARD LENGTH=167	LOC_Os05g07940.1	protein|glyoxalase family protein, putative, expressed	IMGA|Medtr5g021610.1	Lactoylglutathione lyase chr5 8120981-8119750 F EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0009414|response to water deprivation GO:0042538|hyperosmotic salinity response GO:0046482|para-aminobenzoic acid metabolic process	GO:0004462|lactoylglutathione lyase activity	GO:0005737|cytoplasm
pt2_08224	B	B1S	Potri.003G062600	Potri.003G062600(BS)	POPTR_0003s06100	sp|Q8W486|Y1491_ARATH	DUF246 domain-containing protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=1 SV=1	AT1G52630.1	| Symbols: | O-fucosyltransferase family protein | chr1:19606470-19608526 REVERSE LENGTH=439	LOC_Os08g42550.2	protein|AP2 domain containing protein, expressed	IMGA|Medtr5g042200.1	DUF246 domain-containing protein chr5 18147111-18142994 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0016757|transferase activity, transferring glycosyl groups	GO:0005794|Golgi apparatus
pt2_08225	A	A1S	Potri.003G062700	Potri.003G062700(AS)	POPTR_0003s06110	sp|Q8GW57|PP134_ARATH	Pentatricopeptide repeat-containing protein At1g80150, mitochondrial OS=Arabidopsis thaliana GN=At1g80150 PE=2 SV=2	AT1G80150.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:30148738-30149931 FORWARD LENGTH=397	LOC_Os08g39050.1	protein|pentatricopeptide, putative, expressed	IMGA|Medtr1g095880.1	Pentatricopeptide repeat-containing protein chr1 27567477-27561633 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_08226	B	B2S	Potri.003G062800	Potri.003G062800(BS) Potri.001G171200(BS)	POPTR_0003s06120	sp|Q5RC30|SC11C_PONAB	Signal peptidase complex catalytic subunit SEC11C OS=Pongo abelii GN=SEC11C PE=2 SV=3	AT1G52600.1	| Symbols: | Peptidase S24/S26A/S26B/S26C family protein | chr1:19590612-19592486 FORWARD LENGTH=180	LOC_Os06g16260.1	protein|OsSigP5 - Putative Type I Signal Peptidase homologue; employs a putative Ser/His catalytic dyad, expressed	NA	NA	GO:0006465|signal peptide processing GO:0006508|proteolysis GO:0009627|systemic acquired resistance GO:0034976|response to endoplasmic reticulum stress	GO:0008233|peptidase activity	GO:0005783|endoplasmic reticulum GO:0005886|plasma membrane GO:0009507|chloroplast GO:0016020|membrane
pt2_08227	A	A2S	Potri.003G063000	Potri.003G063000(AS) Potri.001G171100(DS)	POPTR_0003s06130	sp|Q55DE7|ATX2_DICDI	Ataxin-2 homolog OS=Dictyostelium discoideum GN=atxn2 PE=3 SV=1	AT3G14010.3	| Symbols: CID4 | CTC-interacting domain 4 | chr3:4637164-4640691 FORWARD LENGTH=595	LOC_Os02g27950.2	protein|ataxin-2 related protein, putative, expressed	NA	NA	GO:0009630|gravitropism	GO:0005515|protein binding	GO:0005634|nucleus
pt2_08228	A	A2S	Potri.003G063100	Potri.003G063100(AS) Potri.001G171000(DS)	POPTR_0003s06140	sp|Q9FNA9|PDAT1_ARATH	Phospholipid:diacylglycerol acyltransferase 1 OS=Arabidopsis thaliana GN=PDAT1 PE=2 SV=1	AT5G13640.1	| Symbols: ATPDAT, PDAT, PDAT1 | phospholipid:diacylglycerol acyltransferase | chr5:4393529-4397213 FORWARD LENGTH=671	LOC_Os09g27210.1	protein|lecithine cholesterol acyltransferase, putative, expressed	NA	NA	GO:0006629|lipid metabolic process	GO:0004607|phosphatidylcholine-sterol O-acyltransferase activity GO:0008374|O-acyltransferase activity GO:0046027|phospholipid:diacylglycerol acyltransferase activity	GO:0005634|nucleus GO:0005773|vacuole GO:0005783|endoplasmic reticulum
pt2_08229	R	R	NA	NA	POPTR_0003s06150	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_08230	A	A2S	Potri.003G062800	Potri.003G062800(AS) Potri.001G171200(DS)	POPTR_0003s06160	sp|Q5RC30|SC11C_PONAB	Signal peptidase complex catalytic subunit SEC11C OS=Pongo abelii GN=SEC11C PE=2 SV=3	AT1G52600.1	| Symbols: | Peptidase S24/S26A/S26B/S26C family protein | chr1:19590612-19592486 FORWARD LENGTH=180	LOC_Os06g16260.1	protein|OsSigP5 - Putative Type I Signal Peptidase homologue; employs a putative Ser/His catalytic dyad, expressed	NA	NA	GO:0006465|signal peptide processing GO:0006508|proteolysis GO:0009627|systemic acquired resistance GO:0034976|response to endoplasmic reticulum stress	GO:0008233|peptidase activity	GO:0005783|endoplasmic reticulum GO:0005886|plasma membrane GO:0009507|chloroplast GO:0016020|membrane
pt2_08231	C	C1S	Potri.003G063000	Potri.003G063000(CS)	sp|Q55DE7|ATX2_DICDI	Ataxin-2 homolog OS=Dictyostelium discoideum GN=atxn2 PE=3 SV=1	AT3G14010.3	| Symbols: CID4 | CTC-interacting domain 4 | chr3:4637164-4640691 FORWARD LENGTH=595	LOC_Os02g27950.2	protein|ataxin-2 related protein, putative, expressed	NA	NA	GO:0009630|gravitropism	GO:0005515|protein binding	GO:0005634|nucleus
pt2_08232	G	G4	NA	NA	POPTR_0003s06180	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_08233	A	A2S	Potri.003G063200	Potri.003G063200(AS) Potri.001G170800(DS)	POPTR_0003s06190	sp|Q8GYL9|BRXL2_ARATH	Protein Brevis radix-like 2 OS=Arabidopsis thaliana GN=BRXL2 PE=2 SV=1	AT3G14000.2	| Symbols: ATBRXL2, BRX-LIKE2 | DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein | chr3:4631170-4633353 REVERSE LENGTH=374	LOC_Os08g36020.1	protein|Disease resistance/zinc finger/chromosome condensation-like region protein, putative, expressed	IMGA|Medtr5g026970.1	Protein BREVIS RADIX chr5 10930283-10925938 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_08234	A	A1S	Potri.003G063300	Potri.003G063300(AS)	POPTR_0003s06200	NA	NA	AT3G13990.2	| Symbols: | Kinase-related protein of unknown function (DUF1296) | chr3:4625708-4630383 REVERSE LENGTH=847	LOC_Os06g10430.1	protein|protein of unknown function DUF1296 domain containing protein, expressed	IMGA|Medtr5g069290.1	hypothetical protein chr5 28344719-28357086 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005829|cytosol
pt2_08235	A	A1S	Potri.003G063400	Potri.003G063400(AS)	POPTR_0003s06210	NA	NA	AT1G54200.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13980.1); Has 1084 Blast hits to 581 proteins in 136 species: Archae - 0; Bacteria - 72; Metazoa - 212; Fungi - 78; Plants - 102; Viruses - 0; Other Eukaryotes - 620 (source: NCBI BLink). | chr1:20235855-20236955 FORWARD LENGTH=366	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_08236	A	A1S	Potri.003G063500	Potri.003G063500(AS)	POPTR_0003s06220	sp|Q9CAI1|DRG2_ARATH	Developmentally regulated G-protein 2 OS=Arabidopsis thaliana GN=DRG2 PE=2 SV=1	AT1G72660.3	| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:27354161-27356543 FORWARD LENGTH=399	LOC_Os05g28940.1	protein|GTP-binding protein, putative, expressed	NA	NA	GO:0006457|protein folding GO:0009408|response to heat GO:0009644|response to high light intensity GO:0016114|terpenoid biosynthetic process GO:0042542|response to hydrogen peroxide	GO:0005525|GTP binding	GO:0005737|cytoplasm
pt2_08237	A	A1S	Potri.003G063700	Potri.003G063700(AS)	POPTR_0003s06240	NA	NA	AT1G72650.2	| Symbols: TRFL6 | TRF-like 6 | chr1:27350253-27353483 FORWARD LENGTH=630	LOC_Os02g53670.2	protein|MYB family transcription factor, putative, expressed	NA	NA	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0009651|response to salt stress GO:0010048|vernalization response GO:0045892|negative regulation of transcription, DNA-dependent GO:0046686|response to cadmium ion	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_08238	A	A1S	Potri.003G063800	Potri.003G063800(AS)	POPTR_0003s06260	NA	NA	AT1G72640.1	| Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr1:27346409-27348147 REVERSE LENGTH=312	LOC_Os03g29730.1	protein|expressed protein	NA	NA	NA	GO:0000166|nucleotide binding	GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane
pt2_08239	A	A3S	Potri.003G063900	Potri.003G063900(AS) Potri.019G131700(DS) Potri.001G170100(DS)	POPTR_0003s06270	sp|Q570U6|EF4L4_ARATH	Protein ELF4-LIKE 4 OS=Arabidopsis thaliana GN=EFL4 PE=2 SV=1	AT1G17455.2	| Symbols: ELF4-L4 | ELF4-like 4 | chr1:5997932-5998276 FORWARD LENGTH=114	LOC_Os11g40610.4	protein|EARLY flowering protein, putative, expressed	NA	NA	GO:0008150|biological_process GO:0009648|photoperiodism	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_08240	C	C1A	Potri.003G064000	Potri.003G064000(CA)	NA	NA	AT1G17450.2	| Symbols: | B-block binding subunit of TFIIIC | chr1:5988579-5996693 REVERSE LENGTH=1844	LOC_Os02g42200.1	protein|transcription factor-related, putative, expressed	NA	NA	NA	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_08241	A	A1S	Potri.003G064100	Potri.003G064100(AS)	POPTR_0003s06290	sp|Q8VE65|TAF12_MOUSE	Transcription initiation factor TFIID subunit 12 OS=Mus musculus GN=Taf12 PE=1 SV=1	AT1G17440.2	| Symbols: EER4, TAF12B | Transcription initiation factor TFIID subunit A | chr1:5984407-5987663 REVERSE LENGTH=683	LOC_Os01g62820.3	protein|Transcription initiation factor TFIID subunit A containing protein, expressed	NA	NA	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0006352|DNA-dependent transcription, initiation GO:0006366|transcription from RNA polymerase II promoter GO:0009736|cytokinin mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010104|regulation of ethylene mediated signaling pathway	GO:0003674|molecular_function GO:0003677|DNA binding	GO:0005575|cellular_component GO:0005634|nucleus GO:0005669|transcription factor TFIID complex
pt2_08242	A	A1S	Potri.003G064200	Potri.003G064200(AS)	POPTR_0003s06300	NA	NA	AT5G45540.1	| Symbols: | Protein of unknown function (DUF594) | chr5:18458294-18460705 REVERSE LENGTH=803	LOC_Os11g42080.1	protein|expressed protein	NA	NA	GO:0006569|tryptophan catabolic process GO:0008150|biological_process GO:0009684|indoleacetic acid biosynthetic process GO:0010167|response to nitrate GO:0015706|nitrate transport	GO:0003674|molecular_function	GO:0005886|plasma membrane
pt2_08243	A	A1S	Potri.003G064500	Potri.003G064500(AS)	POPTR_0003s06310	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_08244	A	A1S	Potri.003G064600	Potri.003G064600(AS)	POPTR_0003s06320	sp|Q9SEI0|WER_ARATH	Transcription factor WER OS=Arabidopsis thaliana GN=WER PE=1 SV=1	AT5G14750.1	| Symbols: WER, ATMYB66, WER1, MYB66 | myb domain protein 66 | chr5:4763656-4764738 REVERSE LENGTH=203	LOC_Os01g50110.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr5g079670.1	Myb-like transcription factor chr5 33056957-33055245 E EGN_Mt100125 20111014	GO:0001708|cell fate specification GO:0006355|regulation of transcription, DNA-dependent GO:0009913|epidermal cell differentiation GO:0045165|cell fate commitment GO:0045893|positive regulation of transcription, DNA-dependent GO:0048765|root hair cell differentiation	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_08245	A	A1S	Potri.003G064700	Potri.003G064700(AS)	POPTR_0003s06330	sp|Q1PFE1|AIL1_ARATH	AP2-like ethylene-responsive transcription factor AIL1 OS=Arabidopsis thaliana GN=AIL1 PE=2 SV=1	AT1G72570.1	| Symbols: | Integrase-type DNA-binding superfamily protein | chr1:27331381-27333698 FORWARD LENGTH=415	LOC_Os03g56050.1	protein|AP2-like ethylene-responsive transcription factor AINTEGUMENTA, putative, expressed	IMGA|Medtr5g015070.1	AP2-like ethylene-responsive transcription factor ANT chr5 4923104-4919660 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009686|gibberellin biosynthetic process GO:0009887|organ morphogenesis	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_08246	C	C1S	Potri.003G064800	Potri.003G064800(CS)	NA	NA	AT1G72480.1	| Symbols: | Lung seven transmembrane receptor family protein | chr1:27286304-27288339 REVERSE LENGTH=509	LOC_Os09g26830.1	protein|lung seven transmembrane domain containing protein, putative, expressed	IMGA|Medtr5g067670.1	Transmembrane protein 87B chr5 27609093-27604465 E EGN_Mt100125 20111014	GO:0006084|acetyl-CoA metabolic process GO:0008150|biological_process GO:0016126|sterol biosynthetic process GO:0016132|brassinosteroid biosynthetic process	GO:0003674|molecular_function	GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0016021|integral to membrane
pt2_08247	A	A1S	Potri.003G064900	Potri.003G064900(AS)	POPTR_0003s06350	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_08248	A	A1S	Potri.003G065000	Potri.003G065000(AS)	POPTR_0003s06360	NA	NA	AT3G13960.1	| Symbols: AtGRF5, GRF5 | growth-regulating factor 5 | chr3:4608526-4610160 FORWARD LENGTH=397	LOC_Os02g53690.1	protein|growth regulating factor protein, putative, expressed	IMGA|Medtr5g027030.1	hypothetical protein chr5 10949245-10952049 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009737|response to abscisic acid stimulus GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009909|regulation of flower development GO:0009965|leaf morphogenesis GO:0010162|seed dormancy process GO:0016570|histone modification GO:0048366|leaf development GO:0048449|floral organ formation	GO:0005524|ATP binding GO:0016818|hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	GO:0005634|nucleus
pt2_08249	A	A2S	Potri.003G065300	Potri.003G065300(AS) Potri.013G141900(AS)	POPTR_0003s06370	sp|Q9ZRA4|AB19A_PRUPE	Auxin-binding protein ABP19a OS=Prunus persica GN=ABP19A PE=3 SV=1	AT1G72610.1	| Symbols: GLP1, ATGER1, GER1 | germin-like protein 1 | chr1:27339302-27339928 REVERSE LENGTH=208	LOC_Os08g35760.1	protein|Cupin domain containing protein, expressed	IMGA|Medtr5g031460.1	Auxin-binding protein ABP19a chr5 13065372-13066001 H EGN_Mt100125 20111014	GO:0008150|biological_process GO:0010103|stomatal complex morphogenesis GO:0030003|cellular cation homeostasis GO:0070838|divalent metal ion transport	GO:0030145|manganese ion binding GO:0045735|nutrient reservoir activity	GO:0005576|extracellular region GO:0031012|extracellular matrix GO:0048046|apoplast
pt2_08250	A	A1S	Potri.003G065400	Potri.003G065400(AS)	POPTR_0003s06380	sp|Q4VYC8|NSP1_MEDTR	Nodulation-signaling pathway 1 protein OS=Medicago truncatula GN=NSP1 PE=1 SV=1	AT3G13840.1	| Symbols: | GRAS family transcription factor | chr3:4555305-4556837 REVERSE LENGTH=510	LOC_Os03g29480.1	protein|nodulation-signaling pathway 1 protein, putative, expressed	IMGA|Medtr5g015490.1	GRAS family transcription factor chr5 5109613-5108138 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_08251	A	A1S	Potri.003G065500	Potri.003G065500(AS)	POPTR_0003s06390	NA	NA	AT1G54150.1	| Symbols: | E3 Ubiquitin ligase family protein | chr1:20215480-20217303 FORWARD LENGTH=383	LOC_Os03g08000.1	protein|expressed protein	NA	NA	NA	GO:0008270|zinc ion binding GO:0016881|acid-amino acid ligase activity	GO:0005739|mitochondrion
pt2_08252	A	A1S	Potri.003G065700	Potri.003G065700(AS)	POPTR_0003s06400	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_08253	A	A1S	Potri.003G065900	Potri.003G065900(AS)	POPTR_0003s06410	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_08254	A	A1S	Potri.003G066000	Potri.003G066000(AS)	POPTR_0003s06420	sp|P74007|SPOT_SYNY3	Probable guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=spoT PE=3 SV=1	AT1G54130.1	| Symbols: RSH3, AT-RSH3, ATRSH3 | RELA/SPOT homolog 3 | chr1:20211177-20213761 FORWARD LENGTH=715	LOC_Os08g35620.1	protein|HD domain containing protein, putative, expressed	IMGA|Medtr5g007870.1	GTP pyrophosphokinase chr5 1321884-1334785 E EGN_Mt100125 20111014	GO:0015969|guanosine tetraphosphate metabolic process	GO:0003824|catalytic activity GO:0008081|phosphoric diester hydrolase activity GO:0008728|GTP diphosphokinase activity GO:0046872|metal ion binding	GO:0009507|chloroplast
pt2_08255	R	R	NA	NA	POPTR_0003s06430	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_08256	A	A1S	Potri.003G066200	Potri.003G066200(AS)	POPTR_0003s06440	sp|Q7PC79|XPOT_ARATH	Exportin-T OS=Arabidopsis thaliana GN=PSD PE=2 SV=1	AT1G72560.3	| Symbols: PSD | ARM repeat superfamily protein | chr1:27325026-27329467 REVERSE LENGTH=988	LOC_Os07g42180.1	protein|exportin 1, putative, expressed	IMGA|contig_69685_1.1	Unknown protein contig_69685 826-467 H PREDN 20111014	GO:0006406|mRNA export from nucleus GO:0006409|tRNA export from nucleus GO:0006499|N-terminal protein myristoylation GO:0006606|protein import into nucleus GO:0009640|photomorphogenesis GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009908|flower development GO:0009909|regulation of flower development GO:0009933|meristem structural organization GO:0010014|meristem initiation GO:0010162|seed dormancy process GO:0010182|sugar mediated signaling pathway GO:0010228|vegetative to reproductive phase transition of meristem GO:0016567|protein ubiquitination GO:0019915|lipid storage GO:0050826|response to freezing	GO:0000049|tRNA binding GO:0015932|nucleobase-containing compound transmembrane transporter activity	GO:0005829|cytosol
pt2_08257	A	A1S	Potri.003G066300	Potri.003G066300(AS)	POPTR_0003s06450	sp|Q9CAH1|Y1725_ARATH	Putative receptor-like protein kinase At1g72540 OS=Arabidopsis thaliana GN=At1g72540 PE=2 SV=1	AT2G05940.1	| Symbols: | Protein kinase superfamily protein | chr2:2287514-2289270 REVERSE LENGTH=462	LOC_Os10g25550.1	protein|tyrosine protein kinase domain containing protein, putative, expressed	IMGA|Medtr1g015020.1	Protein kinase 2B chr1 4061824-4059575 E EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0006468|protein phosphorylation GO:0006499|N-terminal protein myristoylation GO:0006612|protein targeting to membrane GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009605|response to external stimulus GO:0009611|response to wounding GO:0009625|response to insect GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process GO:0009738|abscisic acid mediated signaling pathway GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010363|regulation of plant-type hypersensitive response GO:0016036|cellular response to phosphate starvation GO:0019375|galactolipid biosynthetic process GO:0030968|endoplasmic reticulum unfolded protein response GO:0031348|negative regulation of defense response GO:0042538|hyperosmotic salinity response GO:0042631|cellular response to water deprivation GO:0042742|defense response to bacterium GO:0043069|negative regulation of programmed cell death GO:0045087|innate immune response GO:0050832|defense response to fungus	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_08258	A	A1S	Potri.003G066400	Potri.003G066400(AS)	POPTR_0003s06460	sp|P24465|C71A1_PERAE	Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=2	AT5G07990.1	| Symbols: TT7, CYP75B1, D501 | Cytochrome P450 superfamily protein | chr5:2560437-2562859 FORWARD LENGTH=513	LOC_Os09g26960.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g070700.1	Cytochrome P450 chr5 28957501-28955161 E EGN_Mt100125 20111014	GO:0009411|response to UV GO:0009718|anthocyanin-containing compound biosynthetic process GO:0009733|response to auxin stimulus GO:0009744|response to sucrose stimulus GO:0009813|flavonoid biosynthetic process GO:0010224|response to UV-B GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0016711|flavonoid 3'-monooxygenase activity GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005576|extracellular region
pt2_08259	A	A1S	Potri.003G066500	Potri.003G066500(AS)	POPTR_0003s06470	NA	NA	NA	NA	LOC_Os09g26940.1	protein|cytochrome P450, putative, expressed	NA	NA	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	NA
pt2_08260	C	C2S	Potri.003G066800	Potri.003G066800(CS) Potri.003G066600(CS)	sp|Q9SD85|F3PH_ARATH	Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana GN=CYP75B1 PE=1 SV=1	AT5G07990.1	| Symbols: TT7, CYP75B1, D501 | Cytochrome P450 superfamily protein | chr5:2560437-2562859 FORWARD LENGTH=513	LOC_Os09g26960.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g021390.1	Cytochrome P450 chr5 8001998-8005410 F EGN_Mt100125 20111014	GO:0009411|response to UV GO:0009718|anthocyanin-containing compound biosynthetic process GO:0009733|response to auxin stimulus GO:0009744|response to sucrose stimulus GO:0009813|flavonoid biosynthetic process GO:0010224|response to UV-B GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0016711|flavonoid 3'-monooxygenase activity GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005576|extracellular region
pt2_08261	A	A1S	Potri.003G066700	Potri.003G066700(AS)	POPTR_0003s06490	sp|P05311|PSAB_PEA	Photosystem I P700 chlorophyll a apoprotein A2 OS=Pisum sativum GN=psaB PE=1 SV=1	ATCG00340.1	| Symbols: PSAB | Photosystem I, PsaA/PsaB protein | chrC:37375-39579 REVERSE LENGTH=734	LOC_Os10g21248.1	protein|photosystem I P700 chlorophyll a apoprotein A2, putative, expressed	IMGA|Medtr1g084890.1	Photosystem I P700 chlorophyll a apoprotein chr1 22368001-22366942 H EGN_Mt100125 20111014	GO:0006091|generation of precursor metabolites and energy GO:0006354|DNA-dependent transcription, elongation GO:0009768|photosynthesis, light harvesting in photosystem I GO:0015979|photosynthesis GO:0019684|photosynthesis, light reaction	GO:0016168|chlorophyll binding	GO:0009507|chloroplast GO:0009522|photosystem I GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009538|photosystem I reaction center GO:0009579|thylakoid GO:0009941|chloroplast envelope GO:0010287|plastoglobule GO:0016020|membrane GO:0016021|integral to membrane
pt2_08262	G	G1	NA	NA	POPTR_0003s06500	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_08263	A	A2S	Potri.003G066600	Potri.003G066600(AS) Potri.003G066800(AS)	POPTR_0003s06510	sp|Q9SD85|F3PH_ARATH	Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana GN=CYP75B1 PE=1 SV=1	AT5G07990.1	| Symbols: TT7, CYP75B1, D501 | Cytochrome P450 superfamily protein | chr5:2560437-2562859 FORWARD LENGTH=513	LOC_Os09g26960.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g021390.1	Cytochrome P450 chr5 8001998-8005410 F EGN_Mt100125 20111014	GO:0009411|response to UV GO:0009718|anthocyanin-containing compound biosynthetic process GO:0009733|response to auxin stimulus GO:0009744|response to sucrose stimulus GO:0009813|flavonoid biosynthetic process GO:0010224|response to UV-B GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0016711|flavonoid 3'-monooxygenase activity GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005576|extracellular region
pt2_08264	A	A1S	Potri.003G066900	Potri.003G066900(AS)	POPTR_0003s06520	sp|Q9SYG9|CCX4_ARATH	Cation/calcium exchanger 4 OS=Arabidopsis thaliana GN=CCX4 PE=2 SV=1	AT1G54115.1	| Symbols: ATCCX4, CCX4 | cation calcium exchanger 4 | chr1:20202118-20204052 FORWARD LENGTH=644	LOC_Os03g08230.1	protein|sodium/calcium exchanger protein, putative, expressed	IMGA|Medtr5g099160.1	Cation/calcium exchanger chr5 42426874-42427246 H EGN_Mt100125 20111014	GO:0006812|cation transport GO:0055085|transmembrane transport	GO:0015491|cation:cation antiporter activity	GO:0016021|integral to membrane
pt2_08265	A	A1S	Potri.003G067000	Potri.003G067000(AS)	POPTR_0003s06530	sp|O65351|SUBL_ARATH	Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1	AT3G14067.1	| Symbols: | Subtilase family protein | chr3:4658421-4660754 REVERSE LENGTH=777	LOC_Os02g53860.1	protein|OsSub22 - Putative Subtilisin homologue, expressed	IMGA|Medtr5g016120.1	Subtilisin-like protease chr5 5470271-5467977 H EGN_Mt100125 20111014	GO:0006508|proteolysis GO:0008152|metabolic process GO:0015996|chlorophyll catabolic process GO:0043086|negative regulation of catalytic activity	GO:0004252|serine-type endopeptidase activity GO:0042802|identical protein binding	GO:0005576|extracellular region GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0009505|plant-type cell wall GO:0048046|apoplast
pt2_08266	A	A1S	Potri.003G067100	Potri.003G067100(AS)	POPTR_0003s06540	sp|Q940X7|RBX1A_ARATH	RING-box protein 1a OS=Arabidopsis thaliana GN=RBX1A PE=1 SV=1	AT5G20570.1	| Symbols: ROC1, RBX1, HRT1, ATRBX1 | RING-box 1 | chr5:6956905-6958221 REVERSE LENGTH=118	LOC_Os02g47870.1	protein|anaphase-promoting complex subunit 11, putative, expressed	NA	NA	GO:0006511|ubiquitin-dependent protein catabolic process GO:0009733|response to auxin stimulus GO:0009853|photorespiration GO:0016567|protein ubiquitination GO:0016925|protein sumoylation GO:0042023|DNA endoreduplication GO:0042752|regulation of circadian rhythm GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0043248|proteasome assembly GO:0051510|regulation of unidimensional cell growth GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	GO:0005515|protein binding GO:0008270|zinc ion binding	GO:0005634|nucleus GO:0019005|SCF ubiquitin ligase complex GO:0031463|Cul3-RING ubiquitin ligase complex
pt2_08267	A	A1S	Potri.003G067200	Potri.003G067200(AS)	POPTR_0003s06550	NA	NA	AT3G14060.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54120.1); Has 30 Blast hits to 30 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:4657174-4657551 REVERSE LENGTH=125	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005618|cell wall GO:0005737|cytoplasm GO:0005739|mitochondrion
pt2_08268	A	A1S	Potri.003G067600	Potri.003G067600(AS)	POPTR_0003s06560	sp|O24371|LOX31_SOLTU	Linoleate 13S-lipoxygenase 3-1, chloroplastic OS=Solanum tuberosum GN=LOX3.1 PE=1 SV=1	AT1G17420.1	| Symbols: LOX3 | lipoxygenase 3 | chr1:5977512-5981384 FORWARD LENGTH=919	LOC_Os03g08220.1	protein|lipoxygenase protein, putative, expressed	IMGA|Medtr5g024020.1	Seed lipoxygenase chr5 9343596-9349664 F EGN_Mt100125 20111014	GO:0006952|defense response GO:0009555|pollen development GO:0009611|response to wounding GO:0009620|response to fungus GO:0009644|response to high light intensity GO:0009693|ethylene biosynthetic process GO:0009695|jasmonic acid biosynthetic process GO:0009753|response to jasmonic acid stimulus GO:0009901|anther dehiscence GO:0010200|response to chitin GO:0034440|lipid oxidation GO:0040007|growth GO:0048653|anther development GO:0080086|stamen filament development	GO:0016165|lipoxygenase activity	GO:0009507|chloroplast
pt2_08269	A	A2S	Potri.003G067700	Potri.003G067700(AS) Potri.001G167100(DS)	POPTR_0003s06570	sp|Q9SYG7|AL7B4_ARATH	Aldehyde dehydrogenase family 7 member B4 OS=Arabidopsis thaliana GN=ALDH7B4 PE=2 SV=3	AT1G54100.2	| Symbols: ALDH7B4 | aldehyde dehydrogenase 7B4 | chr1:20195435-20198853 REVERSE LENGTH=508	LOC_Os09g26880.1	protein|aldehyde dehydrogenase, putative, expressed	IMGA|Medtr1g014320.1	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase chr1 3773177-3769070 E EGN_Mt100125 20111014	GO:0000303|response to superoxide GO:0008152|metabolic process GO:0009269|response to desiccation GO:0009651|response to salt stress GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009743|response to carbohydrate stimulus GO:0009873|ethylene mediated signaling pathway GO:0015996|chlorophyll catabolic process GO:0055114|oxidation-reduction process	GO:0004028|3-chloroallyl aldehyde dehydrogenase activity GO:0016491|oxidoreductase activity	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_08270	A	A1S	Potri.003G067800	Potri.003G067800(AS)	POPTR_0003s06580	NA	NA	AT1G72510.2	| Symbols: | Protein of unknown function (DUF1677) | chr1:27303906-27304403 FORWARD LENGTH=165	LOC_Os05g44410.1	protein|expressed protein	IMGA|Medtr5g006430.1	hypothetical protein chr5 679306-678971 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_08271	A	A1S	Potri.003G067900	Potri.003G067900(AS)	POPTR_0003s06590	sp|Q9Y4D2|DGLA_HUMAN	Sn1-specific diacylglycerol lipase alpha OS=Homo sapiens GN=DAGLA PE=1 SV=3	AT3G14075.2	| Symbols: | Mono-/di-acylglycerol lipase, N-terminal;Lipase, class 3 | chr3:4663819-4666338 REVERSE LENGTH=642	LOC_Os02g54010.1	protein|lipase class 3 family protein, putative, expressed	NA	NA	GO:0006629|lipid metabolic process GO:0016042|lipid catabolic process	GO:0004091|carboxylesterase activity GO:0004806|triglyceride lipase activity	GO:0005886|plasma membrane
pt2_08272	A	A1S	Potri.003G068000	Potri.003G068000(AS)	POPTR_0003s06600	sp|Q5TIE3|VW5B1_HUMAN	von Willebrand factor A domain-containing protein 5B1 OS=Homo sapiens GN=VWA5B1 PE=1 SV=2	AT1G19110.1	| Symbols: | inter-alpha-trypsin inhibitor heavy chain-related | chr1:6602270-6605766 FORWARD LENGTH=754	LOC_Os07g42280.1	protein|von Willebrand factor type A domain containing protein, expressed	NA	NA	GO:0008150|biological_process GO:0009690|cytokinin metabolic process GO:0019344|cysteine biosynthetic process	GO:0003674|molecular_function	GO:0005576|extracellular region GO:0005886|plasma membrane GO:0016020|membrane
pt2_08273	A	A1S	Potri.003G068000	Potri.003G068000(AS)	POPTR_0003s06600	sp|Q5TIE3|VW5B1_HUMAN	von Willebrand factor A domain-containing protein 5B1 OS=Homo sapiens GN=VWA5B1 PE=1 SV=2	AT1G19110.1	| Symbols: | inter-alpha-trypsin inhibitor heavy chain-related | chr1:6602270-6605766 FORWARD LENGTH=754	LOC_Os07g42280.1	protein|von Willebrand factor type A domain containing protein, expressed	NA	NA	GO:0008150|biological_process GO:0009690|cytokinin metabolic process GO:0019344|cysteine biosynthetic process	GO:0003674|molecular_function	GO:0005576|extracellular region GO:0005886|plasma membrane GO:0016020|membrane
pt2_08274	A	A1S	Potri.003G068000	Potri.003G068000(AS)	POPTR_0003s06600	sp|Q5TIE3|VW5B1_HUMAN	von Willebrand factor A domain-containing protein 5B1 OS=Homo sapiens GN=VWA5B1 PE=1 SV=2	AT1G19110.1	| Symbols: | inter-alpha-trypsin inhibitor heavy chain-related | chr1:6602270-6605766 FORWARD LENGTH=754	LOC_Os07g42280.1	protein|von Willebrand factor type A domain containing protein, expressed	NA	NA	GO:0008150|biological_process GO:0009690|cytokinin metabolic process GO:0019344|cysteine biosynthetic process	GO:0003674|molecular_function	GO:0005576|extracellular region GO:0005886|plasma membrane GO:0016020|membrane
pt2_08275	C	C1S	Potri.003G068000	Potri.003G068000(CS)	sp|Q5TIE3|VW5B1_HUMAN	von Willebrand factor A domain-containing protein 5B1 OS=Homo sapiens GN=VWA5B1 PE=1 SV=2	AT1G19110.1	| Symbols: | inter-alpha-trypsin inhibitor heavy chain-related | chr1:6602270-6605766 FORWARD LENGTH=754	LOC_Os07g42280.1	protein|von Willebrand factor type A domain containing protein, expressed	NA	NA	GO:0008150|biological_process GO:0009690|cytokinin metabolic process GO:0019344|cysteine biosynthetic process	GO:0003674|molecular_function	GO:0005576|extracellular region GO:0005886|plasma membrane GO:0016020|membrane
pt2_08276	A	A1S	Potri.003G068100	Potri.003G068100(AS)	POPTR_0003s06610	sp|B0USF1|NDK_HAES2	Nucleoside diphosphate kinase OS=Haemophilus somnus (strain 2336) GN=ndk PE=3 SV=1	AT1G17410.1	| Symbols: | Nucleoside diphosphate kinase family protein | chr1:5968627-5969780 REVERSE LENGTH=181	LOC_Os02g35700.1	protein|nucleoside diphosphate kinase, putative, expressed	IMGA|contig_12980_1.1	Nucleoside diphosphate kinase contig_12980 3343-856 E PREDN 20111014	GO:0006165|nucleoside diphosphate phosphorylation GO:0006183|GTP biosynthetic process GO:0006228|UTP biosynthetic process GO:0006241|CTP biosynthetic process GO:0009117|nucleotide metabolic process GO:0009218|pyrimidine ribonucleotide metabolic process GO:0019690|pyrimidine deoxyribonucleoside interconversion	GO:0004550|nucleoside diphosphate kinase activity GO:0005524|ATP binding	GO:0005737|cytoplasm GO:0009507|chloroplast
pt2_08277	A	A1S	Potri.003G068300	Potri.003G068300(AS)	POPTR_0003s06620	NA	NA	AT1G72490.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G17400.1); Has 75 Blast hits to 75 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 4; Plants - 58; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). | chr1:27289435-27290732 REVERSE LENGTH=287	LOC_Os07g42290.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_08278	A	A2S	Potri.003G068400	Potri.003G068400(AS) Potri.001G166600(DS)	POPTR_0003s06630	sp|Q54W83|LSM1_DICDI	Probable U6 snRNA-associated Sm-like protein LSm1 OS=Dictyostelium discoideum GN=lsm1 PE=3 SV=1	AT3G14080.2	| Symbols: | Small nuclear ribonucleoprotein family protein | chr3:4667717-4668989 FORWARD LENGTH=128	LOC_Os04g36810.1	protein|LSM domain containing protein, expressed	NA	NA	GO:0010228|vegetative to reproductive phase transition of meristem	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005732|small nucleolar ribonucleoprotein complex
pt2_08279	A	A1S	Potri.003G068500	Potri.003G068500(AS)	POPTR_0003s06640	sp|Q28EW0|TM87A_XENTR	Transmembrane protein 87A OS=Xenopus tropicalis GN=tmem87a PE=2 SV=1	AT1G72480.1	| Symbols: | Lung seven transmembrane receptor family protein | chr1:27286304-27288339 REVERSE LENGTH=509	LOC_Os09g26830.1	protein|lung seven transmembrane domain containing protein, putative, expressed	IMGA|Medtr5g067670.1	Transmembrane protein 87B chr5 27609093-27604465 E EGN_Mt100125 20111014	GO:0007020|microtubule nucleation GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005794|Golgi apparatus GO:0016021|integral to membrane
pt2_08280	A	A1S	Potri.003G068700	Potri.003G068700(AS)	POPTR_0003s06650	sp|O54922|EXOC7_RAT	Exocyst complex component 7 OS=Rattus norvegicus GN=Exoc7 PE=2 SV=1	AT1G72470.1	| Symbols: ATEXO70D1, EXO70D1 | exocyst subunit exo70 family protein D1 | chr1:27283759-27285660 FORWARD LENGTH=633	LOC_Os08g35470.1	protein|exo70 exocyst complex subunit, putative, expressed	IMGA|contig_82691_1.1	Exocyst complex protein EXO70 contig_82691 392-2891 E PREDN 20111014	GO:0006887|exocytosis GO:0006904|vesicle docking involved in exocytosis	NA	GO:0000145|exocyst GO:0005634|nucleus GO:0005829|cytosol
pt2_08281	A	A1S	Potri.003G068800	Potri.003G068800(AS)	POPTR_0003s06660	sp|Q3E991|Y5269_ARATH	Probable inactive leucine-rich repeat receptor-like protein kinase At5g20690 OS=Arabidopsis thaliana GN=At5g20690 PE=2 SV=4	AT3G42880.1	| Symbols: | Leucine-rich repeat protein kinase family protein | chr3:14954587-14956577 FORWARD LENGTH=633	LOC_Os06g09860.1	protein|expressed protein	IMGA|Medtr5g083480.1	Receptor-like kinase chr5 35014725-35012170 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005576|extracellular region GO:0009506|plasmodesma
pt2_08282	B	B2S	Potri.003G068900	Potri.003G068900(BS) Potri.001G166200(DS)	POPTR_0003s06670	sp|Q9C9E3|TI11B_ARATH	Protein TIFY 11B OS=Arabidopsis thaliana GN=TIFY11B PE=1 SV=1	AT1G72450.1	| Symbols: JAZ6, TIFY11B | jasmonate-zim-domain protein 6 | chr1:27274336-27276136 REVERSE LENGTH=269	LOC_Os07g42370.1	protein|zinc-finger protein, putative, expressed	IMGA|Medtr5g013530.1	Protein TIFY chr5 4054231-4055270 F EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0006612|protein targeting to membrane GO:0007165|signal transduction GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009555|pollen development GO:0009605|response to external stimulus GO:0009611|response to wounding GO:0009620|response to fungus GO:0009694|jasmonic acid metabolic process GO:0009695|jasmonic acid biosynthetic process GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009753|response to jasmonic acid stimulus GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009908|flower development GO:0010200|response to chitin GO:0010363|regulation of plant-type hypersensitive response GO:0030968|endoplasmic reticulum unfolded protein response GO:0031348|negative regulation of defense response GO:0035556|intracellular signal transduction GO:0042538|hyperosmotic salinity response GO:0042742|defense response to bacterium GO:0043069|negative regulation of programmed cell death GO:0050832|defense response to fungus	GO:0005515|protein binding	GO:0005634|nucleus
pt2_08283	A	A1S	Potri.003G069000	Potri.003G069000(AS)	POPTR_0003s06680	sp|Q01085|TIAR_HUMAN	Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 PE=1 SV=1	AT1G17370.1	| Symbols: UBP1B | oligouridylate binding protein 1B | chr1:5951842-5954825 REVERSE LENGTH=419	LOC_Os11g40510.1	protein|RNA recognition motif containing protein, putative, expressed	IMGA|Medtr1g019150.1	Polyadenylate-binding protein chr1 5864665-5869890 F EGN_Mt100125 20111014	NA	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003730|mRNA 3'-UTR binding	NA
pt2_08284	A	A1S	Potri.003G069200	Potri.003G069200(AS)	POPTR_0003s06690	NA	NA	AT1G72390.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Spt20 family (InterPro:IPR021950); Has 8778 Blast hits to 7244 proteins in 477 species: Archae - 6; Bacteria - 326; Metazoa - 4198; Fungi - 1506; Plants - 923; Viruses - 22; Other Eukaryotes - 1797 (source: NCBI BLink). | chr1:27245455-27251218 FORWARD LENGTH=1325	LOC_Os10g25200.1	protein|expressed protein	IMGA|Medtr5g009590.1	hypothetical protein chr5 2097955-2104904 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_08285	A	A1S	Potri.003G069300	Potri.003G069300(AS)	POPTR_0003s06700	sp|Q9LJH5|GLO4_ARATH	Peroxisomal (S)-2-hydroxy-acid oxidase GLO4 OS=Arabidopsis thaliana GN=GLO4 PE=2 SV=1	AT3G14130.1	| Symbols: | Aldolase-type TIM barrel family protein | chr3:4685844-4687852 REVERSE LENGTH=363	LOC_Os07g42440.3	protein|hydroxyacid oxidase 1, putative, expressed	NA	NA	GO:0042742|defense response to bacterium GO:0050665|hydrogen peroxide biosynthetic process GO:0055114|oxidation-reduction process	GO:0003824|catalytic activity GO:0008891|glycolate oxidase activity GO:0010181|FMN binding GO:0016491|oxidoreductase activity	GO:0005737|cytoplasm
pt2_08286	A	A1S	Potri.003G069400	Potri.003G069400(AS)	POPTR_0003s06710	sp|Q9LJH5|GLO4_ARATH	Peroxisomal (S)-2-hydroxy-acid oxidase GLO4 OS=Arabidopsis thaliana GN=GLO4 PE=2 SV=1	AT3G14130.1	| Symbols: | Aldolase-type TIM barrel family protein | chr3:4685844-4687852 REVERSE LENGTH=363	LOC_Os07g42440.3	protein|hydroxyacid oxidase 1, putative, expressed	NA	NA	GO:0042742|defense response to bacterium GO:0050665|hydrogen peroxide biosynthetic process GO:0055114|oxidation-reduction process	GO:0003824|catalytic activity GO:0008891|glycolate oxidase activity GO:0010181|FMN binding GO:0016491|oxidoreductase activity	GO:0005737|cytoplasm
pt2_08287	A	A1S	Potri.003G069600	Potri.003G069600(AS)	POPTR_0003s06720	sp|Q9LJH5|GLO4_ARATH	Peroxisomal (S)-2-hydroxy-acid oxidase GLO4 OS=Arabidopsis thaliana GN=GLO4 PE=2 SV=1	AT3G14130.1	| Symbols: | Aldolase-type TIM barrel family protein | chr3:4685844-4687852 REVERSE LENGTH=363	LOC_Os07g42440.3	protein|hydroxyacid oxidase 1, putative, expressed	NA	NA	GO:0042742|defense response to bacterium GO:0050665|hydrogen peroxide biosynthetic process GO:0055114|oxidation-reduction process	GO:0003824|catalytic activity GO:0008891|glycolate oxidase activity GO:0010181|FMN binding GO:0016491|oxidoreductase activity	GO:0005737|cytoplasm
pt2_08288	A	A1S	Potri.003G069700	Potri.003G069700(AS)	POPTR_0003s06730	sp|Q338N2|C3H62_ORYSJ	Zinc finger CCCH domain-containing protein 62 OS=Oryza sativa subsp. japonica GN=Os10g0391300 PE=2 SV=2	AT5G66840.1	| Symbols: | SAP domain-containing protein | chr5:26692922-26695296 REVERSE LENGTH=551	LOC_Os10g25220.1	protein|SAP domain containing protein, expressed	IMGA|Medtr5g017820.1	Zinc finger CCCH domain-containing protein chr5 6330680-6327312 E EGN_Mt100125 20111014	NA	GO:0003676|nucleic acid binding GO:0003677|DNA binding	GO:0005634|nucleus
pt2_08289	A	A1S	Potri.003G069800	Potri.003G069800(AS)	POPTR_0003s06740	sp|Q9C9P4|KASC2_ARATH	3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic OS=Arabidopsis thaliana GN=KAS2 PE=1 SV=1	AT1G74960.3	| Symbols: FAB1 | fatty acid biosynthesis 1 | chr1:28152564-28155948 REVERSE LENGTH=541	LOC_Os07g42420.1	protein|3-oxoacyl-synthase, putative, expressed	NA	NA	GO:0000038|very long-chain fatty acid metabolic process GO:0006633|fatty acid biosynthetic process GO:0008152|metabolic process GO:0009058|biosynthetic process GO:0009409|response to cold GO:0009790|embryo development GO:0010020|chloroplast fission GO:0042335|cuticle development	GO:0003824|catalytic activity GO:0004312|fatty acid synthase activity GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0009507|chloroplast GO:0009536|plastid GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope GO:0016020|membrane
pt2_08290	A	A1S	Potri.003G069900	Potri.003G069900(AS)	POPTR_0003s06750	sp|Q94AU2|SEC22_ARATH	25.3 kDa vesicle transport protein OS=Arabidopsis thaliana GN=SEC22 PE=2 SV=1	AT1G11890.1	| Symbols: SEC22, ATSEC22 | Synaptobrevin family protein | chr1:4011509-4012835 FORWARD LENGTH=218	LOC_Os03g57760.2	protein|25.3 kDa vesicle transport protein, putative, expressed	NA	NA	GO:0006457|protein folding GO:0006810|transport GO:0009408|response to heat GO:0009644|response to high light intensity GO:0016192|vesicle-mediated transport GO:0034976|response to endoplasmic reticulum stress GO:0042542|response to hydrogen peroxide	GO:0005215|transporter activity	GO:0005783|endoplasmic reticulum GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_08291	A	A1S	Potri.003G070000	Potri.003G070000(AS)	POPTR_0003s06760	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_08292	A	A1S	Potri.003G070100	Potri.003G070100(AS)	POPTR_0003s06770	sp|P05050|ALKB_ECOLI	Alpha-ketoglutarate-dependent dioxygenase AlkB OS=Escherichia coli (strain K12) GN=alkB PE=1 SV=1	AT3G14160.1	| Symbols: | 2-oxoglutarate-dependent dioxygenase family protein | chr3:4693495-4695198 FORWARD LENGTH=455	LOC_Os03g60190.1	protein|oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed	IMGA|contig_98450_1.1	AlkB alkylated DNA repair protein contig_98450 214-2403 E PREDN 20111014	GO:0008150|biological_process GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	GO:0005575|cellular_component GO:0005634|nucleus
pt2_08293	A	A1S	Potri.003G070200	Potri.003G070200(AS)	POPTR_0003s06780	NA	NA	AT3G14170.1	| Symbols: | Plant protein of unknown function (DUF936) | chr3:4696115-4697989 REVERSE LENGTH=505	LOC_Os03g08390.2	protein|expressed protein	IMGA|Medtr5g034370.1	hypothetical protein chr5 14472516-14475481 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_08294	A	A1S	Potri.003G070300	Potri.003G070300(AS)	POPTR_0003s06790	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_08295	A	A1S	Potri.003G070400	Potri.003G070400(AS)	POPTR_0003s06800	NA	NA	AT3G14172.2	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: COP1-interacting protein-related (TAIR:AT1G72410.1). | chr3:4698860-4704773 REVERSE LENGTH=1262	LOC_Os07g42410.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_08296	A	A1S	Potri.003G070400	Potri.003G070400(AS)	POPTR_0003s06800	NA	NA	AT3G14172.2	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: COP1-interacting protein-related (TAIR:AT1G72410.1). | chr3:4698860-4704773 REVERSE LENGTH=1262	LOC_Os07g42410.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_08297	C	C1S	Potri.003G070400	Potri.003G070400(CS)	NA	NA	AT3G14172.2	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: COP1-interacting protein-related (TAIR:AT1G72410.1). | chr3:4698860-4704773 REVERSE LENGTH=1262	LOC_Os07g42410.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_08298	A	A1S	Potri.003G070500	Potri.003G070500(AS)	POPTR_0003s06820	NA	NA	AT1G54070.1	| Symbols: | Dormancy/auxin associated family protein | chr1:20182683-20183242 FORWARD LENGTH=123	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_08299	A	A1S	Potri.003G070600	Potri.003G070600(AS)	POPTR_0003s06830	sp|O35723|DNJB3_MOUSE	DnaJ homolog subfamily B member 3 OS=Mus musculus GN=Dnajb3 PE=2 SV=1	AT3G14200.1	| Symbols: | Chaperone DnaJ-domain superfamily protein | chr3:4712881-4714361 REVERSE LENGTH=230	LOC_Os02g54130.2	protein|heat shock protein DnaJ, putative, expressed	NA	NA	GO:0006457|protein folding	GO:0031072|heat shock protein binding	GO:0005575|cellular_component
pt2_08300	A	A1A	Potri.003G070800	Potri.003G070800(AA)	POPTR_0003s06840	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_08301	A	A1S	Potri.003G070900	Potri.003G070900(AS)	POPTR_0003s06850	NA	NA	NA	NA	NA	NA	NA	NA	GO:0009733|response to auxin stimulus	GO:0003674|molecular_function	NA
pt2_08302	A	A2S	Potri.003G071000	Potri.003G071000(AS) Potri.001G164300(DS)	POPTR_0003s06860	NA	NA	AT1G72430.1	| Symbols: | SAUR-like auxin-responsive protein family | chr1:27265150-27265509 REVERSE LENGTH=119	LOC_Os08g35110.1	protein|OsSAUR33 - Auxin-responsive SAUR gene family member, expressed	IMGA|contig_165881_1.1	SAUR33-auxin-responsive SAUR family member contig_165881 483-893 E PREDN 20111014	GO:0009733|response to auxin stimulus GO:0016126|sterol biosynthetic process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_08303	A	A1S	Potri.003G071100	Potri.003G071100(AS)	POPTR_0003s06870	sp|Q9SYG1|HS174_ARATH	17.4 kDa class III heat shock protein OS=Arabidopsis thaliana GN=HSP17.4B PE=2 SV=1	AT1G54050.1	| Symbols: | HSP20-like chaperones superfamily protein | chr1:20179558-20180122 REVERSE LENGTH=155	LOC_Os02g54140.1	protein|hsp20/alpha crystallin family protein, putative, expressed	IMGA|Medtr5g081530.1	18.2 kDa class I heat shock protein chr5 33907234-33907931 F EGN_Mt100125 20111014	GO:0006457|protein folding GO:0009408|response to heat GO:0009644|response to high light intensity GO:0042542|response to hydrogen peroxide	GO:0003674|molecular_function	GO:0005737|cytoplasm
pt2_08304	A	A2S	Potri.003G071200	Potri.003G071200(AS) Potri.001G164000(DS)	POPTR_0003s06880	sp|O22518|RSSA_SOYBN	40S ribosomal protein SA OS=Glycine max PE=2 SV=1	AT1G72370.2	| Symbols: P40, AP40, RP40, RPSAA | 40s ribosomal protein SA | chr1:27243148-27244842 REVERSE LENGTH=294	LOC_Os03g08440.2	protein|ribosomal protein S2, putative, expressed	NA	NA	GO:0000028|ribosomal small subunit assembly GO:0000447|endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0000461|endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0001510|RNA methylation GO:0006096|glycolysis GO:0006407|rRNA export from nucleus GO:0006412|translation GO:0006606|protein import into nucleus GO:0006833|water transport GO:0006970|response to osmotic stress GO:0006972|hyperosmotic response GO:0007030|Golgi organization GO:0009266|response to temperature stimulus GO:0009651|response to salt stress GO:0009664|plant-type cell wall organization GO:0042256|mature ribosome assembly GO:0042545|cell wall modification GO:0046686|response to cadmium ion	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol GO:0005840|ribosome GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0009507|chloroplast GO:0015935|small ribosomal subunit GO:0016020|membrane GO:0022626|cytosolic ribosome GO:0022627|cytosolic small ribosomal subunit GO:0030686|90S preribosome
pt2_08305	A	A1S	Potri.003G071300	Potri.003G071300(AS)	POPTR_0003s06890	sp|Q91WF7|FIG4_MOUSE	Polyphosphoinositide phosphatase OS=Mus musculus GN=Fig4 PE=1 SV=1	AT3G14205.1	| Symbols: | Phosphoinositide phosphatase family protein | chr3:4716008-4720524 REVERSE LENGTH=808	LOC_Os03g08430.2	protein|SAC domain containing protein, putative, expressed	IMGA|Medtr5g023960.2	Phosphatidylinositide ph