Probe	Grade	Type	Best Gene Model	All Gene Models	Design Target	UniProt	UniProtName	TAIR10	AtName	Rice	OsName	Medicago	MtName	biological_process	molecular_function	cellular_component
pt2_00001	A	A1S	Potri.016G098500	Potri.016G098500(AS)	POPTR_0001s00200	sp|Q9SR77|HBPL1_ARATH	Heme-binding-like protein At3g10130, chloroplastic OS=Arabidopsis thaliana GN=At3g10130 PE=1 SV=1	AT3G10130.1	| Symbols: | SOUL heme-binding family protein | chr3:3131122-3133158 REVERSE LENGTH=309	LOC_Os02g33020.1	protein|SOUL heme-binding protein, putative, expressed	NA	NA	GO:0008150|biological_process	NA	GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0010287|plastoglobule
pt2_00002	B	B1S	Potri.016G098400	Potri.016G098400(BS)	POPTR_0001s00210	sp|O04376|2A5B_ARATH	Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform OS=Arabidopsis thaliana GN=B'BETA PE=1 SV=1	AT3G09880.1	| Symbols: ATB' BETA | Protein phosphatase 2A regulatory B subunit family protein | chr3:3029902-3031931 FORWARD LENGTH=499	LOC_Os03g47790.1	protein|transposon protein, putative, unclassified, expressed	IMGA|Medtr1g011460.1	Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform chr1 2355347-2358219 E EGN_Mt100125 20111014	GO:0007165|signal transduction	GO:0008601|protein phosphatase type 2A regulator activity	GO:0000159|protein phosphatase type 2A complex GO:0005634|nucleus
pt2_00003	A	A1S	Potri.001G120000	Potri.001G120000(AS)	POPTR_0001s00220	sp|Q9FWX2|NAC7_ARATH	NAC domain-containing protein 7 OS=Arabidopsis thaliana GN=NAC007 PE=2 SV=2	AT1G12260.1	| Symbols: VND4, EMB2749, ANAC007, NAC007 | NAC 007 | chr1:4163058-4164486 REVERSE LENGTH=395	LOC_Os02g42970.1	protein|NAC domain containing protein, putative, expressed	IMGA|Medtr5g012080.1	NAC domain protein chr5 3331754-3333571 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009793|embryo development ending in seed dormancy GO:0044036|cell wall macromolecule metabolic process	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00004	A	A2S	Potri.001G120100	Potri.001G120100(AS) Potri.003G112900(DS)	POPTR_0001s00230	sp|Q8H1Q1|TL225_ARATH	Thylakoid lumenal protein At1g12250, chloroplastic OS=Arabidopsis thaliana GN=At1g12250 PE=1 SV=1	AT1G12250.2	| Symbols: | Pentapeptide repeat-containing protein | chr1:4159623-4161269 FORWARD LENGTH=206	LOC_Os02g42960.1	protein|thylakoid lumenal protein, putative, expressed	IMGA|Medtr5g012110.2	Thylakoid lumenal protein chr5 3342177-3340499 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005576|extracellular region GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009543|chloroplast thylakoid lumen GO:0009579|thylakoid
pt2_00005	A	A1S	Potri.001G120200	Potri.001G120200(AS)	POPTR_0001s00240	sp|O22152|YAB1_ARATH	Axial regulator YABBY 1 OS=Arabidopsis thaliana GN=YAB1 PE=1 SV=1	AT2G45190.1	| Symbols: AFO, FIL, YAB1 | Plant-specific transcription factor YABBY family protein | chr2:18628450-18630552 REVERSE LENGTH=229	LOC_Os04g45330.1	protein|YABBY domain containing protein, putative, expressed	IMGA|Medtr5g034030.1	Axial regulator YABBY chr5 14275693-14277568 H EGN_Mt100125 20111014	GO:0006333|chromatin assembly or disassembly GO:0009737|response to abscisic acid stimulus GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009909|regulation of flower development GO:0009933|meristem structural organization GO:0009944|polarity specification of adaxial/abaxial axis GO:0010027|thylakoid membrane organization GO:0010093|specification of floral organ identity GO:0010103|stomatal complex morphogenesis GO:0010154|fruit development GO:0010158|abaxial cell fate specification GO:0010159|specification of organ position GO:0010162|seed dormancy process GO:0010228|vegetative to reproductive phase transition of meristem GO:0010450|inflorescence meristem growth GO:0016226|iron-sulfur cluster assembly GO:0045165|cell fate commitment GO:0048481|ovule development	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_00006	A	A2S	Potri.001G120300	Potri.001G120300(AS) Potri.003G112700(DS)	POPTR_0001s00250	sp|Q9SU40|SKU5_ARATH	Monocopper oxidase-like protein SKU5 OS=Arabidopsis thaliana GN=SKU5 PE=1 SV=1	AT4G12420.2	| Symbols: SKU5 | Cupredoxin superfamily protein | chr4:7349941-7352868 REVERSE LENGTH=587	LOC_Os06g01490.1	protein|monocopper oxidase, putative, expressed	IMGA|Medtr5g018270.1	L-ascorbate oxidase-like protein chr5 6538701-6543083 F EGN_Mt100125 20111014	GO:0000271|polysaccharide biosynthetic process GO:0009825|multidimensional cell growth GO:0009932|cell tip growth GO:0010817|regulation of hormone levels GO:0016051|carbohydrate biosynthetic process GO:0030243|cellulose metabolic process GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0048765|root hair cell differentiation GO:0048767|root hair elongation GO:0055114|oxidation-reduction process GO:0071555|cell wall organization	GO:0005507|copper ion binding GO:0016491|oxidoreductase activity	GO:0005576|extracellular region GO:0005618|cell wall GO:0005774|vacuolar membrane GO:0005886|plasma membrane GO:0009505|plant-type cell wall GO:0009506|plasmodesma GO:0016020|membrane GO:0031225|anchored to membrane GO:0046658|anchored to plasma membrane GO:0048046|apoplast
pt2_00007	A	A1S	Potri.001G120400	Potri.001G120400(AS)	POPTR_0001s00260	sp|B0UV30|TAL_HAES2	Transaldolase OS=Haemophilus somnus (strain 2336) GN=tal PE=3 SV=1	AT1G12230.1	| Symbols: | Aldolase superfamily protein | chr1:4148050-4150708 FORWARD LENGTH=405	LOC_Os08g05830.1	protein|transaldolase, putative, expressed	NA	NA	GO:0005975|carbohydrate metabolic process GO:0006015|5-phosphoribose 1-diphosphate biosynthetic process GO:0006084|acetyl-CoA metabolic process GO:0009052|pentose-phosphate shunt, non-oxidative branch GO:0016126|sterol biosynthetic process GO:0016132|brassinosteroid biosynthetic process GO:0019344|cysteine biosynthetic process GO:0019658|glucose catabolic process to lactate and acetate	GO:0003824|catalytic activity GO:0004801|sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity GO:0008270|zinc ion binding	GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope
pt2_00008	A	A1S	Potri.001G120500	Potri.001G120500(AS)	POPTR_0001s00270	sp|Q9SUW0|TPPG_ARATH	Probable trehalose-phosphate phosphatase G OS=Arabidopsis thaliana GN=TPPG PE=2 SV=1	AT4G22590.1	| Symbols: TPPG | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr4:11893707-11895371 REVERSE LENGTH=377	LOC_Os10g40550.2	protein|CPuORF23 - conserved peptide uORF-containing transcript, expressed	IMGA|contig_64638_1.1	Trehalose 6-phosphate phosphatase contig_64638 1166-3461 E PREDN 20111014	GO:0005992|trehalose biosynthetic process GO:0008152|metabolic process	GO:0003824|catalytic activity GO:0004805|trehalose-phosphatase activity	GO:0005737|cytoplasm
pt2_00009	A	A1S	Potri.001G120600	Potri.001G120600(AS)	POPTR_0001s00280	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00010	A	A1S	Potri.005G139000	Potri.005G139000(AS)	POPTR_0001s00285	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00011	A	A1S	Potri.001G120700	Potri.001G120700(AS)	POPTR_0001s00290	NA	NA	AT4G22600.1	| Symbols: | unknown protein; Has 26 Blast hits to 26 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:11900211-11901032 REVERSE LENGTH=273	LOC_Os02g44250.1	protein|expressed protein	IMGA|contig_50934_1.1	Unknown protein contig_50934 1579-713 H PREDN 20111014	GO:0010584|pollen exine formation	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00012	B	B2S	Potri.001G120800	Potri.001G120800(BS) Potri.003G112200(DS)	POPTR_0001s00300	sp|Q8H038|KATAM_ORYSJ	Xyloglucan galactosyltransferase KATAMARI1 homolog OS=Oryza sativa subsp. japonica GN=Os03g0144800 PE=2 SV=1	AT4G22580.1	| Symbols: | Exostosin family protein | chr4:11889382-11890689 REVERSE LENGTH=435	LOC_Os10g40559.1	protein|exostosin family domain containing protein, expressed	IMGA|Medtr5g055350.1	Xyloglucan galactosyltransferase KATAMARI1 chr5 22252119-22253462 H EGN_Mt100125 20111014	NA	GO:0003824|catalytic activity	GO:0016020|membrane
pt2_00013	A	A1S	Potri.001G120900	Potri.001G120900(AS)	POPTR_0001s00310	sp|P49244|FABH1_CUPWR	3-oxoacyl-[acyl-carrier-protein] synthase 3 A, chloroplastic OS=Cuphea wrightii GN=KAS3A PE=2 SV=2	AT1G62640.2	| Symbols: KAS III | 3-ketoacyl-acyl carrier protein synthase III | chr1:23192502-23194737 FORWARD LENGTH=404	LOC_Os04g55060.1	protein|3-oxoacyl-synthase III, chloroplast precursor, putative, expressed	IMGA|Medtr5g009640.1	"beta-ketoacyl-acyl carrier protein synthase III, putative" chr5 2143615-2145784 H EGN_Mt100125 20111014	GO:0000038|very long-chain fatty acid metabolic process GO:0006084|acetyl-CoA metabolic process GO:0006633|fatty acid biosynthetic process GO:0008152|metabolic process GO:0008610|lipid biosynthetic process GO:0009409|response to cold GO:0016126|sterol biosynthetic process GO:0016132|brassinosteroid biosynthetic process GO:0042335|cuticle development	GO:0003824|catalytic activity GO:0004315|3-oxoacyl-[acyl-carrier-protein] synthase activity GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_00014	A	A1S	Potri.001G121000	Potri.001G121000(AS)	POPTR_0001s00320	sp|Q9FWW9|GSXL2_ARATH	Flavin-containing monooxygenase FMO GS-OX-like 2 OS=Arabidopsis thaliana GN=At1g12200 PE=2 SV=1	AT1G12200.1	| Symbols: | Flavin-binding monooxygenase family protein | chr1:4137627-4139835 FORWARD LENGTH=465	LOC_Os10g40570.1	protein|flavin-containing monooxygenase family protein, putative, expressed	IMGA|Medtr5g012130.1	Flavin-containing monooxygenase FMO GS-OX5 chr5 3350965-3347805 H EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0004497|monooxygenase activity GO:0004499|N,N-dimethylaniline monooxygenase activity GO:0050660|flavin adenine dinucleotide binding GO:0050661|NADP binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00015	A	A1S	Potri.001G121100	Potri.001G121100(AS)	POPTR_0001s00330	sp|Q94BV5|GSXL4_ARATH	Flavin-containing monooxygenase FMO GS-OX-like 4 OS=Arabidopsis thaliana GN=At1g62600 PE=2 SV=1	AT1G62600.1	| Symbols: | Flavin-binding monooxygenase family protein | chr1:23179542-23181411 FORWARD LENGTH=452	LOC_Os10g40570.1	protein|flavin-containing monooxygenase family protein, putative, expressed	IMGA|Medtr5g012130.1	Flavin-containing monooxygenase FMO GS-OX5 chr5 3350965-3347805 H EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0004497|monooxygenase activity GO:0004499|N,N-dimethylaniline monooxygenase activity GO:0050660|flavin adenine dinucleotide binding GO:0050661|NADP binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00016	A	A1S	Potri.001G121200	Potri.001G121200(AS)	POPTR_0001s00340	NA	NA	AT1G62530.2	| Symbols: | Plant protein of unknown function (DUF863) | chr1:23146332-23147386 REVERSE LENGTH=312	LOC_Os10g40580.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_00017	A	A2S	Potri.001G121300	Potri.001G121300(AS) Potri.003G111900(DS)	POPTR_0001s00350	sp|Q9SV15|WRK11_ARATH	Probable WRKY transcription factor 11 OS=Arabidopsis thaliana GN=WRKY11 PE=2 SV=2	AT4G31550.1	| Symbols: WRKY11, ATWRKY11 | WRKY DNA-binding protein 11 | chr4:15290065-15291458 REVERSE LENGTH=325	LOC_Os12g40570.2	protein|WRKY94, expressed	IMGA|Medtr1g009380.1	WRKY transcription factor chr1 1920992-1923320 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005516|calmodulin binding GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_00018	A	A1S	Potri.001G121400	Potri.001G121400(AS)	POPTR_0001s00360	sp|Q43199|APT1_WHEAT	Adenine phosphoribosyltransferase 1 OS=Triticum aestivum GN=APT1 PE=2 SV=1	AT4G22570.1	| Symbols: APT3 | adenine phosphoribosyl transferase 3 | chr4:11882310-11885250 REVERSE LENGTH=183	LOC_Os07g30150.1	protein|phosphoribosyl transferase, putative, expressed	IMGA|Medtr5g012210.1	Adenine phosphoribosyltransferase-like protein chr5 3374171-3378560 F EGN_Mt100125 20111014	GO:0006168|adenine salvage GO:0009116|nucleoside metabolic process	GO:0003999|adenine phosphoribosyltransferase activity	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_00019	A	A1S	Potri.001G121400	Potri.001G121400(AS)	POPTR_0001s00360	sp|Q43199|APT1_WHEAT	Adenine phosphoribosyltransferase 1 OS=Triticum aestivum GN=APT1 PE=2 SV=1	AT4G22570.1	| Symbols: APT3 | adenine phosphoribosyl transferase 3 | chr4:11882310-11885250 REVERSE LENGTH=183	LOC_Os07g30150.1	protein|phosphoribosyl transferase, putative, expressed	IMGA|Medtr5g012210.1	Adenine phosphoribosyltransferase-like protein chr5 3374171-3378560 F EGN_Mt100125 20111014	GO:0006168|adenine salvage GO:0009116|nucleoside metabolic process	GO:0003999|adenine phosphoribosyltransferase activity	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_00020	G	G1	NA	NA	POPTR_0001s00370	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00021	A	A1S	Potri.001G121600	Potri.001G121600(AS)	POPTR_0001s00380	NA	NA	AT4G22560.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G12450.1); Has 380 Blast hits to 380 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 6; Plants - 374; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:11880178-11880972 FORWARD LENGTH=264	LOC_Os02g44280.1	protein|zinc finger protein, putative, expressed	IMGA|Medtr5g012220.1	hypothetical protein chr5 3383612-3382740 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00022	A	A1S	Potri.001G121700	Potri.001G121700(AS)	POPTR_0001s00390	sp|Q940Y1|ORP2A_ARATH	Oxysterol-binding protein-related protein 2A OS=Arabidopsis thaliana GN=ORP2A PE=2 SV=1	AT4G22540.1	| Symbols: ORP2A | OSBP(oxysterol binding protein)-related protein 2A | chr4:11860969-11866108 REVERSE LENGTH=721	LOC_Os10g40590.1	protein|oxysterol-binding protein, putative, expressed	NA	NA	GO:0007165|signal transduction GO:0008202|steroid metabolic process	GO:0005543|phospholipid binding GO:0008142|oxysterol binding GO:0035091|phosphatidylinositol binding	GO:0005634|nucleus
pt2_00023	A	A1S	Potri.001G121700	Potri.001G121700(AS)	POPTR_0001s00390	sp|Q940Y1|ORP2A_ARATH	Oxysterol-binding protein-related protein 2A OS=Arabidopsis thaliana GN=ORP2A PE=2 SV=1	AT4G22540.1	| Symbols: ORP2A | OSBP(oxysterol binding protein)-related protein 2A | chr4:11860969-11866108 REVERSE LENGTH=721	LOC_Os10g40590.1	protein|oxysterol-binding protein, putative, expressed	NA	NA	GO:0007165|signal transduction GO:0008202|steroid metabolic process	GO:0005543|phospholipid binding GO:0008142|oxysterol binding GO:0035091|phosphatidylinositol binding	GO:0005634|nucleus
pt2_00024	A	A1S	Potri.001G121800	Potri.001G121800(AS)	POPTR_0001s00400	sp|P14009|14KD_DAUCA	14 kDa proline-rich protein DC2.15 OS=Daucus carota PE=2 SV=1	AT1G12100.1	| Symbols: | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr1:4095246-4095845 FORWARD LENGTH=132	LOC_Os03g01320.1	protein|LTPL116 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	IMGA|Medtr1g012700.1	14 kDa proline-rich protein DC2.15 chr1 3041200-3040682 E EGN_Mt100125 20111014	GO:0006869|lipid transport	GO:0008289|lipid binding	GO:0005576|extracellular region
pt2_00025	A	A3S	Potri.001G121900	Potri.001G121900(AS) Potri.T145400(AS) Potri.003G111400(DS)	POPTR_0001s00410	sp|P14009|14KD_DAUCA	14 kDa proline-rich protein DC2.15 OS=Daucus carota PE=2 SV=1	AT1G62510.1	| Symbols: | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr1:23136632-23137081 REVERSE LENGTH=149	LOC_Os03g01320.1	protein|LTPL116 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	IMGA|Medtr1g012630.1	14 kDa proline-rich protein DC2.15 chr1 3021443-3020811 I EGN_Mt100125 20111014	GO:0006869|lipid transport	GO:0008289|lipid binding	GO:0005576|extracellular region
pt2_00026	A	A1S	Potri.001G122000	Potri.001G122000(AS)	POPTR_0001s00415	NA	NA	AT4G12550.1	| Symbols: AIR1 | Auxin-Induced in Root cultures 1 | chr4:7439176-7439511 FORWARD LENGTH=111	NA	NA	NA	NA	GO:0006869|lipid transport GO:0009653|anatomical structure morphogenesis GO:0009733|response to auxin stimulus GO:0010102|lateral root morphogenesis GO:0048364|root development GO:0048527|lateral root development GO:0048589|developmental growth GO:0048765|root hair cell differentiation GO:0048767|root hair elongation GO:0048869|cellular developmental process	GO:0008289|lipid binding	GO:0005576|extracellular region
pt2_00027	A	A1S	Potri.001G122100	Potri.001G122100(AS)	POPTR_0001s00420	sp|Q8RW93|LBP65_ARATH	Putative lipid-binding protein At4g00165 OS=Arabidopsis thaliana GN=At4g00165 PE=2 SV=1	AT4G12480.1	| Symbols: pEARLI 1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr4:7406371-7406877 REVERSE LENGTH=168	LOC_Os10g40520.1	protein|LTPL145 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	IMGA|Medtr1g012700.1	14 kDa proline-rich protein DC2.15 chr1 3041200-3040682 E EGN_Mt100125 20111014	GO:0006869|lipid transport	NA	GO:0005575|cellular_component
pt2_00028	A	A1S	Potri.001G122200	Potri.001G122200(AS)	POPTR_0001s00430	sp|Q9FGK0|NDUB8_ARATH	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Arabidopsis thaliana GN=At5g47570 PE=2 SV=1	AT5G47570.1	| Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:19292869-19294666 REVERSE LENGTH=125	LOC_Os10g40410.2	protein|expressed protein	NA	NA	GO:0006511|ubiquitin-dependent protein catabolic process GO:0008150|biological_process GO:0009853|photorespiration GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	GO:0003674|molecular_function	GO:0005747|mitochondrial respiratory chain complex I
pt2_00029	A	A1S	Potri.001G122400	Potri.001G122400(AS)	POPTR_0001s00440	sp|P22989|LDHB_HORVU	L-lactate dehydrogenase B (Fragment) OS=Hordeum vulgare PE=1 SV=1	AT4G17260.1	| Symbols: | Lactate/malate dehydrogenase family protein | chr4:9674057-9675309 FORWARD LENGTH=353	LOC_Os02g01510.1	protein|lactate/malate dehydrogenase, putative, expressed	IMGA|Medtr5g012390.1	L-lactate dehydrogenase chr5 3463249-3461953 E EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0006096|glycolysis GO:0009651|response to salt stress GO:0009737|response to abscisic acid stimulus GO:0044262|cellular carbohydrate metabolic process GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0004457|lactate dehydrogenase activity GO:0004459|L-lactate dehydrogenase activity GO:0016491|oxidoreductase activity GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane
pt2_00030	A	A2S	Potri.T145300	Potri.T145300(AS) Potri.001G122500(BS)	POPTR_0001s00450	NA	NA	AT4G16510.1	| Symbols: | YbaK/aminoacyl-tRNA synthetase-associated domain | chr4:9302816-9304869 FORWARD LENGTH=232	LOC_Os02g44330.1	protein|rho guanine nucleotide exchange factor, putative, expressed	NA	NA	NA	GO:0003674|molecular_function	NA
pt2_00031	A	A1S	Potri.001G122600	Potri.001G122600(AS)	POPTR_0001s00460	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00032	A	A2S	Potri.001G122700	Potri.001G122700(AS) Potri.003G110900(DS)	POPTR_0001s00470	sp|Q8VYK7|ATG8F_ARATH	Autophagy-related protein 8f OS=Arabidopsis thaliana GN=ATG8F PE=2 SV=1	AT4G16520.2	| Symbols: ATG8F | Ubiquitin-like superfamily protein | chr4:9306882-9308113 REVERSE LENGTH=121	LOC_Os08g09240.2	protein|autophagy-related protein, putative, expressed	NA	NA	GO:0006914|autophagy	GO:0008017|microtubule binding	NA
pt2_00033	A	A1S	Potri.001G122800	Potri.001G122800(AS)	POPTR_0001s00480	sp|O81316|SCL6_ARATH	Scarecrow-like protein 6 OS=Arabidopsis thaliana GN=SCL6 PE=1 SV=1	AT4G00150.1	| Symbols: HAM3, ATHAM3, LOM3 | GRAS family transcription factor | chr4:57429-59105 REVERSE LENGTH=558	LOC_Os04g46860.1	protein|scarecrow, putative, expressed	IMGA|Medtr5g019750.1	GRAS family transcription factor chr5 7232386-7230690 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0007623|circadian rhythm GO:0010492|maintenance of shoot apical meristem identity GO:0030154|cell differentiation GO:0048768|root hair cell tip growth	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_00034	A	A1S	Potri.001G122900	Potri.001G122900(AS)	POPTR_0001s00490	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00035	A	A1S	Potri.001G123000	Potri.001G123000(AS)	POPTR_0001s00500	NA	NA	AT2G35736.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G25225.1). | chr2:15023084-15023254 REVERSE LENGTH=56	LOC_Os07g13534.1	protein|expressed protein	IMGA|Medtr5g012410.1	hypothetical protein chr5 3473142-3473339 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_00036	A	A1S	Potri.001G123100	Potri.001G123100(AS)	POPTR_0001s00510	NA	NA	AT5G47580.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:19294948-19297194 REVERSE LENGTH=748	NA	NA	NA	NA	GO:0006487|protein N-linked glycosylation GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_00037	B	B1S	Potri.003G110700	Potri.003G110700(BS)	POPTR_0001s00520	NA	NA	AT5G47580.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:19294948-19297194 REVERSE LENGTH=748	NA	NA	NA	NA	GO:0006914|autophagy GO:0010286|heat acclimation	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_00038	A	A1S	Potri.001G123200	Potri.001G123200(AS)	POPTR_0001s00530	NA	NA	AT4G16530.1	| Symbols: | Family of unknown function (DUF577) | chr4:9311355-9315554 FORWARD LENGTH=803	LOC_Os10g36340.2	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_00039	A	A1S	Potri.001G123300	Potri.001G123300(AS)	POPTR_0001s00540	NA	NA	AT4G19980.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: root, pedicel; EXPRESSED DURING: 4 anthesis; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:10828153-10828536 REVERSE LENGTH=127	NA	NA	IMGA|contig_74967_1.1	Unknown protein contig_74967 838-485 H PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_00040	A	A1S	Potri.001G123400	Potri.001G123400(AS)	POPTR_0001s00550	sp|Q9S775|PKL_ARATH	CHD3-type chromatin-remodeling factor PICKLE OS=Arabidopsis thaliana GN=PKL PE=1 SV=1	AT5G44800.1	| Symbols: CHR4, PKR1 | chromatin remodeling 4 | chr5:18083659-18092162 REVERSE LENGTH=2223	LOC_Os07g31450.1	protein|CHR4/MI-2-LIKE, putative, expressed	IMGA|Medtr5g090090.1	Chromodomain-helicase-DNA-binding protein chr5 38180814-38157967 E EGN_Mt100125 20111014	GO:0006333|chromatin assembly or disassembly	GO:0003676|nucleic acid binding GO:0003677|DNA binding GO:0003682|chromatin binding GO:0004386|helicase activity GO:0005524|ATP binding GO:0008270|zinc ion binding	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_00041	A	A1S	Potri.001G123500	Potri.001G123500(AS)	POPTR_0001s00560	sp|Q05609|CTR1_ARATH	Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana GN=CTR1 PE=1 SV=1	AT2G35050.1	| Symbols: | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain | chr2:14769708-14774796 FORWARD LENGTH=1257	LOC_Os07g25680.1	protein|protein kinase domain containing protein, expressed	IMGA|Medtr5g010730.1	Tyrosine-protein kinase Lyn chr5 2690961-2684872 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006486|protein glycosylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004712|protein serine/threonine/tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005575|cellular_component GO:0005634|nucleus GO:0005829|cytosol
pt2_00042	A	A1S	Potri.001G123600	Potri.001G123600(AS)	POPTR_0001s00570	sp|Q9C641|EFGM_ARATH	Elongation factor G, mitochondrial OS=Arabidopsis thaliana GN=At1g45332 PE=1 SV=1	AT1G45332.1	| Symbols: | Translation elongation factor EFG/EF2 protein | chr1:17172507-17176683 REVERSE LENGTH=754	LOC_Os03g36780.1	protein|elongation factor, putative, expressed	IMGA|Medtr5g083100.1	Elongation factor G chr5 34841961-34845519 I EGN_Mt100125 20111014	GO:0006414|translational elongation	GO:0003746|translation elongation factor activity GO:0003924|GTPase activity GO:0005524|ATP binding GO:0005525|GTP binding GO:0008135|translation factor activity, nucleic acid binding	GO:0005622|intracellular GO:0005739|mitochondrion
pt2_00043	A	A1S	Potri.001G123700	Potri.001G123700(AS)	POPTR_0001s00580	sp|O64769|POT11_ARATH	Potassium transporter 11 OS=Arabidopsis thaliana GN=POT11 PE=1 SV=1	AT2G35060.1	| Symbols: KUP11 | K+ uptake permease 11 | chr2:14775184-14778184 REVERSE LENGTH=792	LOC_Os04g52390.1	protein|potassium transporter, putative, expressed	IMGA|Medtr5g034500.1	Potassium transporter chr5 14551180-14556499 E EGN_Mt100125 20111014	GO:0006813|potassium ion transport GO:0009555|pollen development GO:0071805|potassium ion transmembrane transport	GO:0015079|potassium ion transmembrane transporter activity	GO:0005737|cytoplasm GO:0005886|plasma membrane GO:0016020|membrane
pt2_00044	A	A1S	Potri.001G123800	Potri.001G123800(AS)	POPTR_0001s00590	sp|O64769|POT11_ARATH	Potassium transporter 11 OS=Arabidopsis thaliana GN=POT11 PE=1 SV=1	AT2G35060.1	| Symbols: KUP11 | K+ uptake permease 11 | chr2:14775184-14778184 REVERSE LENGTH=792	LOC_Os04g52390.1	protein|potassium transporter, putative, expressed	IMGA|Medtr5g034500.1	Potassium transporter chr5 14551180-14556499 E EGN_Mt100125 20111014	GO:0006813|potassium ion transport GO:0009555|pollen development GO:0071805|potassium ion transmembrane transport	GO:0015079|potassium ion transmembrane transporter activity	GO:0005737|cytoplasm GO:0005886|plasma membrane GO:0016020|membrane
pt2_00045	A	A1S	Potri.001G123900	Potri.001G123900(AS)	POPTR_0001s00600	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00046	A	A2S	Potri.001G124000	Potri.001G124000(AS) Potri.003G109400(DS)	POPTR_0001s00610	sp|Q8VYC8|RIN2_ARATH	E3 ubiquitin protein ligase RIN2 OS=Arabidopsis thaliana GN=RIN2 PE=1 SV=1	AT4G25230.2	| Symbols: RIN2 | RPM1 interacting protein 2 | chr4:12924446-12928671 FORWARD LENGTH=578	LOC_Os07g30100.1	protein|RIN3, putative, expressed	IMGA|Medtr5g007710.1	E3 ubiquitin-protein ligase synoviolin chr5 1233249-1237930 E EGN_Mt100125 20111014	GO:0034052|positive regulation of plant-type hypersensitive response	GO:0004842|ubiquitin-protein ligase activity GO:0005515|protein binding GO:0008270|zinc ion binding	GO:0005886|plasma membrane
pt2_00047	A	A1S	Potri.001G124100	Potri.001G124100(AS)	POPTR_0001s00620	NA	NA	AT4G25225.1	| Symbols: | unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35736.2); Has 78 Blast hits to 78 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:12923086-12923256 REVERSE LENGTH=56	LOC_Os07g13534.1	protein|expressed protein	IMGA|Medtr5g012410.1	hypothetical protein chr5 3473142-3473339 H EGN_Mt100125 20111014	NA	NA	NA
pt2_00048	A	A1S	Potri.001G124200	Potri.001G124200(AS)	POPTR_0001s00630	sp|Q9C5L3|GLPT1_ARATH	Putative glycerol-3-phosphate transporter 1 OS=Arabidopsis thaliana GN=At3g47420 PE=2 SV=1	AT3G47420.1	| Symbols: ATPS3, PS3 | phosphate starvation-induced gene 3 | chr3:17472541-17474209 REVERSE LENGTH=523	LOC_Os04g46880.2	protein|transporter, major facilitator family, putative, expressed	NA	NA	GO:0008643|carbohydrate transport GO:0055062|phosphate ion homeostasis GO:0055085|transmembrane transport	GO:0005351|sugar:hydrogen symporter activity	GO:0016021|integral to membrane
pt2_00049	A	A1S	Potri.001G124300	Potri.001G124300(AS)	POPTR_0001s00640	sp|Q3SX41|LC7L3_BOVIN	Luc7-like protein 3 OS=Bos taurus GN=LUC7L3 PE=2 SV=1	AT5G51410.3	| Symbols: | LUC7 N_terminus domain-containing protein | chr5:20881821-20883577 REVERSE LENGTH=334	LOC_Os07g27300.2	protein|RNA-binding protein Luc7-like, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003723|RNA binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00050	A	A1S	Potri.001G124400	Potri.001G124400(AS)	POPTR_0001s00650	sp|Q7XU74|PX114_ORYSJ	Peroxisomal membrane protein 11-4 OS=Oryza sativa subsp. japonica GN=PEX11-4 PE=2 SV=2	AT3G47430.1	| Symbols: PEX11B | peroxin 11B | chr3:17480798-17481692 FORWARD LENGTH=227	LOC_Os04g45210.1	protein|peroxisomal biogenesis factor 11, putative, expressed	NA	NA	GO:0006098|pentose-phosphate shunt GO:0007031|peroxisome organization GO:0016559|peroxisome fission	GO:0003674|molecular_function GO:0005515|protein binding GO:0042802|identical protein binding	GO:0005777|peroxisome GO:0005778|peroxisomal membrane GO:0005779|integral to peroxisomal membrane
pt2_00051	A	A1S	Potri.001G124500	Potri.001G124500(AS)	POPTR_0001s00660	sp|B6SGC5|CNR6_MAIZE	Cell number regulator 6 OS=Zea mays GN=CNR6 PE=2 SV=1	AT5G51400.1	| Symbols: | PLAC8 family protein | chr5:20878784-20880036 REVERSE LENGTH=241	LOC_Os03g01210.2	protein|uncharacterized Cys-rich domain containing protein, putative, expressed	IMGA|Medtr5g065810.1	hypothetical protein chr5 26714435-26712911 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005886|plasma membrane
pt2_00052	A	A1S	Potri.001G124600	Potri.001G124600(AS)	POPTR_0001s00670	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00053	A	A2S	Potri.001G124700	Potri.001G124700(AS) Potri.003G108700(DS)	POPTR_0001s00680	NA	NA	NA	NA	NA	NA	NA	NA	NA	GO:0003777|microtubule motor activity	GO:0005737|cytoplasm GO:0005875|microtubule associated complex
pt2_00054	B	B1S	Potri.001G124800	Potri.001G124800(BS)	POPTR_0001s00690	sp|Q9STX9|TIP51_ARATH	Probable aquaporin TIP5-1 OS=Arabidopsis thaliana GN=TIP5-1 PE=2 SV=1	AT3G47440.1	| Symbols: TIP5;1 | tonoplast intrinsic protein 5;1 | chr3:17482054-17482987 FORWARD LENGTH=256	LOC_Os04g46490.1	protein|aquaporin protein, putative, expressed	IMGA|Medtr5g012810.1	Aquaporin TIP2-3 chr5 3671983-3673705 F EGN_Mt100125 20111014	GO:0006810|transport GO:0015840|urea transport GO:0048235|pollen sperm cell differentiation	GO:0005215|transporter activity GO:0015204|urea transmembrane transporter activity GO:0015250|water channel activity	GO:0005576|extracellular region GO:0005739|mitochondrion GO:0016020|membrane GO:0090406|pollen tube
pt2_00055	A	A1S	Potri.001G124900	Potri.001G124900(AS)	POPTR_0001s00700	sp|Q66GP9|NOS1_ARATH	Nitric oxide synthase 1 OS=Arabidopsis thaliana GN=NOS1 PE=1 SV=1	AT3G47450.2	| Symbols: ATNOS1, NOS1, ATNOA1, NOA1, RIF1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr3:17483195-17486249 REVERSE LENGTH=561	LOC_Os02g01440.1	protein|nitric oxide synthase 1, putative, expressed	NA	NA	GO:0006364|rRNA processing GO:0006399|tRNA metabolic process GO:0006655|phosphatidylglycerol biosynthetic process GO:0006809|nitric oxide biosynthetic process GO:0006897|endocytosis GO:0006979|response to oxidative stress GO:0009651|response to salt stress GO:0009657|plastid organization GO:0009658|chloroplast organization GO:0009793|embryo development ending in seed dormancy GO:0009902|chloroplast relocation GO:0009965|leaf morphogenesis GO:0010027|thylakoid membrane organization GO:0010193|response to ozone GO:0010228|vegetative to reproductive phase transition of meristem GO:0010322|regulation of isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0016226|iron-sulfur cluster assembly GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0030154|cell differentiation GO:0034660|ncRNA metabolic process GO:0042793|transcription from plastid promoter GO:0045893|positive regulation of transcription, DNA-dependent GO:0048366|leaf development GO:0048481|ovule development GO:0051246|regulation of protein metabolic process	GO:0003924|GTPase activity GO:0005525|GTP binding	GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_00056	A	A1S	Potri.001G125000	Potri.001G125000(AS)	POPTR_0001s00710	sp|Q9C5Y4|SMC21_ARATH	Structural maintenance of chromosomes protein 2-1 OS=Arabidopsis thaliana GN=SMC2-1 PE=2 SV=2	AT5G62410.1	| Symbols: SMC2, TTN3, ATCAP-E1, ATSMC4 | structural maintenance of chromosomes 2 | chr5:25056308-25062436 FORWARD LENGTH=1175	LOC_Os01g67740.1	protein|chromosome segregation protein, putative, expressed	IMGA|contig_11477_1.1	Structural maintenance of chromosomes contig_11477 340-2276 E PREDN 20111014	GO:0006260|DNA replication GO:0006261|DNA-dependent DNA replication GO:0006270|DNA replication initiation GO:0006275|regulation of DNA replication GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0006346|methylation-dependent chromatin silencing GO:0008283|cell proliferation GO:0009909|regulation of flower development GO:0010267|production of ta-siRNAs involved in RNA interference GO:0010389|regulation of G2/M transition of mitotic cell cycle GO:0016458|gene silencing GO:0016570|histone modification GO:0031047|gene silencing by RNA GO:0031048|chromatin silencing by small RNA GO:0034968|histone lysine methylation GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0048449|floral organ formation GO:0051276|chromosome organization GO:0051567|histone H3-K9 methylation GO:0051607|defense response to virus GO:0051726|regulation of cell cycle	GO:0005215|transporter activity GO:0005524|ATP binding	GO:0000796|condensin complex GO:0005634|nucleus GO:0005694|chromosome
pt2_00057	A	A1S	Potri.001G125200	Potri.001G125200(AS)	POPTR_0001s00720	NA	NA	AT3G24080.2	| Symbols: | KRR1 family protein | chr3:8695191-8697107 REVERSE LENGTH=630	LOC_Os05g41100.1	protein|protein kri1, putative, expressed	NA	NA	NA	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005829|cytosol
pt2_00058	A	A1S	Potri.001G125300	Potri.001G125300(AS)	POPTR_0001s00730	sp|A0JP85|CNOT1_XENTR	CCR4-NOT transcription complex subunit 1 OS=Xenopus tropicalis GN=cnot1 PE=2 SV=1	AT1G02080.2	| Symbols: | transcription regulators | chr1:373694-386682 FORWARD LENGTH=2377	LOC_Os10g40780.3	protein|CCR4-Not complex component, Not1domain containing protein, expressed	NA	NA	GO:0000226|microtubule cytoskeleton organization GO:0007155|cell adhesion GO:0010090|trichome morphogenesis GO:0045010|actin nucleation	NA	GO:0005829|cytosol GO:0016020|membrane
pt2_00059	A	A1S	Potri.001G125400	Potri.001G125400(AS)	POPTR_0001s00750	sp|Q0PGJ6|AKRC9_ARATH	Aldo-keto reductase family 4 member C9 OS=Arabidopsis thaliana GN=AKR4C9 PE=1 SV=1	AT5G62420.1	| Symbols: | NAD(P)-linked oxidoreductase superfamily protein | chr5:25064835-25066111 FORWARD LENGTH=316	LOC_Os03g13390.2	protein|oxidoreductase, aldo/keto reductase family protein, putative, expressed	IMGA|Medtr5g097940.1	Reductase chr5 41850889-41852347 F EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity	GO:0005737|cytoplasm
pt2_00060	B	B1S	Potri.001G125500	Potri.001G125500(BS)	POPTR_0001s00760	NA	NA	AT1G76520.2	| Symbols: | Auxin efflux carrier family protein | chr1:28715384-28717289 FORWARD LENGTH=390	LOC_Os09g31478.1	protein|auxin efflux carrier component, putative, expressed	IMGA|Medtr5g024970.1	Auxin efflux carrier protein chr5 9837511-9840517 F EGN_Mt100125 20111014	GO:0009926|auxin polar transport GO:0055085|transmembrane transport	GO:0009672|auxin:hydrogen symporter activity	GO:0016021|integral to membrane
pt2_00061	A	A1S	Potri.001G125600	Potri.001G125600(AS)	POPTR_0001s00770	sp|P42654|1433B_VICFA	14-3-3-like protein B OS=Vicia faba PE=2 SV=1	AT2G42590.2	| Symbols: GRF9, GF14 MU | general regulatory factor 9 | chr2:17732118-17733775 REVERSE LENGTH=262	LOC_Os08g33370.1	protein|14-3-3 protein, putative, expressed	IMGA|Medtr5g044160.1	14-3-3-like protein GF14 iota chr5 18998222-19001446 F EGN_Mt100125 20111014	GO:0006096|glycolysis GO:0006833|water transport GO:0006972|hyperosmotic response GO:0007030|Golgi organization GO:0009266|response to temperature stimulus GO:0009651|response to salt stress GO:0009750|response to fructose stimulus GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019344|cysteine biosynthetic process GO:0032880|regulation of protein localization GO:0042744|hydrogen peroxide catabolic process GO:0046686|response to cadmium ion GO:0048528|post-embryonic root development	GO:0005509|calcium ion binding GO:0019904|protein domain specific binding GO:0045309|protein phosphorylated amino acid binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane GO:0009570|chloroplast stroma
pt2_00062	A	A2S	Potri.001G125700	Potri.001G125700(AS) Potri.003G108000(DS)	POPTR_0001s00780	sp|Q8U4K7|PGK2_PYRFU	2-phosphoglycerate kinase OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=pgk2 PE=3 SV=1	AT5G61450.1	| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:24710240-24712882 REVERSE LENGTH=447	LOC_Os07g28260.6	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00063	A	A1S	Potri.001G125800	Potri.001G125800(AS)	POPTR_0001s00790	sp|Q8VYT5|FB254_ARATH	F-box protein At5g07670 OS=Arabidopsis thaliana GN=At5g07670 PE=2 SV=1	AT5G07670.1	| Symbols: | RNI-like superfamily protein | chr5:2430421-2432065 FORWARD LENGTH=476	LOC_Os02g44104.1	protein|F-box family protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00064	C	C1S	Potri.001G125900	Potri.001G125900(CS)	sp|Q9M202|ZAT9_ARATH	Zinc finger protein ZAT9 OS=Arabidopsis thaliana GN=ZAT9 PE=2 SV=1	AT3G60580.1	| Symbols: | C2H2-like zinc finger protein | chr3:22394007-22394873 FORWARD LENGTH=288	LOC_Os10g40660.1	protein|ZOS10-07 - C2H2 zinc finger protein, expressed	IMGA|Medtr1g106730.1	Zinc finger protein chr1 31397508-31398593 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003676|nucleic acid binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_00065	A	A1S	Potri.001G126000	Potri.001G126000(AS)	POPTR_0001s00810	NA	NA	AT4G25190.1	| Symbols: QWRF7 | Family of unknown function (DUF566) | chr4:12914400-12916001 REVERSE LENGTH=394	LOC_Os10g40620.1	protein|expressed protein	IMGA|Medtr1g018440.1	hypothetical protein chr1 5485437-5481464 H EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005634|nucleus
pt2_00066	A	A1S	Potri.001G126100	Potri.001G126100(AS)	POPTR_0001s00820	sp|Q9FII5|TDR_ARATH	Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana GN=TDR PE=1 SV=1	AT5G61480.1	| Symbols: PXY | Leucine-rich repeat protein kinase family protein | chr5:24724541-24727842 REVERSE LENGTH=1041	LOC_Os08g05290.1	protein|receptor-like protein kinase 5 precursor, putative, expressed	IMGA|contig_53710_1.1	Receptor-like protein kinase contig_53710 698-4054 H PREDN 20111014	GO:0006468|protein phosphorylation GO:0009855|determination of bilateral symmetry GO:0009887|organ morphogenesis GO:0009944|polarity specification of adaxial/abaxial axis GO:0010014|meristem initiation GO:0010051|xylem and phloem pattern formation GO:0010067|procambium histogenesis GO:0010073|meristem maintenance GO:0010075|regulation of meristem growth GO:0010089|xylem development GO:0010223|secondary shoot formation GO:0048439|flower morphogenesis GO:0048519|negative regulation of biological process	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005515|protein binding GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_00067	A	A1S	Potri.001G126200	Potri.001G126200(AS)	POPTR_0001s00830	sp|Q54IV7|RFT1_DICDI	Protein RFT1 homolog OS=Dictyostelium discoideum GN=rft1 PE=3 SV=1	AT5G07630.1	| Symbols: | lipid transporters | chr5:2410703-2414523 FORWARD LENGTH=611	LOC_Os07g30250.1	protein|RFT1, putative, expressed	IMGA|contig_63354_3.1	Nuclear division RFT1-like protein contig_63354 5648-6260 F PREDN 20111014	GO:0000280|nuclear division GO:0006869|lipid transport	GO:0005319|lipid transporter activity	GO:0016020|membrane GO:0016021|integral to membrane
pt2_00068	A	A1S	Potri.001G126300	Potri.001G126300(AS)	POPTR_0001s00840	NA	NA	AT4G25170.1	| Symbols: | Uncharacterised conserved protein (UCP012943) | chr4:12909740-12911389 FORWARD LENGTH=344	LOC_Os02g44010.2	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_00069	A	A1S	Potri.001G126400	Potri.001G126400(AS)	POPTR_0001s00850	sp|P0CO44|BBP_CRYNJ	Branchpoint-bridging protein OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=BBP PE=3 SV=1	AT5G51300.3	| Symbols: | splicing factor-related | chr5:20849881-20852295 REVERSE LENGTH=804	LOC_Os04g31620.1	protein|retrotransposon protein, putative, unclassified, expressed	IMGA|Medtr5g075710.3	KH domain-containing protein chr5 31223217-31220331 F EGN_Mt100125 20111014	GO:0000398|mRNA splicing, via spliceosome GO:0008380|RNA splicing	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_00070	A	A2S	Potri.T173300	Potri.T173300(AS) Potri.001G126500(AS)	POPTR_0001s00860	sp|Q0WWQ1|ATG3_ARATH	Autophagy-related protein 3 OS=Arabidopsis thaliana GN=ATG3 PE=2 SV=2	AT5G61500.1	| Symbols: ATATG3, ATG3 | autophagy 3 (APG3) | chr5:24734216-24736711 REVERSE LENGTH=313	LOC_Os01g10290.2	protein|autophagy-related protein 3, putative, expressed	IMGA|contig_60121_1.1	Autophagy-related protein contig_60121 880-2716 E PREDN 20111014	GO:0000902|cell morphogenesis GO:0006623|protein targeting to vacuole GO:0006914|autophagy GO:0016049|cell growth GO:0016192|vesicle-mediated transport GO:0048193|Golgi vesicle transport	GO:0003674|molecular_function	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_00071	C	C1S	Potri.001G126600	Potri.001G126600(CS)	NA	NA	AT4G23340.1	| Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr4:12195719-12196793 REVERSE LENGTH=324	NA	NA	NA	NA	GO:0009686|gibberellin biosynthetic process GO:0048767|root hair elongation GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	NA
pt2_00072	A	A1S	Potri.001G126700	Potri.001G126700(AS)	POPTR_0001s00880	sp|Q0A5W2|BIOF_ALHEH	8-amino-7-oxononanoate synthase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=bioF PE=3 SV=1	AT5G04620.2	| Symbols: ATBIOF, BIOF | biotin F | chr5:1327292-1329934 FORWARD LENGTH=476	LOC_Os01g53450.1	protein|aminotransferase, classes I and II, domain containing protein, expressed	NA	NA	GO:0009058|biosynthetic process GO:0009102|biotin biosynthetic process	GO:0003824|catalytic activity GO:0008483|transaminase activity GO:0008710|8-amino-7-oxononanoate synthase activity GO:0016740|transferase activity GO:0030170|pyridoxal phosphate binding	GO:0005739|mitochondrion GO:0005829|cytosol
pt2_00073	G	G1	NA	NA	POPTR_0001s00890	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00074	A	A1S	Potri.001G126900	Potri.001G126900(AS)	POPTR_0001s00900	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00075	A	A1S	Potri.001G127000	Potri.001G127000(AS)	POPTR_0001s00910	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00076	A	A1S	Potri.001G127100	Potri.001G127100(AS)	POPTR_0001s00920	sp|Q9SJJ7|ATL57_ARATH	RING-H2 finger protein ATL57 OS=Arabidopsis thaliana GN=ATL57 PE=2 SV=1	AT5G45290.1	| Symbols: | RING/U-box superfamily protein | chr5:18350011-18352092 REVERSE LENGTH=545	LOC_Os05g32350.1	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr5g026260.1	RING finger protein chr5 10530462-10526071 E EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_00077	C	C1S	Potri.001G127200	Potri.001G127200(CS)	NA	NA	NA	NA	NA	NA	NA	NA	GO:0042545|cell wall modification	GO:0004857|enzyme inhibitor activity GO:0030599|pectinesterase activity	GO:0005576|extracellular region GO:0005618|cell wall GO:0009505|plant-type cell wall GO:0016020|membrane
pt2_00078	A	A1S	Potri.001G127300	Potri.001G127300(AS)	POPTR_0001s00940	sp|Q93ZY2|ROGF1_ARATH	Rop guanine nucleotide exchange factor 1 OS=Arabidopsis thaliana GN=ROPGEF1 PE=1 SV=2	AT1G31650.1	| Symbols: ATROPGEF14, ROPGEF14 | RHO guanyl-nucleotide exchange factor 14 | chr1:11326474-11329767 REVERSE LENGTH=576	LOC_Os02g47420.3	protein|ATROPGEF7/ROPGEF7, putative, expressed	IMGA|Medtr5g025960.1	Rop guanine nucleotide exchange factor chr5 10363379-10356920 F EGN_Mt100125 20111014	GO:0019344|cysteine biosynthetic process	GO:0005089|Rho guanyl-nucleotide exchange factor activity	GO:0005739|mitochondrion
pt2_00079	A	A1S	Potri.001G127400	Potri.001G127400(AS)	POPTR_0001s00950	sp|Q8GT20|BEBT_TOBAC	Benzyl alcohol O-benzoyltransferase OS=Nicotiana tabacum GN=HSR201 PE=1 SV=1	AT5G17540.1	| Symbols: | HXXXD-type acyl-transferase family protein | chr5:5782061-5783682 REVERSE LENGTH=461	LOC_Os10g35950.1	protein|transferase family protein, putative, expressed	IMGA|Medtr5g076700.1	Benzoyl coenzyme A benzyl alcohol benzoyl transferase chr5 31729976-31732699 H EGN_Mt100125 20111014	NA	GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_00080	A	A1S	Potri.001G127500	Potri.001G127500(AS)	POPTR_0001s00960	sp|P83326|PMEI_ACTDE	Pectinesterase inhibitor OS=Actinidia deliciosa GN=PMEI PE=1 SV=2	AT4G02250.1	| Symbols: | Plant invertase/pectin methylesterase inhibitor superfamily protein | chr4:983970-984523 FORWARD LENGTH=160	LOC_Os01g20970.1	protein|invertase/pectin methylesterase inhibitor family protein, putative, expressed	NA	NA	NA	GO:0004857|enzyme inhibitor activity GO:0030599|pectinesterase activity GO:0046910|pectinesterase inhibitor activity	NA
pt2_00081	A	A1S	Potri.001G127600	Potri.001G127600(AS)	POPTR_0001s00970	sp|Q8GT20|BEBT_TOBAC	Benzyl alcohol O-benzoyltransferase OS=Nicotiana tabacum GN=HSR201 PE=1 SV=1	AT5G17540.1	| Symbols: | HXXXD-type acyl-transferase family protein | chr5:5782061-5783682 REVERSE LENGTH=461	LOC_Os10g35950.1	protein|transferase family protein, putative, expressed	IMGA|Medtr5g076700.1	Benzoyl coenzyme A benzyl alcohol benzoyl transferase chr5 31729976-31732699 H EGN_Mt100125 20111014	NA	GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_00082	A	A1S	Potri.001G127700	Potri.001G127700(AS)	POPTR_0001s00990	sp|Q94B74|NUDT2_ARATH	Nudix hydrolase 2 OS=Arabidopsis thaliana GN=NUDT2 PE=1 SV=1	AT5G47650.1	| Symbols: ATNUDT2, ATNUDX2, NUDT2 | nudix hydrolase homolog 2 | chr5:19310391-19312084 REVERSE LENGTH=278	LOC_Os06g42790.2	protein|hydrolase, NUDIX family, domain containing protein, expressed	NA	NA	GO:0000165|MAPK cascade GO:0002679|respiratory burst involved in defense response GO:0002831|regulation of response to biotic stimulus GO:0006612|protein targeting to membrane GO:0006944|cellular membrane fusion GO:0006950|response to stress GO:0006979|response to oxidative stress GO:0009409|response to cold GO:0009595|detection of biotic stimulus GO:0009611|response to wounding GO:0009626|plant-type hypersensitive response GO:0009627|systemic acquired resistance GO:0009651|response to salt stress GO:0009697|salicylic acid biosynthetic process GO:0009738|abscisic acid mediated signaling pathway GO:0009814|defense response, incompatible interaction GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009870|defense response signaling pathway, resistance gene-dependent GO:0010193|response to ozone GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0010581|regulation of starch biosynthetic process GO:0019684|photosynthesis, light reaction GO:0030968|endoplasmic reticulum unfolded protein response GO:0031348|negative regulation of defense response GO:0035556|intracellular signal transduction GO:0042742|defense response to bacterium GO:0043069|negative regulation of programmed cell death GO:0043900|regulation of multi-organism process GO:0045087|innate immune response GO:0050832|defense response to fungus GO:0051707|response to other organism GO:0070212|protein poly-ADP-ribosylation	GO:0000210|NAD+ diphosphatase activity GO:0005515|protein binding GO:0016787|hydrolase activity GO:0017110|nucleoside-diphosphatase activity GO:0047631|ADP-ribose diphosphatase activity GO:0051287|NAD binding GO:0080041|ADP-ribose pyrophosphohydrolase activity GO:0080042|ADP-glucose pyrophosphohydrolase activity	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane
pt2_00083	A	A1S	Potri.001G127800	Potri.001G127800(AS)	POPTR_0001s01000	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00084	A	A1S	Potri.001G127900	Potri.001G127900(AS)	POPTR_0001s01010	NA	NA	AT4G27870.1	| Symbols: | Vacuolar iron transporter (VIT) family protein | chr4:13878983-13882679 FORWARD LENGTH=761	LOC_Os06g01440.1	protein|integral membrane protein, putative, expressed	IMGA|Medtr5g068580.1	Integral membrane protein-like protein chr5 28055302-28049489 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0016020|membrane GO:0016021|integral to membrane
pt2_00085	A	A1S	Potri.001G128100	Potri.001G128100(AS)	POPTR_0001s01020	sp|Q8GSM7|HCT_TOBAC	Hydroxycinnamoyl-Coenzyme A shikimate/quinate hydroxycinnamoyltransferase OS=Nicotiana tabacum GN=HCT PE=1 SV=1	AT1G31490.1	| Symbols: | HXXXD-type acyl-transferase family protein | chr1:11271744-11273078 REVERSE LENGTH=444	LOC_Os01g15709.1	protein|transferase family protein, putative, expressed	IMGA|Medtr5g026320.1	Omega-hydroxypalmitate O-feruloyl transferase chr5 10563439-10564838 E EGN_Mt100125 20111014	GO:0009308|amine metabolic process GO:0055114|oxidation-reduction process	GO:0005507|copper ion binding GO:0008131|primary amine oxidase activity GO:0016740|transferase activity GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups GO:0048038|quinone binding	GO:0005737|cytoplasm GO:0009507|chloroplast
pt2_00086	A	A1S	Potri.001G128200	Potri.001G128200(AS)	POPTR_0001s01040	NA	NA	AT4G19450.1	| Symbols: | Major facilitator superfamily protein | chr4:10606538-10609218 FORWARD LENGTH=572	LOC_Os12g01570.1	protein|nodulin, putative, expressed	IMGA|Medtr5g026350.1	hypothetical protein chr5 10578687-10583023 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_00087	A	A1S	Potri.001G128300	Potri.001G128300(AS)	POPTR_0001s01050	sp|D1BZ82|MSHA_XYLCX	D-inositol 3-phosphate glycosyltransferase OS=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) GN=mshA PE=3 SV=1	AT4G19460.1	| Symbols: | UDP-Glycosyltransferase superfamily protein | chr4:10610422-10611972 REVERSE LENGTH=516	LOC_Os01g46430.1	protein|glycosyl transferase, group 1 domain containing protein, expressed	IMGA|Medtr5g026360.1	Capsular polysaccharide biosynthesis glycosyltransferase capM chr5 10585028-10583568 H EGN_Mt100125 20111014	GO:0001666|response to hypoxia GO:0009058|biosynthetic process GO:0019375|galactolipid biosynthetic process	GO:0016757|transferase activity, transferring glycosyl groups	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00088	A	A1S	Potri.001G128400	Potri.001G128400(AS)	POPTR_0001s01060	sp|Q9C9H7|RLP12_ARATH	Receptor-like protein 12 OS=Arabidopsis thaliana GN=RLP12 PE=2 SV=2	AT1G45616.1	| Symbols: AtRLP6, RLP6 | receptor like protein 6 | chr1:17183550-17186534 REVERSE LENGTH=994	LOC_Os04g40440.1	protein|expressed protein	IMGA|Medtr5g046350.1	Receptor-like protein kinase chr5 19911154-19914497 H EGN_Mt100125 20111014	GO:0002237|response to molecule of bacterial origin GO:0006952|defense response GO:0007165|signal transduction GO:0010103|stomatal complex morphogenesis GO:0048443|stamen development	NA	GO:0016020|membrane
pt2_00089	A	A1S	Potri.001G128500	Potri.001G128500(AS)	POPTR_0001s01070	sp|Q8GXZ3|Y5102_ARATH	Serine/threonine-protein kinase At5g01020 OS=Arabidopsis thaliana GN=At5g01020 PE=1 SV=1	AT1G61590.1	| Symbols: | Protein kinase superfamily protein | chr1:22723691-22726022 REVERSE LENGTH=424	LOC_Os03g24930.1	protein|tyrosine protein kinase domain containing protein, putative, expressed	IMGA|Medtr5g026370.1	Protein kinase 2B chr5 10589195-10586952 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	NA
pt2_00090	A	A1S	Potri.001G128600	Potri.001G128600(AS)	POPTR_0001s01080	NA	NA	AT1G31460.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23270.1); Has 1251 Blast hits to 756 proteins in 185 species: Archae - 0; Bacteria - 295; Metazoa - 374; Fungi - 176; Plants - 58; Viruses - 17; Other Eukaryotes - 331 (source: NCBI BLink). | chr1:11261705-11262610 REVERSE LENGTH=301	NA	NA	IMGA|Medtr5g026390.1	hypothetical protein chr5 10595425-10596544 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_00091	A	A1S	Potri.001G128700	Potri.001G128700(AS)	POPTR_0001s01090	sp|Q9ZPR1|CD48B_ARATH	Cell division control protein 48 homolog B OS=Arabidopsis thaliana GN=CDC48B PE=2 SV=1	AT2G03670.1	| Symbols: CDC48B | cell division cycle 48B | chr2:1117595-1120361 FORWARD LENGTH=603	LOC_Os04g42110.1	protein|cell division control protein 48 homolog B, putative, expressed	IMGA|Medtr1g083330.1	26S protease regulatory subunit 6A-like protein chr1 21592984-21597408 F EGN_Mt100125 20111014	GO:0009560|embryo sac egg cell differentiation	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity	GO:0005886|plasma membrane
pt2_00092	A	A1S	Potri.001G128800	Potri.001G128800(AS)	POPTR_0001s01100	NA	NA	AT4G34660.1	| Symbols: | SH3 domain-containing protein | chr4:16545595-16548294 REVERSE LENGTH=368	LOC_Os03g16000.1	protein|src homology-3 domain protein 3, putative, expressed	IMGA|Medtr5g026400.1	Rho guanine nucleotide exchange factor chr5 10603873-10598440 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0030276|clathrin binding	GO:0005829|cytosol
pt2_00093	A	A1S	Potri.001G128900	Potri.001G128900(AS)	POPTR_0001s01110	NA	NA	AT1G31410.1	| Symbols: | putrescine-binding periplasmic protein-related | chr1:11247094-11249345 REVERSE LENGTH=524	LOC_Os04g51310.1	protein|putrescine-binding periplasmic protein-related, putative, expressed	NA	NA	GO:0006810|transport	GO:0005215|transporter activity	GO:0005634|nucleus GO:0009941|chloroplast envelope
pt2_00094	A	A1S	Potri.001G129000	Potri.001G129000(AS)	POPTR_0001s01120	sp|C0LGF4|FEI1_ARATH	LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1	AT1G31420.2	| Symbols: FEI1 | Leucine-rich repeat protein kinase family protein | chr1:11250360-11253516 FORWARD LENGTH=591	LOC_Os03g16010.1	protein|BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	IMGA|Medtr5g026510.1	LRR receptor-like serine/threonine-protein kinase FEI chr5 10652878-10642878 E EGN_Mt100125 20111014	GO:0000271|polysaccharide biosynthetic process GO:0000272|polysaccharide catabolic process GO:0005982|starch metabolic process GO:0006468|protein phosphorylation GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway GO:0009664|plant-type cell wall organization GO:0009825|multidimensional cell growth GO:0009826|unidimensional cell growth GO:0009932|cell tip growth GO:0010817|regulation of hormone levels GO:0016049|cell growth GO:0019761|glucosinolate biosynthetic process GO:0030243|cellulose metabolic process GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0046777|protein autophosphorylation GO:0048767|root hair elongation GO:0071555|cell wall organization	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_00095	C	C1S	Potri.001G129000	Potri.001G129000(CS)	sp|C0LGF4|FEI1_ARATH	LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1	AT1G31420.2	| Symbols: FEI1 | Leucine-rich repeat protein kinase family protein | chr1:11250360-11253516 FORWARD LENGTH=591	LOC_Os03g16010.1	protein|BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	IMGA|Medtr5g026510.1	LRR receptor-like serine/threonine-protein kinase FEI chr5 10652878-10642878 E EGN_Mt100125 20111014	GO:0000271|polysaccharide biosynthetic process GO:0000272|polysaccharide catabolic process GO:0005982|starch metabolic process GO:0006468|protein phosphorylation GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway GO:0009664|plant-type cell wall organization GO:0009825|multidimensional cell growth GO:0009826|unidimensional cell growth GO:0009932|cell tip growth GO:0010817|regulation of hormone levels GO:0016049|cell growth GO:0019761|glucosinolate biosynthetic process GO:0030243|cellulose metabolic process GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0046777|protein autophosphorylation GO:0048767|root hair elongation GO:0071555|cell wall organization	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_00096	A	A1S	Potri.001G129100	Potri.001G129100(AS)	POPTR_0001s01130	sp|P41091|IF2G_HUMAN	Eukaryotic translation initiation factor 2 subunit 3 OS=Homo sapiens GN=EIF2S3 PE=1 SV=3	AT1G04170.1	| Symbols: EIF2 GAMMA | eukaryotic translation initiation factor 2 gamma subunit | chr1:1097423-1099702 FORWARD LENGTH=465	LOC_Os12g41400.1	protein|eukaryotic translation initiation factor 2 subunit gamma, putative, expressed	NA	NA	GO:0009220|pyrimidine ribonucleotide biosynthetic process	GO:0003743|translation initiation factor activity GO:0003924|GTPase activity GO:0005525|GTP binding GO:0008135|translation factor activity, nucleic acid binding	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_00097	A	A1S	Potri.001G129200	Potri.001G129200(AS)	POPTR_0001s01140	sp|Q9SFC7|FB135_ARATH	F-box protein At3g07870 OS=Arabidopsis thaliana GN=At3g07870 PE=2 SV=1	AT3G07870.1	| Symbols: | F-box and associated interaction domains-containing protein | chr3:2510871-2512124 FORWARD LENGTH=417	NA	NA	IMGA|Medtr5g027370.1	F-box family protein chr5 11126676-11125166 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_00098	A	A1S	Potri.001G129300	Potri.001G129300(AS)	POPTR_0001s01150	NA	NA	AT4G28050.1	| Symbols: TET7 | tetraspanin7 | chr4:13942566-13943621 REVERSE LENGTH=263	LOC_Os08g34460.1	protein|tetraspanin family protein, putative, expressed	IMGA|Medtr5g030070.1	hypothetical protein chr5 12391997-12393827 F EGN_Mt100125 20111014	GO:0007020|microtubule nucleation GO:0007568|aging	GO:0003674|molecular_function	GO:0005576|extracellular region GO:0009506|plasmodesma GO:0016021|integral to membrane
pt2_00099	A	A1S	Potri.001G129400	Potri.001G129400(AS)	POPTR_0001s01160	sp|Q9SU30|CPR30_ARATH	F-box protein CPR30 OS=Arabidopsis thaliana GN=CPR30 PE=1 SV=2	AT4G12560.2	| Symbols: CPR30 | F-box and associated interaction domains-containing protein | chr4:7441815-7443157 FORWARD LENGTH=413	LOC_Os01g24810.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g027370.1	F-box family protein chr5 11126676-11125166 E EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	NA
pt2_00100	A	A1S	Potri.001G129500	Potri.001G129500(AS)	POPTR_0001s01165	NA	NA	NA	NA	LOC_Os02g39580.1	protein|ZOS2-12 - C2H2 zinc finger protein, expressed	IMGA|Medtr5g026530.1	Zinc finger protein chr5 10658596-10662318 F EGN_Mt100125 20111014	NA	NA	NA
pt2_00101	A	A1S	Potri.001G129600	Potri.001G129600(AS)	POPTR_0001s01170	sp|Q9F234|AGL2_BACTQ	Alpha-glucosidase 2 OS=Bacillus thermoamyloliquefaciens PE=3 SV=1	AT3G23640.2	| Symbols: HGL1 | heteroglycan glucosidase 1 | chr3:8502355-8509358 FORWARD LENGTH=991	LOC_Os07g23880.1	protein|glycosyl hydrolase, family 31, putative, expressed	IMGA|Medtr5g026610.1	Alpha glucosidase-like protein chr5 10709549-10721864 E EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0005634|nucleus GO:0009507|chloroplast
pt2_00102	A	A1S	Potri.001G129700	Potri.001G129700(AS)	POPTR_0001s01180	sp|Q9C801|MOS2_ARATH	Protein MOS2 OS=Arabidopsis thaliana GN=MOS2 PE=2 SV=1	AT1G33520.1	| Symbols: MOS2 | D111/G-patch domain-containing protein | chr1:12157488-12158876 REVERSE LENGTH=462	LOC_Os03g14860.1	protein|G-patch domain containing protein, expressed	NA	NA	GO:0009870|defense response signaling pathway, resistance gene-dependent GO:0042742|defense response to bacterium	GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005634|nucleus
pt2_00103	A	A1S	Potri.001G129800	Potri.001G129800(AS)	POPTR_0001s01190	NA	NA	AT5G07840.1	| Symbols: | Ankyrin repeat family protein | chr5:2506764-2507291 REVERSE LENGTH=175	LOC_Os02g01245.1	protein|expressed protein	IMGA|Medtr5g026550.1	Ankyrin repeat domain-containing protein chr5 10672257-10674639 F EGN_Mt100125 20111014	GO:0009553|embryo sac development GO:0009567|double fertilization forming a zygote and endosperm GO:0080173|male-female gamete recognition during double fertilization	NA	GO:0005634|nucleus GO:0005739|mitochondrion
pt2_00104	A	A1S	Potri.001G129900	Potri.001G129900(AS)	POPTR_0001s01210	sp|O80450|TGT3B_ARATH	Trihelix transcription factor GT-3b OS=Arabidopsis thaliana GN=GT-3B PE=1 SV=1	AT2G38250.1	| Symbols: | Homeodomain-like superfamily protein | chr2:16018384-16019500 FORWARD LENGTH=289	LOC_Os04g51320.1	protein|transcription factor TF2, putative, expressed	IMGA|Medtr5g026540.1	Zinc finger and SCAN domain-containing protein chr5 10669389-10667294 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0010200|response to chitin	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus GO:0005730|nucleolus GO:0016592|mediator complex
pt2_00105	A	A1S	Potri.001G130100	Potri.001G130100(AS)	POPTR_0001s01220	NA	NA	AT3G45900.1	| Symbols: | Ribonuclease P protein subunit P38-related | chr3:16874566-16875984 REVERSE LENGTH=389	LOC_Os03g63660.1	protein|expressed protein	IMGA|Medtr5g026680.1	hypothetical protein chr5 10775154-10778700 E EGN_Mt100125 20111014	GO:0008150|biological_process GO:0015996|chlorophyll catabolic process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00106	A	A1S	Potri.001G130100	Potri.001G130100(AS)	POPTR_0001s01220	NA	NA	AT3G45900.1	| Symbols: | Ribonuclease P protein subunit P38-related | chr3:16874566-16875984 REVERSE LENGTH=389	LOC_Os03g63660.1	protein|expressed protein	IMGA|Medtr5g026680.1	hypothetical protein chr5 10775154-10778700 E EGN_Mt100125 20111014	GO:0008150|biological_process GO:0015996|chlorophyll catabolic process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00107	A	A1S	Potri.001G130100	Potri.001G130100(AS)	POPTR_0001s01220	NA	NA	AT3G45900.1	| Symbols: | Ribonuclease P protein subunit P38-related | chr3:16874566-16875984 REVERSE LENGTH=389	LOC_Os03g63660.1	protein|expressed protein	IMGA|Medtr5g026680.1	hypothetical protein chr5 10775154-10778700 E EGN_Mt100125 20111014	GO:0008150|biological_process GO:0015996|chlorophyll catabolic process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00108	A	A2S	Potri.001G130200	Potri.001G130200(AS) Potri.003G103700(BS)	POPTR_0001s01230	sp|O04066|ACBP_RICCO	Acyl-CoA-binding protein OS=Ricinus communis PE=3 SV=1	AT1G31812.1	| Symbols: ACBP6, ACBP | acyl-CoA-binding protein 6 | chr1:11411132-11412099 REVERSE LENGTH=92	LOC_Os08g06550.1	protein|acyl CoA binding protein, putative, expressed	IMGA|Medtr5g026740.1	Acyl-CoA-binding protein chr5 10795231-10792987 F EGN_Mt100125 20111014	GO:0006816|calcium ion transport GO:0006869|lipid transport GO:0007030|Golgi organization GO:0009409|response to cold GO:0009646|response to absence of light GO:0009651|response to salt stress GO:0010264|myo-inositol hexakisphosphate biosynthetic process GO:0019344|cysteine biosynthetic process GO:0050826|response to freezing	GO:0000062|fatty-acyl-CoA binding GO:0031210|phosphatidylcholine binding	GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane
pt2_00109	A	A5S	Potri.011G084800	Potri.011G084800(AS) Potri.001G130300(AS) Potri.013G043800(BS) Potri.004G071500(BS) Potri.016G093900(BS)	POPTR_0001s01240	NA	NA	NA	NA	NA	NA	NA	NA	GO:0000165|MAPK cascade GO:0006995|cellular response to nitrogen starvation GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process GO:0009814|defense response, incompatible interaction GO:0009816|defense response to bacterium, incompatible interaction GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0010310|regulation of hydrogen peroxide metabolic process GO:0031347|regulation of defense response GO:0031348|negative regulation of defense response GO:0042742|defense response to bacterium GO:0045088|regulation of innate immune response GO:0050832|defense response to fungus GO:0071482|cellular response to light stimulus	GO:0005515|protein binding	GO:0005634|nucleus GO:0009507|chloroplast
pt2_00110	A	A1S	Potri.001G130400	Potri.001G130400(AS)	POPTR_0001s01250	sp|Q9M2C8|PP291_ARATH	Pentatricopeptide repeat-containing protein At3g61360 OS=Arabidopsis thaliana GN=At3g61360 PE=2 SV=1	AT3G61360.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:22704630-22706126 REVERSE LENGTH=498	LOC_Os06g47950.1	protein|tetratricopeptide-like helical, putative, expressed	IMGA|Medtr1g108270.1	Pentatricopeptide repeat-containing protein chr1 31811104-31809581 H EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005739|mitochondrion
pt2_00111	B	B1S	Potri.001G130400	Potri.001G130400(BS)	POPTR_0001s01260	sp|Q9M2C8|PP291_ARATH	Pentatricopeptide repeat-containing protein At3g61360 OS=Arabidopsis thaliana GN=At3g61360 PE=2 SV=1	AT3G61360.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:22704630-22706126 REVERSE LENGTH=498	LOC_Os06g47950.1	protein|tetratricopeptide-like helical, putative, expressed	IMGA|Medtr1g108270.1	Pentatricopeptide repeat-containing protein chr1 31811104-31809581 H EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005739|mitochondrion
pt2_00112	A	A1S	Potri.001G130500	Potri.001G130500(AS)	POPTR_0001s01270	sp|Q12955|ANK3_HUMAN	Ankyrin-3 OS=Homo sapiens GN=ANK3 PE=1 SV=3	AT4G19150.1	| Symbols: | Ankyrin repeat family protein | chr4:10471578-10472677 REVERSE LENGTH=243	LOC_Os10g43040.1	protein|ankyrin repeat domain-containing protein 28, putative, expressed	IMGA|Medtr5g026800.1	Ankyrin repeat domain-containing protein chr5 10816790-10819302 F EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005737|cytoplasm
pt2_00113	A	A2S	Potri.001G130600	Potri.001G130600(AS) Potri.003G103300(DS)	POPTR_0001s01280	sp|Q94B60|CLPP4_ARATH	ATP-dependent Clp protease proteolytic subunit 4, chloroplastic OS=Arabidopsis thaliana GN=CLPP4 PE=1 SV=1	AT5G45390.1	| Symbols: CLPP4, NCLPP4 | CLP protease P4 | chr5:18396351-18397586 FORWARD LENGTH=292	LOC_Os10g43050.1	protein|OsClp11 - Putative Clp protease homologue, expressed	IMGA|Medtr5g026840.1	ATP-dependent Clp protease proteolytic subunit chr5 10835719-10840526 F EGN_Mt100125 20111014	GO:0006364|rRNA processing GO:0006508|proteolysis GO:0009658|chloroplast organization GO:0009902|chloroplast relocation GO:0010027|thylakoid membrane organization GO:0010207|photosystem II assembly GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0034660|ncRNA metabolic process GO:0035304|regulation of protein dephosphorylation GO:0042793|transcription from plastid promoter GO:0045893|positive regulation of transcription, DNA-dependent GO:0048510|regulation of timing of transition from vegetative to reproductive phase	GO:0004252|serine-type endopeptidase activity	GO:0009507|chloroplast GO:0009532|plastid stroma GO:0009535|chloroplast thylakoid membrane GO:0009570|chloroplast stroma GO:0009579|thylakoid GO:0009840|chloroplastic endopeptidase Clp complex GO:0009941|chloroplast envelope
pt2_00114	G	G1	NA	NA	POPTR_0001s01290	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00115	A	A1S	Potri.001G130700	Potri.001G130700(AS)	POPTR_0001s01300	sp|Q9FPT1|UBP12_ARATH	Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana GN=UBP12 PE=1 SV=2	AT3G17380.1	| Symbols: | TRAF-like family protein | chr3:5950240-5952124 FORWARD LENGTH=309	LOC_Os01g56490.1	protein|ubiquitin carboxyl-terminal hydrolase, putative, expressed	IMGA|Medtr5g086700.1	Ubiquitin carboxyl-terminal hydrolase chr5 36467904-36445584 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00116	B	B1S	Potri.001G130800	Potri.001G130800(BS)	POPTR_0001s01310	NA	NA	NA	NA	LOC_Os06g02520.1	protein|interacting protein of DMI3, putative, expressed	IMGA|Medtr5g026850.1	CYCLOPS chr5 10846747-10850578 F EGN_Mt100125 20111014	NA	NA	NA
pt2_00117	A	A1S	Potri.001G130900	Potri.001G130900(AS)	POPTR_0001s01320	NA	NA	AT4G19140.1	| Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:10469830-10471275 FORWARD LENGTH=303	LOC_Os04g51166.1	protein|expressed protein	IMGA|Medtr5g026860.1	hypothetical protein chr5 10858303-10851763 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_00118	C	C1S	Potri.001G131000	Potri.001G131000(CS)	sp|P41127|RL131_ARATH	60S ribosomal protein L13-1 OS=Arabidopsis thaliana GN=RPL13B PE=1 SV=1	AT3G49010.3	| Symbols: ATBBC1, BBC1, RSU2 | breast basic conserved 1 | chr3:18166971-18168047 REVERSE LENGTH=206	LOC_Os06g02510.2	protein|ribosomal protein L13, putative, expressed	IMGA|Medtr5g026750.1	60S ribosomal protein L13 chr5 10799760-10796813 E EGN_Mt100125 20111014	GO:0001510|RNA methylation GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005618|cell wall GO:0005622|intracellular GO:0005730|nucleolus GO:0005737|cytoplasm GO:0005774|vacuolar membrane GO:0005829|cytosol GO:0005840|ribosome GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane GO:0022625|cytosolic large ribosomal subunit GO:0022626|cytosolic ribosome
pt2_00119	A	A3S	Potri.001G131000	Potri.001G131000(AS) Potri.016G082300(DS) Potri.013G027600(DS)	POPTR_0001s01350	sp|P41127|RL131_ARATH	60S ribosomal protein L13-1 OS=Arabidopsis thaliana GN=RPL13B PE=1 SV=1	AT3G49010.3	| Symbols: ATBBC1, BBC1, RSU2 | breast basic conserved 1 | chr3:18166971-18168047 REVERSE LENGTH=206	LOC_Os06g02510.2	protein|ribosomal protein L13, putative, expressed	IMGA|Medtr5g026750.1	60S ribosomal protein L13 chr5 10799760-10796813 E EGN_Mt100125 20111014	GO:0001510|RNA methylation GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005618|cell wall GO:0005622|intracellular GO:0005730|nucleolus GO:0005737|cytoplasm GO:0005774|vacuolar membrane GO:0005829|cytosol GO:0005840|ribosome GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane GO:0022625|cytosolic large ribosomal subunit GO:0022626|cytosolic ribosome
pt2_00120	A	A2S	Potri.001G131100	Potri.001G131100(AS) Potri.003G102700(BS)	POPTR_0001s01360	sp|Q6NY74|RFA1_DANRE	Replication protein A 70 kDa DNA-binding subunit OS=Danio rerio GN=rpa1 PE=1 SV=1	AT2G06510.2	| Symbols: ATRPA1A, RPA1A, RPA70A, ATRPA70A | replication protein A 1A | chr2:2585215-2587601 FORWARD LENGTH=617	LOC_Os02g53680.1	protein|RPA1A - Putative single-stranded DNA binding complex subunit 1, expressed	IMGA|Medtr5g026890.1	Replication protein A 70 kDa DNA-binding subunit chr5 10868938-10877058 E EGN_Mt100125 20111014	GO:0006260|DNA replication GO:0006302|double-strand break repair GO:0010332|response to gamma radiation	GO:0003676|nucleic acid binding GO:0003677|DNA binding GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_00121	A	A1S	Potri.001G131300	Potri.001G131300(AS)	POPTR_0001s01370	NA	NA	AT5G45410.3	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G25030.2); Has 124 Blast hits to 124 proteins in 34 species: Archae - 2; Bacteria - 31; Metazoa - 0; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:18402071-18403282 REVERSE LENGTH=342	LOC_Os10g43060.1	protein|expressed protein	IMGA|Medtr5g026910.1	hypothetical protein chr5 10886125-10888055 H EGN_Mt100125 20111014	GO:0006612|protein targeting to membrane GO:0006944|cellular membrane fusion GO:0007165|signal transduction GO:0008150|biological_process GO:0009414|response to water deprivation GO:0009611|response to wounding GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009753|response to jasmonic acid stimulus GO:0009805|coumarin biosynthetic process GO:0010363|regulation of plant-type hypersensitive response GO:0030968|endoplasmic reticulum unfolded protein response GO:0035556|intracellular signal transduction GO:0042538|hyperosmotic salinity response GO:0043069|negative regulation of programmed cell death	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00122	A	A1S	Potri.001G131400	Potri.001G131400(AS)	POPTR_0001s01380	sp|Q9C6S7|PMTK_ARATH	Probable methyltransferase PMT20 OS=Arabidopsis thaliana GN=At1g31850 PE=1 SV=1	AT1G31850.2	| Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr1:11431165-11433443 FORWARD LENGTH=603	LOC_Os04g48230.2	protein|dehydration response related protein, putative, expressed	IMGA|Medtr5g026930.1	hypothetical protein chr5 10903456-10906651 F EGN_Mt100125 20111014	GO:0009269|response to desiccation GO:0009409|response to cold GO:0009651|response to salt stress GO:0009737|response to abscisic acid stimulus	GO:0008168|methyltransferase activity	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_00123	A	A1S	Potri.001G131400	Potri.001G131400(AS)	POPTR_0001s01380	sp|Q9C6S7|PMTK_ARATH	Probable methyltransferase PMT20 OS=Arabidopsis thaliana GN=At1g31850 PE=1 SV=1	AT1G31850.2	| Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr1:11431165-11433443 FORWARD LENGTH=603	LOC_Os04g48230.2	protein|dehydration response related protein, putative, expressed	IMGA|Medtr5g026930.1	hypothetical protein chr5 10903456-10906651 F EGN_Mt100125 20111014	GO:0009269|response to desiccation GO:0009409|response to cold GO:0009651|response to salt stress GO:0009737|response to abscisic acid stimulus	GO:0008168|methyltransferase activity	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_00124	A	A1S	Potri.001G131500	Potri.001G131500(AS)	POPTR_0001s01390	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00125	A	A1S	Potri.001G131500	Potri.001G131500(AS)	POPTR_0001s01390	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00126	A	A1S	Potri.001G131500	Potri.001G131500(AS)	POPTR_0001s01390	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00127	A	A1S	Potri.001G131600	Potri.001G131600(AS)	POPTR_0001s01400	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00128	A	A1S	Potri.001G131600	Potri.001G131600(AS)	POPTR_0001s01400	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00129	A	A1S	Potri.001G131800	Potri.001G131800(AS)	POPTR_0001s01410	sp|Q17TI5|BRX_ARATH	Protein BREVIS RADIX OS=Arabidopsis thaliana GN=BRX PE=1 SV=2	AT1G31880.1	| Symbols: NLM9, BRX | DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein | chr1:11447804-11450053 FORWARD LENGTH=344	LOC_Os08g36020.1	protein|Disease resistance/zinc finger/chromosome condensation-like region protein, putative, expressed	IMGA|Medtr5g026970.1	Protein BREVIS RADIX chr5 10930283-10925938 H EGN_Mt100125 20111014	GO:0009734|auxin mediated signaling pathway GO:0009736|cytokinin mediated signaling pathway GO:0009737|response to abscisic acid stimulus GO:0048364|root development GO:0048527|lateral root development	GO:0015250|water channel activity GO:0042802|identical protein binding	GO:0005634|nucleus
pt2_00130	A	A1S	Potri.001G132000	Potri.001G132000(AS)	POPTR_0001s01420	sp|O49668|PAM68_ARATH	Protein PAM68, chloroplastic OS=Arabidopsis thaliana GN=PAM68 PE=1 SV=1	AT4G19100.1	| Symbols: PAM68 | Protein of unknown function (DUF3464) | chr4:10453453-10454359 FORWARD LENGTH=214	LOC_Os06g21530.1	protein|expressed protein	IMGA|Medtr5g027010.1	hypothetical protein chr5 10943818-10942971 E EGN_Mt100125 20111014	GO:0008150|biological_process GO:0010207|photosystem II assembly GO:0015979|photosynthesis GO:0016556|mRNA modification	GO:0003674|molecular_function	GO:0005634|nucleus GO:0009507|chloroplast GO:0016020|membrane
pt2_00131	A	A1S	Potri.001G132100	Potri.001G132100(AS)	POPTR_0001s01430	NA	NA	AT3G01430.1	| Symbols: | BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT5G14890.1); Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:165595-166137 REVERSE LENGTH=180	LOC_Os02g50940.1	protein|NHL repeat-containing protein, putative, expressed	IMGA|AC233671_8.1	Potassium transporter AC233671.1 28492-41898 I EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00132	A	A2S	Potri.T172200	Potri.T172200(AS) Potri.001G132200(AS)	POPTR_0001s01440	NA	NA	NA	NA	LOC_Os08g08230.1	protein|kinesin-like protein, identical, putative, expressed	IMGA|Medtr5g026790.1	hypothetical protein chr5 10811564-10813909 F EGN_Mt100125 20111014	NA	NA	NA
pt2_00133	A	A1S	Potri.001G132300	Potri.001G132300(AS)	POPTR_0001s01450	sp|Q39255|SKP1A_ARATH	SKP1-like protein 1A OS=Arabidopsis thaliana GN=SKP1A PE=1 SV=1	AT1G75950.1	| Symbols: SKP1, ASK1, ATSKP1, SKP1A, UIP1 | S phase kinase-associated protein 1 | chr1:28516715-28517454 FORWARD LENGTH=160	LOC_Os09g36830.1	protein|Skp1 family, dimerisation domain containing protein, expressed	IMGA|Medtr5g022730.1	SKP1-like protein chr5 8734075-8735890 F EGN_Mt100125 20111014	GO:0000226|microtubule cytoskeleton organization GO:0006511|ubiquitin-dependent protein catabolic process GO:0007067|mitosis GO:0007140|male meiosis GO:0042023|DNA endoreduplication GO:0042752|regulation of circadian rhythm GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0043248|proteasome assembly GO:0045910|negative regulation of DNA recombination GO:0046686|response to cadmium ion GO:0051510|regulation of unidimensional cell growth GO:0051788|response to misfolded protein	GO:0004842|ubiquitin-protein ligase activity GO:0005515|protein binding	GO:0000151|ubiquitin ligase complex GO:0005634|nucleus GO:0005737|cytoplasm GO:0005819|spindle GO:0005829|cytosol GO:0005886|plasma membrane GO:0009524|phragmoplast GO:0019005|SCF ubiquitin ligase complex
pt2_00134	A	A1S	Potri.001G132400	Potri.001G132400(AS)	POPTR_0001s01460	sp|P42735|CDI8_ARATH	Cadmium-induced protein AS8 OS=Arabidopsis thaliana GN=At4g19070 PE=2 SV=1	AT4G19070.1	| Symbols: | Putative membrane lipoprotein | chr4:10446770-10448079 REVERSE LENGTH=171	LOC_Os07g05040.1	protein|cadmium-induced protein, putative, expressed	IMGA|contig_49646_2.1	Cadmium-induced protein AS8 contig_49646 3909-1914 F PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_00135	A	A1S	Potri.001G132500	Potri.001G132500(AS)	POPTR_0001s01470	sp|Q5ZIN1|NUDC_CHICK	Nuclear migration protein nudC OS=Gallus gallus GN=NUDC PE=2 SV=1	AT5G53400.1	| Symbols: BOB1 | HSP20-like chaperones superfamily protein | chr5:21661588-21663383 FORWARD LENGTH=304	LOC_Os06g12530.1	protein|CS domain containing protein, putative, expressed	IMGA|Medtr1g008170.1	Nuclear migration protein nudC chr1 1342714-1339933 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005737|cytoplasm
pt2_00136	A	A1S	Potri.001G132600	Potri.001G132600(AS)	POPTR_0001s01480	NA	NA	AT4G37740.1	| Symbols: AtGRF2, GRF2 | growth-regulating factor 2 | chr4:17725533-17727609 REVERSE LENGTH=535	LOC_Os02g47280.2	protein|growth-regulating factor, putative, expressed	IMGA|Medtr5g027030.1	hypothetical protein chr5 10949245-10952049 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009737|response to abscisic acid stimulus GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009965|leaf morphogenesis GO:0010162|seed dormancy process GO:0048366|leaf development	GO:0005524|ATP binding GO:0016818|hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	GO:0005634|nucleus
pt2_00137	A	A1S	Potri.001G132700	Potri.001G132700(AS)	POPTR_0001s01490	sp|Q8GYX0|MOB1_ARATH	MOB kinase activator-like 1 OS=Arabidopsis thaliana GN=At4g19045 PE=2 SV=1	AT4G19045.1	| Symbols: | Mob1/phocein family protein | chr4:10438213-10439788 REVERSE LENGTH=215	LOC_Os03g38020.1	protein|mps one binder kinase activator-like 1A, putative, expressed	IMGA|Medtr5g027160.1	Mps one binder kinase activator-like 1A chr5 11008648-11014415 F EGN_Mt100125 20111014	NA	NA	GO:0009507|chloroplast
pt2_00138	A	A1S	Potri.001G132700	Potri.001G132700(AS)	POPTR_0001s01490	sp|Q8GYX0|MOB1_ARATH	MOB kinase activator-like 1 OS=Arabidopsis thaliana GN=At4g19045 PE=2 SV=1	AT4G19045.1	| Symbols: | Mob1/phocein family protein | chr4:10438213-10439788 REVERSE LENGTH=215	LOC_Os03g38020.1	protein|mps one binder kinase activator-like 1A, putative, expressed	IMGA|Medtr5g027160.1	Mps one binder kinase activator-like 1A chr5 11008648-11014415 F EGN_Mt100125 20111014	NA	NA	GO:0009507|chloroplast
pt2_00139	A	A1S	Potri.001G132700	Potri.001G132700(AS)	POPTR_0001s01490	sp|Q8GYX0|MOB1_ARATH	MOB kinase activator-like 1 OS=Arabidopsis thaliana GN=At4g19045 PE=2 SV=1	AT4G19045.1	| Symbols: | Mob1/phocein family protein | chr4:10438213-10439788 REVERSE LENGTH=215	LOC_Os03g38020.1	protein|mps one binder kinase activator-like 1A, putative, expressed	IMGA|Medtr5g027160.1	Mps one binder kinase activator-like 1A chr5 11008648-11014415 F EGN_Mt100125 20111014	NA	NA	GO:0009507|chloroplast
pt2_00140	A	A1S	Potri.001G132800	Potri.001G132800(AS)	POPTR_0001s01500	NA	NA	AT1G32120.1	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Aminotransferase-like, plant mobile domain (InterPro:IPR019557), Protein of unknown function DUF716 (InterPro:IPR006904); BEST Arabidopsis thaliana protein match is: Aminotransferase-like, plant mobile domain family protein (TAIR:AT1G51538.1); Has 16736 Blast hits to 9656 proteins in 576 species: Archae - 4; Bacteria - 1182; Metazoa - 7098; Fungi - 2631; Plants - 1178; Viruses - 174; Other Eukaryotes - 4469 (source: NCBI BLink). | chr1:11552926-11558608 FORWARD LENGTH=1206	LOC_Os11g40570.2	protein|plant viral response family protein, putative, expressed	IMGA|Medtr5g027180.1	Transmembrane protein 45B chr5 11024450-11020755 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0016020|membrane
pt2_00141	A	A1S	Potri.001G132900	Potri.001G132900(AS)	POPTR_0001s01510	NA	NA	AT4G19040.1	| Symbols: EDR2 | ENHANCED DISEASE RESISTANCE 2 | chr4:10431799-10437171 REVERSE LENGTH=718	LOC_Os10g31770.1	protein|START domain containing protein, expressed	IMGA|Medtr5g027200.1	Kinase-START chr5 11031013-11044252 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0005543|phospholipid binding GO:0008289|lipid binding	GO:0005739|mitochondrion GO:0005886|plasma membrane
pt2_00142	A	A1S	Potri.001G133000	Potri.001G133000(AS)	POPTR_0001s01520	sp|Q7Y232|U73B4_ARATH	UDP-glycosyltransferase 73B4 OS=Arabidopsis thaliana GN=UGT73B4 PE=2 SV=1	AT2G15490.1	| Symbols: UGT73B4 | UDP-glycosyltransferase 73B4 | chr2:6761750-6763398 FORWARD LENGTH=484	LOC_Os01g08100.1	 protein|flavonol-3-O-glycoside-7-O-glucosyltransferase 1, putative, expressed	IMGA|Medtr5g027210.1	Cis-zeatin O-glucosyltransferase chr5 11046271-11044811 H EGN_Mt100125 20111014	GO:0008152|metabolic process GO:0051555|flavonol biosynthetic process GO:0051707|response to other organism	GO:0008194|UDP-glycosyltransferase activity GO:0016758|transferase activity, transferring hexosyl groups GO:0035251|UDP-glucosyltransferase activity GO:0047893|flavonol 3-O-glucosyltransferase activity GO:0080044|quercetin 7-O-glucosyltransferase activity	NA
pt2_00143	B	B1S	Potri.001G133100	Potri.001G133100(BS)	POPTR_0001s01530	sp|Q9SCP5|U73C7_ARATH	UDP-glycosyltransferase 73C7 OS=Arabidopsis thaliana GN=UGT73C7 PE=2 SV=1	AT3G53160.1	| Symbols: UGT73C7 | UDP-glucosyl transferase 73C7 | chr3:19702485-19703957 REVERSE LENGTH=490	LOC_Os05g08510.1	protein|glucosyltransferase, putative	IMGA|Medtr5g027210.1	Cis-zeatin O-glucosyltransferase chr5 11046271-11044811 H EGN_Mt100125 20111014	GO:0008152|metabolic process	GO:0008194|UDP-glycosyltransferase activity GO:0015020|glucuronosyltransferase activity GO:0016758|transferase activity, transferring hexosyl groups	GO:0005575|cellular_component
pt2_00144	A	A1S	Potri.001G133200	Potri.001G133200(AS)	POPTR_0001s01540	sp|P52581|IFRH_LUPAL	Isoflavone reductase homolog OS=Lupinus albus PE=2 SV=1	AT1G32100.1	| Symbols: ATPRR1, PRR1 | pinoresinol reductase 1 | chr1:11546472-11547953 REVERSE LENGTH=317	LOC_Os12g16220.2	protein|nmrA-like family domain containing protein, expressed	IMGA|Medtr5g027240.1	Isoflavone reductase-like protein chr5 11063979-11060644 F EGN_Mt100125 20111014	GO:0009807|lignan biosynthetic process GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process	GO:0000166|nucleotide binding GO:0010283|pinoresinol reductase activity	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_00145	A	A2S	Potri.001G133300	Potri.001G133300(AS) Potri.003G100200(DS)	POPTR_0001s01550	sp|P52581|IFRH_LUPAL	Isoflavone reductase homolog OS=Lupinus albus PE=2 SV=1	AT1G32100.1	| Symbols: ATPRR1, PRR1 | pinoresinol reductase 1 | chr1:11546472-11547953 REVERSE LENGTH=317	LOC_Os12g16410.1	protein|isoflavone reductase, putative, expressed	IMGA|Medtr5g027240.1	Isoflavone reductase-like protein chr5 11063979-11060644 F EGN_Mt100125 20111014	GO:0009807|lignan biosynthetic process GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process	GO:0000166|nucleotide binding GO:0010283|pinoresinol reductase activity	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_00146	A	A1S	Potri.001G133400	Potri.001G133400(AS)	POPTR_0001s01560	sp|Q9SAK5|APL_ARATH	Myb family transcription factor APL OS=Arabidopsis thaliana GN=APL PE=2 SV=2	AT5G45580.1	| Symbols: | Homeodomain-like superfamily protein | chr5:18481092-18482598 REVERSE LENGTH=264	LOC_Os02g47190.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr5g027440.1	Myb family transcription factor-related protein chr5 11161185-11157775 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00147	A	A1S	Potri.001G133500	Potri.001G133500(AS)	POPTR_0001s01580	sp|Q8IUF1|CBWD2_HUMAN	COBW domain-containing protein 2 OS=Homo sapiens GN=CBWD2 PE=1 SV=1	AT1G80480.1	| Symbols: PTAC17 | plastid transcriptionally active 17 | chr1:30258272-30260570 REVERSE LENGTH=444	LOC_Os04g51100.1	protein|COBW domain containing protein, putative, expressed	IMGA|Medtr5g044050.1	COBW domain-containing protein chr5 18952585-18958233 E EGN_Mt100125 20111014	NA	NA	GO:0009295|nucleoid GO:0009507|chloroplast GO:0009508|plastid chromosome GO:0009570|chloroplast stroma
pt2_00148	A	A1S	Potri.001G133500	Potri.001G133500(AS)	POPTR_0001s01580	sp|Q8IUF1|CBWD2_HUMAN	COBW domain-containing protein 2 OS=Homo sapiens GN=CBWD2 PE=1 SV=1	AT1G80480.1	| Symbols: PTAC17 | plastid transcriptionally active 17 | chr1:30258272-30260570 REVERSE LENGTH=444	LOC_Os04g51100.1	protein|COBW domain containing protein, putative, expressed	IMGA|Medtr5g044050.1	COBW domain-containing protein chr5 18952585-18958233 E EGN_Mt100125 20111014	NA	NA	GO:0009295|nucleoid GO:0009507|chloroplast GO:0009508|plastid chromosome GO:0009570|chloroplast stroma
pt2_00149	A	A1S	Potri.001G133500	Potri.001G133500(AS)	POPTR_0001s01580	sp|Q8IUF1|CBWD2_HUMAN	COBW domain-containing protein 2 OS=Homo sapiens GN=CBWD2 PE=1 SV=1	AT1G80480.1	| Symbols: PTAC17 | plastid transcriptionally active 17 | chr1:30258272-30260570 REVERSE LENGTH=444	LOC_Os04g51100.1	protein|COBW domain containing protein, putative, expressed	IMGA|Medtr5g044050.1	COBW domain-containing protein chr5 18952585-18958233 E EGN_Mt100125 20111014	NA	NA	GO:0009295|nucleoid GO:0009507|chloroplast GO:0009508|plastid chromosome GO:0009570|chloroplast stroma
pt2_00150	A	A1S	Potri.001G133600	Potri.001G133600(AS)	POPTR_0001s01590	NA	NA	AT5G45590.1	| Symbols: | Ribosomal protein L35 | chr5:18484643-18486227 REVERSE LENGTH=173	LOC_Os10g42860.1	protein|ribosomal protein L35, putative, expressed	IMGA|Medtr5g027470.1	50S ribosomal protein L35 chr5 11186617-11190600 F EGN_Mt100125 20111014	GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005739|mitochondrion GO:0005840|ribosome
pt2_00151	D	D1S	Potri.001G133600	Potri.001G133600(DS)	POPTR_0001s01590	NA	NA	AT5G45590.1	| Symbols: | Ribosomal protein L35 | chr5:18484643-18486227 REVERSE LENGTH=173	LOC_Os10g42860.1	protein|ribosomal protein L35, putative, expressed	IMGA|Medtr5g027470.1	50S ribosomal protein L35 chr5 11186617-11190600 F EGN_Mt100125 20111014	GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005739|mitochondrion GO:0005840|ribosome
pt2_00152	A	A1S	Potri.001G133600	Potri.001G133600(AS)	POPTR_0001s01590	NA	NA	AT5G45590.1	| Symbols: | Ribosomal protein L35 | chr5:18484643-18486227 REVERSE LENGTH=173	LOC_Os10g42860.1	protein|ribosomal protein L35, putative, expressed	IMGA|Medtr5g027470.1	50S ribosomal protein L35 chr5 11186617-11190600 F EGN_Mt100125 20111014	GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005739|mitochondrion GO:0005840|ribosome
pt2_00153	A	A1S	Potri.001G133700	Potri.001G133700(AS)	POPTR_0001s01600	NA	NA	NA	NA	LOC_Os06g02370.1	protein|expressed protein	IMGA|Medtr5g027460.1	hypothetical protein chr5 11177545-11181738 E EGN_Mt100125 20111014	NA	NA	NA
pt2_00154	A	A1S	Potri.001G133800	Potri.001G133800(AS)	POPTR_0001s01610	sp|Q03516|RSN1_YEAST	Uncharacterized protein RSN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RSN1 PE=1 SV=1	AT1G32090.1	| Symbols: | early-responsive to dehydration stress protein (ERD4) | chr1:11540244-11544041 REVERSE LENGTH=806	LOC_Os10g42820.1	protein|early-responsive to dehydration protein-related, putative, expressed	IMGA|Medtr5g027510.1	"Membrane protein, putative" chr5 11212999-11207479 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0009507|chloroplast GO:0016020|membrane
pt2_00155	A	A1S	Potri.001G133900	Potri.001G133900(AS)	POPTR_0001s01620	sp|O82286|BPC7_ARATH	Protein BASIC PENTACYSTEINE7 OS=Arabidopsis thaliana GN=BPC7 PE=1 SV=1	AT2G35550.4	| Symbols: BPC7, BBR, ATBPC7 | basic pentacysteine 7 | chr2:14929938-14930618 FORWARD LENGTH=226	LOC_Os10g02584.3	protein|GAGA-binding protein, putative, expressed	NA	NA	GO:0000398|mRNA splicing, via spliceosome GO:0006355|regulation of transcription, DNA-dependent GO:0009410|response to xenobiotic stimulus GO:0009688|abscisic acid biosynthetic process GO:0030422|production of siRNA involved in RNA interference GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0043687|post-translational protein modification GO:0045893|positive regulation of transcription, DNA-dependent GO:0048522|positive regulation of cellular process	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00156	A	A1S	Potri.001G134000	Potri.001G134000(AS)	POPTR_0001s01630	sp|P26302|KPPR_WHEAT	Phosphoribulokinase, chloroplastic OS=Triticum aestivum PE=2 SV=1	AT1G32060.1	| Symbols: PRK | phosphoribulokinase | chr1:11532668-11534406 FORWARD LENGTH=395	LOC_Os02g47020.1	protein|phosphoribulokinase/Uridine kinase family protein, expressed	IMGA|Medtr5g027530.1	Phosphoribulokinase chr5 11227544-11224060 F EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0002831|regulation of response to biotic stimulus GO:0005975|carbohydrate metabolic process GO:0006098|pentose-phosphate shunt GO:0006364|rRNA processing GO:0006612|protein targeting to membrane GO:0008152|metabolic process GO:0009058|biosynthetic process GO:0009409|response to cold GO:0009595|detection of biotic stimulus GO:0009637|response to blue light GO:0009657|plastid organization GO:0009697|salicylic acid biosynthetic process GO:0009773|photosynthetic electron transport in photosystem I GO:0009814|defense response, incompatible interaction GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009902|chloroplast relocation GO:0010103|stomatal complex morphogenesis GO:0010114|response to red light GO:0010200|response to chitin GO:0010207|photosystem II assembly GO:0010218|response to far red light GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0015979|photosynthesis GO:0018119|peptidyl-cysteine S-nitrosylation GO:0019344|cysteine biosynthetic process GO:0019684|photosynthesis, light reaction GO:0031348|negative regulation of defense response GO:0035304|regulation of protein dephosphorylation GO:0042742|defense response to bacterium GO:0043900|regulation of multi-organism process GO:0050832|defense response to fungus	GO:0005515|protein binding GO:0005524|ATP binding GO:0008974|phosphoribulokinase activity GO:0016301|kinase activity	GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009570|chloroplast stroma GO:0009579|thylakoid GO:0009941|chloroplast envelope GO:0010319|stromule GO:0016020|membrane GO:0048046|apoplast
pt2_00157	A	A1S	Potri.001G134100	Potri.001G134100(AS)	POPTR_0001s01640	sp|Q9C6X2|SCAM4_ARATH	Secretory carrier-associated membrane protein 4 OS=Arabidopsis thaliana GN=SCAMP4 PE=2 SV=1	AT1G32050.1	| Symbols: | SCAMP family protein | chr1:11528616-11530974 FORWARD LENGTH=264	LOC_Os04g50890.1	protein|secretory carrier-associated membrane protein, putative, expressed	IMGA|Medtr5g027790.1	Secretory carrier-associated membrane protein chr5 11353024-11346920 E EGN_Mt100125 20111014	GO:0006944|cellular membrane fusion GO:0015031|protein transport GO:0016192|vesicle-mediated transport	GO:0022857|transmembrane transporter activity	GO:0005739|mitochondrion GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0016021|integral to membrane
pt2_00158	A	A2S	Potri.001G134200	Potri.001G134200(AS) Potri.001G134600(DS)	POPTR_0001s01650	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00159	A	A4S	Potri.T129700	Potri.T129700(AS) Potri.001G134300(AS) Potri.T129600(BS) Potri.001G134700(BS)	POPTR_0001s01660	sp|Q39214|RPM1_ARATH	Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1 PE=1 SV=1	AT3G07040.1	| Symbols: RPM1, RPS3 | NB-ARC domain-containing disease resistance protein | chr3:2226244-2229024 REVERSE LENGTH=926	LOC_Os08g32880.1	protein|disease resistance protein RPM1, putative, expressed	IMGA|Medtr5g027900.1	Disease resistance protein RPP8 chr5 11392567-11395939 H EGN_Mt100125 20111014	GO:0006952|defense response GO:0009626|plant-type hypersensitive response	GO:0000166|nucleotide binding GO:0005515|protein binding GO:0043531|ADP binding	GO:0005886|plasma membrane
pt2_00160	G	G1	NA	NA	POPTR_0001s01670	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00161	C	C1S	Potri.001G134600	Potri.001G134600(CS)	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006974|response to DNA damage stimulus GO:0007050|cell cycle arrest	GO:0046983|protein dimerization activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00162	A	A4S	Potri.T129600	Potri.T129600(AS) Potri.T129700(AS) Potri.001G134700(AS) Potri.001G134300(AS)	POPTR_0001s01700	sp|Q39214|RPM1_ARATH	Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1 PE=1 SV=1	AT3G07040.1	| Symbols: RPM1, RPS3 | NB-ARC domain-containing disease resistance protein | chr3:2226244-2229024 REVERSE LENGTH=926	LOC_Os08g32880.1	protein|disease resistance protein RPM1, putative, expressed	IMGA|Medtr5g027900.1	Disease resistance protein RPP8 chr5 11392567-11395939 H EGN_Mt100125 20111014	GO:0006952|defense response GO:0009626|plant-type hypersensitive response	GO:0000166|nucleotide binding GO:0005515|protein binding GO:0043531|ADP binding	GO:0005886|plasma membrane
pt2_00163	A	A2S	Potri.001G134800	Potri.001G134800(AS) Potri.T129500(AS)	POPTR_0001s01720	NA	NA	AT5G45610.1	| Symbols: SUV2 | protein dimerizations | chr5:18496397-18499673 REVERSE LENGTH=646	LOC_Os02g03590.1	protein|expressed protein	IMGA|Medtr5g027920.1	hypothetical protein chr5 11415894-11407915 E EGN_Mt100125 20111014	GO:0006974|response to DNA damage stimulus GO:0007050|cell cycle arrest	GO:0046983|protein dimerization activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00164	A	A2S	Potri.001G134800	Potri.001G134800(AS) Potri.T129500(AS)	POPTR_0001s01720	NA	NA	AT5G45610.1	| Symbols: SUV2 | protein dimerizations | chr5:18496397-18499673 REVERSE LENGTH=646	LOC_Os02g03590.1	protein|expressed protein	IMGA|Medtr5g027920.1	hypothetical protein chr5 11415894-11407915 E EGN_Mt100125 20111014	GO:0006974|response to DNA damage stimulus GO:0007050|cell cycle arrest	GO:0046983|protein dimerization activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00165	A	A1S	Potri.001G134800	Potri.001G134800(AS)	POPTR_0001s01720	NA	NA	AT5G45610.1	| Symbols: SUV2 | protein dimerizations | chr5:18496397-18499673 REVERSE LENGTH=646	LOC_Os02g03590.1	protein|expressed protein	IMGA|Medtr5g027920.1	hypothetical protein chr5 11415894-11407915 E EGN_Mt100125 20111014	GO:0006974|response to DNA damage stimulus GO:0007050|cell cycle arrest	GO:0046983|protein dimerization activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00166	A	A1S	Potri.001G134900	Potri.001G134900(AS)	POPTR_0001s01730	sp|O81906|B120_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase B120 OS=Arabidopsis thaliana GN=B120 PE=1 SV=1	AT4G21390.1	| Symbols: B120 | S-locus lectin protein kinase family protein | chr4:11394458-11397474 REVERSE LENGTH=849	LOC_Os01g57480.1	protein|serine/threonine-protein kinase receptor precursor, putative, expressed	IMGA|contig_58312_1.1	Receptor-like protein kinase contig_58312 4100-921 H PREDN 20111014	GO:0002679|respiratory burst involved in defense response GO:0006468|protein phosphorylation GO:0006612|protein targeting to membrane GO:0006944|cellular membrane fusion GO:0006979|response to oxidative stress GO:0009611|response to wounding GO:0009863|salicylic acid mediated signaling pathway GO:0010200|response to chitin GO:0010363|regulation of plant-type hypersensitive response GO:0043069|negative regulation of programmed cell death GO:0048544|recognition of pollen GO:0050832|defense response to fungus	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_00167	A	A1S	Potri.001G135000	Potri.001G135000(AS)	POPTR_0001s01740	NA	NA	AT1G31940.1	| Symbols: | unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35585.1); Has 67 Blast hits to 67 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:11470293-11471154 REVERSE LENGTH=158	LOC_Os02g47000.1	protein|expressed protein	IMGA|Medtr5g027940.1	hypothetical protein chr5 11419250-11422033 F EGN_Mt100125 20111014	NA	NA	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_00168	A	A1S	Potri.001G135100	Potri.001G135100(AS)	POPTR_0001s01750	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00169	A	A1S	Potri.001G135200	Potri.001G135200(AS)	POPTR_0001s01760	sp|Q54NQ0|PSD13_DICDI	26S proteasome non-ATPase regulatory subunit 13 OS=Dictyostelium discoideum GN=psmD13 PE=2 SV=1	AT5G45620.1	| Symbols: | Proteasome component (PCI) domain protein | chr5:18501590-18503868 FORWARD LENGTH=386	LOC_Os01g32800.2	protein|proteasome subunit, putative, expressed	IMGA|Medtr5g027960.1	26S proteasome non-ATPase regulatory subunit chr5 11427346-11432484 F EGN_Mt100125 20111014	GO:0006094|gluconeogenesis GO:0006096|glycolysis GO:0006511|ubiquitin-dependent protein catabolic process GO:0007010|cytoskeleton organization GO:0009651|response to salt stress GO:0009853|photorespiration GO:0010498|proteasomal protein catabolic process GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0043248|proteasome assembly GO:0046686|response to cadmium ion GO:0051604|protein maturation GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	GO:0003674|molecular_function	GO:0000502|proteasome complex GO:0005737|cytoplasm GO:0005829|cytosol GO:0008541|proteasome regulatory particle, lid subcomplex
pt2_00170	A	A1S	Potri.001G135300	Potri.001G135300(AS)	POPTR_0001s01770	sp|P93163|GPA2_SOYBN	Guanine nucleotide-binding protein alpha-2 subunit OS=Glycine max GN=GPA2 PE=2 SV=1	AT1G31930.3	| Symbols: XLG3 | extra-large GTP-binding protein 3 | chr1:11465832-11468961 FORWARD LENGTH=848	LOC_Os11g10050.1	protein|G-protein alpha subunit, putative, expressed	IMGA|Medtr5g027970.1	Guanine nucleotide-binding protein alpha-2 subunit chr5 11441668-11436072 E EGN_Mt100125 20111014	GO:0006184|GTP catabolic process GO:0007165|signal transduction GO:0007186|G-protein coupled receptor signaling pathway GO:0007188|adenylate cyclase-modulating G-protein coupled receptor signaling pathway GO:0009630|gravitropism GO:0009652|thigmotropism GO:0009723|response to ethylene stimulus GO:0009737|response to abscisic acid stimulus GO:0009744|response to sucrose stimulus GO:0009749|response to glucose stimulus GO:0009750|response to fructose stimulus GO:0010555|response to mannitol stimulus GO:0048364|root development GO:2000067|regulation of root morphogenesis	GO:0001664|G-protein coupled receptor binding GO:0003924|GTPase activity GO:0004871|signal transducer activity GO:0019001|guanyl nucleotide binding GO:0031683|G-protein beta/gamma-subunit complex binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005834|heterotrimeric G-protein complex GO:0031234|extrinsic to internal side of plasma membrane
pt2_00171	A	A1S	Potri.001G135400	Potri.001G135400(AS)	POPTR_0001s01780	sp|Q9C6T2|PPR68_ARATH	Pentatricopeptide repeat-containing protein At1g31920 OS=Arabidopsis thaliana GN=PCMP-H11 PE=2 SV=1	AT1G31920.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:11461864-11463684 REVERSE LENGTH=606	LOC_Os02g46980.1	protein|pentatricopeptide, putative, expressed	IMGA|Medtr5g027980.1	Pentatricopeptide repeat-containing protein chr5 11448477-11450534 E EGN_Mt100125 20111014	GO:0008150|biological_process GO:0010075|regulation of meristem growth GO:0016556|mRNA modification	NA	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_00172	A	A1S	Potri.001G135500	Potri.001G135500(AS)	POPTR_0001s01790	sp|P24521|ERG8_YEAST	Phosphomevalonate kinase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERG8 PE=1 SV=2	AT1G31910.1	| Symbols: | GHMP kinase family protein | chr1:11459050-11461649 FORWARD LENGTH=505	LOC_Os03g48160.1	protein|phosphomevalonate kinase, putative, expressed	NA	NA	GO:0016126|sterol biosynthetic process GO:0019745|pentacyclic triterpenoid biosynthetic process	GO:0005524|ATP binding	GO:0005737|cytoplasm
pt2_00173	A	A1S	Potri.001G135600	Potri.001G135600(AS)	POPTR_0001s01800	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00174	A	A1S	Potri.001G135700	Potri.001G135700(AS)	POPTR_0001s01810	sp|Q8VZC9|VPS25_ARATH	Vacuolar protein sorting-associated protein 25 OS=Arabidopsis thaliana GN=VPS25 PE=1 SV=1	AT4G19003.1	| Symbols: VPS25 | E2F/DP family winged-helix DNA-binding domain | chr4:10407571-10408582 REVERSE LENGTH=179	LOC_Os01g46932.1	protein|vacuolar protein-sorting-associated protein 25, putative, expressed	IMGA|Medtr5g028000.1	Vacuolar protein sorting-associated protein chr5 11452163-11456084 F EGN_Mt100125 20111014	GO:0016192|vesicle-mediated transport	GO:0005515|protein binding	GO:0000814|ESCRT II complex GO:0005737|cytoplasm
pt2_00175	A	A2S	Potri.001G135800	Potri.001G135800(AS) Potri.003G098000(DS)	POPTR_0001s01820	sp|Q9C9G6|U195A_ARATH	MIP18 family protein At1g68310 OS=Arabidopsis thaliana GN=At1g68310 PE=2 SV=2	AT1G68310.2	| Symbols: AE7 | Protein of unknown function (DUF59) | chr1:25599812-25601239 FORWARD LENGTH=157	LOC_Os04g50864.1	protein|expressed protein	IMGA|Medtr5g028010.1	Protein FAM96B chr5 11460243-11457272 E EGN_Mt100125 20111014	GO:0009944|polarity specification of adaxial/abaxial axis GO:0042127|regulation of cell proliferation GO:0051726|regulation of cell cycle	GO:0010209|vacuolar sorting signal binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00176	A	A2S	Potri.001G135900	Potri.001G135900(AS) Potri.014G062000(AS)	POPTR_0001s01830	sp|Q96ST2|IWS1_HUMAN	Protein IWS1 homolog OS=Homo sapiens GN=IWS1 PE=1 SV=2	AT1G32130.1	| Symbols: IWS1, ATIWS1 | Transcription elongation factor (TFIIS) family protein | chr1:11559146-11561786 REVERSE LENGTH=502	LOC_Os01g05420.1	protein|IWS1 C-terminus family protein, putative, expressed	IMGA|Medtr5g028030.1	IWS1-like protein chr5 11466638-11471506 F EGN_Mt100125 20111014	GO:0006351|transcription, DNA-dependent GO:0006487|protein N-linked glycosylation GO:0006623|protein targeting to vacuole GO:0006944|cellular membrane fusion GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process GO:0009742|brassinosteroid mediated signaling pathway GO:0016192|vesicle-mediated transport GO:0032784|regulation of DNA-dependent transcription, elongation GO:0048193|Golgi vesicle transport	GO:0003674|molecular_function GO:0003677|DNA binding	GO:0005634|nucleus
pt2_00177	A	A2S	Potri.014G062400	Potri.014G062400(AS) Potri.001G136000(BS)	POPTR_0001s01840	sp|P23922|HBP1A_WHEAT	Transcription factor HBP-1a OS=Triticum aestivum PE=2 SV=1	AT2G35530.1	| Symbols: bZIP16, AtbZIP16 | basic region/leucine zipper transcription factor 16 | chr2:14923280-14926025 REVERSE LENGTH=409	LOC_Os12g13170.2	protein|transcription factor, putative, expressed	IMGA|Medtr5g028850.1	G-box-binding factor chr5 11821253-11827602 E EGN_Mt100125 20111014	GO:0006351|transcription, DNA-dependent GO:0006355|regulation of transcription, DNA-dependent GO:0006473|protein acetylation GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_00178	C	C2A	Potri.001G136000	Potri.001G136000(CA) Potri.014G062400(CA)	sp|P23922|HBP1A_WHEAT	Transcription factor HBP-1a OS=Triticum aestivum PE=2 SV=1	AT2G35530.1	| Symbols: bZIP16, AtbZIP16 | basic region/leucine zipper transcription factor 16 | chr2:14923280-14926025 REVERSE LENGTH=409	LOC_Os12g13170.2	protein|transcription factor, putative, expressed	IMGA|Medtr5g028850.1	G-box-binding factor chr5 11821253-11827602 E EGN_Mt100125 20111014	GO:0006351|transcription, DNA-dependent GO:0006355|regulation of transcription, DNA-dependent GO:0006473|protein acetylation GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_00179	A	A1S	Potri.014G062500	Potri.014G062500(AS)	POPTR_0001s01860	NA	NA	AT1G32160.1	| Symbols: | Protein of unknown function (DUF760) | chr1:11568701-11570241 FORWARD LENGTH=406	LOC_Os04g50860.1	protein|expressed protein	IMGA|Medtr5g028020.1	hypothetical protein chr5 11461564-11465157 F EGN_Mt100125 20111014	GO:0008150|biological_process GO:0009965|leaf morphogenesis GO:0010155|regulation of proton transport GO:0030154|cell differentiation GO:0046777|protein autophosphorylation	GO:0003674|molecular_function	GO:0005634|nucleus GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_00180	A	A1S	Potri.001G136100	Potri.001G136100(AS)	POPTR_0001s01870	sp|Q38908|XTH30_ARATH	Probable xyloglucan endotransglucosylase/hydrolase protein 30 OS=Arabidopsis thaliana GN=XTH30 PE=2 SV=2	AT1G32170.1	| Symbols: XTR4, XTH30 | xyloglucan endotransglucosylase/hydrolase 30 | chr1:11575434-11577776 FORWARD LENGTH=343	LOC_Os02g03550.1	protein|glycosyl hydrolases family 16, putative, expressed	IMGA|Medtr5g029100.1	Xyloglucan endotransglucosylase/hydrolase chr5 11910441-11914089 F EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0006073|cellular glucan metabolic process	GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0016762|xyloglucan:xyloglucosyl transferase activity GO:0016798|hydrolase activity, acting on glycosyl bonds	GO:0005618|cell wall GO:0048046|apoplast
pt2_00181	A	A1S	Potri.001G136200	Potri.001G136200(AS)	POPTR_0001s01880	sp|Q9M9M4|CSLD3_ARATH	Cellulose synthase-like protein D3 OS=Arabidopsis thaliana GN=CSLD3 PE=1 SV=1	AT3G03050.1	| Symbols: CSLD3, KJK, ATCSLD3 | cellulose synthase-like D3 | chr3:687873-691629 FORWARD LENGTH=1145	LOC_Os06g02180.1	protein|CSLD2 - cellulose synthase-like family D, expressed	IMGA|Medtr5g029190.1	Cellulose synthase-like protein chr5 11949044-11944517 E EGN_Mt100125 20111014	GO:0000271|polysaccharide biosynthetic process GO:0009409|response to cold GO:0010583|response to cyclopentenone GO:0030244|cellulose biosynthetic process	GO:0016757|transferase activity, transferring glycosyl groups GO:0016759|cellulose synthase activity GO:0016760|cellulose synthase (UDP-forming) activity GO:0051753|mannan synthase activity	GO:0005768|endosome GO:0005783|endoplasmic reticulum GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0005886|plasma membrane GO:0016020|membrane
pt2_00182	A	A1S	Potri.001G136300	Potri.001G136300(AS)	POPTR_0001s01890	sp|P37707|B2_DAUCA	B2 protein OS=Daucus carota PE=2 SV=1	AT5G61910.3	| Symbols: | DCD (Development and Cell Death) domain protein | chr5:24861091-24863741 REVERSE LENGTH=742	LOC_Os02g51140.1	protein|N-rich protein, putative, expressed	IMGA|Medtr1g018690.1	hypothetical protein chr1 5599102-5595506 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_00183	A	A1S	Potri.001G136400	Potri.001G136400(AS)	POPTR_0001s01920	sp|Q2HJ19|F108A_BOVIN	Abhydrolase domain-containing protein FAM108A OS=Bos taurus GN=FAM108A PE=2 SV=1	AT1G32190.1	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr1:11593059-11595731 REVERSE LENGTH=422	LOC_Os08g06420.2	protein|abhydrolase domain-containing protein FAM108C1, putative, expressed	IMGA|Medtr5g029210.1	Abhydrolase domain-containing protein FAM108C1 chr5 11963126-11958092 E EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0009855|determination of bilateral symmetry GO:0009944|polarity specification of adaxial/abaxial axis GO:0010014|meristem initiation GO:0010075|regulation of meristem growth	GO:0016787|hydrolase activity	GO:0005576|extracellular region GO:0005886|plasma membrane
pt2_00184	A	A1S	Potri.001G136600	Potri.001G136600(AS)	POPTR_0001s01930	sp|Q39639|PLSB_CUCSA	Glycerol-3-phosphate acyltransferase, chloroplastic OS=Cucumis sativus PE=2 SV=1	AT1G32200.2	| Symbols: ATS1, ACT1 | phospholipid/glycerol acyltransferase family protein | chr1:11602223-11605001 REVERSE LENGTH=459	LOC_Os10g42720.1	protein|acyltransferase, putative, expressed	IMGA|Medtr5g029230.1	Glycerol-3-phosphate acyltransferase chr5 11985051-11977783 F EGN_Mt100125 20111014	GO:0006636|unsaturated fatty acid biosynthetic process GO:0006655|phosphatidylglycerol biosynthetic process GO:0008152|metabolic process GO:0015995|chlorophyll biosynthetic process GO:0016117|carotenoid biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway	GO:0004366|glycerol-3-phosphate O-acyltransferase activity GO:0016746|transferase activity, transferring acyl groups	GO:0009507|chloroplast GO:0009536|plastid GO:0009570|chloroplast stroma
pt2_00185	A	A1S	Potri.001G136700	Potri.001G136700(AS)	POPTR_0001s01940	NA	NA	AT3G12890.1	| Symbols: ASML2 | activator of spomin::LUC2 | chr3:4099223-4100277 FORWARD LENGTH=251	LOC_Os03g04620.1	protein|CCT motif family protein, expressed	IMGA|Medtr5g010120.1	Zinc finger protein CONSTANS-like protein chr5 2398574-2400307 H EGN_Mt100125 20111014	GO:0010182|sugar mediated signaling pathway GO:0045893|positive regulation of transcription, DNA-dependent	NA	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_00186	A	A1S	Potri.001G136800	Potri.001G136800(AS)	POPTR_0001s01950	sp|Q9ZWQ7|DAD1_CITUN	Defender against cell death 1 OS=Citrus unshiu GN=DAD1 PE=3 SV=1	AT2G35520.1	| Symbols: DAD2 | Defender against death (DAD family) protein | chr2:14921587-14922657 FORWARD LENGTH=115	LOC_Os04g32550.1	protein|defender against cell death 1, putative, expressed	IMGA|Medtr5g029240.1	Defender against cell death chr5 11989257-11987085 F EGN_Mt100125 20111014	NA	GO:0003674|molecular_function	GO:0016021|integral to membrane
pt2_00187	A	A1S	Potri.001G136900	Potri.001G136900(AS)	POPTR_0001s01960	sp|Q9FVR6|Y1222_ARATH	Uncharacterized protein At1g32220, chloroplastic OS=Arabidopsis thaliana GN=At1g32220 PE=1 SV=1	AT1G32220.1	| Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr1:11608038-11609591 FORWARD LENGTH=296	LOC_Os04g33060.1	protein|NAD dependent epimerase/dehydratase family protein, putative, expressed	IMGA|Medtr5g029260.1	hypothetical protein chr5 11991767-11996132 E EGN_Mt100125 20111014	GO:0006979|response to oxidative stress GO:0042631|cellular response to water deprivation GO:0044237|cellular metabolic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0050662|coenzyme binding	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009579|thylakoid GO:0010287|plastoglobule
pt2_00188	A	A1S	Potri.001G137000	Potri.001G137000(AS)	POPTR_0001s01970	NA	NA	NA	NA	LOC_Os02g46956.2	protein|expressed protein	IMGA|Medtr5g029310.1	hypothetical protein chr5 12015456-12011283 F EGN_Mt100125 20111014	NA	NA	NA
pt2_00189	C	C1S	Potri.001G137200	Potri.001G137200(CS)	sp|Q8RY59|RCD1_ARATH	Inactive poly [ADP-ribose] polymerase RCD1 OS=Arabidopsis thaliana GN=RCD1 PE=1 SV=1	AT1G32230.3	| Symbols: AtRCD1 | WWE protein-protein interaction domain protein family | chr1:11613427-11615748 FORWARD LENGTH=570	LOC_Os10g42710.1	protein|RCD1, putative, expressed	IMGA|Medtr5g032190.1	hypothetical protein chr5 13403190-13409591 E EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0000303|response to superoxide GO:0006096|glycolysis GO:0006486|protein glycosylation GO:0006612|protein targeting to membrane GO:0006623|protein targeting to vacuole GO:0006809|nitric oxide biosynthetic process GO:0006833|water transport GO:0006944|cellular membrane fusion GO:0006970|response to osmotic stress GO:0006972|hyperosmotic response GO:0006979|response to oxidative stress GO:0007030|Golgi organization GO:0008219|cell death GO:0009266|response to temperature stimulus GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009605|response to external stimulus GO:0009651|response to salt stress GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009743|response to carbohydrate stimulus GO:0009751|response to salicylic acid stimulus GO:0009790|embryo development GO:0009816|defense response to bacterium, incompatible interaction GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009873|ethylene mediated signaling pathway GO:0010102|lateral root morphogenesis GO:0010193|response to ozone GO:0010363|regulation of plant-type hypersensitive response GO:0012501|programmed cell death GO:0016192|vesicle-mediated transport GO:0030968|endoplasmic reticulum unfolded protein response GO:0031348|negative regulation of defense response GO:0043069|negative regulation of programmed cell death GO:0046686|response to cadmium ion GO:0048193|Golgi vesicle transport GO:0050832|defense response to fungus GO:2000377|regulation of reactive oxygen species metabolic process	GO:0003950|NAD+ ADP-ribosyltransferase activity GO:0005515|protein binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_00190	A	A1S	Potri.001G137300	Potri.001G137300(AS)	POPTR_0001s01990	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00191	A	A1S	Potri.001G137500	Potri.001G137500(AS)	POPTR_0001s02000	sp|B8G6R5|RL14_CHLAD	50S ribosomal protein L14 OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=rplN PE=3 SV=1	AT5G46160.2	| Symbols: | Ribosomal protein L14p/L23e family protein | chr5:18711456-18712341 REVERSE LENGTH=172	LOC_Os12g42180.1	protein|ribosomal protein, putative, expressed	IMGA|Medtr5g096490.1	50S ribosomal protein L14 chr5 41154166-41149355 F EGN_Mt100125 20111014	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0006354|DNA-dependent transcription, elongation GO:0006412|translation GO:0009086|methionine biosynthetic process	GO:0003735|structural constituent of ribosome	GO:0005840|ribosome GO:0009507|chloroplast GO:0015934|large ribosomal subunit
pt2_00192	A	A1S	Potri.001G137600	Potri.001G137600(AS)	POPTR_0001s02010	sp|Q9C616|KAN2_ARATH	Probable transcription factor KAN2 OS=Arabidopsis thaliana GN=KAN2 PE=2 SV=1	AT1G32240.1	| Symbols: KAN2 | Homeodomain-like superfamily protein | chr1:11625882-11630355 REVERSE LENGTH=388	LOC_Os02g46940.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr5g029470.1	Two-component response regulator EHD1 chr5 12096263-12101771 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009737|response to abscisic acid stimulus GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009944|polarity specification of adaxial/abaxial axis GO:0010162|seed dormancy process GO:0048440|carpel development GO:0048481|ovule development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00193	A	A1S	Potri.001G137700	Potri.001G137700(AS)	POPTR_0001s02020	sp|Q9STM3|REF6_ARATH	Lysine-specific demethylase REF6 OS=Arabidopsis thaliana GN=REF6 PE=1 SV=1	AT5G46910.1	| Symbols: | Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein | chr5:19046888-19050880 FORWARD LENGTH=787	LOC_Os10g42690.1	protein|jmjC domain containing protein, expressed	IMGA|Medtr5g029370.1	Lysine-specific demethylase 5B chr5 12053845-12060460 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0010200|response to chitin	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00194	A	A1S	Potri.001G137800	Potri.001G137800(AS)	POPTR_0001s02030	sp|Q9FJS2|HDG5_ARATH	Homeobox-leucine zipper protein HDG5 OS=Arabidopsis thaliana GN=HDG5 PE=2 SV=3	AT5G46880.1	| Symbols: HB-7, HDG5 | homeobox-7 | chr5:19031540-19035388 FORWARD LENGTH=826	LOC_Os10g42490.1	protein|homeobox and START domains containing protein, putative, expressed	IMGA|Medtr5g029320.1	Homeobox-leucine zipper protein ROC3 chr5 12022721-12028684 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006944|cellular membrane fusion	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_00195	A	A1S	Potri.001G137900	Potri.001G137900(AS)	POPTR_0001s02040	sp|Q94KU5|PAP3_BRACM	Plastid lipid-associated protein 3, chloroplastic OS=Brassica campestris GN=PAP3 PE=2 SV=1	AT2G35490.1	| Symbols: | Plastid-lipid associated protein PAP / fibrillin family protein | chr2:14912309-14913797 REVERSE LENGTH=376	LOC_Os10g42500.1	protein|PAP fibrillin family domain containing protein, expressed	IMGA|Medtr5g029590.1	Plastoglobulin-1 chr5 12177092-12181470 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0005198|structural molecule activity	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009536|plastid GO:0009579|thylakoid GO:0010287|plastoglobule
pt2_00196	B	B2S	Potri.001G138000	Potri.001G138000(BS) Potri.003G095700(DS)	POPTR_0001s02050	sp|Q9AWK2|CML11_ORYSJ	Probable calcium-binding protein CML11 OS=Oryza sativa subsp. japonica GN=CML11 PE=2 SV=1	AT3G03000.1	| Symbols: | EF hand calcium-binding protein family | chr3:677388-677885 FORWARD LENGTH=165	LOC_Os01g32120.1	protein|OsCML11 - Calmodulin-related calcium sensor protein, expressed	IMGA|Medtr5g088320.1	Calmodulin chr5 37281091-37277966 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0005509|calcium ion binding	GO:0005575|cellular_component
pt2_00197	A	A1S	Potri.001G138100	Potri.001G138100(AS)	POPTR_0001s02060	sp|Q2KIN1|DPM2_BOVIN	Dolichol phosphate-mannose biosynthesis regulatory protein OS=Bos taurus GN=DPM2 PE=3 SV=3	AT1G74340.1	| Symbols: | dolichol phosphate-mannose biosynthesis regulatory protein-related | chr1:27948288-27948654 REVERSE LENGTH=80	LOC_Os02g04725.2	protein|dolichol phosphate-mannose biosynthesis regulatory protein, putative, expressed	NA	NA	GO:0009059|macromolecule biosynthetic process	GO:0004582|dolichyl-phosphate beta-D-mannosyltransferase activity	GO:0005783|endoplasmic reticulum GO:0009507|chloroplast GO:0033185|dolichol-phosphate-mannose synthase complex
pt2_00198	A	A1S	Potri.001G138200	Potri.001G138200(AS)	POPTR_0001s02070	NA	NA	AT1G32260.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35480.1); Has 48 Blast hits to 48 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:11640760-11641784 REVERSE LENGTH=202	LOC_Os02g03560.1	protein|expressed protein	IMGA|Medtr5g029600.1	hypothetical protein chr5 12186921-12184071 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_00199	A	A1S	Potri.001G138300	Potri.001G138300(AS)	POPTR_0001s02080	NA	NA	AT2G35470.1	| Symbols: | unknown protein; Has 25 Blast hits to 25 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:14909014-14909720 REVERSE LENGTH=167	NA	NA	IMGA|Medtr5g029620.1	hypothetical protein chr5 12190623-12191666 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_00200	A	A2S	Potri.001G138300	Potri.001G138300(AS) Potri.003G095500(DS)	POPTR_0001s02080	NA	NA	AT2G35470.1	| Symbols: | unknown protein; Has 25 Blast hits to 25 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:14909014-14909720 REVERSE LENGTH=167	NA	NA	IMGA|Medtr5g029620.1	hypothetical protein chr5 12190623-12191666 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_00201	A	A1S	Potri.001G138300	Potri.001G138300(AS)	POPTR_0001s02080	NA	NA	AT2G35470.1	| Symbols: | unknown protein; Has 25 Blast hits to 25 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:14909014-14909720 REVERSE LENGTH=167	NA	NA	IMGA|Medtr5g029620.1	hypothetical protein chr5 12190623-12191666 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_00202	A	A1S	Potri.001G138400	Potri.001G138400(AS)	POPTR_0001s02090	NA	NA	AT4G17720.1	| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr4:9862660-9864498 REVERSE LENGTH=313	LOC_Os04g50790.1	protein|RNA recognition motif, putative, expressed	IMGA|Medtr5g029640.1	Protein vip1 chr5 12209131-12201991 E EGN_Mt100125 20111014	GO:0009627|systemic acquired resistance GO:0034976|response to endoplasmic reticulum stress	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding	GO:0005634|nucleus GO:0005829|cytosol
pt2_00203	A	A2S	Potri.001G138500	Potri.001G138500(AS) Potri.003G095300(DS)	POPTR_0001s02100	sp|P93654|SYP22_ARATH	Syntaxin-22 OS=Arabidopsis thaliana GN=SYP22 PE=1 SV=1	AT5G46860.1	| Symbols: VAM3, ATVAM3, SYP22, ATSYP22, SGR3 | Syntaxin/t-SNARE family protein | chr5:19012342-19013795 REVERSE LENGTH=268	LOC_Os01g15110.1	protein|syntaxin, putative, expressed	IMGA|Medtr5g029650.1	Syntaxin chr5 12211653-12214686 F EGN_Mt100125 20111014	GO:0000902|cell morphogenesis GO:0006623|protein targeting to vacuole GO:0006886|intracellular protein transport GO:0006944|cellular membrane fusion GO:0007030|Golgi organization GO:0007033|vacuole organization GO:0009556|microsporogenesis GO:0009660|amyloplast organization GO:0009959|negative gravitropism GO:0016049|cell growth GO:0016192|vesicle-mediated transport GO:0016197|endosomal transport GO:0048193|Golgi vesicle transport GO:0052543|callose deposition in cell wall	GO:0005484|SNAP receptor activity GO:0005515|protein binding	GO:0000325|plant-type vacuole GO:0005770|late endosome GO:0005773|vacuole GO:0005794|Golgi apparatus GO:0009705|plant-type vacuole membrane GO:0030140|trans-Golgi network transport vesicle
pt2_00204	A	A1S	Potri.001G138600	Potri.001G138600(AS)	POPTR_0001s02110	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006506|GPI anchor biosynthetic process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005789|endoplasmic reticulum membrane
pt2_00205	A	A1S	Potri.001G138700	Potri.001G138700(AS)	POPTR_0001s02120	NA	NA	AT1G32310.1	| Symbols: | unknown protein; Has 28 Blast hits to 28 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:11653619-11654538 FORWARD LENGTH=100	NA	NA	IMGA|Medtr5g029660.1	hypothetical protein chr5 12219482-12222589 F EGN_Mt100125 20111014	GO:0007276|gamete generation GO:0009555|pollen development GO:0009556|microsporogenesis GO:0032875|regulation of DNA endoreduplication GO:0045732|positive regulation of protein catabolic process GO:0046621|negative regulation of organ growth GO:0051302|regulation of cell division GO:0051510|regulation of unidimensional cell growth	GO:0005515|protein binding GO:0010997|anaphase-promoting complex binding	NA
pt2_00206	A	A1S	Potri.001G138800	Potri.001G138800(AS)	POPTR_0001s02130	sp|Q8RXG3|M2K5_ARATH	Mitogen-activated protein kinase kinase 5 OS=Arabidopsis thaliana GN=MKK5 PE=1 SV=2	AT1G32320.1	| Symbols: ATMKK10, MKK10 | MAP kinase kinase 10 | chr1:11655156-11656073 FORWARD LENGTH=305	LOC_Os03g12390.1	protein|STE_MEK_ste7_MAP2K.6 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	IMGA|Medtr5g029670.1	Mitogen-activated protein kinase chr5 12225943-12223724 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004708|MAP kinase kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	NA
pt2_00207	A	A1S	Potri.001G138900	Potri.001G138900(AS)	POPTR_0001s02140	sp|Q40152|HSF8_SOLLC	Heat shock factor protein HSF8 OS=Solanum lycopersicum GN=HSF8 PE=3 SV=1	AT1G32330.1	| Symbols: ATHSFA1D, HSFA1D | heat shock transcription factor A1D | chr1:11657265-11660234 REVERSE LENGTH=485	LOC_Os03g63750.1	protein|HSF-type DNA-binding domain containing protein, expressed	IMGA|Medtr5g029680.1	Heat stress transcription factor A-1d chr5 12231861-12227178 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009407|toxin catabolic process GO:0009408|response to heat	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_00208	A	A1S	Potri.001G139100	Potri.001G139100(AS)	POPTR_0001s02150	sp|Q9QWZ1|RAD1_MOUSE	Cell cycle checkpoint protein RAD1 OS=Mus musculus GN=Rad1 PE=1 SV=1	AT4G17760.1	| Symbols: | damaged DNA binding;exodeoxyribonuclease IIIs | chr4:9871820-9873257 FORWARD LENGTH=300	LOC_Os06g04190.1	protein|rad1, putative, expressed	NA	NA	GO:0006261|DNA-dependent DNA replication GO:0006281|DNA repair	GO:0003684|damaged DNA binding GO:0008853|exodeoxyribonuclease III activity	GO:0005634|nucleus
pt2_00209	A	A1S	Potri.001G139200	Potri.001G139200(AS)	POPTR_0001s02160	sp|Q9SSR4|PPR77_ARATH	Pentatricopeptide repeat-containing protein At1g52620 OS=Arabidopsis thaliana GN=At1g52620 PE=2 SV=1	AT1G52620.1	| Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:19603828-19606287 FORWARD LENGTH=819	LOC_Os11g04295.1	protein|pentatricopeptide repeat domain containing protein, putative, expressed	IMGA|Medtr5g090210.1	Pentatricopeptide repeat-containing protein chr5 38260030-38262180 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_00210	A	A1S	Potri.001G139300	Potri.001G139300(AS)	POPTR_0001s02170	sp|Q9LFC5|PP360_ARATH	Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1	AT5G01110.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:42114-44303 REVERSE LENGTH=729	LOC_Os07g42354.1	protein|PPR repeat domain containing protein, putative, expressed	IMGA|Medtr5g029690.1	Pentatricopeptide repeat-containing protein chr5 12239519-12233813 H EGN_Mt100125 20111014	NA	NA	GO:0005739|mitochondrion
pt2_00211	A	A1S	Potri.001G139400	Potri.001G139400(AS)	POPTR_0001s02180	sp|Q9JI90|RNF14_MOUSE	E3 ubiquitin-protein ligase RNF14 OS=Mus musculus GN=Rnf14 PE=2 SV=2	AT1G32340.1	| Symbols: NHL8 | NDR1/HIN1-like 8 | chr1:11663462-11666037 REVERSE LENGTH=688	LOC_Os04g50720.1	protein|ara54-like RING finger protein, putative, expressed	IMGA|Medtr5g029700.1	E3 ubiquitin-protein ligase RNF14 chr5 12248171-12241203 E EGN_Mt100125 20111014	GO:0006487|protein N-linked glycosylation GO:0006499|N-terminal protein myristoylation GO:0008150|biological_process GO:0009610|response to symbiotic fungus	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_00212	A	A1S	Potri.001G139500	Potri.001G139500(AS)	POPTR_0001s02190	sp|O23617|TPS5_ARATH	Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5 OS=Arabidopsis thaliana GN=TPS5 PE=1 SV=2	AT4G17770.1	| Symbols: ATTPS5, TPS5 | trehalose phosphatase/synthase 5 | chr4:9877055-9880084 FORWARD LENGTH=862	LOC_Os09g23350.1	protein|trehalose synthase, putative, expressed	IMGA|contig_56897_1.1	Trehalose 6-phosphate synthase contig_56897 3087-717 H PREDN 20111014	GO:0000023|maltose metabolic process GO:0005992|trehalose biosynthetic process GO:0008152|metabolic process GO:0019252|starch biosynthetic process GO:0043085|positive regulation of catalytic activity	GO:0003824|catalytic activity GO:0004805|trehalose-phosphatase activity GO:0016757|transferase activity, transferring glycosyl groups	NA
pt2_00213	A	A1S	Potri.001G139600	Potri.001G139600(AS)	POPTR_0001s02200	sp|Q8LPK2|AB2B_ARATH	ABC transporter B family member 2 OS=Arabidopsis thaliana GN=ABCB2 PE=1 SV=3	AT4G25960.1	| Symbols: PGP2 | P-glycoprotein 2 | chr4:13177438-13183425 FORWARD LENGTH=1273	LOC_Os02g46680.1	protein|multidrug resistance protein, putative, expressed	IMGA|Medtr5g029750.1	ABC transporter B family member chr5 12267596-12276446 E EGN_Mt100125 20111014	GO:0006200|ATP catabolic process GO:0006810|transport GO:0010048|vernalization response GO:0010315|auxin efflux GO:0010540|basipetal auxin transport GO:0010541|acropetal auxin transport GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0048440|carpel development GO:0055085|transmembrane transport	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0005886|plasma membrane GO:0009507|chloroplast GO:0016020|membrane GO:0016021|integral to membrane
pt2_00214	A	A1S	Potri.001G139700	Potri.001G139700(AS)	POPTR_0001s02220	sp|Q8LPK2|AB2B_ARATH	ABC transporter B family member 2 OS=Arabidopsis thaliana GN=ABCB2 PE=1 SV=3	AT4G25960.1	| Symbols: PGP2 | P-glycoprotein 2 | chr4:13177438-13183425 FORWARD LENGTH=1273	LOC_Os02g46680.1	protein|multidrug resistance protein, putative, expressed	IMGA|Medtr5g029750.1	ABC transporter B family member chr5 12267596-12276446 E EGN_Mt100125 20111014	GO:0006200|ATP catabolic process GO:0006810|transport GO:0010048|vernalization response GO:0010315|auxin efflux GO:0010540|basipetal auxin transport GO:0010541|acropetal auxin transport GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0048440|carpel development GO:0055085|transmembrane transport	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0005886|plasma membrane GO:0009507|chloroplast GO:0016020|membrane GO:0016021|integral to membrane
pt2_00215	A	A2S	Potri.001G139800	Potri.001G139800(AS) Potri.003G094300(DS)	POPTR_0001s02230	NA	NA	AT3G57280.1	| Symbols: | Transmembrane proteins 14C | chr3:21193960-21195547 FORWARD LENGTH=226	LOC_Os04g39450.2	protein|expressed protein	NA	NA	GO:0008150|biological_process GO:0009627|systemic acquired resistance GO:0034976|response to endoplasmic reticulum stress	NA	GO:0009507|chloroplast GO:0009536|plastid GO:0009706|chloroplast inner membrane GO:0009941|chloroplast envelope GO:0016020|membrane
pt2_00216	A	A1S	Potri.001G139900	Potri.001G139900(AS)	POPTR_0001s02240	sp|Q8GWP0|MYB39_ARATH	Transcription factor MYB39 OS=Arabidopsis thaliana GN=MYB39 PE=2 SV=1	AT5G16770.2	| Symbols: AtMYB9, MYB9 | myb domain protein 9 | chr5:5515209-5516734 FORWARD LENGTH=336	LOC_Os06g11780.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr5g029840.1	Myb-like transcription factor chr5 12304553-12305846 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009737|response to abscisic acid stimulus	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00217	A	A1S	Potri.001G140000	Potri.001G140000(AS)	POPTR_0001s02250	sp|Q84Y01|ITPK1_MAIZE	Inositol-tetrakisphosphate 1-kinase 1 OS=Zea mays GN=ITPK1 PE=2 SV=1	AT5G16760.1	| Symbols: | Inositol 1,3,4-trisphosphate 5/6-kinase family protein | chr5:5509890-5510849 FORWARD LENGTH=319	LOC_Os10g42550.1	protein|Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed	IMGA|Medtr5g005370.1	Inositol-tetrakisphosphate 1-kinase chr5 145991-152030 E EGN_Mt100125 20111014	GO:0010264|myo-inositol hexakisphosphate biosynthetic process GO:0052746|inositol phosphorylation	GO:0000287|magnesium ion binding GO:0003824|catalytic activity GO:0005524|ATP binding GO:0046872|metal ion binding GO:0047325|inositol tetrakisphosphate 1-kinase activity GO:0052725|inositol-1,3,4-trisphosphate 6-kinase activity GO:0052726|inositol-1,3,4-trisphosphate 5-kinase activity	GO:0005622|intracellular GO:0005829|cytosol
pt2_00218	A	A1S	Potri.001G140200	Potri.001G140200(AS)	POPTR_0001s02260	sp|Q8L586|Y4958_ARATH	Uncharacterized membrane protein At4g09580 OS=Arabidopsis thaliana GN=At4g09580 PE=1 SV=1	AT4G17790.1	| Symbols: | SNARE associated Golgi protein family | chr4:9891425-9892675 FORWARD LENGTH=264	LOC_Os02g46660.1	protein|SNARE associated Golgi protein, putative, expressed	IMGA|Medtr5g029890.1	"Membrane protein, putative" chr5 12321066-12324419 F EGN_Mt100125 20111014	GO:0006661|phosphatidylinositol biosynthetic process GO:0008150|biological_process	NA	NA
pt2_00219	A	A2S	Potri.001G140300	Potri.001G140300(AS) Potri.003G093900(DS)	POPTR_0001s02270	sp|Q8C5L7|RBM34_MOUSE	RNA-binding protein 34 OS=Mus musculus GN=Rbm34 PE=1 SV=1	AT5G46840.1	| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr5:19005651-19007609 FORWARD LENGTH=501	LOC_Os03g63730.1	protein|RNA recognition motif containing protein, putative, expressed	IMGA|Medtr5g029900.1	RNA-binding protein chr5 12331050-12325463 F EGN_Mt100125 20111014	GO:0006312|mitotic recombination GO:0009560|embryo sac egg cell differentiation	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005737|cytoplasm
pt2_00220	A	A1S	Potri.001G140400	Potri.001G140400(AS)	POPTR_0001s02280	NA	NA	NA	NA	NA	NA	NA	NA	GO:0016126|sterol biosynthetic process GO:0052541|plant-type cell wall cellulose metabolic process GO:0052546|cell wall pectin metabolic process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00221	A	A1S	Potri.001G140500	Potri.001G140500(AS)	POPTR_0001s02290	NA	NA	AT4G17940.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:9965787-9966778 FORWARD LENGTH=274	LOC_Os10g42610.1	protein|expressed protein	IMGA|Medtr5g029910.1	TPR domain protein chr5 12337535-12336140 E EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0009507|chloroplast
pt2_00222	A	A1S	Potri.001G140600	Potri.001G140600(AS)	POPTR_0001s02300	sp|P43903|QOR_PSEAE	Quinone oxidoreductase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=qor PE=3 SV=2	AT5G61510.1	| Symbols: | GroES-like zinc-binding alcohol dehydrogenase family protein | chr5:24737084-24738975 REVERSE LENGTH=406	LOC_Os03g01190.1	protein|dehydrogenase, putative, expressed	IMGA|contig_75559_1.1	Alcohol dehydrogenase zinc-binding contig_75559 202-4045 E PREDN 20111014	GO:0009644|response to high light intensity GO:0030154|cell differentiation GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0008270|zinc ion binding GO:0016491|oxidoreductase activity	GO:0005829|cytosol GO:0009507|chloroplast
pt2_00223	A	A1S	Potri.001G140700	Potri.001G140700(AS)	POPTR_0001s02320	sp|Q500U8|TKPR1_ARATH	Tetraketide alpha-pyrone reductase 1 OS=Arabidopsis thaliana GN=TKPR1 PE=2 SV=1	AT2G23910.1	| Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr2:10177902-10179789 FORWARD LENGTH=304	LOC_Os10g42620.1	protein|dihydroflavonol-4-reductase, putative, expressed	IMGA|Medtr5g029990.1	Dihydroflavonol-4-reductase chr5 12359202-12361970 F EGN_Mt100125 20111014	GO:0009744|response to sucrose stimulus GO:0009809|lignin biosynthetic process GO:0009813|flavonoid biosynthetic process GO:0010224|response to UV-B GO:0044237|cellular metabolic process GO:0080167|response to karrikin	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0016621|cinnamoyl-CoA reductase activity GO:0050662|coenzyme binding	GO:0005575|cellular_component
pt2_00224	A	A1S	Potri.001G140800	Potri.001G140800(AS)	POPTR_0001s02330	sp|Q84UQ3|C3H56_ORYSJ	Zinc finger CCCH domain-containing protein 56 OS=Oryza sativa subsp. japonica GN=Os08g0159800 PE=2 SV=1	AT1G32360.1	| Symbols: | Zinc finger (CCCH-type) family protein | chr1:11673325-11675162 FORWARD LENGTH=384	LOC_Os08g06330.1	protein|zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent	GO:0003676|nucleic acid binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_00225	A	A2S	Potri.001G140900	Potri.001G140900(AS) Potri.003G093500(DS)	POPTR_0001s02340	sp|O49691|ATL29_ARATH	RING-H2 finger protein ATL29 OS=Arabidopsis thaliana GN=ATL29 PE=2 SV=1	AT4G17920.1	| Symbols: | RING/U-box superfamily protein | chr4:9963221-9964090 REVERSE LENGTH=289	LOC_Os02g52210.2	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr5g076990.1	RING finger-like protein chr5 31845406-31846326 H EGN_Mt100125 20111014	NA	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_00226	A	A1S	Potri.001G141100	Potri.001G141100(AS)	POPTR_0001s02350	sp|Q56XR0|BH071_ARATH	Transcription factor bHLH71 OS=Arabidopsis thaliana GN=BHLH71 PE=1 SV=1	AT5G46690.1	| Symbols: bHLH071 | beta HLH protein 71 | chr5:18945639-18947434 FORWARD LENGTH=327	LOC_Os02g46560.1	protein|helix-loop-helix DNA-binding protein, putative, expressed	IMGA|Medtr1g082480.1	Transcription factor bHLH94 chr1 21189984-21188661 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00227	A	A2S	Potri.001G141200	Potri.001G141200(AS) Potri.003G093100(DS)	POPTR_0001s02360	sp|Q7XLY8|ATL41_ORYSJ	E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica GN=Os04g0590900 PE=2 SV=2	AT5G17600.1	| Symbols: | RING/U-box superfamily protein | chr5:5800029-5801117 REVERSE LENGTH=362	LOC_Os02g46600.1	protein|RING-H2 finger protein ATL5G, putative, expressed	IMGA|Medtr5g030010.1	RING-H2 finger protein ATL3A chr5 12371490-12365294 E EGN_Mt100125 20111014	GO:0080167|response to karrikin	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_00228	A	A1S	Potri.001G141300	Potri.001G141300(AS)	POPTR_0001s02370	sp|P19684|ROC5_NICSY	33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1	AT2G35410.1	| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr2:14898341-14899590 FORWARD LENGTH=308	LOC_Os04g50110.1	protein|RNA recognition motif containing protein, putative, expressed	IMGA|Medtr5g030020.1	31 kDa ribonucleoprotein chr5 12380552-12375117 F EGN_Mt100125 20111014	GO:0006364|rRNA processing GO:0009902|chloroplast relocation GO:0010027|thylakoid membrane organization GO:0015979|photosynthesis GO:0015995|chlorophyll biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0034660|ncRNA metabolic process GO:0042793|transcription from plastid promoter	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009579|thylakoid
pt2_00229	A	A1S	Potri.001G141400	Potri.001G141400(AS)	POPTR_0001s02380	NA	NA	AT5G46700.1	| Symbols: TET1, TRN2 | Tetraspanin family protein | chr5:18951035-18952439 FORWARD LENGTH=269	LOC_Os03g01012.1	protein|tetraspanin family protein, putative, expressed	IMGA|Medtr5g030070.1	hypothetical protein chr5 12391997-12393827 F EGN_Mt100125 20111014	GO:0007389|pattern specification process GO:0007568|aging GO:0008361|regulation of cell size GO:0009855|determination of bilateral symmetry GO:0009926|auxin polar transport GO:0009933|meristem structural organization GO:0009944|polarity specification of adaxial/abaxial axis GO:0009956|radial pattern formation GO:0010014|meristem initiation GO:0010015|root morphogenesis GO:0010051|xylem and phloem pattern formation GO:0010073|meristem maintenance GO:0010075|regulation of meristem growth GO:0010305|leaf vascular tissue pattern formation GO:0019344|cysteine biosynthetic process GO:0040007|growth	GO:0003674|molecular_function	GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016021|integral to membrane
pt2_00230	A	A1S	Potri.001G141500	Potri.001G141500(AS)	POPTR_0001s02390	NA	NA	AT4G17900.1	| Symbols: | PLATZ transcription factor family protein | chr4:9946046-9947697 FORWARD LENGTH=227	LOC_Os02g46610.1	protein|zinc-binding protein, putative, expressed	IMGA|Medtr5g030130.1	hypothetical protein chr5 12420913-12419244 F EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005739|mitochondrion
pt2_00231	A	A1S	Potri.001G141600	Potri.001G141600(AS)	POPTR_0001s02400	NA	NA	AT1G32690.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35200.1); Has 45 Blast hits to 45 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:11821079-11821681 REVERSE LENGTH=200	NA	NA	IMGA|Medtr5g030210.1	hypothetical protein chr5 12462695-12463511 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_00232	A	A1S	Potri.001G141900	Potri.001G141900(AS)	POPTR_0001s02410	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00233	A	A1S	Potri.001G142000	Potri.001G142000(AS)	POPTR_0001s02420	sp|Q9FIQ1|UBP21_ARATH	Ubiquitin carboxyl-terminal hydrolase 21 OS=Arabidopsis thaliana GN=UBP21 PE=2 SV=1	AT5G46740.1	| Symbols: UBP21 | ubiquitin-specific protease 21 | chr5:18965410-18968492 REVERSE LENGTH=732	LOC_Os02g55180.2	protein|ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed	IMGA|Medtr5g030360.2	Ubiquitin carboxyl-terminal hydrolase chr5 12508488-12504846 E EGN_Mt100125 20111014	GO:0006511|ubiquitin-dependent protein catabolic process GO:0009165|nucleotide biosynthetic process	GO:0004221|ubiquitin thiolesterase activity GO:0004843|ubiquitin-specific protease activity	GO:0005634|nucleus
pt2_00234	A	A1S	Potri.001G142100	Potri.001G142100(AS)	POPTR_0001s02430	sp|Q8H100|AGD8_ARATH	Probable ADP-ribosylation factor GTPase-activating protein AGD8 OS=Arabidopsis thaliana GN=AGD8 PE=1 SV=1	AT4G17890.1	| Symbols: AGD8 | ARF-GAP domain 8 | chr4:9937121-9939146 FORWARD LENGTH=413	LOC_Os03g63710.1	protein|GTPase-activating protein, putative, expressed	NA	NA	GO:0032312|regulation of ARF GTPase activity	GO:0003677|DNA binding GO:0008060|ARF GTPase activator activity GO:0008270|zinc ion binding	GO:0005634|nucleus GO:0005829|cytosol
pt2_00235	G	G1	NA	NA	POPTR_0001s02440	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00236	B	B1S	Potri.001G142200	Potri.001G142200(BS)	POPTR_0001s02450	sp|Q39204|RAP1_ARATH	Transcription factor MYC2 OS=Arabidopsis thaliana GN=RAP1 PE=1 SV=2	AT1G32640.1	| Symbols: ATMYC2, RD22BP1, JAI1, JIN1, MYC2, ZBF1 | Basic helix-loop-helix (bHLH) DNA-binding family protein | chr1:11799042-11800913 REVERSE LENGTH=623	LOC_Os10g42430.1	protein|transcription factor MYC7E, putative, expressed	IMGA|Medtr5g030430.1	BHLH transcription factor chr5 12542132-12544882 E EGN_Mt100125 20111014	GO:0006568|tryptophan metabolic process GO:0006612|protein targeting to membrane GO:0009269|response to desiccation GO:0009611|response to wounding GO:0009620|response to fungus GO:0009694|jasmonic acid metabolic process GO:0009695|jasmonic acid biosynthetic process GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009753|response to jasmonic acid stimulus GO:0009759|indole glucosinolate biosynthetic process GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010200|response to chitin GO:0010363|regulation of plant-type hypersensitive response GO:0043069|negative regulation of programmed cell death GO:0043619|regulation of transcription from RNA polymerase II promoter in response to oxidative stress GO:0045893|positive regulation of transcription, DNA-dependent GO:0048364|root development GO:0051090|regulation of sequence-specific DNA binding transcription factor activity GO:2000068|regulation of defense response to insect	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_00237	G	G1	NA	NA	POPTR_0001s02460	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00238	A	A1S	Potri.001G142300	Potri.001G142300(AS)	POPTR_0001s02470	NA	NA	NA	NA	NA	NA	IMGA|Medtr5g030480.1	hypothetical protein chr5 12560916-12557499 E EGN_Mt100125 20111014	NA	NA	NA
pt2_00239	A	A1S	Potri.001G142400	Potri.001G142400(AS)	POPTR_0001s02480	NA	NA	AT2G35230.1	| Symbols: IKU1 | VQ motif-containing protein | chr2:14842871-14844079 FORWARD LENGTH=402	NA	NA	IMGA|Medtr5g030570.1	hypothetical protein chr5 12599543-12600590 E EGN_Mt100125 20111014	GO:0009960|endosperm development GO:0051645|Golgi localization GO:0051646|mitochondrion localization GO:0060151|peroxisome localization GO:0080113|regulation of seed growth	GO:0003674|molecular_function	GO:0005634|nucleus GO:0043078|polar nucleus
pt2_00240	A	A1S	Potri.001G142500	Potri.001G142500(AS)	POPTR_0001s02490	sp|O49686|PYR1_ARATH	Abscisic acid receptor PYR1 OS=Arabidopsis thaliana GN=PYR1 PE=1 SV=1	AT4G17870.1	| Symbols: PYR1, RCAR11 | Polyketide cyclase/dehydrase and lipid transport superfamily protein | chr4:9928792-9929367 FORWARD LENGTH=191	LOC_Os10g42280.1	protein|cyclase/dehydrase family protein, putative, expressed	IMGA|Medtr5g030500.1	Abscisic acid receptor PYR1 chr5 12575005-12572839 E EGN_Mt100125 20111014	GO:0009738|abscisic acid mediated signaling pathway GO:0010029|regulation of seed germination GO:0080163|regulation of protein serine/threonine phosphatase activity	GO:0004872|receptor activity GO:0005515|protein binding GO:0010427|abscisic acid binding GO:0042803|protein homodimerization activity	GO:0005634|nucleus
pt2_00241	A	A1S	Potri.001G142600	Potri.001G142600(AS)	POPTR_0001s02500	sp|Q93XM7|MCAT_ARATH	Mitochondrial carnitine/acylcarnitine carrier-like protein OS=Arabidopsis thaliana GN=BOU PE=1 SV=1	AT5G46800.1	| Symbols: BOU | Mitochondrial substrate carrier family protein | chr5:18988779-18989810 REVERSE LENGTH=300	LOC_Os10g42299.3	protein|mitochondrial carrier protein, putative, expressed	IMGA|Medtr5g030530.1	Mitochondrial carnitine/acylcarnitine carrier-like protein chr5 12590466-12586303 E EGN_Mt100125 20111014	GO:0006810|transport GO:0006839|mitochondrial transport GO:0015822|ornithine transport GO:0055085|transmembrane transport	GO:0005215|transporter activity	GO:0005739|mitochondrion GO:0005743|mitochondrial inner membrane GO:0009507|chloroplast GO:0009536|plastid
pt2_00242	A	A1S	Potri.001G142700	Potri.001G142700(AS)	POPTR_0001s02510	NA	NA	AT2G35290.1	| Symbols: | unknown protein; Has 39 Blast hits to 39 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:14861635-14862000 REVERSE LENGTH=121	LOC_Os03g07400.1	protein|expressed protein	IMGA|Medtr5g014370.1	hypothetical protein chr5 4566664-4567372 F EGN_Mt100125 20111014	GO:0008150|biological_process GO:0009741|response to brassinosteroid stimulus	GO:0003674|molecular_function	NA
pt2_00243	A	A1S	Potri.001G142800	Potri.001G142800(AS)	POPTR_0001s02520	sp|Q9S7C9|ESCA_ARATH	Putative DNA-binding protein ESCAROLA OS=Arabidopsis thaliana GN=ESC PE=2 SV=1	AT4G17800.1	| Symbols: | Predicted AT-hook DNA-binding family protein | chr4:9895549-9896427 REVERSE LENGTH=292	LOC_Os04g50030.1	protein|DNA binding protein, putative, expressed	IMGA|Medtr5g091630.1	hypothetical protein chr5 38920717-38921481 H EGN_Mt100125 20111014	GO:0000041|transition metal ion transport GO:0008150|biological_process GO:0009407|toxin catabolic process GO:0010359|regulation of anion channel activity GO:0010583|response to cyclopentenone	NA	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_00244	A	A1S	Potri.001G142900	Potri.001G142900(AS)	POPTR_0001s02530	sp|Q9LHS9|RBE_ARATH	Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana GN=RBE PE=2 SV=2	AT4G17810.1	| Symbols: | C2H2 and C2HC zinc fingers superfamily protein | chr4:9906918-9907532 FORWARD LENGTH=204	LOC_Os05g20930.1	protein|ZOS5-07 - C2H2 zinc finger protein, expressed	IMGA|Medtr5g014400.1	Zinc finger (C2H2 type) containing protein chr5 4573945-4574700 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006417|regulation of translation GO:0009657|plastid organization GO:0009965|leaf morphogenesis GO:0030154|cell differentiation GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003676|nucleic acid binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_00245	A	A3S	Potri.001G143000	Potri.001G143000(AS) Potri.003G144900(BS) Potri.001G086000(DS)	POPTR_0001s02540	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00246	A	A1S	Potri.001G143100	Potri.001G143100(AS)	POPTR_0001s02550	sp|Q8LPQ8|MSSP2_ARATH	Monosaccharide-sensing protein 2 OS=Arabidopsis thaliana GN=MSSP2 PE=2 SV=2	AT4G35300.3	| Symbols: | tonoplast monosaccharide transporter2 | chr4:16796432-16799071 REVERSE LENGTH=729	LOC_Os10g39440.2	protein|transporter family protein, putative, expressed	IMGA|Medtr5g024740.1	Monosaccharide-sensing protein chr5 9697538-9692309 E EGN_Mt100125 20111014	GO:0006810|transport GO:0055085|transmembrane transport	GO:0005215|transporter activity GO:0005337|nucleoside transmembrane transporter activity GO:0005351|sugar:hydrogen symporter activity GO:0015144|carbohydrate transmembrane transporter activity GO:0022857|transmembrane transporter activity GO:0022891|substrate-specific transmembrane transporter activity	GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0016020|membrane GO:0016021|integral to membrane
pt2_00247	A	A2S	Potri.001G143200	Potri.001G143200(AS) Potri.003G091100(DS)	POPTR_0001s02560	sp|P54638|ARGE_DICDI	Acetylornithine deacetylase OS=Dictyostelium discoideum GN=argE PE=1 SV=2	AT4G17830.1	| Symbols: | Peptidase M20/M25/M40 family protein | chr4:9915916-9918049 FORWARD LENGTH=440	LOC_Os02g46520.1	protein|hydrolase, putative, expressed	IMGA|Medtr5g014410.1	N-acetylornithine deacetylase-like protein chr5 4590351-4594830 E EGN_Mt100125 20111014	GO:0006508|proteolysis GO:0008152|metabolic process	GO:0008237|metallopeptidase activity GO:0016787|hydrolase activity	GO:0005829|cytosol
pt2_00248	A	A1S	Potri.001G143400	Potri.001G143400(AS)	POPTR_0001s02570	NA	NA	AT2G35260.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17840.1); Has 42 Blast hits to 42 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:14849642-14851601 FORWARD LENGTH=382	ChrSy.fgenesh.mRNA.82	protein|expressed protein	IMGA|Medtr5g014430.1	hypothetical protein chr5 4599998-4596922 F EGN_Mt100125 20111014	GO:0008150|biological_process GO:0010155|regulation of proton transport GO:0019761|glucosinolate biosynthetic process GO:0046777|protein autophosphorylation	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0016020|membrane
pt2_00249	A	A1S	Potri.001G143400	Potri.001G143400(AS)	POPTR_0001s02570	NA	NA	AT2G35260.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17840.1); Has 42 Blast hits to 42 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:14849642-14851601 FORWARD LENGTH=382	ChrSy.fgenesh.mRNA.82	protein|expressed protein	IMGA|Medtr5g014430.1	hypothetical protein chr5 4599998-4596922 F EGN_Mt100125 20111014	GO:0008150|biological_process GO:0010155|regulation of proton transport GO:0019761|glucosinolate biosynthetic process GO:0046777|protein autophosphorylation	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0016020|membrane
pt2_00250	C	C1S	Potri.001G143400	Potri.001G143400(CS)	NA	NA	AT2G35260.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17840.1); Has 42 Blast hits to 42 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:14849642-14851601 FORWARD LENGTH=382	ChrSy.fgenesh.mRNA.82	protein|expressed protein	IMGA|Medtr5g014430.1	hypothetical protein chr5 4599998-4596922 F EGN_Mt100125 20111014	GO:0008150|biological_process GO:0010155|regulation of proton transport GO:0019761|glucosinolate biosynthetic process GO:0046777|protein autophosphorylation	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0016020|membrane
pt2_00251	A	A1A	Potri.001G143400	Potri.001G143400(AA)	POPTR_0001s02580	NA	NA	AT2G35260.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17840.1); Has 42 Blast hits to 42 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:14849642-14851601 FORWARD LENGTH=382	ChrSy.fgenesh.mRNA.82	protein|expressed protein	IMGA|Medtr5g014430.1	hypothetical protein chr5 4599998-4596922 F EGN_Mt100125 20111014	GO:0008150|biological_process GO:0010155|regulation of proton transport GO:0019761|glucosinolate biosynthetic process GO:0046777|protein autophosphorylation	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0016020|membrane
pt2_00252	A	A1S	Potri.001G143500	Potri.001G143500(AS)	POPTR_0001s02600	sp|Q9S7C9|ESCA_ARATH	Putative DNA-binding protein ESCAROLA OS=Arabidopsis thaliana GN=ESC PE=2 SV=1	AT4G17950.1	| Symbols: | AT hook motif DNA-binding family protein | chr4:9967295-9969007 REVERSE LENGTH=439	LOC_Os10g42230.1	protein|AT hook motif domain containing protein, expressed	IMGA|contig_62590_1.1	AT-hook motif nuclear localized protein contig_62590 587-3109 E PREDN 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding	GO:0005634|nucleus GO:0005829|cytosol
pt2_00253	A	A2S	Potri.001G143600	Potri.001G143600(AS) Potri.003G090600(DS)	POPTR_0001s02620	NA	NA	AT4G17960.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G46620.1); Has 46 Blast hits to 45 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:9971154-9972227 FORWARD LENGTH=154	LOC_Os02g03575.1	protein|expressed protein	IMGA|Medtr5g014320.1	hypothetical protein chr5 4531997-4529088 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_00254	A	A1S	Potri.001G143700	Potri.001G143700(AS)	POPTR_0001s02630	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006970|response to osmotic stress GO:0009414|response to water deprivation GO:0009790|embryo development GO:0009793|embryo development ending in seed dormancy GO:0048316|seed development	GO:0003674|molecular_function	GO:0009506|plasmodesma
pt2_00255	A	A1S	Potri.001G143800	Potri.001G143800(AS)	POPTR_0001s02640	sp|P54672|AP2M_DICDI	AP-2 complex subunit mu OS=Dictyostelium discoideum GN=apm2 PE=2 SV=2	AT5G46630.1	| Symbols: | Clathrin adaptor complexes medium subunit family protein | chr5:18920580-18923252 FORWARD LENGTH=438	LOC_Os02g46510.1	protein|adaptor complexes medium subunit family domain containing protein, expressed	IMGA|Medtr5g014330.1	AP-2 complex subunit mu chr5 4542498-4534547 F EGN_Mt100125 20111014	GO:0006810|transport GO:0006886|intracellular protein transport GO:0016192|vesicle-mediated transport	NA	GO:0005829|cytosol GO:0005886|plasma membrane GO:0030125|clathrin vesicle coat GO:0030131|clathrin adaptor complex GO:0030132|clathrin coat of coated pit
pt2_00256	A	A1S	Potri.001G143900	Potri.001G143900(AS)	POPTR_0001s02650	sp|Q0J7V9|LSD1_ORYSJ	Protein LSD1 OS=Oryza sativa subsp. japonica GN=LSD1 PE=2 SV=1	AT1G32540.3	| Symbols: LOL1 | lsd one like 1 | chr1:11768043-11769591 FORWARD LENGTH=154	LOC_Os08g06280.7	protein|LSD1 zinc finger domain containing protein, expressed	NA	NA	GO:0009814|defense response, incompatible interaction GO:0034052|positive regulation of plant-type hypersensitive response GO:0043068|positive regulation of programmed cell death GO:2000121|regulation of removal of superoxide radicals	GO:0003677|DNA binding	GO:0005576|extracellular region
pt2_00257	B	B1S	Potri.001G144000	Potri.001G144000(BS)	POPTR_0001s02660	sp|Q58DB6|EYA2_BOVIN	Eyes absent homolog 2 OS=Bos taurus GN=EYA2 PE=2 SV=1	AT2G35320.1	| Symbols: ATEYA, EYA | EYES ABSENT homolog | chr2:14867074-14868387 REVERSE LENGTH=307	LOC_Os06g02028.1	protein|eyes absent homolog 4, putative, expressed	NA	NA	GO:0006470|protein dephosphorylation GO:0007275|multicellular organismal development	GO:0030946|protein tyrosine phosphatase activity, metal-dependent	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00258	A	A1S	Potri.001G144100	Potri.001G144100(AS)	POPTR_0001s02670	sp|P70587|LRRC7_RAT	Leucine-rich repeat-containing protein 7 OS=Rattus norvegicus GN=Lrrc7 PE=1 SV=2	AT4G35470.1	| Symbols: PIRL4 | plant intracellular ras group-related LRR 4 | chr4:16846531-16848448 FORWARD LENGTH=549	LOC_Os10g42190.2	protein|leucine rich repeat containing protein, expressed	IMGA|Medtr5g024780.1	Leucine-rich repeat-containing protein chr5 9726976-9724870 H EGN_Mt100125 20111014	GO:0008150|biological_process GO:0009740|gibberellic acid mediated signaling pathway GO:0010162|seed dormancy process	NA	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_00259	A	A2S	Potri.001G144200	Potri.001G144200(AS) Potri.003G090000(DS)	POPTR_0001s02680	sp|Q8RX22|MIP1_ARATH	MND1-interacting protein 1 OS=Arabidopsis thaliana GN=MIP1 PE=1 SV=1	AT2G35330.2	| Symbols: | RING/U-box superfamily protein | chr2:14869260-14871673 FORWARD LENGTH=711	LOC_Os09g20550.1	protein|zinc finger protein-related, putative, expressed	NA	NA	NA	GO:0008270|zinc ion binding	GO:0005737|cytoplasm
pt2_00260	A	A1S	Potri.001G144300	Potri.001G144300(AS)	POPTR_0001s02700	sp|O49696|ALMTC_ARATH	Aluminum-activated malate transporter 12 OS=Arabidopsis thaliana GN=ALMT12 PE=2 SV=1	AT4G17970.1	| Symbols: ALMT12, ATALMT12 | aluminum-activated, malate transporter 12 | chr4:9975482-9977722 FORWARD LENGTH=560	LOC_Os10g42180.1	protein|aluminum-activated malate transporter, putative, expressed	IMGA|Medtr5g014310.1	hypothetical protein chr5 4526352-4523171 H EGN_Mt100125 20111014	GO:0010044|response to aluminum ion	GO:0008509|anion transmembrane transporter activity	GO:0012505|endomembrane system
pt2_00261	A	A1S	Potri.001G144400	Potri.001G144400(AS)	POPTR_0001s02710	sp|Q7GCL7|NAC74_ORYSJ	NAC domain-containing protein 74 OS=Oryza sativa subsp. japonica GN=NAC74 PE=2 SV=1	AT4G17980.1	| Symbols: anac071, NAC071 | NAC domain containing protein 71 | chr4:9978850-9980038 REVERSE LENGTH=262	LOC_Os10g42130.1	protein|no apical meristem protein, putative, expressed	IMGA|Medtr5g014300.1	NAC domain protein chr5 4518895-4522641 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0007275|multicellular organismal development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00262	A	A1S	Potri.001G144500	Potri.001G144500(AS)	POPTR_0001s02730	sp|Q9LQK7|AB7I_ARATH	Protein ABCI7, chloroplastic OS=Arabidopsis thaliana GN=ABCI7 PE=1 SV=1	AT1G32500.1	| Symbols: ATNAP6, NAP6 | non-intrinsic ABC protein 6 | chr1:11750091-11751994 REVERSE LENGTH=475	LOC_Os01g03650.1	protein|sufB/sufD domain containing protein, putative, expressed	IMGA|Medtr5g014290.1	Protein ABCI7 chr5 4513363-4510073 F EGN_Mt100125 20111014	GO:0006364|rRNA processing GO:0006569|tryptophan catabolic process GO:0006810|transport GO:0009684|indoleacetic acid biosynthetic process GO:0009793|embryo development ending in seed dormancy GO:0009902|chloroplast relocation GO:0010027|thylakoid membrane organization GO:0010207|photosystem II assembly GO:0010228|vegetative to reproductive phase transition of meristem GO:0016226|iron-sulfur cluster assembly GO:0034660|ncRNA metabolic process GO:0035304|regulation of protein dephosphorylation GO:0042793|transcription from plastid promoter GO:0045893|positive regulation of transcription, DNA-dependent GO:0048481|ovule development	GO:0005215|transporter activity GO:0005515|protein binding	GO:0009507|chloroplast GO:0009536|plastid GO:0009570|chloroplast stroma
pt2_00263	A	A2S	Potri.001G144600	Potri.001G144600(AS) Potri.003G089600(DS)	POPTR_0001s02740	sp|Q9LS25|PP420_ARATH	Pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Arabidopsis thaliana GN=At5g46580 PE=2 SV=1	AT5G46580.1	| Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr5:18897510-18899645 REVERSE LENGTH=711	LOC_Os03g63910.1	protein|PPR repeat domain containing protein, putative, expressed	NA	NA	GO:0008150|biological_process GO:0009073|aromatic amino acid family biosynthetic process GO:0009793|embryo development ending in seed dormancy GO:0010103|stomatal complex morphogenesis GO:0016226|iron-sulfur cluster assembly GO:0045036|protein targeting to chloroplast	NA	GO:0009507|chloroplast
pt2_00264	A	A1S	Potri.001G144700	Potri.001G144700(AS)	POPTR_0001s02750	sp|O82302|P2C29_ARATH	Protein phosphatase 2C 29 OS=Arabidopsis thaliana GN=PLL1 PE=1 SV=2	AT2G35350.1	| Symbols: PLL1 | poltergeist like 1 | chr2:14881360-14884116 REVERSE LENGTH=783	LOC_Os02g46490.1	protein|protein phosphatase 2C, putative, expressed	IMGA|contig_113959_1.1	Protein phosphatase 2C contig_113959 455-2236 E PREDN 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006499|N-terminal protein myristoylation GO:0009826|unidimensional cell growth GO:0009933|meristem structural organization GO:0010074|maintenance of meristem identity GO:0018345|protein palmitoylation GO:0018377|protein myristoylation	GO:0003824|catalytic activity GO:0004722|protein serine/threonine phosphatase activity GO:0005543|phospholipid binding	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_00265	A	A1S	Potri.001G144800	Potri.001G144800(AS)	POPTR_0001s02770	sp|Q39732|GCSH_FLAAN	Glycine cleavage system H protein, mitochondrial OS=Flaveria anomala GN=GDCSH PE=2 SV=1	AT1G32470.1	| Symbols: | Single hybrid motif superfamily protein | chr1:11739479-11740246 REVERSE LENGTH=166	LOC_Os10g37180.1	protein|glycine cleavage system H protein, putative, expressed	IMGA|Medtr5g014260.1	Glycine cleavage system H protein chr5 4504957-4503621 F EGN_Mt100125 20111014	GO:0006098|pentose-phosphate shunt GO:0006364|rRNA processing GO:0006546|glycine catabolic process GO:0009657|plastid organization GO:0010103|stomatal complex morphogenesis GO:0010207|photosystem II assembly GO:0015979|photosynthesis GO:0019344|cysteine biosynthetic process GO:0019464|glycine decarboxylation via glycine cleavage system GO:0019684|photosynthesis, light reaction	GO:0004375|glycine dehydrogenase (decarboxylating) activity	GO:0005739|mitochondrion GO:0005960|glycine cleavage complex GO:0009507|chloroplast
pt2_00266	A	A1S	Potri.001G145000	Potri.001G145000(AS)	POPTR_0001s02780	NA	NA	NA	NA	NA	NA	NA	NA	GO:0009686|gibberellin biosynthetic process GO:0055114|oxidation-reduction process	GO:0004497|monooxygenase activity GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding GO:0051777|ent-kaurenoate oxidase activity	GO:0005739|mitochondrion GO:0005783|endoplasmic reticulum
pt2_00267	B	B1S	Potri.001G145100	Potri.001G145100(BS)	POPTR_0001s02790	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00268	A	A1S	Potri.001G145100	Potri.001G145100(AS)	POPTR_0001s02790	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00269	C	C1S	Potri.001G145200	Potri.001G145200(CS)	sp|Q9LQL2|PTR14_ARATH	Nitrate transporter 1.5 OS=Arabidopsis thaliana GN=NRT1.5 PE=1 SV=2	AT1G32450.1	| Symbols: NRT1.5 | nitrate transporter 1.5 | chr1:11715337-11719807 REVERSE LENGTH=614	LOC_Os02g48570.1	protein|peptide transporter PTR2, putative, expressed	IMGA|Medtr5g014150.1	Peptide transporter PTR1 chr5 4456453-4450964 E EGN_Mt100125 20111014	GO:0006598|polyamine catabolic process GO:0006826|iron ion transport GO:0006857|oligopeptide transport GO:0009698|phenylpropanoid metabolic process GO:0009734|auxin mediated signaling pathway GO:0010106|cellular response to iron ion starvation GO:0010167|response to nitrate GO:0015698|inorganic anion transport GO:0015706|nitrate transport GO:0042398|cellular modified amino acid biosynthetic process	GO:0005215|transporter activity GO:0015112|nitrate transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_00270	A	A1S	Potri.001G145200	Potri.001G145200(AS)	POPTR_0001s02810	sp|Q9LQL2|PTR14_ARATH	Nitrate transporter 1.5 OS=Arabidopsis thaliana GN=NRT1.5 PE=1 SV=2	AT1G32450.1	| Symbols: NRT1.5 | nitrate transporter 1.5 | chr1:11715337-11719807 REVERSE LENGTH=614	LOC_Os02g48570.1	protein|peptide transporter PTR2, putative, expressed	IMGA|Medtr5g014150.1	Peptide transporter PTR1 chr5 4456453-4450964 E EGN_Mt100125 20111014	GO:0006598|polyamine catabolic process GO:0006826|iron ion transport GO:0006857|oligopeptide transport GO:0009698|phenylpropanoid metabolic process GO:0009734|auxin mediated signaling pathway GO:0010106|cellular response to iron ion starvation GO:0010167|response to nitrate GO:0015698|inorganic anion transport GO:0015706|nitrate transport GO:0042398|cellular modified amino acid biosynthetic process	GO:0005215|transporter activity GO:0015112|nitrate transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_00271	A	A1S	Potri.001G145300	Potri.001G145300(AS)	POPTR_0001s02820	sp|Q40546|KPYG_TOBAC	Pyruvate kinase isozyme G, chloroplastic OS=Nicotiana tabacum PE=2 SV=1	AT1G32440.1	| Symbols: PKp3 | plastidial pyruvate kinase 3 | chr1:11712205-11714963 FORWARD LENGTH=571	LOC_Os10g42100.1	protein|pyruvate kinase, putative, expressed	IMGA|Medtr5g014140.1	Pyruvate kinase chr5 4444843-4450264 H EGN_Mt100125 20111014	GO:0006096|glycolysis GO:0006633|fatty acid biosynthetic process	GO:0000287|magnesium ion binding GO:0003824|catalytic activity GO:0004743|pyruvate kinase activity GO:0030955|potassium ion binding	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_00272	A	A1S	Potri.001G145400	Potri.001G145400(AS)	POPTR_0001s02830	NA	NA	AT3G57990.1	| Symbols: | unknown protein; Has 1497 Blast hits to 1323 proteins in 52 species: Archae - 0; Bacteria - 4; Metazoa - 23; Fungi - 34; Plants - 61; Viruses - 0; Other Eukaryotes - 1375 (source: NCBI BLink). | chr3:21470244-21471347 REVERSE LENGTH=367	NA	NA	IMGA|Medtr5g014110.1	hypothetical protein chr5 4431866-4427268 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_00273	A	A1S	Potri.001G145500	Potri.001G145500(AS)	POPTR_0001s02840	NA	NA	AT1G32370.1	| Symbols: TOM2B, TTM1 | tobamovirus multiplication 2B | chr1:11677005-11677929 FORWARD LENGTH=122	LOC_Os02g17850.1	protein|TOM2B, putative, expressed	NA	NA	GO:0046786|viral replication complex formation and maintenance	GO:0003674|molecular_function	NA
pt2_00274	A	A2S	Potri.001G145600	Potri.001G145600(AS) Potri.001G145500(AA)	POPTR_0001s02850	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00275	A	A1S	Potri.001G145700	Potri.001G145700(AS)	POPTR_0001s02860	sp|Q42581|KPRS1_ARATH	Ribose-phosphate pyrophosphokinase 1, chloroplastic OS=Arabidopsis thaliana GN=PRS1 PE=2 SV=2	AT2G35390.2	| Symbols: | Phosphoribosyltransferase family protein | chr2:14895528-14897581 REVERSE LENGTH=403	LOC_Os02g03540.1	protein|phosphoribosyl transferase, putative, expressed	IMGA|Medtr5g033300.1	Ribose-phosphate pyrophosphokinase chr5 13937016-13941484 F EGN_Mt100125 20111014	GO:0006783|heme biosynthetic process GO:0009116|nucleoside metabolic process GO:0009156|ribonucleoside monophosphate biosynthetic process GO:0009165|nucleotide biosynthetic process GO:0044249|cellular biosynthetic process	GO:0000287|magnesium ion binding GO:0004749|ribose phosphate diphosphokinase activity	GO:0009507|chloroplast
pt2_00276	A	A1S	Potri.001G145800	Potri.001G145800(AS)	POPTR_0001s02870	sp|Q9SLH7|PER20_ARATH	Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=2 SV=1	AT2G35380.1	| Symbols: | Peroxidase superfamily protein | chr2:14892636-14893958 FORWARD LENGTH=336	LOC_Os01g15830.1	protein|peroxidase precursor, putative, expressed	IMGA|Medtr5g014100.1	Peroxidase chr5 4425066-4426777 E EGN_Mt100125 20111014	GO:0000041|transition metal ion transport GO:0006979|response to oxidative stress GO:0055114|oxidation-reduction process	GO:0004601|peroxidase activity GO:0020037|heme binding	GO:0005576|extracellular region
pt2_00277	A	A1S	Potri.001G145900	Potri.001G145900(AS)	POPTR_0001s02880	sp|Q9FUR2|IP5P2_ARATH	Type I inositol 1,4,5-trisphosphate 5-phosphatase 2 OS=Arabidopsis thaliana GN=IP5P2 PE=1 SV=2	AT4G18010.2	| Symbols: IP5PII | myo-inositol polyphosphate 5-phosphatase 2 | chr4:9991194-9994099 REVERSE LENGTH=613	LOC_Os01g51890.1	protein|endonuclease/exonuclease/phosphatase family domain containing protein, expressed	IMGA|Medtr5g014090.1	"Type I inositol-1,4,5-trisphosphate 5-phosphatase" chr5 4419701-4423653 F EGN_Mt100125 20111014	GO:0007165|signal transduction GO:0009414|response to water deprivation GO:0009611|response to wounding GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009753|response to jasmonic acid stimulus GO:0009845|seed germination GO:0032957|inositol trisphosphate metabolic process GO:0042538|hyperosmotic salinity response GO:0046854|phosphatidylinositol phosphorylation GO:0046855|inositol phosphate dephosphorylation GO:0052542|defense response by callose deposition	GO:0004445|inositol-polyphosphate 5-phosphatase activity	GO:0005737|cytoplasm
pt2_00278	A	A1S	Potri.001G146000	Potri.001G146000(AS)	POPTR_0001s02890	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00279	A	A2S	Potri.001G146100	Potri.001G146100(AS) Potri.003G087800(BS)	POPTR_0001s02900	NA	NA	AT1G32400.3	| Symbols: TOM2A | tobamovirus multiplication 2A | chr1:11689393-11690873 REVERSE LENGTH=280	LOC_Os08g18044.2	protein|tetraspanin family protein, putative, expressed	IMGA|Medtr5g014080.2	GMFP4 chr5 4402853-4408473 F EGN_Mt100125 20111014	GO:0046786|viral replication complex formation and maintenance	GO:0005515|protein binding	GO:0005576|extracellular region GO:0005773|vacuole GO:0005794|Golgi apparatus GO:0009506|plasmodesma GO:0016020|membrane GO:0016021|integral to membrane
pt2_00280	A	A1S	Potri.001G146200	Potri.001G146200(AS)	POPTR_0001s02910	sp|Q6LA43|APRR2_ARATH	Two-component response regulator-like APRR2 OS=Arabidopsis thaliana GN=APRR2 PE=2 SV=2	AT4G18020.6	| Symbols: APRR2 | CheY-like two-component responsive regulator family protein | chr4:10003738-10006682 REVERSE LENGTH=535	LOC_Os06g24070.1	protein|myb-like DNA-binding domain containing protein, expressed	IMGA|Medtr5g014040.2	Two-component response regulator-like protein chr5 4383956-4388762 F EGN_Mt100125 20111014	GO:0000160|two-component signal transduction system (phosphorelay) GO:0006355|regulation of transcription, DNA-dependent GO:0007623|circadian rhythm GO:0009736|cytokinin mediated signaling pathway	GO:0000156|two-component response regulator activity GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_00281	A	A1S	Potri.001G146200	Potri.001G146200(AS)	POPTR_0001s02910	sp|Q6LA43|APRR2_ARATH	Two-component response regulator-like APRR2 OS=Arabidopsis thaliana GN=APRR2 PE=2 SV=2	AT4G18020.6	| Symbols: APRR2 | CheY-like two-component responsive regulator family protein | chr4:10003738-10006682 REVERSE LENGTH=535	LOC_Os06g24070.1	protein|myb-like DNA-binding domain containing protein, expressed	IMGA|Medtr5g014040.2	Two-component response regulator-like protein chr5 4383956-4388762 F EGN_Mt100125 20111014	GO:0000160|two-component signal transduction system (phosphorelay) GO:0006355|regulation of transcription, DNA-dependent GO:0007623|circadian rhythm GO:0009736|cytokinin mediated signaling pathway	GO:0000156|two-component response regulator activity GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_00282	A	A1S	Potri.001G146300	Potri.001G146300(AS)	POPTR_0001s02920	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00283	A	A1S	Potri.001G146400	Potri.001G146400(AS)	POPTR_0001s02930	sp|Q94EJ6|PMTE_ARATH	Probable methyltransferase PMT14 OS=Arabidopsis thaliana GN=At4g18030 PE=1 SV=1	AT4G18030.1	| Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr4:10012850-10015267 REVERSE LENGTH=621	LOC_Os09g24900.2	protein|methyltransferase, putative, expressed	IMGA|Medtr5g040360.1	hypothetical protein chr5 17341792-17337231 F EGN_Mt100125 20111014	GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway	GO:0008168|methyltransferase activity	GO:0005768|endosome GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0009505|plant-type cell wall
pt2_00284	A	A1S	Potri.001G146500	Potri.001G146500(AS)	POPTR_0001s02940	NA	NA	AT5G46560.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Inner nuclear membrane protein MAN1 (InterPro:IPR018996); Has 58 Blast hits to 58 proteins in 29 species: Archae - 0; Bacteria - 4; Metazoa - 11; Fungi - 15; Plants - 20; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). | chr5:18888061-18890090 FORWARD LENGTH=387	LOC_Os03g01016.2	protein|expressed protein	IMGA|Medtr5g014010.1	hypothetical protein chr5 4368613-4372258 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005639|integral to nuclear inner membrane GO:0005783|endoplasmic reticulum GO:0009543|chloroplast thylakoid lumen
pt2_00285	A	A1S	Potri.001G146600	Potri.001G146600(AS)	POPTR_0001s02950	sp|Q9AST6|VSP55_ARATH	Vacuolar protein sorting-associated protein 55 homolog OS=Arabidopsis thaliana GN=At1g32410 PE=2 SV=1	AT1G32410.5	| Symbols: | Vacuolar protein sorting 55 (VPS55) family protein | chr1:11694398-11695297 FORWARD LENGTH=140	LOC_Os02g55980.1	protein|vacuolar protein sorting 55 family protein, putative, expressed	IMGA|Medtr5g013980.1	Vacuolar protein sorting-associated protein-like protein chr5 4363901-4361432 F EGN_Mt100125 20111014	GO:0006810|transport	GO:0005215|transporter activity	GO:0005773|vacuole
pt2_00286	A	A1S	Potri.001G146700	Potri.001G146700(AS)	POPTR_0001s02960	NA	NA	AT3G59840.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 72 Blast hits to 72 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:22105853-22106146 REVERSE LENGTH=97	LOC_Os05g42110.1	protein|allyl alcohol dehydrogenase, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009536|plastid GO:0009941|chloroplast envelope
pt2_00287	A	A1S	Potri.001G146800	Potri.001G146800(AS)	POPTR_0001s02970	NA	NA	AT5G45540.1	| Symbols: | Protein of unknown function (DUF594) | chr5:18458294-18460705 REVERSE LENGTH=803	LOC_Os11g42080.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005886|plasma membrane
pt2_00288	A	A1S	Potri.001G146900	Potri.001G146900(AS)	POPTR_0001s02980	sp|P57750|AGM1_ARATH	Phosphoacetylglucosamine mutase OS=Arabidopsis thaliana GN=DRT101 PE=1 SV=1	AT5G18070.1	| Symbols: DRT101 | phosphoglucosamine mutase-related | chr5:5981117-5982787 FORWARD LENGTH=556	LOC_Os07g09720.1	protein|phosphoacetylglucosamine mutase, putative, expressed	IMGA|Medtr5g013970.1	Phosphoacetylglucosamine mutase chr5 4358530-4352887 E EGN_Mt100125 20111014	GO:0000719|photoreactive repair GO:0005975|carbohydrate metabolic process GO:0006048|UDP-N-acetylglucosamine biosynthetic process GO:0009411|response to UV GO:0019255|glucose 1-phosphate metabolic process	GO:0004610|phosphoacetylglucosamine mutase activity GO:0004614|phosphoglucomutase activity GO:0016868|intramolecular transferase activity, phosphotransferases	GO:0005739|mitochondrion GO:0005829|cytosol GO:0009506|plasmodesma GO:0009507|chloroplast
pt2_00289	A	A1S	Potri.001G147000	Potri.001G147000(AS)	POPTR_0001s02990	sp|Q6NWJ4|DNJC2_DANRE	DnaJ homolog subfamily C member 2 OS=Danio rerio GN=dnajc2 PE=2 SV=1	AT5G45420.1	| Symbols: | Duplicated homeodomain-like superfamily protein | chr5:18405668-18406597 REVERSE LENGTH=309	LOC_Os08g06240.1	protein|MYB family transcription factor, putative, expressed	NA	NA	GO:0048767|root hair elongation	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus GO:0005783|endoplasmic reticulum GO:0005886|plasma membrane
pt2_00290	A	A1S	Potri.001G147100	Potri.001G147100(AS)	POPTR_0001s03000	NA	NA	AT1G31870.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2050, pre-mRNA-splicing factor (InterPro:IPR018609); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr1:11437269-11439821 FORWARD LENGTH=561	LOC_Os08g08080.2	protein|BUD13, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005829|cytosol
pt2_00291	A	A1S	Potri.001G147200	Potri.001G147200(AS)	POPTR_0001s03010	sp|Q850K7|EXLB1_ORYSJ	Expansin-like B1 OS=Oryza sativa subsp. japonica GN=EXLB1 PE=2 SV=2	AT4G17030.1	| Symbols: ATEXLB1, EXPR, AT-EXPR, ATEXPR1, ATHEXP BETA 3.1, EXLB1 | expansin-like B1 | chr4:9581817-9583181 REVERSE LENGTH=250	LOC_Os07g31390.1	protein|beta-expansin precursor, putative, expressed	IMGA|Medtr5g013440.1	Expansin-like protein chr5 4008030-4006305 F EGN_Mt100125 20111014	GO:0009826|unidimensional cell growth GO:0009828|plant-type cell wall loosening GO:0019953|sexual reproduction	NA	GO:0005576|extracellular region
pt2_00292	A	A1S	Potri.001G147300	Potri.001G147300(AS)	POPTR_0001s03020	sp|Q9X0Y1|P1254_THEMA	Phosphorylated carbohydrates phosphatase TM_1254 OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=TM_1254 PE=1 SV=1	AT2G38740.1	| Symbols: | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr2:16194639-16195995 REVERSE LENGTH=244	LOC_Os09g24230.1	protein|haloacid dehalogenase-like hydrolase family protein, putative, expressed	IMGA|Medtr5g013910.1	Pyrophosphatase ppaX chr5 4329631-4331624 F EGN_Mt100125 20111014	GO:0008152|metabolic process	GO:0003824|catalytic activity GO:0016787|hydrolase activity	GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane
pt2_00293	A	A1S	Potri.001G147400	Potri.001G147400(AS)	POPTR_0001s03030	sp|Q9X0Y1|P1254_THEMA	Phosphorylated carbohydrates phosphatase TM_1254 OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=TM_1254 PE=1 SV=1	AT2G38740.1	| Symbols: | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr2:16194639-16195995 REVERSE LENGTH=244	LOC_Os10g41930.2	protein|haloacid dehalogenase-like hydrolase family protein, putative, expressed	IMGA|Medtr5g013910.1	Pyrophosphatase ppaX chr5 4329631-4331624 F EGN_Mt100125 20111014	GO:0008152|metabolic process	GO:0003824|catalytic activity GO:0016787|hydrolase activity	GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane
pt2_00294	A	A1S	Potri.001G147500	Potri.001G147500(AS)	POPTR_0001s03040	sp|Q9FNX5|DRP1E_ARATH	Dynamin-related protein 1E OS=Arabidopsis thaliana GN=DRP1E PE=1 SV=1	AT3G60190.1	| Symbols: ADL4, ADLP2, EDR3, DRP1E, ADL1E, DL1E | DYNAMIN-like 1E | chr3:22244367-22247651 REVERSE LENGTH=624	LOC_Os10g41820.1	protein|dynamin family protein, putative, expressed	IMGA|Medtr5g009150.1	Dynamin-related protein 1A chr5 1886432-1881144 H EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0002831|regulation of response to biotic stimulus GO:0006612|protein targeting to membrane GO:0009595|detection of biotic stimulus GO:0009697|salicylic acid biosynthetic process GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0016192|vesicle-mediated transport GO:0031348|negative regulation of defense response GO:0042742|defense response to bacterium GO:0043900|regulation of multi-organism process GO:0046686|response to cadmium ion GO:0050832|defense response to fungus	GO:0003924|GTPase activity GO:0005525|GTP binding	GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_00295	A	A1S	Potri.001G147600	Potri.001G147600(AS)	POPTR_0001s03050	sp|O49726|PUP9_ARATH	Probable purine permease 9 OS=Arabidopsis thaliana GN=PUP9 PE=2 SV=2	AT4G18210.1	| Symbols: ATPUP10, PUP10 | purine permease 10 | chr4:10076175-10077495 FORWARD LENGTH=390	LOC_Os02g46380.2	protein|purine permease, putative, expressed	IMGA|Medtr5g065080.1	Purine permease chr5 26371801-26373742 H EGN_Mt100125 20111014	GO:0006863|purine nucleobase transport GO:0009624|response to nematode GO:0015931|nucleobase-containing compound transport	GO:0005345|purine nucleobase transmembrane transporter activity	GO:0005737|cytoplasm GO:0016020|membrane
pt2_00296	A	A1S	Potri.001G147700	Potri.001G147700(AS)	POPTR_0001s03060	sp|Q9M9S4|Y1143_ARATH	Probable LRR receptor-like serine/threonine-protein kinase At1g14390 OS=Arabidopsis thaliana GN=At1g14390 PE=2 SV=1	AT1G14390.1	| Symbols: | Leucine-rich repeat protein kinase family protein | chr1:4924277-4926794 FORWARD LENGTH=747	LOC_Os07g07230.1	protein|protein kinase, putative, expressed	IMGA|Medtr5g038600.1	LRR receptor-like serine/threonine-protein kinase EFR chr5 16538056-16535057 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_00297	A	A1S	Potri.001G147700	Potri.001G147700(AS)	POPTR_0001s03060	sp|Q9M9S4|Y1143_ARATH	Probable LRR receptor-like serine/threonine-protein kinase At1g14390 OS=Arabidopsis thaliana GN=At1g14390 PE=2 SV=1	AT1G14390.1	| Symbols: | Leucine-rich repeat protein kinase family protein | chr1:4924277-4926794 FORWARD LENGTH=747	LOC_Os07g07230.1	protein|protein kinase, putative, expressed	IMGA|Medtr5g038600.1	LRR receptor-like serine/threonine-protein kinase EFR chr5 16538056-16535057 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_00298	A	A1S	Potri.001G147800	Potri.001G147800(AS)	POPTR_0001s03070	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00299	G	G1	NA	NA	POPTR_0001s03080	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00300	A	A2S	Potri.001G147900	Potri.001G147900(AS) Potri.003G086700(DS)	POPTR_0001s03090	sp|O80501|RAH1B_ARATH	Ras-related protein RABH1b OS=Arabidopsis thaliana GN=RABH1B PE=1 SV=1	AT2G44610.1	| Symbols: RAB6, ATRABH1B, ATRAB6A, RAB6A | Ras-related small GTP-binding family protein | chr2:18411778-18413883 REVERSE LENGTH=208	LOC_Os07g31370.1	protein|ras-related protein, putative, expressed	IMGA|Medtr5g013900.1	Ras-related protein Rab-6 chr5 4324275-4328602 E EGN_Mt100125 20111014	GO:0006891|intra-Golgi vesicle-mediated transport GO:0006944|cellular membrane fusion GO:0007264|small GTPase mediated signal transduction GO:0015031|protein transport GO:0032940|secretion by cell	GO:0005515|protein binding GO:0005525|GTP binding	GO:0000139|Golgi membrane GO:0005768|endosome GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0005829|cytosol GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane
pt2_00301	A	A1S	Potri.001G148000	Potri.001G148000(AS)	POPTR_0001s03100	sp|Q84Y18|CXIP4_ARATH	CAX-interacting protein 4 OS=Arabidopsis thaliana GN=CXIP4 PE=1 SV=2	AT2G28910.1	| Symbols: CXIP4 | CAX interacting protein 4 | chr2:12415992-12416990 REVERSE LENGTH=332	LOC_Os09g01640.1	protein|CAX-interacting protein 4, putative, expressed	IMGA|Medtr1g044570.1	CAX-interacting protein chr1 13154580-13151432 F EGN_Mt100125 20111014	GO:0006816|calcium ion transport GO:0006869|lipid transport GO:0006891|intra-Golgi vesicle-mediated transport GO:0010043|response to zinc ion GO:0010351|lithium ion transport GO:0016558|protein import into peroxisome matrix GO:0048573|photoperiodism, flowering GO:0051928|positive regulation of calcium ion transport	GO:0003676|nucleic acid binding GO:0008270|zinc ion binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_00302	A	A1S	Potri.001G148100	Potri.001G148100(AS)	POPTR_0001s03110	sp|Q9FJR0|RENT1_ARATH	Regulator of nonsense transcripts 1 homolog OS=Arabidopsis thaliana GN=UPF1 PE=1 SV=2	AT5G47010.1	| Symbols: UPF1, LBA1, ATUPF1 | RNA helicase, putative | chr5:19072009-19078856 FORWARD LENGTH=1254	LOC_Os07g31340.1	protein|regulator of nonsense transcripts 1, putative, expressed	IMGA|Medtr5g013820.1	Regulator of nonsense transcripts-like protein chr5 4291220-4278449 E EGN_Mt100125 20111014	GO:0000184|nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:0009744|response to sucrose stimulus GO:0009755|hormone-mediated signaling pathway GO:0010182|sugar mediated signaling pathway GO:0016246|RNA interference GO:0048585|negative regulation of response to stimulus GO:0048825|cotyledon development	GO:0003677|DNA binding GO:0003724|RNA helicase activity GO:0004386|helicase activity GO:0005524|ATP binding GO:0008270|zinc ion binding GO:0016787|hydrolase activity	GO:0000932|cytoplasmic mRNA processing body GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_00303	B	B1S	Potri.001G148200	Potri.001G148200(BS)	POPTR_0001s03120	NA	NA	NA	NA	LOC_Os04g55250.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_00304	C	C1S	Potri.001G148300	Potri.001G148300(CS)	NA	NA	AT5G47020.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G11700.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:19082005-19089800 FORWARD LENGTH=1421	LOC_Os04g10380.1	protein|glycine-rich protein, putative, expressed	IMGA|Medtr5g013800.1	hypothetical protein chr5 4269926-4257143 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_00305	B	B2S	Potri.001G148300	Potri.001G148300(BS) Potri.003G086200(DS)	POPTR_0001s03140	NA	NA	AT5G47020.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G11700.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:19082005-19089800 FORWARD LENGTH=1421	LOC_Os04g10380.1	protein|glycine-rich protein, putative, expressed	IMGA|Medtr5g013800.1	hypothetical protein chr5 4269926-4257143 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_00306	A	A1S	Potri.001G148400	Potri.001G148400(AS)	POPTR_0001s03160	sp|O04979|LONP2_SPIOL	Lon protease homolog 2, peroxisomal OS=Spinacia oleracea PE=2 SV=2	AT5G47040.1	| Symbols: LON2 | lon protease 2 | chr5:19093356-19098678 REVERSE LENGTH=888	LOC_Os09g36300.1	protein|OsLonP4 - Putative Lon protease homologue, expressed	IMGA|Medtr5g013790.1	Lon protease-like protein chr5 4244709-4253659 F EGN_Mt100125 20111014	GO:0006200|ATP catabolic process GO:0006508|proteolysis GO:0006515|misfolded or incompletely synthesized protein catabolic process GO:0016485|protein processing GO:0016560|protein import into peroxisome matrix, docking GO:0038032|termination of G-protein coupled receptor signaling pathway GO:0040007|growth GO:0048527|lateral root development	GO:0000166|nucleotide binding GO:0004176|ATP-dependent peptidase activity GO:0004252|serine-type endopeptidase activity GO:0005524|ATP binding GO:0008236|serine-type peptidase activity GO:0017111|nucleoside-triphosphatase activity GO:0043565|sequence-specific DNA binding	GO:0005777|peroxisome GO:0005782|peroxisomal matrix GO:0009295|nucleoid GO:0043233|organelle lumen
pt2_00307	A	A1S	Potri.001G148500	Potri.001G148500(AS)	POPTR_0001s03180	NA	NA	AT1G32730.1	| Symbols: | unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF702 (InterPro:IPR007818); Has 120 Blast hits to 118 proteins in 39 species: Archae - 0; Bacteria - 8; Metazoa - 63; Fungi - 4; Plants - 33; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). | chr1:11841077-11842956 FORWARD LENGTH=327	LOC_Os08g03550.1	protein|expressed protein	NA	NA	GO:0016571|histone methylation GO:0048451|petal formation GO:0048453|sepal formation	NA	GO:0009507|chloroplast
pt2_00308	A	A5S	Potri.001G040500	Potri.001G040500(AS) Potri.T132900(DS) Potri.001G039200(DS) Potri.001G040800(DS) Potri.001G038300(DS)	POPTR_0001s03190	sp|Q9SA25|WAKLG_ARATH	Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1	AT1G16260.2	| Symbols: | Wall-associated kinase family protein | chr1:5559708-5562018 REVERSE LENGTH=720	LOC_Os02g02120.1	protein|OsWAK11 - OsWAK receptor-like protein kinase, expressed	IMGA|Medtr5g033690.1	Cysteine-rich receptor-like protein kinase chr5 14100663-14103784 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0010200|response to chitin GO:0046777|protein autophosphorylation GO:0050832|defense response to fungus	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005509|calcium ion binding GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0016021|integral to membrane
pt2_00309	A	A8S	Potri.T132900	Potri.T132900(AS) Potri.T132800(AS) Potri.T166600(BS) Potri.001G040500(BS) Potri.001G039200(BS) Potri.001G040800(BS) Potri.001G038300(BS) Potri.001G039900(DS)	POPTR_0001s03210	sp|Q9SA25|WAKLG_ARATH	Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1	AT1G16260.2	| Symbols: | Wall-associated kinase family protein | chr1:5559708-5562018 REVERSE LENGTH=720	LOC_Os04g55760.1	protein|OsWAK55 - OsWAK receptor-like protein kinase, expressed	IMGA|Medtr5g018570.1	Kinase-like protein chr5 6674294-6679204 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0010200|response to chitin GO:0046777|protein autophosphorylation GO:0050832|defense response to fungus	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005509|calcium ion binding GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0016021|integral to membrane
pt2_00310	G	G1	NA	NA	POPTR_0001s03220	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00311	G	G1	NA	NA	POPTR_0001s03225	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00312	A	A7S	Potri.T132900	Potri.T132900(AS) Potri.T132800(AS) Potri.T166600(BS) Potri.001G038300(BS) Potri.001G039900(BS) Potri.001G039200(DS) Potri.001G040800(DS)	POPTR_0001s03230	sp|Q9SA25|WAKLG_ARATH	Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1	AT1G16260.2	| Symbols: | Wall-associated kinase family protein | chr1:5559708-5562018 REVERSE LENGTH=720	LOC_Os04g55760.1	protein|OsWAK55 - OsWAK receptor-like protein kinase, expressed	IMGA|Medtr5g018570.1	Kinase-like protein chr5 6674294-6679204 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0010200|response to chitin GO:0046777|protein autophosphorylation GO:0050832|defense response to fungus	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005509|calcium ion binding GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0016021|integral to membrane
pt2_00313	A	A1S	Potri.001G040000	Potri.001G040000(AS)	POPTR_0001s03240	sp|Q8RY17|WAKLI_ARATH	Wall-associated receptor kinase-like 22 OS=Arabidopsis thaliana GN=WAKL22 PE=2 SV=1	AT1G79670.1	| Symbols: RFO1, WAKL22 | Wall-associated kinase family protein | chr1:29976887-29979337 REVERSE LENGTH=751	LOC_Os04g55760.1	protein|OsWAK55 - OsWAK receptor-like protein kinase, expressed	IMGA|Medtr5g018570.1	Kinase-like protein chr5 6674294-6679204 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005509|calcium ion binding GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005576|extracellular region GO:0016021|integral to membrane
pt2_00314	B	B1S	Potri.001G040100	Potri.001G040100(BS)	POPTR_0001s03250	NA	NA	AT1G16080.1	| Symbols: | unknown protein; LOCATED IN: apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 81 Blast hits to 81 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). | chr1:5514394-5515761 FORWARD LENGTH=313	LOC_Os08g16570.1	protein|expressed protein	NA	NA	GO:0006098|pentose-phosphate shunt GO:0009965|leaf morphogenesis GO:0010027|thylakoid membrane organization GO:0016117|carotenoid biosynthetic process GO:0030154|cell differentiation	NA	GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope GO:0048046|apoplast
pt2_00315	A	A4S	Potri.T132500	Potri.T132500(AS) Potri.001G040200(AS) Potri.001G041300(BS) Potri.019G100000(DS)	POPTR_0001s03260	sp|P43390|MT2_ACTDE	Metallothionein-like protein type 2 OS=Actinidia deliciosa GN=pKIWI504 PE=2 SV=1	NA	NA	NA	NA	NA	NA	GO:0006878|cellular copper ion homeostasis	GO:0005507|copper ion binding GO:0046872|metal ion binding	NA
pt2_00316	C	C1S	Potri.001G041400	Potri.001G041400(CS)	sp|Q9S9M8|TLP8_ARATH	Tubby-like protein 8 OS=Arabidopsis thaliana GN=TULP8 PE=2 SV=1	AT1G16070.1	| Symbols: AtTLP8, TLP8 | tubby like protein 8 | chr1:5511899-5513779 REVERSE LENGTH=397	LOC_Os02g08310.1	protein|tubby, putative, expressed	IMGA|contig_17208_1.1	Tubby-like F-box protein contig_17208 351-1023 E PREDN 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009620|response to fungus GO:0048443|stamen development	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus GO:0005829|cytosol
pt2_00317	A	A1S	Potri.001G041400	Potri.001G041400(AS)	POPTR_0001s03290	sp|Q9S9M8|TLP8_ARATH	Tubby-like protein 8 OS=Arabidopsis thaliana GN=TULP8 PE=2 SV=1	AT1G16070.1	| Symbols: AtTLP8, TLP8 | tubby like protein 8 | chr1:5511899-5513779 REVERSE LENGTH=397	LOC_Os02g08310.1	protein|tubby, putative, expressed	IMGA|contig_17208_1.1	Tubby-like F-box protein contig_17208 351-1023 E PREDN 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009620|response to fungus GO:0048443|stamen development	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus GO:0005829|cytosol
pt2_00318	A	A1S	Potri.001G041500	Potri.001G041500(AS)	POPTR_0001s03300	sp|Q94AN4|AP2L1_ARATH	AP2-like ethylene-responsive transcription factor At1g16060 OS=Arabidopsis thaliana GN=At1g16060 PE=2 SV=1	AT1G16060.1	| Symbols: ADAP | ARIA-interacting double AP2 domain protein | chr1:5508563-5511609 FORWARD LENGTH=345	LOC_Os06g05340.1	protein|AP2 domain containing protein, expressed	IMGA|Medtr5g031880.1	AP2-like ethylene-responsive transcription factor BBM chr5 13258840-13254528 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009414|response to water deprivation GO:0009651|response to salt stress GO:0009737|response to abscisic acid stimulus GO:0009887|organ morphogenesis GO:0010187|negative regulation of seed germination GO:0040008|regulation of growth	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00319	B	B1S	Potri.001G041600	Potri.001G041600(BS)	POPTR_0001s03310	NA	NA	AT1G79710.1	| Symbols: | Major facilitator superfamily protein | chr1:29995137-29996988 FORWARD LENGTH=497	LOC_Os06g08750.1	protein|integral membrane transporter family protein, putative, expressed	IMGA|Medtr1g014250.1	hypothetical protein chr1 3730042-3725308 E EGN_Mt100125 20111014	GO:0006810|transport	GO:0005215|transporter activity	GO:0005634|nucleus GO:0016020|membrane
pt2_00320	A	A1S	Potri.001G041700	Potri.001G041700(AS)	POPTR_0001s03320	sp|Q9LS40|ASPG1_ARATH	Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1	AT1G79720.1	| Symbols: | Eukaryotic aspartyl protease family protein | chr1:29997259-29998951 REVERSE LENGTH=484	LOC_Os09g25570.1	protein|aspartic proteinase, putative, expressed	IMGA|contig_51649_1.1	Aspartic proteinase nepenthesin-1 contig_51649 769-2767 E PREDN 20111014	GO:0006508|proteolysis	GO:0004190|aspartic-type endopeptidase activity	GO:0005576|extracellular region GO:0048046|apoplast
pt2_00321	A	A1S	Potri.001G041800	Potri.001G041800(AS)	POPTR_0001s03330	NA	NA	AT2G24100.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G30780.1); Has 101 Blast hits to 101 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). | chr2:10244921-10246715 FORWARD LENGTH=466	LOC_Os06g08740.1	protein|expressed protein	IMGA|Medtr1g084010.1	hypothetical protein chr1 21959221-21957297 H EGN_Mt100125 20111014	NA	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00322	A	A1S	Potri.001G041900	Potri.001G041900(AS)	POPTR_0001s03340	NA	NA	AT1G80940.1	| Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr1:30410959-30411943 FORWARD LENGTH=213	LOC_Os02g55080.1	protein|snf1-related kinase interactor 2, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00323	A	A1S	Potri.001G042000	Potri.001G042000(AS)	POPTR_0001s03350	NA	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_00324	A	A1S	Potri.001G042100	Potri.001G042100(AS)	POPTR_0001s03360	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00325	A	A1S	Potri.001G042200	Potri.001G042200(AS)	POPTR_0001s03370	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00326	A	A1S	Potri.001G042300	Potri.001G042300(AS)	POPTR_0001s03380	NA	NA	AT1G63700.1	| Symbols: EMB71, YDA, MAPKKK4 | Protein kinase superfamily protein | chr1:23625208-23629031 REVERSE LENGTH=883	LOC_Os02g44642.1	protein|STE_MEKK_ste11_MAP3K.10 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	IMGA|Medtr5g017110.1	Protein kinase-like protein chr5 5965464-5964403 H EGN_Mt100125 20111014	GO:0000302|response to reactive oxygen species GO:0006468|protein phosphorylation GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009651|response to salt stress GO:0048235|pollen sperm cell differentiation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005515|protein binding GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	NA
pt2_00327	A	A1S	Potri.001G042400	Potri.001G042400(AS)	POPTR_0001s03390	sp|Q9FZ36|M3K2_ARATH	Mitogen-activated protein kinase kinase kinase 2 OS=Arabidopsis thaliana GN=ANP2 PE=2 SV=1	AT3G50310.1	| Symbols: MAPKKK20 | mitogen-activated protein kinase kinase kinase 20 | chr3:18648296-18649324 REVERSE LENGTH=342	LOC_Os02g21700.1	protein|STE_MEKK_ste11_MAP3K.8 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	IMGA|Medtr5g017140.1	Mitogen-activated protein kinase kinase kinase A chr5 5976237-5975296 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0009414|response to water deprivation GO:0009723|response to ethylene stimulus GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0035556|intracellular signal transduction GO:0042538|hyperosmotic salinity response	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_00328	A	A2S	Potri.001G042500	Potri.001G042500(AS) Potri.003G184100(DS)	POPTR_0001s03400	sp|Q9ZUI0|Y2241_ARATH	Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130 OS=Arabidopsis thaliana GN=At2g24130 PE=2 SV=1	AT2G24130.1	| Symbols: | Leucine-rich receptor-like protein kinase family protein | chr2:10258148-10261220 FORWARD LENGTH=980	LOC_Os09g25540.1	protein|receptor-like protein kinase 2 precursor, putative, expressed	IMGA|Medtr5g026150.1	Receptor kinase-like protein chr5 10486068-10481801 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_00329	A	A1S	Potri.001G042600	Potri.001G042600(AS)	POPTR_0001s03410	sp|P09189|HSP7C_PETHY	Heat shock cognate 70 kDa protein OS=Petunia hybrida GN=HSP70 PE=2 SV=1	AT3G12580.1	| Symbols: HSP70, ATHSP70 | heat shock protein 70 | chr3:3991487-3993689 REVERSE LENGTH=650	LOC_Os05g38530.1	protein|DnaK family protein, putative, expressed	IMGA|Medtr5g066800.1	Heat shock protein chr5 27240729-27238467 H EGN_Mt100125 20111014	GO:0006457|protein folding GO:0009266|response to temperature stimulus GO:0009408|response to heat GO:0009615|response to virus GO:0009617|response to bacterium GO:0009644|response to high light intensity GO:0016567|protein ubiquitination GO:0034976|response to endoplasmic reticulum stress GO:0042542|response to hydrogen peroxide GO:0046686|response to cadmium ion	GO:0005524|ATP binding GO:0031625|ubiquitin protein ligase binding	GO:0005618|cell wall GO:0005739|mitochondrion GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0005829|cytosol GO:0005886|plasma membrane GO:0048046|apoplast
pt2_00330	A	A1S	Potri.001G042700	Potri.001G042700(AS)	POPTR_0001s03420	sp|P26413|HSP70_SOYBN	Heat shock 70 kDa protein OS=Glycine max GN=HSP70 PE=3 SV=1	AT3G12580.1	| Symbols: HSP70, ATHSP70 | heat shock protein 70 | chr3:3991487-3993689 REVERSE LENGTH=650	LOC_Os05g38530.1	protein|DnaK family protein, putative, expressed	IMGA|Medtr5g066800.1	Heat shock protein chr5 27240729-27238467 H EGN_Mt100125 20111014	GO:0006457|protein folding GO:0009408|response to heat GO:0009615|response to virus GO:0009644|response to high light intensity GO:0010286|heat acclimation GO:0034976|response to endoplasmic reticulum stress GO:0042542|response to hydrogen peroxide	GO:0005524|ATP binding	GO:0005618|cell wall GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane GO:0009507|chloroplast GO:0016020|membrane
pt2_00331	B	B2A	Potri.001G042900	Potri.001G042900(BA) Potri.001G042800(DS)	POPTR_0001s03430	sp|Q8GSM7|HCT_TOBAC	Hydroxycinnamoyl-Coenzyme A shikimate/quinate hydroxycinnamoyltransferase OS=Nicotiana tabacum GN=HCT PE=1 SV=1	AT5G48930.1	| Symbols: HCT | hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase | chr5:19836654-19838092 REVERSE LENGTH=433	LOC_Os02g39850.1	protein|transferase family protein, putative, expressed	IMGA|Medtr5g076700.1	Benzoyl coenzyme A benzyl alcohol benzoyl transferase chr5 31729976-31732699 H EGN_Mt100125 20111014	GO:0006612|protein targeting to membrane GO:0009611|response to wounding GO:0009805|coumarin biosynthetic process GO:0009809|lignin biosynthetic process GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010252|auxin homeostasis GO:0010363|regulation of plant-type hypersensitive response	GO:0016740|transferase activity GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups GO:0047172|shikimate O-hydroxycinnamoyltransferase activity GO:0047205|quinate O-hydroxycinnamoyltransferase activity	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_00332	A	A1S	Potri.001G042900	Potri.001G042900(AS)	POPTR_0001s03440	sp|Q8GSM7|HCT_TOBAC	Hydroxycinnamoyl-Coenzyme A shikimate/quinate hydroxycinnamoyltransferase OS=Nicotiana tabacum GN=HCT PE=1 SV=1	AT5G48930.1	| Symbols: HCT | hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase | chr5:19836654-19838092 REVERSE LENGTH=433	LOC_Os02g39850.1	protein|transferase family protein, putative, expressed	IMGA|Medtr5g076700.1	Benzoyl coenzyme A benzyl alcohol benzoyl transferase chr5 31729976-31732699 H EGN_Mt100125 20111014	GO:0006612|protein targeting to membrane GO:0009611|response to wounding GO:0009805|coumarin biosynthetic process GO:0009809|lignin biosynthetic process GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010252|auxin homeostasis GO:0010363|regulation of plant-type hypersensitive response	GO:0016740|transferase activity GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups GO:0047172|shikimate O-hydroxycinnamoyltransferase activity GO:0047205|quinate O-hydroxycinnamoyltransferase activity	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_00333	G	G1	NA	NA	POPTR_0001s03450	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00334	A	A1S	Potri.001G043000	Potri.001G043000(AS)	POPTR_0001s03460	sp|Q9SZ53|P2C60_ARATH	Probable protein phosphatase 2C 60 OS=Arabidopsis thaliana GN=At4g31860 PE=2 SV=1	AT4G31860.1	| Symbols: | Protein phosphatase 2C family protein | chr4:15406685-15408589 REVERSE LENGTH=357	LOC_Os06g44210.1	protein|protein phosphatase 2C, putative, expressed	IMGA|Medtr1g014190.2	Protein phosphatase chr1 3701434-3696890 F EGN_Mt100125 20111014	GO:0006470|protein dephosphorylation GO:0006499|N-terminal protein myristoylation GO:0009610|response to symbiotic fungus GO:0016036|cellular response to phosphate starvation GO:0019375|galactolipid biosynthetic process GO:0042631|cellular response to water deprivation	GO:0003824|catalytic activity GO:0004722|protein serine/threonine phosphatase activity	GO:0005634|nucleus GO:0005886|plasma membrane GO:0008287|protein serine/threonine phosphatase complex
pt2_00335	A	A1S	Potri.001G043100	Potri.001G043100(AS)	POPTR_0001s03470	sp|Q9SAG8|DNAJ8_ARATH	Chaperone protein dnaJ 8, chloroplastic OS=Arabidopsis thaliana GN=ATJ8 PE=2 SV=1	AT1G80920.1	| Symbols: J8 | Chaperone DnaJ-domain superfamily protein | chr1:30403863-30404549 REVERSE LENGTH=163	LOC_Os06g44160.1	protein|heat shock protein DnaJ, putative, expressed	NA	NA	GO:0006457|protein folding GO:0006950|response to stress GO:0009416|response to light stimulus	GO:0031072|heat shock protein binding GO:0051082|unfolded protein binding	GO:0005634|nucleus GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_00336	A	A1S	Potri.001G043200	Potri.001G043200(AS)	POPTR_0001s03480	sp|Q9S9N4|MRS21_ARATH	Magnesium transporter MRS2-1 OS=Arabidopsis thaliana GN=MRS2-1 PE=2 SV=1	AT1G16010.3	| Symbols: MGT2 | magnesium transporter 2 | chr1:5495462-5497082 REVERSE LENGTH=442	LOC_Os06g44150.1	protein|CorA-like magnesium transporter protein, putative, expressed	IMGA|Medtr5g045590.1	Magnesium transporter chr5 19583832-19586313 E EGN_Mt100125 20111014	GO:0030001|metal ion transport GO:0055085|transmembrane transport	GO:0015095|magnesium ion transmembrane transporter activity GO:0046873|metal ion transmembrane transporter activity	GO:0005773|vacuole GO:0005886|plasma membrane GO:0016020|membrane
pt2_00337	A	A1S	Potri.001G043200	Potri.001G043200(AS)	POPTR_0001s03480	sp|Q9S9N4|MRS21_ARATH	Magnesium transporter MRS2-1 OS=Arabidopsis thaliana GN=MRS2-1 PE=2 SV=1	AT1G16010.3	| Symbols: MGT2 | magnesium transporter 2 | chr1:5495462-5497082 REVERSE LENGTH=442	LOC_Os06g44150.1	protein|CorA-like magnesium transporter protein, putative, expressed	IMGA|Medtr5g045590.1	Magnesium transporter chr5 19583832-19586313 E EGN_Mt100125 20111014	GO:0030001|metal ion transport GO:0055085|transmembrane transport	GO:0015095|magnesium ion transmembrane transporter activity GO:0046873|metal ion transmembrane transporter activity	GO:0005773|vacuole GO:0005886|plasma membrane GO:0016020|membrane
pt2_00338	C	C1S	Potri.001G043200	Potri.001G043200(CS)	sp|Q9S9N4|MRS21_ARATH	Magnesium transporter MRS2-1 OS=Arabidopsis thaliana GN=MRS2-1 PE=2 SV=1	AT1G16010.3	| Symbols: MGT2 | magnesium transporter 2 | chr1:5495462-5497082 REVERSE LENGTH=442	LOC_Os06g44150.1	protein|CorA-like magnesium transporter protein, putative, expressed	IMGA|Medtr5g045590.1	Magnesium transporter chr5 19583832-19586313 E EGN_Mt100125 20111014	GO:0030001|metal ion transport GO:0055085|transmembrane transport	GO:0015095|magnesium ion transmembrane transporter activity GO:0046873|metal ion transmembrane transporter activity	GO:0005773|vacuole GO:0005886|plasma membrane GO:0016020|membrane
pt2_00339	R	R	NA	NA	POPTR_0001s03490	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00340	A	A2S	Potri.001G043400	Potri.001G043400(AS) Potri.003G183400(BS)	POPTR_0001s03500	sp|F1SRI0|TPPC2_PIG	Trafficking protein particle complex subunit 2 OS=Sus scrofa GN=TRAPPC2 PE=2 SV=2	AT1G80500.1	| Symbols: | SNARE-like superfamily protein | chr1:30271195-30272431 FORWARD LENGTH=135	LOC_Os02g40000.1	protein|trafficking protein particle complex subunit, putative, expressed	NA	NA	GO:0006810|transport GO:0006888|ER to Golgi vesicle-mediated transport	GO:0003674|molecular_function	GO:0005622|intracellular GO:0005737|cytoplasm
pt2_00341	B	B1S	Potri.001G043500	Potri.001G043500(BS)	POPTR_0001s03510	sp|Q9SAH2|PP137_ARATH	Pentatricopeptide repeat-containing protein At1g80880, mitochondrial OS=Arabidopsis thaliana GN=At1g80880 PE=2 SV=1	AT1G80880.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:30395194-30396921 REVERSE LENGTH=540	LOC_Os08g17080.1	protein|PPR repeat domain containing protein, putative, expressed	IMGA|Medtr5g006640.1	Pentatricopeptide repeat-containing protein chr5 779349-781747 H EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005739|mitochondrion
pt2_00342	A	A1S	Potri.001G043600	Potri.001G043600(AS)	POPTR_0001s03520	sp|Q39131|LAML_ARATH	Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=1	AT5G15350.1	| Symbols: ENODL17, AtENODL17 | early nodulin-like protein 17 | chr5:4985184-4986154 REVERSE LENGTH=172	LOC_Os09g38540.1	protein|plastocyanin-like domain containing protein, putative, expressed	IMGA|Medtr5g088000.1	Early nodulin-like protein chr5 37151788-37147251 I EGN_Mt100125 20111014	GO:0006084|acetyl-CoA metabolic process GO:0016126|sterol biosynthetic process GO:0016132|brassinosteroid biosynthetic process GO:0052541|plant-type cell wall cellulose metabolic process GO:0052546|cell wall pectin metabolic process	GO:0005507|copper ion binding GO:0009055|electron carrier activity	GO:0005773|vacuole GO:0005886|plasma membrane GO:0031225|anchored to membrane GO:0046658|anchored to plasma membrane
pt2_00343	A	A1S	Potri.001G043700	Potri.001G043700(AS)	POPTR_0001s03530	sp|Q9SAH3|Y1887_ARATH	Putative receptor-like protein kinase At1g80870 OS=Arabidopsis thaliana GN=At1g80870 PE=2 SV=1	AT1G80870.1	| Symbols: | Protein kinase superfamily protein | chr1:30392133-30394211 FORWARD LENGTH=692	LOC_Os03g14710.1	protein|protein kinase, putative, expressed	IMGA|Medtr1g025070.1	Cysteine-rich receptor-like protein kinase chr1 8092872-8088742 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_00344	C	C1S	Potri.001G043800	Potri.001G043800(CS)	sp|Q9C9H7|RLP12_ARATH	Receptor-like protein 12 OS=Arabidopsis thaliana GN=RLP12 PE=2 SV=2	AT2G34930.1	| Symbols: | disease resistance family protein / LRR family protein | chr2:14737169-14739886 REVERSE LENGTH=905	LOC_Os02g17400.1	protein|leucine rich repeat protein, putative, expressed	IMGA|Medtr5g069580.1	Receptor protein kinase-like protein chr5 28520745-28517219 H EGN_Mt100125 20111014	GO:0006952|defense response GO:0007165|signal transduction GO:0050832|defense response to fungus	NA	GO:0005618|cell wall
pt2_00345	A	A2S	Potri.001G043900	Potri.001G043900(AS) Potri.003G183000(DS)	POPTR_0001s03550	sp|Q9FXH6|CNGC8_ARATH	Putative cyclic nucleotide-gated ion channel 8 OS=Arabidopsis thaliana GN=CNGC8 PE=2 SV=2	AT1G19780.1	| Symbols: ATCNGC8, CNGC8 | cyclic nucleotide gated channel 8 | chr1:6833885-6836578 REVERSE LENGTH=753	LOC_Os03g44440.1	protein|cyclic nucleotide-gated ion channel, putative, expressed	IMGA|Medtr1g064240.1	CNGC5-like protein chr1 16479213-16483284 H EGN_Mt100125 20111014	GO:0006811|ion transport GO:0009827|plant-type cell wall modification GO:0009860|pollen tube growth GO:0048610|cellular process involved in reproduction GO:0048868|pollen tube development GO:0055085|transmembrane transport	GO:0005216|ion channel activity GO:0005516|calmodulin binding GO:0030551|cyclic nucleotide binding	GO:0005886|plasma membrane GO:0016020|membrane
pt2_00346	A	A1S	Potri.001G044000	Potri.001G044000(AS)	POPTR_0001s03560	NA	NA	AT1G73060.1	| Symbols: LPA3 | Low PSII Accumulation 3 | chr1:27479027-27481258 FORWARD LENGTH=358	LOC_Os02g02520.1	protein|expressed protein	NA	NA	GO:0009073|aromatic amino acid family biosynthetic process GO:0010207|photosystem II assembly GO:0016226|iron-sulfur cluster assembly	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009571|proplastid stroma
pt2_00347	A	A1S	Potri.001G044000	Potri.001G044000(AS)	POPTR_0001s03560	NA	NA	AT1G73060.1	| Symbols: LPA3 | Low PSII Accumulation 3 | chr1:27479027-27481258 FORWARD LENGTH=358	LOC_Os02g02520.1	protein|expressed protein	NA	NA	GO:0009073|aromatic amino acid family biosynthetic process GO:0010207|photosystem II assembly GO:0016226|iron-sulfur cluster assembly	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009571|proplastid stroma
pt2_00348	A	A1S	Potri.001G044000	Potri.001G044000(AS)	POPTR_0001s03560	NA	NA	AT1G73060.1	| Symbols: LPA3 | Low PSII Accumulation 3 | chr1:27479027-27481258 FORWARD LENGTH=358	LOC_Os02g02520.1	protein|expressed protein	NA	NA	GO:0009073|aromatic amino acid family biosynthetic process GO:0010207|photosystem II assembly GO:0016226|iron-sulfur cluster assembly	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009571|proplastid stroma
pt2_00349	A	A1S	Potri.001G044000	Potri.001G044000(AS)	POPTR_0001s03560	NA	NA	AT1G73060.1	| Symbols: LPA3 | Low PSII Accumulation 3 | chr1:27479027-27481258 FORWARD LENGTH=358	LOC_Os02g02520.1	protein|expressed protein	NA	NA	GO:0009073|aromatic amino acid family biosynthetic process GO:0010207|photosystem II assembly GO:0016226|iron-sulfur cluster assembly	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009571|proplastid stroma
pt2_00350	A	A1S	Potri.001G044100	Potri.001G044100(AS)	POPTR_0001s03570	NA	NA	AT4G37580.1	| Symbols: HLS1, COP3, UNS2 | Acyl-CoA N-acyltransferases (NAT) superfamily protein | chr4:17658932-17660564 FORWARD LENGTH=403	LOC_Os03g55530.1	protein|HLS, putative, expressed	IMGA|Medtr5g015810.1	hypothetical protein chr5 5289463-5287969 H EGN_Mt100125 20111014	GO:0008152|metabolic process GO:0009640|photomorphogenesis GO:0009723|response to ethylene stimulus GO:0009734|auxin mediated signaling pathway GO:0009826|unidimensional cell growth	GO:0008080|N-acetyltransferase activity	GO:0005575|cellular_component
pt2_00351	A	A1S	Potri.001G044200	Potri.001G044200(AS)	POPTR_0001s03580	NA	NA	AT1G80860.1	| Symbols: ATPLMT, PLMT | phospholipid N-methyltransferase | chr1:30388432-30389284 REVERSE LENGTH=164	LOC_Os02g39880.1	protein|expressed protein	NA	NA	GO:0008654|phospholipid biosynthetic process	GO:0000773|phosphatidyl-N-methylethanolamine N-methyltransferase activity GO:0080101|phosphatidyl-N-dimethylethanolamine N-methyltransferase activity	GO:0009507|chloroplast GO:0043231|intracellular membrane-bounded organelle
pt2_00352	A	A1S	Potri.001G044200	Potri.001G044200(AS)	POPTR_0001s03590	NA	NA	AT1G80860.1	| Symbols: ATPLMT, PLMT | phospholipid N-methyltransferase | chr1:30388432-30389284 REVERSE LENGTH=164	LOC_Os02g39880.1	protein|expressed protein	NA	NA	GO:0008654|phospholipid biosynthetic process	GO:0000773|phosphatidyl-N-methylethanolamine N-methyltransferase activity GO:0080101|phosphatidyl-N-dimethylethanolamine N-methyltransferase activity	GO:0009507|chloroplast GO:0043231|intracellular membrane-bounded organelle
pt2_00353	A	A1S	Potri.001G044300	Potri.001G044300(AS)	POPTR_0001s03600	NA	NA	AT1G15980.1	| Symbols: NDF1, NDH48 | NDH-dependent cyclic electron flow 1 | chr1:5489314-5491199 FORWARD LENGTH=461	LOC_Os08g17390.1	protein|expressed protein	NA	NA	GO:0006098|pentose-phosphate shunt GO:0009773|photosynthetic electron transport in photosystem I GO:0010207|photosystem II assembly GO:0015979|photosynthesis GO:0016117|carotenoid biosynthetic process	NA	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0010598|NAD(P)H dehydrogenase complex (plastoquinone)
pt2_00354	C	C1S	Potri.001G044400	Potri.001G044400(CS)	sp|Q7VG78|GUAA_HELHP	Probable GMP synthase [glutamine-hydrolyzing] OS=Helicobacter hepaticus (strain ATCC 51449 / 3B1) GN=guaA PE=3 SV=1	AT1G15970.1	| Symbols: | DNA glycosylase superfamily protein | chr1:5486544-5488494 REVERSE LENGTH=352	LOC_Os06g44050.1	protein|methyladenine glycosylase, putative, expressed	IMGA|contig_87360_1.1	DNA-3-methyladenine glycosylase I contig_87360 1893-326 F PREDN 20111014	GO:0006281|DNA repair GO:0006284|base-excision repair	GO:0003824|catalytic activity GO:0008725|DNA-3-methyladenine glycosylase activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00355	A	A1S	Potri.001G044500	Potri.001G044500(AS)	POPTR_0001s03620	sp|Q9SAH7|WRK40_ARATH	Probable WRKY transcription factor 40 OS=Arabidopsis thaliana GN=WRKY40 PE=1 SV=1	AT1G80840.1	| Symbols: WRKY40, ATWRKY40 | WRKY DNA-binding protein 40 | chr1:30383834-30385356 FORWARD LENGTH=302	LOC_Os09g25060.1	protein|WRKY76, expressed	IMGA|Medtr1g086790.1	WRKY transcription factor chr1 23203731-23201879 F EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0002237|response to molecule of bacterial origin GO:0002679|respiratory burst involved in defense response GO:0002831|regulation of response to biotic stimulus GO:0006355|regulation of transcription, DNA-dependent GO:0006612|protein targeting to membrane GO:0006944|cellular membrane fusion GO:0009595|detection of biotic stimulus GO:0009611|response to wounding GO:0009612|response to mechanical stimulus GO:0009620|response to fungus GO:0009646|response to absence of light GO:0009695|jasmonic acid biosynthetic process GO:0009697|salicylic acid biosynthetic process GO:0009723|response to ethylene stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009751|response to salicylic acid stimulus GO:0009753|response to jasmonic acid stimulus GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009873|ethylene mediated signaling pathway GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0016045|detection of bacterium GO:0030968|endoplasmic reticulum unfolded protein response GO:0031347|regulation of defense response GO:0031348|negative regulation of defense response GO:0035556|intracellular signal transduction GO:0042742|defense response to bacterium GO:0043069|negative regulation of programmed cell death GO:0043900|regulation of multi-organism process GO:0050691|regulation of defense response to virus by host GO:0050776|regulation of immune response GO:0050832|defense response to fungus	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_00356	B	B1S	Potri.001G044600	Potri.001G044600(BS)	POPTR_0001s03630	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00357	A	A1S	Potri.001G044700	Potri.001G044700(AS)	POPTR_0001s03640	sp|Q9AKH1|FER2_RICRI	2Fe-2S ferredoxin OS=Rickettsia rickettsii GN=fdxB PE=3 SV=1	AT4G21090.3	| Symbols: ATMFDX2, MFDX2 | MITOCHONDRIAL FERREDOXIN 2 | chr4:11256663-11258269 REVERSE LENGTH=197	LOC_Os07g01930.1	protein|2Fe-2S iron-sulfur cluster binding domain containing protein, expressed	NA	NA	GO:0019243|methylglyoxal catabolic process to D-lactate	GO:0009055|electron carrier activity GO:0051536|iron-sulfur cluster binding GO:0051537|2 iron, 2 sulfur cluster binding	GO:0005739|mitochondrion
pt2_00358	A	A1S	Potri.001G044900	Potri.001G044900(AS)	POPTR_0001s03650	sp|Q9S9N8|NRAM6_ARATH	Metal transporter Nramp6 OS=Arabidopsis thaliana GN=NRAMP6 PE=2 SV=2	AT1G15960.1	| Symbols: NRAMP6, ATNRAMP6 | NRAMP metal ion transporter 6 | chr1:5482202-5485066 REVERSE LENGTH=527	LOC_Os06g46310.1	protein|metal transporter Nramp6, putative, expressed	IMGA|AC232874_1019.1	Natural resistance-associated macrophage protein AC232874.5 76731-72335 E EGN_Mt100125 20111014	GO:0006810|transport GO:0006828|manganese ion transport GO:0006875|cellular metal ion homeostasis GO:0015691|cadmium ion transport GO:0030001|metal ion transport GO:0070574|cadmium ion transmembrane transport	GO:0005215|transporter activity GO:0015086|cadmium ion transmembrane transporter activity GO:0015103|inorganic anion transmembrane transporter activity GO:0046873|metal ion transmembrane transporter activity	GO:0009507|chloroplast GO:0016020|membrane
pt2_00359	A	A7S	Potri.001G045900	Potri.001G045900(AS) Potri.001G045000(AS) Potri.001G045100(AS) Potri.001G045500(BS) Potri.001G046400(DS) Potri.001G045400(DS) Potri.001G046100(DS)	POPTR_0001s03660	sp|Q9S9N9|CCR1_ARATH	Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1	AT1G15950.1	| Symbols: CCR1, IRX4, ATCCR1 | cinnamoyl coa reductase 1 | chr1:5478855-5481915 FORWARD LENGTH=344	LOC_Os08g34280.1	protein|cinnamoyl-CoA reductase, putative, expressed	IMGA|Medtr5g072620.1	Dihydroflavonol 4-reductase-like protein chr5 29922618-29926018 E EGN_Mt100125 20111014	GO:0006623|protein targeting to vacuole GO:0009409|response to cold GO:0009809|lignin biosynthetic process GO:0044237|cellular metabolic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0016621|cinnamoyl-CoA reductase activity GO:0050662|coenzyme binding	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_00360	D	D2S	Potri.T134000	Potri.T134000(DS) Potri.001G045200(DS)	POPTR_0001s03680	sp|Q9M7K4|POT5_ARATH	Potassium transporter 5 OS=Arabidopsis thaliana GN=POT5 PE=1 SV=1	AT4G13420.1	| Symbols: HAK5, ATHAK5 | high affinity K+ transporter 5 | chr4:7797038-7802174 REVERSE LENGTH=785	LOC_Os01g70490.1	protein|potassium transporter, putative, expressed	IMGA|Medtr5g070670.1	Potassium transporter chr5 28933662-28942483 E EGN_Mt100125 20111014	GO:0006813|potassium ion transport GO:0071805|potassium ion transmembrane transport	GO:0009674|potassium:sodium symporter activity GO:0015079|potassium ion transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_00361	A	A2S	Potri.T130200	Potri.T130200(AS) Potri.001G134400(BS)	POPTR_0001s03690	sp|Q39214|RPM1_ARATH	Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1 PE=1 SV=1	AT3G07040.1	| Symbols: RPM1, RPS3 | NB-ARC domain-containing disease resistance protein | chr3:2226244-2229024 REVERSE LENGTH=926	LOC_Os08g32880.1	protein|disease resistance protein RPM1, putative, expressed	IMGA|Medtr5g027900.1	Disease resistance protein RPP8 chr5 11392567-11395939 H EGN_Mt100125 20111014	GO:0006952|defense response GO:0009626|plant-type hypersensitive response	GO:0000166|nucleotide binding GO:0005515|protein binding GO:0043531|ADP binding	GO:0005886|plasma membrane
pt2_00362	A	A1S	Potri.T130100	Potri.T130100(AS)	POPTR_0001s03700	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00363	A	A2S	Potri.T129800	Potri.T129800(AS) Potri.001G134500(BS)	POPTR_0001s03710	sp|Q39214|RPM1_ARATH	Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1 PE=1 SV=1	AT3G07040.1	| Symbols: RPM1, RPS3 | NB-ARC domain-containing disease resistance protein | chr3:2226244-2229024 REVERSE LENGTH=926	LOC_Os07g40810.1	protein|NBS-LRR type disease resistance protein, putative, expressed	IMGA|Medtr5g027910.1	Nbs-lrr resistance protein chr5 11402195-11405966 E EGN_Mt100125 20111014	GO:0006952|defense response GO:0009626|plant-type hypersensitive response	GO:0000166|nucleotide binding GO:0005515|protein binding GO:0043531|ADP binding	GO:0005886|plasma membrane
pt2_00364	C	C3S	Potri.T129700	Potri.T129700(CS) Potri.T129800(CS) Potri.T129900(CA)	sp|Q39214|RPM1_ARATH	Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1 PE=1 SV=1	AT3G07040.1	| Symbols: RPM1, RPS3 | NB-ARC domain-containing disease resistance protein | chr3:2226244-2229024 REVERSE LENGTH=926	LOC_Os08g32880.1	protein|disease resistance protein RPM1, putative, expressed	IMGA|Medtr5g027900.1	Disease resistance protein RPP8 chr5 11392567-11395939 H EGN_Mt100125 20111014	GO:0006952|defense response GO:0009626|plant-type hypersensitive response	GO:0000166|nucleotide binding GO:0005515|protein binding GO:0043531|ADP binding	GO:0005886|plasma membrane
pt2_00365	C	C1S	Potri.T129700	Potri.T129700(CS)	sp|Q39214|RPM1_ARATH	Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1 PE=1 SV=1	AT3G07040.1	| Symbols: RPM1, RPS3 | NB-ARC domain-containing disease resistance protein | chr3:2226244-2229024 REVERSE LENGTH=926	LOC_Os08g32880.1	protein|disease resistance protein RPM1, putative, expressed	IMGA|Medtr5g027900.1	Disease resistance protein RPP8 chr5 11392567-11395939 H EGN_Mt100125 20111014	GO:0006952|defense response GO:0009626|plant-type hypersensitive response	GO:0000166|nucleotide binding GO:0005515|protein binding GO:0043531|ADP binding	GO:0005886|plasma membrane
pt2_00366	A	A2S	Potri.001G000200	Potri.001G000200(AS) Potri.003G000200(DS)	POPTR_0001s03740	NA	NA	AT2G01050.1	| Symbols: | zinc ion binding;nucleic acid binding | chr2:68337-69884 REVERSE LENGTH=515	NA	NA	IMGA|Medtr5g062140.1	hypothetical protein chr5 25005759-25007108 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003676|nucleic acid binding GO:0008270|zinc ion binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00367	A	A2S	Potri.001G000300	Potri.001G000300(AS) Potri.001G000400(AA)	POPTR_0001s03750	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00368	A	A1S	Potri.001G000500	Potri.001G000500(AS)	POPTR_0001s03760	sp|Q00624|ASOL_BRANA	L-ascorbate oxidase homolog OS=Brassica napus GN=Bp10 PE=2 SV=1	AT1G55570.1	| Symbols: sks12 | SKU5 similar 12 | chr1:20757882-20759771 FORWARD LENGTH=555	LOC_Os05g40740.3	protein|monocopper oxidase, putative, expressed	IMGA|Medtr5g018270.1	L-ascorbate oxidase-like protein chr5 6538701-6543083 F EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005507|copper ion binding GO:0016491|oxidoreductase activity	GO:0005576|extracellular region
pt2_00369	A	A1S	Potri.001G000600	Potri.001G000600(AS)	POPTR_0001s03770	sp|Q00624|ASOL_BRANA	L-ascorbate oxidase homolog OS=Brassica napus GN=Bp10 PE=2 SV=1	AT1G55570.1	| Symbols: sks12 | SKU5 similar 12 | chr1:20757882-20759771 FORWARD LENGTH=555	LOC_Os05g40740.3	protein|monocopper oxidase, putative, expressed	IMGA|Medtr5g018270.1	L-ascorbate oxidase-like protein chr5 6538701-6543083 F EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005507|copper ion binding GO:0016491|oxidoreductase activity	GO:0005576|extracellular region
pt2_00370	A	A2S	Potri.001G000700	Potri.001G000700(AS) Potri.003G224000(DS)	POPTR_0001s03780	sp|Q9SKZ1|PUR_ARATH	Transcription factor Pur-alpha 1 OS=Arabidopsis thaliana GN=PURA1 PE=1 SV=2	AT2G32080.1	| Symbols: PUR ALPHA-1 | purin-rich alpha 1 | chr2:13642716-13644036 REVERSE LENGTH=296	LOC_Os01g15600.1	protein|PUR ALPHA-1, putative, expressed	NA	NA	GO:0006816|calcium ion transport GO:0006833|water transport GO:0006970|response to osmotic stress GO:0007030|Golgi organization GO:0007033|vacuole organization GO:0009651|response to salt stress GO:0009750|response to fructose stimulus GO:0046686|response to cadmium ion GO:0048767|root hair elongation	GO:0003676|nucleic acid binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_00371	A	A1S	Potri.001G000700	Potri.001G000700(AS)	POPTR_0001s03780	sp|Q9SKZ1|PUR_ARATH	Transcription factor Pur-alpha 1 OS=Arabidopsis thaliana GN=PURA1 PE=1 SV=2	AT2G32080.1	| Symbols: PUR ALPHA-1 | purin-rich alpha 1 | chr2:13642716-13644036 REVERSE LENGTH=296	LOC_Os01g15600.1	protein|PUR ALPHA-1, putative, expressed	NA	NA	GO:0006816|calcium ion transport GO:0006833|water transport GO:0006970|response to osmotic stress GO:0007030|Golgi organization GO:0007033|vacuole organization GO:0009651|response to salt stress GO:0009750|response to fructose stimulus GO:0046686|response to cadmium ion GO:0048767|root hair elongation	GO:0003676|nucleic acid binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_00372	A	A1S	Potri.001G000800	Potri.001G000800(AS)	POPTR_0001s03800	sp|O81635|ATK4_ARATH	Kinesin-4 OS=Arabidopsis thaliana GN=ATK4 PE=1 SV=2	AT1G55550.1	| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:20748915-20752862 FORWARD LENGTH=859	LOC_Os01g15540.1	protein|kinesin motor domain containing protein, putative, expressed	IMGA|Medtr5g031470.1	Kinesin-4 chr5 13075037-13067334 E EGN_Mt100125 20111014	NA	GO:0003777|microtubule motor activity GO:0005524|ATP binding	GO:0005739|mitochondrion
pt2_00373	A	A1S	Potri.001G000900	Potri.001G000900(AS)	POPTR_0001s03810	NA	NA	AT3G13410.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55546.1); Has 49 Blast hits to 49 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | chr3:4362149-4364032 REVERSE LENGTH=321	LOC_Os11g03380.1	protein|expressed protein	NA	NA	GO:0000902|cell morphogenesis GO:0006816|calcium ion transport GO:0007030|Golgi organization GO:0007033|vacuole organization GO:0008150|biological_process GO:0009651|response to salt stress GO:0016049|cell growth GO:0048193|Golgi vesicle transport	GO:0003674|molecular_function	GO:0005783|endoplasmic reticulum
pt2_00374	A	A1S	Potri.001G001000	Potri.001G001000(AS)	POPTR_0001s03820	NA	NA	NA	NA	LOC_Os01g15550.1	protein|expressed protein	NA	NA	NA	NA	NA
pt2_00375	A	A2S	Potri.001G001100	Potri.001G001100(AS) Potri.003G223500(DS)	POPTR_0001s03830	sp|O80622|EXP15_ARATH	Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=2 SV=2	AT2G03090.1	| Symbols: ATEXPA15, EXP15, ATEXP15, ATHEXP ALPHA 1.3, EXPA15 | expansin A15 | chr2:917361-918554 REVERSE LENGTH=253	LOC_Os02g51040.1	protein|expansin precursor, putative, expressed	IMGA|Medtr5g041700.1	Expansin chr5 17886520-17884348 F EGN_Mt100125 20111014	GO:0006949|syncytium formation GO:0009664|plant-type cell wall organization GO:0009826|unidimensional cell growth GO:0009828|plant-type cell wall loosening GO:0009831|plant-type cell wall modification involved in multidimensional cell growth GO:0010089|xylem development GO:0044036|cell wall macromolecule metabolic process	NA	GO:0005576|extracellular region
pt2_00376	A	A1S	Potri.001G001200	Potri.001G001200(AS)	POPTR_0001s03840	NA	NA	AT1G55540.1	| Symbols: emb1011 | Nuclear pore complex protein | chr1:20734759-20743049 REVERSE LENGTH=1816	NA	NA	NA	NA	GO:0007062|sister chromatid cohesion GO:0007131|reciprocal meiotic recombination GO:0008150|biological_process GO:0009790|embryo development GO:0009793|embryo development ending in seed dormancy GO:0033044|regulation of chromosome organization GO:0042138|meiotic DNA double-strand break formation GO:0045132|meiotic chromosome segregation	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005739|mitochondrion
pt2_00377	C	C1A	Potri.001G001200	Potri.001G001200(CA)	NA	NA	AT1G55540.1	| Symbols: emb1011 | Nuclear pore complex protein | chr1:20734759-20743049 REVERSE LENGTH=1816	NA	NA	NA	NA	GO:0007062|sister chromatid cohesion GO:0007131|reciprocal meiotic recombination GO:0008150|biological_process GO:0009790|embryo development GO:0009793|embryo development ending in seed dormancy GO:0033044|regulation of chromosome organization GO:0042138|meiotic DNA double-strand break formation GO:0045132|meiotic chromosome segregation	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005739|mitochondrion
pt2_00378	A	A1S	Potri.001G001300	Potri.001G001300(AS)	POPTR_0001s03860	NA	NA	AT4G26410.1	| Symbols: | Uncharacterised conserved protein UCP022280 | chr4:13346760-13348791 FORWARD LENGTH=263	LOC_Os03g20860.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005739|mitochondrion
pt2_00379	C	C1S	Potri.001G001400	Potri.001G001400(CS)	NA	NA	AT1G55535.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13420.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr1:20732081-20733802 REVERSE LENGTH=260	LOC_Os07g12220.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_00380	A	A1S	Potri.001G001500	Potri.001G001500(AS)	POPTR_0001s03880	sp|Q8LPN7|RNG1L_ARATH	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=2 SV=1	AT5G56340.1	| Symbols: ATCRT1 | RING/U-box superfamily protein | chr5:22818254-22819444 FORWARD LENGTH=396	LOC_Os05g40980.1	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr1g114320.1	RING finger protein chr1 33124623-33126845 F EGN_Mt100125 20111014	NA	GO:0008270|zinc ion binding	NA
pt2_00381	A	A1S	Potri.001G001600	Potri.001G001600(AS)	POPTR_0001s03890	sp|Q42954|KPYC_TOBAC	Pyruvate kinase, cytosolic isozyme OS=Nicotiana tabacum PE=2 SV=1	AT5G56350.1	| Symbols: | Pyruvate kinase family protein | chr5:22820254-22822529 REVERSE LENGTH=498	LOC_Os01g16960.1	protein|pyruvate kinase, putative, expressed	IMGA|Medtr5g014140.1	Pyruvate kinase chr5 4444843-4450264 H EGN_Mt100125 20111014	GO:0006094|gluconeogenesis GO:0006096|glycolysis GO:0006865|amino acid transport GO:0007010|cytoskeleton organization GO:0010498|proteasomal protein catabolic process	GO:0000287|magnesium ion binding GO:0003824|catalytic activity GO:0004743|pyruvate kinase activity GO:0030955|potassium ion binding	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_00382	A	A1S	Potri.001G001700	Potri.001G001700(AS)	POPTR_0001s03900	sp|O08795|GLU2B_MOUSE	Glucosidase 2 subunit beta OS=Mus musculus GN=Prkcsh PE=1 SV=1	AT5G56360.1	| Symbols: PSL4 | calmodulin-binding protein | chr5:22823586-22827950 REVERSE LENGTH=647	LOC_Os01g16970.1	protein|glucosidase II beta subunit-like domain containing protein, expressed	NA	NA	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0009086|methionine biosynthetic process GO:0030244|cellulose biosynthetic process GO:0042742|defense response to bacterium GO:0048193|Golgi vesicle transport	GO:0005516|calmodulin binding	GO:0005783|endoplasmic reticulum GO:0009507|chloroplast
pt2_00383	C	C1S	Potri.001G001800	Potri.001G001800(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00384	A	A1S	Potri.001G001800	Potri.001G001800(AS)	POPTR_0001s03920	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00385	A	A2S	Potri.001G001900	Potri.001G001900(AS) Potri.001G001800(AA)	POPTR_0001s03930	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00386	A	A1S	Potri.001G002000	Potri.001G002000(AS)	POPTR_0001s03940	sp|Q4R5D9|YTHD2_MACFA	YTH domain family protein 2 OS=Macaca fascicularis GN=YTHDF2 PE=2 SV=1	AT3G13460.1	| Symbols: ECT2 | evolutionarily conserved C-terminal region 2 | chr3:4385274-4388220 REVERSE LENGTH=667	LOC_Os03g06240.2	protein|YT521-B-like family domain containing protein, expressed	NA	NA	NA	GO:0005515|protein binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol
pt2_00387	A	A1S	Potri.001G002200	Potri.001G002200(AS)	POPTR_0001s03950	sp|O65351|SUBL_ARATH	Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1	AT4G26330.1	| Symbols: UNE17, ATSBT3.18 | Subtilisin-like serine endopeptidase family protein | chr4:13320408-13323461 FORWARD LENGTH=746	LOC_Os03g06290.1	protein|OsSub27 - Putative Subtilisin homologue, expressed	IMGA|Medtr5g025010.1	Subtilisin-like protease chr5 9863093-9866617 E EGN_Mt100125 20111014	GO:0006508|proteolysis GO:0008152|metabolic process GO:0009567|double fertilization forming a zygote and endosperm GO:0043086|negative regulation of catalytic activity	GO:0004252|serine-type endopeptidase activity GO:0042802|identical protein binding	GO:0005618|cell wall GO:0005737|cytoplasm GO:0005777|peroxisome
pt2_00388	A	A1S	Potri.001G002300	Potri.001G002300(AS)	POPTR_0001s03960	sp|Q9FM85|Y5564_ARATH	Probable receptor-like protein kinase At5g56460 OS=Arabidopsis thaliana GN=At5g56460 PE=1 SV=1	AT5G56460.1	| Symbols: | Protein kinase superfamily protein | chr5:22865509-22867866 FORWARD LENGTH=408	LOC_Os03g06330.1	protein|tyrosine protein kinase domain containing protein, putative, expressed	IMGA|Medtr1g015020.1	Protein kinase 2B chr1 4061824-4059575 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006499|N-terminal protein myristoylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_00389	A	A1S	Potri.001G002400	Potri.001G002400(AS)	POPTR_0001s03970	NA	NA	NA	NA	LOC_Os03g45450.1	protein|WRKY60, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0009867|jasmonic acid mediated signaling pathway GO:0042742|defense response to bacterium GO:0050832|defense response to fungus	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_00390	A	A2S	Potri.001G002500	Potri.001G002500(AS) Potri.003G222400(DS)	POPTR_0001s03980	sp|Q9LJE4|CPNB2_ARATH	Chaperonin 60 subunit beta 2, chloroplastic OS=Arabidopsis thaliana GN=CPN60B2 PE=1 SV=1	AT3G13470.1	| Symbols: | TCP-1/cpn60 chaperonin family protein | chr3:4389685-4392624 FORWARD LENGTH=596	LOC_Os06g02380.2	protein|T-complex protein, putative, expressed	IMGA|Medtr1g090130.1	Chaperonin CPN60-2 chr1 24825922-24820135 F EGN_Mt100125 20111014	GO:0006457|protein folding GO:0009658|chloroplast organization GO:0042026|protein refolding GO:0044267|cellular protein metabolic process GO:0048481|ovule development	GO:0005524|ATP binding	GO:0005634|nucleus GO:0005730|nucleolus GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope GO:0022626|cytosolic ribosome
pt2_00391	A	A2S	Potri.001G002600	Potri.001G002600(AS) Potri.003G222300(DS)	POPTR_0001s03990	sp|Q9LVC3|PUM12_ARATH	Pumilio homolog 12 OS=Arabidopsis thaliana GN=APUM12 PE=2 SV=2	AT5G56510.1	| Symbols: APUM12, PUM12 | pumilio 12 | chr5:22881721-22883842 FORWARD LENGTH=596	LOC_Os11g37090.1	protein|pumilio-family RNA binding repeat domain containing protein, expressed	IMGA|Medtr5g063650.1	Pumilio domain-containing protein chr5 25669388-25673667 I EGN_Mt100125 20111014	NA	GO:0003723|RNA binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_00392	A	A1S	Potri.001G002700	Potri.001G002700(AS)	POPTR_0001s04000	NA	NA	AT1G55480.1	| Symbols: ZKT | protein containing PDZ domain, a K-box domain, and a TPR region | chr1:20713822-20715351 FORWARD LENGTH=335	LOC_Os07g07540.1	protein|SHOOT1 protein, putative, expressed	NA	NA	GO:0009611|response to wounding GO:0010264|myo-inositol hexakisphosphate biosynthetic process GO:0015979|photosynthesis GO:0016117|carotenoid biosynthetic process	NA	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope
pt2_00393	A	A1S	Potri.001G002800	Potri.001G002800(AS)	POPTR_0001s04010	sp|Q50EK0|C16B2_PICSI	Cytochrome P450 716B2 OS=Picea sitchensis GN=CYP716B2 PE=2 SV=1	AT5G36110.1	| Symbols: CYP716A1 | cytochrome P450, family 716, subfamily A, polypeptide 1 | chr5:14195377-14197613 FORWARD LENGTH=477	LOC_Os07g33580.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g091760.1	Taxane 13-alpha-hydroxylase chr5 39004461-39002697 H EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005576|extracellular region
pt2_00394	A	A1S	Potri.001G003000	Potri.001G003000(AS)	POPTR_0001s04020	sp|Q50EK0|C16B2_PICSI	Cytochrome P450 716B2 OS=Picea sitchensis GN=CYP716B2 PE=2 SV=1	AT5G36110.1	| Symbols: CYP716A1 | cytochrome P450, family 716, subfamily A, polypeptide 1 | chr5:14195377-14197613 FORWARD LENGTH=477	LOC_Os07g33620.1	protein|cytochrome P450 domain containing protein, expressed	IMGA|Medtr5g092150.1	Taxane 13-alpha-hydroxylase chr5 39206359-39203675 E EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005576|extracellular region
pt2_00395	A	A1S	Potri.001G003100	Potri.001G003100(AS)	POPTR_0001s04030	sp|Q50EK0|C16B2_PICSI	Cytochrome P450 716B2 OS=Picea sitchensis GN=CYP716B2 PE=2 SV=1	AT5G36110.1	| Symbols: CYP716A1 | cytochrome P450, family 716, subfamily A, polypeptide 1 | chr5:14195377-14197613 FORWARD LENGTH=477	LOC_Os07g33620.1	protein|cytochrome P450 domain containing protein, expressed	IMGA|Medtr5g092150.1	Taxane 13-alpha-hydroxylase chr5 39206359-39203675 E EGN_Mt100125 20111014	GO:0006569|tryptophan catabolic process GO:0009684|indoleacetic acid biosynthetic process GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005576|extracellular region
pt2_00396	A	A1S	Potri.001G003200	Potri.001G003200(AS)	POPTR_0001s04040	sp|Q8VZG8|Y4885_ARATH	Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=1 SV=3	AT4G04220.1	| Symbols: AtRLP46, RLP46 | receptor like protein 46 | chr4:2033427-2035946 FORWARD LENGTH=811	LOC_Os02g06600.1	protein|receptor-like protein kinase 2 precursor, putative, expressed	IMGA|Medtr1g039220.1	Receptor protein kinase-like protein chr1 10530698-10534277 H EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0006355|regulation of transcription, DNA-dependent GO:0006612|protein targeting to membrane GO:0006952|defense response GO:0007165|signal transduction GO:0009617|response to bacterium GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0031348|negative regulation of defense response GO:0035304|regulation of protein dephosphorylation	GO:0016301|kinase activity	GO:0005886|plasma membrane
pt2_00397	A	A1S	Potri.001G003300	Potri.001G003300(AS)	POPTR_0001s04050	NA	NA	AT3G13480.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55475.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr3:4393184-4393848 REVERSE LENGTH=172	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00398	A	A1S	Potri.001G003400	Potri.001G003400(AS)	POPTR_0001s04060	NA	NA	AT4G09830.1	| Symbols: | Uncharacterised conserved protein UCP009193 | chr4:6188866-6190591 FORWARD LENGTH=191	LOC_Os09g19640.1	protein|holocarboxylase synthetase, putative, expressed	IMGA|Medtr1g106890.1	hypothetical protein chr1 31497001-31491671 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00399	A	A1S	Potri.001G003500	Potri.001G003500(AS)	POPTR_0001s04070	NA	NA	AT5G56520.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55365.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:22885226-22885531 FORWARD LENGTH=101	NA	NA	NA	NA	GO:0006661|phosphatidylinositol biosynthetic process GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00400	A	A2S	Potri.001G003600	Potri.001G003600(AS) Potri.003G221400(DS)	POPTR_0001s04080	sp|P74003|PRMC_SYNY3	Release factor glutamine methyltransferase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=prmC PE=3 SV=1	AT5G64150.1	| Symbols: | RNA methyltransferase family protein | chr5:25668997-25670731 REVERSE LENGTH=377	LOC_Os12g41830.1	protein|Methyltransferase small domain containing protein, expressed	NA	NA	GO:0006479|protein methylation GO:0006783|heme biosynthetic process GO:0032259|methylation	GO:0003676|nucleic acid binding GO:0003824|catalytic activity GO:0008168|methyltransferase activity GO:0008276|protein methyltransferase activity	GO:0009507|chloroplast
pt2_00401	A	A1S	Potri.001G003700	Potri.001G003700(AS)	POPTR_0001s04090	sp|Q2T9S3|RPC6_BOVIN	DNA-directed RNA polymerase III subunit RPC6 OS=Bos taurus GN=POLR3F PE=2 SV=1	AT5G23710.1	| Symbols: | DNA binding;DNA-directed RNA polymerases | chr5:7996528-7997220 REVERSE LENGTH=230	LOC_Os06g40110.1	protein|RNA polymerase Rpc34 subunit family protein, expressed	NA	NA	GO:0006351|transcription, DNA-dependent	GO:0003677|DNA binding GO:0003899|DNA-directed RNA polymerase activity	GO:0005634|nucleus GO:0009507|chloroplast
pt2_00402	A	A1S	Potri.001G003800	Potri.001G003800(AS)	POPTR_0001s04100	NA	NA	AT1G55360.1	| Symbols: | Protein of Unknown Function (DUF239) | chr1:20666526-20668502 REVERSE LENGTH=422	LOC_Os07g38590.1	protein|carboxyl-terminal peptidase, putative, expressed	IMGA|Medtr1g079730.1	hypothetical protein chr1 19938198-19941909 E EGN_Mt100125 20111014	GO:0008150|biological_process GO:0019344|cysteine biosynthetic process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005576|extracellular region
pt2_00403	A	A2S	Potri.001G003900	Potri.001G003900(AS) Potri.003G221100(BS)	POPTR_0001s04110	sp|O35920|CAN9_RAT	Calpain-9 (Fragment) OS=Rattus norvegicus GN=Capn9 PE=2 SV=1	AT1G55350.4	| Symbols: DEK1, ATDEK1 | calpain-type cysteine protease family | chr1:20654463-20664501 REVERSE LENGTH=2151	LOC_Os02g47970.1	protein|calpain, putative, expressed	NA	NA	GO:0001708|cell fate specification GO:0007062|sister chromatid cohesion GO:0007155|cell adhesion GO:0009793|embryo development ending in seed dormancy GO:0009880|embryonic pattern specification GO:0010072|primary shoot apical meristem specification GO:0010090|trichome morphogenesis GO:0010228|vegetative to reproductive phase transition of meristem GO:0010431|seed maturation GO:0040014|regulation of multicellular organism growth GO:0045010|actin nucleation GO:0045595|regulation of cell differentiation GO:0048765|root hair cell differentiation GO:0071555|cell wall organization	GO:0004197|cysteine-type endopeptidase activity	GO:0005737|cytoplasm GO:0005783|endoplasmic reticulum GO:0005886|plasma membrane
pt2_00404	A	A1S	Potri.001G004000	Potri.001G004000(AS)	POPTR_0001s04120	NA	NA	AT1G55340.1	| Symbols: | Protein of unknown function (DUF1639) | chr1:20652605-20653469 FORWARD LENGTH=205	LOC_Os03g59250.1	protein|expressed protein	IMGA|Medtr5g056110.1	hypothetical protein chr5 22586762-22585938 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00405	A	A1S	Potri.001G004100	Potri.001G004100(AS)	POPTR_0001s04130	NA	NA	NA	NA	NA	NA	NA	NA	GO:0048767|root hair elongation	GO:0005515|protein binding	GO:0005886|plasma membrane GO:0031225|anchored to membrane
pt2_00406	A	A1S	Potri.001G004200	Potri.001G004200(AS)	POPTR_0001s04140	sp|F4I096|MED13_ARATH	Mediator of RNA polymerase II transcription subunit 13 OS=Arabidopsis thaliana GN=MED13 PE=1 SV=1	AT1G55325.2	| Symbols: GCT | RNA polymerase II transcription mediators | chr1:20637594-20647714 FORWARD LENGTH=2001	LOC_Os05g37500.1	protein|expressed protein	NA	NA	GO:0006357|regulation of transcription from RNA polymerase II promoter GO:0040034|regulation of development, heterochronic GO:0090213|regulation of radial pattern formation	GO:0001104|RNA polymerase II transcription cofactor activity	GO:0005634|nucleus GO:0016592|mediator complex
pt2_00407	A	A1S	Potri.001G004300	Potri.001G004300(AS)	POPTR_0001s04150	sp|Q2G6X5|EFP_NOVAD	Elongation factor P OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=efp PE=3 SV=1	AT4G26310.1	| Symbols: | elongation factor P (EF-P) family protein | chr4:13314006-13316066 REVERSE LENGTH=258	LOC_Os03g59160.1	protein|elongation factor P, putative, expressed	NA	NA	GO:0006414|translational elongation GO:0043043|peptide biosynthetic process	GO:0003746|translation elongation factor activity	GO:0005737|cytoplasm GO:0009507|chloroplast
pt2_00408	A	A1S	Potri.001G004400	Potri.001G004400(AS)	POPTR_0001s04160	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00409	A	A1S	Potri.001G004500	Potri.001G004500(AS)	POPTR_0001s04170	sp|Q9CR62|M2OM_MOUSE	Mitochondrial 2-oxoglutarate/malate carrier protein OS=Mus musculus GN=Slc25a11 PE=1 SV=3	AT5G19760.1	| Symbols: | Mitochondrial substrate carrier family protein | chr5:6679591-6681845 REVERSE LENGTH=298	LOC_Os05g11780.1	protein|mitochondrial carrier protein, putative, expressed	IMGA|Medtr5g032420.1	Mitochondrial 2-oxoglutarate/malate carrier protein chr5 13491772-13493235 F EGN_Mt100125 20111014	GO:0006007|glucose catabolic process GO:0006096|glycolysis GO:0006810|transport GO:0006835|dicarboxylic acid transport GO:0006839|mitochondrial transport GO:0009060|aerobic respiration GO:0035674|tricarboxylic acid transmembrane transport GO:0046686|response to cadmium ion GO:0055085|transmembrane transport	GO:0005310|dicarboxylic acid transmembrane transporter activity GO:0015142|tricarboxylic acid transmembrane transporter activity GO:0017077|oxidative phosphorylation uncoupler activity	GO:0005618|cell wall GO:0005739|mitochondrion GO:0005743|mitochondrial inner membrane GO:0005774|vacuolar membrane GO:0009506|plasmodesma GO:0009507|chloroplast GO:0009941|chloroplast envelope
pt2_00410	A	A1S	Potri.001G004600	Potri.001G004600(AS)	POPTR_0001s04180	sp|P33627|TBA6_MAIZE	Tubulin alpha-6 chain OS=Zea mays GN=TUBA6 PE=2 SV=1	AT5G19780.1	| Symbols: TUA5 | tubulin alpha-5 | chr5:6687212-6688926 FORWARD LENGTH=450	LOC_Os07g38730.1	protein|tubulin/FtsZ domain containing protein, putative, expressed	IMGA|contig_76569_1.1	Tubulin alpha-7 chain contig_76569 5816-1428 H PREDN 20111014	GO:0006184|GTP catabolic process GO:0051258|protein polymerization GO:0071258|cellular response to gravity	GO:0003924|GTPase activity GO:0005198|structural molecule activity GO:0005200|structural constituent of cytoskeleton GO:0005525|GTP binding	GO:0005618|cell wall GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0045298|tubulin complex GO:0048046|apoplast
pt2_00411	A	A1S	Potri.001G004700	Potri.001G004700(AS)	POPTR_0001s04190	sp|Q6J9S1|RA211_ARATH	Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana GN=RAP2-11 PE=2 SV=1	AT5G19790.1	| Symbols: RAP2.11 | related to AP2 11 | chr5:6689271-6690032 REVERSE LENGTH=253	LOC_Os07g10410.1	protein|AP2 domain containing protein, expressed	IMGA|contig_81134_1.1	Ethylene responsive transcription factor 2b contig_81134 2959-3876 H PREDN 20111014	GO:0000302|response to reactive oxygen species GO:0009723|response to ethylene stimulus GO:0035865|cellular response to potassium ion GO:0048528|post-embryonic root development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_00412	A	A2S	Potri.001G004800	Potri.001G004800(AS) Potri.003G220100(DS)	POPTR_0001s04200	sp|Q8BKC5|IPO5_MOUSE	Importin-5 OS=Mus musculus GN=Ipo5 PE=1 SV=3	AT5G19820.1	| Symbols: emb2734 | ARM repeat superfamily protein | chr5:6695731-6701247 REVERSE LENGTH=1116	LOC_Os07g38760.1	protein|HEAT repeat family protein, putative, expressed	NA	NA	GO:0009165|nucleotide biosynthetic process GO:0009793|embryo development ending in seed dormancy GO:0052541|plant-type cell wall cellulose metabolic process GO:0052546|cell wall pectin metabolic process	GO:0016829|lyase activity	GO:0005618|cell wall GO:0005829|cytosol GO:0030089|phycobilisome
pt2_00413	A	A1S	Potri.001G004900	Potri.001G004900(AS)	POPTR_0001s04210	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00414	G	G1	NA	NA	POPTR_0001s04220	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00415	A	A1S	Potri.001G005000	Potri.001G005000(AS)	POPTR_0001s04230	sp|Q6NLS8|PTHM_ARATH	Peptidyl-tRNA hydrolase, mitochondrial OS=Arabidopsis thaliana GN=At5g19830 PE=2 SV=1	AT5G19830.1	| Symbols: | Peptidyl-tRNA hydrolase family protein | chr5:6703383-6705125 FORWARD LENGTH=219	LOC_Os03g22610.2	protein|peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed	NA	NA	GO:0006412|translation GO:0006783|heme biosynthetic process	GO:0004045|aminoacyl-tRNA hydrolase activity	GO:0005739|mitochondrion
pt2_00416	A	A1S	Potri.001G005000	Potri.001G005000(AS)	POPTR_0001s04230	sp|Q6NLS8|PTHM_ARATH	Peptidyl-tRNA hydrolase, mitochondrial OS=Arabidopsis thaliana GN=At5g19830 PE=2 SV=1	AT5G19830.1	| Symbols: | Peptidyl-tRNA hydrolase family protein | chr5:6703383-6705125 FORWARD LENGTH=219	LOC_Os03g22610.2	protein|peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed	NA	NA	GO:0006412|translation GO:0006783|heme biosynthetic process	GO:0004045|aminoacyl-tRNA hydrolase activity	GO:0005739|mitochondrion
pt2_00417	A	A1S	Potri.001G005000	Potri.001G005000(AS)	POPTR_0001s04230	sp|Q6NLS8|PTHM_ARATH	Peptidyl-tRNA hydrolase, mitochondrial OS=Arabidopsis thaliana GN=At5g19830 PE=2 SV=1	AT5G19830.1	| Symbols: | Peptidyl-tRNA hydrolase family protein | chr5:6703383-6705125 FORWARD LENGTH=219	LOC_Os03g22610.2	protein|peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed	NA	NA	GO:0006412|translation GO:0006783|heme biosynthetic process	GO:0004045|aminoacyl-tRNA hydrolase activity	GO:0005739|mitochondrion
pt2_00418	A	A1S	Potri.001G005100	Potri.001G005100(AS)	POPTR_0001s04240	sp|Q38850|MYB5_ARATH	Transcription repressor MYB5 OS=Arabidopsis thaliana GN=MYB5 PE=1 SV=1	AT3G13540.1	| Symbols: ATMYB5, MYB5 | myb domain protein 5 | chr3:4420239-4421443 FORWARD LENGTH=249	LOC_Os01g50110.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr5g078140.1	P-type R2R3 Myb protein chr5 32379000-32381283 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009845|seed germination GO:0010026|trichome differentiation GO:0010090|trichome morphogenesis GO:0010214|seed coat development GO:0010468|regulation of gene expression GO:0048354|mucilage biosynthetic process involved in seed coat development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00419	A	A1S	Potri.001G005300	Potri.001G005300(AS)	POPTR_0001s04250	NA	NA	NA	NA	NA	NA	NA	NA	NA	GO:0016787|hydrolase activity	GO:0005737|cytoplasm
pt2_00420	A	A1S	Potri.001G005400	Potri.001G005400(AS)	POPTR_0001s04260	sp|Q84MC2|LOG8_ARATH	Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8 OS=Arabidopsis thaliana GN=LOG8 PE=1 SV=1	AT5G11950.2	| Symbols: | Putative lysine decarboxylase family protein | chr5:3855072-3856815 FORWARD LENGTH=216	LOC_Os01g51210.1	protein|uncharacterized protein PA4923, putative, expressed	NA	NA	GO:0009089|lysine biosynthetic process via diaminopimelate	GO:0042803|protein homodimerization activity	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol
pt2_00421	A	A1S	Potri.001G005500	Potri.001G005500(AS)	POPTR_0001s04270	NA	NA	AT4G08810.1	| Symbols: SUB1 | calcium ion binding | chr4:5616204-5617862 REVERSE LENGTH=552	LOC_Os07g43990.1	protein|expressed protein	IMGA|Medtr5g069410.1	hypothetical protein chr5 28434207-28436398 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0005509|calcium ion binding GO:0016757|transferase activity, transferring glycosyl groups	GO:0005794|Golgi apparatus GO:0042175|nuclear outer membrane-endoplasmic reticulum membrane network
pt2_00422	A	A1S	Potri.001G005600	Potri.001G005600(AS)	POPTR_0001s04280	NA	NA	AT3G13600.1	| Symbols: | calmodulin-binding family protein | chr3:4445102-4447383 FORWARD LENGTH=605	LOC_Os10g27170.1	protein|calmodulin-binding protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0005516|calmodulin binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00423	G	G2	NA	NA	POPTR_0001s04290	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00424	A	A1S	Potri.001G005700	Potri.001G005700(AS)	POPTR_0001s04290	sp|Q8W496|PTC52_ARATH	Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidopsis thaliana GN=PTC52 PE=2 SV=1	AT4G25650.1	| Symbols: ACD1-LIKE, PTC52, TIC55-IV | ACD1-like | chr4:13081021-13083153 REVERSE LENGTH=536	LOC_Os03g59110.1	protein|pheophorbide a oxygenase, chloroplast precursor, putative, expressed	NA	NA	GO:0055114|oxidation-reduction process	GO:0009055|electron carrier activity GO:0010277|chlorophyllide a oxygenase [overall] activity GO:0016491|oxidoreductase activity GO:0051537|2 iron, 2 sulfur cluster binding	GO:0009507|chloroplast GO:0009536|plastid GO:0009941|chloroplast envelope
pt2_00425	A	A2S	Potri.001G005700	Potri.001G005700(AS) Potri.001G005900(DS)	POPTR_0001s04290	sp|Q8W496|PTC52_ARATH	Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidopsis thaliana GN=PTC52 PE=2 SV=1	AT4G25650.1	| Symbols: ACD1-LIKE, PTC52, TIC55-IV | ACD1-like | chr4:13081021-13083153 REVERSE LENGTH=536	LOC_Os03g59110.1	protein|pheophorbide a oxygenase, chloroplast precursor, putative, expressed	NA	NA	GO:0055114|oxidation-reduction process	GO:0009055|electron carrier activity GO:0010277|chlorophyllide a oxygenase [overall] activity GO:0016491|oxidoreductase activity GO:0051537|2 iron, 2 sulfur cluster binding	GO:0009507|chloroplast GO:0009536|plastid GO:0009941|chloroplast envelope
pt2_00426	A	A1S	Potri.001G005800	Potri.001G005800(AS)	POPTR_0001s04300	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00427	A	A1S	Potri.001G005900	Potri.001G005900(AS)	POPTR_0001s04310	sp|Q8W496|PTC52_ARATH	Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidopsis thaliana GN=PTC52 PE=2 SV=1	AT4G25650.1	| Symbols: ACD1-LIKE, PTC52, TIC55-IV | ACD1-like | chr4:13081021-13083153 REVERSE LENGTH=536	LOC_Os03g59110.1	protein|pheophorbide a oxygenase, chloroplast precursor, putative, expressed	NA	NA	GO:0055114|oxidation-reduction process	GO:0009055|electron carrier activity GO:0010277|chlorophyllide a oxygenase [overall] activity GO:0016491|oxidoreductase activity GO:0051537|2 iron, 2 sulfur cluster binding	GO:0009507|chloroplast GO:0009536|plastid GO:0009941|chloroplast envelope
pt2_00428	C	C1S	Potri.001G006000	Potri.001G006000(CS)	sp|Q682H0|HA22F_ARATH	HVA22-like protein f OS=Arabidopsis thaliana GN=HVA22F PE=2 SV=1	AT2G42820.1	| Symbols: HVA22F | HVA22-like protein F | chr2:17817460-17818301 REVERSE LENGTH=158	LOC_Os01g52780.1	protein|HVA22, putative, expressed	IMGA|Medtr5g091800.1	HVA22-like protein f chr5 39023425-39024753 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_00429	A	A1S	Potri.001G006200	Potri.001G006200(AS)	POPTR_0001s04330	NA	NA	AT3G13600.1	| Symbols: | calmodulin-binding family protein | chr3:4445102-4447383 FORWARD LENGTH=605	LOC_Os07g43970.1	protein|calmodulin-binding protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0005516|calmodulin binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00430	A	A2S	Potri.001G006300	Potri.001G006300(AS) Potri.003G218700(DS)	POPTR_0001s04340	sp|Q9R1C0|TAF7_MOUSE	Transcription initiation factor TFIID subunit 7 OS=Mus musculus GN=Taf7 PE=1 SV=1	AT1G55300.1	| Symbols: TAF7 | TBP-associated factor 7 | chr1:20628170-20629490 REVERSE LENGTH=203	LOC_Os05g28010.1	protein|TATA-binding protein-associated factor TAFII55 family protein, putative, expressed	NA	NA	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0006366|transcription from RNA polymerase II promoter GO:0006367|transcription initiation from RNA polymerase II promoter	NA	GO:0005634|nucleus GO:0005669|transcription factor TFIID complex
pt2_00431	A	A1S	Potri.001G006400	Potri.001G006400(AS)	POPTR_0001s04350	NA	NA	AT3G13570.1	| Symbols: SCL30A, At-SCL30A | SC35-like splicing factor 30A | chr3:4429564-4431602 REVERSE LENGTH=262	LOC_Os07g43950.1	protein|RNA recognition motif containing protein, putative, expressed	IMGA|Medtr5g079870.1	"Splicing factor, arginine/serine-rich 13A" chr5 33148550-33152544 E EGN_Mt100125 20111014	GO:0000398|mRNA splicing, via spliceosome GO:0006355|regulation of transcription, DNA-dependent GO:0006396|RNA processing GO:0008380|RNA splicing GO:0030422|production of siRNA involved in RNA interference GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0043687|post-translational protein modification GO:0045893|positive regulation of transcription, DNA-dependent	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding GO:0005515|protein binding GO:0042802|identical protein binding	GO:0005634|nucleus GO:0005730|nucleolus GO:0005829|cytosol GO:0005886|plasma membrane GO:0016607|nuclear speck GO:0035061|interchromatin granule
pt2_00432	A	A1S	Potri.001G006500	Potri.001G006500(AS)	POPTR_0001s04360	sp|Q94CD8|E134_ARATH	Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana GN=At3g13560 PE=1 SV=1	AT3G13560.2	| Symbols: | O-Glycosyl hydrolases family 17 protein | chr3:4425484-4427284 REVERSE LENGTH=505	LOC_Os07g38930.2	protein|glucan endo-1,3-beta-glucosidase precursor, putative, expressed	IMGA|Medtr5g078200.1	"Glucan endo-1,3-beta-glucosidase" chr5 32414043-32418084 E EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0043169|cation binding	GO:0005886|plasma membrane GO:0031225|anchored to membrane GO:0046658|anchored to plasma membrane
pt2_00433	A	A1S	Potri.001G006600	Potri.001G006600(AS)	POPTR_0001s04370	sp|Q84P17|AEE18_ARATH	Probable acyl-activating enzyme 18, peroxisomal OS=Arabidopsis thaliana GN=AAE18 PE=2 SV=1	AT1G55320.1	| Symbols: AAE18 | acyl-activating enzyme 18 | chr1:20633371-20636659 FORWARD LENGTH=727	LOC_Os03g59080.1	protein|AMP-binding enzyme, putative, expressed	NA	NA	GO:0008152|metabolic process GO:0009850|auxin metabolic process	GO:0003824|catalytic activity GO:0016874|ligase activity	GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0005777|peroxisome
pt2_00434	A	A1S	Potri.001G006700	Potri.001G006700(AS)	POPTR_0001s04380	sp|Q84P17|AEE18_ARATH	Probable acyl-activating enzyme 18, peroxisomal OS=Arabidopsis thaliana GN=AAE18 PE=2 SV=1	AT1G55320.1	| Symbols: AAE18 | acyl-activating enzyme 18 | chr1:20633371-20636659 FORWARD LENGTH=727	LOC_Os03g59080.1	protein|AMP-binding enzyme, putative, expressed	NA	NA	GO:0008152|metabolic process GO:0009850|auxin metabolic process	GO:0003824|catalytic activity GO:0016874|ligase activity	GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0005777|peroxisome
pt2_00435	A	A3S	Potri.001G006800	Potri.001G006800(AS) Potri.001G006900(BS) Potri.T170500(BS)	POPTR_0001s04390	sp|Q84MB3|ACCH1_ARATH	1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1	AT3G13610.1	| Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr3:4449448-4450616 FORWARD LENGTH=361	LOC_Os04g49194.1	protein|naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed	IMGA|Medtr5g055680.1	Protein SRG1 chr5 22384306-22387839 F EGN_Mt100125 20111014	GO:0009407|toxin catabolic process GO:0009611|response to wounding GO:0009805|coumarin biosynthetic process GO:0010421|hydrogen peroxide-mediated programmed cell death GO:0010583|response to cyclopentenone GO:0019748|secondary metabolic process GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors GO:0051213|dioxygenase activity	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_00436	B	B2S	Potri.001G006900	Potri.001G006900(BS) Potri.T170500(BS)	POPTR_0001s04410	sp|Q84MB3|ACCH1_ARATH	1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1	AT3G13610.1	| Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr3:4449448-4450616 FORWARD LENGTH=361	LOC_Os01g61610.3	protein|flavonol synthase/flavanone 3-hydroxylase, putative, expressed	IMGA|Medtr5g055680.1	Protein SRG1 chr5 22384306-22387839 F EGN_Mt100125 20111014	GO:0009407|toxin catabolic process GO:0009611|response to wounding GO:0009805|coumarin biosynthetic process GO:0010421|hydrogen peroxide-mediated programmed cell death GO:0010583|response to cyclopentenone GO:0019748|secondary metabolic process GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors GO:0051213|dioxygenase activity	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_00437	A	A1S	Potri.001G007000	Potri.001G007000(AS)	POPTR_0001s04420	sp|Q9LMR5|FK126_ARATH	F-box/kelch-repeat protein At1g15670 OS=Arabidopsis thaliana GN=At1g15670 PE=2 SV=1	AT1G15670.1	| Symbols: | Galactose oxidase/kelch repeat superfamily protein | chr1:5390119-5391198 FORWARD LENGTH=359	LOC_Os06g39370.1	protein|OsFBK16 - F-box domain and kelch repeat containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00438	A	A1S	Potri.001G007100	Potri.001G007100(AS)	POPTR_0001s04430	sp|Q84MB3|ACCH1_ARATH	1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1	AT1G55290.1	| Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr1:20626208-20627397 REVERSE LENGTH=361	LOC_Os01g61610.3	protein|flavonol synthase/flavanone 3-hydroxylase, putative, expressed	IMGA|Medtr5g055680.1	Protein SRG1 chr5 22384306-22387839 F EGN_Mt100125 20111014	GO:0008150|biological_process GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_00439	A	A1S	Potri.001G007200	Potri.001G007200(AS)	POPTR_0001s04440	NA	NA	AT3G13620.1	| Symbols: | Amino acid permease family protein | chr3:4450904-4452556 REVERSE LENGTH=478	LOC_Os03g25920.1	protein|amino acid permease family protein, putative, expressed	IMGA|Medtr5g064750.1	Neutral amino acid transport protein chr5 26211480-26209932 F EGN_Mt100125 20111014	GO:0015846|polyamine transport GO:0016126|sterol biosynthetic process GO:0046520|sphingoid biosynthetic process	GO:0015203|polyamine transmembrane transporter activity GO:0015326|cationic amino acid transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_00440	A	A1S	Potri.001G007300	Potri.001G007300(AS)	POPTR_0001s04450	NA	NA	AT3G13620.1	| Symbols: | Amino acid permease family protein | chr3:4450904-4452556 REVERSE LENGTH=478	LOC_Os03g25920.1	protein|amino acid permease family protein, putative, expressed	IMGA|Medtr5g064750.1	Neutral amino acid transport protein chr5 26211480-26209932 F EGN_Mt100125 20111014	GO:0015846|polyamine transport GO:0016126|sterol biosynthetic process GO:0046520|sphingoid biosynthetic process	GO:0015203|polyamine transmembrane transporter activity GO:0015326|cationic amino acid transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_00441	A	A1S	Potri.001G007400	Potri.001G007400(AS)	POPTR_0001s04460	sp|Q9C8G4|PLY4_ARATH	Probable pectate lyase 4 OS=Arabidopsis thaliana GN=At1g30350 PE=2 SV=1	AT5G09280.1	| Symbols: | Pectin lyase-like superfamily protein | chr5:2880423-2881597 REVERSE LENGTH=297	LOC_Os08g18970.1	protein|pectate lyase family protein, expressed	IMGA|Medtr5g019160.1	Major pollen allergen-like protein chr5 6982688-6984373 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0016829|lyase activity GO:0030570|pectate lyase activity	GO:0005886|plasma membrane
pt2_00442	G	G1	NA	NA	POPTR_0001s04470	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00443	A	A1S	Potri.001G007600	Potri.001G007600(AS)	POPTR_0001s04480	sp|P37273|PSY2_SOLLC	Phytoene synthase 2, chloroplastic (Fragment) OS=Solanum lycopersicum GN=PSY2 PE=2 SV=1	AT5G17230.2	| Symbols: PSY | PHYTOENE SYNTHASE | chr5:5659839-5662087 REVERSE LENGTH=422	LOC_Os12g43130.1	protein|phytoene synthase, chloroplast precursor, putative, expressed	IMGA|contig_85152_1.1	Phytoene synthase protein contig_85152 2290-1403 E PREDN 20111014	GO:0006636|unsaturated fatty acid biosynthetic process GO:0006655|phosphatidylglycerol biosynthetic process GO:0009058|biosynthetic process GO:0015995|chlorophyll biosynthetic process GO:0016117|carotenoid biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway	GO:0016740|transferase activity GO:0016765|transferase activity, transferring alkyl or aryl (other than methyl) groups GO:0016767|geranylgeranyl-diphosphate geranylgeranyltransferase activity GO:0046905|phytoene synthase activity	GO:0009507|chloroplast GO:0010287|plastoglobule
pt2_00444	B	B1S	Potri.001G007700	Potri.001G007700(BS)	POPTR_0001s04490	sp|P53797|PSY_NARPS	Phytoene synthase, chloroplastic OS=Narcissus pseudonarcissus GN=PSY PE=2 SV=1	AT5G17230.2	| Symbols: PSY | PHYTOENE SYNTHASE | chr5:5659839-5662087 REVERSE LENGTH=422	LOC_Os06g51290.2	protein|phytoene synthase, chloroplast precursor, putative, expressed	IMGA|Medtr5g076620.1	Phytoene synthase chr5 31690087-31686764 F EGN_Mt100125 20111014	GO:0006636|unsaturated fatty acid biosynthetic process GO:0006655|phosphatidylglycerol biosynthetic process GO:0009058|biosynthetic process GO:0015995|chlorophyll biosynthetic process GO:0016117|carotenoid biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway	GO:0016740|transferase activity GO:0016765|transferase activity, transferring alkyl or aryl (other than methyl) groups GO:0016767|geranylgeranyl-diphosphate geranylgeranyltransferase activity GO:0046905|phytoene synthase activity	GO:0009507|chloroplast GO:0010287|plastoglobule
pt2_00445	A	A1S	Potri.001G007800	Potri.001G007800(AS)	POPTR_0001s04500	sp|Q07100|PP2A4_ARATH	Serine/threonine-protein phosphatase PP2A-4 catalytic subunit OS=Arabidopsis thaliana GN=PP2A4 PE=2 SV=2	AT2G42500.1	| Symbols: PP2A-3 | protein phosphatase 2A-3 | chr2:17698099-17701226 REVERSE LENGTH=313	LOC_Os03g59060.2	protein|OsPP2Ac-2 - Phosphatase 2A isoform 2 belonging to family 2, expressed	IMGA|Medtr5g037200.1	Serine/threonine protein phosphatase chr5 15803326-15807834 F EGN_Mt100125 20111014	NA	GO:0004722|protein serine/threonine phosphatase activity GO:0016787|hydrolase activity	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane
pt2_00446	A	A1S	Potri.001G007900	Potri.001G007900(AS)	POPTR_0001s04510	sp|Q84W89|RH37_ARATH	DEAD-box ATP-dependent RNA helicase 37 OS=Arabidopsis thaliana GN=RH37 PE=2 SV=2	AT2G42520.1	| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr2:17705382-17708744 FORWARD LENGTH=633	LOC_Os03g59050.1	protein|DEAD-box ATP-dependent RNA helicase, putative, expressed	IMGA|contig_74166_1.1	ATP dependent RNA helicase contig_74166 1-4555 F PREDN 20111014	NA	GO:0003676|nucleic acid binding GO:0004386|helicase activity GO:0005524|ATP binding GO:0008026|ATP-dependent helicase activity	GO:0005777|peroxisome
pt2_00447	A	A2S	Potri.001G008000	Potri.001G008000(AS) Potri.003G217700(DS)	POPTR_0001s04520	sp|Q93W93|FBK22_ARATH	F-box/kelch-repeat protein At1g55270 OS=Arabidopsis thaliana GN=At1g55270 PE=2 SV=1	AT1G55270.1	| Symbols: | Galactose oxidase/kelch repeat superfamily protein | chr1:20618333-20619925 REVERSE LENGTH=434	LOC_Os10g26990.1	protein|OsFBK23 - F-box domain and kelch repeat containing protein, expressed	IMGA|Medtr5g039390.1	F-box/kelch-repeat protein SKIP11 chr5 16927948-16931013 F EGN_Mt100125 20111014	NA	GO:0003674|molecular_function	GO:0005737|cytoplasm
pt2_00448	A	A2S	Potri.001G008000	Potri.001G008000(AS) Potri.T156800(AS)	POPTR_0001s04530	sp|Q93W93|FBK22_ARATH	F-box/kelch-repeat protein At1g55270 OS=Arabidopsis thaliana GN=At1g55270 PE=2 SV=1	AT1G55270.1	| Symbols: | Galactose oxidase/kelch repeat superfamily protein | chr1:20618333-20619925 REVERSE LENGTH=434	LOC_Os10g26990.1	protein|OsFBK23 - F-box domain and kelch repeat containing protein, expressed	IMGA|Medtr5g039390.1	F-box/kelch-repeat protein SKIP11 chr5 16927948-16931013 F EGN_Mt100125 20111014	NA	GO:0003674|molecular_function	GO:0005737|cytoplasm
pt2_00449	A	A2S	Potri.001G008100	Potri.001G008100(AS) Potri.T156900(AS)	POPTR_0001s04540	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process GO:0030003|cellular cation homeostasis GO:0070838|divalent metal ion transport	GO:0003674|molecular_function	NA
pt2_00450	A	A2S	Potri.001G008200	Potri.001G008200(AS) Potri.T157000(BS)	POPTR_0001s04550	NA	NA	NA	NA	NA	NA	NA	NA	GO:0009737|response to abscisic acid stimulus	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_00451	A	A3S	Potri.T157100	Potri.T157100(AS) Potri.001G008300(AS) Potri.003G217300(DS)	POPTR_0001s04560	NA	NA	AT1G55265.1	| Symbols: | Protein of unknown function, DUF538 | chr1:20617326-20617853 FORWARD LENGTH=175	LOC_Os03g48626.1	protein|expressed protein	IMGA|contig_24614_1.1	Unknown protein contig_24614 653-186 H PREDN 20111014	GO:0008150|biological_process	NA	GO:0005576|extracellular region GO:0005773|vacuole
pt2_00452	A	A1S	Potri.T157400	Potri.T157400(AS)	POPTR_0001s04570	NA	NA	AT1G55265.1	| Symbols: | Protein of unknown function, DUF538 | chr1:20617326-20617853 FORWARD LENGTH=175	LOC_Os03g48626.1	protein|expressed protein	IMGA|contig_24614_1.1	Unknown protein contig_24614 653-186 H PREDN 20111014	GO:0008150|biological_process	NA	GO:0005576|extracellular region GO:0005773|vacuole
pt2_00453	A	A1S	Potri.001G008400	Potri.001G008400(AS)	POPTR_0001s04580	NA	NA	AT5G19860.1	| Symbols: | Protein of unknown function, DUF538 | chr5:6714533-6715837 REVERSE LENGTH=181	LOC_Os03g48710.1	protein|expressed protein	IMGA|contig_24614_1.1	Unknown protein contig_24614 653-186 H PREDN 20111014	GO:0008150|biological_process	NA	GO:0005773|vacuole GO:0009507|chloroplast
pt2_00454	A	A1S	Potri.001G008400	Potri.001G008400(AS)	POPTR_0001s04580	NA	NA	AT5G19860.1	| Symbols: | Protein of unknown function, DUF538 | chr5:6714533-6715837 REVERSE LENGTH=181	LOC_Os03g48710.1	protein|expressed protein	IMGA|contig_24614_1.1	Unknown protein contig_24614 653-186 H PREDN 20111014	GO:0008150|biological_process	NA	GO:0005773|vacuole GO:0009507|chloroplast
pt2_00455	A	A2S	Potri.001G008400	Potri.001G008400(AS) Potri.003G217200(DS)	POPTR_0001s04580	NA	NA	AT5G19860.1	| Symbols: | Protein of unknown function, DUF538 | chr5:6714533-6715837 REVERSE LENGTH=181	LOC_Os03g48710.1	protein|expressed protein	IMGA|contig_24614_1.1	Unknown protein contig_24614 653-186 H PREDN 20111014	GO:0008150|biological_process	NA	GO:0005773|vacuole GO:0009507|chloroplast
pt2_00456	A	A1S	Potri.001G008500	Potri.001G008500(AS)	POPTR_0001s04590	NA	NA	AT2G44290.1	| Symbols: | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr2:18305418-18306202 REVERSE LENGTH=205	LOC_Os03g07100.1	protein|LTPL82 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	IMGA|contig_179832_1.1	Non-specific lipid-transfer protein contig_179832 1008-250 H PREDN 20111014	GO:0000038|very long-chain fatty acid metabolic process GO:0006869|lipid transport GO:0009664|plant-type cell wall organization GO:0019344|cysteine biosynthetic process GO:0042335|cuticle development	GO:0008289|lipid binding	GO:0005634|nucleus GO:0005886|plasma membrane GO:0031225|anchored to membrane
pt2_00457	A	A1S	Potri.001G008600	Potri.001G008600(AS)	POPTR_0001s04600	NA	NA	AT1G11880.1	| Symbols: | transferases, transferring hexosyl groups | chr1:4007909-4010327 REVERSE LENGTH=489	LOC_Os12g31480.1	protein|GPI mannosyltransferase 2, putative, expressed	NA	NA	GO:0006506|GPI anchor biosynthetic process	GO:0016758|transferase activity, transferring hexosyl groups	GO:0005789|endoplasmic reticulum membrane GO:0016021|integral to membrane
pt2_00458	A	A2S	Potri.001G008700	Potri.001G008700(AS) Potri.001G008800(AA)	POPTR_0001s04610	sp|Q54BM5|BBP_DICDI	Branchpoint-bridging protein OS=Dictyostelium discoideum GN=sf1 PE=3 SV=1	AT3G32940.1	| Symbols: | RNA-binding KH domain-containing protein | chr3:13491089-13493630 REVERSE LENGTH=607	LOC_Os08g01070.2	protein|retrotransposon protein, putative, unclassified, expressed	NA	NA	NA	GO:0003723|RNA binding	GO:0005634|nucleus
pt2_00459	A	A1S	Potri.001G008800	Potri.001G008800(AS)	POPTR_0001s04620	sp|Q9C895|BRE1B_ARATH	E3 ubiquitin-protein ligase BRE1-like 2 OS=Arabidopsis thaliana GN=HUB2 PE=1 SV=2	AT1G55250.3	| Symbols: HUB2 | histone mono-ubiquitination 2 | chr1:20607214-20612302 FORWARD LENGTH=899	LOC_Os10g41590.1	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr5g084990.1	E3 ubiquitin-protein ligase BRE1-like protein chr5 35650986-35646385 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0007346|regulation of mitotic cell cycle GO:0009965|leaf morphogenesis GO:0010162|seed dormancy process GO:0010228|vegetative to reproductive phase transition of meristem GO:0010390|histone monoubiquitination GO:0033523|histone H2B ubiquitination GO:0043687|post-translational protein modification GO:0045893|positive regulation of transcription, DNA-dependent	GO:0008270|zinc ion binding GO:0042803|protein homodimerization activity	GO:0005634|nucleus
pt2_00460	A	A1S	Potri.001G008900	Potri.001G008900(AS)	POPTR_0001s04630	NA	NA	AT1G55230.1	| Symbols: | Family of unknown function (DUF716) | chr1:20602895-20603797 FORWARD LENGTH=300	LOC_Os09g27260.1	protein|plant viral response family protein, putative, expressed	IMGA|Medtr5g027180.1	Transmembrane protein 45B chr5 11024450-11020755 E EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0009507|chloroplast
pt2_00461	B	B1S	Potri.001G009000	Potri.001G009000(BS)	POPTR_0001s04640	NA	NA	AT1G55230.1	| Symbols: | Family of unknown function (DUF716) | chr1:20602895-20603797 FORWARD LENGTH=300	LOC_Os09g27260.1	protein|plant viral response family protein, putative, expressed	IMGA|Medtr5g027180.1	Transmembrane protein 45B chr5 11024450-11020755 E EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0009507|chloroplast
pt2_00462	A	A1S	Potri.001G009100	Potri.001G009100(AS)	POPTR_0001s04650	NA	NA	AT1G58170.1	| Symbols: | Disease resistance-responsive (dirigent-like protein) family protein | chr1:21536188-21536745 FORWARD LENGTH=185	LOC_Os12g07580.1	protein|dirigent, putative, expressed	IMGA|Medtr5g096120.1	Disease resistance response protein chr5 40986916-40987485 H EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0006952|defense response GO:0009807|lignan biosynthetic process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_00463	A	A1S	Potri.001G009200	Potri.001G009200(AS)	POPTR_0001s04660	NA	NA	AT5G19875.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G31940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:6718412-6718783 FORWARD LENGTH=123	NA	NA	IMGA|Medtr5g084240.1	hypothetical protein chr5 35343399-35342214 F EGN_Mt100125 20111014	GO:0006979|response to oxidative stress	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_00464	A	A1S	Potri.001G009300	Potri.001G009300(AS)	POPTR_0001s04670	NA	NA	NA	NA	NA	NA	IMGA|Medtr5g084250.1	hypothetical protein chr5 35344101-35343476 F EGN_Mt100125 20111014	GO:0006979|response to oxidative stress	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_00465	A	A1S	Potri.001G009400	Potri.001G009400(AS)	POPTR_0001s04680	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00466	A	A1S	Potri.001G009500	Potri.001G009500(AS)	POPTR_0001s04690	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00467	A	A1S	Potri.001G009600	Potri.001G009600(AS)	POPTR_0001s04700	sp|Q94F88|CMT3_ARATH	DNA (cytosine-5)-methyltransferase CMT3 OS=Arabidopsis thaliana GN=CMT3 PE=1 SV=2	AT1G69770.1	| Symbols: CMT3 | chromomethylase 3 | chr1:26248496-26253519 REVERSE LENGTH=839	LOC_Os03g12570.1	protein|expressed protein	IMGA|Medtr5g023660.1	DNA (cytosine-5)-methyltransferase chr5 9137935-9132120 E EGN_Mt100125 20111014	GO:0006260|DNA replication GO:0006261|DNA-dependent DNA replication GO:0006270|DNA replication initiation GO:0006275|regulation of DNA replication GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0006346|methylation-dependent chromatin silencing GO:0008283|cell proliferation GO:0009909|regulation of flower development GO:0010069|zygote asymmetric cytokinesis in embryo sac GO:0010425|DNA methylation on cytosine within a CNG sequence GO:0016458|gene silencing GO:0016572|histone phosphorylation GO:0031047|gene silencing by RNA GO:0031048|chromatin silencing by small RNA GO:0034968|histone lysine methylation GO:0045814|negative regulation of gene expression, epigenetic GO:0051567|histone H3-K9 methylation GO:0051726|regulation of cell cycle	GO:0003677|DNA binding GO:0003886|DNA (cytosine-5-)-methyltransferase activity	GO:0005634|nucleus
pt2_00468	A	A1S	Potri.001G009700	Potri.001G009700(AS)	POPTR_0001s04710	sp|Q6QNM1|KC1_TOXGO	Casein kinase I OS=Toxoplasma gondii PE=2 SV=1	AT3G13670.1	| Symbols: | Protein kinase family protein | chr3:4469434-4473234 FORWARD LENGTH=703	LOC_Os05g11140.2	protein|CK1_CaseinKinase_1a.5 - CK1 includes the casein kinase 1 kinases, expressed	IMGA|Medtr1g042430.1	Casein kinase chr1 12130628-12134366 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006487|protein N-linked glycosylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus
pt2_00469	A	A1S	Potri.001G009800	Potri.001G009800(AS)	POPTR_0001s04720	NA	NA	AT2G34860.2	| Symbols: EDA3 | DnaJ/Hsp40 cysteine-rich domain superfamily protein | chr2:14708380-14709804 FORWARD LENGTH=186	LOC_Os08g36140.1	protein|expressed protein	IMGA|Medtr1g116170.2	DnaJ-like zinc-finger protein chr1 33730130-33728687 F EGN_Mt100125 20111014	GO:0006098|pentose-phosphate shunt GO:0009561|megagametogenesis GO:0009902|chloroplast relocation GO:0010027|thylakoid membrane organization GO:0010304|PSII associated light-harvesting complex II catabolic process GO:0015995|chlorophyll biosynthetic process GO:0016117|carotenoid biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019684|photosynthesis, light reaction GO:0034660|ncRNA metabolic process GO:0035304|regulation of protein dephosphorylation GO:0042793|transcription from plastid promoter	GO:0031072|heat shock protein binding GO:0051082|unfolded protein binding	GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane
pt2_00470	A	A1S	Potri.001G009800	Potri.001G009800(AS)	POPTR_0001s04720	NA	NA	AT2G34860.2	| Symbols: EDA3 | DnaJ/Hsp40 cysteine-rich domain superfamily protein | chr2:14708380-14709804 FORWARD LENGTH=186	LOC_Os08g36140.1	protein|expressed protein	IMGA|Medtr1g116170.2	DnaJ-like zinc-finger protein chr1 33730130-33728687 F EGN_Mt100125 20111014	GO:0006098|pentose-phosphate shunt GO:0009561|megagametogenesis GO:0009902|chloroplast relocation GO:0010027|thylakoid membrane organization GO:0010304|PSII associated light-harvesting complex II catabolic process GO:0015995|chlorophyll biosynthetic process GO:0016117|carotenoid biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019684|photosynthesis, light reaction GO:0034660|ncRNA metabolic process GO:0035304|regulation of protein dephosphorylation GO:0042793|transcription from plastid promoter	GO:0031072|heat shock protein binding GO:0051082|unfolded protein binding	GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane
pt2_00471	A	A1S	Potri.001G009900	Potri.001G009900(AS)	POPTR_0001s04730	sp|Q10PP8|MTP4_ORYSJ	Metal tolerance protein 4 OS=Oryza sativa subsp. japonica GN=MTP4 PE=2 SV=1	AT3G58060.1	| Symbols: | Cation efflux family protein | chr3:21497778-21499676 REVERSE LENGTH=411	LOC_Os03g12530.1	protein|cation efflux family protein, putative, expressed	IMGA|Medtr5g075680.1	Metal tolerance protein chr5 31209167-31206642 E EGN_Mt100125 20111014	GO:0006812|cation transport GO:0055085|transmembrane transport	GO:0008324|cation transmembrane transporter activity GO:0015562|efflux transmembrane transporter activity	GO:0005634|nucleus GO:0016020|membrane GO:0016021|integral to membrane
pt2_00472	A	A3S	Potri.001G010000	Potri.001G010000(AS) Potri.001G010100(BS) Potri.001G010200(BS)	POPTR_0001s04740	sp|Q10PP8|MTP4_ORYSJ	Metal tolerance protein 4 OS=Oryza sativa subsp. japonica GN=MTP4 PE=2 SV=1	AT3G58060.1	| Symbols: | Cation efflux family protein | chr3:21497778-21499676 REVERSE LENGTH=411	LOC_Os03g12530.1	protein|cation efflux family protein, putative, expressed	IMGA|Medtr5g075680.1	Metal tolerance protein chr5 31209167-31206642 E EGN_Mt100125 20111014	GO:0006812|cation transport GO:0055085|transmembrane transport	GO:0008324|cation transmembrane transporter activity GO:0015562|efflux transmembrane transporter activity	GO:0005634|nucleus GO:0016020|membrane GO:0016021|integral to membrane
pt2_00473	B	B1S	Potri.001G010300	Potri.001G010300(BS)	POPTR_0001s04750	sp|Q10PP8|MTP4_ORYSJ	Metal tolerance protein 4 OS=Oryza sativa subsp. japonica GN=MTP4 PE=2 SV=1	AT3G58060.1	| Symbols: | Cation efflux family protein | chr3:21497778-21499676 REVERSE LENGTH=411	LOC_Os03g12530.1	protein|cation efflux family protein, putative, expressed	IMGA|Medtr5g075680.1	Metal tolerance protein chr5 31209167-31206642 E EGN_Mt100125 20111014	GO:0006812|cation transport GO:0055085|transmembrane transport	GO:0008324|cation transmembrane transporter activity GO:0015562|efflux transmembrane transporter activity	GO:0005634|nucleus GO:0016020|membrane GO:0016021|integral to membrane
pt2_00474	A	A1S	Potri.001G010400	Potri.001G010400(AS)	POPTR_0001s04760	sp|P54453|YQEH_BACSU	Uncharacterized protein yqeH OS=Bacillus subtilis (strain 168) GN=yqeH PE=1 SV=1	AT4G10620.1	| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr4:6564297-6566402 FORWARD LENGTH=597	LOC_Os09g19980.1	protein|GTP binding protein, putative, expressed	NA	NA	GO:0008150|biological_process GO:0042991|transcription factor import into nucleus	GO:0005525|GTP binding	GO:0005634|nucleus
pt2_00475	A	A1S	Potri.001G010500	Potri.001G010500(AS)	POPTR_0001s04770	sp|Q9M2P4|SINA2_ARATH	E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana GN=SINAT2 PE=2 SV=1	AT3G58040.1	| Symbols: SINAT2 | seven in absentia of Arabidopsis 2 | chr3:21489612-21491085 FORWARD LENGTH=308	LOC_Os02g03620.1	protein|seven in absentia protein family domain containing protein, expressed	IMGA|Medtr5g067400.1	Ubiquitin chr5 27493316-27494987 H EGN_Mt100125 20111014	GO:0006511|ubiquitin-dependent protein catabolic process GO:0007275|multicellular organismal development GO:0016567|protein ubiquitination	GO:0004842|ubiquitin-protein ligase activity GO:0005515|protein binding GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_00476	A	A1S	Potri.001G010600	Potri.001G010600(AS)	POPTR_0001s04780	NA	NA	AT2G31945.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G05575.1); Has 61 Blast hits to 61 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:13581691-13581978 FORWARD LENGTH=95	NA	NA	NA	NA	GO:0008150|biological_process GO:0009407|toxin catabolic process GO:0009693|ethylene biosynthetic process GO:0010583|response to cyclopentenone	GO:0003674|molecular_function	NA
pt2_00477	A	A1S	Potri.001G010700	Potri.001G010700(AS)	POPTR_0001s04790	sp|Q54WW7|Y0010_DICDI	Probable serine/threonine-protein kinase DDB_G0279405 OS=Dictyostelium discoideum GN=DDB_G0279405 PE=3 SV=1	AT3G45240.2	| Symbols: GRIK1 | geminivirus rep interacting kinase 1 | chr3:16570774-16572902 REVERSE LENGTH=396	LOC_Os03g50330.1	protein|CAMK_KIN1/SNF1/Nim1_like.18 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	IMGA|Medtr5g075100.1	CBL-interacting protein kinase chr5 30905699-30903734 F EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus
pt2_00478	A	A2S	Potri.001G010800	Potri.001G010800(AS) Potri.003G215100(DS)	POPTR_0001s04800	sp|Q9SPK5|FTHS_ARATH	Formate--tetrahydrofolate ligase OS=Arabidopsis thaliana GN=THFS PE=1 SV=1	AT1G50480.1	| Symbols: THFS | 10-formyltetrahydrofolate synthetase | chr1:18702064-18704687 FORWARD LENGTH=634	LOC_Os09g27420.1	protein|formate--tetrahydrofolate ligase, putative, expressed	IMGA|Medtr5g059390.1	Formate-tetrahydrofolate ligase chr5 23881433-23885633 H EGN_Mt100125 20111014	GO:0009396|folic acid-containing compound biosynthetic process GO:0046686|response to cadmium ion	GO:0004329|formate-tetrahydrofolate ligase activity GO:0005507|copper ion binding GO:0005524|ATP binding	GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane GO:0009507|chloroplast GO:0048046|apoplast
pt2_00479	B	B2S	Potri.001G010800	Potri.001G010800(BS) Potri.003G215100(DS)	POPTR_0001s04800	sp|Q9SPK5|FTHS_ARATH	Formate--tetrahydrofolate ligase OS=Arabidopsis thaliana GN=THFS PE=1 SV=1	AT1G50480.1	| Symbols: THFS | 10-formyltetrahydrofolate synthetase | chr1:18702064-18704687 FORWARD LENGTH=634	LOC_Os09g27420.1	protein|formate--tetrahydrofolate ligase, putative, expressed	IMGA|Medtr5g059390.1	Formate-tetrahydrofolate ligase chr5 23881433-23885633 H EGN_Mt100125 20111014	GO:0009396|folic acid-containing compound biosynthetic process GO:0046686|response to cadmium ion	GO:0004329|formate-tetrahydrofolate ligase activity GO:0005507|copper ion binding GO:0005524|ATP binding	GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane GO:0009507|chloroplast GO:0048046|apoplast
pt2_00480	A	A2S	Potri.001G010800	Potri.001G010800(AS) Potri.003G215100(DS)	POPTR_0001s04800	sp|Q9SPK5|FTHS_ARATH	Formate--tetrahydrofolate ligase OS=Arabidopsis thaliana GN=THFS PE=1 SV=1	AT1G50480.1	| Symbols: THFS | 10-formyltetrahydrofolate synthetase | chr1:18702064-18704687 FORWARD LENGTH=634	LOC_Os09g27420.1	protein|formate--tetrahydrofolate ligase, putative, expressed	IMGA|Medtr5g059390.1	Formate-tetrahydrofolate ligase chr5 23881433-23885633 H EGN_Mt100125 20111014	GO:0009396|folic acid-containing compound biosynthetic process GO:0046686|response to cadmium ion	GO:0004329|formate-tetrahydrofolate ligase activity GO:0005507|copper ion binding GO:0005524|ATP binding	GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane GO:0009507|chloroplast GO:0048046|apoplast
pt2_00481	A	A1S	Potri.001G010900	Potri.001G010900(AS)	POPTR_0001s04810	NA	NA	AT5G06700.1	| Symbols: TBR | Plant protein of unknown function (DUF828) | chr5:2063638-2065810 FORWARD LENGTH=608	LOC_Os06g10560.1	protein|leaf senescence related protein, putative, expressed	IMGA|Medtr5g059400.1	hypothetical protein chr5 23887742-23890576 H EGN_Mt100125 20111014	GO:0009827|plant-type cell wall modification GO:0030244|cellulose biosynthetic process GO:0045489|pectin biosynthetic process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_00482	A	A2S	Potri.001G011000	Potri.001G011000(AS) Potri.001G011300(DS)	POPTR_0001s04820	sp|P00433|PER1A_ARMRU	Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE=1 SV=2	AT3G49120.1	| Symbols: ATPERX34, PERX34, PRXCB, ATPCB, PRX34 | peroxidase CB | chr3:18207819-18210041 FORWARD LENGTH=353	LOC_Os03g13200.1	protein|peroxidase precursor, putative, expressed	IMGA|Medtr5g017850.1	Peroxidase chr5 6345400-6343739 E EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0006952|defense response GO:0006979|response to oxidative stress GO:0009416|response to light stimulus GO:0009615|response to virus GO:0009723|response to ethylene stimulus GO:0009826|unidimensional cell growth GO:0042742|defense response to bacterium GO:0050832|defense response to fungus GO:0052033|pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response GO:0055114|oxidation-reduction process GO:0072593|reactive oxygen species metabolic process	GO:0004601|peroxidase activity GO:0020037|heme binding	GO:0005576|extracellular region GO:0005618|cell wall GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0009505|plant-type cell wall GO:0048046|apoplast
pt2_00483	A	A1S	Potri.001G011100	Potri.001G011100(AS)	POPTR_0001s04830	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00484	A	A3S	Potri.001G011200	Potri.001G011200(AS) Potri.001G011000(DS) Potri.001G011300(DS)	POPTR_0001s04840	sp|P00433|PER1A_ARMRU	Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE=1 SV=2	AT3G49120.1	| Symbols: ATPERX34, PERX34, PRXCB, ATPCB, PRX34 | peroxidase CB | chr3:18207819-18210041 FORWARD LENGTH=353	LOC_Os03g13200.1	protein|peroxidase precursor, putative, expressed	IMGA|Medtr5g021060.2	Peroxidase chr5 7821272-7822903 F EGN_Mt100125 20111014	GO:0006952|defense response GO:0009416|response to light stimulus GO:0009826|unidimensional cell growth GO:0042742|defense response to bacterium GO:0050832|defense response to fungus GO:0052033|pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response GO:0072593|reactive oxygen species metabolic process	GO:0004601|peroxidase activity GO:0020037|heme binding	GO:0005576|extracellular region GO:0005618|cell wall GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0009505|plant-type cell wall GO:0048046|apoplast
pt2_00485	A	A3S	Potri.001G011300	Potri.001G011300(AS) Potri.001G011000(BS) Potri.001G011200(DS)	POPTR_0001s04850	sp|P00433|PER1A_ARMRU	Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE=1 SV=2	AT3G49120.1	| Symbols: ATPERX34, PERX34, PRXCB, ATPCB, PRX34 | peroxidase CB | chr3:18207819-18210041 FORWARD LENGTH=353	LOC_Os03g13200.1	protein|peroxidase precursor, putative, expressed	IMGA|Medtr5g017850.1	Peroxidase chr5 6345400-6343739 E EGN_Mt100125 20111014	GO:0006952|defense response GO:0009416|response to light stimulus GO:0009826|unidimensional cell growth GO:0042742|defense response to bacterium GO:0050832|defense response to fungus GO:0052033|pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response GO:0072593|reactive oxygen species metabolic process	GO:0004601|peroxidase activity GO:0020037|heme binding	GO:0005576|extracellular region GO:0005618|cell wall GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0009505|plant-type cell wall GO:0048046|apoplast
pt2_00486	C	C1S	Potri.001G011400	Potri.001G011400(CS)	sp|O80912|PER23_ARATH	Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=2 SV=1	AT2G38390.1	| Symbols: | Peroxidase superfamily protein | chr2:16079726-16081381 FORWARD LENGTH=349	LOC_Os11g02100.1	protein|peroxidase precursor, putative, expressed	IMGA|Medtr5g017850.1	Peroxidase chr5 6345400-6343739 E EGN_Mt100125 20111014	GO:0006979|response to oxidative stress GO:0055114|oxidation-reduction process	GO:0004601|peroxidase activity GO:0020037|heme binding	GO:0005576|extracellular region GO:0005774|vacuolar membrane
pt2_00487	A	A1S	Potri.001G011500	Potri.001G011500(AS)	POPTR_0001s04870	sp|Q9LEH3|PER15_IPOBA	Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1	AT5G06720.1	| Symbols: ATPA2, PA2 | peroxidase 2 | chr5:2077567-2078857 REVERSE LENGTH=335	LOC_Os03g13200.1	protein|peroxidase precursor, putative, expressed	IMGA|Medtr5g074970.1	Peroxidase chr5 30853893-30857597 F EGN_Mt100125 20111014	GO:0002215|defense response to nematode GO:0006979|response to oxidative stress GO:0009908|flower development GO:0055114|oxidation-reduction process	GO:0004601|peroxidase activity GO:0020037|heme binding	GO:0005576|extracellular region GO:0005794|Golgi apparatus
pt2_00488	R	R	NA	NA	POPTR_0001s04875	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00489	C	C1S	Potri.001G011600	Potri.001G011600(CS)	sp|Q42517|PERN_ARMRU	Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 SV=1	AT5G19890.1	| Symbols: | Peroxidase superfamily protein | chr5:6724372-6725877 REVERSE LENGTH=328	NA	NA	NA	NA	GO:0006979|response to oxidative stress GO:0055114|oxidation-reduction process	GO:0004601|peroxidase activity GO:0020037|heme binding	GO:0005576|extracellular region GO:0005634|nucleus GO:0005737|cytoplasm
pt2_00490	B	B1S	Potri.001G011700	Potri.001G011700(BS)	POPTR_0001s04900	sp|Q8LAP6|PAP12_ARATH	Probable plastid-lipid-associated protein 12, chloroplastic OS=Arabidopsis thaliana GN=PAP12 PE=2 SV=1	AT1G51110.1	| Symbols: | Plastid-lipid associated protein PAP / fibrillin family protein | chr1:18935380-18937484 FORWARD LENGTH=409	LOC_Os07g28790.1	protein|PAP fibrillin family domain containing protein, expressed	IMGA|Medtr1g116320.1	hypothetical protein chr1 33794029-33790925 F EGN_Mt100125 20111014	GO:0000162|tryptophan biosynthetic process GO:0006098|pentose-phosphate shunt GO:0010027|thylakoid membrane organization	GO:0005198|structural molecule activity	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009941|chloroplast envelope GO:0016020|membrane
pt2_00491	A	A1A	Potri.001G011800	Potri.001G011800(AA)	POPTR_0001s04910	NA	NA	AT5G19900.1	| Symbols: | PRLI-interacting factor, putative | chr5:6728561-6730045 REVERSE LENGTH=494	LOC_Os02g58570.1	protein|PRLI-interacting factor A, putative, expressed	IMGA|Medtr1g116330.1	PRLI-interacting factor A chr1 33798868-33796852 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00492	A	A1S	Potri.001G011800	Potri.001G011800(AS)	POPTR_0001s04920	NA	NA	AT5G19900.1	| Symbols: | PRLI-interacting factor, putative | chr5:6728561-6730045 REVERSE LENGTH=494	LOC_Os02g58570.1	protein|PRLI-interacting factor A, putative, expressed	IMGA|Medtr1g116330.1	PRLI-interacting factor A chr1 33798868-33796852 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00493	A	A1S	Potri.001G011900	Potri.001G011900(AS)	POPTR_0001s04940	sp|Q9SFU6|CALS9_ARATH	Callose synthase 9 OS=Arabidopsis thaliana GN=CALS9 PE=2 SV=2	AT3G07160.1	| Symbols: ATGSL10, gsl10, CALS9 | glucan synthase-like 10 | chr3:2265142-2279383 REVERSE LENGTH=1890	LOC_Os06g08380.1	protein|1,3-beta-glucan synthase component domain containing protein, expressed	IMGA|AC235753_1023.1	Callose synthase AC235753.2 124305-113042 E EGN_Mt100125 20111014	GO:0006075|(1->3)-beta-D-glucan biosynthetic process GO:0006606|protein import into nucleus GO:0006944|cellular membrane fusion GO:0009555|pollen development GO:0009556|microsporogenesis GO:0009846|pollen germination GO:0048589|developmental growth GO:0052543|callose deposition in cell wall GO:0055047|generative cell mitosis GO:0080092|regulation of pollen tube growth	GO:0003843|1,3-beta-D-glucan synthase activity	GO:0000148|1,3-beta-D-glucan synthase complex GO:0005794|Golgi apparatus GO:0005886|plasma membrane
pt2_00494	A	A1S	Potri.001G012000	Potri.001G012000(AS)	POPTR_0001s04950	sp|Q9SFU6|CALS9_ARATH	Callose synthase 9 OS=Arabidopsis thaliana GN=CALS9 PE=2 SV=2	AT3G07160.1	| Symbols: ATGSL10, gsl10, CALS9 | glucan synthase-like 10 | chr3:2265142-2279383 REVERSE LENGTH=1890	LOC_Os06g51270.1	protein|1,3-beta-glucan synthase component domain containing protein, expressed	IMGA|Medtr1g116450.1	Callose synthase chr1 33858802-33875517 E EGN_Mt100125 20111014	GO:0006075|(1->3)-beta-D-glucan biosynthetic process GO:0006606|protein import into nucleus GO:0006944|cellular membrane fusion GO:0009555|pollen development GO:0009556|microsporogenesis GO:0009846|pollen germination GO:0048589|developmental growth GO:0052543|callose deposition in cell wall GO:0055047|generative cell mitosis GO:0080092|regulation of pollen tube growth	GO:0003843|1,3-beta-D-glucan synthase activity	GO:0000148|1,3-beta-D-glucan synthase complex GO:0005794|Golgi apparatus GO:0005886|plasma membrane
pt2_00495	A	A1S	Potri.001G012100	Potri.001G012100(AS)	POPTR_0001s04960	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00496	A	A1S	Potri.001G012200	Potri.001G012200(AS)	POPTR_0001s04970	sp|Q9LXT9|CALS3_ARATH	Callose synthase 3 OS=Arabidopsis thaliana GN=CALS3 PE=2 SV=3	AT5G13000.1	| Symbols: ATGSL12, gsl12 | glucan synthase-like 12 | chr5:4110445-4121202 REVERSE LENGTH=1955	LOC_Os03g03610.1	protein|1,3-beta-glucan synthase component domain containing protein, expressed	IMGA|AC235753_1023.1	Callose synthase AC235753.2 124305-113042 E EGN_Mt100125 20111014	GO:0000226|microtubule cytoskeleton organization GO:0006075|(1->3)-beta-D-glucan biosynthetic process GO:0006346|methylation-dependent chromatin silencing GO:0006944|cellular membrane fusion GO:0007267|cell-cell signaling GO:0009556|microsporogenesis GO:0009616|virus induced gene silencing GO:0010267|production of ta-siRNAs involved in RNA interference GO:0016246|RNA interference GO:0031048|chromatin silencing by small RNA GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0051567|histone H3-K9 methylation GO:0052543|callose deposition in cell wall	GO:0003843|1,3-beta-D-glucan synthase activity GO:0016757|transferase activity, transferring glycosyl groups	GO:0000148|1,3-beta-D-glucan synthase complex GO:0005886|plasma membrane GO:0016020|membrane
pt2_00497	A	A1S	Potri.001G012300	Potri.001G012300(AS)	POPTR_0001s04980	sp|D1FP53|LIN_MEDTR	Putative E3 ubiquitin-protein ligase LIN OS=Medicago truncatula GN=LIN PE=2 SV=1	AT5G42340.1	| Symbols: PUB15 | Plant U-Box 15 | chr5:16928086-16930367 REVERSE LENGTH=660	LOC_Os04g49500.1	protein|U-box domain-containing protein, putative, expressed	IMGA|Medtr1g090320.1	U-box domain-containing protein chr1 24918857-24926483 H EGN_Mt100125 20111014	GO:0006944|cellular membrane fusion GO:0016567|protein ubiquitination GO:0048610|cellular process involved in reproduction GO:0048868|pollen tube development	GO:0004842|ubiquitin-protein ligase activity	GO:0000151|ubiquitin ligase complex GO:0005634|nucleus
pt2_00498	A	A1S	Potri.T180100	Potri.T180100(AS)	POPTR_0001s04990	sp|P48630|FD6E1_SOYBN	Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1 OS=Glycine max GN=FAD2-1 PE=2 SV=1	AT3G12120.2	| Symbols: FAD2 | fatty acid desaturase 2 | chr3:3860592-3861743 REVERSE LENGTH=383	LOC_Os02g48560.6	protein|fatty acid desaturase, putative, expressed	IMGA|Medtr5g071170.1	Omega-3 fatty acid desaturase chr5 29225742-29223460 H EGN_Mt100125 20111014	GO:0006629|lipid metabolic process GO:0055114|oxidation-reduction process	GO:0016717|oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water GO:0016720|delta12-fatty acid dehydrogenase activity GO:0045485|omega-6 fatty acid desaturase activity	GO:0005634|nucleus GO:0005783|endoplasmic reticulum
pt2_00499	C	C1S	Potri.001G012500	Potri.001G012500(CS)	sp|P48630|FD6E1_SOYBN	Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1 OS=Glycine max GN=FAD2-1 PE=2 SV=1	AT3G12120.2	| Symbols: FAD2 | fatty acid desaturase 2 | chr3:3860592-3861743 REVERSE LENGTH=383	LOC_Os02g48560.1	protein|fatty acid desaturase, putative, expressed	IMGA|Medtr5g071170.1	Omega-3 fatty acid desaturase chr5 29225742-29223460 H EGN_Mt100125 20111014	GO:0006629|lipid metabolic process GO:0055114|oxidation-reduction process	GO:0016717|oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water GO:0016720|delta12-fatty acid dehydrogenase activity GO:0045485|omega-6 fatty acid desaturase activity	GO:0005634|nucleus GO:0005783|endoplasmic reticulum
pt2_00500	A	A1S	Potri.001G012600	Potri.001G012600(AS)	POPTR_0001s05010	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00501	A	A1S	Potri.001G012700	Potri.001G012700(AS)	POPTR_0001s05020	sp|P48630|FD6E1_SOYBN	Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1 OS=Glycine max GN=FAD2-1 PE=2 SV=1	AT3G12120.2	| Symbols: FAD2 | fatty acid desaturase 2 | chr3:3860592-3861743 REVERSE LENGTH=383	LOC_Os02g48560.2	protein|fatty acid desaturase, putative, expressed	IMGA|Medtr5g071170.1	Omega-3 fatty acid desaturase chr5 29225742-29223460 H EGN_Mt100125 20111014	GO:0006629|lipid metabolic process GO:0055114|oxidation-reduction process	GO:0016717|oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water GO:0016720|delta12-fatty acid dehydrogenase activity GO:0045485|omega-6 fatty acid desaturase activity	GO:0005634|nucleus GO:0005783|endoplasmic reticulum
pt2_00502	A	A1S	Potri.001G012800	Potri.001G012800(AS)	POPTR_0001s05030	sp|Q9ZPV5|NOC2L_ARATH	Nucleolar complex protein 2 homolog OS=Arabidopsis thaliana GN=At2g18220 PE=2 SV=2	AT2G18220.1	| Symbols: | Noc2p family | chr2:7928254-7931851 FORWARD LENGTH=764	LOC_Os10g35280.1	protein|nucleolar complex protein 2, putative, expressed	IMGA|Medtr1g110560.1	Nucleolar complex protein-like protein chr1 32623544-32617867 E EGN_Mt100125 20111014	GO:0008150|biological_process GO:0009220|pyrimidine ribonucleotide biosynthetic process GO:0042991|transcription factor import into nucleus	NA	GO:0005634|nucleus GO:0005829|cytosol
pt2_00503	A	A1S	Potri.001G012900	Potri.001G012900(AS)	POPTR_0001s05040	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00504	A	A1S	Potri.001G013000	Potri.001G013000(AS)	POPTR_0001s05050	sp|P00433|PER1A_ARMRU	Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE=1 SV=2	AT3G49110.1	| Symbols: PRX33, PRXCA, ATPRX33, ATPCA | peroxidase CA | chr3:18200713-18202891 FORWARD LENGTH=354	LOC_Os03g13200.1	protein|peroxidase precursor, putative, expressed	IMGA|Medtr5g017850.1	Peroxidase chr5 6345400-6343739 E EGN_Mt100125 20111014	GO:0006952|defense response GO:0009416|response to light stimulus GO:0009826|unidimensional cell growth GO:0042742|defense response to bacterium GO:0050832|defense response to fungus GO:0052033|pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response GO:0072593|reactive oxygen species metabolic process	GO:0004601|peroxidase activity GO:0020037|heme binding	GO:0005576|extracellular region GO:0005773|vacuole GO:0009505|plant-type cell wall
pt2_00505	C	C1S	Potri.001G011400	Potri.001G011400(CS)	sp|O80912|PER23_ARATH	Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=2 SV=1	AT2G38390.1	| Symbols: | Peroxidase superfamily protein | chr2:16079726-16081381 FORWARD LENGTH=349	LOC_Os11g02100.1	protein|peroxidase precursor, putative, expressed	IMGA|Medtr5g017850.1	Peroxidase chr5 6345400-6343739 E EGN_Mt100125 20111014	GO:0006979|response to oxidative stress GO:0055114|oxidation-reduction process	GO:0004601|peroxidase activity GO:0020037|heme binding	GO:0005576|extracellular region GO:0005774|vacuolar membrane
pt2_00506	B	B1S	Potri.001G013200	Potri.001G013200(BS)	POPTR_0001s05070	sp|Q7F8R0|C3H14_ORYSJ	Zinc finger CCCH domain-containing protein 14 OS=Oryza sativa subsp. japonica GN=Os02g0194200 PE=2 SV=1	AT5G06770.1	| Symbols: | KH domain-containing protein / zinc finger (CCCH type) family protein | chr5:2090937-2092787 REVERSE LENGTH=240	LOC_Os02g10080.1	protein|zinc finger C-x8-C-x5-C-x3-H type family protein, expressed	IMGA|Medtr1g116940.1	Zinc finger CCCH domain-containing protein chr1 34111516-34106513 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003676|nucleic acid binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0003723|RNA binding GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_00507	A	A1S	Potri.001G013300	Potri.001G013300(AS)	POPTR_0001s05080	NA	NA	AT1G73240.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Nucleoporin protein Ndc1-Nup (InterPro:IPR019049); Has 36 Blast hits to 36 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:27542397-27544668 REVERSE LENGTH=519	LOC_Os02g45920.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_00508	G	G1	NA	NA	POPTR_0001s05090	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00509	A	A1S	Potri.001G013500	Potri.001G013500(AS)	POPTR_0001s05100	sp|P80030|FABI_BRANA	Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic OS=Brassica napus PE=1 SV=2	AT2G05990.2	| Symbols: MOD1, ENR1 | NAD(P)-binding Rossmann-fold superfamily protein | chr2:2322876-2324867 FORWARD LENGTH=390	LOC_Os08g23810.1	protein|enoyl-acyl-carrier-protein reductase NADH, chloroplast precursor, expressed	NA	NA	GO:0006084|acetyl-CoA metabolic process GO:0006633|fatty acid biosynthetic process GO:0006816|calcium ion transport GO:0007030|Golgi organization GO:0008152|metabolic process GO:0009651|response to salt stress GO:0016126|sterol biosynthetic process GO:0016132|brassinosteroid biosynthetic process GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0004318|enoyl-[acyl-carrier-protein] reductase (NADH) activity GO:0005507|copper ion binding GO:0016491|oxidoreductase activity GO:0016631|enoyl-[acyl-carrier-protein] reductase activity	GO:0005835|fatty acid synthase complex GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009579|thylakoid GO:0009941|chloroplast envelope
pt2_00510	A	A2S	Potri.001G013500	Potri.001G013500(AS) Potri.003G212700(DS)	POPTR_0001s05100	sp|P80030|FABI_BRANA	Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic OS=Brassica napus PE=1 SV=2	AT2G05990.2	| Symbols: MOD1, ENR1 | NAD(P)-binding Rossmann-fold superfamily protein | chr2:2322876-2324867 FORWARD LENGTH=390	LOC_Os08g23810.1	protein|enoyl-acyl-carrier-protein reductase NADH, chloroplast precursor, expressed	NA	NA	GO:0006084|acetyl-CoA metabolic process GO:0006633|fatty acid biosynthetic process GO:0006816|calcium ion transport GO:0007030|Golgi organization GO:0008152|metabolic process GO:0009651|response to salt stress GO:0016126|sterol biosynthetic process GO:0016132|brassinosteroid biosynthetic process GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0004318|enoyl-[acyl-carrier-protein] reductase (NADH) activity GO:0005507|copper ion binding GO:0016491|oxidoreductase activity GO:0016631|enoyl-[acyl-carrier-protein] reductase activity	GO:0005835|fatty acid synthase complex GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009579|thylakoid GO:0009941|chloroplast envelope
pt2_00511	A	A1S	Potri.001G013600	Potri.001G013600(AS)	POPTR_0001s05110	NA	NA	AT3G57980.1	| Symbols: | DNA-binding bromodomain-containing protein | chr3:21466919-21469148 REVERSE LENGTH=632	LOC_Os08g39980.1	protein|DNA-binding bromodomain-containing protein, putative, expressed	NA	NA	NA	GO:0003677|DNA binding	GO:0005634|nucleus
pt2_00512	A	A1S	Potri.001G013600	Potri.001G013600(AS)	POPTR_0001s05120	NA	NA	AT3G57980.1	| Symbols: | DNA-binding bromodomain-containing protein | chr3:21466919-21469148 REVERSE LENGTH=632	LOC_Os08g39980.1	protein|DNA-binding bromodomain-containing protein, putative, expressed	NA	NA	NA	GO:0003677|DNA binding	GO:0005634|nucleus
pt2_00513	A	A2S	Potri.T166500	Potri.T166500(AS) Potri.012G049800(BS)	POPTR_0001s05130	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00514	A	A1S	Potri.001G013700	Potri.001G013700(AS)	POPTR_0001s05140	NA	NA	AT5G19630.1	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr5:6628147-6629937 REVERSE LENGTH=228	LOC_Os02g48590.1	protein|expressed protein	NA	NA	GO:0006508|proteolysis GO:0008150|biological_process	GO:0004177|aminopeptidase activity	GO:0005575|cellular_component
pt2_00515	A	A1S	Potri.001G013800	Potri.001G013800(AS)	POPTR_0001s05150	NA	NA	AT5G13020.1	| Symbols: | Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein | chr5:4129691-4132089 REVERSE LENGTH=397	LOC_Os08g23930.2	protein|ENT domain containing protein, expressed	NA	NA	GO:0008150|biological_process GO:0008284|positive regulation of cell proliferation GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00516	A	A1S	Potri.001G013900	Potri.001G013900(AS)	POPTR_0001s05160	sp|A1K5T6|Y1574_AZOSB	UPF0061 protein azo1574 OS=Azoarcus sp. (strain BH72) GN=azo1574 PE=3 SV=1	AT5G13030.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0061 (InterPro:IPR003846); Has 5046 Blast hits to 4997 proteins in 1211 species: Archae - 8; Bacteria - 2327; Metazoa - 120; Fungi - 134; Plants - 48; Viruses - 0; Other Eukaryotes - 2409 (source: NCBI BLink). | chr5:4133216-4136461 FORWARD LENGTH=633	LOC_Os06g21600.1	protein|selenoprotein O, putative, expressed	IMGA|Medtr1g116880.1	hypothetical protein chr1 34086876-34078092 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_00517	A	A1S	Potri.001G014000	Potri.001G014000(AS)	POPTR_0001s05170	sp|Q9SXP7|LIPB_ARATH	Octanoyltransferase OS=Arabidopsis thaliana GN=LIP2 PE=1 SV=1	AT1G04640.2	| Symbols: LIP2 | lipoyltransferase 2 | chr1:1292541-1293248 FORWARD LENGTH=235	LOC_Os03g20560.1	protein|biotin--protein ligase, putative, expressed	NA	NA	GO:0000096|sulfur amino acid metabolic process GO:0006098|pentose-phosphate shunt GO:0006364|rRNA processing GO:0006464|cellular protein modification process GO:0006546|glycine catabolic process GO:0006636|unsaturated fatty acid biosynthetic process GO:0006733|oxidoreduction coenzyme metabolic process GO:0006766|vitamin metabolic process GO:0008652|cellular amino acid biosynthetic process GO:0009072|aromatic amino acid family metabolic process GO:0009106|lipoate metabolic process GO:0009107|lipoate biosynthetic process GO:0009108|coenzyme biosynthetic process GO:0009117|nucleotide metabolic process GO:0009249|protein lipoylation GO:0009695|jasmonic acid biosynthetic process GO:0015995|chlorophyll biosynthetic process GO:0019243|methylglyoxal catabolic process to D-lactate GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019748|secondary metabolic process GO:0044272|sulfur compound biosynthetic process	GO:0003824|catalytic activity GO:0016415|octanoyltransferase activity GO:0017118|lipoyltransferase activity GO:0033819|lipoyl(octanoyl) transferase activity	GO:0005737|cytoplasm GO:0005739|mitochondrion
pt2_00518	C	C1S	Potri.001G014000	Potri.001G014000(CS)	sp|Q9SXP7|LIPB_ARATH	Octanoyltransferase OS=Arabidopsis thaliana GN=LIP2 PE=1 SV=1	AT1G04640.2	| Symbols: LIP2 | lipoyltransferase 2 | chr1:1292541-1293248 FORWARD LENGTH=235	LOC_Os03g20560.1	protein|biotin--protein ligase, putative, expressed	NA	NA	GO:0000096|sulfur amino acid metabolic process GO:0006098|pentose-phosphate shunt GO:0006364|rRNA processing GO:0006464|cellular protein modification process GO:0006546|glycine catabolic process GO:0006636|unsaturated fatty acid biosynthetic process GO:0006733|oxidoreduction coenzyme metabolic process GO:0006766|vitamin metabolic process GO:0008652|cellular amino acid biosynthetic process GO:0009072|aromatic amino acid family metabolic process GO:0009106|lipoate metabolic process GO:0009107|lipoate biosynthetic process GO:0009108|coenzyme biosynthetic process GO:0009117|nucleotide metabolic process GO:0009249|protein lipoylation GO:0009695|jasmonic acid biosynthetic process GO:0015995|chlorophyll biosynthetic process GO:0019243|methylglyoxal catabolic process to D-lactate GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019748|secondary metabolic process GO:0044272|sulfur compound biosynthetic process	GO:0003824|catalytic activity GO:0016415|octanoyltransferase activity GO:0017118|lipoyltransferase activity GO:0033819|lipoyl(octanoyl) transferase activity	GO:0005737|cytoplasm GO:0005739|mitochondrion
pt2_00519	A	A1S	Potri.001G014000	Potri.001G014000(AS)	POPTR_0001s05180	sp|Q9SXP7|LIPB_ARATH	Octanoyltransferase OS=Arabidopsis thaliana GN=LIP2 PE=1 SV=1	AT1G04640.2	| Symbols: LIP2 | lipoyltransferase 2 | chr1:1292541-1293248 FORWARD LENGTH=235	LOC_Os03g20560.1	protein|biotin--protein ligase, putative, expressed	NA	NA	GO:0000096|sulfur amino acid metabolic process GO:0006098|pentose-phosphate shunt GO:0006364|rRNA processing GO:0006464|cellular protein modification process GO:0006546|glycine catabolic process GO:0006636|unsaturated fatty acid biosynthetic process GO:0006733|oxidoreduction coenzyme metabolic process GO:0006766|vitamin metabolic process GO:0008652|cellular amino acid biosynthetic process GO:0009072|aromatic amino acid family metabolic process GO:0009106|lipoate metabolic process GO:0009107|lipoate biosynthetic process GO:0009108|coenzyme biosynthetic process GO:0009117|nucleotide metabolic process GO:0009249|protein lipoylation GO:0009695|jasmonic acid biosynthetic process GO:0015995|chlorophyll biosynthetic process GO:0019243|methylglyoxal catabolic process to D-lactate GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019748|secondary metabolic process GO:0044272|sulfur compound biosynthetic process	GO:0003824|catalytic activity GO:0016415|octanoyltransferase activity GO:0017118|lipoyltransferase activity GO:0033819|lipoyl(octanoyl) transferase activity	GO:0005737|cytoplasm GO:0005739|mitochondrion
pt2_00520	A	A2S	Potri.001G014100	Potri.001G014100(AS) Potri.001G014600(AS)	POPTR_0001s05190	sp|Q39202|RLK1_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 OS=Arabidopsis thaliana GN=RLK1 PE=2 SV=2	AT5G60900.1	| Symbols: RLK1 | receptor-like protein kinase 1 | chr5:24498467-24501494 REVERSE LENGTH=748	LOC_Os04g12600.1	protein|receptor-like protein kinase, putative, expressed	IMGA|Medtr5g013130.1	Kinase-like protein chr5 3871934-3874336 H EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0006355|regulation of transcription, DNA-dependent GO:0006468|protein phosphorylation GO:0006612|protein targeting to membrane GO:0009617|response to bacterium GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0031348|negative regulation of defense response GO:0035304|regulation of protein dephosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_00521	A	A2S	Potri.001G014300	Potri.001G014300(AS) Potri.001G014400(DS)	POPTR_0001s05200	sp|Q39202|RLK1_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 OS=Arabidopsis thaliana GN=RLK1 PE=2 SV=2	AT5G60900.1	| Symbols: RLK1 | receptor-like protein kinase 1 | chr5:24498467-24501494 REVERSE LENGTH=748	LOC_Os04g12580.1	protein|receptor-like protein kinase, putative, expressed	IMGA|Medtr5g013130.1	Kinase-like protein chr5 3871934-3874336 H EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0006355|regulation of transcription, DNA-dependent GO:0006468|protein phosphorylation GO:0006612|protein targeting to membrane GO:0009617|response to bacterium GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0031348|negative regulation of defense response GO:0035304|regulation of protein dephosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_00522	A	A1S	Potri.001G014400	Potri.001G014400(AS)	POPTR_0001s05210	sp|Q39202|RLK1_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 OS=Arabidopsis thaliana GN=RLK1 PE=2 SV=2	AT5G60900.1	| Symbols: RLK1 | receptor-like protein kinase 1 | chr5:24498467-24501494 REVERSE LENGTH=748	LOC_Os04g12600.1	protein|receptor-like protein kinase, putative, expressed	IMGA|Medtr5g013130.1	Kinase-like protein chr5 3871934-3874336 H EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0006355|regulation of transcription, DNA-dependent GO:0006468|protein phosphorylation GO:0006612|protein targeting to membrane GO:0009617|response to bacterium GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0031348|negative regulation of defense response GO:0035304|regulation of protein dephosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_00523	A	A1S	Potri.001G014400	Potri.001G014400(AS)	POPTR_0001s05220	sp|Q39202|RLK1_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 OS=Arabidopsis thaliana GN=RLK1 PE=2 SV=2	AT5G60900.1	| Symbols: RLK1 | receptor-like protein kinase 1 | chr5:24498467-24501494 REVERSE LENGTH=748	LOC_Os04g12600.1	protein|receptor-like protein kinase, putative, expressed	IMGA|Medtr5g013130.1	Kinase-like protein chr5 3871934-3874336 H EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0006355|regulation of transcription, DNA-dependent GO:0006468|protein phosphorylation GO:0006612|protein targeting to membrane GO:0009617|response to bacterium GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0031348|negative regulation of defense response GO:0035304|regulation of protein dephosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_00524	A	A2S	Potri.001G014500	Potri.001G014500(AS) Potri.001G014700(DS)	POPTR_0001s05230	sp|Q39202|RLK1_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 OS=Arabidopsis thaliana GN=RLK1 PE=2 SV=2	AT5G60900.1	| Symbols: RLK1 | receptor-like protein kinase 1 | chr5:24498467-24501494 REVERSE LENGTH=748	LOC_Os04g12560.1	protein|receptor-like protein kinase, putative, expressed	IMGA|Medtr5g013130.1	Kinase-like protein chr5 3871934-3874336 H EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0006355|regulation of transcription, DNA-dependent GO:0006468|protein phosphorylation GO:0006612|protein targeting to membrane GO:0009617|response to bacterium GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0031348|negative regulation of defense response GO:0035304|regulation of protein dephosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_00525	C	C2S	Potri.001G014600	Potri.001G014600(CS) Potri.001G014100(CS)	sp|Q39202|RLK1_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 OS=Arabidopsis thaliana GN=RLK1 PE=2 SV=2	AT5G60900.1	| Symbols: RLK1 | receptor-like protein kinase 1 | chr5:24498467-24501494 REVERSE LENGTH=748	LOC_Os04g39930.1	protein|receptor-like protein kinase, putative, expressed	IMGA|Medtr5g013130.1	Kinase-like protein chr5 3871934-3874336 H EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0006355|regulation of transcription, DNA-dependent GO:0006468|protein phosphorylation GO:0006612|protein targeting to membrane GO:0009617|response to bacterium GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0031348|negative regulation of defense response GO:0035304|regulation of protein dephosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_00526	A	A1S	Potri.001G014700	Potri.001G014700(AS)	POPTR_0001s05250	sp|Q39202|RLK1_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 OS=Arabidopsis thaliana GN=RLK1 PE=2 SV=2	AT5G60900.1	| Symbols: RLK1 | receptor-like protein kinase 1 | chr5:24498467-24501494 REVERSE LENGTH=748	LOC_Os04g12560.1	protein|receptor-like protein kinase, putative, expressed	IMGA|Medtr5g013130.1	Kinase-like protein chr5 3871934-3874336 H EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0006355|regulation of transcription, DNA-dependent GO:0006468|protein phosphorylation GO:0006612|protein targeting to membrane GO:0009617|response to bacterium GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0031348|negative regulation of defense response GO:0035304|regulation of protein dephosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_00527	A	A10S	Potri.001G014800	Potri.001G014800(AS) Potri.T084800(DS) Potri.003G211900(DS) Potri.003G211700(DS) Potri.003G211500(DS) Potri.003G211400(DS) Potri.003G211300(DS) Potri.T085100(DS) Potri.T085000(DS) Potri.T084900(DS)	POPTR_0001s05255	sp|Q39202|RLK1_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 OS=Arabidopsis thaliana GN=RLK1 PE=2 SV=2	AT5G60900.1	| Symbols: RLK1 | receptor-like protein kinase 1 | chr5:24498467-24501494 REVERSE LENGTH=748	LOC_Os04g12600.1	protein|receptor-like protein kinase, putative, expressed	IMGA|Medtr5g013070.1	Kinase-like protein chr5 3848744-3851155 H EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0006355|regulation of transcription, DNA-dependent GO:0006468|protein phosphorylation GO:0006612|protein targeting to membrane GO:0009617|response to bacterium GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0031348|negative regulation of defense response GO:0035304|regulation of protein dephosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_00528	A	A1S	Potri.001G014900	Potri.001G014900(AS)	POPTR_0001s05260	sp|Q9FGR2|PP436_ARATH	Pentatricopeptide repeat-containing protein At5g59600 OS=Arabidopsis thaliana GN=PCMP-E1 PE=2 SV=1	AT5G59600.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:24011315-24012919 REVERSE LENGTH=534	LOC_Os12g36620.1	protein|pentatricopeptide, putative, expressed	IMGA|contig_53197_3.1	Pentatricopeptide repeat protein contig_53197 10365-8485 H PREDN 20111014	GO:0007062|sister chromatid cohesion GO:0007131|reciprocal meiotic recombination GO:0008150|biological_process GO:0033044|regulation of chromosome organization GO:0042138|meiotic DNA double-strand break formation GO:0045132|meiotic chromosome segregation	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_00529	A	A3S	Potri.001G015000	Potri.001G015000(AS) Potri.003G211200(DS) Potri.T085200(DS)	POPTR_0001s05270	NA	NA	AT3G57930.2	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42190.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr3:21447250-21447675 REVERSE LENGTH=141	LOC_Os02g48600.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00530	A	A1S	Potri.001G015100	Potri.001G015100(AS)	POPTR_0001s05280	sp|Q5Z9Z0|BGL24_ORYSJ	Beta-glucosidase 24 OS=Oryza sativa subsp. japonica GN=BGLU24 PE=2 SV=1	AT5G44640.1	| Symbols: BGLU13 | beta glucosidase 13 | chr5:18011146-18012669 FORWARD LENGTH=507	LOC_Os06g21570.1	protein|Os6bglu24 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed	IMGA|Medtr5g071520.1	Beta-glucosidase D7 chr5 29396807-29401668 H EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0043169|cation binding	GO:0005576|extracellular region GO:0005794|Golgi apparatus
pt2_00531	A	A1S	Potri.001G015200	Potri.001G015200(AS)	POPTR_0001s05290	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00532	A	A2S	Potri.001G015300	Potri.001G015300(AS) Potri.001G015400(DS)	POPTR_0001s05310	sp|O24370|LOX21_SOLTU	Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum GN=LOX2.1 PE=1 SV=1	AT3G45140.1	| Symbols: LOX2, ATLOX2 | lipoxygenase 2 | chr3:16525437-16529233 FORWARD LENGTH=896	LOC_Os02g10120.1	protein|lipoxygenase, putative, expressed	IMGA|Medtr1g104650.1	Lipoxygenase chr1 30761068-30754677 F EGN_Mt100125 20111014	GO:0000023|maltose metabolic process GO:0000096|sulfur amino acid metabolic process GO:0006546|glycine catabolic process GO:0006636|unsaturated fatty acid biosynthetic process GO:0006733|oxidoreduction coenzyme metabolic process GO:0006766|vitamin metabolic process GO:0006816|calcium ion transport GO:0007030|Golgi organization GO:0008652|cellular amino acid biosynthetic process GO:0009072|aromatic amino acid family metabolic process GO:0009106|lipoate metabolic process GO:0009108|coenzyme biosynthetic process GO:0009117|nucleotide metabolic process GO:0009269|response to desiccation GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009416|response to light stimulus GO:0009611|response to wounding GO:0009617|response to bacterium GO:0009620|response to fungus GO:0009651|response to salt stress GO:0009695|jasmonic acid biosynthetic process GO:0009737|response to abscisic acid stimulus GO:0009753|response to jasmonic acid stimulus GO:0015994|chlorophyll metabolic process GO:0015995|chlorophyll biosynthetic process GO:0016117|carotenoid biosynthetic process GO:0019216|regulation of lipid metabolic process GO:0019252|starch biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019748|secondary metabolic process GO:0030003|cellular cation homeostasis GO:0031408|oxylipin biosynthetic process GO:0034440|lipid oxidation GO:0044272|sulfur compound biosynthetic process GO:0051707|response to other organism GO:0070838|divalent metal ion transport GO:0080027|response to herbivore	GO:0005515|protein binding GO:0016165|lipoxygenase activity	GO:0005737|cytoplasm GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope
pt2_00533	A	A2S	Potri.001G015400	Potri.001G015400(AS) Potri.001G015300(DS)	POPTR_0001s05320	sp|O24370|LOX21_SOLTU	Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum GN=LOX2.1 PE=1 SV=1	AT3G45140.1	| Symbols: LOX2, ATLOX2 | lipoxygenase 2 | chr3:16525437-16529233 FORWARD LENGTH=896	LOC_Os02g10120.1	protein|lipoxygenase, putative, expressed	IMGA|Medtr1g083020.1	Lipoxygenase chr1 21433844-21440226 E EGN_Mt100125 20111014	GO:0000023|maltose metabolic process GO:0000096|sulfur amino acid metabolic process GO:0006546|glycine catabolic process GO:0006636|unsaturated fatty acid biosynthetic process GO:0006733|oxidoreduction coenzyme metabolic process GO:0006766|vitamin metabolic process GO:0006816|calcium ion transport GO:0007030|Golgi organization GO:0008652|cellular amino acid biosynthetic process GO:0009072|aromatic amino acid family metabolic process GO:0009106|lipoate metabolic process GO:0009108|coenzyme biosynthetic process GO:0009117|nucleotide metabolic process GO:0009269|response to desiccation GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009416|response to light stimulus GO:0009611|response to wounding GO:0009617|response to bacterium GO:0009620|response to fungus GO:0009651|response to salt stress GO:0009695|jasmonic acid biosynthetic process GO:0009737|response to abscisic acid stimulus GO:0009753|response to jasmonic acid stimulus GO:0015994|chlorophyll metabolic process GO:0015995|chlorophyll biosynthetic process GO:0016117|carotenoid biosynthetic process GO:0019216|regulation of lipid metabolic process GO:0019252|starch biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019748|secondary metabolic process GO:0030003|cellular cation homeostasis GO:0031408|oxylipin biosynthetic process GO:0034440|lipid oxidation GO:0044272|sulfur compound biosynthetic process GO:0051707|response to other organism GO:0070838|divalent metal ion transport GO:0080027|response to herbivore	GO:0005515|protein binding GO:0016165|lipoxygenase activity	GO:0005737|cytoplasm GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope
pt2_00534	A	A3S	Potri.001G015600	Potri.001G015600(AS) Potri.001G015500(AS) Potri.017G046200(BS)	POPTR_0001s05330	sp|O24370|LOX21_SOLTU	Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum GN=LOX2.1 PE=1 SV=1	AT3G45140.1	| Symbols: LOX2, ATLOX2 | lipoxygenase 2 | chr3:16525437-16529233 FORWARD LENGTH=896	LOC_Os02g10120.1	protein|lipoxygenase, putative, expressed	IMGA|Medtr1g104650.1	Lipoxygenase chr1 30761068-30754677 F EGN_Mt100125 20111014	GO:0000023|maltose metabolic process GO:0000096|sulfur amino acid metabolic process GO:0006546|glycine catabolic process GO:0006636|unsaturated fatty acid biosynthetic process GO:0006733|oxidoreduction coenzyme metabolic process GO:0006766|vitamin metabolic process GO:0006816|calcium ion transport GO:0007030|Golgi organization GO:0008652|cellular amino acid biosynthetic process GO:0009072|aromatic amino acid family metabolic process GO:0009106|lipoate metabolic process GO:0009108|coenzyme biosynthetic process GO:0009117|nucleotide metabolic process GO:0009269|response to desiccation GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009416|response to light stimulus GO:0009611|response to wounding GO:0009617|response to bacterium GO:0009620|response to fungus GO:0009651|response to salt stress GO:0009695|jasmonic acid biosynthetic process GO:0009737|response to abscisic acid stimulus GO:0009753|response to jasmonic acid stimulus GO:0015994|chlorophyll metabolic process GO:0015995|chlorophyll biosynthetic process GO:0016117|carotenoid biosynthetic process GO:0019216|regulation of lipid metabolic process GO:0019252|starch biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019748|secondary metabolic process GO:0030003|cellular cation homeostasis GO:0031408|oxylipin biosynthetic process GO:0034440|lipid oxidation GO:0044272|sulfur compound biosynthetic process GO:0051707|response to other organism GO:0070838|divalent metal ion transport GO:0080027|response to herbivore	GO:0005515|protein binding GO:0016165|lipoxygenase activity	GO:0005737|cytoplasm GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope
pt2_00535	A	A3S	Potri.001G015600	Potri.001G015600(AS) Potri.001G015500(AS) Potri.017G046200(BS)	POPTR_0001s05330	sp|O24370|LOX21_SOLTU	Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum GN=LOX2.1 PE=1 SV=1	AT3G45140.1	| Symbols: LOX2, ATLOX2 | lipoxygenase 2 | chr3:16525437-16529233 FORWARD LENGTH=896	LOC_Os02g10120.1	protein|lipoxygenase, putative, expressed	IMGA|Medtr1g104650.1	Lipoxygenase chr1 30761068-30754677 F EGN_Mt100125 20111014	GO:0000023|maltose metabolic process GO:0000096|sulfur amino acid metabolic process GO:0006546|glycine catabolic process GO:0006636|unsaturated fatty acid biosynthetic process GO:0006733|oxidoreduction coenzyme metabolic process GO:0006766|vitamin metabolic process GO:0006816|calcium ion transport GO:0007030|Golgi organization GO:0008652|cellular amino acid biosynthetic process GO:0009072|aromatic amino acid family metabolic process GO:0009106|lipoate metabolic process GO:0009108|coenzyme biosynthetic process GO:0009117|nucleotide metabolic process GO:0009269|response to desiccation GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009416|response to light stimulus GO:0009611|response to wounding GO:0009617|response to bacterium GO:0009620|response to fungus GO:0009651|response to salt stress GO:0009695|jasmonic acid biosynthetic process GO:0009737|response to abscisic acid stimulus GO:0009753|response to jasmonic acid stimulus GO:0015994|chlorophyll metabolic process GO:0015995|chlorophyll biosynthetic process GO:0016117|carotenoid biosynthetic process GO:0019216|regulation of lipid metabolic process GO:0019252|starch biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019748|secondary metabolic process GO:0030003|cellular cation homeostasis GO:0031408|oxylipin biosynthetic process GO:0034440|lipid oxidation GO:0044272|sulfur compound biosynthetic process GO:0051707|response to other organism GO:0070838|divalent metal ion transport GO:0080027|response to herbivore	GO:0005515|protein binding GO:0016165|lipoxygenase activity	GO:0005737|cytoplasm GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope
pt2_00536	A	A1S	Potri.001G015700	Potri.001G015700(AS)	POPTR_0001s05340	sp|Q6DN14|MCTP1_HUMAN	Multiple C2 and transmembrane domain-containing protein 1 OS=Homo sapiens GN=MCTP1 PE=2 SV=2	AT5G12970.1	| Symbols: | Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein | chr5:4102992-4105301 FORWARD LENGTH=769	LOC_Os05g30750.4	protein|anthranilate phosphoribosyltransferase, putative, expressed	IMGA|Medtr5g010390.1	Glutathione peroxidase chr5 2530505-2527317 E EGN_Mt100125 20111014	GO:0000162|tryptophan biosynthetic process	GO:0003674|molecular_function	GO:0005618|cell wall GO:0005739|mitochondrion GO:0005783|endoplasmic reticulum GO:0009506|plasmodesma
pt2_00537	A	A1S	Potri.001G015800	Potri.001G015800(AS)	POPTR_0001s05350	NA	NA	AT5G04690.1	| Symbols: | Ankyrin repeat family protein | chr5:1349781-1352525 REVERSE LENGTH=625	NA	NA	IMGA|Medtr5g028190.1	Ankyrin repeat-containing protein chr5 11544808-11542938 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_00538	A	A1S	Potri.001G015900	Potri.001G015900(AS)	POPTR_0001s05360	sp|O23116|EIL3_ARATH	ETHYLENE INSENSITIVE 3-like 3 protein OS=Arabidopsis thaliana GN=EIL3 PE=1 SV=1	AT1G73730.1	| Symbols: EIL3, SLIM1, ATSLIM, AtEIL3 | ETHYLENE-INSENSITIVE3-like 3 | chr1:27730434-27732363 REVERSE LENGTH=567	LOC_Os09g31400.1	protein|ethylene-insensitive 3, putative, expressed	IMGA|Medtr5g087790.1	Ethylene insensitive 3-like protein chr5 37070497-37067220 F EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0000303|response to superoxide GO:0006355|regulation of transcription, DNA-dependent GO:0006612|protein targeting to membrane GO:0007165|signal transduction GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009605|response to external stimulus GO:0009651|response to salt stress GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009743|response to carbohydrate stimulus GO:0009753|response to jasmonic acid stimulus GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009873|ethylene mediated signaling pathway GO:0009970|cellular response to sulfate starvation GO:0010363|regulation of plant-type hypersensitive response GO:0030968|endoplasmic reticulum unfolded protein response GO:0031348|negative regulation of defense response GO:0035556|intracellular signal transduction GO:0042538|hyperosmotic salinity response GO:0042762|regulation of sulfur metabolic process GO:0043069|negative regulation of programmed cell death GO:0050832|defense response to fungus GO:0071281|cellular response to iron ion	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00539	A	A1S	Potri.001G016000	Potri.001G016000(AS)	POPTR_0001s05370	sp|O23116|EIL3_ARATH	ETHYLENE INSENSITIVE 3-like 3 protein OS=Arabidopsis thaliana GN=EIL3 PE=1 SV=1	AT1G73730.1	| Symbols: EIL3, SLIM1, ATSLIM, AtEIL3 | ETHYLENE-INSENSITIVE3-like 3 | chr1:27730434-27732363 REVERSE LENGTH=567	LOC_Os09g31400.1	protein|ethylene-insensitive 3, putative, expressed	IMGA|Medtr5g087790.1	Ethylene insensitive 3-like protein chr5 37070497-37067220 F EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0000303|response to superoxide GO:0006355|regulation of transcription, DNA-dependent GO:0006612|protein targeting to membrane GO:0007165|signal transduction GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009605|response to external stimulus GO:0009651|response to salt stress GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009743|response to carbohydrate stimulus GO:0009753|response to jasmonic acid stimulus GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009873|ethylene mediated signaling pathway GO:0009970|cellular response to sulfate starvation GO:0010363|regulation of plant-type hypersensitive response GO:0030968|endoplasmic reticulum unfolded protein response GO:0031348|negative regulation of defense response GO:0035556|intracellular signal transduction GO:0042538|hyperosmotic salinity response GO:0042762|regulation of sulfur metabolic process GO:0043069|negative regulation of programmed cell death GO:0050832|defense response to fungus GO:0071281|cellular response to iron ion	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00540	A	A1S	Potri.001G016100	Potri.001G016100(AS)	POPTR_0001s05380	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00541	B	B1S	Potri.001G016200	Potri.001G016200(BS)	POPTR_0001s05390	sp|Q9CXT6|KDM8_MOUSE	Lysine-specific demethylase 8 OS=Mus musculus GN=Kdm8 PE=2 SV=1	AT3G20810.1	| Symbols: JMJD5 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr3:7275814-7278144 FORWARD LENGTH=418	LOC_Os09g31380.1	protein|jmjC domain-containing protein 5, putative, expressed	IMGA|Medtr5g025190.1	JmjC domain-containing protein chr5 9962182-9965347 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0007623|circadian rhythm GO:0042752|regulation of circadian rhythm	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00542	A	A1S	Potri.001G016300	Potri.001G016300(AS)	POPTR_0001s05400	sp|Q9LXV0|U92A1_ARATH	UDP-glycosyltransferase 92A1 OS=Arabidopsis thaliana GN=UGT92A1 PE=2 SV=1	AT5G12890.1	| Symbols: | UDP-Glycosyltransferase superfamily protein | chr5:4069658-4071124 REVERSE LENGTH=488	LOC_Os04g42690.1	protein|UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed	IMGA|Medtr5g087620.1	UDP-glucuronosyltransferase 1-7C chr5 36976756-36978339 E EGN_Mt100125 20111014	GO:0008152|metabolic process	GO:0008194|UDP-glycosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups	NA
pt2_00543	A	A1A	Potri.001G016400	Potri.001G016400(AA)	POPTR_0001s05410	sp|Q9LXV0|U92A1_ARATH	UDP-glycosyltransferase 92A1 OS=Arabidopsis thaliana GN=UGT92A1 PE=2 SV=1	AT5G12890.1	| Symbols: | UDP-Glycosyltransferase superfamily protein | chr5:4069658-4071124 REVERSE LENGTH=488	LOC_Os04g20474.3	protein|UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed	IMGA|Medtr5g087620.1	UDP-glucuronosyltransferase 1-7C chr5 36976756-36978339 E EGN_Mt100125 20111014	GO:0008152|metabolic process	GO:0008194|UDP-glycosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups	NA
pt2_00544	A	A1S	Potri.001G016500	Potri.001G016500(AS)	POPTR_0001s05420	sp|Q9LXV0|U92A1_ARATH	UDP-glycosyltransferase 92A1 OS=Arabidopsis thaliana GN=UGT92A1 PE=2 SV=1	AT5G12890.1	| Symbols: | UDP-Glycosyltransferase superfamily protein | chr5:4069658-4071124 REVERSE LENGTH=488	LOC_Os04g42690.1	protein|UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed	IMGA|Medtr5g087620.1	UDP-glucuronosyltransferase 1-7C chr5 36976756-36978339 E EGN_Mt100125 20111014	GO:0008152|metabolic process	GO:0008194|UDP-glycosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups	NA
pt2_00545	G	G1	NA	NA	POPTR_0001s05430	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00546	A	A1S	Potri.001G016600	Potri.001G016600(AS)	POPTR_0001s05440	NA	NA	AT5G12900.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:4072151-4074445 REVERSE LENGTH=562	LOC_Os08g39740.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function GO:0005515|protein binding	GO:0005634|nucleus
pt2_00547	A	A2S	Potri.001G016700	Potri.001G016700(AS) Potri.001G016900(DS)	POPTR_0001s05450	sp|P68428|H32_WHEAT	Histone H3.2 OS=Triticum aestivum PE=1 SV=2	AT5G65360.1	| Symbols: | Histone superfamily protein | chr5:26120099-26120509 REVERSE LENGTH=136	LOC_Os04g34240.1	protein|histone H3, putative, expressed	IMGA|Medtr1g105310.1	Histone H3 chr1 31130267-31130862 F EGN_Mt100125 20111014	GO:0006334|nucleosome assembly	GO:0003677|DNA binding	GO:0000786|nucleosome GO:0005634|nucleus
pt2_00548	A	A1S	Potri.001G016800	Potri.001G016800(AS)	POPTR_0001s05460	NA	NA	AT5G12920.1	| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr5:4077917-4082585 REVERSE LENGTH=537	LOC_Os02g37856.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_00549	A	A2S	Potri.001G016900	Potri.001G016900(AS) Potri.001G016700(BS)	POPTR_0001s05470	sp|P68428|H32_WHEAT	Histone H3.2 OS=Triticum aestivum PE=1 SV=2	AT5G65360.1	| Symbols: | Histone superfamily protein | chr5:26120099-26120509 REVERSE LENGTH=136	LOC_Os11g05730.1	protein|histone H3, putative, expressed	IMGA|Medtr1g105310.1	Histone H3 chr1 31130267-31130862 F EGN_Mt100125 20111014	GO:0006334|nucleosome assembly	GO:0003677|DNA binding	GO:0000786|nucleosome GO:0005634|nucleus
pt2_00550	A	A1S	Potri.001G017000	Potri.001G017000(AS)	POPTR_0001s05480	NA	NA	AT4G12070.1	| Symbols: | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:7231941-7234272 FORWARD LENGTH=483	LOC_Os02g48640.1	protein|expressed protein	IMGA|Medtr1g105390.1	hypothetical protein chr1 31160925-31163500 E EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_00551	A	A1S	Potri.001G017100	Potri.001G017100(AS)	POPTR_0001s05490	NA	NA	AT5G12930.1	| Symbols: | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:4083155-4085222 REVERSE LENGTH=439	LOC_Os09g31350.1	protein|expressed protein	NA	NA	GO:0008150|biological_process GO:0009723|response to ethylene stimulus	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00552	A	A1S	Potri.001G017300	Potri.001G017300(AS)	POPTR_0001s05500	sp|Q9C690|BH122_ARATH	Transcription factor bHLH122 OS=Arabidopsis thaliana GN=BHLH122 PE=1 SV=1	AT1G51140.1	| Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr1:18943802-18945613 REVERSE LENGTH=379	NA	NA	IMGA|Medtr1g105280.1	Transcription factor bHLH130 chr1 31113232-31108907 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0048573|photoperiodism, flowering	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00553	G	G1	NA	NA	POPTR_0001s05510	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00554	A	A1S	Potri.001G017500	Potri.001G017500(AS)	POPTR_0001s05520	sp|Q00874|DR100_ARATH	DNA-damage-repair/toleration protein DRT100 OS=Arabidopsis thaliana GN=DRT100 PE=2 SV=2	AT3G20820.1	| Symbols: | Leucine-rich repeat (LRR) family protein | chr3:7280930-7282027 FORWARD LENGTH=365	LOC_Os08g39550.1	protein|polygalacturonase inhibitor 2 precursor, putative, expressed	IMGA|Medtr5g069580.1	Receptor protein kinase-like protein chr5 28520745-28517219 H EGN_Mt100125 20111014	GO:0006952|defense response GO:0007165|signal transduction	NA	GO:0005618|cell wall GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0009507|chloroplast GO:0016020|membrane GO:0048046|apoplast
pt2_00555	A	A2S	Potri.001G017600	Potri.001G017600(AS) Potri.T158600(DS)	POPTR_0001s05530	sp|Q9SD53|Y3720_ARATH	UPF0481 protein At3g47200 OS=Arabidopsis thaliana GN=At3g47200 PE=1 SV=1	AT4G31980.1	| Symbols: | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158), Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT5G11290.1); Has 1967 Blast hits to 1844 proteins in 183 species: Archae - 0; Bacteria - 6; Metazoa - 223; Fungi - 83; Plants - 1477; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). | chr4:15464905-15469204 FORWARD LENGTH=680	LOC_Os11g33394.2	protein|plant protein of unknown function domain containing protein, expressed	IMGA|Medtr5g016570.1	hypothetical protein chr5 5698968-5697224 E EGN_Mt100125 20111014	GO:0006865|amino acid transport GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005886|plasma membrane
pt2_00556	B	B1S	Potri.001G017900	Potri.001G017900(BS)	POPTR_0001s05540	sp|Q9SD53|Y3720_ARATH	UPF0481 protein At3g47200 OS=Arabidopsis thaliana GN=At3g47200 PE=1 SV=1	AT4G31980.1	| Symbols: | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158), Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT5G11290.1); Has 1967 Blast hits to 1844 proteins in 183 species: Archae - 0; Bacteria - 6; Metazoa - 223; Fungi - 83; Plants - 1477; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). | chr4:15464905-15469204 FORWARD LENGTH=680	LOC_Os01g21710.1	protein|plant protein of unknown function domain containing protein, expressed	IMGA|Medtr5g086340.1	hypothetical protein chr5 36305986-36307922 H EGN_Mt100125 20111014	GO:0006865|amino acid transport GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005886|plasma membrane
pt2_00557	A	A1A	Potri.001G018100	Potri.001G018100(AA)	POPTR_0001s05550	NA	NA	AT2G39725.2	| Symbols: | LYR family of Fe/S cluster biogenesis protein | chr2:16570070-16570342 FORWARD LENGTH=90	LOC_Os08g17650.1	protein|LYR motif containing protein, putative, expressed	IMGA|Medtr5g008340.1	Succinate dehydrogenase assembly factor-like protein chr5 1516073-1516441 H EGN_Mt100125 20111014	GO:0006626|protein targeting to mitochondrion	GO:0003824|catalytic activity	GO:0005739|mitochondrion
pt2_00558	A	A1S	Potri.001G018200	Potri.001G018200(AS)	POPTR_0001s05560	NA	NA	AT5G12950.1	| Symbols: | Putative glycosyl hydrolase of unknown function (DUF1680) | chr5:4093117-4096806 FORWARD LENGTH=861	LOC_Os02g10190.1	protein|DUF1680 domain containing protein, putative, expressed	IMGA|contig_56688_1.1	Unknown protein contig_56688 639-1789 H PREDN 20111014	NA	GO:0003824|catalytic activity	GO:0005576|extracellular region GO:0005773|vacuole GO:0009505|plant-type cell wall
pt2_00559	A	A1S	Potri.001G018300	Potri.001G018300(AS)	POPTR_0001s05570	sp|Q9LSF1|OXI1_ARATH	Serine/threonine-protein kinase OXI1 OS=Arabidopsis thaliana GN=OXI1 PE=1 SV=1	AT3G20830.1	| Symbols: | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein | chr3:7285024-7286250 REVERSE LENGTH=408	LOC_Os08g39460.1	protein|AGC_PVPK_like_CDK8.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed	IMGA|Medtr5g069000.1	Microtubule-associated serine/threonine-protein kinase chr5 28211794-28220768 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0009733|response to auxin stimulus GO:0009741|response to brassinosteroid stimulus	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus
pt2_00560	A	A1S	Potri.001G018400	Potri.001G018400(AS)	POPTR_0001s05580	sp|Q5YGP7|PLET2_ARATH	AP2-like ethylene-responsive transcription factor PLT2 OS=Arabidopsis thaliana GN=PLT2 PE=2 SV=1	AT1G51190.1	| Symbols: PLT2 | Integrase-type DNA-binding superfamily protein | chr1:18977517-18980305 FORWARD LENGTH=568	LOC_Os04g42570.1	protein|AP2/EREBP transcription factor BABY BOOM, putative, expressed	IMGA|Medtr5g031880.1	AP2-like ethylene-responsive transcription factor BBM chr5 13258840-13254528 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0007389|pattern specification process GO:0019827|stem cell maintenance GO:0048364|root development GO:0051302|regulation of cell division	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00561	A	A1S	Potri.001G018500	Potri.001G018500(AS)	POPTR_0001s05590	sp|Q54G07|SLMO_DICDI	Protein slowmo homolog OS=Dictyostelium discoideum GN=slmo PE=3 SV=1	AT5G13070.1	| Symbols: | MSF1-like family protein | chr5:4148216-4149062 FORWARD LENGTH=183	LOC_Os02g48670.1	protein|slowmo homolog, putative, expressed	NA	NA	NA	NA	GO:0005739|mitochondrion
pt2_00562	A	A1S	Potri.001G018600	Potri.001G018600(AS)	POPTR_0001s05600	sp|A3BDI8|SAP8_ORYSJ	Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. japonica GN=SAP8 PE=2 SV=1	AT1G51200.4	| Symbols: | A20/AN1-like zinc finger family protein | chr1:18985690-18986211 FORWARD LENGTH=173	LOC_Os06g41010.3	protein|zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed	NA	NA	GO:0007067|mitosis GO:0008150|biological_process GO:0048573|photoperiodism, flowering	GO:0003677|DNA binding GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_00563	A	A1S	Potri.001G018700	Potri.001G018700(AS)	POPTR_0001s05610	sp|Q9LT35|NEK6_ARATH	Serine/threonine-protein kinase Nek6 OS=Arabidopsis thaliana GN=NEK6 PE=2 SV=1	AT3G20860.1	| Symbols: ATNEK5, NEK5 | NIMA-related kinase 5 | chr3:7306147-7308434 FORWARD LENGTH=427	LOC_Os02g37830.1	protein|protein kinase domain containing protein, expressed	IMGA|Medtr1g071480.1	Serine/threonine protein kinase Nek2 chr1 17648833-17644700 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_00564	A	A1S	Potri.001G018800	Potri.001G018800(AS)	POPTR_0001s05620	sp|Q940Q3|ZTP29_ARATH	Zinc transporter ZTP29 OS=Arabidopsis thaliana GN=ZTP29 PE=2 SV=1	AT3G20870.1	| Symbols: ZTP29 | ZIP metal ion transporter family | chr3:7309499-7312476 REVERSE LENGTH=276	LOC_Os02g10230.1	protein|metal cation transporter, putative, expressed	NA	NA	GO:0030001|metal ion transport GO:0055085|transmembrane transport	GO:0046873|metal ion transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_00565	A	A1S	Potri.001G018900	Potri.001G018900(AS)	POPTR_0001s05630	sp|Q8VWG3|TT1_ARATH	Protein TRANSPARENT TESTA 1 OS=Arabidopsis thaliana GN=TT1 PE=2 SV=1	AT1G51220.1	| Symbols: WIP5 | WIP domain protein 5 | chr1:18989925-18992034 REVERSE LENGTH=337	LOC_Os08g39390.1	protein|ZOS8-10 - C2H2 zinc finger protein, expressed	IMGA|Medtr5g054090.1	Zinc finger-like protein chr5 21755121-21752391 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003676|nucleic acid binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_00566	A	A1S	Potri.001G019000	Potri.001G019000(AS)	POPTR_0001s05640	sp|Q9C5J8|OEP80_ARATH	Outer envelope protein 80, chloroplastic OS=Arabidopsis thaliana GN=OEP80 PE=1 SV=1	AT5G19620.1	| Symbols: EMB213, OEP80, ATOEP80, TOC75 | outer envelope protein of 80 kDa | chr5:6623323-6627641 FORWARD LENGTH=732	LOC_Os02g10260.1	protein|outer membrane protein, OMP85 family protein, expressed	NA	NA	GO:0009658|chloroplast organization GO:0009793|embryo development ending in seed dormancy GO:0010207|photosystem II assembly	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009536|plastid GO:0009941|chloroplast envelope GO:0016020|membrane GO:0019867|outer membrane
pt2_00567	A	A1S	Potri.001G019100	Potri.001G019100(AS)	POPTR_0001s05650	sp|Q9SH30|HMA5_ARATH	Putative copper-transporting ATPase HMA5 OS=Arabidopsis thaliana GN=HMA5 PE=2 SV=2	AT1G63440.1	| Symbols: HMA5 | heavy metal atpase 5 | chr1:23527655-23531109 FORWARD LENGTH=995	LOC_Os02g10290.1	protein|copper-transporting ATPase, putative, expressed	IMGA|contig_52028_1.1	Copper transporting ATPase contig_52028 7242-460 E PREDN 20111014	GO:0006754|ATP biosynthetic process GO:0006812|cation transport GO:0008152|metabolic process GO:0010043|response to zinc ion GO:0010273|detoxification of copper ion GO:0030001|metal ion transport GO:0046034|ATP metabolic process GO:0046688|response to copper ion	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0005524|ATP binding GO:0015662|ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism GO:0043682|copper-transporting ATPase activity GO:0046872|metal ion binding	GO:0005886|plasma membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_00568	D	D1S	Potri.017G070100	Potri.017G070100(DS)	POPTR_0001s05660	sp|Q8LF36|2A5T_ARATH	Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform OS=Arabidopsis thaliana GN=B'THETA PE=2 SV=2	AT1G13460.2	| Symbols: | Protein phosphatase 2A regulatory B subunit family protein | chr1:4616504-4618180 FORWARD LENGTH=492	LOC_Os03g62730.1	protein|transposon protein, putative, unclassified, expressed	IMGA|Medtr1g011460.1	Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform chr1 2355347-2358219 E EGN_Mt100125 20111014	GO:0007165|signal transduction	GO:0008601|protein phosphatase type 2A regulator activity	GO:0000159|protein phosphatase type 2A complex GO:0005634|nucleus GO:0005829|cytosol
pt2_00569	A	A1S	Potri.001G019200	Potri.001G019200(AS)	POPTR_0001s05670	NA	NA	AT1G21200.1	| Symbols: | sequence-specific DNA binding transcription factors | chr1:7421483-7422814 FORWARD LENGTH=443	LOC_Os12g06640.1	protein|homeodomain, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00570	A	A1S	Potri.001G019300	Potri.001G019300(AS)	POPTR_0001s05680	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00571	A	A1S	Potri.001G019400	Potri.001G019400(AS)	POPTR_0001s05690	sp|P25083|ADT1_SOLTU	ADP,ATP carrier protein, mitochondrial OS=Solanum tuberosum GN=ANT PE=2 SV=1	AT5G13490.2	| Symbols: AAC2 | ADP/ATP carrier 2 | chr5:4336034-4337379 FORWARD LENGTH=385	LOC_Os02g48720.2	protein|mitochondrial carrier protein, putative, expressed	IMGA|Medtr1g012030.1	Brittle 1 protein-like protein chr1 2768338-2765042 H EGN_Mt100125 20111014	GO:0006094|gluconeogenesis GO:0006612|protein targeting to membrane GO:0006810|transport GO:0006820|anion transport GO:0006862|nucleotide transport GO:0006865|amino acid transport GO:0006888|ER to Golgi vesicle-mediated transport GO:0006944|cellular membrane fusion GO:0007010|cytoskeleton organization GO:0010363|regulation of plant-type hypersensitive response GO:0010498|proteasomal protein catabolic process GO:0015696|ammonium transport GO:0015802|basic amino acid transport GO:0015865|purine nucleotide transport GO:0043069|negative regulation of programmed cell death GO:0043090|amino acid import GO:0043269|regulation of ion transport GO:0055085|transmembrane transport	GO:0005215|transporter activity GO:0005471|ATP:ADP antiporter activity GO:0005507|copper ion binding GO:0005515|protein binding	GO:0005739|mitochondrion GO:0005740|mitochondrial envelope GO:0005743|mitochondrial inner membrane GO:0005774|vacuolar membrane GO:0009507|chloroplast GO:0009941|chloroplast envelope GO:0016020|membrane
pt2_00572	A	A1S	Potri.001G019500	Potri.001G019500(AS)	POPTR_0001s05700	sp|Q9SJZ3|PP169_ARATH	Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2 SV=1	AT2G22410.1	| Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080 FORWARD LENGTH=681	LOC_Os10g26070.1	protein|pentatricopeptide, putative, expressed	IMGA|Medtr5g018690.1	Pentatricopeptide repeat-containing protein chr5 6711674-6714567 E EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005739|mitochondrion
pt2_00573	A	A1S	Potri.001G019600	Potri.001G019600(AS)	POPTR_0001s05710	sp|Q8L649|BB_ARATH	E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana GN=BB PE=1 SV=1	AT3G63530.2	| Symbols: BB, BB2 | RING/U-box superfamily protein | chr3:23456407-23457787 REVERSE LENGTH=248	LOC_Os03g07790.1	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr1g114240.2	RING finger protein chr1 33086901-33092916 F EGN_Mt100125 20111014	GO:0016567|protein ubiquitination GO:0046621|negative regulation of organ growth GO:0048437|floral organ development GO:0051865|protein autoubiquitination	GO:0004842|ubiquitin-protein ligase activity GO:0008270|zinc ion binding GO:0031624|ubiquitin conjugating enzyme binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00574	A	A1S	Potri.001G019700	Potri.001G019700(AS)	POPTR_0001s05720	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00575	B	B1S	Potri.001G019800	Potri.001G019800(BS)	POPTR_0001s05730	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00576	B	B4S	Potri.001G020100	Potri.001G020100(BS) Potri.001G020000(BS) Potri.001G019700(DS) Potri.001G019900(DS)	POPTR_0001s05740	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00577	A	A1S	Potri.001G020200	Potri.001G020200(AS)	POPTR_0001s05750	NA	NA	AT2G16770.1	| Symbols: bZIP23 | Basic-leucine zipper (bZIP) transcription factor family protein | chr2:7279859-7280817 FORWARD LENGTH=249	LOC_Os01g58760.1	protein|bZIP transcription factor domain containing protein, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0009410|response to xenobiotic stimulus GO:0010043|response to zinc ion GO:0030968|endoplasmic reticulum unfolded protein response GO:0071294|cellular response to zinc ion	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0043565|sequence-specific DNA binding GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_00578	A	A1S	Potri.001G020200	Potri.001G020200(AS)	POPTR_0001s05750	NA	NA	AT2G16770.1	| Symbols: bZIP23 | Basic-leucine zipper (bZIP) transcription factor family protein | chr2:7279859-7280817 FORWARD LENGTH=249	LOC_Os01g58760.1	protein|bZIP transcription factor domain containing protein, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0009410|response to xenobiotic stimulus GO:0010043|response to zinc ion GO:0030968|endoplasmic reticulum unfolded protein response GO:0071294|cellular response to zinc ion	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0043565|sequence-specific DNA binding GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_00579	A	A1S	Potri.001G020200	Potri.001G020200(AS)	POPTR_0001s05750	NA	NA	AT2G16770.1	| Symbols: bZIP23 | Basic-leucine zipper (bZIP) transcription factor family protein | chr2:7279859-7280817 FORWARD LENGTH=249	LOC_Os01g58760.1	protein|bZIP transcription factor domain containing protein, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent GO:0009410|response to xenobiotic stimulus GO:0010043|response to zinc ion GO:0030968|endoplasmic reticulum unfolded protein response GO:0071294|cellular response to zinc ion	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0043565|sequence-specific DNA binding GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_00580	A	A1S	Potri.001G020300	Potri.001G020300(AS)	POPTR_0001s05760	sp|Q10M00|C3H22_ORYSJ	Zinc finger CCCH domain-containing protein 22 OS=Oryza sativa subsp. japonica GN=Os03g0328900 PE=2 SV=2	AT3G51950.2	| Symbols: | Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein | chr3:19278244-19280407 REVERSE LENGTH=540	LOC_Os03g21140.2	protein|RNA-binding zinc finger protein, putative, expressed	IMGA|Medtr5g008900.1	Zinc finger CCCH domain-containing protein chr5 1751944-1756293 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0008150|biological_process	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding GO:0008270|zinc ion binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00581	A	A1S	Potri.001G020400	Potri.001G020400(AS)	POPTR_0001s05770	sp|Q766C2|NEP2_NEPGR	Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1	AT2G03200.1	| Symbols: | Eukaryotic aspartyl protease family protein | chr2:966506-967891 REVERSE LENGTH=461	LOC_Os07g34920.1	protein|aspartic proteinase nepenthesin precursor, putative, expressed	IMGA|Medtr5g044770.1	Aspartic proteinase nepenthesin-1 chr5 19234515-19233220 H EGN_Mt100125 20111014	GO:0000041|transition metal ion transport GO:0006508|proteolysis GO:0010228|vegetative to reproductive phase transition of meristem GO:0010413|glucuronoxylan metabolic process GO:0016926|protein desumoylation GO:0045492|xylan biosynthetic process GO:0050665|hydrogen peroxide biosynthetic process	GO:0004190|aspartic-type endopeptidase activity	GO:0005576|extracellular region
pt2_00582	A	A1S	Potri.001G020500	Potri.001G020500(AS)	POPTR_0001s05780	sp|Q9LQQ1|PPR20_ARATH	Pentatricopeptide repeat-containing protein At1g07740, mitochondrial OS=Arabidopsis thaliana GN=At1g07740 PE=2 SV=1	AT1G07740.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:2399117-2400496 REVERSE LENGTH=459	LOC_Os05g47510.1	protein|pentatricopeptide, putative, expressed	IMGA|Medtr5g007250.1	Pentatricopeptide repeat-containing protein chr5 1020898-1025108 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_00583	A	A1S	Potri.001G020600	Potri.001G020600(AS)	POPTR_0001s05790	sp|O22218|ACA4_ARATH	Calcium-transporting ATPase 4, plasma membrane-type OS=Arabidopsis thaliana GN=ACA4 PE=1 SV=1	AT2G41560.1	| Symbols: ACA4 | autoinhibited Ca(2+)-ATPase, isoform 4 | chr2:17332256-17337179 REVERSE LENGTH=1030	LOC_Os12g04220.1	protein|calcium-transporting ATPase, plasma membrane-type, putative, expressed	IMGA|Medtr5g015590.1	"Calcium-transporting ATPase 2, plasma membrane-type" chr5 5159662-5165001 E EGN_Mt100125 20111014	GO:0006754|ATP biosynthetic process GO:0006812|cation transport GO:0006816|calcium ion transport GO:0006882|cellular zinc ion homeostasis GO:0006970|response to osmotic stress GO:0008152|metabolic process GO:0009624|response to nematode GO:0009651|response to salt stress GO:0042742|defense response to bacterium GO:0043069|negative regulation of programmed cell death GO:0055081|anion homeostasis GO:0070588|calcium ion transmembrane transport	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0005388|calcium-transporting ATPase activity GO:0005516|calmodulin binding GO:0005524|ATP binding GO:0015662|ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism GO:0046872|metal ion binding	GO:0000325|plant-type vacuole GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0009507|chloroplast GO:0009705|plant-type vacuole membrane GO:0016020|membrane
pt2_00584	A	A1S	Potri.001G020700	Potri.001G020700(AS)	POPTR_0001s05810	NA	NA	AT5G13470.1	| Symbols: | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:4318562-4319720 FORWARD LENGTH=159	NA	NA	NA	NA	GO:0006661|phosphatidylinositol biosynthetic process GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00585	A	A1S	Potri.001G020800	Potri.001G020800(AS)	POPTR_0001s05820	sp|Q8KG76|GPDA_CHLTE	Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Chlorobium tepidum (strain ATCC 49652 / DSM 12025 / TLS) GN=gpsA PE=3 SV=1	AT2G41540.3	| Symbols: GPDHC1 | 6-phosphogluconate dehydrogenase family protein | chr2:17326801-17328654 FORWARD LENGTH=462	LOC_Os01g71280.1	protein|glycerol-3-phosphate dehydrogenase, putative, expressed	NA	NA	GO:0005975|carbohydrate metabolic process GO:0006072|glycerol-3-phosphate metabolic process GO:0009413|response to flooding GO:0046168|glycerol-3-phosphate catabolic process GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0004367|glycerol-3-phosphate dehydrogenase [NAD+] activity GO:0016491|oxidoreductase activity GO:0016614|oxidoreductase activity, acting on CH-OH group of donors GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0050662|coenzyme binding GO:0051287|NAD binding	GO:0005737|cytoplasm GO:0005829|cytosol GO:0009331|glycerol-3-phosphate dehydrogenase complex
pt2_00586	A	A1S	Potri.001G020900	Potri.001G020900(AS)	POPTR_0001s05830	sp|Q9LY71|CKX6_ARATH	Cytokinin dehydrogenase 6 OS=Arabidopsis thaliana GN=CKX6 PE=2 SV=2	AT3G63440.1	| Symbols: ATCKX6, CKX6, ATCKX7 | cytokinin oxidase/dehydrogenase 6 | chr3:23424291-23426265 FORWARD LENGTH=533	LOC_Os05g31040.1	protein|cytokinin dehydrogenase precursor, putative, expressed	IMGA|Medtr1g015410.1	Cytokinin dehydrogenase chr1 4243565-4248963 F EGN_Mt100125 20111014	GO:0009690|cytokinin metabolic process GO:0009823|cytokinin catabolic process GO:0010103|stomatal complex morphogenesis GO:0055114|oxidation-reduction process	GO:0003824|catalytic activity GO:0008762|UDP-N-acetylmuramate dehydrogenase activity GO:0016491|oxidoreductase activity GO:0016614|oxidoreductase activity, acting on CH-OH group of donors GO:0019139|cytokinin dehydrogenase activity GO:0050660|flavin adenine dinucleotide binding	GO:0005576|extracellular region
pt2_00587	A	A1S	Potri.001G021000	Potri.001G021000(AS)	POPTR_0001s05840	sp|Q8LPG9|IQD14_ARATH	Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana GN=IQD14 PE=1 SV=1	AT5G13460.1	| Symbols: IQD11 | IQ-domain 11 | chr5:4316323-4318247 FORWARD LENGTH=443	LOC_Os03g23960.1	protein|IQ calmodulin-binding motif family protein, putative, expressed	IMGA|AC225481_1.1	IQ domain-containing protein AC225481.15 5962-2486 E EGN_Mt100125 20111014	GO:0000271|polysaccharide biosynthetic process GO:0008150|biological_process	GO:0005516|calmodulin binding	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_00588	A	A1S	Potri.001G021100	Potri.001G021100(AS)	POPTR_0001s05850	NA	NA	AT3G51940.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G03990.1); Has 215 Blast hits to 164 proteins in 38 species: Archae - 0; Bacteria - 35; Metazoa - 16; Fungi - 18; Plants - 121; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). | chr3:19273708-19275157 REVERSE LENGTH=453	LOC_Os01g58700.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00589	C	C1S	Potri.001G021400	Potri.001G021400(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00590	A	A1S	Potri.001G021500	Potri.001G021500(AS)	POPTR_0001s05870	NA	NA	NA	NA	NA	NA	NA	NA	GO:0009733|response to auxin stimulus GO:0009736|cytokinin mediated signaling pathway GO:0009741|response to brassinosteroid stimulus GO:0010540|basipetal auxin transport GO:0010541|acropetal auxin transport	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00591	A	A1S	Potri.001G021600	Potri.001G021600(AS)	POPTR_0001s05880	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_00592	C	C1S	Potri.001G021700	Potri.001G021700(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00593	A	A2S	Potri.001G021800	Potri.001G021800(AS) Potri.001G022000(DS)	POPTR_0001s05900	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00594	G	G4	NA	NA	POPTR_0001s05910	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00595	A	A2S	Potri.001G021900	Potri.001G021900(AS) Potri.001G022100(BS)	POPTR_0001s05915	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00596	A	A1S	Potri.001G022000	Potri.001G022000(AS)	POPTR_0001s05930	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00597	A	A2S	Potri.001G022100	Potri.001G022100(AS) Potri.001G021900(BS)	POPTR_0001s05940	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00598	A	A1S	Potri.001G022200	Potri.001G022200(AS)	POPTR_0001s05950	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00599	A	A1S	Potri.001G022300	Potri.001G022300(AS)	POPTR_0001s05960	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00600	A	A1S	Potri.001G022400	Potri.001G022400(AS)	POPTR_0001s05970	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_00601	A	A1S	Potri.001G022500	Potri.001G022500(AS)	POPTR_0001s05980	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006661|phosphatidylinositol biosynthetic process GO:0010190|cytochrome b6f complex assembly	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0042651|thylakoid membrane
pt2_00602	G	G1	NA	NA	POPTR_0001s05990	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00603	A	A1S	Potri.001G022700	Potri.001G022700(AS)	POPTR_0001s06000	NA	NA	AT3G08550.1	| Symbols: ELD1, ABI8, KOB1 | elongation defective 1 protein / ELD1 protein | chr3:2596513-2599515 FORWARD LENGTH=533	LOC_Os01g13200.1	protein|abscisic acid insensitive 8, putative, expressed	NA	NA	GO:0006084|acetyl-CoA metabolic process GO:0009663|plasmodesma organization GO:0009737|response to abscisic acid stimulus GO:0009744|response to sucrose stimulus GO:0009749|response to glucose stimulus GO:0009750|response to fructose stimulus GO:0009826|unidimensional cell growth GO:0009831|plant-type cell wall modification involved in multidimensional cell growth GO:0016126|sterol biosynthetic process GO:0016132|brassinosteroid biosynthetic process GO:0030244|cellulose biosynthetic process GO:0048193|Golgi vesicle transport	GO:0016757|transferase activity, transferring glycosyl groups	GO:0005737|cytoplasm GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009543|chloroplast thylakoid lumen
pt2_00604	A	A2S	Potri.001G022800	Potri.001G022800(AS) Potri.009G091500(AS)	POPTR_0001s06010	sp|Q9LRR4|R13L1_ARATH	Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana GN=RPPL1 PE=2 SV=1	AT3G14470.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr3:4857940-4861104 FORWARD LENGTH=1054	LOC_Os05g41290.1	protein|disease resistance RPP13-like protein 1, putative, expressed	IMGA|Medtr5g095910.1	NB-LRR type disease resistance protein Rps1-k-2 chr5 40893619-40897389 H EGN_Mt100125 20111014	GO:0006952|defense response	GO:0043531|ADP binding	GO:0005634|nucleus
pt2_00605	A	A1S	Potri.001G022900	Potri.001G022900(AS)	POPTR_0001s06020	sp|Q8MY12|MHCKC_DICDI	Myosin heavy chain kinase C OS=Dictyostelium discoideum GN=mhkC PE=1 SV=1	AT3G51930.1	| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr3:19271672-19272919 FORWARD LENGTH=415	LOC_Os01g71780.1	protein|WD domain, G-beta repeat domain containing protein, expressed	IMGA|Medtr5g018520.1	Guanine nucleotide-binding protein subunit beta-like protein chr5 6660942-6659569 H EGN_Mt100125 20111014	NA	GO:0000166|nucleotide binding	GO:0005634|nucleus GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_00606	A	A1S	Potri.001G023000	Potri.001G023000(AS)	POPTR_0001s06030	NA	NA	AT5G18250.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:6033797-6035216 FORWARD LENGTH=133	LOC_Os01g15979.1	protein|gb protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_00607	A	A1S	Potri.001G023100	Potri.001G023100(AS)	POPTR_0001s06040	sp|Q94AR4|CID2_ARATH	Polyadenylate-binding protein-interacting protein 2 OS=Arabidopsis thaliana GN=CID2 PE=1 SV=1	AT4G14270.2	| Symbols: | Protein containing PAM2 motif which mediates interaction with the PABC domain of polyadenyl binding proteins. | chr4:8218517-8219037 FORWARD LENGTH=141	LOC_Os03g23010.4	protein|expressed protein	IMGA|Medtr5g083690.1	Polyadenylate-binding protein-interacting protein chr5 35093982-35095007 F EGN_Mt100125 20111014	GO:0006096|glycolysis GO:0006833|water transport GO:0006972|hyperosmotic response GO:0007030|Golgi organization GO:0009266|response to temperature stimulus GO:0009414|response to water deprivation GO:0009617|response to bacterium GO:0009644|response to high light intensity GO:0009646|response to absence of light GO:0009651|response to salt stress GO:0032880|regulation of protein localization GO:0042744|hydrogen peroxide catabolic process GO:0046686|response to cadmium ion	GO:0005515|protein binding	GO:0005737|cytoplasm
pt2_00608	A	A1S	Potri.001G023200	Potri.001G023200(AS)	POPTR_0001s06050	NA	NA	AT4G30880.1	| Symbols: | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr4:15035229-15035750 FORWARD LENGTH=109	LOC_Os01g58660.1	protein|LTPL29 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	IMGA|Medtr5g093780.1	hypothetical protein chr5 39906390-39907105 F EGN_Mt100125 20111014	GO:0006869|lipid transport	GO:0008289|lipid binding	GO:0005576|extracellular region
pt2_00609	A	A1S	Potri.001G023300	Potri.001G023300(AS)	POPTR_0001s06060	NA	NA	AT4G30880.1	| Symbols: | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr4:15035229-15035750 FORWARD LENGTH=109	LOC_Os01g58660.1	protein|LTPL29 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	IMGA|Medtr5g093780.1	hypothetical protein chr5 39906390-39907105 F EGN_Mt100125 20111014	GO:0006869|lipid transport	GO:0008289|lipid binding	GO:0005576|extracellular region
pt2_00610	A	A1S	Potri.001G023400	Potri.001G023400(AS)	POPTR_0001s06070	sp|Q5MAU8|PPA27_ARATH	Probable inactive purple acid phosphatase 27 OS=Arabidopsis thaliana GN=PAP27 PE=2 SV=1	AT5G50400.1	| Symbols: ATPAP27, PAP27 | purple acid phosphatase 27 | chr5:20523575-20526231 REVERSE LENGTH=611	LOC_Os01g58640.1	protein|nucleotide pyrophosphatase/phosphodiesterase, putative, expressed	IMGA|Medtr5g045600.1	U-box domain-containing protein chr5 19595084-19586387 E EGN_Mt100125 20111014	NA	GO:0003993|acid phosphatase activity GO:0004722|protein serine/threonine phosphatase activity GO:0016787|hydrolase activity GO:0046872|metal ion binding	GO:0005576|extracellular region
pt2_00611	A	A1S	Potri.001G023500	Potri.001G023500(AS)	POPTR_0001s06090	sp|Q9LPR8|SCL3_ARATH	Scarecrow-like protein 3 OS=Arabidopsis thaliana GN=SCL3 PE=2 SV=1	AT1G50420.1	| Symbols: SCL3, SCL-3 | scarecrow-like 3 | chr1:18678177-18679625 REVERSE LENGTH=482	LOC_Os01g71970.1	protein|GRAS family transcription factor containing protein, expressed	IMGA|Medtr5g009080.1	GRAS family transcription factor chr5 1849786-1848061 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009739|response to gibberellin stimulus	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00612	A	A1S	Potri.001G023600	Potri.001G023600(AS)	POPTR_0001s06100	NA	NA	AT5G49040.1	| Symbols: | Disease resistance-responsive (dirigent-like protein) family protein | chr5:19882676-19883251 REVERSE LENGTH=191	LOC_Os11g07670.1	protein|dirigent, putative, expressed	IMGA|Medtr5g096120.1	Disease resistance response protein chr5 40986916-40987485 H EGN_Mt100125 20111014	GO:0006598|polyamine catabolic process GO:0006952|defense response GO:0009698|phenylpropanoid metabolic process GO:0009807|lignan biosynthetic process GO:0042398|cellular modified amino acid biosynthetic process	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_00613	A	A1S	Potri.001G023700	Potri.001G023700(AS)	POPTR_0001s06110	NA	NA	AT5G42510.1	| Symbols: | Disease resistance-responsive (dirigent-like protein) family protein | chr5:16998268-16998816 REVERSE LENGTH=182	NA	NA	NA	NA	GO:0006952|defense response GO:0009807|lignan biosynthetic process	GO:0003674|molecular_function	GO:0005576|extracellular region GO:0005618|cell wall
pt2_00614	A	A1S	Potri.001G023800	Potri.001G023800(AS)	POPTR_0001s06120	sp|P13240|DR206_PEA	Disease resistance response protein 206 OS=Pisum sativum GN=PI206 PE=2 SV=2	AT3G13650.1	| Symbols: | Disease resistance-responsive (dirigent-like protein) family protein | chr3:4463056-4463616 FORWARD LENGTH=186	LOC_Os11g07830.1	protein|dirigent, putative, expressed	IMGA|Medtr5g096120.1	Disease resistance response protein chr5 40986916-40987485 H EGN_Mt100125 20111014	GO:0006598|polyamine catabolic process GO:0006952|defense response GO:0009698|phenylpropanoid metabolic process GO:0009807|lignan biosynthetic process GO:0042398|cellular modified amino acid biosynthetic process	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_00615	A	A1S	Potri.001G023900	Potri.001G023900(AS)	POPTR_0001s06130	NA	NA	AT1G29050.1	| Symbols: TBL38 | TRICHOME BIREFRINGENCE-LIKE 38 | chr1:10136376-10139082 REVERSE LENGTH=380	LOC_Os01g46350.1	protein| proteins of unknown function domain containing protein, expressed	IMGA|Medtr5g034810.1	hypothetical protein chr5 14683254-14687305 H EGN_Mt100125 20111014	GO:0008150|biological_process	NA	NA
pt2_00616	A	A1S	Potri.001G024000	Potri.001G024000(AS)	POPTR_0001s06140	NA	NA	AT1G34570.1	| Symbols: | Essential protein Yae1, N-terminal | chr1:12655297-12656444 REVERSE LENGTH=208	LOC_Os01g72200.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_00617	A	A2S	Potri.001G024100	Potri.001G024100(AS) Potri.003G201400(DS)	POPTR_0001s06150	NA	NA	AT2G38800.1	| Symbols: | Plant calmodulin-binding protein-related | chr2:16216999-16218837 FORWARD LENGTH=612	LOC_Os05g31690.1	protein|expressed protein	NA	NA	GO:0015996|chlorophyll catabolic process	GO:0005516|calmodulin binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00618	A	A1S	Potri.001G024200	Potri.001G024200(AS)	POPTR_0001s06160	NA	NA	AT2G38780.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 58 Blast hits to 58 proteins in 23 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). | chr2:16210864-16214110 FORWARD LENGTH=465	LOC_Os05g31680.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_00619	A	A1S	Potri.001G024300	Potri.001G024300(AS)	POPTR_0001s06170	sp|Q9C826|ABA2_ARATH	Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN=ABA2 PE=1 SV=1	AT1G52340.1	| Symbols: ABA2, SIS4, GIN1, SDR1, ISI4, SRE1, ATABA2, ATSDR1 | NAD(P)-binding Rossmann-fold superfamily protein | chr1:19489997-19491527 REVERSE LENGTH=285	LOC_Os03g59610.1	protein|oxidoreductase, short chain dehydrogenase/reductase family protein, putative, expressed	IMGA|Medtr1g007800.1	Alcohol dehydrogenase chr1 1138955-1134820 F EGN_Mt100125 20111014	GO:0006561|proline biosynthetic process GO:0008152|metabolic process GO:0009408|response to heat GO:0009414|response to water deprivation GO:0009688|abscisic acid biosynthetic process GO:0009750|response to fructose stimulus GO:0010115|regulation of abscisic acid biosynthetic process GO:0010182|sugar mediated signaling pathway	GO:0000166|nucleotide binding GO:0004022|alcohol dehydrogenase (NAD) activity GO:0010301|xanthoxin dehydrogenase activity GO:0016491|oxidoreductase activity	GO:0005829|cytosol
pt2_00620	B	B1S	Potri.001G024400	Potri.001G024400(BS)	POPTR_0001s06180	sp|O60306|AQR_HUMAN	Intron-binding protein aquarius OS=Homo sapiens GN=AQR PE=1 SV=4	AT2G38770.1	| Symbols: EMB2765 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr2:16203185-16210253 REVERSE LENGTH=1509	LOC_Os03g26960.1	protein|intron-binding protein aquarius, putative, expressed	NA	NA	NA	NA	GO:0005634|nucleus GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_00621	A	A1S	Potri.001G024500	Potri.001G024500(AS)	POPTR_0001s06190	sp|Q5PQR5|IMP4_RAT	U3 small nucleolar ribonucleoprotein protein IMP4 OS=Rattus norvegicus GN=Imp4 PE=2 SV=1	AT1G63780.1	| Symbols: IMP4 | Ribosomal RNA processing Brix domain protein | chr1:23665045-23667243 REVERSE LENGTH=294	LOC_Os08g05880.1	protein|Brix domain containing protein, putative, expressed	NA	NA	GO:0000478|endonucleolytic cleavage involved in rRNA processing GO:0001510|RNA methylation GO:0006364|rRNA processing	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005730|nucleolus GO:0005732|small nucleolar ribonucleoprotein complex GO:0015030|Cajal body GO:0016363|nuclear matrix
pt2_00622	A	A1S	Potri.001G024600	Potri.001G024600(AS)	POPTR_0001s06200	sp|Q9LM76|PUB44_ARATH	U-box domain-containing protein 44 OS=Arabidopsis thaliana GN=PUB44 PE=1 SV=1	AT1G20780.1	| Symbols: PUB44, ATPUB44, SAUL1 | senescence-associated E3 ubiquitin ligase 1 | chr1:7217812-7220609 FORWARD LENGTH=801	LOC_Os01g72000.1	protein|armadillo repeat-containing protein, putative, expressed	IMGA|contig_56658_1.1	U-box domain-containing protein contig_56658 130-4641 F PREDN 20111014	GO:0016567|protein ubiquitination	GO:0004842|ubiquitin-protein ligase activity	GO:0000151|ubiquitin ligase complex GO:0005737|cytoplasm GO:0005886|plasma membrane
pt2_00623	A	A1S	Potri.001G024800	Potri.001G024800(AS)	POPTR_0001s06210	sp|Q9SE45|ANXD3_ARATH	Annexin D3 OS=Arabidopsis thaliana GN=ANN3 PE=2 SV=2	AT2G38760.1	| Symbols: ANNAT3, ANN3 | annexin 3 | chr2:16201086-16202490 FORWARD LENGTH=321	LOC_Os05g31760.1	protein|annexin, putative, expressed	IMGA|Medtr5g063670.1	Annexin chr5 25680904-25678394 F EGN_Mt100125 20111014	GO:0009408|response to heat GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009651|response to salt stress	GO:0005509|calcium ion binding GO:0005544|calcium-dependent phospholipid binding	GO:0005773|vacuole GO:0009507|chloroplast GO:0009986|cell surface
pt2_00624	A	A1S	Potri.001G024900	Potri.001G024900(AS)	POPTR_0001s06220	sp|Q9ZVJ6|ANXD4_ARATH	Annexin D4 OS=Arabidopsis thaliana GN=ANN4 PE=2 SV=1	AT2G38750.1	| Symbols: ANNAT4 | annexin 4 | chr2:16196582-16198431 REVERSE LENGTH=319	LOC_Os05g31750.1	protein|annexin, putative, expressed	IMGA|Medtr5g063670.1	Annexin chr5 25680904-25678394 F EGN_Mt100125 20111014	GO:0006970|response to osmotic stress GO:0009408|response to heat GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009651|response to salt stress GO:0009737|response to abscisic acid stimulus	GO:0005509|calcium ion binding GO:0005544|calcium-dependent phospholipid binding	GO:0009506|plasmodesma GO:0009507|chloroplast GO:0009986|cell surface
pt2_00625	B	B1S	Potri.003G200700	Potri.003G200700(BS)	POPTR_0001s06230	sp|P51074|ANX4_FRAAN	Annexin-like protein RJ4 OS=Fragaria ananassa PE=2 SV=2	AT5G12380.1	| Symbols: ANNAT8 | annexin 8 | chr5:4009223-4010687 FORWARD LENGTH=316	LOC_Os06g11800.1	protein|annexin, putative, expressed	IMGA|Medtr5g063670.1	Annexin chr5 25680904-25678394 F EGN_Mt100125 20111014	GO:0009408|response to heat GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009651|response to salt stress	GO:0005509|calcium ion binding GO:0005544|calcium-dependent phospholipid binding	GO:0005634|nucleus
pt2_00626	B	B1S	Potri.001G025100	Potri.001G025100(BS)	POPTR_0001s06240	NA	NA	AT3G54500.1	| Symbols: | BEST Arabidopsis thaliana protein match is: dentin sialophosphoprotein-related (TAIR:AT5G64170.1); Has 183 Blast hits to 175 proteins in 44 species: Archae - 0; Bacteria - 4; Metazoa - 38; Fungi - 11; Plants - 120; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). | chr3:20175792-20178737 REVERSE LENGTH=648	LOC_Os01g31360.6	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00627	A	A1S	Potri.001G025100	Potri.001G025100(AS)	POPTR_0001s06240	NA	NA	AT3G54500.1	| Symbols: | BEST Arabidopsis thaliana protein match is: dentin sialophosphoprotein-related (TAIR:AT5G64170.1); Has 183 Blast hits to 175 proteins in 44 species: Archae - 0; Bacteria - 4; Metazoa - 38; Fungi - 11; Plants - 120; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). | chr3:20175792-20178737 REVERSE LENGTH=648	LOC_Os01g31360.6	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00628	A	A2S	Potri.001G025100	Potri.001G025100(AS) Potri.003G200600(DS)	POPTR_0001s06240	NA	NA	AT3G54500.1	| Symbols: | BEST Arabidopsis thaliana protein match is: dentin sialophosphoprotein-related (TAIR:AT5G64170.1); Has 183 Blast hits to 175 proteins in 44 species: Archae - 0; Bacteria - 4; Metazoa - 38; Fungi - 11; Plants - 120; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). | chr3:20175792-20178737 REVERSE LENGTH=648	LOC_Os01g31360.6	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00629	A	A1S	Potri.001G025100	Potri.001G025100(AS)	POPTR_0001s06240	NA	NA	AT3G54500.1	| Symbols: | BEST Arabidopsis thaliana protein match is: dentin sialophosphoprotein-related (TAIR:AT5G64170.1); Has 183 Blast hits to 175 proteins in 44 species: Archae - 0; Bacteria - 4; Metazoa - 38; Fungi - 11; Plants - 120; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). | chr3:20175792-20178737 REVERSE LENGTH=648	LOC_Os01g31360.6	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00630	A	A1S	Potri.001G025200	Potri.001G025200(AS)	POPTR_0001s06250	sp|Q9FXW4|C80B2_COPJA	Probable (S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Coptis japonica GN=CYP80B2 PE=2 SV=1	AT1G33720.1	| Symbols: CYP76C6 | cytochrome P450, family 76, subfamily C, polypeptide 6 | chr1:12220957-12223981 REVERSE LENGTH=511	LOC_Os03g14400.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g007460.1	Cytochrome P450 monooxygenase chr5 1131766-1133659 E EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005783|endoplasmic reticulum
pt2_00631	A	A1S	Potri.001G025300	Potri.001G025300(AS)	POPTR_0001s06260	sp|P62981|RS27A_SOLTU	Ubiquitin-40S ribosomal protein S27a OS=Solanum tuberosum GN=UBI3 PE=2 SV=2	AT2G47110.2	| Symbols: UBQ6 | ubiquitin 6 | chr2:19344701-19345174 FORWARD LENGTH=157	LOC_Os01g22490.1	protein|40S ribosomal protein S27a, putative, expressed	IMGA|Medtr5g033960.1	Ubiquitin chr5 14250866-14251520 F EGN_Mt100125 20111014	GO:0006412|translation GO:0006511|ubiquitin-dependent protein catabolic process GO:0042787|protein ubiquitination involved in ubiquitin-dependent protein catabolic process	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005794|Golgi apparatus GO:0005840|ribosome GO:0022627|cytosolic small ribosomal subunit
pt2_00632	A	A1S	Potri.001G025400	Potri.001G025400(AS)	POPTR_0001s06270	sp|Q7XA40|RGA3_SOLBU	Putative disease resistance protein RGA3 OS=Solanum bulbocastanum GN=RGA3 PE=2 SV=2	AT3G14470.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr3:4857940-4861104 FORWARD LENGTH=1054	LOC_Os05g41290.1	protein|disease resistance RPP13-like protein 1, putative, expressed	IMGA|Medtr5g035280.1	NBS-LRR disease resistance-like protein chr5 14922475-14918159 E EGN_Mt100125 20111014	GO:0006952|defense response GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process	GO:0005515|protein binding GO:0043531|ADP binding	GO:0005576|extracellular region
pt2_00633	A	A1S	Potri.001G025500	Potri.001G025500(AS)	POPTR_0001s06280	sp|A8XGH1|RPAB1_CAEBR	DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Caenorhabditis briggsae GN=rpb-5 PE=3 SV=1	AT3G54490.1	| Symbols: RPB5E | RNA polymerase II fifth largest subunit, E | chr3:20173673-20175297 FORWARD LENGTH=233	LOC_Os12g04510.1	protein|DNA-directed RNA polymerases I, II, and III subunit RPABC1, putative, expressed	IMGA|Medtr5g005470.1	"DNA-directed RNA polymerases I, II, and III subunit RPABC1" chr5 226625-231507 E EGN_Mt100125 20111014	GO:0006351|transcription, DNA-dependent	GO:0003677|DNA binding GO:0003899|DNA-directed RNA polymerase activity	GO:0005634|nucleus
pt2_00634	A	A2S	Potri.001G025600	Potri.001G025600(AS) Potri.T153900(BS)	POPTR_0001s06290	sp|Q94FT2|SKIP5_ARATH	F-box protein SKIP5 OS=Arabidopsis thaliana GN=SKIP5 PE=1 SV=1	AT3G54480.1	| Symbols: SKIP5, SKP5 | SKP1/ASK-interacting protein 5 | chr3:20170883-20173325 REVERSE LENGTH=274	LOC_Os07g46555.1	protein|F-box domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_00635	A	A2S	Potri.001G025700	Potri.001G025700(AS) Potri.T154000(BS)	POPTR_0001s06300	sp|Q9SCV5|BGAL7_ARATH	Beta-galactosidase 7 OS=Arabidopsis thaliana GN=BGAL7 PE=2 SV=2	AT5G20710.1	| Symbols: BGAL7 | beta-galactosidase 7 | chr5:7010536-7013994 FORWARD LENGTH=826	LOC_Os01g34920.1	protein|beta-galactosidase precursor, putative, expressed	IMGA|Medtr5g024080.1	Beta-galactosidase chr5 9385294-9387714 H EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0005990|lactose catabolic process GO:0019513|lactose catabolic process, using glucoside 3-dehydrogenase GO:0019515|lactose catabolic process via UDP-galactose	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0004565|beta-galactosidase activity GO:0030246|carbohydrate binding GO:0043169|cation binding	GO:0005576|extracellular region
pt2_00636	A	A1S	Potri.001G025800	Potri.001G025800(AS)	POPTR_0001s06310	sp|Q9C6W4|BGA15_ARATH	Beta-galactosidase 15 OS=Arabidopsis thaliana GN=BGAL15 PE=2 SV=1	AT5G20710.1	| Symbols: BGAL7 | beta-galactosidase 7 | chr5:7010536-7013994 FORWARD LENGTH=826	LOC_Os01g34920.1	protein|beta-galactosidase precursor, putative, expressed	IMGA|Medtr5g024080.1	Beta-galactosidase chr5 9385294-9387714 H EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0005990|lactose catabolic process GO:0019513|lactose catabolic process, using glucoside 3-dehydrogenase GO:0019515|lactose catabolic process via UDP-galactose	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0004565|beta-galactosidase activity GO:0030246|carbohydrate binding GO:0043169|cation binding	GO:0005576|extracellular region
pt2_00637	A	A1S	Potri.001G025900	Potri.001G025900(AS)	POPTR_0001s06320	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00638	A	A1S	Potri.001G026000	Potri.001G026000(AS)	POPTR_0001s06330	NA	NA	AT3G14180.1	| Symbols: | sequence-specific DNA binding transcription factors | chr3:4707290-4708621 REVERSE LENGTH=443	LOC_Os04g36790.1	protein|transcription factor like protein, putative, expressed	IMGA|contig_83346_1.1	Transcription regulation protein contig_83346 3217-606 E PREDN 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009793|embryo development ending in seed dormancy GO:0010431|seed maturation GO:0043687|post-translational protein modification GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00639	A	A1S	Potri.001G026100	Potri.001G026100(AS)	POPTR_0001s06340	sp|Q54EY2|EI2BB_DICDI	Translation initiation factor eIF-2B subunit beta OS=Dictyostelium discoideum GN=eif2b2 PE=3 SV=1	AT3G07300.3	| Symbols: | NagB/RpiA/CoA transferase-like superfamily protein | chr3:2324967-2327380 REVERSE LENGTH=409	LOC_Os10g25320.1	protein|initiation factor 2 subunit family domain containing protein, expressed	IMGA|Medtr5g031790.1	Translation initiation factor eIF-2B subunit beta chr5 13213079-13204458 E EGN_Mt100125 20111014	GO:0006413|translational initiation GO:0006446|regulation of translational initiation GO:0044237|cellular metabolic process GO:0050790|regulation of catalytic activity	GO:0003743|translation initiation factor activity GO:0005085|guanyl-nucleotide exchange factor activity GO:0005525|GTP binding	GO:0005634|nucleus GO:0005851|eukaryotic translation initiation factor 2B complex
pt2_00640	A	A1S	Potri.001G026200	Potri.001G026200(AS)	POPTR_0001s06350	sp|Q8S3N1|SINA5_ARATH	E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana GN=SINAT5 PE=1 SV=2	AT3G61790.1	| Symbols: | Protein with RING/U-box and TRAF-like domains | chr3:22871974-22873543 REVERSE LENGTH=326	LOC_Os07g46560.1	protein|seven in absentia protein family domain containing protein, expressed	IMGA|Medtr5g076720.1	Ubiquitin chr5 31737740-31741388 H EGN_Mt100125 20111014	GO:0006511|ubiquitin-dependent protein catabolic process GO:0007275|multicellular organismal development GO:0016567|protein ubiquitination	GO:0004842|ubiquitin-protein ligase activity GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_00641	A	A2S	Potri.001G026300	Potri.001G026300(AS) Potri.003G198500(DS)	POPTR_0001s06360	sp|Q42586|UMPS_ARATH	Uridine 5'-monophosphate synthase OS=Arabidopsis thaliana GN=PYRE-F PE=2 SV=2	AT3G54470.1	| Symbols: | uridine 5'-monophosphate synthase / UMP synthase (PYRE-F) (UMPS) | chr3:20168285-20170245 REVERSE LENGTH=476	LOC_Os01g72240.1	protein|uridine 5-monophosphate synthase, putative, expressed	IMGA|AC225458_1.1	Orotidine 5'-phosphate decarboxylase AC225458.11 5300-3126 H EGN_Mt100125 20111014	GO:0006207|'de novo' pyrimidine nucleobase biosynthetic process GO:0006221|pyrimidine nucleotide biosynthetic process GO:0008152|metabolic process GO:0009116|nucleoside metabolic process GO:0009220|pyrimidine ribonucleotide biosynthetic process GO:0016036|cellular response to phosphate starvation GO:0044205|'de novo' UMP biosynthetic process GO:0046686|response to cadmium ion	GO:0003824|catalytic activity GO:0004588|orotate phosphoribosyltransferase activity GO:0004590|orotidine-5'-phosphate decarboxylase activity	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_00642	A	A1S	Potri.001G026400	Potri.001G026400(AS)	POPTR_0001s06370	sp|Q8L7A4|AGD11_ARATH	Probable ADP-ribosylation factor GTPase-activating protein AGD11 OS=Arabidopsis thaliana GN=AGD11 PE=2 SV=1	AT3G07940.1	| Symbols: | Calcium-dependent ARF-type GTPase activating protein family | chr3:2529542-2531368 FORWARD LENGTH=385	LOC_Os01g72230.1	protein|stromal membrane-associated protein, putative, expressed	IMGA|contig_14696_1.1	C2 domain-containing protein-like protein contig_14696 1703-414 E PREDN 20111014	GO:0032312|regulation of ARF GTPase activity	GO:0008060|ARF GTPase activator activity GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_00643	A	A2S	Potri.001G026500	Potri.001G026500(AS) Potri.003G198200(DS)	POPTR_0001s06380	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006796|phosphate-containing compound metabolic process	NA	NA
pt2_00644	A	A2S	Potri.001G026600	Potri.001G026600(AS) Potri.003G198100(DS)	POPTR_0001s06390	sp|Q9FLE8|Y5986_ARATH	Uncharacterized protein At5g39865 OS=Arabidopsis thaliana GN=At5g39865 PE=1 SV=1	AT5G13810.1	| Symbols: | Glutaredoxin family protein | chr5:4455769-4456593 FORWARD LENGTH=274	LOC_Os03g24030.1	protein|glutaredoxin, putative, expressed	IMGA|Medtr5g083110.1	hypothetical protein chr5 34849068-34848285 E EGN_Mt100125 20111014	GO:0045454|cell redox homeostasis	GO:0009055|electron carrier activity GO:0015035|protein disulfide oxidoreductase activity	GO:0005634|nucleus
pt2_00645	A	A1S	Potri.001G026700	Potri.001G026700(AS)	POPTR_0001s06400	sp|Q8GWZ6|SRR1_ARATH	Protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Arabidopsis thaliana GN=SRR1 PE=2 SV=2	AT5G59560.2	| Symbols: SRR1 | sensitivity to red light reduced protein (SRR1) | chr5:24000747-24001574 REVERSE LENGTH=275	LOC_Os05g02690.1	protein|sensitivity to red light reduced protein 1, putative, expressed	NA	NA	GO:0007623|circadian rhythm GO:0009585|red, far-red light phototransduction GO:0010017|red or far-red light signaling pathway GO:0042752|regulation of circadian rhythm	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_00646	A	A1S	Potri.001G026800	Potri.001G026800(AS)	POPTR_0001s06410	sp|Q6NLV4|FY_ARATH	Flowering time control protein FY OS=Arabidopsis thaliana GN=FY PE=1 SV=1	AT5G13480.1	| Symbols: FY | Transducin/WD40 repeat-like superfamily protein | chr5:4326638-4331557 REVERSE LENGTH=647	LOC_Os01g72220.1	protein|WD domain, G-beta repeat domain containing protein, expressed	IMGA|contig_53197_1.1	Wd-repeat protein contig_53197 137-4865 E PREDN 20111014	GO:0000398|mRNA splicing, via spliceosome GO:0006355|regulation of transcription, DNA-dependent GO:0006396|RNA processing GO:0006397|mRNA processing GO:0006406|mRNA export from nucleus GO:0006470|protein dephosphorylation GO:0007062|sister chromatid cohesion GO:0009640|photomorphogenesis GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009880|embryonic pattern specification GO:0009909|regulation of flower development GO:0009933|meristem structural organization GO:0010072|primary shoot apical meristem specification GO:0010074|maintenance of meristem identity GO:0010162|seed dormancy process GO:0010182|sugar mediated signaling pathway GO:0010228|vegetative to reproductive phase transition of meristem GO:0010431|seed maturation GO:0010564|regulation of cell cycle process GO:0016567|protein ubiquitination GO:0016570|histone modification GO:0019915|lipid storage GO:0030422|production of siRNA involved in RNA interference GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0043687|post-translational protein modification GO:0045595|regulation of cell differentiation GO:0045893|positive regulation of transcription, DNA-dependent GO:0048366|leaf development GO:0048449|floral organ formation GO:0048825|cotyledon development GO:0050826|response to freezing	GO:0005515|protein binding	GO:0005634|nucleus GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_00647	A	A1S	Potri.001G026900	Potri.001G026900(AS)	POPTR_0001s06420	sp|Q15751|HERC1_HUMAN	Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1 PE=1 SV=2	AT5G19420.2	| Symbols: | Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain | chr5:6547945-6552981 REVERSE LENGTH=1139	LOC_Os05g31920.1	protein|FYVE zinc finger domain containing protein, expressed	IMGA|Medtr5g089900.1	Lateral signaling target protein-like protein chr5 38066312-38075364 E EGN_Mt100125 20111014	GO:0000956|nuclear-transcribed mRNA catabolic process	GO:0003682|chromatin binding GO:0005543|phospholipid binding GO:0008270|zinc ion binding GO:0008536|Ran GTPase binding GO:0046872|metal ion binding	GO:0005737|cytoplasm
pt2_00648	D	D1S	Potri.001G027000	Potri.001G027000(DS)	POPTR_0001s06430	sp|O80365|ARR8_ARATH	Two-component response regulator ARR8 OS=Arabidopsis thaliana GN=ARR8 PE=1 SV=1	AT2G41310.1	| Symbols: ATRR3, ARR8, RR3 | response regulator 3 | chr2:17222280-17223536 FORWARD LENGTH=225	LOC_Os11g04720.2	protein|OsRR10 type-A response regulator, expressed	IMGA|Medtr5g036480.1	Two-component response regulator ARR3 chr5 15492273-15493675 F EGN_Mt100125 20111014	GO:0000160|two-component signal transduction system (phosphorelay) GO:0006355|regulation of transcription, DNA-dependent GO:0007623|circadian rhythm GO:0009735|response to cytokinin stimulus GO:0009736|cytokinin mediated signaling pathway GO:0009740|gibberellic acid mediated signaling pathway GO:0010162|seed dormancy process	GO:0000156|two-component response regulator activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_00649	A	A1S	Potri.001G027100	Potri.001G027100(AS)	POPTR_0001s06440	sp|Q9M1I2|PTR46_ARATH	Probable peptide/nitrate transporter At3g54450 OS=Arabidopsis thaliana GN=At3g54450 PE=2 SV=1	AT3G54450.1	| Symbols: | Major facilitator superfamily protein | chr3:20158534-20161937 FORWARD LENGTH=555	LOC_Os01g04950.2	protein|peptide transporter PTR2, putative, expressed	IMGA|Medtr1g042310.1	Peptide transporter PTR3-A chr1 12093187-12087948 E EGN_Mt100125 20111014	GO:0006857|oligopeptide transport	GO:0005215|transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_00650	A	A1S	Potri.T148900	Potri.T148900(AS)	POPTR_0001s06450	sp|Q5D869|NRPE1_ARATH	DNA-directed RNA polymerase E subunit 1 OS=Arabidopsis thaliana GN=NRPE1 PE=1 SV=1	AT2G40030.1	| Symbols: NRPD1B, DRD3, ATNRPD1B, DMS5, NRPE1 | nuclear RNA polymerase D1B | chr2:16715089-16723406 FORWARD LENGTH=1976	LOC_Os02g05880.1	protein|RNA polymerase Rpb1, domain 2 family protein, expressed	IMGA|Medtr5g011000.1	DNA-directed RNA polymerase subunit beta chr5 2818055-2831436 E EGN_Mt100125 20111014	GO:0000724|double-strand break repair via homologous recombination GO:0006261|DNA-dependent DNA replication GO:0006275|regulation of DNA replication GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0006351|transcription, DNA-dependent GO:0006354|DNA-dependent transcription, elongation GO:0009555|pollen development GO:0016444|somatic cell DNA recombination GO:0016568|chromatin modification GO:0030422|production of siRNA involved in RNA interference GO:0031047|gene silencing by RNA GO:0035194|posttranscriptional gene silencing by RNA GO:0048451|petal formation GO:0048453|sepal formation GO:0051567|histone H3-K9 methylation GO:0051726|regulation of cell cycle	GO:0003677|DNA binding GO:0003899|DNA-directed RNA polymerase activity GO:0005515|protein binding	GO:0000418|DNA-directed RNA polymerase IV complex GO:0000419|DNA-directed RNA polymerase V complex GO:0005634|nucleus GO:0005730|nucleolus GO:0016604|nuclear body GO:0030880|RNA polymerase complex
pt2_00651	A	A1S	Potri.001G027200	Potri.001G027200(AS)	POPTR_0001s06460	sp|Q5D869|NRPE1_ARATH	DNA-directed RNA polymerase E subunit 1 OS=Arabidopsis thaliana GN=NRPE1 PE=1 SV=1	AT2G40030.1	| Symbols: NRPD1B, DRD3, ATNRPD1B, DMS5, NRPE1 | nuclear RNA polymerase D1B | chr2:16715089-16723406 FORWARD LENGTH=1976	LOC_Os02g05880.1	protein|RNA polymerase Rpb1, domain 2 family protein, expressed	NA	NA	GO:0000724|double-strand break repair via homologous recombination GO:0006261|DNA-dependent DNA replication GO:0006275|regulation of DNA replication GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0006351|transcription, DNA-dependent GO:0006354|DNA-dependent transcription, elongation GO:0009555|pollen development GO:0016444|somatic cell DNA recombination GO:0016568|chromatin modification GO:0030422|production of siRNA involved in RNA interference GO:0031047|gene silencing by RNA GO:0035194|posttranscriptional gene silencing by RNA GO:0048451|petal formation GO:0048453|sepal formation GO:0051567|histone H3-K9 methylation GO:0051726|regulation of cell cycle	GO:0003677|DNA binding GO:0003899|DNA-directed RNA polymerase activity GO:0005515|protein binding	GO:0000418|DNA-directed RNA polymerase IV complex GO:0000419|DNA-directed RNA polymerase V complex GO:0005634|nucleus GO:0005730|nucleolus GO:0016604|nuclear body GO:0030880|RNA polymerase complex
pt2_00652	A	A1S	Potri.001G027400	Potri.001G027400(AS)	POPTR_0001s06470	sp|A5F5U6|BGAL_VIBC3	Beta-galactosidase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=lacZ PE=3 SV=2	AT3G54440.1	| Symbols: | glycoside hydrolase family 2 protein | chr3:20148494-20157019 REVERSE LENGTH=1107	LOC_Os01g72340.1	protein|beta-galactosidase, putative, expressed	NA	NA	GO:0005975|carbohydrate metabolic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0004565|beta-galactosidase activity GO:0030246|carbohydrate binding GO:0043169|cation binding	GO:0009341|beta-galactosidase complex GO:0009507|chloroplast
pt2_00653	C	C1S	Potri.001G027500	Potri.001G027500(CS)	sp|Q9FRS6|PXL1_ARATH	Leucine-rich repeat receptor-like protein kinase PXL1 OS=Arabidopsis thaliana GN=PXL1 PE=2 SV=1	AT2G34930.1	| Symbols: | disease resistance family protein / LRR family protein | chr2:14737169-14739886 REVERSE LENGTH=905	LOC_Os10g03100.1	protein|Cf2/Cf5 disease resistance protein, putative, expressed	IMGA|Medtr5g069580.1	Receptor protein kinase-like protein chr5 28520745-28517219 H EGN_Mt100125 20111014	GO:0002237|response to molecule of bacterial origin GO:0006468|protein phosphorylation GO:0007165|signal transduction GO:0010067|procambium histogenesis GO:0010103|stomatal complex morphogenesis GO:0048443|stamen development	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_00654	A	A1S	Potri.001G027600	Potri.001G027600(AS)	POPTR_0001s06490	NA	NA	NA	NA	LOC_Os01g16620.5	protein|expressed protein	NA	NA	NA	NA	NA
pt2_00655	A	A1S	Potri.001G027700	Potri.001G027700(AS)	POPTR_0001s06500	NA	NA	AT5G12330.1	| Symbols: LRP1 | Lateral root primordium (LRP) protein-related | chr5:3987677-3989074 REVERSE LENGTH=320	LOC_Os01g72490.1	protein|LRP1, putative, expressed	IMGA|Medtr5g089750.1	Short internode related sequence chr5 37981788-37979155 E EGN_Mt100125 20111014	GO:0007155|cell adhesion GO:0009733|response to auxin stimulus GO:0010090|trichome morphogenesis GO:0045010|actin nucleation GO:0048364|root development GO:0048765|root hair cell differentiation GO:0071555|cell wall organization	GO:0042803|protein homodimerization activity	GO:0005575|cellular_component
pt2_00656	A	A1S	Potri.001G027800	Potri.001G027800(AS)	POPTR_0001s06510	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00657	A	A1S	Potri.001G027900	Potri.001G027900(AS)	POPTR_0001s06520	sp|Q9SFB8|PI5K6_ARATH	Phosphatidylinositol 4-phosphate 5-kinase 6 OS=Arabidopsis thaliana GN=PIP5K6 PE=2 SV=1	AT3G07960.1	| Symbols: | Phosphatidylinositol-4-phosphate 5-kinase family protein | chr3:2535274-2538090 FORWARD LENGTH=715	LOC_Os07g46490.1	protein|phosphatidylinositol-4-phosphate 5-kinase, putative, expressed	IMGA|contig_81106_1.1	Phosphatidylinositol-4-phosphate 5-kinase contig_81106 300-836 H PREDN 20111014	GO:0006499|N-terminal protein myristoylation GO:0009827|plant-type cell wall modification GO:0009860|pollen tube growth GO:0046488|phosphatidylinositol metabolic process GO:0048610|cellular process involved in reproduction GO:0048868|pollen tube development GO:0072583|clathrin-mediated endocytosis	GO:0005524|ATP binding GO:0016307|phosphatidylinositol phosphate kinase activity GO:0016308|1-phosphatidylinositol-4-phosphate 5-kinase activity	GO:0005634|nucleus GO:0016324|apical plasma membrane GO:0090406|pollen tube
pt2_00658	A	A2S	Potri.001G028000	Potri.001G028000(AS) Potri.003G195700(DS)	POPTR_0001s06530	sp|Q9LK88|NQR_ARATH	NADPH:quinone oxidoreductase OS=Arabidopsis thaliana GN=NQR PE=1 SV=1	AT3G27890.1	| Symbols: NQR | NADPH:quinone oxidoreductase | chr3:10350807-10351938 REVERSE LENGTH=196	LOC_Os01g72430.1	protein|NADPH quinone oxidoreductase, putative, expressed	NA	NA	GO:0000165|MAPK cascade GO:0002831|regulation of response to biotic stimulus GO:0006096|glycolysis GO:0006612|protein targeting to membrane GO:0006833|water transport GO:0006970|response to osmotic stress GO:0006972|hyperosmotic response GO:0007030|Golgi organization GO:0009266|response to temperature stimulus GO:0009595|detection of biotic stimulus GO:0009651|response to salt stress GO:0009697|salicylic acid biosynthetic process GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010167|response to nitrate GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0015706|nitrate transport GO:0016045|detection of bacterium GO:0031347|regulation of defense response GO:0031348|negative regulation of defense response GO:0042742|defense response to bacterium GO:0043900|regulation of multi-organism process GO:0046686|response to cadmium ion GO:0050776|regulation of immune response GO:0050832|defense response to fungus	GO:0008752|FMN reductase activity	GO:0005829|cytosol GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_00659	A	A1A	Potri.001G028100	Potri.001G028100(AA)	POPTR_0001s06540	NA	NA	AT5G13500.3	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25265.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr5:4338676-4340827 FORWARD LENGTH=358	LOC_Os05g32060.1	protein|expressed protein	IMGA|Medtr5g089520.1	hypothetical protein chr5 37879484-37872834 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0016757|transferase activity, transferring glycosyl groups	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_00660	A	A1S	Potri.001G028100	Potri.001G028100(AS)	POPTR_0001s06550	NA	NA	AT5G13500.3	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25265.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr5:4338676-4340827 FORWARD LENGTH=358	LOC_Os05g32060.1	protein|expressed protein	IMGA|Medtr5g089520.1	hypothetical protein chr5 37879484-37872834 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0016757|transferase activity, transferring glycosyl groups	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_00661	A	A2S	Potri.001G028200	Potri.001G028200(AS) Potri.003G195500(DS)	POPTR_0001s06560	sp|Q9LS40|ASPG1_ARATH	Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1	AT3G54400.1	| Symbols: | Eukaryotic aspartyl protease family protein | chr3:20140291-20142599 REVERSE LENGTH=425	LOC_Os07g46480.1	protein|eukaryotic aspartyl protease domain containing protein, expressed	IMGA|contig_51649_1.1	Aspartic proteinase nepenthesin-1 contig_51649 769-2767 E PREDN 20111014	GO:0006508|proteolysis GO:0019344|cysteine biosynthetic process	GO:0004190|aspartic-type endopeptidase activity	GO:0005576|extracellular region GO:0005618|cell wall GO:0009505|plant-type cell wall GO:0009507|chloroplast GO:0048046|apoplast
pt2_00662	A	A1S	Potri.001G028200	Potri.001G028200(AS)	POPTR_0001s06560	sp|Q9LS40|ASPG1_ARATH	Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1	AT3G54400.1	| Symbols: | Eukaryotic aspartyl protease family protein | chr3:20140291-20142599 REVERSE LENGTH=425	LOC_Os07g46480.1	protein|eukaryotic aspartyl protease domain containing protein, expressed	IMGA|contig_51649_1.1	Aspartic proteinase nepenthesin-1 contig_51649 769-2767 E PREDN 20111014	GO:0006508|proteolysis GO:0019344|cysteine biosynthetic process	GO:0004190|aspartic-type endopeptidase activity	GO:0005576|extracellular region GO:0005618|cell wall GO:0009505|plant-type cell wall GO:0009507|chloroplast GO:0048046|apoplast
pt2_00663	A	A1S	Potri.001G028300	Potri.001G028300(AS)	POPTR_0001s06570	sp|O22193|PUB4_ARATH	U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4 PE=1 SV=3	AT1G08315.1	| Symbols: | ARM repeat superfamily protein | chr1:2620500-2621477 REVERSE LENGTH=325	LOC_Os01g72600.1	protein|spotted leaf 11, putative, expressed	IMGA|Medtr5g083030.1	U-box domain-containing protein chr5 34808238-34811295 E EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_00664	A	A1S	Potri.001G028400	Potri.001G028400(AS)	POPTR_0001s06580	NA	NA	AT3G54390.1	| Symbols: | sequence-specific DNA binding transcription factors | chr3:20137912-20138863 REVERSE LENGTH=296	LOC_Os09g38570.1	protein|transcription factor like protein, putative, expressed	IMGA|Medtr1g061600.1	Uridylate kinase chr1 15716787-15712368 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00665	A	A1S	Potri.001G028500	Potri.001G028500(AS)	POPTR_0001s06590	sp|Q9M7X9|CITRX_ARATH	Thioredoxin-like protein CITRX, chloroplastic OS=Arabidopsis thaliana GN=At3g06730 PE=1 SV=1	AT3G06730.1	| Symbols: TRX P, TRX z | Thioredoxin z | chr3:2124276-2125845 FORWARD LENGTH=183	LOC_Os08g29110.1	protein|thioredoxin, putative, expressed	IMGA|Medtr1g114290.1	Thioredoxin-X chr1 33117040-33114885 F EGN_Mt100125 20111014	GO:0006364|rRNA processing GO:0006399|tRNA metabolic process GO:0006662|glycerol ether metabolic process GO:0009657|plastid organization GO:0009658|chloroplast organization GO:0042793|transcription from plastid promoter GO:0045036|protein targeting to chloroplast GO:0045454|cell redox homeostasis GO:0045893|positive regulation of transcription, DNA-dependent	GO:0009055|electron carrier activity GO:0015035|protein disulfide oxidoreductase activity GO:0047134|protein-disulfide reductase activity	GO:0009295|nucleoid GO:0009507|chloroplast GO:0009579|thylakoid
pt2_00666	A	A1S	Potri.001G028600	Potri.001G028600(AS)	POPTR_0001s06600	sp|Q9FSB8|CHS2_RUTGR	Chalcone synthase 2 OS=Ruta graveolens GN=CHS2 PE=2 SV=1	AT5G13930.1	| Symbols: CHS, TT4, ATCHS | Chalcone and stilbene synthase family protein | chr5:4488762-4490035 FORWARD LENGTH=395	LOC_Os11g32650.1	protein|chalcone synthase, putative, expressed	IMGA|Medtr1g098150.1	Chalcone synthase chr1 28104343-28105634 H EGN_Mt100125 20111014	GO:0006979|response to oxidative stress GO:0008152|metabolic process GO:0009058|biosynthetic process GO:0009411|response to UV GO:0009611|response to wounding GO:0009629|response to gravity GO:0009715|chalcone biosynthetic process GO:0009718|anthocyanin-containing compound biosynthetic process GO:0009733|response to auxin stimulus GO:0009744|response to sucrose stimulus GO:0009753|response to jasmonic acid stimulus GO:0009813|flavonoid biosynthetic process GO:0009926|auxin polar transport GO:0010224|response to UV-B GO:0031540|regulation of anthocyanin biosynthetic process	GO:0003824|catalytic activity GO:0005515|protein binding GO:0016210|naringenin-chalcone synthase activity GO:0016746|transferase activity, transferring acyl groups GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005783|endoplasmic reticulum GO:0009705|plant-type vacuole membrane
pt2_00667	A	A1S	Potri.001G028800	Potri.001G028800(AS)	POPTR_0001s06610	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00668	A	A2S	Potri.001G028900	Potri.001G028900(AS) Potri.003G195000(DS)	POPTR_0001s06620	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00669	A	A1S	Potri.001G029000	Potri.001G029000(AS)	POPTR_0001s06630	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00670	B	B1S	Potri.001G029000	Potri.001G029000(BS)	POPTR_0001s06630	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00671	B	B1S	Potri.001G029200	Potri.001G029200(BS)	POPTR_0001s06640	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00672	A	A1S	Potri.001G029300	Potri.001G029300(AS)	POPTR_0001s06650	sp|Q9LRR4|R13L1_ARATH	Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana GN=RPPL1 PE=2 SV=1	AT3G14470.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr3:4857940-4861104 FORWARD LENGTH=1054	LOC_Os05g41290.1	protein|disease resistance RPP13-like protein 1, putative, expressed	IMGA|Medtr5g095910.1	NB-LRR type disease resistance protein Rps1-k-2 chr5 40893619-40897389 H EGN_Mt100125 20111014	GO:0006952|defense response	GO:0043531|ADP binding	GO:0005634|nucleus
pt2_00673	A	A1S	Potri.001G029400	Potri.001G029400(AS)	POPTR_0001s06660	NA	NA	AT5G07900.1	| Symbols: | Mitochondrial transcription termination factor family protein | chr5:2520188-2521405 FORWARD LENGTH=405	LOC_Os07g24090.1	protein|mTERF domain containing protein, expressed	IMGA|Medtr5g068860.1	mTERF family protein chr5 28178153-28176173 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0016020|membrane
pt2_00674	A	A2S	Potri.001G029500	Potri.001G029500(AS) Potri.003G194900(DS)	POPTR_0001s06670	sp|Q9LHK1|NUD16_ARATH	Nudix hydrolase 16, mitochondrial OS=Arabidopsis thaliana GN=NUDT16 PE=2 SV=1	AT3G12600.1	| Symbols: atnudt16, NUDT16 | nudix hydrolase homolog 16 | chr3:4004809-4005995 FORWARD LENGTH=180	LOC_Os03g59580.1	protein|hydrolase, NUDIX family, domain containing protein, expressed	IMGA|Medtr5g078020.1	Nudix hydrolase chr5 32317324-32319991 F EGN_Mt100125 20111014	NA	GO:0016787|hydrolase activity	GO:0005739|mitochondrion
pt2_00675	A	A1S	Potri.001G029600	Potri.001G029600(AS)	POPTR_0001s06680	sp|Q9FY48|KEG_ARATH	E3 ubiquitin-protein ligase KEG OS=Arabidopsis thaliana GN=KEG PE=1 SV=2	AT5G13530.1	| Symbols: KEG | protein kinases;ubiquitin-protein ligases | chr5:4345618-4354369 FORWARD LENGTH=1625	LOC_Os05g32570.1	protein|RING E3 ligase protein, putative, expressed	IMGA|Medtr1g012610.1	G protein-coupled receptor kinase chr1 3001173-3003743 F EGN_Mt100125 20111014	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0006468|protein phosphorylation GO:0006952|defense response GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009788|negative regulation of abscisic acid mediated signaling pathway GO:0016567|protein ubiquitination GO:0048589|developmental growth	GO:0004672|protein kinase activity GO:0004713|protein tyrosine kinase activity GO:0004842|ubiquitin-protein ligase activity GO:0005515|protein binding GO:0005524|ATP binding GO:0008270|zinc ion binding GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0043621|protein self-association	GO:0005737|cytoplasm GO:0005769|early endosome GO:0005802|trans-Golgi network
pt2_00676	C	C1S	Potri.001G029700	Potri.001G029700(CS)	NA	NA	NA	NA	NA	NA	NA	NA	GO:0000165|MAPK cascade GO:0006995|cellular response to nitrogen starvation GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process GO:0009814|defense response, incompatible interaction GO:0009816|defense response to bacterium, incompatible interaction GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0010310|regulation of hydrogen peroxide metabolic process GO:0031347|regulation of defense response GO:0031348|negative regulation of defense response GO:0042742|defense response to bacterium GO:0045088|regulation of innate immune response GO:0050832|defense response to fungus GO:0071482|cellular response to light stimulus	GO:0005515|protein binding	GO:0005634|nucleus GO:0009507|chloroplast
pt2_00677	A	A1S	Potri.001G029800	Potri.001G029800(AS)	POPTR_0001s06700	sp|O24160|TGA21_TOBAC	TGACG-sequence-specific DNA-binding protein TGA-2.1 OS=Nicotiana tabacum GN=TGA21 PE=1 SV=1	AT3G12250.2	| Symbols: TGA6, BZIP45 | TGACG motif-binding factor 6 | chr3:3906351-3908583 FORWARD LENGTH=330	LOC_Os03g20310.3	protein|transcription factor HBP-1b, putative, expressed	IMGA|Medtr5g054900.1	BZIP transcription factor chr5 22066097-22069260 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009410|response to xenobiotic stimulus GO:0009617|response to bacterium GO:0009627|systemic acquired resistance GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0030968|endoplasmic reticulum unfolded protein response	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_00678	A	A1S	Potri.001G029900	Potri.001G029900(AS)	POPTR_0001s06710	sp|Q9LHI0|NDUA6_ARATH	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Arabidopsis thaliana GN=At3g12260 PE=2 SV=1	AT3G12260.1	| Symbols: | LYR family of Fe/S cluster biogenesis protein | chr3:3909252-3910337 REVERSE LENGTH=133	LOC_Os07g44650.1	protein|LYR motif containing protein, putative, expressed	NA	NA	GO:0006096|glycolysis GO:0006511|ubiquitin-dependent protein catabolic process GO:0009060|aerobic respiration GO:0009853|photorespiration GO:0046686|response to cadmium ion GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	GO:0003824|catalytic activity	GO:0005739|mitochondrion GO:0005747|mitochondrial respiratory chain complex I GO:0016020|membrane
pt2_00679	A	A2S	Potri.001G030000	Potri.001G030000(AS) Potri.003G194500(DS)	POPTR_0001s06720	sp|O43447|PPIH_HUMAN	Peptidyl-prolyl cis-trans isomerase H OS=Homo sapiens GN=PPIH PE=1 SV=1	AT2G38730.1	| Symbols: | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein | chr2:16192579-16194038 REVERSE LENGTH=199	LOC_Os03g59700.1	protein|peptidyl-prolyl cis-trans isomerase, putative, expressed	IMGA|AC225458_18.1	Peptidyl-prolyl cis-trans isomerase AC225458.11 44405-42269 E EGN_Mt100125 20111014	GO:0006457|protein folding	GO:0003755|peptidyl-prolyl cis-trans isomerase activity	GO:0005737|cytoplasm GO:0005773|vacuole GO:0005829|cytosol GO:0005886|plasma membrane
pt2_00680	C	C1A	Potri.001G030000	Potri.001G030000(CA)	sp|O43447|PPIH_HUMAN	Peptidyl-prolyl cis-trans isomerase H OS=Homo sapiens GN=PPIH PE=1 SV=1	AT2G38730.1	| Symbols: | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein | chr2:16192579-16194038 REVERSE LENGTH=199	LOC_Os03g59700.1	protein|peptidyl-prolyl cis-trans isomerase, putative, expressed	IMGA|AC225458_18.1	Peptidyl-prolyl cis-trans isomerase AC225458.11 44405-42269 E EGN_Mt100125 20111014	GO:0006457|protein folding	GO:0003755|peptidyl-prolyl cis-trans isomerase activity	GO:0005737|cytoplasm GO:0005773|vacuole GO:0005829|cytosol GO:0005886|plasma membrane
pt2_00681	A	A1S	Potri.001G030100	Potri.001G030100(AS)	POPTR_0001s06740	NA	NA	AT5G06970.1	| Symbols: | Protein of unknown function (DUF810) | chr5:2158431-2166004 REVERSE LENGTH=1101	LOC_Os03g47930.1	protein|expressed protein	IMGA|Medtr1g107110.1	hypothetical protein chr1 31598271-31592980 E EGN_Mt100125 20111014	GO:0007155|cell adhesion GO:0008150|biological_process GO:0010090|trichome morphogenesis GO:0045010|actin nucleation	GO:0003674|molecular_function	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_00682	A	A1S	Potri.001G030200	Potri.001G030200(AS)	POPTR_0001s06750	sp|Q0WVD6|ANM3_ARATH	Probable protein arginine N-methyltransferase 3 OS=Arabidopsis thaliana GN=PRMT3 PE=2 SV=1	AT3G12270.1	| Symbols: ATPRMT3, PRMT3 | protein arginine methyltransferase 3 | chr3:3910642-3913122 FORWARD LENGTH=601	LOC_Os07g44640.1	protein|ZOS7-13 - C2H2 zinc finger protein, expressed	IMGA|Medtr1g113940.1	Protein arginine N-methyltransferase chr1 32935252-32929775 H EGN_Mt100125 20111014	GO:0000741|karyogamy GO:0001510|RNA methylation GO:0006479|protein methylation GO:0006606|protein import into nucleus GO:0009220|pyrimidine ribonucleotide biosynthetic process GO:0009560|embryo sac egg cell differentiation GO:0042991|transcription factor import into nucleus	GO:0008168|methyltransferase activity GO:0008270|zinc ion binding GO:0008276|protein methyltransferase activity	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_00683	A	A1S	Potri.001G030300	Potri.001G030300(AS)	POPTR_0001s06760	NA	NA	AT5G07900.1	| Symbols: | Mitochondrial transcription termination factor family protein | chr5:2520188-2521405 FORWARD LENGTH=405	LOC_Os07g24090.1	protein|mTERF domain containing protein, expressed	IMGA|Medtr5g068860.1	mTERF family protein chr5 28178153-28176173 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0016020|membrane
pt2_00684	A	A1S	Potri.001G030400	Potri.001G030400(AS)	POPTR_0001s06770	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0006346|methylation-dependent chromatin silencing GO:0008150|biological_process GO:0009855|determination of bilateral symmetry GO:0009909|regulation of flower development GO:0010014|meristem initiation GO:0010073|meristem maintenance GO:0016246|RNA interference GO:0016570|histone modification GO:0031047|gene silencing by RNA GO:0031048|chromatin silencing by small RNA GO:0048449|floral organ formation GO:0051567|histone H3-K9 methylation	NA	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00685	A	A1S	Potri.001G030500	Potri.001G030500(AS)	POPTR_0001s06780	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0006346|methylation-dependent chromatin silencing GO:0008150|biological_process GO:0009855|determination of bilateral symmetry GO:0009909|regulation of flower development GO:0010014|meristem initiation GO:0010073|meristem maintenance GO:0016246|RNA interference GO:0016570|histone modification GO:0031047|gene silencing by RNA GO:0031048|chromatin silencing by small RNA GO:0048449|floral organ formation GO:0051567|histone H3-K9 methylation	NA	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00686	A	A1S	Potri.001G030600	Potri.001G030600(AS)	POPTR_0001s06790	sp|Q940V3|U91A1_ARATH	UDP-glycosyltransferase 91A1 OS=Arabidopsis thaliana GN=UGT91A1 PE=2 SV=1	AT2G22590.1	| Symbols: | UDP-Glycosyltransferase superfamily protein | chr2:9593012-9594424 FORWARD LENGTH=470	LOC_Os01g64540.1	protein|anthocyanidin 3-O-glucosyltransferase, putative, expressed	IMGA|Medtr5g066410.1	Anthocyanidin 3-O-glucosyltransferase chr5 27021858-27020462 H EGN_Mt100125 20111014	GO:0008152|metabolic process	GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups	GO:0005575|cellular_component
pt2_00687	A	A1S	Potri.001G030700	Potri.001G030700(AS)	POPTR_0001s06810	sp|Q9H9Y6|RPA2_HUMAN	DNA-directed RNA polymerase I subunit RPA2 OS=Homo sapiens GN=POLR1B PE=1 SV=2	AT1G29940.1	| Symbols: NRPA2 | nuclear RNA polymerase A2 | chr1:10479322-10486670 REVERSE LENGTH=1178	LOC_Os10g35290.1	protein|DNA-directed RNA polymerase I subunit RPA2, putative, expressed	IMGA|Medtr1g023500.1	DNA-directed RNA polymerase chr1 7265019-7274285 E EGN_Mt100125 20111014	GO:0006351|transcription, DNA-dependent	GO:0003677|DNA binding GO:0003899|DNA-directed RNA polymerase activity GO:0032549|ribonucleoside binding	GO:0005634|nucleus GO:0005829|cytosol GO:0009507|chloroplast
pt2_00688	C	C1A	Potri.001G030900	Potri.001G030900(CA)	sp|A8K979|ERI2_HUMAN	ERI1 exoribonuclease 2 OS=Homo sapiens GN=ERI2 PE=2 SV=2	AT3G15140.1	| Symbols: | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr3:5099712-5101717 REVERSE LENGTH=337	LOC_Os01g17279.1	protein|exonuclease, putative, expressed	NA	NA	GO:0009220|pyrimidine ribonucleotide biosynthetic process	GO:0004527|exonuclease activity	GO:0005622|intracellular GO:0005739|mitochondrion
pt2_00689	A	A2S	Potri.001G030900	Potri.001G030900(AS) Potri.003G194300(BS)	POPTR_0001s06840	sp|A8K979|ERI2_HUMAN	ERI1 exoribonuclease 2 OS=Homo sapiens GN=ERI2 PE=2 SV=2	AT3G15140.1	| Symbols: | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr3:5099712-5101717 REVERSE LENGTH=337	LOC_Os01g17279.1	protein|exonuclease, putative, expressed	NA	NA	GO:0009220|pyrimidine ribonucleotide biosynthetic process	GO:0004527|exonuclease activity	GO:0005622|intracellular GO:0005739|mitochondrion
pt2_00690	A	A1S	Potri.001G030900	Potri.001G030900(AS)	POPTR_0001s06840	sp|A8K979|ERI2_HUMAN	ERI1 exoribonuclease 2 OS=Homo sapiens GN=ERI2 PE=2 SV=2	AT3G15140.1	| Symbols: | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr3:5099712-5101717 REVERSE LENGTH=337	LOC_Os01g17279.1	protein|exonuclease, putative, expressed	NA	NA	GO:0009220|pyrimidine ribonucleotide biosynthetic process	GO:0004527|exonuclease activity	GO:0005622|intracellular GO:0005739|mitochondrion
pt2_00691	A	A1S	Potri.001G031100	Potri.001G031100(AS)	POPTR_0001s06850	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00692	A	A1S	Potri.001G031400	Potri.001G031400(AS)	POPTR_0001s06870	sp|B9GLX8|RBR_POPTR	Retinoblastoma-related protein OS=Populus trichocarpa GN=RBL901 PE=2 SV=1	AT3G12280.2	| Symbols: RBR1 | retinoblastoma-related 1 | chr3:3913671-3918433 REVERSE LENGTH=1012	LOC_Os08g42600.2	protein|retinoblastoma-related protein-like, putative, expressed	NA	NA	GO:0001558|regulation of cell growth GO:0001708|cell fate specification GO:0006261|DNA-dependent DNA replication GO:0006349|regulation of gene expression by genetic imprinting GO:0009553|embryo sac development GO:0009555|pollen development GO:0009567|double fertilization forming a zygote and endosperm GO:0009960|endosperm development GO:0010090|trichome morphogenesis GO:0022619|generative cell differentiation GO:0032875|regulation of DNA endoreduplication GO:0042023|DNA endoreduplication GO:0048366|leaf development GO:0051302|regulation of cell division GO:0051726|regulation of cell cycle GO:0051783|regulation of nuclear division GO:2000036|regulation of stem cell maintenance	GO:0003677|DNA binding GO:0005515|protein binding GO:0008134|transcription factor binding	GO:0005634|nucleus GO:0005829|cytosol
pt2_00693	A	A1S	Potri.001G031500	Potri.001G031500(AS)	POPTR_0001s06880	sp|Q500W7|PIGM_ARATH	GPI mannosyltransferase 1 OS=Arabidopsis thaliana GN=PIGM PE=2 SV=1	AT5G22130.1	| Symbols: PNT1 | mannosyltransferase family protein | chr5:7337486-7339831 REVERSE LENGTH=450	LOC_Os03g46750.1	protein|GPI mannosyltransferase 1, putative, expressed	NA	NA	GO:0006506|GPI anchor biosynthetic process GO:0009790|embryo development GO:0030244|cellulose biosynthetic process	GO:0000030|mannosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups GO:0051751|alpha-1,4-mannosyltransferase activity	GO:0005739|mitochondrion GO:0005789|endoplasmic reticulum membrane GO:0016021|integral to membrane
pt2_00694	A	A1S	Potri.001G031500	Potri.001G031500(AS)	POPTR_0001s06880	sp|Q500W7|PIGM_ARATH	GPI mannosyltransferase 1 OS=Arabidopsis thaliana GN=PIGM PE=2 SV=1	AT5G22130.1	| Symbols: PNT1 | mannosyltransferase family protein | chr5:7337486-7339831 REVERSE LENGTH=450	LOC_Os03g46750.1	protein|GPI mannosyltransferase 1, putative, expressed	NA	NA	GO:0006506|GPI anchor biosynthetic process GO:0009790|embryo development GO:0030244|cellulose biosynthetic process	GO:0000030|mannosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups GO:0051751|alpha-1,4-mannosyltransferase activity	GO:0005739|mitochondrion GO:0005789|endoplasmic reticulum membrane GO:0016021|integral to membrane
pt2_00695	A	A1S	Potri.001G031500	Potri.001G031500(AS)	POPTR_0001s06880	sp|Q500W7|PIGM_ARATH	GPI mannosyltransferase 1 OS=Arabidopsis thaliana GN=PIGM PE=2 SV=1	AT5G22130.1	| Symbols: PNT1 | mannosyltransferase family protein | chr5:7337486-7339831 REVERSE LENGTH=450	LOC_Os03g46750.1	protein|GPI mannosyltransferase 1, putative, expressed	NA	NA	GO:0006506|GPI anchor biosynthetic process GO:0009790|embryo development GO:0030244|cellulose biosynthetic process	GO:0000030|mannosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups GO:0051751|alpha-1,4-mannosyltransferase activity	GO:0005739|mitochondrion GO:0005789|endoplasmic reticulum membrane GO:0016021|integral to membrane
pt2_00696	A	A1S	Potri.001G031600	Potri.001G031600(AS)	POPTR_0001s06890	sp|Q94BT2|AIR12_ARATH	Auxin-induced in root cultures protein 12 OS=Arabidopsis thaliana GN=AIR12 PE=1 SV=3	AT5G47530.1	| Symbols: | Auxin-responsive family protein | chr5:19281471-19282870 FORWARD LENGTH=395	LOC_Os03g09900.1	protein|membrane protein, putative, expressed	IMGA|Medtr5g097620.1	Auxin-induced in root cultures protein chr5 41730891-41729403 F EGN_Mt100125 20111014	GO:0007275|multicellular organismal development GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process	NA	GO:0005886|plasma membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_00697	A	A1S	Potri.001G031700	Potri.001G031700(AS)	POPTR_0001s06900	sp|Q96FV9|THOC1_HUMAN	THO complex subunit 1 OS=Homo sapiens GN=THOC1 PE=1 SV=1	AT5G09860.1	| Symbols: AtTHO1, THO1, AtHPR1, HPR1 | nuclear matrix protein-related | chr5:3066815-3070733 FORWARD LENGTH=599	LOC_Os03g01970.1	protein|THO complex subunit 1, putative, expressed	NA	NA	GO:0006406|mRNA export from nucleus GO:0010267|production of ta-siRNAs involved in RNA interference GO:0031047|gene silencing by RNA GO:0050832|defense response to fungus	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00698	A	A1S	Potri.001G031800	Potri.001G031800(AS)	POPTR_0001s06910	NA	NA	AT3G12320.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06980.4); Has 102 Blast hits to 102 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). | chr3:3924034-3925262 FORWARD LENGTH=269	NA	NA	NA	NA	GO:0009651|response to salt stress GO:0009737|response to abscisic acid stimulus GO:0010264|myo-inositol hexakisphosphate biosynthetic process GO:0080167|response to karrikin	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00699	G	G1	NA	NA	POPTR_0001s06920	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00700	A	A1S	Potri.001G032000	Potri.001G032000(AS)	POPTR_0001s06930	sp|A7MCT6|EKI2_MOUSE	Ethanolamine kinase 2 OS=Mus musculus GN=Etnk2 PE=1 SV=1	AT1G74320.1	| Symbols: | Protein kinase superfamily protein | chr1:27941192-27942903 FORWARD LENGTH=350	LOC_Os05g45880.1	protein|phosphotransferase, putative, expressed	IMGA|Medtr1g098090.1	Choline/ethanolamine kinase chr1 28077996-28074520 F EGN_Mt100125 20111014	NA	GO:0004103|choline kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0016773|phosphotransferase activity, alcohol group as acceptor	GO:0005737|cytoplasm
pt2_00701	A	A1S	Potri.001G032100	Potri.001G032100(AS)	POPTR_0001s06940	sp|Q6J163|5NG4_PINTA	Auxin-induced protein 5NG4 OS=Pinus taeda PE=2 SV=1	AT3G28050.1	| Symbols: | nodulin MtN21 /EamA-like transporter family protein | chr3:10442984-10445216 FORWARD LENGTH=367	LOC_Os08g44750.1	protein|auxin-induced protein 5NG4, putative, expressed	IMGA|Medtr5g034990.1	Auxin-induced protein 5NG4 chr5 14785696-14797083 F EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0016020|membrane
pt2_00702	A	A1S	Potri.001G032200	Potri.001G032200(AS)	POPTR_0001s06950	NA	NA	AT5G07020.1	| Symbols: | proline-rich family protein | chr5:2180669-2182284 REVERSE LENGTH=235	LOC_Os02g35090.1	protein|expressed protein	NA	NA	GO:0008150|biological_process GO:0009902|chloroplast relocation GO:0009965|leaf morphogenesis GO:0010027|thylakoid membrane organization GO:0016117|carotenoid biosynthetic process GO:0030154|cell differentiation GO:0034660|ncRNA metabolic process GO:0042793|transcription from plastid promoter	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009579|thylakoid
pt2_00703	A	A2S	Potri.001G032300	Potri.001G032300(AS) Potri.003G192700(DS)	POPTR_0001s06960	sp|Q9FL42|ATL69_ARATH	Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana GN=ATL69 PE=3 SV=1	AT5G07040.1	| Symbols: | RING/U-box superfamily protein | chr5:2190344-2190823 FORWARD LENGTH=159	LOC_Os12g04130.1	protein|OsFBO23 - F-box and other domain containing protein, expressed	IMGA|Medtr5g009190.1	RING-H2 zinc finger protein chr5 1905375-1903724 E EGN_Mt100125 20111014	NA	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_00704	A	A1S	Potri.001G032400	Potri.001G032400(AS)	POPTR_0001s06970	sp|Q9SX25|CXE6_ARATH	Probable carboxylesterase 6 OS=Arabidopsis thaliana GN=CXE6 PE=2 SV=1	AT1G68620.1	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr1:25766018-25767028 FORWARD LENGTH=336	LOC_Os05g33940.1	protein|alpha/beta hydrolase fold, putative, expressed	IMGA|Medtr5g005920.1	Neutral cholesterol ester hydrolase chr5 435639-436637 H EGN_Mt100125 20111014	GO:0008152|metabolic process	GO:0016787|hydrolase activity	GO:0005575|cellular_component
pt2_00705	A	A1S	Potri.001G032500	Potri.001G032500(AS)	POPTR_0001s06980	sp|Q6J163|5NG4_PINTA	Auxin-induced protein 5NG4 OS=Pinus taeda PE=2 SV=1	AT5G07050.1	| Symbols: | nodulin MtN21 /EamA-like transporter family protein | chr5:2191533-2193416 REVERSE LENGTH=402	LOC_Os05g33900.1	protein|auxin-induced protein 5NG4, putative, expressed	IMGA|Medtr5g021160.1	Auxin-induced protein 5NG4 chr5 7866846-7869645 E EGN_Mt100125 20111014	NA	NA	GO:0009507|chloroplast GO:0016020|membrane
pt2_00706	C	C1S	Potri.001G032600	Potri.001G032600(CS)	sp|Q9ZVJ3|MA655_ARATH	65-kDa microtubule-associated protein 5 OS=Arabidopsis thaliana GN=MAP65-5 PE=1 SV=2	AT2G38720.1	| Symbols: MAP65-5 | microtubule-associated protein 65-5 | chr2:16188047-16192102 FORWARD LENGTH=587	LOC_Os05g33890.1	protein|microtubule associated protein, putative, expressed	IMGA|Medtr5g093860.1	Microtubule-associated protein MAP65-1a chr5 39942422-39947104 E EGN_Mt100125 20111014	GO:0000226|microtubule cytoskeleton organization GO:0000280|nuclear division GO:0006275|regulation of DNA replication GO:0007000|nucleolus organization GO:0007067|mitosis GO:0007129|synapsis GO:0007131|reciprocal meiotic recombination GO:0008283|cell proliferation GO:0009909|regulation of flower development GO:0010389|regulation of G2/M transition of mitotic cell cycle GO:0010564|regulation of cell cycle process GO:0016458|gene silencing GO:0016572|histone phosphorylation GO:0034968|histone lysine methylation GO:0042023|DNA endoreduplication GO:0045010|actin nucleation GO:0048528|post-embryonic root development GO:0051225|spindle assembly GO:0051258|protein polymerization GO:0051302|regulation of cell division	GO:0003674|molecular_function	GO:0009524|phragmoplast GO:0009574|preprophase band GO:0055028|cortical microtubule
pt2_00707	A	A1S	Potri.001G032700	Potri.001G032700(AS)	POPTR_0001s07000	NA	NA	NA	NA	NA	NA	NA	NA	GO:0000272|polysaccharide catabolic process GO:0001578|microtubule bundle formation GO:0005982|starch metabolic process GO:0007020|microtubule nucleation GO:0008283|cell proliferation GO:0009664|plant-type cell wall organization GO:0019344|cysteine biosynthetic process GO:0030244|cellulose biosynthetic process GO:0031116|positive regulation of microtubule polymerization GO:0043622|cortical microtubule organization GO:0046785|microtubule polymerization GO:0048193|Golgi vesicle transport GO:0048528|post-embryonic root development GO:0051302|regulation of cell division	GO:0005515|protein binding GO:0008017|microtubule binding GO:0046983|protein dimerization activity	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005819|spindle GO:0005829|cytosol GO:0005874|microtubule GO:0009524|phragmoplast GO:0009574|preprophase band GO:0010005|cortical microtubule, transverse to long axis GO:0055028|cortical microtubule
pt2_00708	B	B1S	Potri.001G032800	Potri.001G032800(BS)	POPTR_0001s07010	sp|Q9T0K2|C71AK_ARATH	Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2	AT1G75130.1	| Symbols: CYP721A1 | cytochrome P450, family 721, subfamily A, polypeptide 1 | chr1:28200073-28201911 REVERSE LENGTH=505	LOC_Os07g45000.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g045250.1	Cytochrome P450 78A11 chr5 19442194-19440472 E EGN_Mt100125 20111014	GO:0009416|response to light stimulus GO:0009733|response to auxin stimulus GO:0009741|response to brassinosteroid stimulus GO:0010268|brassinosteroid homeostasis GO:0016131|brassinosteroid metabolic process GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0008395|steroid hydroxylase activity GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	NA
pt2_00709	B	B1S	Potri.001G032900	Potri.001G032900(BS)	POPTR_0001s07020	sp|Q0JNR2|CYT12_ORYSJ	Cysteine proteinase inhibitor 12 OS=Oryza sativa subsp. japonica GN=Os01g0270100 PE=2 SV=1	AT3G12490.1	| Symbols: ATCYSB, ATCYS6, CYSB | cystatin B | chr3:3960523-3961777 REVERSE LENGTH=201	LOC_Os01g16430.1	protein|cysteine proteinase inhibitor precursor protein, putative, expressed	IMGA|Medtr5g088770.1	Cysteine proteinase inhibitor chr5 37515043-37513809 F EGN_Mt100125 20111014	GO:0009628|response to abiotic stimulus	GO:0004869|cysteine-type endopeptidase inhibitor activity GO:0050897|cobalt ion binding	GO:0005576|extracellular region GO:0005783|endoplasmic reticulum GO:0005829|cytosol
pt2_00710	G	G1	NA	NA	POPTR_0001s07030	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00711	A	A1S	Potri.001G033100	Potri.001G033100(AS)	POPTR_0001s07040	sp|Q9LRR4|R13L1_ARATH	Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana GN=RPPL1 PE=2 SV=1	AT3G14470.1	| Symbols: | NB-ARC domain-containing disease resistance protein | chr3:4857940-4861104 FORWARD LENGTH=1054	LOC_Os05g41290.1	protein|disease resistance RPP13-like protein 1, putative, expressed	IMGA|Medtr5g095910.1	NB-LRR type disease resistance protein Rps1-k-2 chr5 40893619-40897389 H EGN_Mt100125 20111014	GO:0006952|defense response GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process	GO:0005515|protein binding GO:0043531|ADP binding	GO:0005576|extracellular region
pt2_00712	A	A1S	Potri.001G033200	Potri.001G033200(AS)	POPTR_0001s07050	sp|A0JPP1|NC2A_RAT	Dr1-associated corepressor OS=Rattus norvegicus GN=Drap1 PE=2 SV=1	AT3G12480.1	| Symbols: NF-YC11 | nuclear factor Y, subunit C11 | chr3:3958065-3960278 FORWARD LENGTH=293	LOC_Os05g41450.1	protein|histone-like transcription factor and archaeal histone, putative, expressed	IMGA|Medtr5g088760.1	Dr1-associated corepressor chr5 37502840-37503591 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005622|intracellular GO:0005634|nucleus GO:0005829|cytosol
pt2_00713	A	A1S	Potri.001G033400	Potri.001G033400(AS)	POPTR_0001s07060	sp|F4I171|MD15A_ARATH	Mediator of RNA polymerase II transcription subunit 15a OS=Arabidopsis thaliana GN=MED15A PE=1 SV=1	AT1G15780.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI BLink). | chr1:5430446-5435921 REVERSE LENGTH=1335	LOC_Os08g45080.1	protein|expressed protein	NA	NA	GO:0001676|long-chain fatty acid metabolic process GO:0002213|defense response to insect GO:0006633|fatty acid biosynthetic process GO:0009751|response to salicylic acid stimulus	NA	GO:0005634|nucleus
pt2_00714	A	A1S	Potri.001G033500	Potri.001G033500(AS)	POPTR_0001s07070	sp|O68283|ALKD_PSEAE	2-dehydro-3-deoxy-phosphogluconate aldolase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=eda PE=3 SV=2	NA	NA	LOC_Os07g12160.1	protein|KHG/KDPG aldolase, putative, expressed	NA	NA	NA	NA	NA
pt2_00715	A	A1S	Potri.001G033600	Potri.001G033600(AS)	POPTR_0001s07080	NA	NA	AT2G26920.1	| Symbols: | Ubiquitin-associated/translation elongation factor EF1B protein | chr2:11489648-11491588 FORWARD LENGTH=646	LOC_Os05g33850.1	protein|UBA/TS-N domain containing protein, expressed	IMGA|Medtr5g088750.1	hypothetical protein chr5 37495868-37490284 E EGN_Mt100125 20111014	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00716	A	A1S	Potri.001G033700	Potri.001G033700(AS)	POPTR_0001s07090	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00717	A	A1S	Potri.001G033800	Potri.001G033800(AS)	POPTR_0001s07100	sp|Q9SWH5|FUT1_ARATH	Galactoside 2-alpha-L-fucosyltransferase OS=Arabidopsis thaliana GN=FUT1 PE=2 SV=2	AT2G03220.1	| Symbols: FT1, ATFUT1, ATFT1, MUR2 | fucosyltransferase 1 | chr2:970401-972353 REVERSE LENGTH=558	LOC_Os02g52630.1	protein|xyloglucan fucosyltransferase, putative, expressed	IMGA|Medtr1g090430.1	Alpha-1 2-fucosyltransferase chr1 24966674-24964926 H EGN_Mt100125 20111014	GO:0009744|response to sucrose stimulus GO:0009749|response to glucose stimulus GO:0009750|response to fructose stimulus GO:0009969|xyloglucan biosynthetic process GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process	GO:0008107|galactoside 2-alpha-L-fucosyltransferase activity GO:0008417|fucosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups	GO:0005794|Golgi apparatus GO:0016020|membrane
pt2_00718	A	A1S	Potri.001G033900	Potri.001G033900(AS)	POPTR_0001s07110	sp|Q9CR08|RPP29_MOUSE	Ribonuclease P protein subunit p29 OS=Mus musculus GN=Pop4 PE=2 SV=1	AT2G43190.2	| Symbols: | ribonuclease P family protein | chr2:17956220-17957833 FORWARD LENGTH=295	LOC_Os05g39530.1	protein|ribonuclease P family protein, putative, expressed	IMGA|Medtr5g007880.1	Ribonuclease P protein subunit p29 chr5 1340372-1336134 E EGN_Mt100125 20111014	GO:0006364|rRNA processing GO:0006396|RNA processing GO:0009410|response to xenobiotic stimulus GO:0048522|positive regulation of cellular process	GO:0003723|RNA binding GO:0004526|ribonuclease P activity GO:0004540|ribonuclease activity	GO:0000172|ribonuclease MRP complex GO:0005634|nucleus GO:0005655|nucleolar ribonuclease P complex GO:0030677|ribonuclease P complex
pt2_00719	B	B1S	Potri.001G034000	Potri.001G034000(BS)	POPTR_0001s07120	sp|Q9SWH5|FUT1_ARATH	Galactoside 2-alpha-L-fucosyltransferase OS=Arabidopsis thaliana GN=FUT1 PE=2 SV=2	AT2G03220.1	| Symbols: FT1, ATFUT1, ATFT1, MUR2 | fucosyltransferase 1 | chr2:970401-972353 REVERSE LENGTH=558	LOC_Os02g52640.1	protein|xyloglucan fucosyltransferase, putative, expressed	IMGA|Medtr1g090430.1	Alpha-1 2-fucosyltransferase chr1 24966674-24964926 H EGN_Mt100125 20111014	NA	GO:0008107|galactoside 2-alpha-L-fucosyltransferase activity GO:0008417|fucosyltransferase activity	GO:0005794|Golgi apparatus GO:0016020|membrane
pt2_00720	A	A2S	Potri.001G034100	Potri.001G034100(AS) Potri.003G191200(DS)	POPTR_0001s07130	sp|Q9M5Q1|FUT1_PEA	Galactoside 2-alpha-L-fucosyltransferase OS=Pisum sativum GN=FT1 PE=2 SV=1	AT2G03220.1	| Symbols: FT1, ATFUT1, ATFT1, MUR2 | fucosyltransferase 1 | chr2:970401-972353 REVERSE LENGTH=558	LOC_Os02g52630.1	protein|xyloglucan fucosyltransferase, putative, expressed	IMGA|Medtr1g090430.1	Alpha-1 2-fucosyltransferase chr1 24966674-24964926 H EGN_Mt100125 20111014	GO:0009744|response to sucrose stimulus GO:0009749|response to glucose stimulus GO:0009750|response to fructose stimulus GO:0009969|xyloglucan biosynthetic process GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process	GO:0008107|galactoside 2-alpha-L-fucosyltransferase activity GO:0008417|fucosyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups	GO:0005794|Golgi apparatus GO:0016020|membrane
pt2_00721	A	A1S	Potri.001G034200	Potri.001G034200(AS)	POPTR_0001s07140	sp|Q9FFY6|ELCL_ARATH	Protein ELC-like OS=Arabidopsis thaliana GN=ELCL PE=1 SV=1	AT5G13860.1	| Symbols: ELC-Like | ELCH-like | chr5:4473212-4474318 REVERSE LENGTH=368	LOC_Os02g58640.1	protein|tumor susceptibility gene 101, putative, expressed	IMGA|Medtr5g075880.1	Protein ELC chr5 31283129-31282572 H EGN_Mt100125 20111014	GO:0006464|cellular protein modification process GO:0010091|trichome branching GO:0010200|response to chitin GO:0015031|protein transport	GO:0005515|protein binding GO:0016881|acid-amino acid ligase activity GO:0043130|ubiquitin binding	GO:0000813|ESCRT I complex GO:0005634|nucleus GO:0005769|early endosome GO:0005770|late endosome GO:0043234|protein complex
pt2_00722	A	A1S	Potri.001G034300	Potri.001G034300(AS)	POPTR_0001s07150	sp|Q8UVK2|SPT6H_DANRE	Transcription elongation factor SPT6 OS=Danio rerio GN=supt6h PE=1 SV=1	AT1G65440.3	| Symbols: GTB1 | global transcription factor group B1 | chr1:24306988-24314302 REVERSE LENGTH=1454	NA	NA	NA	NA	GO:0006139|nucleobase-containing compound metabolic process GO:0006333|chromatin assembly or disassembly GO:0006352|DNA-dependent transcription, initiation GO:0006357|regulation of transcription from RNA polymerase II promoter GO:0009630|gravitropism GO:0032784|regulation of DNA-dependent transcription, elongation	GO:0003723|RNA binding GO:0016788|hydrolase activity, acting on ester bonds	GO:0005634|nucleus GO:0005829|cytosol GO:0009506|plasmodesma
pt2_00723	A	A2S	Potri.001G034400	Potri.001G034400(AS) Potri.003G190800(DS)	POPTR_0001s07160	sp|Q9M612|NACA_PINTA	Nascent polypeptide-associated complex subunit alpha-like protein OS=Pinus taeda PE=2 SV=1	AT3G12390.1	| Symbols: | Nascent polypeptide-associated complex (NAC), alpha subunit family protein | chr3:3942344-3943595 FORWARD LENGTH=203	LOC_Os01g71230.2	protein|nascent polypeptide-associated complex subunit alpha-like protein 3, putative, expressed	NA	NA	GO:0006606|protein import into nucleus GO:0009651|response to salt stress	NA	GO:0005634|nucleus GO:0005829|cytosol GO:0009506|plasmodesma GO:0022626|cytosolic ribosome
pt2_00724	A	A1S	Potri.001G034500	Potri.001G034500(AS)	POPTR_0001s07170	NA	NA	AT5G07900.1	| Symbols: | Mitochondrial transcription termination factor family protein | chr5:2520188-2521405 FORWARD LENGTH=405	LOC_Os07g24090.1	protein|mTERF domain containing protein, expressed	IMGA|Medtr5g068860.1	mTERF family protein chr5 28178153-28176173 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0016020|membrane
pt2_00725	A	A1S	Potri.001G034600	Potri.001G034600(AS)	POPTR_0001s07180	NA	NA	AT5G07900.1	| Symbols: | Mitochondrial transcription termination factor family protein | chr5:2520188-2521405 FORWARD LENGTH=405	LOC_Os07g24090.1	protein|mTERF domain containing protein, expressed	IMGA|Medtr5g068860.1	mTERF family protein chr5 28178153-28176173 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0016020|membrane
pt2_00726	A	A2S	Potri.001G034800	Potri.001G034800(AS) Potri.001G034700(AA)	POPTR_0001s07190	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00727	A	A1S	Potri.001G034700	Potri.001G034700(AS)	POPTR_0001s07200	NA	NA	AT5G07900.1	| Symbols: | Mitochondrial transcription termination factor family protein | chr5:2520188-2521405 FORWARD LENGTH=405	LOC_Os07g24090.1	protein|mTERF domain containing protein, expressed	IMGA|Medtr5g068860.1	mTERF family protein chr5 28178153-28176173 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0016020|membrane
pt2_00728	A	A1S	Potri.001G034900	Potri.001G034900(AS)	POPTR_0001s07210	NA	NA	AT5G07900.1	| Symbols: | Mitochondrial transcription termination factor family protein | chr5:2520188-2521405 FORWARD LENGTH=405	LOC_Os07g24090.1	protein|mTERF domain containing protein, expressed	IMGA|Medtr5g068860.1	mTERF family protein chr5 28178153-28176173 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0016020|membrane
pt2_00729	R	R	NA	NA	POPTR_0001s07220	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00730	R	R	NA	NA	POPTR_0001s07230	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00731	A	A1S	Potri.001G035000	Potri.001G035000(AS)	POPTR_0001s07240	NA	NA	AT5G07900.1	| Symbols: | Mitochondrial transcription termination factor family protein | chr5:2520188-2521405 FORWARD LENGTH=405	LOC_Os02g51450.1	protein|mTERF family protein, expressed	IMGA|Medtr5g094610.1	mTERF domain-containing protein chr5 40306157-40309320 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0016020|membrane
pt2_00732	A	A1S	Potri.001G035200	Potri.001G035200(AS)	POPTR_0001s07250	NA	NA	AT5G07900.1	| Symbols: | Mitochondrial transcription termination factor family protein | chr5:2520188-2521405 FORWARD LENGTH=405	LOC_Os07g24090.1	protein|mTERF domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0016020|membrane
pt2_00733	D	D1S	Potri.001G035300	Potri.001G035300(DS)	POPTR_0001s07260	NA	NA	AT5G07900.1	| Symbols: | Mitochondrial transcription termination factor family protein | chr5:2520188-2521405 FORWARD LENGTH=405	LOC_Os07g24090.1	protein|mTERF domain containing protein, expressed	IMGA|Medtr5g068860.1	mTERF family protein chr5 28178153-28176173 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0016020|membrane
pt2_00734	A	A1S	Potri.001G035400	Potri.001G035400(AS)	POPTR_0001s07270	sp|Q6Z8C8|CDKF4_ORYSJ	Cyclin-dependent kinase F-4 OS=Oryza sativa subsp. japonica GN=CDKF-4 PE=2 SV=1	AT4G19110.3	| Symbols: | Protein kinase superfamily protein | chr4:10454770-10457032 REVERSE LENGTH=404	LOC_Os06g02550.2	protein|CPuORF21 - conserved peptide uORF-containing transcript, expressed	IMGA|Medtr5g026960.1	Serine/threonine protein kinase ICK chr5 10917762-10923315 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0045727|positive regulation of translation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_00735	B	B1S	Potri.001G035500	Potri.001G035500(BS)	POPTR_0001s07280	sp|Q9SU30|CPR30_ARATH	F-box protein CPR30 OS=Arabidopsis thaliana GN=CPR30 PE=1 SV=2	AT4G12560.2	| Symbols: CPR30 | F-box and associated interaction domains-containing protein | chr4:7441815-7443157 FORWARD LENGTH=413	LOC_Os09g20650.1	protein|OsFBX323 - F-box domain containing protein, expressed	IMGA|Medtr5g011200.1	F-box/kelch-repeat protein chr5 2937583-2939621 E EGN_Mt100125 20111014	GO:0031348|negative regulation of defense response GO:0042177|negative regulation of protein catabolic process	GO:0003674|molecular_function GO:0005515|protein binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_00736	A	A1S	Potri.001G035500	Potri.001G035500(AS)	POPTR_0001s07280	sp|Q9SU30|CPR30_ARATH	F-box protein CPR30 OS=Arabidopsis thaliana GN=CPR30 PE=1 SV=2	AT4G12560.2	| Symbols: CPR30 | F-box and associated interaction domains-containing protein | chr4:7441815-7443157 FORWARD LENGTH=413	LOC_Os09g20650.1	protein|OsFBX323 - F-box domain containing protein, expressed	IMGA|Medtr5g011200.1	F-box/kelch-repeat protein chr5 2937583-2939621 E EGN_Mt100125 20111014	GO:0031348|negative regulation of defense response GO:0042177|negative regulation of protein catabolic process	GO:0003674|molecular_function GO:0005515|protein binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_00737	A	A1S	Potri.001G035500	Potri.001G035500(AS)	POPTR_0001s07280	sp|Q9SU30|CPR30_ARATH	F-box protein CPR30 OS=Arabidopsis thaliana GN=CPR30 PE=1 SV=2	AT4G12560.2	| Symbols: CPR30 | F-box and associated interaction domains-containing protein | chr4:7441815-7443157 FORWARD LENGTH=413	LOC_Os09g20650.1	protein|OsFBX323 - F-box domain containing protein, expressed	IMGA|Medtr5g011200.1	F-box/kelch-repeat protein chr5 2937583-2939621 E EGN_Mt100125 20111014	GO:0031348|negative regulation of defense response GO:0042177|negative regulation of protein catabolic process	GO:0003674|molecular_function GO:0005515|protein binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_00738	A	A1S	Potri.001G035600	Potri.001G035600(AS)	POPTR_0001s07290	NA	NA	AT5G07900.1	| Symbols: | Mitochondrial transcription termination factor family protein | chr5:2520188-2521405 FORWARD LENGTH=405	LOC_Os07g24090.1	protein|mTERF domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0016020|membrane
pt2_00739	A	A1S	Potri.001G035700	Potri.001G035700(AS)	POPTR_0001s07300	sp|O60318|MCM3A_HUMAN	80 kDa MCM3-associated protein OS=Homo sapiens GN=MCM3AP PE=1 SV=2	AT3G54380.1	| Symbols: | SAC3/GANP/Nin1/mts3/eIF-3 p25 family | chr3:20133985-20136752 REVERSE LENGTH=406	LOC_Os03g22870.1	protein|SAC3/GANP family protein, putative, expressed	NA	NA	GO:0008150|biological_process GO:0048573|photoperiodism, flowering	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005739|mitochondrion
pt2_00740	A	A1S	Potri.001G035800	Potri.001G035800(AS)	POPTR_0001s07310	sp|Q7TQ20|DNJC2_RAT	DnaJ homolog subfamily C member 2 OS=Rattus norvegicus GN=Dnajc2 PE=2 SV=1	AT3G11450.1	| Symbols: | DnaJ domain ;Myb-like DNA-binding domain | chr3:3605459-3607402 REVERSE LENGTH=647	LOC_Os04g30890.1	protein|MYB family transcription factor, putative, expressed	NA	NA	GO:0006457|protein folding	GO:0003677|DNA binding GO:0031072|heat shock protein binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00741	A	A1S	Potri.001G035900	Potri.001G035900(AS)	POPTR_0001s07320	sp|Q9FFW5|PERK8_ARATH	Proline-rich receptor-like protein kinase PERK8 OS=Arabidopsis thaliana GN=PERK8 PE=1 SV=1	AT5G56790.1	| Symbols: | Protein kinase superfamily protein | chr5:22968610-22971391 FORWARD LENGTH=669	LOC_Os01g41870.2	protein|protein kinase, putative, expressed	IMGA|Medtr5g034210.1	Receptor-like-kinase chr5 14377604-14370310 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0046777|protein autophosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005575|cellular_component GO:0005886|plasma membrane
pt2_00742	A	A1S	Potri.001G036000	Potri.001G036000(AS)	POPTR_0001s07330	sp|Q0JIC2|GAM1_ORYSJ	Transcription factor GAMYB OS=Oryza sativa subsp. japonica GN=GAM1 PE=2 SV=1	AT5G06100.3	| Symbols: MYB33, ATMYB33 | myb domain protein 33 | chr5:1838555-1840386 FORWARD LENGTH=520	LOC_Os01g59660.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr1g021230.1	MYB family transcription factor-like protein chr1 6441630-6444638 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009686|gibberellin biosynthetic process GO:0009723|response to ethylene stimulus GO:0009740|gibberellic acid mediated signaling pathway GO:0009751|response to salicylic acid stimulus GO:0009789|positive regulation of abscisic acid mediated signaling pathway GO:0043068|positive regulation of programmed cell death GO:0045893|positive regulation of transcription, DNA-dependent GO:0045926|negative regulation of growth GO:0048235|pollen sperm cell differentiation	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00743	A	A1S	Potri.001G036000	Potri.001G036000(AS)	POPTR_0001s07330	sp|Q0JIC2|GAM1_ORYSJ	Transcription factor GAMYB OS=Oryza sativa subsp. japonica GN=GAM1 PE=2 SV=1	AT5G06100.3	| Symbols: MYB33, ATMYB33 | myb domain protein 33 | chr5:1838555-1840386 FORWARD LENGTH=520	LOC_Os01g59660.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr1g021230.1	MYB family transcription factor-like protein chr1 6441630-6444638 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009686|gibberellin biosynthetic process GO:0009723|response to ethylene stimulus GO:0009740|gibberellic acid mediated signaling pathway GO:0009751|response to salicylic acid stimulus GO:0009789|positive regulation of abscisic acid mediated signaling pathway GO:0043068|positive regulation of programmed cell death GO:0045893|positive regulation of transcription, DNA-dependent GO:0045926|negative regulation of growth GO:0048235|pollen sperm cell differentiation	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00744	A	A1S	Potri.001G036000	Potri.001G036000(AS)	POPTR_0001s07330	sp|Q0JIC2|GAM1_ORYSJ	Transcription factor GAMYB OS=Oryza sativa subsp. japonica GN=GAM1 PE=2 SV=1	AT5G06100.3	| Symbols: MYB33, ATMYB33 | myb domain protein 33 | chr5:1838555-1840386 FORWARD LENGTH=520	LOC_Os01g59660.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr1g021230.1	MYB family transcription factor-like protein chr1 6441630-6444638 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009686|gibberellin biosynthetic process GO:0009723|response to ethylene stimulus GO:0009740|gibberellic acid mediated signaling pathway GO:0009751|response to salicylic acid stimulus GO:0009789|positive regulation of abscisic acid mediated signaling pathway GO:0043068|positive regulation of programmed cell death GO:0045893|positive regulation of transcription, DNA-dependent GO:0045926|negative regulation of growth GO:0048235|pollen sperm cell differentiation	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00745	A	A2S	Potri.001G036100	Potri.001G036100(AS) Potri.003G189500(DS)	POPTR_0001s07340	sp|Q5ZLT0|XPO7_CHICK	Exportin-7 OS=Gallus gallus GN=XPO7 PE=2 SV=1	AT5G06120.2	| Symbols: | ARM repeat superfamily protein | chr5:1845309-1852601 FORWARD LENGTH=1052	LOC_Os03g42050.1	protein|exportin-7-A, putative, expressed	IMGA|contig_8300_1.1	RAN binding protein 16-like protein contig_8300 1546-815 H PREDN 20111014	GO:0000059|protein import into nucleus, docking GO:0006486|protein glycosylation GO:0006886|intracellular protein transport GO:0009630|gravitropism	GO:0008565|protein transporter activity	GO:0005634|nucleus GO:0005643|nuclear pore GO:0005737|cytoplasm GO:0005739|mitochondrion
pt2_00746	A	A1S	Potri.001G036400	Potri.001G036400(AS)	POPTR_0001s07350	NA	NA	AT3G54360.1	| Symbols: | zinc ion binding | chr3:20128570-20131581 REVERSE LENGTH=405	LOC_Os01g01420.3	protein|expressed protein	IMGA|contig_55279_1.1	Polycomb complex protein BMI-1-B contig_55279 979-4644 E PREDN 20111014	NA	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_00747	A	A1S	Potri.001G036500	Potri.001G036500(AS)	POPTR_0001s07360	sp|Q8L5A7|SOT15_ARATH	Cytosolic sulfotransferase 15 OS=Arabidopsis thaliana GN=SOT15 PE=1 SV=1	AT5G07010.1	| Symbols: ATST2A, ST2A | sulfotransferase 2A | chr5:2174960-2176039 REVERSE LENGTH=359	LOC_Os02g45890.1	protein|sulfotransferase domain containing protein, expressed	IMGA|contig_18076_1.1	Sulfotransferase 5b contig_18076 117-1129 H PREDN 20111014	GO:0009611|response to wounding GO:0009694|jasmonic acid metabolic process GO:0009695|jasmonic acid biosynthetic process GO:0009753|response to jasmonic acid stimulus GO:0009867|jasmonic acid mediated signaling pathway	GO:0008146|sulfotransferase activity GO:0080131|hydroxyjasmonate sulfotransferase activity	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_00748	A	A1S	Potri.001G036600	Potri.001G036600(AS)	POPTR_0001s07370	sp|Q8L5A7|SOT15_ARATH	Cytosolic sulfotransferase 15 OS=Arabidopsis thaliana GN=SOT15 PE=1 SV=1	AT5G07010.1	| Symbols: ATST2A, ST2A | sulfotransferase 2A | chr5:2174960-2176039 REVERSE LENGTH=359	LOC_Os02g45890.1	protein|sulfotransferase domain containing protein, expressed	IMGA|contig_18076_1.1	Sulfotransferase 5b contig_18076 117-1129 H PREDN 20111014	GO:0009611|response to wounding GO:0009694|jasmonic acid metabolic process GO:0009695|jasmonic acid biosynthetic process GO:0009753|response to jasmonic acid stimulus GO:0009867|jasmonic acid mediated signaling pathway	GO:0008146|sulfotransferase activity GO:0080131|hydroxyjasmonate sulfotransferase activity	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_00749	A	A1S	Potri.001G036700	Potri.001G036700(AS)	POPTR_0001s07380	sp|Q8L5A7|SOT15_ARATH	Cytosolic sulfotransferase 15 OS=Arabidopsis thaliana GN=SOT15 PE=1 SV=1	AT5G07010.1	| Symbols: ATST2A, ST2A | sulfotransferase 2A | chr5:2174960-2176039 REVERSE LENGTH=359	LOC_Os06g42120.1	protein|sulfotransferase domain containing protein, expressed	IMGA|contig_18076_1.1	Sulfotransferase 5b contig_18076 117-1129 H PREDN 20111014	GO:0009611|response to wounding GO:0009694|jasmonic acid metabolic process GO:0009695|jasmonic acid biosynthetic process GO:0009753|response to jasmonic acid stimulus GO:0009867|jasmonic acid mediated signaling pathway	GO:0008146|sulfotransferase activity GO:0080131|hydroxyjasmonate sulfotransferase activity	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_00750	A	A2S	Potri.001G036800	Potri.001G036800(AS) Potri.003G188700(DS)	POPTR_0001s07390	sp|Q9C5P4|SUVH3_ARATH	Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3 OS=Arabidopsis thaliana GN=SUVH3 PE=2 SV=2	AT1G73100.1	| Symbols: SUVH3, SDG19 | SU(VAR)3-9 homolog 3 | chr1:27491970-27493979 FORWARD LENGTH=669	LOC_Os11g38900.1	protein|histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed	IMGA|Medtr5g013420.1	"Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6" chr5 4000445-4004388 E EGN_Mt100125 20111014	GO:0034968|histone lysine methylation GO:0040029|regulation of gene expression, epigenetic	GO:0008270|zinc ion binding GO:0018024|histone-lysine N-methyltransferase activity GO:0042054|histone methyltransferase activity GO:0042393|histone binding	GO:0005634|nucleus GO:0005694|chromosome
pt2_00751	A	A1S	Potri.001G036900	Potri.001G036900(AS)	POPTR_0001s07400	sp|O24145|4CL1_TOBAC	4-coumarate--CoA ligase 1 OS=Nicotiana tabacum GN=4CL1 PE=2 SV=1	AT3G21240.1	| Symbols: 4CL2, AT4CL2 | 4-coumarate:CoA ligase 2 | chr3:7454497-7457314 REVERSE LENGTH=556	LOC_Os02g08100.1	protein|AMP-binding domain containing protein, expressed	IMGA|Medtr5g007640.1	4-coumarate CoA ligase chr5 1207155-1213155 E EGN_Mt100125 20111014	GO:0008152|metabolic process GO:0009411|response to UV GO:0009611|response to wounding GO:0009620|response to fungus GO:0009698|phenylpropanoid metabolic process GO:0009805|coumarin biosynthetic process GO:0009963|positive regulation of flavonoid biosynthetic process	GO:0003824|catalytic activity GO:0016207|4-coumarate-CoA ligase activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00752	A	A1S	Potri.001G037000	Potri.001G037000(AS)	POPTR_0001s07410	sp|Q9LDX1|SGS3_ARATH	Protein SUPPRESSOR OF GENE SILENCING 3 OS=Arabidopsis thaliana GN=SGS3 PE=1 SV=1	AT5G23570.1	| Symbols: SGS3, ATSGS3 | XS domain-containing protein / XS zinc finger domain-containing protein-related | chr5:7943621-7945874 FORWARD LENGTH=625	LOC_Os12g09580.1	protein|leafbladeless1, putative, expressed	NA	NA	GO:0009616|virus induced gene silencing GO:0010025|wax biosynthetic process GO:0010050|vegetative phase change GO:0010267|production of ta-siRNAs involved in RNA interference GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0051607|defense response to virus	NA	GO:0005737|cytoplasm GO:0005783|endoplasmic reticulum GO:0005829|cytosol
pt2_00753	A	A1S	Potri.001G037000	Potri.001G037000(AS)	POPTR_0001s07410	sp|Q9LDX1|SGS3_ARATH	Protein SUPPRESSOR OF GENE SILENCING 3 OS=Arabidopsis thaliana GN=SGS3 PE=1 SV=1	AT5G23570.1	| Symbols: SGS3, ATSGS3 | XS domain-containing protein / XS zinc finger domain-containing protein-related | chr5:7943621-7945874 FORWARD LENGTH=625	LOC_Os12g09580.1	protein|leafbladeless1, putative, expressed	NA	NA	GO:0009616|virus induced gene silencing GO:0010025|wax biosynthetic process GO:0010050|vegetative phase change GO:0010267|production of ta-siRNAs involved in RNA interference GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0051607|defense response to virus	NA	GO:0005737|cytoplasm GO:0005783|endoplasmic reticulum GO:0005829|cytosol
pt2_00754	A	A1S	Potri.001G037100	Potri.001G037100(AS)	POPTR_0001s07420	sp|A5YVF1|SGS3_SOLLC	Protein SUPPRESSOR OF GENE SILENCING 3 OS=Solanum lycopersicum GN=SGS3 PE=1 SV=1	AT5G23570.1	| Symbols: SGS3, ATSGS3 | XS domain-containing protein / XS zinc finger domain-containing protein-related | chr5:7943621-7945874 FORWARD LENGTH=625	LOC_Os12g09580.1	protein|leafbladeless1, putative, expressed	NA	NA	GO:0009616|virus induced gene silencing GO:0010025|wax biosynthetic process GO:0010050|vegetative phase change GO:0010267|production of ta-siRNAs involved in RNA interference GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0051607|defense response to virus	NA	GO:0005737|cytoplasm GO:0005783|endoplasmic reticulum GO:0005829|cytosol
pt2_00755	A	A1S	Potri.001G037200	Potri.001G037200(AS)	POPTR_0001s07430	sp|Q4KLT0|RN217_XENLA	Probable E3 ubiquitin-protein ligase RNF217 OS=Xenopus laevis GN=rnf217 PE=2 SV=1	AT3G14250.1	| Symbols: | RING/U-box superfamily protein | chr3:4745963-4746958 REVERSE LENGTH=303	LOC_Os08g35060.1	protein|protein binding protein, putative, expressed	IMGA|Medtr5g062990.1	E3 ubiquitin-protein ligase RNF19A chr5 25393017-25394131 H EGN_Mt100125 20111014	NA	GO:0008270|zinc ion binding	NA
pt2_00756	A	A1S	Potri.001G037300	Potri.001G037300(AS)	POPTR_0001s07440	sp|P93431|RCA_ORYSJ	Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2	AT1G73110.1	| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:27494344-27496844 REVERSE LENGTH=432	LOC_Os04g56320.1	protein|AAA-type ATPase family protein, putative, expressed	IMGA|Medtr5g080450.1	Ribulose-1 5-bisphosphate carboxylase/oxygenase activase chr5 33426414-33421553 F EGN_Mt100125 20111014	GO:0010027|thylakoid membrane organization GO:0016117|carotenoid biosynthetic process	GO:0005524|ATP binding GO:0016887|ATPase activity	GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane
pt2_00757	C	C1S	Potri.001G037400	Potri.001G037400(CS)	NA	NA	NA	NA	LOC_Os04g51410.1	protein|expressed protein	NA	NA	GO:0008150|biological_process GO:0015996|chlorophyll catabolic process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_00758	A	A1S	Potri.001G037500	Potri.001G037500(AS)	POPTR_0001s07460	NA	NA	AT2G24530.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G31440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr2:10422597-10423820 FORWARD LENGTH=407	LOC_Os04g56300.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00759	A	A1S	Potri.001G037600	Potri.001G037600(AS)	POPTR_0001s07470	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00760	A	A1S	Potri.001G037700	Potri.001G037700(AS)	POPTR_0001s07480	sp|Q40784|AAPC_CENCI	Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris PE=2 SV=1	AT5G57330.1	| Symbols: | Galactose mutarotase-like superfamily protein | chr5:23218392-23220664 FORWARD LENGTH=312	LOC_Os04g56290.5	protein|aldose 1-epimerase, putative, expressed	IMGA|Medtr5g009670.1	Apospory-associated protein C chr5 2153652-2151588 F EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0006012|galactose metabolic process GO:0009737|response to abscisic acid stimulus GO:0019761|glucosinolate biosynthetic process	GO:0003824|catalytic activity GO:0004034|aldose 1-epimerase activity GO:0016853|isomerase activity GO:0030246|carbohydrate binding	GO:0005829|cytosol
pt2_00761	A	A1S	Potri.001G037800	Potri.001G037800(AS)	POPTR_0001s07490	sp|Q9LTW9|FLA14_ARATH	Fasciclin-like arabinogalactan protein 14 OS=Arabidopsis thaliana GN=FLA14 PE=2 SV=1	AT3G12660.1	| Symbols: FLA14 | FASCICLIN-like arabinogalactan protein 14 precursor | chr3:4019060-4019827 FORWARD LENGTH=255	LOC_Os02g26320.1	protein|fasciclin-like arabinogalactan precursor protein, putative, expressed	IMGA|contig_248110_1.1	Fasciclin-like arabinogalactan protein contig_248110 1196-16 E PREDN 20111014	NA	GO:0003674|molecular_function	GO:0005886|plasma membrane GO:0031225|anchored to membrane
pt2_00762	A	A1S	Potri.001G037900	Potri.001G037900(AS)	POPTR_0001s07500	sp|Q551H4|FRAY2_DICDI	Serine/threonine-protein kinase fray2 OS=Dictyostelium discoideum GN=fray2 PE=3 SV=1	AT1G79640.2	| Symbols: | Protein kinase superfamily protein | chr1:29966821-29971090 REVERSE LENGTH=680	LOC_Os02g54900.1	protein|STE_PAK_Ste20_STLK.2 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	IMGA|Medtr5g045190.1	Serine/threonine protein kinase chr5 19408593-19396721 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus
pt2_00763	A	A1S	Potri.001G037900	Potri.001G037900(AS)	POPTR_0001s07500	sp|Q551H4|FRAY2_DICDI	Serine/threonine-protein kinase fray2 OS=Dictyostelium discoideum GN=fray2 PE=3 SV=1	AT1G79640.2	| Symbols: | Protein kinase superfamily protein | chr1:29966821-29971090 REVERSE LENGTH=680	LOC_Os02g54900.1	protein|STE_PAK_Ste20_STLK.2 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	IMGA|Medtr5g045190.1	Serine/threonine protein kinase chr5 19408593-19396721 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus
pt2_00764	A	A2S	Potri.001G038000	Potri.001G038000(AS) Potri.003G186600(BS)	POPTR_0001s07510	sp|Q84L33|RD23A_ARATH	Putative DNA repair protein RAD23-1 OS=Arabidopsis thaliana GN=RAD23-1 PE=2 SV=3	AT1G79650.1	| Symbols: RAD23, RAD23B | Rad23 UV excision repair protein family | chr1:29972406-29975132 REVERSE LENGTH=371	LOC_Os02g08300.2	protein|RAD23 DNA repair protein, putative, expressed	NA	NA	GO:0006259|DNA metabolic process GO:0006284|base-excision repair GO:0006289|nucleotide-excision repair GO:0007126|meiosis GO:0033044|regulation of chromosome organization GO:0043161|proteasomal ubiquitin-dependent protein catabolic process	GO:0003684|damaged DNA binding GO:0043130|ubiquitin binding GO:0070628|proteasome binding	GO:0005634|nucleus
pt2_00765	A	A1S	Potri.001G038000	Potri.001G038000(AS)	POPTR_0001s07510	sp|Q84L33|RD23A_ARATH	Putative DNA repair protein RAD23-1 OS=Arabidopsis thaliana GN=RAD23-1 PE=2 SV=3	AT1G79650.1	| Symbols: RAD23, RAD23B | Rad23 UV excision repair protein family | chr1:29972406-29975132 REVERSE LENGTH=371	LOC_Os02g08300.2	protein|RAD23 DNA repair protein, putative, expressed	NA	NA	GO:0006259|DNA metabolic process GO:0006284|base-excision repair GO:0006289|nucleotide-excision repair GO:0007126|meiosis GO:0033044|regulation of chromosome organization GO:0043161|proteasomal ubiquitin-dependent protein catabolic process	GO:0003684|damaged DNA binding GO:0043130|ubiquitin binding GO:0070628|proteasome binding	GO:0005634|nucleus
pt2_00766	A	A2S	Potri.001G038100	Potri.001G038100(AS) Potri.003G186500(BS)	POPTR_0001s07520	sp|A7S4N4|SERIC_NEMVE	Probable serine incorporator OS=Nematostella vectensis GN=serinc PE=3 SV=1	AT1G16180.2	| Symbols: | Serinc-domain containing serine and sphingolipid biosynthesis protein | chr1:5540905-5542670 FORWARD LENGTH=412	LOC_Os02g54990.2	protein|TMS membrane protein/tumour differentially expressed protein, putative, expressed	IMGA|contig_11113_1.1	Serine incorporator contig_11113 108-2186 E PREDN 20111014	GO:0006623|protein targeting to vacuole GO:0016192|vesicle-mediated transport	GO:0003674|molecular_function	GO:0016020|membrane
pt2_00767	A	A6S	Potri.001G038900	Potri.001G038900(AS) Potri.001G038200(AS) Potri.001G039700(AS) Potri.001G040300(BS) Potri.001G038400(BS) Potri.003G186400(DS)	POPTR_0001s07530	NA	NA	AT1G16170.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G79660.1); Has 55 Blast hits to 55 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:5538874-5539152 REVERSE LENGTH=92	LOC_Os08g16559.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_00768	B	B5S	Potri.T132900	Potri.T132900(BS) Potri.001G040500(BS) Potri.001G038300(BS) Potri.T166600(DS) Potri.001G040800(DS)	POPTR_0001s07540	sp|Q9SA25|WAKLG_ARATH	Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1	AT1G16260.2	| Symbols: | Wall-associated kinase family protein | chr1:5559708-5562018 REVERSE LENGTH=720	LOC_Os04g55760.1	protein|OsWAK55 - OsWAK receptor-like protein kinase, expressed	IMGA|Medtr5g018570.1	Kinase-like protein chr5 6674294-6679204 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0010200|response to chitin GO:0046777|protein autophosphorylation GO:0050832|defense response to fungus	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005509|calcium ion binding GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0016021|integral to membrane
pt2_00769	B	B5S	Potri.T132900	Potri.T132900(BS) Potri.T166600(BS) Potri.001G038300(BS) Potri.001G039900(BS) Potri.001G040800(BS)	POPTR_0001s07550	sp|Q9SA25|WAKLG_ARATH	Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1	AT1G16260.2	| Symbols: | Wall-associated kinase family protein | chr1:5559708-5562018 REVERSE LENGTH=720	LOC_Os04g55760.1	protein|OsWAK55 - OsWAK receptor-like protein kinase, expressed	IMGA|Medtr5g018570.1	Kinase-like protein chr5 6674294-6679204 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0010200|response to chitin GO:0046777|protein autophosphorylation GO:0050832|defense response to fungus	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005509|calcium ion binding GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0016021|integral to membrane
pt2_00770	A	A5S	Potri.001G038700	Potri.001G038700(AS) Potri.001G039300(AS) Potri.T132900(DS) Potri.T166600(DS) Potri.001G040800(DS)	POPTR_0001s07560	sp|Q9SA25|WAKLG_ARATH	Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1	AT1G16260.2	| Symbols: | Wall-associated kinase family protein | chr1:5559708-5562018 REVERSE LENGTH=720	LOC_Os02g02120.1	protein|OsWAK11 - OsWAK receptor-like protein kinase, expressed	IMGA|contig_165180_1.1	Protein kinase family protein contig_165180 198-1567 H PREDN 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005509|calcium ion binding GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005576|extracellular region GO:0016021|integral to membrane
pt2_00771	A	A3S	Potri.001G040400	Potri.001G040400(AS) Potri.001G039000(AS) Potri.001G038500(BS)	POPTR_0001s07580	sp|Q9FMS6|CAF1K_ARATH	Probable CCR4-associated factor 1 homolog 11 OS=Arabidopsis thaliana GN=CAF1-11 PE=2 SV=1	AT5G22250.1	| Symbols: | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr5:7365605-7366441 REVERSE LENGTH=278	LOC_Os02g55300.1	protein|CAF1 family ribonuclease containing protein, putative, expressed	IMGA|Medtr5g097430.1	CCR4-associated factor chr5 41638347-41640331 E EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0000289|nuclear-transcribed mRNA poly(A) tail shortening GO:0002679|respiratory burst involved in defense response GO:0009451|RNA modification GO:0009693|ethylene biosynthetic process GO:0009738|abscisic acid mediated signaling pathway GO:0009814|defense response, incompatible interaction GO:0009873|ethylene mediated signaling pathway GO:0010200|response to chitin GO:0010228|vegetative to reproductive phase transition of meristem GO:0035556|intracellular signal transduction GO:0042742|defense response to bacterium	GO:0003676|nucleic acid binding GO:0004540|ribonuclease activity GO:0008408|3'-5' exonuclease activity	GO:0005634|nucleus
pt2_00772	A	A3S	Potri.001G040600	Potri.001G040600(AS) Potri.001G039100(AS) Potri.001G039800(BS)	POPTR_0001s07590	sp|Q9SA25|WAKLG_ARATH	Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1	AT1G16260.2	| Symbols: | Wall-associated kinase family protein | chr1:5559708-5562018 REVERSE LENGTH=720	LOC_Os02g56420.1	protein|OsWAK23 - OsWAK short gene, expressed	IMGA|contig_165180_1.1	Protein kinase family protein contig_165180 198-1567 H PREDN 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005509|calcium ion binding GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005576|extracellular region GO:0016021|integral to membrane
pt2_00773	G	G2	NA	NA	POPTR_0001s07600	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00774	B	B7S	Potri.001G039200	Potri.001G039200(BS) Potri.001G040800(BS) Potri.T132900(DS) Potri.T166600(DS) Potri.001G040500(DS) Potri.001G038300(DS) Potri.001G039900(DS)	POPTR_0001s07620	sp|Q9SA25|WAKLG_ARATH	Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1	AT1G16260.2	| Symbols: | Wall-associated kinase family protein | chr1:5559708-5562018 REVERSE LENGTH=720	LOC_Os02g02120.1	protein|OsWAK11 - OsWAK receptor-like protein kinase, expressed	IMGA|Medtr5g018570.1	Kinase-like protein chr5 6674294-6679204 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005509|calcium ion binding GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005576|extracellular region GO:0016021|integral to membrane
pt2_00775	A	A2S	Potri.001G040900	Potri.001G040900(AS) Potri.001G040000(DS)	POPTR_0001s07630	sp|Q7X8C5|WAKLB_ARATH	Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1	AT1G16130.1	| Symbols: WAKL2 | wall associated kinase-like 2 | chr1:5525634-5528047 FORWARD LENGTH=748	LOC_Os01g26300.1	protein|OsWAK9 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed	IMGA|Medtr5g018570.1	Kinase-like protein chr5 6674294-6679204 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005509|calcium ion binding GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005576|extracellular region GO:0016021|integral to membrane
pt2_00776	A	A2S	Potri.001G041000	Potri.001G041000(AS) Potri.T132700(BS)	POPTR_0001s07640	sp|Q9SA25|WAKLG_ARATH	Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1	AT1G16260.2	| Symbols: | Wall-associated kinase family protein | chr1:5559708-5562018 REVERSE LENGTH=720	LOC_Os09g38800.1	protein|OsWAK88 - OsWAK pseudogene, expressed	IMGA|contig_165180_1.1	Protein kinase family protein contig_165180 198-1567 H PREDN 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005509|calcium ion binding GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005576|extracellular region GO:0016021|integral to membrane
pt2_00777	A	A4S	Potri.T132700	Potri.T132700(AS) Potri.001G041100(AS) Potri.001G040000(BS) Potri.001G040900(BS)	POPTR_0001s07650	sp|Q8RY17|WAKLI_ARATH	Wall-associated receptor kinase-like 22 OS=Arabidopsis thaliana GN=WAKL22 PE=2 SV=1	AT1G79670.1	| Symbols: RFO1, WAKL22 | Wall-associated kinase family protein | chr1:29976887-29979337 REVERSE LENGTH=751	LOC_Os04g55760.1	protein|OsWAK55 - OsWAK receptor-like protein kinase, expressed	IMGA|Medtr5g018570.1	Kinase-like protein chr5 6674294-6679204 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005509|calcium ion binding GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005576|extracellular region GO:0016021|integral to membrane
pt2_00778	A	A3S	Potri.T132600	Potri.T132600(AS) Potri.001G040100(AS) Potri.001G041200(BS)	POPTR_0001s07660	NA	NA	AT1G16080.1	| Symbols: | unknown protein; LOCATED IN: apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 81 Blast hits to 81 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). | chr1:5514394-5515761 FORWARD LENGTH=313	LOC_Os08g16570.1	protein|expressed protein	NA	NA	GO:0006098|pentose-phosphate shunt GO:0009965|leaf morphogenesis GO:0010027|thylakoid membrane organization GO:0016117|carotenoid biosynthetic process GO:0030154|cell differentiation	NA	GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope GO:0048046|apoplast
pt2_00779	A	A3S	Potri.001G040400	Potri.001G040400(AS) Potri.001G038500(AS) Potri.001G039000(BS)	POPTR_0001s07680	sp|Q9FMS6|CAF1K_ARATH	Probable CCR4-associated factor 1 homolog 11 OS=Arabidopsis thaliana GN=CAF1-11 PE=2 SV=1	AT5G22250.1	| Symbols: | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr5:7365605-7366441 REVERSE LENGTH=278	LOC_Os02g55300.1	protein|CAF1 family ribonuclease containing protein, putative, expressed	IMGA|Medtr5g097430.1	CCR4-associated factor chr5 41638347-41640331 E EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0000289|nuclear-transcribed mRNA poly(A) tail shortening GO:0002679|respiratory burst involved in defense response GO:0009451|RNA modification GO:0009693|ethylene biosynthetic process GO:0009738|abscisic acid mediated signaling pathway GO:0009814|defense response, incompatible interaction GO:0009873|ethylene mediated signaling pathway GO:0010200|response to chitin GO:0010228|vegetative to reproductive phase transition of meristem GO:0035556|intracellular signal transduction GO:0042742|defense response to bacterium	GO:0003676|nucleic acid binding GO:0004540|ribonuclease activity GO:0008408|3'-5' exonuclease activity	GO:0005634|nucleus
pt2_00780	A	A4S	Potri.001G040600	Potri.001G040600(AS) Potri.001G039100(AS) Potri.001G038600(AS) Potri.001G039800(DS)	POPTR_0001s07690	sp|Q9SA25|WAKLG_ARATH	Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1	AT1G16260.2	| Symbols: | Wall-associated kinase family protein | chr1:5559708-5562018 REVERSE LENGTH=720	LOC_Os02g56420.1	protein|OsWAK23 - OsWAK short gene, expressed	IMGA|contig_165180_1.1	Protein kinase family protein contig_165180 198-1567 H PREDN 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005509|calcium ion binding GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005576|extracellular region GO:0016021|integral to membrane
pt2_00781	A	A1S	Potri.001G119900	Potri.001G119900(AS)	POPTR_0001s07700	NA	NA	AT4G12410.1	| Symbols: | SAUR-like auxin-responsive protein family | chr4:7342956-7343429 REVERSE LENGTH=157	LOC_Os02g42990.1	protein|OsSAUR11 - Auxin-responsive SAUR gene family member, expressed	IMGA|Medtr5g021820.1	Auxin-induced protein 6B chr5 8253943-8253169 F EGN_Mt100125 20111014	GO:0009733|response to auxin stimulus	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_00782	A	A1S	Potri.001G119800	Potri.001G119800(AS)	POPTR_0001s07710	sp|P49042|VPE_RICCO	Vacuolar-processing enzyme OS=Ricinus communis PE=1 SV=1	AT1G62710.1	| Symbols: BETA-VPE, BETAVPE | beta vacuolar processing enzyme | chr1:23224070-23226857 REVERSE LENGTH=486	LOC_Os02g43010.1	protein|vacuolar-processing enzyme precursor, putative, expressed	IMGA|contig_50759_1.1	GPI-anchor transamidase contig_50759 196-1875 H PREDN 20111014	GO:0006508|proteolysis GO:0006624|vacuolar protein processing	GO:0004197|cysteine-type endopeptidase activity	NA
pt2_00783	C	C1S	Potri.001G119800	Potri.001G119800(CS)	sp|P49042|VPE_RICCO	Vacuolar-processing enzyme OS=Ricinus communis PE=1 SV=1	AT1G62710.1	| Symbols: BETA-VPE, BETAVPE | beta vacuolar processing enzyme | chr1:23224070-23226857 REVERSE LENGTH=486	LOC_Os02g43010.1	protein|vacuolar-processing enzyme precursor, putative, expressed	IMGA|contig_50759_1.1	GPI-anchor transamidase contig_50759 196-1875 H PREDN 20111014	GO:0006508|proteolysis GO:0006624|vacuolar protein processing	GO:0004197|cysteine-type endopeptidase activity	NA
pt2_00784	A	A1S	Potri.001G119700	Potri.001G119700(AS)	POPTR_0001s07730	sp|A7YVD7|NDUF6_BOVIN	NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Bos taurus GN=NDUFAF6 PE=2 SV=1	AT1G62730.1	| Symbols: | Terpenoid synthases superfamily protein | chr1:23229204-23230118 REVERSE LENGTH=304	LOC_Os06g01470.1	protein|AGAP000326-PA, putative, expressed	IMGA|Medtr5g012060.1	hypothetical protein chr5 3321442-3325626 E EGN_Mt100125 20111014	GO:0006457|protein folding GO:0006626|protein targeting to mitochondrion GO:0009058|biosynthetic process GO:0009408|response to heat GO:0009644|response to high light intensity GO:0042542|response to hydrogen peroxide	GO:0016740|transferase activity	GO:0009507|chloroplast
pt2_00785	A	A1S	Potri.001G119600	Potri.001G119600(AS)	POPTR_0001s07740	NA	NA	NA	NA	LOC_Os08g34300.1	protein|retrotransposon protein, putative, unclassified, expressed	NA	NA	NA	NA	NA
pt2_00786	A	A1S	Potri.001G119500	Potri.001G119500(AS)	POPTR_0001s07750	sp|Q43468|STIP_SOYBN	Heat shock protein STI OS=Glycine max GN=STI PE=2 SV=1	AT4G12400.2	| Symbols: Hop3 | stress-inducible protein, putative | chr4:7338866-7341239 REVERSE LENGTH=558	LOC_Os02g43020.1	protein|heat shock protein STI, putative, expressed	IMGA|Medtr5g012030.1	Stress-induced-phosphoprotein chr5 3312809-3308439 F EGN_Mt100125 20111014	GO:0006457|protein folding GO:0006950|response to stress GO:0009408|response to heat GO:0009644|response to high light intensity GO:0010286|heat acclimation GO:0034976|response to endoplasmic reticulum stress GO:0042542|response to hydrogen peroxide	NA	NA
pt2_00787	A	A2S	Potri.001G119500	Potri.001G119500(AS) Potri.003G113400(DS)	POPTR_0001s07750	sp|Q43468|STIP_SOYBN	Heat shock protein STI OS=Glycine max GN=STI PE=2 SV=1	AT4G12400.2	| Symbols: Hop3 | stress-inducible protein, putative | chr4:7338866-7341239 REVERSE LENGTH=558	LOC_Os02g43020.1	protein|heat shock protein STI, putative, expressed	IMGA|Medtr5g012030.1	Stress-induced-phosphoprotein chr5 3312809-3308439 F EGN_Mt100125 20111014	GO:0006457|protein folding GO:0006950|response to stress GO:0009408|response to heat GO:0009644|response to high light intensity GO:0010286|heat acclimation GO:0034976|response to endoplasmic reticulum stress GO:0042542|response to hydrogen peroxide	NA	NA
pt2_00788	A	A1S	Potri.001G119500	Potri.001G119500(AS)	POPTR_0001s07750	sp|Q43468|STIP_SOYBN	Heat shock protein STI OS=Glycine max GN=STI PE=2 SV=1	AT4G12400.2	| Symbols: Hop3 | stress-inducible protein, putative | chr4:7338866-7341239 REVERSE LENGTH=558	LOC_Os02g43020.1	protein|heat shock protein STI, putative, expressed	IMGA|Medtr5g012030.1	Stress-induced-phosphoprotein chr5 3312809-3308439 F EGN_Mt100125 20111014	GO:0006457|protein folding GO:0006950|response to stress GO:0009408|response to heat GO:0009644|response to high light intensity GO:0010286|heat acclimation GO:0034976|response to endoplasmic reticulum stress GO:0042542|response to hydrogen peroxide	NA	NA
pt2_00789	A	A1S	Potri.001G119400	Potri.001G119400(AS)	POPTR_0001s07770	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00790	A	A1S	Potri.001G119300	Potri.001G119300(AS)	POPTR_0001s07780	sp|P17407|21KD_DAUCA	21 kDa protein OS=Daucus carota PE=2 SV=1	AT1G62760.1	| Symbols: | Plant invertase/pectin methylesterase inhibitor superfamily protein | chr1:23237574-23238512 REVERSE LENGTH=312	LOC_Os06g49760.1	protein|invertase/pectin methylesterase inhibitor family protein, putative, expressed	IMGA|Medtr5g012000.1	Pectinesterase chr5 3301058-3301989 F EGN_Mt100125 20111014	NA	GO:0004857|enzyme inhibitor activity GO:0030599|pectinesterase activity GO:0046910|pectinesterase inhibitor activity	GO:0005886|plasma membrane
pt2_00791	A	A1S	Potri.001G119200	Potri.001G119200(AS)	POPTR_0001s07790	sp|P17407|21KD_DAUCA	21 kDa protein OS=Daucus carota PE=2 SV=1	AT1G62770.1	| Symbols: | Plant invertase/pectin methylesterase inhibitor superfamily protein | chr1:23246085-23246836 REVERSE LENGTH=204	LOC_Os06g49760.1	protein|invertase/pectin methylesterase inhibitor family protein, putative, expressed	IMGA|Medtr5g012000.1	Pectinesterase chr5 3301058-3301989 F EGN_Mt100125 20111014	GO:0010014|meristem initiation GO:0010089|xylem development	GO:0004857|enzyme inhibitor activity GO:0030599|pectinesterase activity GO:0046910|pectinesterase inhibitor activity	NA
pt2_00792	A	A1S	Potri.001G119100	Potri.001G119100(AS)	POPTR_0001s07800	NA	NA	AT1G62780.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; Has 94 Blast hits to 94 proteins in 35 species: Archae - 6; Bacteria - 10; Metazoa - 21; Fungi - 2; Plants - 48; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). | chr1:23249349-23251066 REVERSE LENGTH=237	LOC_Os04g01540.1	protein|expressed protein	IMGA|Medtr5g011990.1	hypothetical protein chr5 3298110-3300397 F EGN_Mt100125 20111014	GO:0000023|maltose metabolic process GO:0006098|pentose-phosphate shunt GO:0008150|biological_process GO:0009902|chloroplast relocation GO:0010027|thylakoid membrane organization GO:0019252|starch biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0034660|ncRNA metabolic process	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_00793	A	A1S	Potri.001G119000	Potri.001G119000(AS)	POPTR_0001s07810	sp|Q9FFY3|VAS_ARATH	Lipid transfer-like protein VAS OS=Arabidopsis thaliana GN=VAS PE=2 SV=1	AT1G62790.2	| Symbols: | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr1:23252369-23253481 FORWARD LENGTH=149	LOC_Os06g47200.1	protein|LTPL85 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	IMGA|Medtr5g011950.1	Lipid binding protein chr5 3284359-3281892 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006869|lipid transport	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004675|transmembrane receptor protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0008289|lipid binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane GO:0031225|anchored to membrane
pt2_00794	A	A2S	Potri.001G118900	Potri.001G118900(AS) Potri.003G114000(DS)	POPTR_0001s07820	sp|Q93YR3|F10AL_ARATH	FAM10 family protein At4g22670 OS=Arabidopsis thaliana GN=At4g22670 PE=1 SV=1	AT4G22670.1	| Symbols: AtHip1, HIP1, TPR11 | HSP70-interacting protein 1 | chr4:11918236-11920671 FORWARD LENGTH=441	LOC_Os02g01030.4	protein|tetratricopeptide repeat domain containing protein, expressed	IMGA|Medtr5g012030.1	Stress-induced-phosphoprotein chr5 3312809-3308439 F EGN_Mt100125 20111014	GO:0006457|protein folding GO:0010286|heat acclimation GO:0045454|cell redox homeostasis GO:0046686|response to cadmium ion GO:0051259|protein oligomerization	GO:0005515|protein binding GO:0016671|oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor GO:0030544|Hsp70 protein binding	GO:0005575|cellular_component GO:0005737|cytoplasm GO:0005829|cytosol
pt2_00795	A	A1S	Potri.001G118800	Potri.001G118800(AS)	POPTR_0001s07830	sp|Q50EX6|ODO1_PETHY	Protein ODORANT1 OS=Petunia hybrida GN=ODO1 PE=2 SV=1	AT4G12350.1	| Symbols: MYB42, AtMYB42 | myb domain protein 42 | chr4:7324912-7326636 FORWARD LENGTH=286	LOC_Os09g36250.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr5g078140.1	P-type R2R3 Myb protein chr5 32379000-32381283 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:2000652|regulation of secondary cell wall biogenesis	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00796	A	A1S	Potri.001G118700	Potri.001G118700(AS)	POPTR_0001s07840	NA	NA	AT4G12340.1	| Symbols: | copper ion binding | chr4:7321492-7322004 REVERSE LENGTH=170	LOC_Os05g01300.1	protein|expressed protein	IMGA|contig_51980_2.1	CHCH domain containing protein contig_51980 143-4789 F PREDN 20111014	GO:0008150|biological_process	GO:0005507|copper ion binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00797	A	A1S	Potri.001G118500	Potri.001G118500(AS)	POPTR_0001s07850	sp|P37120|C75A2_SOLME	Flavonoid 3',5'-hydroxylase OS=Solanum melongena GN=CYP75A2 PE=2 SV=1	AT4G12320.1	| Symbols: CYP706A6 | cytochrome P450, family 706, subfamily A, polypeptide 6 | chr4:7314939-7316647 REVERSE LENGTH=518	LOC_Os08g43440.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g007460.1	Cytochrome P450 monooxygenase chr5 1131766-1133659 E EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005783|endoplasmic reticulum GO:0009507|chloroplast
pt2_00798	A	A1S	Potri.001G118400	Potri.001G118400(AS)	POPTR_0001s07860	sp|Q42798|C93A1_SOYBN	Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=2 SV=1	AT4G12300.1	| Symbols: CYP706A4 | cytochrome P450, family 706, subfamily A, polypeptide 4 | chr4:7308016-7309692 REVERSE LENGTH=516	LOC_Os01g50490.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g007460.1	Cytochrome P450 monooxygenase chr5 1131766-1133659 E EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_00799	A	A1S	Potri.001G118300	Potri.001G118300(AS)	POPTR_0001s07870	sp|Q8H1H9|AMO_ARATH	Primary amine oxidase OS=Arabidopsis thaliana GN=At1g62810 PE=2 SV=1	AT4G12290.1	| Symbols: | Copper amine oxidase family protein | chr4:7304434-7306973 FORWARD LENGTH=741	LOC_Os04g20164.1	protein|amine oxidase precursor, putative, expressed	IMGA|Medtr1g104590.1	Primary amine oxidase chr1 30734464-30731628 E EGN_Mt100125 20111014	GO:0009308|amine metabolic process GO:0055114|oxidation-reduction process	GO:0005507|copper ion binding GO:0008131|primary amine oxidase activity GO:0048038|quinone binding	GO:0005576|extracellular region GO:0005768|endosome GO:0005773|vacuole GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_00800	A	A1S	Potri.001G118200	Potri.001G118200(AS)	POPTR_0001s07880	sp|Q8H1H9|AMO_ARATH	Primary amine oxidase OS=Arabidopsis thaliana GN=At1g62810 PE=2 SV=1	AT1G62810.1	| Symbols: | Copper amine oxidase family protein | chr1:23258253-23261772 REVERSE LENGTH=712	LOC_Os04g20164.1	protein|amine oxidase precursor, putative, expressed	IMGA|Medtr1g104590.1	Primary amine oxidase chr1 30734464-30731628 E EGN_Mt100125 20111014	GO:0006809|nitric oxide biosynthetic process GO:0009308|amine metabolic process GO:0009738|abscisic acid mediated signaling pathway GO:0055114|oxidation-reduction process	GO:0005507|copper ion binding GO:0008131|primary amine oxidase activity GO:0048038|quinone binding	GO:0005576|extracellular region
pt2_00801	A	A1S	Potri.001G118100	Potri.001G118100(AS)	POPTR_0001s07890	sp|P42798|R15A1_ARATH	40S ribosomal protein S15a-1 OS=Arabidopsis thaliana GN=RPS15AA PE=2 SV=2	AT5G59850.1	| Symbols: | Ribosomal protein S8 family protein | chr5:24112499-24113084 REVERSE LENGTH=130	LOC_Os02g27760.1	protein|40S ribosomal protein S15a, putative, expressed	IMGA|Medtr1g105370.1	40S ribosomal protein S15a chr1 31153886-31151645 E EGN_Mt100125 20111014	GO:0001510|RNA methylation GO:0006412|translation GO:0009664|plant-type cell wall organization GO:0042545|cell wall modification	GO:0003735|structural constituent of ribosome	GO:0005618|cell wall GO:0005622|intracellular GO:0005774|vacuolar membrane GO:0005829|cytosol GO:0005840|ribosome GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0009507|chloroplast GO:0016020|membrane GO:0022626|cytosolic ribosome GO:0022627|cytosolic small ribosomal subunit
pt2_00802	A	A1S	Potri.001G118000	Potri.001G118000(AS)	POPTR_0001s07900	sp|Q8MJJ1|SPG21_BOVIN	Maspardin OS=Bos taurus GN=SPG21 PE=2 SV=1	AT4G12230.1	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr4:7284645-7287348 FORWARD LENGTH=392	LOC_Os10g08840.2	protein|hydrolase, alpha/beta fold family domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003824|catalytic activity	GO:0005737|cytoplasm
pt2_00803	C	C1A	Potri.001G118000	Potri.001G118000(CA)	sp|Q8MJJ1|SPG21_BOVIN	Maspardin OS=Bos taurus GN=SPG21 PE=2 SV=1	AT4G12230.1	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr4:7284645-7287348 FORWARD LENGTH=392	LOC_Os10g08840.2	protein|hydrolase, alpha/beta fold family domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0003824|catalytic activity	GO:0005737|cytoplasm
pt2_00804	A	A1S	Potri.001G117900	Potri.001G117900(AS)	POPTR_0001s07920	sp|Q94AZ4|CML13_ARATH	Probable calcium-binding protein CML13 OS=Arabidopsis thaliana GN=CML13 PE=1 SV=1	AT1G12310.1	| Symbols: | Calcium-binding EF-hand family protein | chr1:4187500-4187946 REVERSE LENGTH=148	LOC_Os08g02420.1	protein|OsCML7 - Calmodulin-related calcium sensor protein, expressed	IMGA|Medtr5g011850.1	EF hand family protein chr5 3229722-3230672 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0005509|calcium ion binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane
pt2_00805	A	A2S	Potri.001G117800	Potri.001G117800(AS) Potri.003G115100(DS)	POPTR_0001s07930	sp|Q6R2J8|SRF8_ARATH	Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1	AT4G22730.1	| Symbols: | Leucine-rich repeat protein kinase family protein | chr4:11941384-11943696 FORWARD LENGTH=688	LOC_Os06g04370.1	protein|expressed protein	IMGA|Medtr5g011840.1	Receptor-like protein kinase chr5 3227916-3224655 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_00806	A	A1S	Potri.001G117700	Potri.001G117700(AS)	POPTR_0001s07940	sp|Q4P7A4|CAF17_USTMA	Putative transferase CAF17, mitochondrial OS=Ustilago maydis (strain 521 / FGSC 9021) GN=CAF17 PE=3 SV=1	AT4G12130.1	| Symbols: | Glycine cleavage T-protein family | chr4:7263640-7265425 FORWARD LENGTH=393	LOC_Os06g04380.1	protein|aminomethyltransferase, putative, expressed	NA	NA	GO:0006546|glycine catabolic process GO:0019243|methylglyoxal catabolic process to D-lactate	GO:0004047|aminomethyltransferase activity	GO:0005737|cytoplasm GO:0005739|mitochondrion
pt2_00807	A	A2S	Potri.001G117600	Potri.001G117600(AS) Potri.003G115200(DS)	POPTR_0001s07950	NA	NA	AT2G45360.1	| Symbols: | Protein of unknown function (DUF1442) | chr2:18698619-18699360 FORWARD LENGTH=215	LOC_Os02g25780.1	protein|expressed protein	IMGA|Medtr5g011800.1	hypothetical protein chr5 3209629-3208620 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_00808	A	A1S	Potri.001G117500	Potri.001G117500(AS)	POPTR_0001s07970	sp|Q8R035|ICT1_MOUSE	Peptidyl-tRNA hydrolase ICT1, mitochondrial OS=Mus musculus GN=Ict1 PE=1 SV=1	AT1G62850.3	| Symbols: | Class I peptide chain release factor | chr1:23272608-23274211 REVERSE LENGTH=236	LOC_Os03g14510.1	protein|immature colon carcinoma transcript 1 protein precursor, putative, expressed	NA	NA	GO:0006415|translational termination	GO:0003747|translation release factor activity	GO:0005739|mitochondrion
pt2_00809	A	A1S	Potri.001G117400	Potri.001G117400(AS)	POPTR_0001s07980	NA	NA	AT4G22740.2	| Symbols: | glycine-rich protein | chr4:11944050-11945565 REVERSE LENGTH=356	LOC_Os08g02460.1	protein|expressed protein	NA	NA	NA	GO:0003674|molecular_function	GO:0005886|plasma membrane
pt2_00810	A	A1S	Potri.001G117200	Potri.001G117200(AS)	POPTR_0001s07990	sp|Q94AH6|CUL1_ARATH	Cullin-1 OS=Arabidopsis thaliana GN=CUL1 PE=1 SV=1	AT4G02570.4	| Symbols: CUL1 | cullin 1 | chr4:1129315-1133435 FORWARD LENGTH=738	LOC_Os01g27150.1	protein|cullin, putative, expressed	IMGA|Medtr5g039880.1	Cullin 3-like protein chr5 17133647-17138844 E EGN_Mt100125 20111014	GO:0006396|RNA processing GO:0006486|protein glycosylation GO:0006499|N-terminal protein myristoylation GO:0006511|ubiquitin-dependent protein catabolic process GO:0006888|ER to Golgi vesicle-mediated transport GO:0007062|sister chromatid cohesion GO:0009733|response to auxin stimulus GO:0009753|response to jasmonic acid stimulus GO:0009790|embryo development GO:0009793|embryo development ending in seed dormancy GO:0009867|jasmonic acid mediated signaling pathway GO:0009880|embryonic pattern specification GO:0010072|primary shoot apical meristem specification GO:0010162|seed dormancy process GO:0010265|SCF complex assembly GO:0010431|seed maturation GO:0010564|regulation of cell cycle process GO:0042752|regulation of circadian rhythm GO:0043090|amino acid import GO:0045595|regulation of cell differentiation GO:0048316|seed development GO:0048366|leaf development GO:0048825|cotyledon development	GO:0005515|protein binding GO:0031625|ubiquitin protein ligase binding	GO:0000151|ubiquitin ligase complex GO:0000794|condensed nuclear chromosome GO:0005634|nucleus GO:0005737|cytoplasm GO:0005819|spindle GO:0005829|cytosol GO:0009524|phragmoplast
pt2_00811	A	A1S	Potri.001G117100	Potri.001G117100(AS)	POPTR_0001s08000	sp|Q8VYP5|ZDH14_ARATH	Probable S-acyltransferase At3g60800 OS=Arabidopsis thaliana GN=At3g60800 PE=2 SV=1	AT3G60800.1	| Symbols: | DHHC-type zinc finger family protein | chr3:22467486-22469273 REVERSE LENGTH=307	LOC_Os03g58960.1	protein|DHHC zinc finger domain containing protein, expressed	IMGA|Medtr1g098390.1	Palmitoyltransferase SWF1 chr1 28233746-28237541 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0008270|zinc ion binding	GO:0005794|Golgi apparatus
pt2_00812	A	A1S	Potri.001G117000	Potri.001G117000(AS)	POPTR_0001s08010	NA	NA	AT1G12330.1	| Symbols: | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G12900.1); Has 249 Blast hits to 249 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 14; Plants - 217; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). | chr1:4194673-4196627 FORWARD LENGTH=505	LOC_Os08g39740.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	NA	GO:0009507|chloroplast
pt2_00813	A	A2S	Potri.001G116900	Potri.001G116900(AS) Potri.003G115800(DS)	POPTR_0001s08020	sp|Q9C5X3|KEULE_ARATH	SNARE-interacting protein KEULE OS=Arabidopsis thaliana GN=KEU PE=1 SV=2	AT1G12360.1	| Symbols: KEU | Sec1/munc18-like (SM) proteins superfamily | chr1:4201172-4206144 FORWARD LENGTH=666	LOC_Os02g25580.1	protein|Sec1 family transport protein, putative, expressed	IMGA|Medtr5g011790.1	SNARE-interacting protein KEULE chr5 3206430-3198451 F EGN_Mt100125 20111014	GO:0006623|protein targeting to vacuole GO:0006904|vesicle docking involved in exocytosis GO:0006944|cellular membrane fusion GO:0009306|protein secretion GO:0010200|response to chitin GO:0016192|vesicle-mediated transport GO:0030968|endoplasmic reticulum unfolded protein response GO:0048193|Golgi vesicle transport	GO:0005515|protein binding GO:0008565|protein transporter activity	GO:0005773|vacuole GO:0005829|cytosol GO:0005886|plasma membrane GO:0019898|extrinsic to membrane
pt2_00814	A	A1S	Potri.001G116800	Potri.001G116800(AS)	POPTR_0001s08030	sp|Q9SB00|PHR_ARATH	Deoxyribodipyrimidine photo-lyase OS=Arabidopsis thaliana GN=PHR1 PE=2 SV=1	AT1G12370.2	| Symbols: PHR1, UVR2 | photolyase 1 | chr1:4206500-4208842 REVERSE LENGTH=496	LOC_Os10g08580.1	protein|FAD binding domain of DNA photolyase domain containing protein, expressed	IMGA|Medtr5g011780.1	CPD photolyase chr5 3193863-3197043 E EGN_Mt100125 20111014	GO:0000719|photoreactive repair GO:0006281|DNA repair GO:0009650|UV protection	GO:0003904|deoxyribodipyrimidine photo-lyase activity GO:0003913|DNA photolyase activity	NA
pt2_00815	A	A1S	Potri.001G116800	Potri.001G116800(AS)	POPTR_0001s08030	sp|Q9SB00|PHR_ARATH	Deoxyribodipyrimidine photo-lyase OS=Arabidopsis thaliana GN=PHR1 PE=2 SV=1	AT1G12370.2	| Symbols: PHR1, UVR2 | photolyase 1 | chr1:4206500-4208842 REVERSE LENGTH=496	LOC_Os10g08580.1	protein|FAD binding domain of DNA photolyase domain containing protein, expressed	IMGA|Medtr5g011780.1	CPD photolyase chr5 3193863-3197043 E EGN_Mt100125 20111014	GO:0000719|photoreactive repair GO:0006281|DNA repair GO:0009650|UV protection	GO:0003904|deoxyribodipyrimidine photo-lyase activity GO:0003913|DNA photolyase activity	NA
pt2_00816	A	A2S	Potri.001G116800	Potri.001G116800(AS) Potri.001G116900(AA)	POPTR_0001s08030	sp|Q9SB00|PHR_ARATH	Deoxyribodipyrimidine photo-lyase OS=Arabidopsis thaliana GN=PHR1 PE=2 SV=1	AT1G12370.2	| Symbols: PHR1, UVR2 | photolyase 1 | chr1:4206500-4208842 REVERSE LENGTH=496	LOC_Os10g08580.1	protein|FAD binding domain of DNA photolyase domain containing protein, expressed	IMGA|Medtr5g011780.1	CPD photolyase chr5 3193863-3197043 E EGN_Mt100125 20111014	GO:0000719|photoreactive repair GO:0006281|DNA repair GO:0009650|UV protection	GO:0003904|deoxyribodipyrimidine photo-lyase activity GO:0003913|DNA photolyase activity	NA
pt2_00817	A	A1S	Potri.001G116600	Potri.001G116600(AS)	POPTR_0001s08040	NA	NA	AT1G62870.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12380.1); Has 351 Blast hits to 343 proteins in 42 species: Archae - 2; Bacteria - 0; Metazoa - 27; Fungi - 5; Plants - 299; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). | chr1:23284220-23286508 REVERSE LENGTH=762	LOC_Os02g25230.1	protein|expressed protein	NA	NA	NA	NA	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_00818	A	A2S	Potri.001G116500	Potri.001G116500(AS) Potri.003G116000(BS)	POPTR_0001s08050	sp|Q8L7W5|SMO11_ARATH	Methylsterol monooxygenase 1-1 OS=Arabidopsis thaliana GN=SMO1-1 PE=1 SV=1	AT4G12110.1	| Symbols: SMO1-1, ATSMO1, ATSMO1-1 | sterol-4alpha-methyl oxidase 1-1 | chr4:7254197-7256004 FORWARD LENGTH=298	LOC_Os10g39810.1	protein|fatty acid hydroxylase, putative, expressed	IMGA|Medtr5g035190.1	Sterol 4-alpha-methyl-oxidase chr5 14887526-14890800 F EGN_Mt100125 20111014	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0006084|acetyl-CoA metabolic process GO:0006633|fatty acid biosynthetic process GO:0006816|calcium ion transport GO:0007030|Golgi organization GO:0009086|methionine biosynthetic process GO:0009651|response to salt stress GO:0016126|sterol biosynthetic process GO:0016132|brassinosteroid biosynthetic process GO:0046520|sphingoid biosynthetic process GO:0055114|oxidation-reduction process	GO:0000254|C-4 methylsterol oxidase activity GO:0003824|catalytic activity GO:0005506|iron ion binding GO:0016491|oxidoreductase activity GO:0080064|4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha-methyl oxidase activity	GO:0016020|membrane
pt2_00819	A	A1S	Potri.001G116300	Potri.001G116300(AS)	POPTR_0001s08060	sp|P0C8Q5|PP336_ARATH	Pentatricopeptide repeat-containing protein At4g22760 OS=Arabidopsis thaliana GN=PCMP-E6 PE=2 SV=1	AT4G22760.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:11960553-11962289 FORWARD LENGTH=578	LOC_Os08g06490.1	protein|pentatricopeptide, putative, expressed	IMGA|Medtr5g006420.1	Pentatricopeptide repeat-containing protein chr5 674856-677668 E EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005739|mitochondrion
pt2_00820	A	A1S	Potri.001G116200	Potri.001G116200(AS)	POPTR_0001s08070	sp|Q56XJ7|Y4276_ARATH	Uncharacterized protein At4g22758 OS=Arabidopsis thaliana GN=At4g22758 PE=2 SV=1	AT4G22758.1	| Symbols: | unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G27830.1). | chr4:11958477-11959904 FORWARD LENGTH=255	LOC_Os02g25080.1	protein|expressed protein	IMGA|Medtr5g011770.1	hypothetical protein chr5 3187220-3185337 H EGN_Mt100125 20111014	NA	NA	GO:0005634|nucleus
pt2_00821	A	A2S	Potri.001G116100	Potri.001G116100(AS) Potri.003G116400(DS)	POPTR_0001s08080	sp|Q84W04|CNIH4_ARATH	Protein cornichon homolog 4 OS=Arabidopsis thaliana GN=At1g12390 PE=1 SV=1	AT1G12390.1	| Symbols: | Cornichon family protein | chr1:4220347-4221481 FORWARD LENGTH=137	LOC_Os06g04500.1	protein|cornichon protein, putative, expressed	IMGA|Medtr5g011690.1	ER-derived vesicles protein ERV14 chr5 3162982-3160840 F EGN_Mt100125 20111014	GO:0035556|intracellular signal transduction	GO:0005515|protein binding	GO:0016020|membrane
pt2_00822	A	A2S	Potri.001G116000	Potri.001G116000(AS) Potri.009G138800(DS)	POPTR_0001s08090	NA	NA	AT1G12400.1	| Symbols: | Nucleotide excision repair, TFIIH, subunit TTDA | chr1:4222296-4222603 FORWARD LENGTH=71	LOC_Os07g38600.1	protein|REX1 DNA Repair family protein, expressed	IMGA|Medtr5g055890.1	General transcription factor IIH subunit chr5 22473661-22476041 F EGN_Mt100125 20111014	GO:0006289|nucleotide-excision repair	GO:0003677|DNA binding	GO:0005634|nucleus
pt2_00823	A	A1S	Potri.001G115900	Potri.001G115900(AS)	POPTR_0001s08100	sp|Q9XJ36|CLPR2_ARATH	ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic OS=Arabidopsis thaliana GN=CLPR2 PE=1 SV=1	AT1G12410.1	| Symbols: CLPR2, NCLPP2, CLP2 | CLP protease proteolytic subunit 2 | chr1:4223099-4224954 FORWARD LENGTH=279	LOC_Os06g04530.1	protein|OsClp9 - Putative Clp protease homologue, expressed	IMGA|Medtr1g086940.1	ATP-dependent Clp protease proteolytic subunit chr1 23268149-23273759 F EGN_Mt100125 20111014	GO:0006364|rRNA processing GO:0006508|proteolysis GO:0009658|chloroplast organization GO:0009902|chloroplast relocation GO:0010027|thylakoid membrane organization GO:0010207|photosystem II assembly GO:0034660|ncRNA metabolic process GO:0035304|regulation of protein dephosphorylation GO:0042793|transcription from plastid promoter GO:0045893|positive regulation of transcription, DNA-dependent	GO:0004252|serine-type endopeptidase activity	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009570|chloroplast stroma GO:0009840|chloroplastic endopeptidase Clp complex GO:0009941|chloroplast envelope GO:0010287|plastoglobule
pt2_00824	A	A1S	Potri.001G115900	Potri.001G115900(AS)	POPTR_0001s08100	sp|Q9XJ36|CLPR2_ARATH	ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic OS=Arabidopsis thaliana GN=CLPR2 PE=1 SV=1	AT1G12410.1	| Symbols: CLPR2, NCLPP2, CLP2 | CLP protease proteolytic subunit 2 | chr1:4223099-4224954 FORWARD LENGTH=279	LOC_Os06g04530.1	protein|OsClp9 - Putative Clp protease homologue, expressed	IMGA|Medtr1g086940.1	ATP-dependent Clp protease proteolytic subunit chr1 23268149-23273759 F EGN_Mt100125 20111014	GO:0006364|rRNA processing GO:0006508|proteolysis GO:0009658|chloroplast organization GO:0009902|chloroplast relocation GO:0010027|thylakoid membrane organization GO:0010207|photosystem II assembly GO:0034660|ncRNA metabolic process GO:0035304|regulation of protein dephosphorylation GO:0042793|transcription from plastid promoter GO:0045893|positive regulation of transcription, DNA-dependent	GO:0004252|serine-type endopeptidase activity	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009570|chloroplast stroma GO:0009840|chloroplastic endopeptidase Clp complex GO:0009941|chloroplast envelope GO:0010287|plastoglobule
pt2_00825	A	A1S	Potri.001G115800	Potri.001G115800(AS)	POPTR_0001s08110	NA	NA	AT4G12080.1	| Symbols: AHL1, ATAHL1 | AT-hook motif nuclear-localized protein 1 | chr4:7239466-7241246 FORWARD LENGTH=356	LOC_Os08g02490.1	protein|AT hook motif domain containing protein, expressed	IMGA|contig_62590_1.1	AT-hook motif nuclear localized protein contig_62590 587-3109 E PREDN 20111014	GO:0016132|brassinosteroid biosynthetic process	GO:0003677|DNA binding	GO:0005634|nucleus GO:0005730|nucleolus GO:0005737|cytoplasm GO:0005739|mitochondrion
pt2_00826	A	A1S	Potri.001G115600	Potri.001G115600(AS)	POPTR_0001s08130	NA	NA	AT1G12420.1	| Symbols: ACR8 | ACT domain repeat 8 | chr1:4226673-4228917 REVERSE LENGTH=441	LOC_Os03g14370.2	protein|ACT domain containing protein, expressed	IMGA|Medtr5g011580.1	hypothetical protein chr5 3120961-3123634 E EGN_Mt100125 20111014	GO:0008152|metabolic process GO:0009737|response to abscisic acid stimulus	GO:0016597|amino acid binding	GO:0005575|cellular_component
pt2_00827	A	A1S	Potri.001G115500	Potri.001G115500(AS)	POPTR_0001s08140	sp|Q8GW78|CLP41_ARATH	Clp protease-related protein At4g12060, chloroplastic OS=Arabidopsis thaliana GN=At4g12060 PE=1 SV=1	AT4G12060.1	| Symbols: | Double Clp-N motif protein | chr4:7228269-7229898 REVERSE LENGTH=241	LOC_Os03g14280.1	protein|ATP-dependent Clp protease ATP-binding subunit, putative, expressed	IMGA|Medtr5g011550.1	ATP-dependent Clp protease ATP-binding subunit clpA-like protein chr5 3115136-3111956 F EGN_Mt100125 20111014	GO:0006569|tryptophan catabolic process GO:0009684|indoleacetic acid biosynthetic process GO:0019538|protein metabolic process	GO:0005524|ATP binding GO:0043424|protein histidine kinase binding	GO:0009507|chloroplast GO:0009532|plastid stroma GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope
pt2_00828	A	A1S	Potri.001G115500	Potri.001G115500(AS)	POPTR_0001s08140	sp|Q8GW78|CLP41_ARATH	Clp protease-related protein At4g12060, chloroplastic OS=Arabidopsis thaliana GN=At4g12060 PE=1 SV=1	AT4G12060.1	| Symbols: | Double Clp-N motif protein | chr4:7228269-7229898 REVERSE LENGTH=241	LOC_Os03g14280.1	protein|ATP-dependent Clp protease ATP-binding subunit, putative, expressed	IMGA|Medtr5g011550.1	ATP-dependent Clp protease ATP-binding subunit clpA-like protein chr5 3115136-3111956 F EGN_Mt100125 20111014	GO:0006569|tryptophan catabolic process GO:0009684|indoleacetic acid biosynthetic process GO:0019538|protein metabolic process	GO:0005524|ATP binding GO:0043424|protein histidine kinase binding	GO:0009507|chloroplast GO:0009532|plastid stroma GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope
pt2_00829	C	C1S	Potri.001G115500	Potri.001G115500(CS)	sp|Q8GW78|CLP41_ARATH	Clp protease-related protein At4g12060, chloroplastic OS=Arabidopsis thaliana GN=At4g12060 PE=1 SV=1	AT4G12060.1	| Symbols: | Double Clp-N motif protein | chr4:7228269-7229898 REVERSE LENGTH=241	LOC_Os03g14280.1	protein|ATP-dependent Clp protease ATP-binding subunit, putative, expressed	IMGA|Medtr5g011550.1	ATP-dependent Clp protease ATP-binding subunit clpA-like protein chr5 3115136-3111956 F EGN_Mt100125 20111014	GO:0006569|tryptophan catabolic process GO:0009684|indoleacetic acid biosynthetic process GO:0019538|protein metabolic process	GO:0005524|ATP binding GO:0043424|protein histidine kinase binding	GO:0009507|chloroplast GO:0009532|plastid stroma GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope
pt2_00830	A	A1A	Potri.001G115500	Potri.001G115500(AA)	POPTR_0001s08150	sp|Q8GW78|CLP41_ARATH	Clp protease-related protein At4g12060, chloroplastic OS=Arabidopsis thaliana GN=At4g12060 PE=1 SV=1	AT4G12060.1	| Symbols: | Double Clp-N motif protein | chr4:7228269-7229898 REVERSE LENGTH=241	LOC_Os03g14280.1	protein|ATP-dependent Clp protease ATP-binding subunit, putative, expressed	IMGA|Medtr5g011550.1	ATP-dependent Clp protease ATP-binding subunit clpA-like protein chr5 3115136-3111956 F EGN_Mt100125 20111014	GO:0006569|tryptophan catabolic process GO:0009684|indoleacetic acid biosynthetic process GO:0019538|protein metabolic process	GO:0005524|ATP binding GO:0043424|protein histidine kinase binding	GO:0009507|chloroplast GO:0009532|plastid stroma GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope
pt2_00831	A	A1S	Potri.001G115400	Potri.001G115400(AS)	POPTR_0001s08160	sp|Q8RWF5|MATE9_ARATH	MATE efflux family protein 9 OS=Arabidopsis thaliana GN=DTXL5 PE=2 SV=1	AT4G22790.1	| Symbols: | MATE efflux family protein | chr4:11975153-11976628 REVERSE LENGTH=491	LOC_Os03g64150.1	protein|MATE efflux family protein, putative, expressed	IMGA|Medtr5g011540.1	Multidrug and toxin extrusion protein chr5 3109930-3111465 H EGN_Mt100125 20111014	GO:0006855|drug transmembrane transport GO:0055085|transmembrane transport	GO:0005215|transporter activity GO:0015238|drug transmembrane transporter activity GO:0015297|antiporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_00832	A	A1S	Potri.001G115300	Potri.001G115300(AS)	POPTR_0001s08170	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00833	G	G1	NA	NA	POPTR_0001s08180	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00834	B	B1S	Potri.001G115200	Potri.001G115200(BS)	POPTR_0001s08190	sp|Q9S7C9|ESCA_ARATH	Putative DNA-binding protein ESCAROLA OS=Arabidopsis thaliana GN=ESC PE=2 SV=1	AT4G22810.1	| Symbols: | Predicted AT-hook DNA-binding family protein | chr4:11984432-11985406 FORWARD LENGTH=324	LOC_Os02g25020.1	protein|DNA binding protein, putative, expressed	IMGA|contig_74397_1.1	AT-hook motif nuclear localized protein contig_74397 1922-494 F PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_00835	A	A1S	Potri.001G115100	Potri.001G115100(AS)	POPTR_0001s08200	sp|Q9FZ06|ARK3_ARATH	Armadillo repeat-containing kinesin-like protein 3 OS=Arabidopsis thaliana GN=ARK3 PE=1 SV=1	AT1G12430.1	| Symbols: PAK, ARK3 | armadillo repeat kinesin 3 | chr1:4234122-4238552 REVERSE LENGTH=919	LOC_Os06g04560.1	protein|kinesin motor domain containing protein, expressed	IMGA|Medtr5g011500.1	Kinesin-1 chr5 3071430-3079425 H EGN_Mt100125 20111014	GO:0009855|determination of bilateral symmetry GO:0009887|organ morphogenesis GO:0010051|xylem and phloem pattern formation GO:0048439|flower morphogenesis GO:0048519|negative regulation of biological process	GO:0003777|microtubule motor activity GO:0005524|ATP binding	GO:0009574|preprophase band
pt2_00836	A	A1S	Potri.001G115000	Potri.001G115000(AS)	POPTR_0001s08210	sp|Q9SZ69|SAP7_ARATH	Zinc finger A20 and AN1 domain-containing stress-associated protein 7 OS=Arabidopsis thaliana GN=SAP7 PE=1 SV=1	AT4G12040.2	| Symbols: | A20/AN1-like zinc finger family protein | chr4:7215341-7215868 FORWARD LENGTH=175	LOC_Os07g07350.2	protein|zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed	NA	NA	GO:0006944|cellular membrane fusion GO:0008150|biological_process GO:0010200|response to chitin GO:0048193|Golgi vesicle transport	GO:0003677|DNA binding GO:0008270|zinc ion binding	GO:0005634|nucleus GO:0009506|plasmodesma
pt2_00837	A	A1S	Potri.001G114900	Potri.001G114900(AS)	POPTR_0001s08220	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0005515|protein binding	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_00838	A	A1S	Potri.001G114800	Potri.001G114800(AS)	POPTR_0001s08230	sp|Q55720|YC49L_SYNY3	Ycf49-like protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0608 PE=3 SV=1	AT4G22830.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2499 (InterPro:IPR019634); Has 319 Blast hits to 317 proteins in 103 species: Archae - 0; Bacteria - 147; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). | chr4:11990296-11991325 REVERSE LENGTH=193	LOC_Os04g31010.2	protein|expressed protein	IMGA|Medtr5g011460.1	Ycf49-like protein chr5 3045744-3050191 F EGN_Mt100125 20111014	GO:0008150|biological_process GO:0010207|photosystem II assembly	GO:0003674|molecular_function	GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_00839	A	A1S	Potri.001G114700	Potri.001G114700(AS)	POPTR_0001s08240	NA	NA	AT4G22840.1	| Symbols: | Sodium Bile acid symporter family | chr4:11991636-11993676 REVERSE LENGTH=409	LOC_Os09g34900.1	protein|bile acid sodium symporter family protein, putative, expressed	IMGA|Medtr5g011440.1	hypothetical protein chr5 3036649-3040069 E EGN_Mt100125 20111014	GO:0006814|sodium ion transport GO:0035725|sodium ion transmembrane transport	GO:0005215|transporter activity GO:0008508|bile acid:sodium symporter activity	GO:0009941|chloroplast envelope GO:0016020|membrane
pt2_00840	A	A1S	Potri.001G114600	Potri.001G114600(AS)	POPTR_0001s08250	sp|Q55909|Y305_SYNY3	TVP38/TMEM64 family membrane protein slr0305 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr0305 PE=3 SV=1	AT4G22850.1	| Symbols: | SNARE associated Golgi protein family | chr4:11994194-11995941 FORWARD LENGTH=296	LOC_Os07g28440.1	protein|SNARE associated Golgi protein, putative, expressed	IMGA|Medtr5g011420.1	TVP38/TMEM64 family membrane protein slr0305 chr5 3031173-3029607 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005886|plasma membrane
pt2_00841	A	A1S	Potri.001G114500	Potri.001G114500(AS)	POPTR_0001s08260	sp|C0LGE4|Y1124_ARATH	Probable LRR receptor-like serine/threonine-protein kinase At1g12460 OS=Arabidopsis thaliana GN=At1g12460 PE=1 SV=1	AT1G12460.1	| Symbols: | Leucine-rich repeat protein kinase family protein | chr1:4247703-4250444 FORWARD LENGTH=882	LOC_Os03g03570.2	protein|leucine-rich repeat transmembrane protein kinase, putative, expressed	IMGA|Medtr5g011410.1	Protein kinase like protein chr5 3025593-3022609 E EGN_Mt100125 20111014	GO:0002237|response to molecule of bacterial origin GO:0006468|protein phosphorylation GO:0007165|signal transduction GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway GO:0010103|stomatal complex morphogenesis GO:0048443|stamen development	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_00842	A	A1S	Potri.001G114400	Potri.001G114400(AS)	POPTR_0001s08270	NA	NA	AT4G22860.1	| Symbols: | Cell cycle regulated microtubule associated protein | chr4:11997735-12001281 FORWARD LENGTH=509	LOC_Os06g03980.1	protein|expressed protein	NA	NA	GO:0000226|microtubule cytoskeleton organization GO:0006342|chromatin silencing GO:0006346|methylation-dependent chromatin silencing GO:0008150|biological_process GO:0009909|regulation of flower development GO:0016458|gene silencing GO:0031048|chromatin silencing by small RNA GO:0034968|histone lysine methylation GO:0042127|regulation of cell proliferation GO:0051567|histone H3-K9 methylation	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005739|mitochondrion
pt2_00843	C	C1S	Potri.001G114300	Potri.001G114300(CS)	sp|Q9LD83|SLAC1_ARATH	Guard cell S-type anion channel SLAC1 OS=Arabidopsis thaliana GN=SLAC1 PE=1 SV=1	AT1G12480.1	| Symbols: OZS1, SLAC1, RCD3, CDI3 | C4-dicarboxylate transporter/malic acid transport protein | chr1:4257427-4259249 REVERSE LENGTH=556	LOC_Os04g48530.1	protein|C4-dicarboxylate transporter/malic acid transport protein domain containing protein, expressed	NA	NA	GO:0006820|anion transport GO:0006863|purine nucleobase transport GO:0006873|cellular ion homeostasis GO:0009270|response to humidity GO:0009737|response to abscisic acid stimulus GO:0010037|response to carbon dioxide GO:0010193|response to ozone GO:0050891|multicellular organismal water homeostasis GO:0055085|transmembrane transport	GO:0005215|transporter activity GO:0008308|voltage-gated anion channel activity GO:0008509|anion transmembrane transporter activity GO:0019901|protein kinase binding	GO:0005886|plasma membrane GO:0016021|integral to membrane
pt2_00844	A	A3S	Potri.001G114200	Potri.001G114200(AS) Potri.013G030000(DS) Potri.013G030200(DS)	POPTR_0001s08290	NA	NA	AT2G32300.1	| Symbols: UCC1 | uclacyanin 1 | chr2:13722510-13723464 FORWARD LENGTH=261	NA	NA	NA	NA	GO:0048765|root hair cell differentiation GO:0048767|root hair elongation	GO:0005507|copper ion binding GO:0009055|electron carrier activity	GO:0005886|plasma membrane GO:0031225|anchored to membrane
pt2_00845	A	A2S	Potri.001G114100	Potri.001G114100(AS) Potri.003G118000(DS)	POPTR_0001s08300	sp|Q9LDH3|PT112_ARATH	Probable sugar phosphate/phosphate translocator At1g12500 OS=Arabidopsis thaliana GN=At1g12500 PE=2 SV=1	AT1G12500.1	| Symbols: | Nucleotide-sugar transporter family protein | chr1:4263542-4264957 REVERSE LENGTH=361	LOC_Os03g17740.1	protein|transporter, putative, expressed	IMGA|Medtr5g081710.2	Maturase chr5 33996127-34007844 E EGN_Mt100125 20111014	GO:0016049|cell growth GO:0030243|cellulose metabolic process	GO:0008514|organic anion transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_00846	A	A1S	Potri.001G114000	Potri.001G114000(AS)	POPTR_0001s08310	NA	NA	AT4G37740.1	| Symbols: AtGRF2, GRF2 | growth-regulating factor 2 | chr4:17725533-17727609 REVERSE LENGTH=535	LOC_Os02g45570.2	protein|growth regulating factor protein, putative, expressed	IMGA|Medtr5g027030.1	hypothetical protein chr5 10949245-10952049 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009737|response to abscisic acid stimulus GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009965|leaf morphogenesis GO:0010114|response to red light GO:0010162|seed dormancy process GO:0010218|response to far red light GO:0048366|leaf development GO:0080167|response to karrikin	GO:0005524|ATP binding GO:0016818|hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	GO:0005634|nucleus
pt2_00847	A	A1S	Potri.001G113900	Potri.001G113900(AS)	POPTR_0001s08320	sp|O23976|C76B1_HELTU	7-ethoxycoumarin O-deethylase OS=Helianthus tuberosus GN=CYP76B1 PE=1 SV=1	AT2G45550.1	| Symbols: CYP76C4 | cytochrome P450, family 76, subfamily C, polypeptide 4 | chr2:18773541-18775654 REVERSE LENGTH=511	LOC_Os03g14400.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g007460.1	Cytochrome P450 monooxygenase chr5 1131766-1133659 E EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	NA
pt2_00848	A	A2S	Potri.001G113800	Potri.001G113800(AS) Potri.003G118400(DS)	POPTR_0001s08330	sp|Q9JK72|CCS_RAT	Copper chaperone for superoxide dismutase OS=Rattus norvegicus GN=Ccs PE=1 SV=1	AT1G12520.1	| Symbols: ATCCS, CCS | copper chaperone for SOD1 | chr1:4267277-4268900 REVERSE LENGTH=320	LOC_Os04g48410.1	protein|copper chaperone for superoxide dismutase, putative, expressed	NA	NA	GO:0006801|superoxide metabolic process GO:0006878|cellular copper ion homeostasis GO:0015680|intracellular copper ion transport GO:0019430|removal of superoxide radicals GO:0030001|metal ion transport GO:0055114|oxidation-reduction process	GO:0008270|zinc ion binding GO:0016532|superoxide dismutase copper chaperone activity GO:0046872|metal ion binding	GO:0005622|intracellular GO:0005737|cytoplasm GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_00849	A	A1S	Potri.001G113700	Potri.001G113700(AS)	POPTR_0001s08340	sp|O64495|SDD1_ARATH	Subtilisin-like protease SDD1 OS=Arabidopsis thaliana GN=SDD1 PE=2 SV=1	AT1G04110.1	| Symbols: SDD1 | Subtilase family protein | chr1:1061457-1063784 REVERSE LENGTH=775	LOC_Os04g47160.1	protein|OsSub44 - Putative Subtilisin homologue, expressed	IMGA|Medtr5g011280.1	Subtilisin-like serine protease chr5 2974277-2972016 H EGN_Mt100125 20111014	GO:0006508|proteolysis GO:0008152|metabolic process GO:0010103|stomatal complex morphogenesis GO:0042127|regulation of cell proliferation GO:0043086|negative regulation of catalytic activity	GO:0004252|serine-type endopeptidase activity GO:0042802|identical protein binding	GO:0005576|extracellular region GO:0005618|cell wall GO:0009897|external side of plasma membrane
pt2_00850	A	A1S	Potri.001G113600	Potri.001G113600(AS)	POPTR_0001s08350	NA	NA	AT3G58630.1	| Symbols: | sequence-specific DNA binding transcription factors | chr3:21683928-21685771 REVERSE LENGTH=321	LOC_Os05g48690.1	protein|transcription factor like protein, putative, expressed	IMGA|contig_83346_1.1	Transcription regulation protein contig_83346 3217-606 E PREDN 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009793|embryo development ending in seed dormancy GO:0010431|seed maturation GO:0043687|post-translational protein modification GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00851	A	A1S	Potri.001G113600	Potri.001G113600(AS)	POPTR_0001s08360	NA	NA	AT3G58630.1	| Symbols: | sequence-specific DNA binding transcription factors | chr3:21683928-21685771 REVERSE LENGTH=321	LOC_Os05g48690.1	protein|transcription factor like protein, putative, expressed	IMGA|contig_83346_1.1	Transcription regulation protein contig_83346 3217-606 E PREDN 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009793|embryo development ending in seed dormancy GO:0010431|seed maturation GO:0043687|post-translational protein modification GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00852	A	A1S	Potri.001G113500	Potri.001G113500(AS)	POPTR_0001s08370	sp|Q0DA50|C3H45_ORYSJ	Zinc finger CCCH domain-containing protein 45 OS=Oryza sativa subsp. japonica GN=Os06g0677700 PE=2 SV=1	AT4G11970.2	| Symbols: | YTH family protein | chr4:7181223-7183265 FORWARD LENGTH=359	LOC_Os06g46400.1	protein|ATCPSF30/CPSF30, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00853	A	A1S	Potri.001G113400	Potri.001G113400(AS)	POPTR_0001s08380	sp|Q9STJ6|BH126_ARATH	Transcription factor bHLH126 OS=Arabidopsis thaliana GN=BHLH126 PE=2 SV=1	AT4G25410.1	| Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr4:12985772-12987149 FORWARD LENGTH=230	NA	NA	IMGA|contig_60385_1.1	BHLH transcription factor-like protein contig_60385 484-1612 E PREDN 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00854	A	A1S	Potri.001G113300	Potri.001G113300(AS)	POPTR_0001s08390	NA	NA	AT2G45630.1	| Symbols: | D-isomer specific 2-hydroxyacid dehydrogenase family protein | chr2:18796000-18796560 FORWARD LENGTH=186	LOC_Os04g01674.1	protein|erythronate-4-phosphate dehydrogenase domain containing protein, expressed	NA	NA	GO:0008152|metabolic process GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0048037|cofactor binding GO:0051287|NAD binding	GO:0005737|cytoplasm
pt2_00855	A	A1S	Potri.001G113200	Potri.001G113200(AS)	POPTR_0001s08400	sp|B6YWH0|GYAR_THEON	Glyoxylate reductase OS=Thermococcus onnurineus (strain NA1) GN=gyaR PE=3 SV=1	AT1G12550.1	| Symbols: | D-isomer specific 2-hydroxyacid dehydrogenase family protein | chr1:4274649-4275831 FORWARD LENGTH=323	LOC_Os04g01674.1	protein|erythronate-4-phosphate dehydrogenase domain containing protein, expressed	NA	NA	GO:0009853|photorespiration GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity GO:0016618|hydroxypyruvate reductase activity GO:0030267|glyoxylate reductase (NADP) activity	GO:0005737|cytoplasm
pt2_00856	A	A1S	Potri.001G113100	Potri.001G113100(AS)	POPTR_0001s08410	sp|P51091|LDOX_MALDO	Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1	AT4G22880.2	| Symbols: LDOX, TDS4, TT18, ANS | leucoanthocyanidin dioxygenase | chr4:12004905-12006059 REVERSE LENGTH=356	LOC_Os01g27490.1	protein|leucoanthocyanidin dioxygenase, putative, expressed	IMGA|Medtr5g011250.1	Leucoanthocyanidin dioxygenase chr5 2953672-2956171 E EGN_Mt100125 20111014	GO:0007033|vacuole organization GO:0009611|response to wounding GO:0009718|anthocyanin-containing compound biosynthetic process GO:0009753|response to jasmonic acid stimulus GO:0010023|proanthocyanidin biosynthetic process GO:0055114|oxidation-reduction process	GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors GO:0050589|leucocyanidin oxygenase activity	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_00857	A	A1S	Potri.001G113000	Potri.001G113000(AS)	POPTR_0001s08420	sp|Q8H112|PGL1A_ARATH	PGR5-like protein 1A, chloroplastic OS=Arabidopsis thaliana GN=PGRL1A PE=1 SV=1	AT4G22890.5	| Symbols: PGR5-LIKE A | PGR5-LIKE A | chr4:12007157-12009175 FORWARD LENGTH=322	LOC_Os08g41460.2	protein|expressed protein	IMGA|Medtr5g011220.1	PGR5-like protein 1A chr5 2946108-2943524 E EGN_Mt100125 20111014	GO:0000023|maltose metabolic process GO:0006098|pentose-phosphate shunt GO:0006364|rRNA processing GO:0009637|response to blue light GO:0009657|plastid organization GO:0009773|photosynthetic electron transport in photosystem I GO:0009902|chloroplast relocation GO:0010027|thylakoid membrane organization GO:0010114|response to red light GO:0010207|photosystem II assembly GO:0010218|response to far red light GO:0010304|PSII associated light-harvesting complex II catabolic process GO:0015979|photosynthesis GO:0019252|starch biosynthetic process GO:0019684|photosynthesis, light reaction GO:0034660|ncRNA metabolic process GO:0035304|regulation of protein dephosphorylation GO:0042742|defense response to bacterium GO:0043085|positive regulation of catalytic activity	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009579|thylakoid
pt2_00858	A	A1S	Potri.001G112900	Potri.001G112900(AS)	POPTR_0001s08430	sp|Q9LN94|EXPA7_ARATH	Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 SV=1	AT1G12560.1	| Symbols: ATEXPA7, EXP7, ATEXP7, ATHEXP ALPHA 1.26, EXPA7 | expansin A7 | chr1:4276557-4277693 FORWARD LENGTH=262	LOC_Os10g39110.1	protein|expansin precursor, putative, expressed	IMGA|Medtr5g011210.1	Expansin-A7 chr5 2941626-2940011 F EGN_Mt100125 20111014	GO:0009664|plant-type cell wall organization GO:0009826|unidimensional cell growth GO:0009828|plant-type cell wall loosening GO:0009831|plant-type cell wall modification involved in multidimensional cell growth GO:0010054|trichoblast differentiation GO:0048446|petal morphogenesis GO:0048765|root hair cell differentiation GO:0048767|root hair elongation	NA	GO:0005576|extracellular region
pt2_00859	R	R	NA	NA	POPTR_0001s08440	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00860	C	C1S	Potri.001G112700	Potri.001G112700(CS)	sp|Q8L3Z8|FZR2_ARATH	Protein FIZZY-RELATED 2 OS=Arabidopsis thaliana GN=FZR2 PE=1 SV=1	AT4G22910.1	| Symbols: FZR2, CCS52A1 | FIZZY-related 2 | chr4:12012743-12015663 FORWARD LENGTH=483	LOC_Os03g03150.1	protein|WD repeat-containing protein, putative, expressed	IMGA|Medtr5g008010.1	Cell division cycle protein-like protein chr5 1393945-1396270 E EGN_Mt100125 20111014	GO:0007165|signal transduction GO:0007276|gamete generation GO:0010091|trichome branching GO:0016049|cell growth GO:0032875|regulation of DNA endoreduplication GO:0042023|DNA endoreduplication GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0043248|proteasome assembly GO:0051302|regulation of cell division GO:0051510|regulation of unidimensional cell growth GO:0051788|response to misfolded protein	GO:0004871|signal transducer activity GO:0005515|protein binding	GO:0005634|nucleus GO:0005834|heterotrimeric G-protein complex
pt2_00861	A	A1S	Potri.001G112700	Potri.001G112700(AS)	POPTR_0001s08460	sp|Q8L3Z8|FZR2_ARATH	Protein FIZZY-RELATED 2 OS=Arabidopsis thaliana GN=FZR2 PE=1 SV=1	AT4G22910.1	| Symbols: FZR2, CCS52A1 | FIZZY-related 2 | chr4:12012743-12015663 FORWARD LENGTH=483	LOC_Os03g03150.1	protein|WD repeat-containing protein, putative, expressed	IMGA|Medtr5g008010.1	Cell division cycle protein-like protein chr5 1393945-1396270 E EGN_Mt100125 20111014	GO:0007165|signal transduction GO:0007276|gamete generation GO:0010091|trichome branching GO:0016049|cell growth GO:0032875|regulation of DNA endoreduplication GO:0042023|DNA endoreduplication GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0043248|proteasome assembly GO:0051302|regulation of cell division GO:0051510|regulation of unidimensional cell growth GO:0051788|response to misfolded protein	GO:0004871|signal transducer activity GO:0005515|protein binding	GO:0005634|nucleus GO:0005834|heterotrimeric G-protein complex
pt2_00862	A	A1S	Potri.001G112600	Potri.001G112600(AS)	POPTR_0001s08470	NA	NA	AT4G22920.1	| Symbols: ATNYE1, NYE1 | non-yellowing 1 | chr4:12016776-12017969 REVERSE LENGTH=268	LOC_Os09g36200.1	protein|senescence-inducible chloroplast stay-green protein 1, putative, expressed	IMGA|Medtr5g011120.1	Senescence-inducible chloroplast stay-green protein chr5 2919163-2920896 F EGN_Mt100125 20111014	GO:0015996|chlorophyll catabolic process	GO:0005515|protein binding	NA
pt2_00863	A	A1S	Potri.001G112500	Potri.001G112500(AS)	POPTR_0001s08480	NA	NA	NA	NA	NA	NA	NA	NA	GO:0015996|chlorophyll catabolic process	GO:0005515|protein binding	NA
pt2_00864	C	C1S	Potri.001G112400	Potri.001G112400(CS)	sp|O82743|AGL19_ARATH	Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana GN=AGL19 PE=1 SV=1	AT4G22950.1	| Symbols: AGL19, GL19 | AGAMOUS-like 19 | chr4:12023946-12027421 REVERSE LENGTH=219	LOC_Os10g39130.1	protein|OsMADS56 - MADS-box family gene with MIKCc type-box, expressed	IMGA|Medtr5g031000.1	MADS-box protein chr5 12873379-12860456 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0010048|vernalization response GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0048440|carpel development GO:0048510|regulation of timing of transition from vegetative to reproductive phase	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_00865	C	C1S	Potri.001G112400	Potri.001G112400(CS)	sp|O82743|AGL19_ARATH	Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana GN=AGL19 PE=1 SV=1	AT4G22950.1	| Symbols: AGL19, GL19 | AGAMOUS-like 19 | chr4:12023946-12027421 REVERSE LENGTH=219	LOC_Os10g39130.1	protein|OsMADS56 - MADS-box family gene with MIKCc type-box, expressed	IMGA|Medtr5g031000.1	MADS-box protein chr5 12873379-12860456 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0010048|vernalization response GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0048440|carpel development GO:0048510|regulation of timing of transition from vegetative to reproductive phase	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_00866	A	A1S	Potri.001G112300	Potri.001G112300(AS)	POPTR_0001s08530	sp|Q76LS9|FA63A_MOUSE	Protein FAM63A OS=Mus musculus GN=Fam63a PE=1 SV=1	AT4G11860.1	| Symbols: | Protein of unknown function (DUF544) | chr4:7134237-7138361 REVERSE LENGTH=682	LOC_Os06g49800.1	protein|ubiquitin interaction motif family protein, expressed	IMGA|Medtr5g011090.1	Protein FAM63A chr5 2904887-2898720 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane
pt2_00867	A	A1S	Potri.001G112200	Potri.001G112200(AS)	POPTR_0001s08550	sp|P46606|HD1_BRANA	Homeobox protein HD1 OS=Brassica napus GN=HD1 PE=2 SV=1	AT1G62990.1	| Symbols: KNAT7, IXR11 | KNOTTED-like homeobox of Arabidopsis thaliana 7 | chr1:23337468-23340348 FORWARD LENGTH=291	LOC_Os03g03164.1	protein|homeobox protein knotted-1, putative, expressed	IMGA|Medtr5g011070.2	Homeobox protein knotted-1-like protein chr5 2885827-2882032 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0007155|cell adhesion GO:0010089|xylem development GO:0010090|trichome morphogenesis GO:0010413|glucuronoxylan metabolic process GO:0044036|cell wall macromolecule metabolic process GO:0045010|actin nucleation GO:0045492|xylan biosynthetic process GO:0045892|negative regulation of transcription, DNA-dependent GO:0048513|organ development GO:0048765|root hair cell differentiation GO:0071555|cell wall organization GO:2000652|regulation of secondary cell wall biogenesis	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_00868	A	A1S	Potri.001G112100	Potri.001G112100(AS)	POPTR_0001s08560	sp|P93733|PLDB1_ARATH	Phospholipase D beta 1 OS=Arabidopsis thaliana GN=PLDBETA1 PE=2 SV=4	AT2G42010.1	| Symbols: PLDBETA1, PLDBETA | phospholipase D beta 1 | chr2:17533018-17537990 REVERSE LENGTH=1083	LOC_Os10g38060.2	protein|phospholipase D, putative, expressed	IMGA|Medtr5g011050.1	Phospholipase D chr5 2872473-2867595 E EGN_Mt100125 20111014	GO:0006643|membrane lipid metabolic process GO:0006979|response to oxidative stress GO:0008152|metabolic process GO:0009793|embryo development ending in seed dormancy GO:0009816|defense response to bacterium, incompatible interaction GO:0010044|response to aluminum ion GO:0046470|phosphatidylcholine metabolic process GO:0046686|response to cadmium ion	GO:0003824|catalytic activity GO:0004630|phospholipase D activity GO:0005509|calcium ion binding GO:0005515|protein binding GO:0005546|phosphatidylinositol-4,5-bisphosphate binding	GO:0005634|nucleus GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane
pt2_00869	A	A1S	Potri.001G112000	Potri.001G112000(AS)	POPTR_0001s08570	sp|Q9SYM5|RHM1_ARATH	Probable rhamnose biosynthetic enzyme 1 OS=Arabidopsis thaliana GN=RHM1 PE=1 SV=1	AT1G63000.1	| Symbols: NRS/ER, UER1 | nucleotide-rhamnose synthase/epimerase-reductase | chr1:23342510-23343859 FORWARD LENGTH=301	LOC_Os02g45540.1	protein|synthase, putative, expressed	IMGA|contig_164943_1.1	Dtdp-glucose 4 6-dehydratase contig_164943 3364-208 F PREDN 20111014	GO:0010253|UDP-rhamnose biosynthetic process GO:0019305|dTDP-rhamnose biosynthetic process GO:0045226|extracellular polysaccharide biosynthetic process	GO:0000166|nucleotide binding GO:0008830|dTDP-4-dehydrorhamnose 3,5-epimerase activity GO:0008831|dTDP-4-dehydrorhamnose reductase activity GO:0010489|UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity GO:0010490|UDP-4-keto-rhamnose-4-keto-reductase activity	GO:0005829|cytosol GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0048046|apoplast
pt2_00870	C	C1S	Potri.001G111900	Potri.001G111900(CS)	sp|Q39547|CUCM1_CUCME	Cucumisin OS=Cucumis melo PE=1 SV=1	AT5G59090.2	| Symbols: ATSBT4.12, SBT4.12 | subtilase 4.12 | chr5:23852125-23855235 REVERSE LENGTH=731	LOC_Os06g41880.1	protein|OsSub51 - Putative Subtilisin homologue, expressed	IMGA|Medtr1g006990.1	Subtilisin-like serine protease chr1 711936-709294 H EGN_Mt100125 20111014	GO:0000041|transition metal ion transport GO:0006508|proteolysis GO:0006826|iron ion transport GO:0008152|metabolic process GO:0010106|cellular response to iron ion starvation GO:0010167|response to nitrate GO:0015706|nitrate transport GO:0016132|brassinosteroid biosynthetic process GO:0043086|negative regulation of catalytic activity	GO:0004252|serine-type endopeptidase activity GO:0042802|identical protein binding	GO:0005576|extracellular region GO:0005618|cell wall GO:0005634|nucleus GO:0005737|cytoplasm GO:0048046|apoplast
pt2_00871	A	A1S	Potri.001G111800	Potri.001G111800(AS)	POPTR_0001s08590	sp|O64647|TCP9_ARATH	Transcription factor TCP9 OS=Arabidopsis thaliana GN=TCP9 PE=2 SV=1	AT2G45680.1	| Symbols: | TCP family transcription factor | chr2:18820717-18821787 REVERSE LENGTH=356	LOC_Os08g43160.1	protein|TCP family transcription factor, putative, expressed	IMGA|Medtr1g101810.1	TCP family transcription factor chr1 30139632-30141131 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0031347|regulation of defense response	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00872	A	A1S	Potri.001G111700	Potri.001G111700(AS)	POPTR_0001s08600	sp|P54873|HMCS_ARATH	Hydroxymethylglutaryl-CoA synthase OS=Arabidopsis thaliana GN=HMGS PE=1 SV=2	AT4G11820.2	| Symbols: MVA1, FKP1 | hydroxymethylglutaryl-CoA synthase / HMG-CoA synthase / 3-hydroxy-3-methylglutaryl coenzyme A synthase | chr4:7109124-7111901 REVERSE LENGTH=461	LOC_Os08g43170.1	protein|hydroxymethylglutaryl-CoA synthase, putative, expressed	IMGA|Medtr5g011040.1	Hydroxymethylglutaryl-CoA synthase chr5 2861248-2865277 F EGN_Mt100125 20111014	GO:0006084|acetyl-CoA metabolic process GO:0008152|metabolic process GO:0008299|isoprenoid biosynthetic process GO:0019287|isopentenyl diphosphate biosynthetic process, mevalonate pathway	GO:0003824|catalytic activity GO:0004421|hydroxymethylglutaryl-CoA synthase activity	GO:0005739|mitochondrion GO:0005829|cytosol GO:0009506|plasmodesma
pt2_00873	A	A1S	Potri.001G111600	Potri.001G111600(AS)	POPTR_0001s08610	sp|Q8LGM7|MOCOS_SOLLC	Molybdenum cofactor sulfurase OS=Solanum lycopersicum GN=FLACCA PE=2 SV=1	AT5G51920.1	| Symbols: | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein | chr5:21097202-21098914 REVERSE LENGTH=570	LOC_Os08g43180.1	protein|expressed protein	IMGA|contig_52808_1.1	Molybdenum cofactor sulfurase contig_52808 4120-1183 E PREDN 20111014	GO:0008152|metabolic process	GO:0003824|catalytic activity GO:0030170|pyridoxal phosphate binding	NA
pt2_00874	A	A1S	Potri.001G111500	Potri.001G111500(AS)	POPTR_0001s08620	sp|Q9S746|HTH_ARATH	Protein HOTHEAD OS=Arabidopsis thaliana GN=HTH PE=1 SV=1	AT1G12570.1	| Symbols: | Glucose-methanol-choline (GMC) oxidoreductase family protein | chr1:4278192-4280753 REVERSE LENGTH=572	LOC_Os04g48400.1	protein|HOTHEAD precursor, putative, expressed	IMGA|Medtr5g011020.1	Choline dehydrogenase chr5 2846622-2851422 H EGN_Mt100125 20111014	GO:0006066|alcohol metabolic process GO:0055114|oxidation-reduction process	GO:0008812|choline dehydrogenase activity GO:0016614|oxidoreductase activity, acting on CH-OH group of donors GO:0016832|aldehyde-lyase activity GO:0050660|flavin adenine dinucleotide binding	GO:0005576|extracellular region
pt2_00875	B	B1S	Potri.001G111400	Potri.001G111400(BS)	POPTR_0001s08640	sp|Q93ZQ5|SPXM3_ARATH	SPX domain-containing membrane protein At4g22990 OS=Arabidopsis thaliana GN=At4g22990 PE=2 SV=2	AT4G22990.1	| Symbols: | Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein | chr4:12048240-12050984 REVERSE LENGTH=699	LOC_Os06g03860.1	protein|uncharacterized membrane protein, putative, expressed	IMGA|Medtr1g099580.1	"Membrane protein, putative" chr1 28924721-28920622 H EGN_Mt100125 20111014	GO:0055085|transmembrane transport	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005794|Golgi apparatus GO:0016021|integral to membrane
pt2_00876	B	B1S	Potri.001G111300	Potri.001G111300(BS)	POPTR_0001s08650	sp|Q9LQ02|NRPD1_ARATH	DNA-directed RNA polymerase D subunit 1 OS=Arabidopsis thaliana GN=NRPD1 PE=1 SV=1	AT1G63020.2	| Symbols: NRPD1A | nuclear RNA polymerase D1A | chr1:23355329-23361126 REVERSE LENGTH=1453	LOC_Os04g48370.1	protein|RNA polymerase IV subunit, putative, expressed	IMGA|Medtr5g011000.1	DNA-directed RNA polymerase subunit beta chr5 2818055-2831436 E EGN_Mt100125 20111014	GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0006346|methylation-dependent chromatin silencing GO:0006351|transcription, DNA-dependent GO:0006354|DNA-dependent transcription, elongation GO:0007267|cell-cell signaling GO:0009616|virus induced gene silencing GO:0010267|production of ta-siRNAs involved in RNA interference GO:0010495|long-distance posttranscriptional gene silencing GO:0016246|RNA interference GO:0016569|covalent chromatin modification GO:0030422|production of siRNA involved in RNA interference GO:0031047|gene silencing by RNA GO:0031048|chromatin silencing by small RNA GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0051567|histone H3-K9 methylation	GO:0003677|DNA binding GO:0003899|DNA-directed RNA polymerase activity GO:0005515|protein binding	GO:0000418|DNA-directed RNA polymerase IV complex GO:0005634|nucleus
pt2_00877	C	C1S	Potri.001G111200	Potri.001G111200(CS)	NA	NA	NA	NA	NA	NA	IMGA|Medtr1g056620.1	Calcium-dependent protein kinase chr1 14891325-14894046 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0046777|protein autophosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00878	A	A1S	Potri.001G111100	Potri.001G111100(AS)	POPTR_0001s08680	NA	NA	AT4G11790.1	| Symbols: | Pleckstrin homology (PH) domain superfamily protein | chr4:7090456-7093208 FORWARD LENGTH=443	LOC_Os03g46480.2	protein|ranBP1 domain containing protein, expressed	IMGA|Medtr5g010950.2	RanBP1 domain-containing protein chr5 2799196-2805406 F EGN_Mt100125 20111014	GO:0046907|intracellular transport	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00879	A	A1S	Potri.001G111000	Potri.001G111000(AS)	POPTR_0001s08690	sp|Q29Q28|UTR2_ARATH	UDP-galactose/UDP-glucose transporter 2 OS=Arabidopsis thaliana GN=UTR2 PE=2 SV=1	AT4G23010.2	| Symbols: ATUTR2, UTR2 | UDP-galactose transporter 2 | chr4:12060318-12062486 REVERSE LENGTH=362	LOC_Os03g02670.2	protein|transporter family protein, putative, expressed	NA	NA	GO:0055085|transmembrane transport GO:0072334|UDP-galactose transmembrane transport	GO:0003674|molecular_function GO:0005459|UDP-galactose transmembrane transporter activity	GO:0005886|plasma membrane GO:0030173|integral to Golgi membrane
pt2_00880	A	A1S	Potri.001G111000	Potri.001G111000(AS)	POPTR_0001s08690	sp|Q29Q28|UTR2_ARATH	UDP-galactose/UDP-glucose transporter 2 OS=Arabidopsis thaliana GN=UTR2 PE=2 SV=1	AT4G23010.2	| Symbols: ATUTR2, UTR2 | UDP-galactose transporter 2 | chr4:12060318-12062486 REVERSE LENGTH=362	LOC_Os03g02670.2	protein|transporter family protein, putative, expressed	NA	NA	GO:0055085|transmembrane transport GO:0072334|UDP-galactose transmembrane transport	GO:0003674|molecular_function GO:0005459|UDP-galactose transmembrane transporter activity	GO:0005886|plasma membrane GO:0030173|integral to Golgi membrane
pt2_00881	A	A1S	Potri.001G110900	Potri.001G110900(AS)	POPTR_0001s08700	NA	NA	AT4G23020.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11780.1). | chr4:12066331-12068442 REVERSE LENGTH=452	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_00882	A	A1S	Potri.001G110800	Potri.001G110800(AS)	POPTR_0001s08710	sp|Q9SYS6|DRE1C_ARATH	Dehydration-responsive element-binding protein 1C OS=Arabidopsis thaliana GN=DREB1C PE=2 SV=2	AT4G25470.1	| Symbols: CBF2, DREB1C, FTQ4, ATCBF2 | C-repeat/DRE binding factor 2 | chr4:13015436-13016086 REVERSE LENGTH=216	LOC_Os01g73770.1	protein|dehydration-responsive element-binding protein, putative, expressed	IMGA|Medtr1g101600.1	Dehydration-responsive element binding protein chr1 30062554-30063162 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009409|response to cold GO:0009631|cold acclimation	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00883	A	A1S	Potri.001G110700	Potri.001G110700(AS)	POPTR_0001s08720	sp|Q9FJ93|DRE1D_ARATH	Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana GN=DREB1D PE=2 SV=1	AT5G51990.1	| Symbols: CBF4, DREB1D | C-repeat-binding factor 4 | chr5:21117113-21117787 REVERSE LENGTH=224	LOC_Os04g48350.1	protein|dehydration-responsive element-binding protein, putative, expressed	IMGA|Medtr5g010930.1	Dehydration-responsive element-binding protein 1F chr5 2787016-2787696 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00884	A	A2S	Potri.001G110600	Potri.001G110600(AS) Potri.011G015200(BS)	POPTR_0001s08730	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00885	A	A2S	Potri.001G110500	Potri.001G110500(AS) Potri.003G121200(DS)	POPTR_0001s08740	sp|Q9CAN9|ERF26_ARATH	Ethylene-responsive transcription factor ERF026 OS=Arabidopsis thaliana GN=ERF026 PE=2 SV=1	AT5G52020.1	| Symbols: | Integrase-type DNA-binding superfamily protein | chr5:21124192-21124890 REVERSE LENGTH=232	LOC_Os02g45420.1	protein|AP2 domain containing protein, expressed	IMGA|Medtr1g101550.1	Ethylene-responsive transcription factor ERF026 chr1 30043510-30044157 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0045893|positive regulation of transcription, DNA-dependent GO:0050832|defense response to fungus	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00886	A	A1S	Potri.001G110400	Potri.001G110400(AS)	POPTR_0001s08750	sp|P23586|STP1_ARATH	Sugar transport protein 1 OS=Arabidopsis thaliana GN=STP1 PE=1 SV=2	AT1G11260.1	| Symbols: STP1, ATSTP1 | sugar transporter 1 | chr1:3777460-3780133 FORWARD LENGTH=522	LOC_Os07g01560.1	protein|transporter family protein, putative, expressed	IMGA|Medtr5g041550.1	Hexose transporter chr5 17820383-17818182 H EGN_Mt100125 20111014	GO:0009627|systemic acquired resistance GO:0015749|monosaccharide transport GO:0031347|regulation of defense response	GO:0005351|sugar:hydrogen symporter activity GO:0015144|carbohydrate transmembrane transporter activity GO:0015145|monosaccharide transmembrane transporter activity	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005773|vacuole GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane
pt2_00887	A	A1S	Potri.001G110300	Potri.001G110300(AS)	POPTR_0001s08760	sp|Q0WUQ1|BAG1_ARATH	BAG family molecular chaperone regulator 1 OS=Arabidopsis thaliana GN=BAG1 PE=1 SV=1	AT5G52060.1	| Symbols: ATBAG1, BAG1 | BCL-2-associated athanogene 1 | chr5:21152449-21153741 REVERSE LENGTH=342	LOC_Os09g35630.1	protein|BAG domain-containing protein, putative, expressed	IMGA|contig_48397_1.1	Protein binding protein contig_48397 106-3094 F PREDN 20111014	GO:0006833|water transport GO:0009651|response to salt stress GO:0009750|response to fructose stimulus GO:0030003|cellular cation homeostasis GO:0048767|root hair elongation GO:0070838|divalent metal ion transport	GO:0051087|chaperone binding	GO:0005739|mitochondrion
pt2_00888	A	A2S	Potri.001G110200	Potri.001G110200(AS) Potri.003G121600(DS)	POPTR_0001s08770	sp|P46280|EFTU2_SOYBN	Elongation factor Tu, chloroplastic OS=Glycine max GN=TUFB1 PE=3 SV=1	AT4G20360.1	| Symbols: ATRAB8D, ATRABE1B, RABE1b | RAB GTPase homolog E1B | chr4:10990036-10991466 FORWARD LENGTH=476	LOC_Os02g38210.1	protein|elongation factor Tu, putative, expressed	IMGA|Medtr1g013680.1	Elongation factor 1-alpha chr1 3477744-3479259 E EGN_Mt100125 20111014	GO:0000038|very long-chain fatty acid metabolic process GO:0006414|translational elongation GO:0018119|peptidyl-cysteine S-nitrosylation GO:0042335|cuticle development	GO:0003746|translation elongation factor activity GO:0003924|GTPase activity GO:0005515|protein binding GO:0005525|GTP binding	GO:0005622|intracellular GO:0005634|nucleus GO:0005730|nucleolus GO:0009295|nucleoid GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009536|plastid GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope GO:0016020|membrane GO:0048046|apoplast
pt2_00889	A	A2S	Potri.001G110100	Potri.001G110100(AS) Potri.003G121700(DS)	POPTR_0001s08780	sp|O42916|ALE1_SCHPO	Lysophospholipid acyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ale1 PE=1 SV=1	AT1G12640.1	| Symbols: | MBOAT (membrane bound O-acyl transferase) family protein | chr1:4303586-4305666 REVERSE LENGTH=462	LOC_Os02g45344.1	protein|O-acyltransferase, putative, expressed	NA	NA	GO:0006891|intra-Golgi vesicle-mediated transport GO:0006914|autophagy GO:0009610|response to symbiotic fungus GO:0010260|organ senescence GO:0016036|cellular response to phosphate starvation GO:0019375|galactolipid biosynthetic process GO:0019432|triglyceride biosynthetic process GO:0042631|cellular response to water deprivation	GO:0016746|transferase activity, transferring acyl groups GO:0071617|lysophospholipid acyltransferase activity	GO:0005576|extracellular region GO:0005783|endoplasmic reticulum GO:0005886|plasma membrane GO:0016020|membrane
pt2_00890	A	A1S	Potri.001G110000	Potri.001G110000(AS)	POPTR_0001s08790	sp|Q3UFY0|RRP36_MOUSE	Ribosomal RNA processing protein 36 homolog OS=Mus musculus GN=Rrp36 PE=2 SV=1	AT1G12650.4	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF947 (InterPro:IPR009292); Has 700 Blast hits to 631 proteins in 192 species: Archae - 0; Bacteria - 32; Metazoa - 138; Fungi - 168; Plants - 60; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink). | chr1:4306183-4307673 FORWARD LENGTH=248	LOC_Os09g35670.1	protein|expressed protein	IMGA|Medtr5g058150.1	hypothetical protein chr5 23362980-23368679 F EGN_Mt100125 20111014	GO:0000398|mRNA splicing, via spliceosome GO:0008150|biological_process GO:0051604|protein maturation	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00891	A	A1S	Potri.001G109900	Potri.001G109900(AS)	POPTR_0001s08800	NA	NA	NA	NA	NA	NA	NA	NA	GO:0009790|embryo development GO:0048467|gynoecium development GO:0048481|ovule development	NA	GO:0005634|nucleus
pt2_00892	A	A1S	Potri.001G109800	Potri.001G109800(AS)	POPTR_0001s08810	sp|Q9LN77|P2A12_ARATH	F-box protein PP2-A12 OS=Arabidopsis thaliana GN=P2A12 PE=2 SV=1	AT1G12710.1	| Symbols: AtPP2-A12, PP2-A12 | phloem protein 2-A12 | chr1:4326980-4328324 REVERSE LENGTH=291	LOC_Os03g02550.1	protein|OsFBX76 - F-box domain containing protein, expressed	IMGA|Medtr5g010800.1	F-box family protein chr5 2729633-2732548 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0030246|carbohydrate binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00893	A	A1S	Potri.001G109700	Potri.001G109700(AS)	POPTR_0001s08820	NA	NA	NA	NA	NA	NA	NA	NA	GO:0043086|negative regulation of catalytic activity GO:0080167|response to karrikin	GO:0004857|enzyme inhibitor activity GO:0030599|pectinesterase activity GO:0046910|pectinesterase inhibitor activity	GO:0005576|extracellular region
pt2_00894	A	A2S	Potri.001G109600	Potri.001G109600(AS) Potri.003G122100(BS)	POPTR_0001s08830	NA	NA	AT4G26965.1	| Symbols: | NADH:ubiquinone oxidoreductase, 17.2kDa subunit | chr4:13539717-13542041 FORWARD LENGTH=184	LOC_Os09g32430.1	protein|oxidoreductase, putative, expressed	NA	NA	NA	GO:0008137|NADH dehydrogenase (ubiquinone) activity GO:0009055|electron carrier activity GO:0016491|oxidoreductase activity	GO:0005634|nucleus GO:0005739|mitochondrion GO:0016020|membrane
pt2_00895	A	A2S	Potri.001G109500	Potri.001G109500(AS) Potri.003G122300(DS)	POPTR_0001s08840	NA	NA	AT4G11740.1	| Symbols: SAY1 | Ubiquitin-like superfamily protein | chr4:7071955-7075256 FORWARD LENGTH=564	LOC_Os09g35710.1	protein|UBX domain-containing protein, putative, expressed	NA	NA	GO:0016192|vesicle-mediated transport	NA	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol
pt2_00896	A	A1S	Potri.001G109400	Potri.001G109400(AS)	POPTR_0001s08850	sp|Q9CAN3|SCL28_ARATH	Scarecrow-like protein 28 OS=Arabidopsis thaliana GN=SCL28 PE=2 SV=1	AT1G63100.1	| Symbols: | GRAS family transcription factor | chr1:23399391-23401367 REVERSE LENGTH=658	LOC_Os06g03710.1	protein|DELLA protein SLR1, putative, expressed	IMGA|contig_52215_1.1	GAI-like protein contig_52215 101-2211 F PREDN 20111014	GO:0000226|microtubule cytoskeleton organization GO:0006355|regulation of transcription, DNA-dependent GO:0048451|petal formation GO:0048453|sepal formation	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00897	A	A1S	Potri.001G109300	Potri.001G109300(AS)	POPTR_0001s08860	sp|Q9FXW4|C80B2_COPJA	Probable (S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Coptis japonica GN=CYP80B2 PE=2 SV=1	AT1G33720.1	| Symbols: CYP76C6 | cytochrome P450, family 76, subfamily C, polypeptide 6 | chr1:12220957-12223981 REVERSE LENGTH=511	LOC_Os03g14400.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g007460.1	Cytochrome P450 monooxygenase chr5 1131766-1133659 E EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005783|endoplasmic reticulum
pt2_00898	A	A1S	Potri.001G109200	Potri.001G109200(AS)	POPTR_0001s08870	sp|Q8CHJ1|PIGU_RAT	Phosphatidylinositol glycan anchor biosynthesis class U protein OS=Rattus norvegicus GN=Pigu PE=1 SV=3	AT1G63110.1	| Symbols: | GPI transamidase subunit PIG-U | chr1:23404870-23407757 FORWARD LENGTH=469	LOC_Os02g46350.1	protein|GPI transamidase subunit PIG-U domain containing protein, expressed	NA	NA	GO:0006506|GPI anchor biosynthetic process GO:0042732|D-xylose metabolic process	NA	GO:0005739|mitochondrion GO:0005789|endoplasmic reticulum membrane GO:0005886|plasma membrane GO:0016021|integral to membrane
pt2_00899	A	A1S	Potri.001G109100	Potri.001G109100(AS)	POPTR_0001s08880	sp|Q7XU38|C87A3_ORYSJ	Cytochrome P450 87A3 OS=Oryza sativa subsp. japonica GN=CYP87A3 PE=2 SV=3	AT1G12740.1	| Symbols: CYP87A2 | cytochrome P450, family 87, subfamily A, polypeptide 2 | chr1:4342462-4344569 FORWARD LENGTH=472	LOC_Os04g48170.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g010750.1	Cytochrome P450 chr5 2706043-2703036 E EGN_Mt100125 20111014	GO:0006826|iron ion transport GO:0010106|cellular response to iron ion starvation GO:0010167|response to nitrate GO:0015706|nitrate transport GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005739|mitochondrion
pt2_00900	A	A1S	Potri.001G109000	Potri.001G109000(AS)	POPTR_0001s08890	sp|F4JP36|HAP2_ARATH	Protein HAPLESS 2 OS=Arabidopsis thaliana GN=HAP2 PE=2 SV=1	AT4G11720.1	| Symbols: HAP2, GCS1 | hapless 2 | chr4:7063291-7066784 FORWARD LENGTH=705	LOC_Os05g18730.1	protein|generative cell specific-1, putative, expressed	IMGA|Medtr5g010740.1	HAP2 chr5 2693911-2702762 H EGN_Mt100125 20111014	GO:0009567|double fertilization forming a zygote and endosperm GO:0010183|pollen tube guidance GO:0048235|pollen sperm cell differentiation	NA	GO:0005783|endoplasmic reticulum GO:0005886|plasma membrane
pt2_00901	A	A1S	Potri.001G108900	Potri.001G108900(AS)	POPTR_0001s08900	sp|Q05609|CTR1_ARATH	Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana GN=CTR1 PE=1 SV=1	AT4G23050.2	| Symbols: | PAS domain-containing protein tyrosine kinase family protein | chr4:12080112-12083708 FORWARD LENGTH=736	LOC_Os02g12810.1	protein|protein kinase domain containing protein, expressed	IMGA|Medtr5g010730.1	Tyrosine-protein kinase Lyn chr5 2690961-2684872 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006468|protein phosphorylation GO:0007165|signal transduction GO:0010155|regulation of proton transport GO:0046777|protein autophosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004712|protein serine/threonine/tyrosine kinase activity GO:0004871|signal transducer activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005829|cytosol GO:0005886|plasma membrane
pt2_00902	A	A1S	Potri.001G108800	Potri.001G108800(AS)	POPTR_0001s08910	NA	NA	AT4G23060.1	| Symbols: IQD22 | IQ-domain 22 | chr4:12087283-12090408 FORWARD LENGTH=484	LOC_Os04g48160.1	protein|IQ calmodulin-binding motif family protein, putative, expressed	NA	NA	GO:0009739|response to gibberellin stimulus	GO:0005516|calmodulin binding	GO:0005634|nucleus
pt2_00903	A	A1S	Potri.001G108700	Potri.001G108700(AS)	POPTR_0001s08920	NA	NA	AT1G63120.1	| Symbols: ATRBL2, RBL2 | RHOMBOID-like 2 | chr1:23409054-23410725 REVERSE LENGTH=317	LOC_Os11g47840.1	protein|OsRhmbd18 - Putative Rhomboid homologue, expressed	IMGA|contig_69015_1.1	Rhomboid family protein expressed contig_69015 1651-2320 H PREDN 20111014	GO:0006508|proteolysis	GO:0004252|serine-type endopeptidase activity	GO:0005794|Golgi apparatus GO:0009506|plasmodesma GO:0016021|integral to membrane
pt2_00904	A	A1S	Potri.001G108600	Potri.001G108600(AS)	POPTR_0001s08930	sp|Q6J163|5NG4_PINTA	Auxin-induced protein 5NG4 OS=Pinus taeda PE=2 SV=1	AT1G25270.1	| Symbols: | nodulin MtN21 /EamA-like transporter family protein | chr1:8857726-8859909 FORWARD LENGTH=355	LOC_Os04g34530.1	protein|integral membrane protein DUF6 containing protein, expressed	IMGA|Medtr1g114210.1	Auxin-induced protein 5NG4 chr1 33072149-33074364 H EGN_Mt100125 20111014	NA	NA	GO:0005576|extracellular region GO:0016020|membrane
pt2_00905	A	A1S	Potri.001G108500	Potri.001G108500(AS)	POPTR_0001s08940	sp|O49399|PP321_ARATH	Pentatricopeptide repeat-containing protein At4g18840 OS=Arabidopsis thaliana GN=PCMP-E101 PE=2 SV=2	AT4G18840.1	| Symbols: | Pentatricopeptide repeat (PPR-like) superfamily protein | chr4:10338719-10340356 REVERSE LENGTH=545	LOC_Os10g26070.1	protein|pentatricopeptide, putative, expressed	IMGA|Medtr5g091640.1	Pentatricopeptide repeat-containing protein chr5 38923729-38922101 E EGN_Mt100125 20111014	GO:0008150|biological_process GO:0016556|mRNA modification	NA	GO:0005575|cellular_component
pt2_00906	A	A1S	Potri.001G108400	Potri.001G108400(AS)	POPTR_0001s08950	NA	NA	AT4G11670.1	| Symbols: | Protein of unknown function (DUF810) | chr4:7044401-7052971 REVERSE LENGTH=1117	LOC_Os03g47930.1	protein|expressed protein	IMGA|Medtr1g107110.1	hypothetical protein chr1 31598271-31592980 E EGN_Mt100125 20111014	GO:0006486|protein glycosylation GO:0006888|ER to Golgi vesicle-mediated transport GO:0008150|biological_process GO:0043090|amino acid import	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00907	A	A1S	Potri.001G108400	Potri.001G108400(AS)	POPTR_0001s08950	NA	NA	AT4G11670.1	| Symbols: | Protein of unknown function (DUF810) | chr4:7044401-7052971 REVERSE LENGTH=1117	LOC_Os03g47930.1	protein|expressed protein	IMGA|Medtr1g107110.1	hypothetical protein chr1 31598271-31592980 E EGN_Mt100125 20111014	GO:0006486|protein glycosylation GO:0006888|ER to Golgi vesicle-mediated transport GO:0008150|biological_process GO:0043090|amino acid import	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00908	C	C1S	Potri.001G108400	Potri.001G108400(CS)	NA	NA	AT4G11670.1	| Symbols: | Protein of unknown function (DUF810) | chr4:7044401-7052971 REVERSE LENGTH=1117	LOC_Os03g47930.1	protein|expressed protein	IMGA|Medtr1g107110.1	hypothetical protein chr1 31598271-31592980 E EGN_Mt100125 20111014	GO:0006486|protein glycosylation GO:0006888|ER to Golgi vesicle-mediated transport GO:0008150|biological_process GO:0043090|amino acid import	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00909	A	A1S	Potri.001G108300	Potri.001G108300(AS)	POPTR_0001s08960	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process GO:0009627|systemic acquired resistance GO:0009693|ethylene biosynthetic process GO:0009697|salicylic acid biosynthetic process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_00910	A	A1S	Potri.001G108200	Potri.001G108200(AS)	POPTR_0001s08970	sp|Q9LUL8|PME26_ARATH	Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis thaliana GN=PME26 PE=2 SV=1	AT3G47670.1	| Symbols: | Plant invertase/pectin methylesterase inhibitor superfamily protein | chr3:17575019-17575849 REVERSE LENGTH=276	NA	NA	NA	NA	NA	GO:0004857|enzyme inhibitor activity GO:0030599|pectinesterase activity GO:0046910|pectinesterase inhibitor activity	GO:0005794|Golgi apparatus GO:0009507|chloroplast
pt2_00911	A	A1S	Potri.001G108100	Potri.001G108100(AS)	POPTR_0001s08990	sp|Q9T0D3|HFB2B_ARATH	Heat stress transcription factor B-2b OS=Arabidopsis thaliana GN=HSFB2B PE=2 SV=1	AT4G11660.1	| Symbols: AT-HSFB2B, HSFB2B | winged-helix DNA-binding transcription factor family protein | chr4:7043006-7044227 FORWARD LENGTH=377	LOC_Os08g43334.2	protein|HSF-type DNA-binding domain containing protein, expressed	IMGA|Medtr5g010680.1	Heat stress transcription factor B-2b chr5 2667148-2669083 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009408|response to heat GO:0009644|response to high light intensity GO:0010200|response to chitin GO:0042542|response to hydrogen peroxide GO:0045892|negative regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_00912	R	R	NA	NA	POPTR_0001s09000	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00913	G	G1	NA	NA	POPTR_0001s09010	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00914	C	C1S	Potri.001G107900	Potri.001G107900(CS)	sp|Q8W4E1|RH47_ARATH	DEAD-box ATP-dependent RNA helicase 47, mitochondrial OS=Arabidopsis thaliana GN=RH47 PE=1 SV=2	AT1G12770.1	| Symbols: ISE1, EMB1586 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:4351888-4353543 FORWARD LENGTH=551	LOC_Os03g12000.1	protein|DEAD-box ATP-dependent RNA helicase, putative, expressed	IMGA|Medtr1g085270.1	DEAD-box ATP-dependent RNA helicase chr1 22518383-22523341 E EGN_Mt100125 20111014	GO:0009663|plasmodesma organization GO:0009793|embryo development ending in seed dormancy GO:0010497|plasmodesmata-mediated intercellular transport	GO:0003676|nucleic acid binding GO:0003724|RNA helicase activity GO:0004386|helicase activity GO:0005524|ATP binding GO:0008026|ATP-dependent helicase activity	GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_00915	A	A2S	Potri.001G107600	Potri.001G107600(AS) Potri.001G102400(DS)	POPTR_0001s09030	sp|P50700|OSL3_ARATH	Osmotin-like protein OSM34 OS=Arabidopsis thaliana GN=OSM34 PE=2 SV=2	AT4G11650.1	| Symbols: ATOSM34, OSM34 | osmotin 34 | chr4:7025127-7026113 REVERSE LENGTH=244	LOC_Os03g46070.1	protein|thaumatin, putative, expressed	IMGA|Medtr5g010640.1	Pathogenesis-related thaumatin-like protein chr5 2649377-2643755 F EGN_Mt100125 20111014	GO:0009651|response to salt stress GO:0009816|defense response to bacterium, incompatible interaction GO:0009817|defense response to fungus, incompatible interaction GO:0051707|response to other organism	NA	GO:0005576|extracellular region
pt2_00916	A	A1S	Potri.001G107500	Potri.001G107500(AS)	POPTR_0001s09040	sp|Q54KJ8|T2EB_DICDI	General transcription factor IIE subunit 2 OS=Dictyostelium discoideum GN=gtf2e2 PE=3 SV=1	AT4G20330.1	| Symbols: | Transcription initiation factor TFIIE, beta subunit | chr4:10982683-10984039 REVERSE LENGTH=286	LOC_Os10g25770.2	protein|transcription initiation factor IIE subunit beta, putative, expressed	IMGA|Medtr5g010620.2	General transcription factor IIE subunit chr5 2639138-2634320 F EGN_Mt100125 20111014	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0006366|transcription from RNA polymerase II promoter GO:0006367|transcription initiation from RNA polymerase II promoter	NA	GO:0005634|nucleus GO:0005673|transcription factor TFIIE complex
pt2_00917	B	B2S	Potri.001G107400	Potri.001G107400(BS) Potri.003G124000(BS)	POPTR_0001s09050	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00918	A	A1S	Potri.001G107300	Potri.001G107300(AS)	POPTR_0001s09060	sp|Q9C8S9|RH48_ARATH	Probable DEAD-box ATP-dependent RNA helicase 48 OS=Arabidopsis thaliana GN=RH48 PE=3 SV=1	AT1G63250.1	| Symbols: | DEA(D/H)-box RNA helicase family protein | chr1:23463284-23466451 REVERSE LENGTH=798	LOC_Os02g57980.1	protein|DEAD/DEAH box helicase, putative, expressed	IMGA|contig_83207_1.1	ATP-dependent RNA helicase contig_83207 17-1570 H PREDN 20111014	NA	GO:0003676|nucleic acid binding GO:0004386|helicase activity GO:0005524|ATP binding GO:0008026|ATP-dependent helicase activity	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_00919	A	A1S	Potri.001G107200	Potri.001G107200(AS)	POPTR_0001s09070	NA	NA	AT1G63260.2	| Symbols: TET10 | tetraspanin10 | chr1:23466975-23468945 REVERSE LENGTH=258	LOC_Os10g35980.1	protein|tetraspanin family protein, putative, expressed	IMGA|Medtr5g030070.1	hypothetical protein chr5 12391997-12393827 F EGN_Mt100125 20111014	GO:0007568|aging	NA	GO:0005576|extracellular region GO:0005739|mitochondrion GO:0016021|integral to membrane
pt2_00920	A	A1S	Potri.001G107100	Potri.001G107100(AS)	POPTR_0001s09080	sp|P29675|SF3_HELAN	Pollen-specific protein SF3 OS=Helianthus annuus GN=SF3 PE=2 SV=1	AT3G61230.1	| Symbols: | GATA type zinc finger transcription factor family protein | chr3:22664601-22665503 REVERSE LENGTH=213	LOC_Os02g42820.1	protein|OsPLIM2a - LIM domain protein, putative actin-binding protein and transcription factor, expressed	IMGA|Medtr1g017950.1	Transcription factor lim1 chr1 5236878-5235441 F EGN_Mt100125 20111014	GO:0006944|cellular membrane fusion GO:0051017|actin filament bundle assembly	GO:0008270|zinc ion binding GO:0051015|actin filament binding	GO:0005737|cytoplasm GO:0015629|actin cytoskeleton
pt2_00921	A	A1S	Potri.001G107000	Potri.001G107000(AS)	POPTR_0001s09090	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003677|DNA binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00922	A	A1S	Potri.001G106900	Potri.001G106900(AS)	POPTR_0001s09100	sp|Q9ZVL3|NFYC3_ARATH	Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana GN=NFYC3 PE=2 SV=1	AT1G54830.3	| Symbols: NF-YC3 | nuclear factor Y, subunit C3 | chr1:20451672-20452325 FORWARD LENGTH=217	LOC_Os04g58680.1	protein|core histone H2A/H2B/H3/H4, putative, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_00923	A	A1S	Potri.001G106800	Potri.001G106800(AS)	POPTR_0001s09110	sp|Q9SV07|ASAT1_ARATH	Acyl-CoA--sterol O-acyltransferase 1 OS=Arabidopsis thaliana GN=ASAT1 PE=1 SV=1	AT3G51970.1	| Symbols: ATSAT1, ASAT1, ATASAT1 | acyl-CoA sterol acyl transferase 1 | chr3:19284420-19285457 FORWARD LENGTH=345	LOC_Os02g25700.1	protein|O-acyltransferase, putative, expressed	IMGA|Medtr5g094140.1	hypothetical protein chr5 40078555-40077150 H EGN_Mt100125 20111014	GO:0008150|biological_process GO:0016127|sterol catabolic process GO:0034434|sterol esterification	GO:0005515|protein binding GO:0016746|transferase activity, transferring acyl groups	GO:0009507|chloroplast
pt2_00924	A	A1S	Potri.001G106700	Potri.001G106700(AS)	POPTR_0001s09120	NA	NA	AT1G63300.1	| Symbols: | Myosin heavy chain-related protein | chr1:23482193-23486067 FORWARD LENGTH=1029	LOC_Os10g36060.1	protein|protein transport protein-related, putative, expressed	IMGA|Medtr5g010520.1	hypothetical protein chr5 2590332-2585570 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_00925	A	A1S	Potri.001G106600	Potri.001G106600(AS)	POPTR_0001s09130	sp|C0LGH8|Y1634_ARATH	Probable LRR receptor-like serine/threonine-protein kinase At1g63430 OS=Arabidopsis thaliana GN=At1g63430 PE=1 SV=1	AT1G63430.1	| Symbols: | Leucine-rich repeat protein kinase family protein | chr1:23522896-23526451 FORWARD LENGTH=664	LOC_Os04g58700.1	protein|expressed protein	IMGA|Medtr5g010440.2	hypothetical protein chr5 2558199-2554744 F EGN_Mt100125 20111014	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0006468|protein phosphorylation GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway GO:0009086|methionine biosynthetic process	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_00926	G	G1	NA	NA	POPTR_0001s09140	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00927	A	A1S	Potri.001G106400	Potri.001G106400(AS)	POPTR_0001s09150	sp|Q9SH27|LOR4_ARATH	Protein LURP-one-related 4 OS=Arabidopsis thaliana GN=At1g63410 PE=3 SV=1	AT1G63410.1	| Symbols: | Protein of unknown function (DUF567) | chr1:23510075-23511997 REVERSE LENGTH=208	LOC_Os07g47540.1	protein|DUF567 domain containing protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00928	B	B1S	Potri.001G106300	Potri.001G106300(BS)	POPTR_0001s09160	sp|Q9SH27|LOR4_ARATH	Protein LURP-one-related 4 OS=Arabidopsis thaliana GN=At1g63410 PE=3 SV=1	AT1G63410.1	| Symbols: | Protein of unknown function (DUF567) | chr1:23510075-23511997 REVERSE LENGTH=208	LOC_Os07g47540.1	protein|DUF567 domain containing protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00929	A	A1S	Potri.001G106200	Potri.001G106200(AS)	POPTR_0001s09170	sp|P30175|ADF_LILLO	Actin-depolymerizing factor OS=Lilium longiflorum PE=2 SV=1	AT4G00680.1	| Symbols: ADF8 | actin depolymerizing factor 8 | chr4:279780-280608 REVERSE LENGTH=140	LOC_Os02g44470.1	protein|actin-depolymerizing factor, putative, expressed	IMGA|Medtr5g010430.1	Actin depolymerizing factor chr5 2553660-2554177 H EGN_Mt100125 20111014	GO:0008150|biological_process GO:0010054|trichoblast differentiation	GO:0003779|actin binding	GO:0005622|intracellular GO:0005737|cytoplasm
pt2_00930	A	A2S	Potri.001G106100	Potri.001G106100(AS) Potri.003G125400(DS)	POPTR_0001s09180	sp|P29516|TBB8_ARATH	Tubulin beta-8 chain OS=Arabidopsis thaliana GN=TUBB8 PE=2 SV=2	AT5G23860.2	| Symbols: TUB8 | tubulin beta 8 | chr5:8042962-8044528 FORWARD LENGTH=449	LOC_Os03g01530.1	protein|tubulin/FtsZ domain containing protein, putative, expressed	IMGA|contig_53526_2.1	Tubulin beta chain contig_53526 5156-2874 H PREDN 20111014	GO:0006094|gluconeogenesis GO:0006184|GTP catabolic process GO:0007010|cytoskeleton organization GO:0009409|response to cold GO:0009651|response to salt stress GO:0010498|proteasomal protein catabolic process GO:0010583|response to cyclopentenone GO:0051258|protein polymerization	GO:0003924|GTPase activity GO:0005198|structural molecule activity GO:0005200|structural constituent of cytoskeleton GO:0005515|protein binding GO:0005525|GTP binding	GO:0005737|cytoplasm GO:0005794|Golgi apparatus GO:0005874|microtubule GO:0016020|membrane GO:0043234|protein complex GO:0045298|tubulin complex
pt2_00931	A	A1S	Potri.001G106000	Potri.001G106000(AS)	POPTR_0001s09190	sp|Q54HH2|SRR_DICDI	Probable serine racemase OS=Dictyostelium discoideum GN=srr PE=3 SV=1	AT4G11640.1	| Symbols: ATSR, SR | serine racemase | chr4:7021770-7023252 FORWARD LENGTH=331	LOC_Os04g46930.2	protein|serine racemase, putative, expressed	IMGA|contig_48629_2.1	Carbamoyltransferase contig_48629 2809-11844 I PREDN 20111014	GO:0006563|L-serine metabolic process GO:0009069|serine family amino acid metabolic process GO:0070178|D-serine metabolic process	GO:0003941|L-serine ammonia-lyase activity GO:0008721|D-serine ammonia-lyase activity GO:0030378|serine racemase activity	NA
pt2_00932	A	A1S	Potri.001G106000	Potri.001G106000(AS)	POPTR_0001s09190	sp|Q54HH2|SRR_DICDI	Probable serine racemase OS=Dictyostelium discoideum GN=srr PE=3 SV=1	AT4G11640.1	| Symbols: ATSR, SR | serine racemase | chr4:7021770-7023252 FORWARD LENGTH=331	LOC_Os04g46930.2	protein|serine racemase, putative, expressed	IMGA|contig_48629_2.1	Carbamoyltransferase contig_48629 2809-11844 I PREDN 20111014	GO:0006563|L-serine metabolic process GO:0009069|serine family amino acid metabolic process GO:0070178|D-serine metabolic process	GO:0003941|L-serine ammonia-lyase activity GO:0008721|D-serine ammonia-lyase activity GO:0030378|serine racemase activity	NA
pt2_00933	A	A1S	Potri.001G105900	Potri.001G105900(AS)	POPTR_0001s09200	sp|Q9SMT7|4CLLA_ARATH	4-coumarate--CoA ligase-like 10 OS=Arabidopsis thaliana GN=4CLL10 PE=2 SV=1	AT3G48990.1	| Symbols: | AMP-dependent synthetase and ligase family protein | chr3:18159031-18161294 REVERSE LENGTH=514	LOC_Os04g58710.1	protein|AMP-binding domain containing protein, expressed	IMGA|Medtr5g027480.1	4-coumarate-CoA ligase chr5 11195434-11192919 H EGN_Mt100125 20111014	GO:0010030|positive regulation of seed germination GO:0010167|response to nitrate GO:0010214|seed coat development GO:0015706|nitrate transport GO:0033611|oxalate catabolic process GO:0046482|para-aminobenzoic acid metabolic process GO:0046686|response to cadmium ion GO:0050832|defense response to fungus	GO:0016208|AMP binding GO:0050203|oxalate-CoA ligase activity	GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0009506|plasmodesma GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0048046|apoplast
pt2_00934	A	A1S	Potri.001G105800	Potri.001G105800(AS)	POPTR_0001s09210	sp|Q9SH30|HMA5_ARATH	Putative copper-transporting ATPase HMA5 OS=Arabidopsis thaliana GN=HMA5 PE=2 SV=2	AT1G63440.1	| Symbols: HMA5 | heavy metal atpase 5 | chr1:23527655-23531109 FORWARD LENGTH=995	LOC_Os04g46940.1	protein|copper-transporting ATPase 3, putative, expressed	IMGA|Medtr5g010420.1	Heavy metal P-type ATPase chr5 2546605-2543385 H EGN_Mt100125 20111014	GO:0006754|ATP biosynthetic process GO:0006812|cation transport GO:0008152|metabolic process GO:0010043|response to zinc ion GO:0010273|detoxification of copper ion GO:0030001|metal ion transport GO:0046034|ATP metabolic process GO:0046688|response to copper ion	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0005524|ATP binding GO:0015662|ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism GO:0043682|copper-transporting ATPase activity GO:0046872|metal ion binding	GO:0005886|plasma membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_00935	A	A1S	Potri.001G105700	Potri.001G105700(AS)	POPTR_0001s09220	sp|Q9SH30|HMA5_ARATH	Putative copper-transporting ATPase HMA5 OS=Arabidopsis thaliana GN=HMA5 PE=2 SV=2	AT1G63440.1	| Symbols: HMA5 | heavy metal atpase 5 | chr1:23527655-23531109 FORWARD LENGTH=995	LOC_Os04g46940.1	protein|copper-transporting ATPase 3, putative, expressed	IMGA|Medtr5g010420.1	Heavy metal P-type ATPase chr5 2546605-2543385 H EGN_Mt100125 20111014	GO:0006754|ATP biosynthetic process GO:0006812|cation transport GO:0008152|metabolic process GO:0010043|response to zinc ion GO:0010273|detoxification of copper ion GO:0030001|metal ion transport GO:0046034|ATP metabolic process GO:0046688|response to copper ion	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0005524|ATP binding GO:0015662|ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism GO:0043682|copper-transporting ATPase activity GO:0046872|metal ion binding	GO:0005886|plasma membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_00936	A	A1S	Potri.001G105600	Potri.001G105600(AS)	POPTR_0001s09230	sp|Q9ZRT5|GSTT1_ARATH	Glutathione S-transferase T1 OS=Arabidopsis thaliana GN=GSTT1 PE=2 SV=1	AT5G41210.1	| Symbols: ATGSTT1, GST10, GSTT1 | glutathione S-transferase THETA 1 | chr5:16492550-16493884 REVERSE LENGTH=245	LOC_Os11g37730.1	protein|glutathione S-transferase, N-terminal domain containing protein, expressed	NA	NA	GO:0009407|toxin catabolic process GO:0010583|response to cyclopentenone	GO:0004364|glutathione transferase activity	GO:0005737|cytoplasm
pt2_00937	C	C1S	Potri.001G105500	Potri.001G105500(CS)	sp|Q8L727|GSTT2_ARATH	Glutathione S-transferase T2 OS=Arabidopsis thaliana GN=GSTT2 PE=2 SV=1	AT5G41240.1	| Symbols: ATGSTT2, GST10B, GSTT2 | glutathione S-transferase THETA 2 | chr5:16498293-16500811 REVERSE LENGTH=591	LOC_Os11g37730.2	protein|glutathione S-transferase, N-terminal domain containing protein, expressed	NA	NA	GO:0009407|toxin catabolic process	GO:0004364|glutathione transferase activity	GO:0005737|cytoplasm
pt2_00938	A	A1S	Potri.001G105400	Potri.001G105400(AS)	POPTR_0001s09250	NA	NA	AT4G11610.1	| Symbols: | C2 calcium/lipid-binding plant phosphoribosyltransferase family protein | chr4:7013956-7017846 REVERSE LENGTH=1011	LOC_Os04g58720.1	protein|anthranilate phosphoribosyltransferase, putative, expressed	IMGA|Medtr5g010390.1	Glutathione peroxidase chr5 2530505-2527317 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_00939	A	A1S	Potri.001G105300	Potri.001G105300(AS)	POPTR_0001s09260	sp|Q8H038|KATAM_ORYSJ	Xyloglucan galactosyltransferase KATAMARI1 homolog OS=Oryza sativa subsp. japonica GN=Os03g0144800 PE=2 SV=1	AT1G63450.1	| Symbols: RHS8 | root hair specific 8 | chr1:23532523-23534517 FORWARD LENGTH=664	LOC_Os03g05110.1	protein|xyloglucan galactosyltransferase KATAMARI1, putative, expressed	IMGA|Medtr5g010370.1	Xyloglucan galactosyltransferase KATAMARI1 chr5 2522459-2520816 H EGN_Mt100125 20111014	NA	GO:0003824|catalytic activity	GO:0005794|Golgi apparatus GO:0016020|membrane
pt2_00940	A	A1S	Potri.001G105200	Potri.001G105200(AS)	POPTR_0001s09270	sp|O23814|GPX4_SPIOL	Probable phospholipid hydroperoxide glutathione peroxidase OS=Spinacia oleracea PE=2 SV=1	AT4G11600.1	| Symbols: ATGPX6, PHGPX, LSC803, GPX6 | glutathione peroxidase 6 | chr4:7010021-7011330 REVERSE LENGTH=232	LOC_Os04g46960.2	protein|glutathione peroxidase domain containing protein, expressed	IMGA|Medtr5g010340.1	Glutathione peroxidase chr5 2515823-2513474 H EGN_Mt100125 20111014	GO:0006333|chromatin assembly or disassembly GO:0006979|response to oxidative stress GO:0007623|circadian rhythm GO:0009407|toxin catabolic process GO:0009651|response to salt stress GO:0046686|response to cadmium ion GO:0055114|oxidation-reduction process	GO:0004602|glutathione peroxidase activity	GO:0005739|mitochondrion GO:0005829|cytosol GO:0005886|plasma membrane GO:0009507|chloroplast GO:0048046|apoplast
pt2_00941	A	A1S	Potri.001G105100	Potri.001G105100(AS)	POPTR_0001s09280	sp|Q8LBU2|GPX8_ARATH	Probable glutathione peroxidase 8 OS=Arabidopsis thaliana GN=GPX8 PE=2 SV=1	AT1G63460.1	| Symbols: GPX8, ATGPX8 | glutathione peroxidase 8 | chr1:23535118-23536326 FORWARD LENGTH=167	LOC_Os02g44500.1	protein|glutathione peroxidase, putative, expressed	IMGA|Medtr5g010340.1	Glutathione peroxidase chr5 2515823-2513474 H EGN_Mt100125 20111014	GO:0006979|response to oxidative stress GO:0009407|toxin catabolic process	GO:0004601|peroxidase activity GO:0004602|glutathione peroxidase activity	GO:0005634|nucleus GO:0005829|cytosol
pt2_00942	A	A2S	Potri.001G105000	Potri.001G105000(AS) Potri.001G105100(AA)	POPTR_0001s09290	NA	NA	NA	NA	NA	NA	IMGA|contig_104326_1.1	Ripening-related protein contig_104326 1319-741 H PREDN 20111014	NA	NA	NA
pt2_00943	A	A1S	Potri.001G104900	Potri.001G104900(AS)	POPTR_0001s09300	sp|Q9S7C9|ESCA_ARATH	Putative DNA-binding protein ESCAROLA OS=Arabidopsis thaliana GN=ESC PE=2 SV=1	AT1G63470.1	| Symbols: | AT hook motif DNA-binding family protein | chr1:23536831-23538863 REVERSE LENGTH=378	LOC_Os02g57820.1	protein|AT hook motif domain containing protein, expressed	IMGA|Medtr5g010330.1	DNA-binding PD1-like protein chr5 2508875-2512497 E EGN_Mt100125 20111014	GO:0000226|microtubule cytoskeleton organization GO:0000280|nuclear division GO:0006260|DNA replication GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0006346|methylation-dependent chromatin silencing GO:0007000|nucleolus organization GO:0007267|cell-cell signaling GO:0008150|biological_process GO:0008283|cell proliferation GO:0009616|virus induced gene silencing GO:0009909|regulation of flower development GO:0010267|production of ta-siRNAs involved in RNA interference GO:0016246|RNA interference GO:0016458|gene silencing GO:0016570|histone modification GO:0016571|histone methylation GO:0016572|histone phosphorylation GO:0031047|gene silencing by RNA GO:0031048|chromatin silencing by small RNA GO:0034968|histone lysine methylation GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0048449|floral organ formation GO:0051225|spindle assembly GO:0051567|histone H3-K9 methylation	GO:0003677|DNA binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00944	A	A1S	Potri.001G104800	Potri.001G104800(AS)	POPTR_0001s09310	sp|A4XKC6|RUVX_CALS8	Putative Holliday junction resolvase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=Csac_1776 PE=3 SV=1	AT3G52905.1	| Symbols: | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr3:19614142-19615471 REVERSE LENGTH=170	LOC_Os01g55900.1	protein|holliday junction resolvase, putative, expressed	IMGA|Medtr5g010310.1	Hypothetical protein chr5 2497928-2501809 E EGN_Mt100125 20111014	GO:0006139|nucleobase-containing compound metabolic process GO:0006281|DNA repair GO:0006310|DNA recombination GO:0006974|response to DNA damage stimulus	GO:0003676|nucleic acid binding GO:0016788|hydrolase activity, acting on ester bonds	GO:0005737|cytoplasm
pt2_00945	A	A1S	Potri.001G104700	Potri.001G104700(AS)	POPTR_0001s09320	sp|Q9FHD7|Y5126_ARATH	Probable serine/threonine-protein kinase At5g41260 OS=Arabidopsis thaliana GN=At5g41260 PE=1 SV=1	AT1G63500.1	| Symbols: | Protein kinase protein with tetratricopeptide repeat domain | chr1:23556015-23558403 FORWARD LENGTH=487	LOC_Os10g42110.1	protein|protein kinase family protein, putative, expressed	IMGA|Medtr5g098970.1	Receptor like protein kinase chr5 42299884-42292251 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane GO:0009506|plasmodesma
pt2_00946	B	B1S	Potri.001G104600	Potri.001G104600(BS)	POPTR_0001s09330	sp|Q9ZPN9|TBB2_ELEIN	Tubulin beta-2 chain OS=Eleusine indica GN=TUBB2 PE=2 SV=1	AT5G12250.1	| Symbols: TUB6 | beta-6 tubulin | chr5:3961317-3962971 REVERSE LENGTH=449	LOC_Os01g59150.2	protein|tubulin/FtsZ domain containing protein, putative, expressed	IMGA|contig_53526_2.1	Tubulin beta chain contig_53526 5156-2874 H PREDN 20111014	GO:0000271|polysaccharide biosynthetic process GO:0006084|acetyl-CoA metabolic process GO:0006094|gluconeogenesis GO:0006096|glycolysis GO:0006184|GTP catabolic process GO:0006833|water transport GO:0006972|hyperosmotic response GO:0007010|cytoskeleton organization GO:0007030|Golgi organization GO:0009266|response to temperature stimulus GO:0009409|response to cold GO:0009651|response to salt stress GO:0009740|gibberellic acid mediated signaling pathway GO:0009825|multidimensional cell growth GO:0009932|cell tip growth GO:0010162|seed dormancy process GO:0010498|proteasomal protein catabolic process GO:0010817|regulation of hormone levels GO:0016126|sterol biosynthetic process GO:0016132|brassinosteroid biosynthetic process GO:0019344|cysteine biosynthetic process GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0046686|response to cadmium ion GO:0048767|root hair elongation GO:0051258|protein polymerization GO:0071555|cell wall organization	GO:0003924|GTPase activity GO:0005198|structural molecule activity GO:0005200|structural constituent of cytoskeleton GO:0005525|GTP binding	GO:0005737|cytoplasm GO:0005874|microtubule GO:0005886|plasma membrane GO:0015630|microtubule cytoskeleton GO:0043234|protein complex
pt2_00947	A	A1S	Potri.001G104500	Potri.001G104500(AS)	POPTR_0001s09340	sp|O22493|GSH1_SOLLC	Glutamate--cysteine ligase, chloroplastic OS=Solanum lycopersicum GN=GSH1 PE=2 SV=1	AT4G23100.3	| Symbols: GSH1 | glutamate-cysteine ligase | chr4:12103458-12106751 REVERSE LENGTH=522	LOC_Os05g03820.1	protein|glutamate--cysteine ligase, chloroplast precursor, putative, expressed	IMGA|Medtr5g010250.1	Glutamate-cysteine ligase chr5 2453836-2457263 F EGN_Mt100125 20111014	GO:0002213|defense response to insect GO:0006007|glucose catabolic process GO:0006094|gluconeogenesis GO:0006096|glycolysis GO:0006750|glutathione biosynthetic process GO:0009408|response to heat GO:0009651|response to salt stress GO:0009700|indole phytoalexin biosynthetic process GO:0009753|response to jasmonic acid stimulus GO:0009816|defense response to bacterium, incompatible interaction GO:0009908|flower development GO:0010193|response to ozone GO:0019344|cysteine biosynthetic process GO:0019761|glucosinolate biosynthetic process GO:0030244|cellulose biosynthetic process GO:0042742|defense response to bacterium GO:0046686|response to cadmium ion GO:0050832|defense response to fungus GO:0052544|defense response by callose deposition in cell wall	GO:0004357|glutamate-cysteine ligase activity	GO:0009507|chloroplast GO:0009536|plastid GO:0009570|chloroplast stroma
pt2_00948	A	A2S	Potri.T159100	Potri.T159100(AS) Potri.001G104400(AS)	POPTR_0001s09350	sp|Q9X0Y1|P1254_THEMA	Phosphorylated carbohydrates phosphatase TM_1254 OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=TM_1254 PE=1 SV=1	AT4G11570.2	| Symbols: | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr4:7004743-7005864 FORWARD LENGTH=373	LOC_Os09g39560.1	protein|genetic modifier, putative, expressed	NA	NA	GO:0008152|metabolic process GO:0015996|chlorophyll catabolic process	GO:0003824|catalytic activity GO:0016787|hydrolase activity	GO:0005634|nucleus
pt2_00949	A	A1S	Potri.T159200	Potri.T159200(AS)	POPTR_0001s09360	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00950	A	A1S	Potri.T159200	Potri.T159200(AS)	POPTR_0001s09370	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00951	A	A1S	Potri.001G104300	Potri.001G104300(AS)	POPTR_0001s09380	NA	NA	AT4G11560.1	| Symbols: | bromo-adjacent homology (BAH) domain-containing protein | chr4:7000095-7003445 REVERSE LENGTH=587	LOC_Os01g34330.1	protein|BAH domain containing protein, expressed	IMGA|Medtr5g010190.1	BAH and coiled-coil domain-containing protein chr5 2430335-2425135 F EGN_Mt100125 20111014	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0006351|transcription, DNA-dependent GO:0009630|gravitropism	GO:0003677|DNA binding	GO:0005634|nucleus
pt2_00952	A	A1S	Potri.001G104200	Potri.001G104200(AS)	POPTR_0001s09390	NA	NA	AT4G11450.1	| Symbols: | Protein of unknown function (DUF3527) | chr4:6959065-6961223 REVERSE LENGTH=694	LOC_Os10g40324.1	protein|expressed protein	NA	NA	GO:0008150|biological_process GO:0010089|xylem development GO:0044036|cell wall macromolecule metabolic process	NA	GO:0005634|nucleus
pt2_00953	A	A1S	Potri.001G104100	Potri.001G104100(AS)	POPTR_0001s09400	NA	NA	NA	NA	NA	NA	NA	NA	GO:0009616|virus induced gene silencing GO:0010025|wax biosynthetic process GO:0010050|vegetative phase change GO:0010267|production of ta-siRNAs involved in RNA interference GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0051607|defense response to virus	NA	GO:0005737|cytoplasm GO:0005783|endoplasmic reticulum GO:0005829|cytosol
pt2_00954	A	A1S	Potri.001G104000	Potri.001G104000(AS)	POPTR_0001s09410	sp|O81635|ATK4_ARATH	Kinesin-4 OS=Arabidopsis thaliana GN=ATK4 PE=1 SV=2	AT1G63640.1	| Symbols: | P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain | chr1:23589234-23595139 REVERSE LENGTH=1071	LOC_Os01g54080.1	protein|kinesin motor protein-related, putative, expressed	IMGA|Medtr5g096570.1	Kinesin-4 chr5 41201995-41191073 E EGN_Mt100125 20111014	GO:0000226|microtubule cytoskeleton organization GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0006346|methylation-dependent chromatin silencing GO:0007267|cell-cell signaling GO:0009616|virus induced gene silencing GO:0009909|regulation of flower development GO:0010267|production of ta-siRNAs involved in RNA interference GO:0016458|gene silencing GO:0016570|histone modification GO:0016572|histone phosphorylation GO:0031047|gene silencing by RNA GO:0031048|chromatin silencing by small RNA GO:0034968|histone lysine methylation GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0048449|floral organ formation GO:0051567|histone H3-K9 methylation	GO:0003777|microtubule motor activity GO:0005524|ATP binding	GO:0005886|plasma membrane
pt2_00955	A	A1S	Potri.001G103900	Potri.001G103900(AS)	POPTR_0001s09420	sp|Q9P0P0|RN181_HUMAN	E3 ubiquitin-protein ligase RNF181 OS=Homo sapiens GN=RNF181 PE=1 SV=1	AT4G26400.1	| Symbols: | RING/U-box superfamily protein | chr4:13344953-13346023 REVERSE LENGTH=356	LOC_Os03g22830.2	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr5g041330.1	RING finger protein chr5 17745449-17746282 H EGN_Mt100125 20111014	GO:0000303|response to superoxide GO:0009651|response to salt stress GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009743|response to carbohydrate stimulus GO:0009873|ethylene mediated signaling pathway GO:0010200|response to chitin	GO:0008270|zinc ion binding	NA
pt2_00956	A	A1S	Potri.001G103800	Potri.001G103800(AS)	POPTR_0001s09430	NA	NA	AT4G23330.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2365 (InterPro:IPR019314). | chr4:12192136-12193383 FORWARD LENGTH=147	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus GO:0005737|cytoplasm
pt2_00957	A	A1S	Potri.001G103700	Potri.001G103700(AS)	POPTR_0001s09440	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00958	A	A1S	Potri.001G103600	Potri.001G103600(AS)	POPTR_0001s09450	sp|Q9FN69|GL3_ARATH	Transcription factor GLABRA 3 OS=Arabidopsis thaliana GN=GL3 PE=1 SV=1	AT5G41315.1	| Symbols: GL3, MYC6.2 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr5:16529457-16532866 FORWARD LENGTH=637	LOC_Os04g47080.1	protein|anthocyanin regulatory Lc protein, putative, expressed	IMGA|Medtr1g072320.1	Transcription factor TT8 chr1 18090629-18083194 H EGN_Mt100125 20111014	GO:0001708|cell fate specification GO:0009957|epidermal cell fate specification GO:0010091|trichome branching	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_00959	A	A1S	Potri.001G103500	Potri.001G103500(AS)	POPTR_0001s09460	sp|Q42556|PMA9_ARATH	ATPase 9, plasma membrane-type OS=Arabidopsis thaliana GN=AHA9 PE=2 SV=2	AT1G80660.2	| Symbols: HA9 | H(+)-ATPase 9 | chr1:30316227-30319948 REVERSE LENGTH=945	LOC_Os04g56160.2	protein|plasma membrane ATPase, putative, expressed	IMGA|contig_93597_1.1	H-ATPase contig_93597 548-3166 H PREDN 20111014	GO:0006200|ATP catabolic process GO:0006754|ATP biosynthetic process GO:0006812|cation transport GO:0008152|metabolic process GO:0015992|proton transport	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0005524|ATP binding GO:0008553|hydrogen-exporting ATPase activity, phosphorylative mechanism GO:0015662|ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism GO:0016887|ATPase activity GO:0046872|metal ion binding	GO:0005774|vacuolar membrane GO:0005886|plasma membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_00960	A	A1S	Potri.001G103400	Potri.001G103400(AS)	POPTR_0001s09470	NA	NA	AT2G45900.1	| Symbols: | Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related | chr2:18886069-18888674 REVERSE LENGTH=720	LOC_Os03g01580.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00961	A	A1S	Potri.001G103300	Potri.001G103300(AS)	POPTR_0001s09480	sp|Q65JY4|MURE_BACLD	 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=murE PE=3 SV=1	AT1G63680.1	| Symbols: ATMURE, PDE316, MURE | acid-amino acid ligases;ligases;ATP binding;ATP binding;ligases | chr1:23614461-23617247 FORWARD LENGTH=772	LOC_Os10g40130.1	protein|Mur ligase family protein, putative, expressed	NA	NA	GO:0006364|rRNA processing GO:0006399|tRNA metabolic process GO:0008360|regulation of cell shape GO:0009058|biosynthetic process GO:0009658|chloroplast organization GO:0009902|chloroplast relocation GO:0010020|chloroplast fission GO:0010027|thylakoid membrane organization GO:0034660|ncRNA metabolic process GO:0042793|transcription from plastid promoter GO:0045893|positive regulation of transcription, DNA-dependent	GO:0005524|ATP binding GO:0016874|ligase activity GO:0016881|acid-amino acid ligase activity	GO:0005737|cytoplasm GO:0009295|nucleoid GO:0009507|chloroplast
pt2_00962	A	A1S	Potri.001G103200	Potri.001G103200(AS)	POPTR_0001s09490	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00963	A	A1S	Potri.001G103100	Potri.001G103100(AS)	POPTR_0001s09500	sp|Q5F383|SPP2B_CHICK	Signal peptide peptidase-like 2B OS=Gallus gallus GN=SPPL2B PE=2 SV=1	AT1G63690.1	| Symbols: ATSPPL2, SPPL2 | SIGNAL PEPTIDE PEPTIDASE-LIKE 2 | chr1:23618490-23622082 FORWARD LENGTH=540	LOC_Os06g51430.1	protein|signal peptide peptidase-like 2B, putative, expressed	IMGA|Medtr1g116800.1	hypothetical protein chr1 34048331-34047060 H EGN_Mt100125 20111014	GO:0006508|proteolysis	GO:0004190|aspartic-type endopeptidase activity GO:0008233|peptidase activity	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005886|plasma membrane
pt2_00964	A	A1S	Potri.001G103000	Potri.001G103000(AS)	POPTR_0001s09510	sp|Q6RVV4|TIC32_PEA	Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum GN=TIC32 PE=1 SV=1	AT4G11410.1	| Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr4:6945127-6947186 REVERSE LENGTH=317	LOC_Os09g39670.1	protein|oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed	IMGA|contig_12100_1.1	Retinol dehydrogenase contig_12100 683-1422 E PREDN 20111014	GO:0008152|metabolic process	GO:0000166|nucleotide binding GO:0016491|oxidoreductase activity	GO:0009507|chloroplast
pt2_00965	A	A1S	Potri.001G102900	Potri.001G102900(AS)	POPTR_0001s09520	sp|Q9FZ36|M3K2_ARATH	Mitogen-activated protein kinase kinase kinase 2 OS=Arabidopsis thaliana GN=ANP2 PE=2 SV=1	AT1G63700.1	| Symbols: EMB71, YDA, MAPKKK4 | Protein kinase superfamily protein | chr1:23625208-23629031 REVERSE LENGTH=883	LOC_Os04g47240.1	protein|STE_MEKK_ste11_MAP3K.17 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	IMGA|Medtr5g017890.1	Mitogen-activated protein kinase kinase kinase A chr5 6370522-6365746 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0007155|cell adhesion GO:0009793|embryo development ending in seed dormancy GO:0010090|trichome morphogenesis GO:0010103|stomatal complex morphogenesis GO:0045010|actin nucleation GO:0048765|root hair cell differentiation GO:0071555|cell wall organization	GO:0004672|protein kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_00966	A	A1S	Potri.001G102800	Potri.001G102800(AS)	POPTR_0001s09530	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_00967	A	A1S	Potri.001G102700	Potri.001G102700(AS)	POPTR_0001s09540	sp|O65780|GALE1_CYATE	UDP-glucose 4-epimerase GEPI42 OS=Cyamopsis tetragonoloba PE=2 SV=1	AT1G12780.1	| Symbols: UGE1, ATUGE1 | UDP-D-glucose/UDP-D-galactose 4-epimerase 1 | chr1:4356124-4358120 REVERSE LENGTH=351	LOC_Os09g35800.1	protein|UDP-glucose 4-epimerase, putative, expressed	IMGA|Medtr5g009170.1	UDP-glucose 4-epimerase chr5 1896587-1893288 F EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0006012|galactose metabolic process GO:0006950|response to stress GO:0044237|cellular metabolic process GO:0046369|galactose biosynthetic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0003978|UDP-glucose 4-epimerase activity GO:0016857|racemase and epimerase activity, acting on carbohydrates and derivatives GO:0046983|protein dimerization activity GO:0050662|coenzyme binding	GO:0005794|Golgi apparatus GO:0005829|cytosol GO:0005886|plasma membrane
pt2_00968	A	A2S	Potri.001G102600	Potri.001G102600(AS) Potri.001G102500(AA)	POPTR_0001s09550	sp|Q3EA54|CSPLL_ARATH	CASP-like protein At4g11655 OS=Arabidopsis thaliana GN=At4g11655 PE=2 SV=1	AT4G11655.1	| Symbols: | Uncharacterised protein family (UPF0497) | chr4:7038590-7039759 FORWARD LENGTH=208	NA	NA	NA	NA	NA	NA	GO:0016020|membrane
pt2_00969	A	A2S	Potri.001G102500	Potri.001G102500(AS) Potri.001G102600(AA)	POPTR_0001s09560	sp|Q8W4E1|RH47_ARATH	DEAD-box ATP-dependent RNA helicase 47, mitochondrial OS=Arabidopsis thaliana GN=RH47 PE=1 SV=2	AT1G12770.1	| Symbols: ISE1, EMB1586 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:4351888-4353543 FORWARD LENGTH=551	LOC_Os02g42406.1	protein|DEAD-box ATP-dependent RNA helicase, putative, expressed	IMGA|Medtr5g090120.1	DEAD-box ATP-dependent RNA helicase chr5 38208428-38214693 E EGN_Mt100125 20111014	GO:0009663|plasmodesma organization GO:0009793|embryo development ending in seed dormancy GO:0010497|plasmodesmata-mediated intercellular transport	GO:0003676|nucleic acid binding GO:0003724|RNA helicase activity GO:0004386|helicase activity GO:0005524|ATP binding GO:0008026|ATP-dependent helicase activity	GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_00970	A	A2S	Potri.001G102400	Potri.001G102400(AS) Potri.001G107600(DS)	POPTR_0001s09570	sp|P50700|OSL3_ARATH	Osmotin-like protein OSM34 OS=Arabidopsis thaliana GN=OSM34 PE=2 SV=2	AT4G11650.1	| Symbols: ATOSM34, OSM34 | osmotin 34 | chr4:7025127-7026113 REVERSE LENGTH=244	LOC_Os03g46070.1	protein|thaumatin, putative, expressed	IMGA|Medtr5g010640.1	Pathogenesis-related thaumatin-like protein chr5 2649377-2643755 F EGN_Mt100125 20111014	GO:0009651|response to salt stress GO:0009816|defense response to bacterium, incompatible interaction GO:0009817|defense response to fungus, incompatible interaction GO:0051707|response to other organism	NA	GO:0005576|extracellular region
pt2_00971	A	A2S	Potri.001G102300	Potri.001G102300(AS) Potri.003G129300(DS)	POPTR_0001s09580	sp|Q9FN67|Y5133_ARATH	BTB/POZ domain-containing protein At5g41330 OS=Arabidopsis thaliana GN=At5g41330 PE=2 SV=1	AT5G41330.1	| Symbols: | BTB/POZ domain with WD40/YVTN repeat-like protein | chr5:16536452-16537828 REVERSE LENGTH=458	LOC_Os07g23720.1	protein|B4-BTB4 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed	NA	NA	GO:0006813|potassium ion transport	GO:0005249|voltage-gated potassium channel activity	GO:0005634|nucleus GO:0008076|voltage-gated potassium channel complex GO:0016020|membrane
pt2_00972	A	A2S	Potri.001G102200	Potri.001G102200(AS) Potri.003G129400(DS)	POPTR_0001s09590	sp|Q9SRE5|Y1666_ARATH	Uncharacterized protein At1g76660 OS=Arabidopsis thaliana GN=At1g76660 PE=1 SV=1	AT5G52430.1	| Symbols: | hydroxyproline-rich glycoprotein family protein | chr5:21283093-21285045 REVERSE LENGTH=438	LOC_Os02g57610.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_00973	A	A3S	Potri.001G102000	Potri.001G102000(AS) Potri.001G102100(AS) Potri.003G129500(DS)	POPTR_0001s09600	sp|P04825|AMPN_ECOLI	Aminopeptidase N OS=Escherichia coli (strain K12) GN=pepN PE=1 SV=2	AT1G63770.3	| Symbols: | Peptidase M1 family protein | chr1:23657791-23664243 REVERSE LENGTH=987	LOC_Os08g44860.8	protein|aminopeptidase, putative, expressed	IMGA|contig_98730_1.1	Aminopeptidase N contig_98730 766-35 H PREDN 20111014	GO:0006508|proteolysis GO:0019243|methylglyoxal catabolic process to D-lactate GO:0046686|response to cadmium ion	GO:0008237|metallopeptidase activity GO:0008270|zinc ion binding	GO:0005773|vacuole GO:0005829|cytosol GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope GO:0048046|apoplast
pt2_00974	A	A2S	Potri.001G101900	Potri.001G101900(AS) Potri.003G129700(DS)	POPTR_0001s09610	sp|P42748|UBC4_ARATH	Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana GN=UBC4 PE=2 SV=2	AT5G41340.1	| Symbols: UBC4, ATUBC4 | ubiquitin conjugating enzyme 4 | chr5:16538296-16539956 REVERSE LENGTH=187	LOC_Os10g31000.1	protein|ubiquitin-conjugating enzyme, putative, expressed	IMGA|Medtr5g075580.1	Ubiquitin carrier protein chr5 31157779-31152864 E EGN_Mt100125 20111014	GO:0006511|ubiquitin-dependent protein catabolic process	GO:0004842|ubiquitin-protein ligase activity GO:0016881|acid-amino acid ligase activity	GO:0005634|nucleus GO:0005829|cytosol
pt2_00975	A	A1S	Potri.001G101800	Potri.001G101800(AS)	POPTR_0001s09620	sp|Q9LDD4|ARID2_ARATH	AT-rich interactive domain-containing protein 2 OS=Arabidopsis thaliana GN=ARID2 PE=2 SV=1	AT4G11400.1	| Symbols: | ARID/BRIGHT DNA-binding domain;ELM2 domain protein | chr4:6938717-6940539 FORWARD LENGTH=573	LOC_Os04g08410.1	protein|ELM2 domain containing protein, putative, expressed	IMGA|contig_55942_1.1	ARID/BRIGHT DNA-binding domain-containing protein contig_55942 4683-1604 H PREDN 20111014	NA	GO:0003677|DNA binding	GO:0005622|intracellular GO:0005634|nucleus GO:0005773|vacuole
pt2_00976	A	A2S	Potri.001G101700	Potri.001G101700(AS) Potri.003G129900(DS)	POPTR_0001s09630	sp|Q8LE94|RING3_ARATH	E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana GN=At3g02290 PE=2 SV=1	AT5G41350.1	| Symbols: | RING/U-box superfamily protein | chr5:16542026-16543092 REVERSE LENGTH=212	LOC_Os11g18947.1	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr5g046970.1	E3 ubiquitin-protein ligase chr5 20175519-20174021 I EGN_Mt100125 20111014	GO:0006914|autophagy GO:0045892|negative regulation of transcription, DNA-dependent	GO:0008270|zinc ion binding	GO:0005634|nucleus GO:0005739|mitochondrion
pt2_00977	A	A1S	Potri.001G101600	Potri.001G101600(AS)	POPTR_0001s09640	NA	NA	AT1G75060.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19330.2); Has 104 Blast hits to 104 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 104; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:28181481-28183285 REVERSE LENGTH=241	LOC_Os04g08450.2	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00978	C	C1S	Potri.001G101500	Potri.001G101500(CS)	NA	NA	AT4G35785.3	| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr4:16953708-16955127 REVERSE LENGTH=207	LOC_Os08g29650.1	protein|RNA recognition motif containing protein, expressed	IMGA|Medtr5g023060.1	Scaffold attachment factor B1 chr5 8907854-8910694 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding	GO:0005634|nucleus GO:0030529|ribonucleoprotein complex
pt2_00979	A	A1S	Potri.001G101400	Potri.001G101400(AS)	POPTR_0001s09660	sp|O81742|APBLC_ARATH	Beta-adaptin-like protein C OS=Arabidopsis thaliana GN=BETAC-AD PE=1 SV=2	AT4G23460.1	| Symbols: | Adaptin family protein | chr4:12243899-12248898 REVERSE LENGTH=893	LOC_Os03g23950.1	protein|adapitin protein, putative, expressed	IMGA|Medtr5g079920.1	AP-3 complex subunit beta-2 chr5 33184416-33174348 E EGN_Mt100125 20111014	GO:0006886|intracellular protein transport GO:0015031|protein transport GO:0016192|vesicle-mediated transport	GO:0008565|protein transporter activity GO:0030276|clathrin binding	GO:0005634|nucleus GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0030117|membrane coat GO:0030131|clathrin adaptor complex
pt2_00980	A	A1S	Potri.001G101300	Potri.001G101300(AS)	POPTR_0001s09670	sp|Q38861|XPB1_ARATH	DNA repair helicase XPB1 OS=Arabidopsis thaliana GN=XPB1 PE=2 SV=3	AT5G41370.1	| Symbols: XPB1, ATXPB1 | homolog of xeroderma pigmentosum complementation group B 1 | chr5:16551337-16555792 FORWARD LENGTH=767	LOC_Os01g49680.1	protein|DNA repair helicase XPB2, putative, expressed	NA	NA	GO:0006289|nucleotide-excision repair GO:0009411|response to UV GO:0009636|response to toxin	GO:0003676|nucleic acid binding GO:0003677|DNA binding GO:0004003|ATP-dependent DNA helicase activity GO:0004386|helicase activity GO:0005524|ATP binding GO:0008026|ATP-dependent helicase activity GO:0016787|hydrolase activity	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_00981	A	A1S	Potri.001G101300	Potri.001G101300(AS)	POPTR_0001s09670	sp|Q38861|XPB1_ARATH	DNA repair helicase XPB1 OS=Arabidopsis thaliana GN=XPB1 PE=2 SV=3	AT5G41370.1	| Symbols: XPB1, ATXPB1 | homolog of xeroderma pigmentosum complementation group B 1 | chr5:16551337-16555792 FORWARD LENGTH=767	LOC_Os01g49680.1	protein|DNA repair helicase XPB2, putative, expressed	NA	NA	GO:0006289|nucleotide-excision repair GO:0009411|response to UV GO:0009636|response to toxin	GO:0003676|nucleic acid binding GO:0003677|DNA binding GO:0004003|ATP-dependent DNA helicase activity GO:0004386|helicase activity GO:0005524|ATP binding GO:0008026|ATP-dependent helicase activity GO:0016787|hydrolase activity	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_00982	A	A1S	Potri.001G101200	Potri.001G101200(AS)	POPTR_0001s09680	NA	NA	AT5G41380.1	| Symbols: | CCT motif family protein | chr5:16562129-16563553 REVERSE LENGTH=307	LOC_Os05g38990.1	protein|CCT motif family protein, expressed	IMGA|Medtr5g010120.1	Zinc finger protein CONSTANS-like protein chr5 2398574-2400307 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00983	A	A1S	Potri.001G101100	Potri.001G101100(AS)	POPTR_0001s09690	NA	NA	AT1G63830.3	| Symbols: | PLAC8 family protein | chr1:23685408-23687098 FORWARD LENGTH=232	LOC_Os03g03180.1	protein|uncharacterized Cys-rich domain containing protein, putative, expressed	NA	NA	NA	NA	GO:0005886|plasma membrane GO:0016020|membrane
pt2_00984	B	B1S	Potri.001G101000	Potri.001G101000(BS)	POPTR_0001s09700	sp|Q9SUS5|RHA1B_ARATH	E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis thaliana GN=RHA1B PE=2 SV=1	AT3G61460.1	| Symbols: BRH1 | brassinosteroid-responsive RING-H2 | chr3:22741701-22742213 REVERSE LENGTH=170	LOC_Os02g45710.1	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr5g010100.1	RING zinc finger protein-like protein chr5 2395799-2396606 F EGN_Mt100125 20111014	GO:0007165|signal transduction GO:0009414|response to water deprivation GO:0009611|response to wounding GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009753|response to jasmonic acid stimulus GO:0042538|hyperosmotic salinity response	GO:0008270|zinc ion binding	NA
pt2_00985	A	A2S	Potri.001G100900	Potri.001G100900(AS) Potri.003G131000(DS)	POPTR_0001s09710	sp|Q9CAJ9|Y1385_ARATH	BTB/POZ domain-containing protein At1g63850 OS=Arabidopsis thaliana GN=At1g63850 PE=1 SV=1	AT1G63850.1	| Symbols: | BTB/POZ domain-containing protein | chr1:23696962-23698708 FORWARD LENGTH=548	LOC_Os04g49060.1	protein|H-BTB3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed	NA	NA	GO:0008150|biological_process	NA	GO:0005634|nucleus
pt2_00986	A	A1S	Potri.001G100800	Potri.001G100800(AS)	POPTR_0001s09720	sp|Q38897|BEL1_ARATH	Homeobox protein BEL1 homolog OS=Arabidopsis thaliana GN=BEL1 PE=1 SV=2	AT5G41410.1	| Symbols: BEL1 | POX (plant homeobox) family protein | chr5:16580424-16583770 FORWARD LENGTH=611	LOC_Os10g39030.1	protein|homeobox domain containing protein, expressed	IMGA|Medtr5g018860.1	BEL1-like homeodomain protein chr5 6810765-6801813 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0048481|ovule development GO:0048513|organ development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus GO:0005829|cytosol GO:0009506|plasmodesma
pt2_00987	A	A1S	Potri.001G100700	Potri.001G100700(AS)	POPTR_0001s09730	NA	NA	AT4G23490.1	| Symbols: | Protein of unknown function (DUF604) | chr4:12251580-12253973 REVERSE LENGTH=526	LOC_Os04g48950.1	protein|fringe-related protein, putative, expressed	IMGA|Medtr5g010070.1	hypothetical protein chr5 2381571-2385382 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0016757|transferase activity, transferring glycosyl groups	GO:0005794|Golgi apparatus
pt2_00988	A	A1S	Potri.001G100600	Potri.001G100600(AS)	POPTR_0001s09740	sp|Q9SVP7|PP307_ARATH	Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2	AT4G13650.1	| Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr4:7939611-7942898 REVERSE LENGTH=1064	LOC_Os01g25270.1	protein|pentatricopeptide repeat protein PPR986-12, putative, expressed	IMGA|Medtr1g071240.1	Pentatricopeptide repeat-containing protein chr1 17511913-17505644 H EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_00989	A	A1S	Potri.001G100500	Potri.001G100500(AS)	POPTR_0001s09750	NA	NA	AT5G41470.1	| Symbols: | Nuclear transport factor 2 (NTF2) family protein | chr5:16593953-16595419 FORWARD LENGTH=277	LOC_Os03g64380.1	protein|expressed protein	IMGA|Medtr5g010050.1	hypothetical protein chr5 2376223-2374874 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_00990	A	A1S	Potri.001G100300	Potri.001G100300(AS)	POPTR_0001s09760	NA	NA	AT1G28140.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2301, transmembrane (InterPro:IPR019275); Has 140 Blast hits to 140 proteins in 72 species: Archae - 0; Bacteria - 86; Metazoa - 10; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). | chr1:9833029-9834390 REVERSE LENGTH=280	LOC_Os03g63360.1	protein|glutathione S-transferase, putative, expressed	IMGA|Medtr1g099520.1	hypothetical protein chr1 28893952-28891727 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_00991	A	A1S	Potri.001G100200	Potri.001G100200(AS)	POPTR_0001s09770	sp|O49814|BCH2_CAPAN	Beta-carotene hydroxylase 2, chloroplastic (Fragment) OS=Capsicum annuum GN=CA2 PE=2 SV=1	AT4G25700.1	| Symbols: BETA-OHASE 1, B1, chy1, BCH1 | beta-hydroxylase 1 | chr4:13094142-13095866 REVERSE LENGTH=310	LOC_Os03g03370.1	protein|fatty acid hydroxylase, putative, expressed	IMGA|Medtr1g100070.2	Beta-carotene hydroxylase chr1 29105158-29106864 F EGN_Mt100125 20111014	GO:0006633|fatty acid biosynthetic process GO:0016119|carotene metabolic process GO:0016123|xanthophyll biosynthetic process GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0010291|carotene beta-ring hydroxylase activity GO:0016491|oxidoreductase activity	GO:0009507|chloroplast
pt2_00992	A	A1S	Potri.001G100100	Potri.001G100100(AS)	POPTR_0001s09780	sp|Q8LGD1|SP1L5_ARATH	Protein SPIRAL1-like 5 OS=Arabidopsis thaliana GN=SP1L5 PE=2 SV=1	AT4G23496.1	| Symbols: SP1L5 | SPIRAL1-like5 | chr4:12257914-12258297 REVERSE LENGTH=99	LOC_Os03g30430.1	protein|nitrilase-associated protein, putative, expressed	IMGA|Medtr5g045310.1	hypothetical protein chr5 19471059-19467979 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005886|plasma membrane
pt2_00993	A	A1S	Potri.001G100000	Potri.001G100000(AS)	POPTR_0001s09790	sp|A7PZL3|PGLR_VITVI	Probable polygalacturonase OS=Vitis vinifera GN=GSVIVT00026920001 PE=1 SV=1	AT4G23500.1	| Symbols: | Pectin lyase-like superfamily protein | chr4:12264640-12267074 FORWARD LENGTH=495	LOC_Os03g03350.1	protein|polygalacturonase, putative, expressed	IMGA|Medtr1g100060.1	hypothetical protein chr1 29104014-29100579 H EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0004650|polygalacturonase activity	GO:0005576|extracellular region GO:0005618|cell wall
pt2_00994	A	A1S	Potri.001G099900	Potri.001G099900(AS)	POPTR_0001s09800	sp|Q39025|MPK5_ARATH	Mitogen-activated protein kinase 5 OS=Arabidopsis thaliana GN=MPK5 PE=2 SV=2	AT4G11330.1	| Symbols: ATMPK5, MPK5 | MAP kinase 5 | chr4:6892143-6893845 FORWARD LENGTH=376	LOC_Os10g38950.1	protein|CGMC_MAPKCMGC_2_ERK.14 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed	IMGA|Medtr5g010030.1	Mitogen-activated protein kinase chr5 2369912-2371946 F EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0000302|response to reactive oxygen species GO:0000303|response to superoxide GO:0006468|protein phosphorylation GO:0006612|protein targeting to membrane GO:0006950|response to stress GO:0006970|response to osmotic stress GO:0006979|response to oxidative stress GO:0007165|signal transduction GO:0009409|response to cold GO:0009605|response to external stimulus GO:0009651|response to salt stress GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009743|response to carbohydrate stimulus GO:0009751|response to salicylic acid stimulus GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009864|induced systemic resistance, jasmonic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009873|ethylene mediated signaling pathway GO:0010120|camalexin biosynthetic process GO:0010224|response to UV-B GO:0010363|regulation of plant-type hypersensitive response GO:0010374|stomatal complex development GO:0016310|phosphorylation GO:0030968|endoplasmic reticulum unfolded protein response GO:0031348|negative regulation of defense response GO:0035556|intracellular signal transduction GO:0042542|response to hydrogen peroxide GO:0042742|defense response to bacterium GO:0043069|negative regulation of programmed cell death GO:0048364|root development GO:0048481|ovule development GO:0050832|defense response to fungus GO:0080136|priming of cellular response to stress GO:2000037|regulation of stomatal complex patterning GO:2000038|regulation of stomatal complex development	GO:0004672|protein kinase activity GO:0004707|MAP kinase activity GO:0005515|protein binding GO:0016301|kinase activity	GO:0005634|nucleus GO:0005802|trans-Golgi network GO:0009524|phragmoplast GO:0009574|preprophase band
pt2_00995	A	A2S	Potri.001G099800	Potri.001G099800(AS) Potri.003G132000(DS)	POPTR_0001s09810	sp|Q8LPH6|MYB86_ARATH	Transcription factor MYB86 OS=Arabidopsis thaliana GN=MYB86 PE=2 SV=1	AT1G63910.1	| Symbols: AtMYB103, MYB103 | myb domain protein 103 | chr1:23719968-23721625 REVERSE LENGTH=370	LOC_Os08g05520.1	protein|myb-like DNA-binding domain containing protein, putative, expressed	IMGA|Medtr5g010020.2	40S ribosomal protein S10-like protein chr5 2353539-2367303 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0045893|positive regulation of transcription, DNA-dependent GO:1901430|positive regulation of syringal lignin biosynthetic process GO:2000652|regulation of secondary cell wall biogenesis	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_00996	A	A1S	Potri.001G099700	Potri.001G099700(AS)	POPTR_0001s09820	NA	NA	AT1G63930.1	| Symbols: ROH1 | from the Czech 'roh' meaning 'corner' | chr1:23727927-23729174 FORWARD LENGTH=415	LOC_Os12g06780.1	protein|expressed protein	IMGA|contig_77945_1.1	Exocyst subunit Exo70-interacting protein Roh1 contig_77945 334-1767 F PREDN 20111014	GO:0009827|plant-type cell wall modification GO:0009860|pollen tube growth GO:0010214|seed coat development GO:0048354|mucilage biosynthetic process involved in seed coat development	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_00997	A	A1S	Potri.001G099600	Potri.001G099600(AS)	POPTR_0001s09830	sp|P92947|MDARP_ARATH	Monodehydroascorbate reductase, chloroplastic OS=Arabidopsis thaliana GN=At1g63940 PE=2 SV=3	AT1G63940.2	| Symbols: MDAR6 | monodehydroascorbate reductase 6 | chr1:23730095-23733534 FORWARD LENGTH=493	LOC_Os08g05570.4	protein|monodehydroascorbate reductase, putative, expressed	IMGA|contig_53972_1.1	Monodehydroascorbate reductase contig_53972 3297-41 F PREDN 20111014	GO:0009409|response to cold GO:0042744|hydrogen peroxide catabolic process GO:0046686|response to cadmium ion GO:0055114|oxidation-reduction process	GO:0005524|ATP binding GO:0009055|electron carrier activity GO:0016491|oxidoreductase activity GO:0050660|flavin adenine dinucleotide binding	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0010319|stromule
pt2_00998	A	A1S	Potri.001G099500	Potri.001G099500(AS)	POPTR_0001s09840	NA	NA	AT1G01490.2	| Symbols: | Heavy metal transport/detoxification superfamily protein | chr1:180401-182066 REVERSE LENGTH=177	LOC_Os10g38870.1	protein|heavy metal-associated domain containing protein, expressed	IMGA|Medtr1g099800.1	hypothetical protein chr1 28995539-28994338 F EGN_Mt100125 20111014	GO:0030001|metal ion transport	GO:0046872|metal ion binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_00999	A	A1S	Potri.001G099400	Potri.001G099400(AS)	POPTR_0001s09850	sp|P31531|1A1C_SOYBN	1-aminocyclopropane-1-carboxylate synthase OS=Glycine max GN=ACS1 PE=2 SV=1	AT4G11280.1	| Symbols: ACS6, ATACS6 | 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6 | chr4:6864168-6865922 FORWARD LENGTH=495	LOC_Os04g48850.1	protein|aminotransferase, classes I and II, domain containing protein, expressed	IMGA|Medtr5g015020.1	1-aminocyclopropane-1-carboxylate synthase chr5 4879142-4877065 E EGN_Mt100125 20111014	GO:0006979|response to oxidative stress GO:0009058|biosynthetic process GO:0009605|response to external stimulus GO:0009611|response to wounding GO:0009612|response to mechanical stimulus GO:0009693|ethylene biosynthetic process GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009753|response to jasmonic acid stimulus GO:0010200|response to chitin GO:0042218|1-aminocyclopropane-1-carboxylate biosynthetic process GO:0071281|cellular response to iron ion	GO:0003824|catalytic activity GO:0005515|protein binding GO:0016740|transferase activity GO:0016847|1-aminocyclopropane-1-carboxylate synthase activity GO:0030170|pyridoxal phosphate binding GO:0042802|identical protein binding	GO:0005737|cytoplasm
pt2_01000	A	A2S	Potri.001G099300	Potri.001G099300(AS) Potri.003G132400(DS)	POPTR_0001s09860	sp|Q9CAK8|ISPF_ARATH	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic OS=Arabidopsis thaliana GN=ISPF PE=1 SV=1	AT1G63970.1	| Symbols: ISPF, MECPS | isoprenoid F | chr1:23738923-23740336 REVERSE LENGTH=231	LOC_Os02g45660.1	protein|2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplast precursor, putative, expressed	IMGA|Medtr5g010010.1	2-C-methyl-D-erythritol 2 4-cyclodiphosphate synthase chr5 2339269-2343000 F EGN_Mt100125 20111014	GO:0006098|pentose-phosphate shunt GO:0006364|rRNA processing GO:0006636|unsaturated fatty acid biosynthetic process GO:0006655|phosphatidylglycerol biosynthetic process GO:0006744|ubiquinone biosynthetic process GO:0009073|aromatic amino acid family biosynthetic process GO:0009637|response to blue light GO:0009644|response to high light intensity GO:0009744|response to sucrose stimulus GO:0009965|leaf morphogenesis GO:0010027|thylakoid membrane organization GO:0010114|response to red light GO:0010155|regulation of proton transport GO:0010218|response to far red light GO:0015995|chlorophyll biosynthetic process GO:0016114|terpenoid biosynthetic process GO:0016117|carotenoid biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019344|cysteine biosynthetic process GO:0030154|cell differentiation GO:0045893|positive regulation of transcription, DNA-dependent	GO:0008685|2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_01001	A	A1S	Potri.001G099300	Potri.001G099300(AS)	POPTR_0001s09860	sp|Q9CAK8|ISPF_ARATH	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic OS=Arabidopsis thaliana GN=ISPF PE=1 SV=1	AT1G63970.1	| Symbols: ISPF, MECPS | isoprenoid F | chr1:23738923-23740336 REVERSE LENGTH=231	LOC_Os02g45660.1	protein|2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplast precursor, putative, expressed	IMGA|Medtr5g010010.1	2-C-methyl-D-erythritol 2 4-cyclodiphosphate synthase chr5 2339269-2343000 F EGN_Mt100125 20111014	GO:0006098|pentose-phosphate shunt GO:0006364|rRNA processing GO:0006636|unsaturated fatty acid biosynthetic process GO:0006655|phosphatidylglycerol biosynthetic process GO:0006744|ubiquinone biosynthetic process GO:0009073|aromatic amino acid family biosynthetic process GO:0009637|response to blue light GO:0009644|response to high light intensity GO:0009744|response to sucrose stimulus GO:0009965|leaf morphogenesis GO:0010027|thylakoid membrane organization GO:0010114|response to red light GO:0010155|regulation of proton transport GO:0010218|response to far red light GO:0015995|chlorophyll biosynthetic process GO:0016114|terpenoid biosynthetic process GO:0016117|carotenoid biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019344|cysteine biosynthetic process GO:0030154|cell differentiation GO:0045893|positive regulation of transcription, DNA-dependent	GO:0008685|2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_01002	A	A1S	Potri.001G099300	Potri.001G099300(AS)	POPTR_0001s09860	sp|Q9CAK8|ISPF_ARATH	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic OS=Arabidopsis thaliana GN=ISPF PE=1 SV=1	AT1G63970.1	| Symbols: ISPF, MECPS | isoprenoid F | chr1:23738923-23740336 REVERSE LENGTH=231	LOC_Os02g45660.1	protein|2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplast precursor, putative, expressed	IMGA|Medtr5g010010.1	2-C-methyl-D-erythritol 2 4-cyclodiphosphate synthase chr5 2339269-2343000 F EGN_Mt100125 20111014	GO:0006098|pentose-phosphate shunt GO:0006364|rRNA processing GO:0006636|unsaturated fatty acid biosynthetic process GO:0006655|phosphatidylglycerol biosynthetic process GO:0006744|ubiquinone biosynthetic process GO:0009073|aromatic amino acid family biosynthetic process GO:0009637|response to blue light GO:0009644|response to high light intensity GO:0009744|response to sucrose stimulus GO:0009965|leaf morphogenesis GO:0010027|thylakoid membrane organization GO:0010114|response to red light GO:0010155|regulation of proton transport GO:0010218|response to far red light GO:0015995|chlorophyll biosynthetic process GO:0016114|terpenoid biosynthetic process GO:0016117|carotenoid biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0019344|cysteine biosynthetic process GO:0030154|cell differentiation GO:0045893|positive regulation of transcription, DNA-dependent	GO:0008685|2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_01003	A	A1S	Potri.001G099200	Potri.001G099200(AS)	POPTR_0001s09870	NA	NA	AT5G41560.1	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin ligase, Det1/DDB1-complexing (InterPro:IPR018276); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:16621427-16622619 REVERSE LENGTH=101	LOC_Os03g03420.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_01004	A	A1S	Potri.001G099100	Potri.001G099100(AS)	POPTR_0001s09890	sp|Q9M4A1|SPO12_ARATH	Meiotic recombination protein SPO11-2 OS=Arabidopsis thaliana GN=SPO11-2 PE=1 SV=1	AT1G63990.1	| Symbols: SPO11-2 | sporulation 11-2 | chr1:23743323-23745351 REVERSE LENGTH=383	LOC_Os08g06050.1	protein|OsTOP6A2 - Topoisomerase 6 subunit A homolog 2, expressed	IMGA|Medtr5g009990.1	Meiotic recombination protein SPO11-2 chr5 2330859-2334488 H EGN_Mt100125 20111014	GO:0006259|DNA metabolic process GO:0006265|DNA topological change GO:0006302|double-strand break repair GO:0006312|mitotic recombination GO:0007062|sister chromatid cohesion GO:0007126|meiosis GO:0007129|synapsis GO:0007131|reciprocal meiotic recombination GO:0007155|cell adhesion GO:0009553|embryo sac development GO:0009555|pollen development GO:0010090|trichome morphogenesis GO:0010332|response to gamma radiation GO:0032204|regulation of telomere maintenance GO:0032504|multicellular organism reproduction GO:0033044|regulation of chromosome organization GO:0042138|meiotic DNA double-strand break formation GO:0043247|telomere maintenance in response to DNA damage GO:0045010|actin nucleation GO:0045132|meiotic chromosome segregation GO:0048316|seed development GO:0048765|root hair cell differentiation GO:0051026|chiasma assembly GO:0071555|cell wall organization	GO:0003677|DNA binding GO:0003824|catalytic activity GO:0003918|DNA topoisomerase (ATP-hydrolyzing) activity GO:0005524|ATP binding	GO:0005634|nucleus GO:0005694|chromosome
pt2_01005	A	A1S	Potri.001G099000	Potri.001G099000(AS)	POPTR_0001s09900	sp|Q9FLX8|WRK27_ARATH	Probable WRKY transcription factor 27 OS=Arabidopsis thaliana GN=WRKY27 PE=2 SV=1	AT5G52830.1	| Symbols: WRKY27, ATWRKY27 | WRKY DNA-binding protein 27 | chr5:21410996-21412218 FORWARD LENGTH=348	LOC_Os02g16540.1	protein|WRKY39, expressed	IMGA|Medtr1g009380.1	WRKY transcription factor chr1 1920992-1923320 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0007263|nitric oxide mediated signal transduction GO:0009739|response to gibberellin stimulus GO:0042742|defense response to bacterium GO:0045892|negative regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_01006	A	A1S	Potri.001G098800	Potri.001G098800(AS)	POPTR_0001s09910	sp|P22503|GUN_PHAVU	Endoglucanase OS=Phaseolus vulgaris PE=2 SV=2	AT4G09740.1	| Symbols: AtGH9B14, GH9B14 | glycosyl hydrolase 9B14 | chr4:6142706-6145003 REVERSE LENGTH=478	LOC_Os08g29770.1	protein|endoglucanase, putative, expressed	IMGA|Medtr5g009970.1	Endo-1 4-beta-glucanase chr5 2324879-2327935 F EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0005576|extracellular region
pt2_01007	A	A1S	Potri.001G098700	Potri.001G098700(AS)	POPTR_0001s09920	NA	NA	AT4G11270.1	| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr4:6854461-6859490 FORWARD LENGTH=1446	LOC_Os06g22550.1	protein|transducin family protein, putative, expressed	NA	NA	GO:0006486|protein glycosylation GO:0008150|biological_process	GO:0000166|nucleotide binding	GO:0005829|cytosol
pt2_01008	A	A1S	Potri.001G098600	Potri.001G098600(AS)	POPTR_0001s09930	sp|P48488|PP1_MEDSV	Serine/threonine-protein phosphatase PP1 OS=Medicago sativa subsp. varia GN=PP1 PE=2 SV=1	AT4G11240.1	| Symbols: TOPP7 | Calcineurin-like metallo-phosphoesterase superfamily protein | chr4:6847333-6849032 FORWARD LENGTH=322	LOC_Os06g06880.1	protein|Ser/Thr protein phosphatase family protein, putative, expressed	IMGA|Medtr1g079950.1	Serine/threonine protein phosphatase PP1 chr1 20043884-20051001 F EGN_Mt100125 20111014	GO:0006470|protein dephosphorylation GO:0051604|protein maturation	GO:0004722|protein serine/threonine phosphatase activity GO:0016787|hydrolase activity	GO:0000164|protein phosphatase type 1 complex GO:0005575|cellular_component GO:0005634|nucleus GO:0005730|nucleolus GO:0005737|cytoplasm
pt2_01009	A	A1S	Potri.001G098600	Potri.001G098600(AS)	POPTR_0001s09930	sp|P48488|PP1_MEDSV	Serine/threonine-protein phosphatase PP1 OS=Medicago sativa subsp. varia GN=PP1 PE=2 SV=1	AT4G11240.1	| Symbols: TOPP7 | Calcineurin-like metallo-phosphoesterase superfamily protein | chr4:6847333-6849032 FORWARD LENGTH=322	LOC_Os06g06880.1	protein|Ser/Thr protein phosphatase family protein, putative, expressed	IMGA|Medtr1g079950.1	Serine/threonine protein phosphatase PP1 chr1 20043884-20051001 F EGN_Mt100125 20111014	GO:0006470|protein dephosphorylation GO:0051604|protein maturation	GO:0004722|protein serine/threonine phosphatase activity GO:0016787|hydrolase activity	GO:0000164|protein phosphatase type 1 complex GO:0005575|cellular_component GO:0005634|nucleus GO:0005730|nucleolus GO:0005737|cytoplasm
pt2_01010	A	A1S	Potri.001G098500	Potri.001G098500(AS)	POPTR_0001s09950	NA	NA	AT1G64050.2	| Symbols: | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. | chr1:23762584-23765714 FORWARD LENGTH=666	LOC_Os02g16600.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01011	A	A1S	Potri.001G098400	Potri.001G098400(AS)	POPTR_0001s09960	sp|A0MFL4|LOR17_ARATH	Protein LURP-one-related 17 OS=Arabidopsis thaliana GN=At5g41590 PE=2 SV=2	AT5G41590.1	| Symbols: | Protein of unknown function (DUF567) | chr5:16632221-16633896 REVERSE LENGTH=221	LOC_Os05g40630.1	protein|DUF567 domain containing protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_01012	A	A1S	Potri.001G098300	Potri.001G098300(AS)	POPTR_0001s09970	sp|Q948U0|RBOHA_SOLTU	Respiratory burst oxidase homolog protein A OS=Solanum tuberosum GN=RBOHA PE=1 SV=1	AT1G64060.1	| Symbols: ATRBOH F, ATRBOHF, RBOHAP108, RBOHF, RBOH F | respiratory burst oxidase protein F | chr1:23770266-23776317 FORWARD LENGTH=944	LOC_Os05g45210.3	protein|respiratory burst oxidase, putative, expressed	IMGA|contig_76663_1.1	Respiratory burst oxidase protein F contig_76663 746-1988 E PREDN 20111014	GO:0000165|MAPK cascade GO:0002679|respiratory burst involved in defense response GO:0006612|protein targeting to membrane GO:0006952|defense response GO:0007165|signal transduction GO:0007231|osmosensory signaling pathway GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009605|response to external stimulus GO:0009611|response to wounding GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009753|response to jasmonic acid stimulus GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009873|ethylene mediated signaling pathway GO:0010119|regulation of stomatal movement GO:0010228|vegetative to reproductive phase transition of meristem GO:0010363|regulation of plant-type hypersensitive response GO:0016926|protein desumoylation GO:0030968|endoplasmic reticulum unfolded protein response GO:0031348|negative regulation of defense response GO:0033500|carbohydrate homeostasis GO:0035556|intracellular signal transduction GO:0042538|hyperosmotic salinity response GO:0043069|negative regulation of programmed cell death GO:0050665|hydrogen peroxide biosynthetic process GO:0050832|defense response to fungus GO:0052542|defense response by callose deposition GO:0072593|reactive oxygen species metabolic process	GO:0004601|peroxidase activity GO:0005506|iron ion binding GO:0005509|calcium ion binding GO:0009055|electron carrier activity GO:0016174|NAD(P)H oxidase activity GO:0016491|oxidoreductase activity GO:0050660|flavin adenine dinucleotide binding GO:0050664|oxidoreductase activity, acting on NADH or NADPH, oxygen as acceptor	GO:0005886|plasma membrane GO:0005887|integral to plasma membrane
pt2_01013	A	A1S	Potri.001G098200	Potri.001G098200(AS)	POPTR_0001s09980	NA	NA	AT1G64065.1	| Symbols: | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | chr1:23778628-23779272 FORWARD LENGTH=214	LOC_Os01g53470.1	protein|harpin-induced protein 1 domain containing protein, expressed	IMGA|Medtr5g009910.1	hypothetical protein chr5 2291145-2290576 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0016020|membrane
pt2_01014	A	A1S	Potri.001G098100	Potri.001G098100(AS)	POPTR_0001s09990	NA	NA	AT2G46150.1	| Symbols: | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | chr2:18961424-18962089 FORWARD LENGTH=221	LOC_Os05g45070.1	protein|harpin-induced protein 1 domain containing protein, expressed	IMGA|Medtr5g009910.1	hypothetical protein chr5 2291145-2290576 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005886|plasma membrane
pt2_01015	A	A1S	Potri.001G098000	Potri.001G098000(AS)	POPTR_0001s10000	sp|Q9SH58|MAKR2_ARATH	Probable membrane-associated kinase regulator 2 OS=Arabidopsis thaliana GN=MAKR2 PE=2 SV=1	AT1G64080.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52870.1); Has 1546 Blast hits to 738 proteins in 176 species: Archae - 0; Bacteria - 143; Metazoa - 278; Fungi - 131; Plants - 95; Viruses - 4; Other Eukaryotes - 895 (source: NCBI BLink). | chr1:23785230-23786557 REVERSE LENGTH=411	LOC_Os01g12640.1	protein|expressed protein	IMGA|Medtr5g009870.1	hypothetical protein chr5 2264460-2266139 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_01016	G	G2	NA	NA	POPTR_0001s10010	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01017	A	A2S	Potri.001G097900	Potri.001G097900(AS) Potri.T144300(BS)	POPTR_0001s10020	sp|P23548|GUN_PAEPO	Endoglucanase OS=Paenibacillus polymyxa PE=3 SV=2	AT1G13130.1	| Symbols: | Cellulase (glycosyl hydrolase family 5) protein | chr1:4474726-4477820 FORWARD LENGTH=552	LOC_Os04g40510.2	protein|glycosyl hydrolase family 5 protein, putative, expressed	IMGA|Medtr5g088330.1	Oligoribonuclease chr5 37283827-37298839 E EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0043169|cation binding	GO:0009507|chloroplast
pt2_01018	A	A2S	Potri.T144400	Potri.T144400(AS) Potri.001G097800(BS)	POPTR_0001s10030	sp|Q2G6G9|RL25_NOVAD	50S ribosomal protein L25 OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=rplY PE=3 SV=1	AT4G23620.1	| Symbols: | Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain | chr4:12315016-12316659 REVERSE LENGTH=264	LOC_Os01g41030.1	protein|ribosomal protein L25, putative, expressed	NA	NA	GO:0006412|translation GO:0006783|heme biosynthetic process	GO:0003735|structural constituent of ribosome GO:0008097|5S rRNA binding GO:0008270|zinc ion binding GO:0050897|cobalt ion binding	GO:0005622|intracellular GO:0005840|ribosome GO:0009507|chloroplast
pt2_01019	A	A1S	Potri.001G097700	Potri.001G097700(AS)	POPTR_0001s10040	sp|Q9SUR3|RTNLA_ARATH	Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1	AT4G23630.1	| Symbols: BTI1, RTNLB1 | VIRB2-interacting protein 1 | chr4:12318070-12319574 FORWARD LENGTH=275	LOC_Os05g45050.1	protein|reticulon domain containing protein, putative, expressed	IMGA|Medtr5g090340.3	Reticulon-like protein B8 chr5 38304798-38301150 F EGN_Mt100125 20111014	GO:0010286|heat acclimation GO:0071786|endoplasmic reticulum tubular network organization	NA	GO:0005634|nucleus GO:0005783|endoplasmic reticulum GO:0005789|endoplasmic reticulum membrane GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0071458|integral to cytosolic side of endoplasmic reticulum membrane GO:0071782|endoplasmic reticulum tubular network
pt2_01020	A	A1S	Potri.001G097600	Potri.001G097600(AS)	POPTR_0001s10050	sp|Q9P7J5|YJNA_SCHPO	Uncharacterized AAA domain-containing protein C24B10.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC24B10.10c PE=2 SV=1	AT1G64110.3	| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:23796887-23801255 REVERSE LENGTH=827	LOC_Os01g12660.1	protein|AAA-type ATPase family protein, putative, expressed	IMGA|Medtr5g009840.1	Spastin chr5 2248882-2254570 H EGN_Mt100125 20111014	GO:0048235|pollen sperm cell differentiation	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity	GO:0005886|plasma membrane
pt2_01021	A	A1S	Potri.001G097500	Potri.001G097500(AS)	POPTR_0001s10060	NA	NA	AT5G60750.1	| Symbols: | CAAX amino terminal protease family protein | chr5:24431072-24433199 FORWARD LENGTH=347	LOC_Os06g30910.1	protein|CAAX amino terminal protease family protein, putative, expressed	NA	NA	GO:0006508|proteolysis GO:0006569|tryptophan catabolic process GO:0009684|indoleacetic acid biosynthetic process	GO:0004175|endopeptidase activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_01022	A	A1S	Potri.001G097400	Potri.001G097400(AS)	POPTR_0001s10070	sp|Q42479|CDPK3_ARATH	Calcium-dependent protein kinase 3 OS=Arabidopsis thaliana GN=CPK3 PE=1 SV=1	AT4G23650.1	| Symbols: CDPK6, CPK3 | calcium-dependent protein kinase 6 | chr4:12324967-12327415 REVERSE LENGTH=529	LOC_Os01g43410.1	protein|CAMK_CAMK_like.9 - CAMK includes calcium/calmodulin depedent protein kinases, expressed	IMGA|Medtr5g009830.1	Calcium dependent protein kinase chr5 2241283-2246294 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006499|N-terminal protein myristoylation GO:0006970|response to osmotic stress GO:0009651|response to salt stress GO:0009738|abscisic acid mediated signaling pathway GO:0010119|regulation of stomatal movement GO:0010359|regulation of anion channel activity GO:0032880|regulation of protein localization GO:0046686|response to cadmium ion GO:0046777|protein autophosphorylation GO:0051049|regulation of transport	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004683|calmodulin-dependent protein kinase activity GO:0005509|calcium ion binding GO:0005515|protein binding GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005773|vacuole GO:0005829|cytosol GO:0005886|plasma membrane GO:0009507|chloroplast GO:0016020|membrane
pt2_01023	A	A1S	Potri.001G097300	Potri.001G097300(AS)	POPTR_0001s10080	sp|Q9LS46|ALMT9_ARATH	Aluminum-activated malate transporter 9 OS=Arabidopsis thaliana GN=ALMT9 PE=2 SV=1	AT3G18440.1	| Symbols: AtALMT9, ALMT9 | aluminum-activated malate transporter 9 | chr3:6328181-6330652 FORWARD LENGTH=598	LOC_Os01g12210.1	protein|aluminum-activated malate transporter, putative, expressed	IMGA|Medtr5g014310.1	hypothetical protein chr5 4526352-4523171 H EGN_Mt100125 20111014	GO:0010044|response to aluminum ion GO:0015743|malate transport	GO:0005253|anion channel activity	GO:0009705|plant-type vacuole membrane
pt2_01024	A	A1S	Potri.001G097200	Potri.001G097200(AS)	POPTR_0001s10090	sp|Q9SZ67|WRK19_ARATH	Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1	AT1G64140.1	| Symbols: | BEST Arabidopsis thaliana protein match is: loricrin-related (TAIR:AT5G64550.1); Has 3596 Blast hits to 2004 proteins in 150 species: Archae - 0; Bacteria - 54; Metazoa - 1597; Fungi - 38; Plants - 513; Viruses - 9; Other Eukaryotes - 1385 (source: NCBI BLink). | chr1:23804069-23806009 REVERSE LENGTH=646	LOC_Os01g43372.1	protein|expressed protein	IMGA|contig_83807_1.1	Unknown protein contig_83807 2620-1 E PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_01025	A	A1S	Potri.001G097100	Potri.001G097100(AS)	POPTR_0001s10100	NA	NA	NA	NA	NA	NA	NA	NA	GO:0042631|cellular response to water deprivation	NA	GO:0009507|chloroplast GO:0016020|membrane
pt2_01026	A	A1S	Potri.001G097000	Potri.001G097000(AS)	POPTR_0001s10110	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01027	A	A1S	Potri.001G096900	Potri.001G096900(AS)	POPTR_0001s10120	sp|P13240|DR206_PEA	Disease resistance response protein 206 OS=Pisum sativum GN=PI206 PE=2 SV=2	AT4G23690.1	| Symbols: | Disease resistance-responsive (dirigent-like protein) family protein | chr4:12339152-12339715 REVERSE LENGTH=187	LOC_Os07g44930.1	protein|dirigent, putative, expressed	NA	NA	GO:0006084|acetyl-CoA metabolic process GO:0006952|defense response GO:0009807|lignan biosynthetic process GO:0016126|sterol biosynthetic process GO:0016132|brassinosteroid biosynthetic process GO:0050790|regulation of catalytic activity GO:1901599|(-)-pinoresinol biosynthetic process	GO:0042349|guiding stereospecific synthesis activity	GO:0005576|extracellular region
pt2_01028	A	A3S	Potri.001G096800	Potri.001G096800(AS) Potri.003G134600(DS) Potri.001G096600(DS)	POPTR_0001s10130	sp|P13240|DR206_PEA	Disease resistance response protein 206 OS=Pisum sativum GN=PI206 PE=2 SV=2	AT1G64160.1	| Symbols: | Disease resistance-responsive (dirigent-like protein) family protein | chr1:23814063-23814611 FORWARD LENGTH=182	LOC_Os07g44250.1	protein|dirigent, putative, expressed	NA	NA	GO:0006952|defense response GO:0009807|lignan biosynthetic process GO:1901599|(-)-pinoresinol biosynthetic process	GO:0042349|guiding stereospecific synthesis activity	GO:0005576|extracellular region
pt2_01029	C	C1S	Potri.001G096700	Potri.001G096700(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01030	A	A2S	Potri.001G096600	Potri.001G096600(AS) Potri.001G096800(DS)	POPTR_0001s10150	sp|P13240|DR206_PEA	Disease resistance response protein 206 OS=Pisum sativum GN=PI206 PE=2 SV=2	AT1G64160.1	| Symbols: | Disease resistance-responsive (dirigent-like protein) family protein | chr1:23814063-23814611 FORWARD LENGTH=182	LOC_Os07g44280.1	protein|dirigent, putative, expressed	NA	NA	GO:0006952|defense response GO:0009807|lignan biosynthetic process GO:1901599|(-)-pinoresinol biosynthetic process	GO:0042349|guiding stereospecific synthesis activity	GO:0005576|extracellular region
pt2_01031	A	A1S	Potri.001G096500	Potri.001G096500(AS)	POPTR_0001s10160	sp|P13240|DR206_PEA	Disease resistance response protein 206 OS=Pisum sativum GN=PI206 PE=2 SV=2	AT1G64160.1	| Symbols: | Disease resistance-responsive (dirigent-like protein) family protein | chr1:23814063-23814611 FORWARD LENGTH=182	LOC_Os07g44930.1	protein|dirigent, putative, expressed	NA	NA	GO:0006952|defense response GO:0009807|lignan biosynthetic process GO:1901599|(-)-pinoresinol biosynthetic process	GO:0042349|guiding stereospecific synthesis activity	GO:0005576|extracellular region
pt2_01032	G	G1	NA	NA	POPTR_0001s10165	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01033	A	A1S	Potri.001G096400	Potri.001G096400(AS)	POPTR_0001s10170	sp|Q9FFR9|CHX18_ARATH	Cation/H(+) antiporter 18 OS=Arabidopsis thaliana GN=CHX18 PE=2 SV=1	AT5G41610.1	| Symbols: ATCHX18, CHX18 | cation/H+ exchanger 18 | chr5:16638554-16641146 REVERSE LENGTH=810	LOC_Os05g19500.1	protein|ATCHX, putative, expressed	IMGA|Medtr5g009770.1	Na+/H+ antiporter-like protein chr5 2205905-2209473 E EGN_Mt100125 20111014	GO:0006812|cation transport GO:0006885|regulation of pH GO:0035725|sodium ion transmembrane transport GO:0055085|transmembrane transport	GO:0005451|monovalent cation:hydrogen antiporter activity GO:0015299|solute:hydrogen antiporter activity GO:0015385|sodium:hydrogen antiporter activity	GO:0005770|late endosome GO:0009507|chloroplast GO:0016021|integral to membrane
pt2_01034	A	A1S	Potri.001G096200	Potri.001G096200(AS)	POPTR_0001s10180	sp|Q66GQ2|Y5162_ARATH	Uncharacterized protein At5g41620 OS=Arabidopsis thaliana GN=At5g41620 PE=1 SV=2	AT5G41620.1	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: intracellular protein transport protein USO1-related (TAIR:AT1G64180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:16646330-16648776 FORWARD LENGTH=623	LOC_Os06g31190.1	protein|intracellular protein transport protein USO1-related, putative, expressed	IMGA|Medtr5g009750.1	hypothetical protein chr5 2200925-2197271 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005737|cytoplasm GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_01035	A	A1S	Potri.001G096100	Potri.001G096100(AS)	POPTR_0001s10190	sp|Q9FPW6|POB1_ARATH	BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana GN=POB1 PE=2 SV=2	AT3G61600.2	| Symbols: ATPOB1, POB1 | POZ/BTB containin G-protein 1 | chr3:22795704-22798069 FORWARD LENGTH=561	LOC_Os06g31100.1	protein|E1-BTB2 - Bric-a-Brac, Tramtrack, and Broad Complex domain with E1 subfamily conserved sequence, expressed	NA	NA	GO:0009954|proximal/distal pattern formation GO:0010114|response to red light GO:0010227|floral organ abscission GO:0048439|flower morphogenesis	GO:0005515|protein binding GO:0042803|protein homodimerization activity GO:0046982|protein heterodimerization activity	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_01036	A	A1S	Potri.001G096000	Potri.001G096000(AS)	POPTR_0001s10200	NA	NA	AT4G23720.1	| Symbols: | Protein of unknown function (DUF1191) | chr4:12358707-12359648 FORWARD LENGTH=313	LOC_Os12g02550.1	protein|expressed protein	IMGA|Medtr5g075750.1	hypothetical protein chr5 31232635-31231727 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005886|plasma membrane
pt2_01037	A	A1S	Potri.001G095900	Potri.001G095900(AS)	POPTR_0001s10210	sp|Q9ZP55|DRP4C_ARATH	Dynamin-related protein 4C OS=Arabidopsis thaliana GN=DRP4C PE=2 SV=1	AT1G60500.1	| Symbols: DRP4C | Dynamin related protein 4C | chr1:22291582-22293822 FORWARD LENGTH=669	LOC_Os03g15420.1	protein|dynamin family protein, putative, expressed	IMGA|Medtr5g009150.1	Dynamin-related protein 1A chr5 1886432-1881144 H EGN_Mt100125 20111014	NA	GO:0003924|GTPase activity GO:0005525|GTP binding	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_01038	A	A2S	Potri.001G095800	Potri.001G095800(AS) Potri.003G135600(DS)	POPTR_0001s10220	sp|P21577|6PGD_SYNE7	6-phosphogluconate dehydrogenase, decarboxylating OS=Synechococcus elongatus (strain PCC 7942) GN=gnd PE=1 SV=4	AT5G41670.2	| Symbols: | 6-phosphogluconate dehydrogenase family protein | chr5:16665647-16667110 REVERSE LENGTH=487	LOC_Os11g29400.1	protein|6-phosphogluconate dehydrogenase, decarboxylating, putative, expressed	IMGA|contig_75082_1.1	6-phosphogluconate dehydrogenase decarboxylating contig_75082 2874-966 F PREDN 20111014	GO:0006098|pentose-phosphate shunt GO:0009744|response to sucrose stimulus GO:0009749|response to glucose stimulus GO:0009750|response to fructose stimulus GO:0046686|response to cadmium ion GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0004616|phosphogluconate dehydrogenase (decarboxylating) activity GO:0016491|oxidoreductase activity GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0050661|NADP binding GO:0050662|coenzyme binding	GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0005829|cytosol GO:0009506|plasmodesma GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_01039	A	A2S	Potri.001G095700	Potri.001G095700(AS) Potri.001G095600(DS)	POPTR_0001s10230	sp|Q9LYS2|AB10C_ARATH	ABC transporter C family member 10 OS=Arabidopsis thaliana GN=ABCC10 PE=2 SV=2	AT3G59140.1	| Symbols: ATMRP14, MRP14, ABCC10 | multidrug resistance-associated protein 14 | chr3:21863519-21868701 REVERSE LENGTH=1453	LOC_Os06g06440.1	protein|ABC transporter, ATP-binding protein, putative, expressed	IMGA|contig_107110_1.1	Multidrug resistance protein ABC transporter family contig_107110 1-491 H PREDN 20111014	GO:0006810|transport GO:0055085|transmembrane transport	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0005774|vacuolar membrane GO:0005886|plasma membrane GO:0016021|integral to membrane
pt2_01040	A	A1S	Potri.001G095600	Potri.001G095600(AS)	POPTR_0001s10240	sp|Q9LYS2|AB10C_ARATH	ABC transporter C family member 10 OS=Arabidopsis thaliana GN=ABCC10 PE=2 SV=2	AT3G59140.1	| Symbols: ATMRP14, MRP14, ABCC10 | multidrug resistance-associated protein 14 | chr3:21863519-21868701 REVERSE LENGTH=1453	LOC_Os06g06440.1	protein|ABC transporter, ATP-binding protein, putative, expressed	IMGA|Medtr5g033030.1	Multidrug resistance protein ABC transporter family chr5 13816774-13810624 H EGN_Mt100125 20111014	GO:0006810|transport GO:0055085|transmembrane transport	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0005774|vacuolar membrane GO:0005886|plasma membrane GO:0016021|integral to membrane
pt2_01041	A	A1S	Potri.001G095500	Potri.001G095500(AS)	POPTR_0001s10250	sp|A9HF18|IF2_GLUDA	Translation initiation factor IF-2 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=infB PE=3 SV=1	AT4G11160.1	| Symbols: | Translation initiation factor 2, small GTP-binding protein | chr4:6803846-6806726 FORWARD LENGTH=743	LOC_Os09g34010.1	protein|expressed protein	IMGA|Medtr5g032140.1	Translation initiation factor IF-2 chr5 13379160-13374048 E EGN_Mt100125 20111014	GO:0006413|translational initiation GO:0009165|nucleotide biosynthetic process GO:0009887|organ morphogenesis GO:0009888|tissue development GO:0010228|vegetative to reproductive phase transition of meristem GO:0010638|positive regulation of organelle organization GO:0016926|protein desumoylation GO:0033044|regulation of chromosome organization GO:0050665|hydrogen peroxide biosynthetic process	GO:0003743|translation initiation factor activity GO:0003924|GTPase activity GO:0005525|GTP binding	GO:0005622|intracellular
pt2_01042	G	G1	NA	NA	POPTR_0001s10260	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01043	A	A1S	Potri.001G095300	Potri.001G095300(AS)	POPTR_0001s10270	sp|Q40784|AAPC_CENCI	Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris PE=2 SV=1	AT3G61610.1	| Symbols: | Galactose mutarotase-like superfamily protein | chr3:22799480-22801029 FORWARD LENGTH=317	LOC_Os05g49430.1	protein|aldose 1-epimerase, putative, expressed	IMGA|Medtr5g009670.1	Apospory-associated protein C chr5 2153652-2151588 F EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0006012|galactose metabolic process GO:0006499|N-terminal protein myristoylation	GO:0003824|catalytic activity GO:0004034|aldose 1-epimerase activity GO:0016853|isomerase activity GO:0030246|carbohydrate binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01044	A	A1S	Potri.001G095200	Potri.001G095200(AS)	POPTR_0001s10280	sp|Q9SUQ3|Y4374_ARATH	Probable inactive receptor kinase At4g23740 OS=Arabidopsis thaliana GN=At4g23740 PE=1 SV=1	AT4G23740.1	| Symbols: | Leucine-rich repeat protein kinase family protein | chr4:12367063-12369159 FORWARD LENGTH=638	LOC_Os01g12390.1	protein|inactive receptor kinase At2g26730 precursor, putative, expressed	IMGA|contig_49154_1.1	Receptor kinase contig_49154 3957-1323 E PREDN 20111014	GO:0006468|protein phosphorylation GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway GO:0010075|regulation of meristem growth	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_01045	A	A2S	Potri.001G094900	Potri.001G094900(AS) Potri.003G136200(DS)	POPTR_0001s10290	sp|P35135|UBC4_SOLLC	Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1	AT1G64230.2	| Symbols: UBC28 | ubiquitin-conjugating enzyme 28 | chr1:23833792-23835220 FORWARD LENGTH=148	LOC_Os02g16040.1	protein|ubiquitin-conjugating enzyme, putative, expressed	IMGA|Medtr5g075580.1	Ubiquitin carrier protein chr5 31157779-31152864 E EGN_Mt100125 20111014	GO:0006301|postreplication repair GO:0006511|ubiquitin-dependent protein catabolic process GO:0006635|fatty acid beta-oxidation GO:0006944|cellular membrane fusion GO:0016558|protein import into peroxisome matrix GO:0042023|DNA endoreduplication GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0043248|proteasome assembly GO:0044265|cellular macromolecule catabolic process GO:0048193|Golgi vesicle transport GO:0051510|regulation of unidimensional cell growth GO:0051788|response to misfolded protein	GO:0004842|ubiquitin-protein ligase activity GO:0016881|acid-amino acid ligase activity	GO:0005737|cytoplasm GO:0005886|plasma membrane
pt2_01046	A	A2S	Potri.001G094800	Potri.001G094800(AS) Potri.003G136300(DS)	POPTR_0001s10300	sp|Q9SUQ2|CRF2_ARATH	Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE=1 SV=1	AT4G23750.2	| Symbols: CRF2, TMO3 | cytokinin response factor 2 | chr4:12376751-12377782 FORWARD LENGTH=343	LOC_Os01g46870.1	protein|AP2 domain containing protein, expressed	IMGA|Medtr5g009620.1	Ethylene-responsive transcription factor RAP2-6 chr5 2125011-2123721 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006606|protein import into nucleus GO:0042991|transcription factor import into nucleus GO:0048364|root development GO:0048825|cotyledon development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0042802|identical protein binding	GO:0005634|nucleus
pt2_01047	A	A1S	Potri.001G094700	Potri.001G094700(AS)	POPTR_0001s10310	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process GO:0009612|response to mechanical stimulus	NA	GO:0005886|plasma membrane GO:0031225|anchored to membrane
pt2_01048	A	A1S	Potri.001G094600	Potri.001G094600(AS)	POPTR_0001s10320	sp|Q8LGE9|CSTR1_ARATH	CMP-sialic acid transporter 1 OS=Arabidopsis thaliana GN=At5g41760 PE=2 SV=1	AT5G41760.2	| Symbols: | Nucleotide-sugar transporter family protein | chr5:16706978-16709204 FORWARD LENGTH=340	LOC_Os06g33210.1	protein|UAA transporter family domain containing protein, expressed	IMGA|Medtr5g099280.1	UDP-N-acetylglucosamine transporter chr5 42487897-42492640 F EGN_Mt100125 20111014	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0009086|methionine biosynthetic process GO:0015739|sialic acid transport GO:0015780|nucleotide-sugar transport GO:0055085|transmembrane transport	GO:0005338|nucleotide-sugar transmembrane transporter activity GO:0005351|sugar:hydrogen symporter activity GO:0005456|CMP-N-acetylneuraminate transmembrane transporter activity GO:0015136|sialic acid transmembrane transporter activity	GO:0000139|Golgi membrane GO:0009507|chloroplast GO:0016021|integral to membrane
pt2_01049	A	A1S	Potri.001G094500	Potri.001G094500(AS)	POPTR_0001s10330	sp|Q9T014|SPA2_ARATH	Protein SPA1-RELATED 2 OS=Arabidopsis thaliana GN=SPA2 PE=1 SV=2	AT4G11110.1	| Symbols: SPA2 | SPA1-related 2 | chr4:6772163-6776675 FORWARD LENGTH=1036	LOC_Os05g49590.2	protein|suppressor of phythchrome A, putative, expressed	IMGA|Medtr5g009530.1	Histone acetyltransferase type B subunit chr5 2065539-2079439 H EGN_Mt100125 20111014	GO:0006281|DNA repair GO:0006468|protein phosphorylation GO:0010100|negative regulation of photomorphogenesis GO:0048608|reproductive structure development	GO:0004672|protein kinase activity GO:0004871|signal transducer activity GO:0005515|protein binding GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus GO:0005834|heterotrimeric G-protein complex GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_01050	A	A1S	Potri.001G094400	Potri.001G094400(AS)	POPTR_0001s10340	sp|P63155|CRNL1_RAT	Crooked neck-like protein 1 OS=Rattus norvegicus GN=Crnkl1 PE=2 SV=1	AT5G41770.1	| Symbols: | crooked neck protein, putative / cell cycle protein, putative | chr5:16718021-16720936 FORWARD LENGTH=705	LOC_Os05g22260.1	protein|crooked neck, putative, expressed	IMGA|Medtr5g009520.1	Pre-mRNA-splicing factor CLF1 chr5 2056724-2050572 E EGN_Mt100125 20111014	GO:0006396|RNA processing	NA	GO:0005622|intracellular GO:0005634|nucleus
pt2_01051	A	A1S	Potri.001G094300	Potri.001G094300(AS)	POPTR_0001s10350	NA	NA	AT1G64320.1	| Symbols: | myosin heavy chain-related | chr1:23869036-23870548 FORWARD LENGTH=476	NA	NA	NA	NA	GO:0009827|plant-type cell wall modification GO:0009860|pollen tube growth GO:0046686|response to cadmium ion	GO:0003674|molecular_function	NA
pt2_01052	C	C1S	Potri.001G094200	Potri.001G094200(CS)	NA	NA	AT5G41790.1	| Symbols: CIP1 | COP1-interactive protein 1 | chr5:16727530-16732391 FORWARD LENGTH=1586	NA	NA	NA	NA	GO:0042306|regulation of protein import into nucleus	GO:0005515|protein binding	GO:0005634|nucleus GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005856|cytoskeleton GO:0009507|chloroplast
pt2_01053	A	A1S	Potri.001G094100	Potri.001G094100(AS)	POPTR_0001s10370	sp|Q54MZ4|MCFB_DICDI	Mitochondrial substrate carrier family protein B OS=Dictyostelium discoideum GN=mcfB PE=3 SV=1	AT4G01100.1	| Symbols: ADNT1 | adenine nucleotide transporter 1 | chr4:477411-479590 FORWARD LENGTH=352	LOC_Os05g50840.1	protein|mitochondrial carrier protein, putative, expressed	IMGA|Medtr5g009500.1	Calcium-binding mitochondrial carrier protein SCaMC-1-B chr5 2040638-2043955 E EGN_Mt100125 20111014	GO:0006007|glucose catabolic process GO:0006096|glycolysis GO:0006098|pentose-phosphate shunt GO:0006810|transport GO:0006839|mitochondrial transport GO:0009060|aerobic respiration GO:0009651|response to salt stress GO:0015866|ADP transport GO:0015867|ATP transport GO:0046686|response to cadmium ion GO:0055085|transmembrane transport GO:0080121|AMP transport	GO:0005347|ATP transmembrane transporter activity GO:0015217|ADP transmembrane transporter activity GO:0080122|AMP transmembrane transporter activity	GO:0005739|mitochondrion GO:0005743|mitochondrial inner membrane GO:0005774|vacuolar membrane GO:0009536|plastid GO:0016020|membrane
pt2_01054	A	A1S	Potri.001G094000	Potri.001G094000(AS)	POPTR_0001s10380	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01055	A	A1S	Potri.001G093900	Potri.001G093900(AS)	POPTR_0001s10390	NA	NA	AT3G61670.1	| Symbols: | Protein of unknown function (DUF3133) | chr3:22819052-22821870 FORWARD LENGTH=790	LOC_Os02g15820.1	protein|extra-large G-protein-related, putative, expressed	IMGA|contig_74055_1.1	Extra-large G-protein-like protein contig_74055 261-4678 E PREDN 20111014	GO:0006346|methylation-dependent chromatin silencing GO:0007267|cell-cell signaling GO:0008150|biological_process GO:0009616|virus induced gene silencing GO:0010050|vegetative phase change GO:0010267|production of ta-siRNAs involved in RNA interference GO:0016246|RNA interference GO:0035196|production of miRNAs involved in gene silencing by miRNA	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_01056	A	A2S	Potri.001G093800	Potri.001G093800(AS) Potri.003G137800(DS)	POPTR_0001s10400	NA	NA	AT4G11090.1	| Symbols: TBL23 | TRICHOME BIREFRINGENCE-LIKE 23 | chr4:6764645-6766221 REVERSE LENGTH=432	LOC_Os05g12380.1	protein|expressed protein	IMGA|contig_53322_2.1	Leaf senescence protein-like protein contig_53322 4450-3428 H PREDN 20111014	GO:0008150|biological_process	NA	NA
pt2_01057	A	A1S	Potri.001G093700	Potri.001G093700(AS)	POPTR_0001s10410	sp|Q9T012|HMG13_ARATH	High mobility group B protein 13 OS=Arabidopsis thaliana GN=HMGB13 PE=2 SV=1	AT4G11080.1	| Symbols: | HMG (high mobility group) box protein | chr4:6760898-6763272 REVERSE LENGTH=446	LOC_Os02g15810.1	protein|HMG1/2, putative, expressed	NA	NA	NA	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0000793|condensed chromosome GO:0000794|condensed nuclear chromosome GO:0005634|nucleus
pt2_01058	A	A2S	Potri.001G093600	Potri.001G093600(AS) Potri.003G138100(DS)	POPTR_0001s10430	sp|Q9FKS8|LHT1_ARATH	Lysine histidine transporter 1 OS=Arabidopsis thaliana GN=LHT1 PE=1 SV=1	AT5G41800.1	| Symbols: | Transmembrane amino acid transporter family protein | chr5:16733842-16735888 FORWARD LENGTH=452	LOC_Os01g43320.1	protein|transmembrane amino acid transporter protein, putative, expressed	IMGA|Medtr5g081630.1	Proline transporter chr5 33955507-33967822 E EGN_Mt100125 20111014	GO:0006865|amino acid transport GO:0015824|proline transport	GO:0015171|amino acid transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_01059	A	A1S	Potri.001G093500	Potri.001G093500(AS)	POPTR_0001s10440	NA	NA	AT5G41810.2	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64340.1); Has 514 Blast hits to 437 proteins in 98 species: Archae - 0; Bacteria - 21; Metazoa - 115; Fungi - 53; Plants - 52; Viruses - 5; Other Eukaryotes - 268 (source: NCBI BLink). | chr5:16738302-16739474 FORWARD LENGTH=279	LOC_Os06g33390.1	protein|avr9/Cf-9 rapidly elicited protein 194, putative, expressed	IMGA|Medtr5g009490.1	hypothetical protein chr5 2036837-2036262 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01060	A	A1S	Potri.001G093400	Potri.001G093400(AS)	POPTR_0001s10450	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006626|protein targeting to mitochondrion GO:0006635|fatty acid beta-oxidation GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0043248|proteasome assembly GO:0051788|response to misfolded protein	GO:0000166|nucleotide binding GO:0005515|protein binding	GO:0005635|nuclear envelope GO:0005737|cytoplasm GO:0005834|heterotrimeric G-protein complex
pt2_01061	R	R	NA	NA	POPTR_0001s10460	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01062	A	A2S	Potri.001G093200	Potri.001G093200(AS) Potri.010G227200(DS)	POPTR_0001s10470	NA	NA	NA	NA	NA	NA	NA	NA	GO:0009851|auxin biosynthetic process GO:0009911|positive regulation of flower development GO:0010228|vegetative to reproductive phase transition of meristem GO:0010229|inflorescence development GO:0016575|histone deacetylation GO:0048825|cotyledon development GO:0055114|oxidation-reduction process	GO:0008131|primary amine oxidase activity GO:0016491|oxidoreductase activity	GO:0005739|mitochondrion
pt2_01063	B	B1S	Potri.001G093000	Potri.001G093000(BS)	POPTR_0001s10480	NA	NA	AT1G64355.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3593 (InterPro:IPR021995); Has 301 Blast hits to 301 proteins in 96 species: Archae - 0; Bacteria - 143; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). | chr1:23886152-23886987 FORWARD LENGTH=199	LOC_Os05g49650.1	protein|expressed protein	NA	NA	GO:0008150|biological_process GO:0010207|photosystem II assembly	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_01064	A	A1S	Potri.001G092900	Potri.001G092900(AS)	POPTR_0001s10490	sp|Q8H0Y8|WRK41_ARATH	Probable WRKY transcription factor 41 OS=Arabidopsis thaliana GN=WRKY41 PE=2 SV=2	AT4G11070.1	| Symbols: WRKY41, AtWRKY41 | WRKY family transcription factor | chr4:6759303-6760763 FORWARD LENGTH=313	LOC_Os08g29660.1	protein|WRKY69, expressed	IMGA|Medtr5g067680.1	WRKY transcription factor-30 chr5 27618450-27622967 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_01065	A	A1S	Potri.001G092800	Potri.001G092800(AS)	POPTR_0001s10500	NA	NA	AT5G41850.1	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr5:16756698-16757791 REVERSE LENGTH=224	LOC_Os05g12330.1	protein|uncharacterized protein KIAA1310, putative, expressed	NA	NA	GO:0008152|metabolic process	GO:0016787|hydrolase activity	GO:0005575|cellular_component
pt2_01066	A	A1S	Potri.001G092700	Potri.001G092700(AS)	POPTR_0001s10510	NA	NA	NA	NA	LOC_Os01g12110.2	protein|expressed protein	IMGA|contig_20851_1.1	Unknown protein contig_20851 193-515 H PREDN 20111014	GO:0006508|proteolysis GO:0008152|metabolic process GO:0043086|negative regulation of catalytic activity	GO:0004252|serine-type endopeptidase activity GO:0008236|serine-type peptidase activity GO:0042802|identical protein binding	GO:0005576|extracellular region GO:0005618|cell wall GO:0016020|membrane GO:0048196|plant extracellular matrix
pt2_01067	A	A1S	Potri.001G092600	Potri.001G092600(AS)	POPTR_0001s10520	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_01068	A	A1S	Potri.001G092500	Potri.001G092500(AS)	POPTR_0001s10530	sp|Q9FGM1|PYL8_ARATH	Abscisic acid receptor PYL8 OS=Arabidopsis thaliana GN=PYL8 PE=1 SV=1	AT5G53160.2	| Symbols: RCAR3, PYL8 | regulatory components of ABA receptor 3 | chr5:21561026-21561953 FORWARD LENGTH=188	LOC_Os02g15640.1	protein|CAPIP1, putative, expressed	IMGA|Medtr5g083270.1	Abscisic acid receptor PYL6 chr5 34938236-34936695 F EGN_Mt100125 20111014	GO:0006950|response to stress GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009789|positive regulation of abscisic acid mediated signaling pathway	GO:0004872|receptor activity GO:0005515|protein binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005739|mitochondrion
pt2_01069	A	A2S	Potri.001G092400	Potri.001G092400(AS) Potri.003G139300(BS)	POPTR_0001s10540	sp|Q9C7W2|ERF61_ARATH	Ethylene-responsive transcription factor ERF061 OS=Arabidopsis thaliana GN=ERF061 PE=2 SV=1	AT1G64380.1	| Symbols: | Integrase-type DNA-binding superfamily protein | chr1:23890981-23891988 REVERSE LENGTH=335	LOC_Os05g49700.1	protein|AP2 domain containing protein, expressed	IMGA|Medtr5g009410.1	Ethylene-responsive transcription factor ERF061 chr5 2008215-2009542 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0010200|response to chitin GO:0015824|proline transport	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_01070	A	A1S	Potri.001G092300	Potri.001G092300(AS)	POPTR_0001s10550	NA	NA	AT1G64385.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 66 Blast hits to 66 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 4; Plants - 51; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). | chr1:23900309-23901956 FORWARD LENGTH=351	LOC_Os05g49750.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0005829|cytosol
pt2_01071	A	A2S	Potri.001G092200	Potri.001G092200(AS) Potri.001G092100(AA)	POPTR_0001s10560	sp|Q42059|GUN6_ARATH	Endoglucanase 6 OS=Arabidopsis thaliana GN=At1g64390 PE=2 SV=2	AT1G64390.1	| Symbols: AtGH9C2, GH9C2 | glycosyl hydrolase 9C2 | chr1:23911329-23914642 FORWARD LENGTH=620	LOC_Os01g12070.1	protein|endoglucanase precursor, putative, expressed	IMGA|Medtr5g085730.1	Endoglucanase chr5 36028973-36032829 E EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0030246|carbohydrate binding	GO:0005576|extracellular region
pt2_01072	A	A1S	Potri.001G092100	Potri.001G092100(AS)	POPTR_0001s10570	sp|Q5SN75|P2C08_ORYSJ	Probable protein phosphatase 2C 8 OS=Oryza sativa subsp. japonica GN=Os01g0656200 PE=2 SV=1	AT1G07430.1	| Symbols: HAI2 | highly ABA-induced PP2C gene 2 | chr1:2281151-2282656 REVERSE LENGTH=442	LOC_Os01g46760.1	protein|protein phosphatase 2C, putative, expressed	IMGA|Medtr5g009370.1	Protein phosphatase 2C chr5 1985761-1987219 E EGN_Mt100125 20111014	GO:0006470|protein dephosphorylation	GO:0003824|catalytic activity GO:0004722|protein serine/threonine phosphatase activity	GO:0005886|plasma membrane GO:0008287|protein serine/threonine phosphatase complex
pt2_01073	A	A1S	Potri.001G092000	Potri.001G092000(AS)	POPTR_0001s10580	NA	NA	AT4G23840.1	| Symbols: | Leucine-rich repeat (LRR) family protein | chr4:12400379-12403190 FORWARD LENGTH=597	LOC_Os05g12140.1	protein|Leucine Rich Repeat family protein, expressed	NA	NA	NA	NA	GO:0005575|cellular_component
pt2_01074	A	A1S	Potri.001G091900	Potri.001G091900(AS)	POPTR_0001s10590	sp|Q9T0A0|LACS4_ARATH	Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana GN=LACS4 PE=2 SV=1	AT4G23850.1	| Symbols: LACS4 | AMP-dependent synthetase and ligase family protein | chr4:12403720-12408263 REVERSE LENGTH=666	LOC_Os01g46750.1	protein|AMP-binding enzyme, putative, expressed	IMGA|Medtr5g009350.1	Long-chain-fatty-acid-CoA ligase chr5 1961227-1970077 F EGN_Mt100125 20111014	GO:0001676|long-chain fatty acid metabolic process GO:0002213|defense response to insect GO:0006631|fatty acid metabolic process GO:0006633|fatty acid biosynthetic process GO:0009611|response to wounding GO:0009805|coumarin biosynthetic process	GO:0003824|catalytic activity GO:0004467|long-chain fatty acid-CoA ligase activity	GO:0005634|nucleus GO:0005794|Golgi apparatus GO:0005886|plasma membrane
pt2_01075	A	A1S	Potri.001G091800	Potri.001G091800(AS)	POPTR_0001s10600	sp|Q42191|OXA1_ARATH	Mitochondrial inner membrane protein OXA1 OS=Arabidopsis thaliana GN=OXA1 PE=2 SV=2	AT5G62050.1	| Symbols: OXA1, ATOXA1, OXA1AT | homolog of yeast oxidase assembly 1 (OXA1) | chr5:24924062-24926758 REVERSE LENGTH=429	LOC_Os10g37690.1	protein|inner membrane protein, putative, expressed	NA	NA	GO:0006461|protein complex assembly GO:0006626|protein targeting to mitochondrion GO:0045039|protein import into mitochondrial inner membrane GO:0051205|protein insertion into membrane	GO:0015450|P-P-bond-hydrolysis-driven protein transmembrane transporter activity	GO:0005739|mitochondrion GO:0005743|mitochondrial inner membrane GO:0016020|membrane
pt2_01076	A	A1S	Potri.001G091700	Potri.001G091700(AS)	POPTR_0001s10610	sp|P0CH01|AT21A_ARATH	Putative RING-H2 finger protein ATL21A OS=Arabidopsis thaliana GN=ATL21A PE=3 SV=1	AT5G53110.1	| Symbols: | RING/U-box superfamily protein | chr5:21529022-21533008 FORWARD LENGTH=382	LOC_Os12g04130.1	protein|OsFBO23 - F-box and other domain containing protein, expressed	IMGA|Medtr5g009200.1	RING finger protein chr5 1909541-1908258 H EGN_Mt100125 20111014	GO:0006865|amino acid transport GO:0008150|biological_process	GO:0008270|zinc ion binding	NA
pt2_01077	A	A1S	Potri.001G091600	Potri.001G091600(AS)	POPTR_0001s10620	sp|Q8BU04|UBR7_MOUSE	Putative E3 ubiquitin-protein ligase UBR7 OS=Mus musculus GN=Ubr7 PE=2 SV=1	AT4G23860.3	| Symbols: | PHD finger protein-related | chr4:12409336-12411336 FORWARD LENGTH=452	LOC_Os06g33810.1	protein|zinc finger protein, putative, expressed	IMGA|Medtr5g009240.1	PHD finger-related protein chr5 1923878-1928665 E EGN_Mt100125 20111014	GO:0006261|DNA-dependent DNA replication	GO:0004842|ubiquitin-protein ligase activity GO:0008270|zinc ion binding	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_01078	A	A2S	Potri.001G091500	Potri.001G091500(AS) Potri.003G140100(DS)	POPTR_0001s10630	NA	NA	NA	NA	NA	NA	IMGA|Medtr5g009260.1	hypothetical protein chr5 1934783-1935440 F EGN_Mt100125 20111014	GO:0010227|floral organ abscission	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01079	B	B1S	Potri.001G091400	Potri.001G091400(BS)	POPTR_0001s10640	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01080	A	A1S	Potri.001G091300	Potri.001G091300(AS)	POPTR_0001s10650	NA	NA	AT4G23890.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3252 (InterPro:IPR021659); Has 287 Blast hits to 287 proteins in 81 species: Archae - 0; Bacteria - 118; Metazoa - 12; Fungi - 6; Plants - 40; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). | chr4:12420593-12421345 REVERSE LENGTH=250	LOC_Os07g09800.1	protein|expressed protein	NA	NA	GO:0008150|biological_process GO:0009637|response to blue light GO:0010155|regulation of proton transport GO:0030003|cellular cation homeostasis GO:0046777|protein autophosphorylation GO:0070838|divalent metal ion transport	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane
pt2_01081	A	A1S	Potri.001G091100	Potri.001G091100(AS)	POPTR_0001s10660	NA	NA	AT4G23895.2	| Symbols: | Pleckstrin homology (PH) domain-containing protein | chr4:12422883-12424146 FORWARD LENGTH=247	LOC_Os05g51710.1	protein|pleckstrin homology domain-containing protein-related taxo, putative, expressed	IMGA|Medtr5g009310.1	hypothetical protein chr5 1946465-1948403 F EGN_Mt100125 20111014	GO:0006165|nucleoside diphosphate phosphorylation GO:0006183|GTP biosynthetic process GO:0006228|UTP biosynthetic process GO:0006241|CTP biosynthetic process	GO:0004550|nucleoside diphosphate kinase activity GO:0005524|ATP binding GO:0005543|phospholipid binding	GO:0005575|cellular_component GO:0005634|nucleus GO:0009507|chloroplast
pt2_01082	A	A1S	Potri.001G091000	Potri.001G091000(AS)	POPTR_0001s10670	sp|O49203|NDK3_ARATH	Nucleoside diphosphate kinase III, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=NDPK3 PE=1 SV=1	AT4G11010.1	| Symbols: NDPK3 | nucleoside diphosphate kinase 3 | chr4:6732780-6734298 REVERSE LENGTH=238	LOC_Os05g51700.3	protein|nucleoside diphosphate kinase, putative, expressed	NA	NA	GO:0006165|nucleoside diphosphate phosphorylation GO:0006183|GTP biosynthetic process GO:0006228|UTP biosynthetic process GO:0006241|CTP biosynthetic process	GO:0004550|nucleoside diphosphate kinase activity GO:0005524|ATP binding GO:0005543|phospholipid binding	GO:0005575|cellular_component GO:0005634|nucleus GO:0009507|chloroplast
pt2_01083	A	A1S	Potri.001G090900	Potri.001G090900(AS)	POPTR_0001s10680	NA	NA	AT4G10970.4	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23910.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:6719718-6721885 REVERSE LENGTH=217	LOC_Os08g28690.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005739|mitochondrion
pt2_01084	A	A1S	Potri.001G090800	Potri.001G090800(AS)	POPTR_0001s10690	NA	NA	AT1G64430.2	| Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:23933541-23936336 FORWARD LENGTH=559	LOC_Os08g24390.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_01085	A	A1S	Potri.001G090700	Potri.001G090700(AS)	POPTR_0001s10700	sp|O65781|GALE2_CYATE	UDP-glucose 4-epimerase GEPI48 OS=Cyamopsis tetragonoloba PE=2 SV=1	AT4G10960.1	| Symbols: UGE5 | UDP-D-glucose/UDP-D-galactose 4-epimerase 5 | chr4:6716083-6718472 REVERSE LENGTH=351	LOC_Os05g51670.1	protein|NAD dependent epimerase/dehydratase family protein, putative, expressed	IMGA|Medtr5g009170.1	UDP-glucose 4-epimerase chr5 1896587-1893288 F EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0006012|galactose metabolic process GO:0006950|response to stress GO:0044237|cellular metabolic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0003978|UDP-glucose 4-epimerase activity GO:0016857|racemase and epimerase activity, acting on carbohydrates and derivatives GO:0046983|protein dimerization activity GO:0050662|coenzyme binding	GO:0005794|Golgi apparatus GO:0005829|cytosol GO:0005886|plasma membrane
pt2_01086	A	A1S	Potri.001G090600	Potri.001G090600(AS)	POPTR_0001s10710	sp|Q39828|SDL5A_SOYBN	Dynamin-related protein 5A OS=Glycine max PE=2 SV=1	AT5G42080.1	| Symbols: ADL1, ADL1A, AG68, DRP1A, RSW9, DL1 | dynamin-like protein | chr5:16820661-16824536 REVERSE LENGTH=610	LOC_Os05g48240.1	protein|dynamin family protein, putative, expressed	IMGA|Medtr5g009150.1	Dynamin-related protein 1A chr5 1886432-1881144 H EGN_Mt100125 20111014	GO:0009793|embryo development ending in seed dormancy GO:0009920|cell plate formation involved in plant-type cell wall biogenesis GO:0010051|xylem and phloem pattern formation GO:0010091|trichome branching GO:0032880|regulation of protein localization GO:0072583|clathrin-mediated endocytosis	GO:0003924|GTPase activity GO:0005515|protein binding GO:0005525|GTP binding GO:0030276|clathrin binding GO:0043424|protein histidine kinase binding	GO:0005737|cytoplasm GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005829|cytosol GO:0005874|microtubule GO:0005886|plasma membrane GO:0009504|cell plate GO:0009506|plasmodesma GO:0009535|chloroplast thylakoid membrane GO:0045334|clathrin-coated endocytic vesicle
pt2_01087	A	A1S	Potri.001G090500	Potri.001G090500(AS)	POPTR_0001s10720	sp|Q680C0|GDL62_ARATH	GDSL esterase/lipase At4g10955 OS=Arabidopsis thaliana GN=At4g10955 PE=2 SV=1	AT4G10955.2	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr4:6713778-6715372 REVERSE LENGTH=350	LOC_Os02g18480.1	protein|lipase class 3 family protein, putative, expressed	IMGA|Medtr5g028370.1	GDSL esterase/lipase chr5 11627059-11625249 H EGN_Mt100125 20111014	GO:0006629|lipid metabolic process	GO:0004806|triglyceride lipase activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01088	G	G1	NA	NA	POPTR_0001s10730	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01089	A	A1S	Potri.001G090300	Potri.001G090300(AS)	POPTR_0001s10740	sp|Q9C671|P4K2B_ARATH	Probable phosphatidylinositol 4-kinase type 2-beta At1g26270 OS=Arabidopsis thaliana GN=At1g26270 PE=1 SV=1	AT2G46500.2	| Symbols: ATPI4K GAMMA 4, UBDK GAMMA 4, PI4K GAMMA 4 | phosphoinositide 4-kinase gamma 4 | chr2:19086741-19088534 REVERSE LENGTH=566	LOC_Os05g51230.1	protein|phosphatidylinositol 3- and 4-kinase family protein, putative, expressed	IMGA|Medtr5g009120.1	Phosphatidylinositol 4-kinase type 2-beta chr5 1871136-1875092 E EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0002679|respiratory burst involved in defense response GO:0006499|N-terminal protein myristoylation GO:0006612|protein targeting to membrane GO:0006944|cellular membrane fusion GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009605|response to external stimulus GO:0009611|response to wounding GO:0009738|abscisic acid mediated signaling pathway GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010200|response to chitin GO:0010363|regulation of plant-type hypersensitive response GO:0030968|endoplasmic reticulum unfolded protein response GO:0031348|negative regulation of defense response GO:0035556|intracellular signal transduction GO:0042538|hyperosmotic salinity response GO:0043069|negative regulation of programmed cell death GO:0046854|phosphatidylinositol phosphorylation GO:0050832|defense response to fungus	GO:0004430|1-phosphatidylinositol 4-kinase activity GO:0016773|phosphotransferase activity, alcohol group as acceptor	GO:0005829|cytosol GO:0009507|chloroplast
pt2_01090	A	A1S	Potri.001G090200	Potri.001G090200(AS)	POPTR_0001s10750	sp|Q3HRP0|CNBL7_ORYSJ	Calcineurin B-like protein 7 OS=Oryza sativa subsp. japonica GN=CBL7 PE=2 SV=1	AT1G64480.1	| Symbols: CBL8 | calcineurin B-like protein 8 | chr1:23948028-23949751 REVERSE LENGTH=214	LOC_Os02g18880.1	protein|calcineurin B, putative, expressed	IMGA|Medtr5g096420.1	Calcineurin B-like protein chr5 41120501-41124331 F EGN_Mt100125 20111014	GO:0019722|calcium-mediated signaling	GO:0005509|calcium ion binding	GO:0005886|plasma membrane GO:0016020|membrane
pt2_01091	A	A1S	Potri.001G090100	Potri.001G090100(AS)	POPTR_0001s10760	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01092	A	A1S	Potri.001G089900	Potri.001G089900(AS)	POPTR_0001s10770	sp|Q8L7I1|Y4193_ARATH	Uncharacterized protein At4g10930 OS=Arabidopsis thaliana GN=At4g10930 PE=2 SV=1	AT4G10930.1	| Symbols: | unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:6705178-6708846 REVERSE LENGTH=984	LOC_Os12g10700.1	protein|expressed protein	NA	NA	GO:0000956|nuclear-transcribed mRNA catabolic process GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process	NA	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01093	A	A1S	Potri.001G089800	Potri.001G089800(AS)	POPTR_0001s10780	sp|O78516|FTSH_GUITH	ATP-dependent zinc metalloprotease FtsH OS=Guillardia theta GN=ftsH PE=3 SV=1	AT4G23940.1	| Symbols: | FtsH extracellular protease family | chr4:12437108-12441841 FORWARD LENGTH=946	LOC_Os06g45820.1	protein|OsFtsH2 FtsH protease, homologue of AtFtsH2/8, expressed	IMGA|Medtr5g075340.1	Cell division protease ftsH-like protein chr5 31010140-31015963 H EGN_Mt100125 20111014	GO:0007020|microtubule nucleation GO:0009658|chloroplast organization GO:0010020|chloroplast fission	GO:0000166|nucleotide binding GO:0004222|metalloendopeptidase activity GO:0005524|ATP binding GO:0008237|metallopeptidase activity GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity	GO:0005886|plasma membrane GO:0009507|chloroplast GO:0009536|plastid GO:0009941|chloroplast envelope
pt2_01094	A	A1S	Potri.001G089700	Potri.001G089700(AS)	POPTR_0001s10790	sp|O59729|SLPI_SCHPO	Uncharacterized protein slp1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=slp1 PE=2 SV=1	AT4G23950.1	| Symbols: | Galactose-binding protein | chr4:12442297-12444330 FORWARD LENGTH=561	LOC_Os01g41600.1	protein|Sad1 / UNC-like C-terminal domain containing protein, putative, expressed	IMGA|contig_55446_1.1	Sad1/UNC domain protein contig_55446 4590-1013 H PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0046658|anchored to plasma membrane
pt2_01095	A	A1S	Potri.001G089600	Potri.001G089600(AS)	POPTR_0001s10800	sp|Q93YV9|SKIP8_ARATH	F-box protein SKIP8 OS=Arabidopsis thaliana GN=SKIP8 PE=1 SV=1	AT4G10925.3	| Symbols: | Nuclear transport factor 2 (NTF2) family protein | chr4:6702987-6704283 REVERSE LENGTH=231	LOC_Os01g36940.1	protein|OsFBX13 - F-box domain containing protein, expressed	NA	NA	GO:0006635|fatty acid beta-oxidation GO:0008150|biological_process GO:0016558|protein import into peroxisome matrix GO:0048573|photoperiodism, flowering	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_01096	A	A1S	Potri.001G089500	Potri.001G089500(AS)	POPTR_0001s10810	NA	NA	AT5G42070.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:16819118-16820119 REVERSE LENGTH=164	LOC_Os01g13390.1	protein|expressed protein	NA	NA	GO:0008150|biological_process GO:0009965|leaf morphogenesis GO:0030154|cell differentiation GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003674|molecular_function	GO:0005634|nucleus GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane
pt2_01097	A	A1S	Potri.001G089500	Potri.001G089500(AS)	POPTR_0001s10810	NA	NA	AT5G42070.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:16819118-16820119 REVERSE LENGTH=164	LOC_Os01g13390.1	protein|expressed protein	NA	NA	GO:0008150|biological_process GO:0009965|leaf morphogenesis GO:0030154|cell differentiation GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003674|molecular_function	GO:0005634|nucleus GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane
pt2_01098	A	A1S	Potri.001G089500	Potri.001G089500(AS)	POPTR_0001s10810	NA	NA	AT5G42070.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:16819118-16820119 REVERSE LENGTH=164	LOC_Os01g13390.1	protein|expressed protein	NA	NA	GO:0008150|biological_process GO:0009965|leaf morphogenesis GO:0030154|cell differentiation GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003674|molecular_function	GO:0005634|nucleus GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane
pt2_01099	A	A1S	Potri.001G089400	Potri.001G089400(AS)	POPTR_0001s10820	sp|O65155|KELP_ARATH	RNA polymerase II transcriptional coactivator KELP OS=Arabidopsis thaliana GN=KELP PE=1 SV=1	AT4G10920.2	| Symbols: KELP | transcriptional coactivator p15 (PC4) family protein (KELP) | chr4:6697894-6699103 REVERSE LENGTH=165	LOC_Os01g50960.1	protein|RNA polymerase II transcriptional coactivator KELP, putative, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003713|transcription coactivator activity GO:0005515|protein binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01100	A	A1S	Potri.001G089300	Potri.001G089300(AS)	POPTR_0001s10830	sp|Q9LJD7|COP10_ARATH	Constitutive photomorphogenesis protein 10 OS=Arabidopsis thaliana GN=COP10 PE=1 SV=1	AT3G13550.1	| Symbols: FUS9, EMB144, COP10, CIN4 | Ubiquitin-conjugating enzyme family protein | chr3:4423569-4424797 REVERSE LENGTH=182	LOC_Os07g38940.1	protein|ubiquitin-conjugating enzyme, putative, expressed	IMGA|Medtr5g075580.1	Ubiquitin carrier protein chr5 31157779-31152864 E EGN_Mt100125 20111014	GO:0009640|photomorphogenesis GO:0010099|regulation of photomorphogenesis GO:0010388|cullin deneddylation GO:0042023|DNA endoreduplication GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0043248|proteasome assembly GO:0051510|regulation of unidimensional cell growth GO:0051788|response to misfolded protein	GO:0004842|ubiquitin-protein ligase activity GO:0005515|protein binding GO:0016881|acid-amino acid ligase activity	GO:0005634|nucleus
pt2_01101	A	A1S	Potri.001G089200	Potri.001G089200(AS)	POPTR_0001s10840	sp|Q9SUK9|P2C55_ARATH	Probable protein phosphatase 2C 55 OS=Arabidopsis thaliana GN=At4g16580 PE=2 SV=2	AT4G16580.1	| Symbols: | Protein phosphatase 2C family protein | chr4:9341152-9342555 REVERSE LENGTH=467	LOC_Os03g59470.1	protein|stage II sporulation protein E, putative, expressed	IMGA|Medtr5g019790.1	Mitochondrial catalytic protein chr5 7246834-7244365 F EGN_Mt100125 20111014	NA	GO:0003824|catalytic activity	GO:0005739|mitochondrion
pt2_01102	A	A1S	Potri.001G089100	Potri.001G089100(AS)	POPTR_0001s10850	sp|Q9LXA8|BXL6_ARATH	Probable beta-D-xylosidase 6 OS=Arabidopsis thaliana GN=BXL6 PE=2 SV=1	AT5G10560.1	| Symbols: | Glycosyl hydrolase family protein | chr5:3336335-3339351 REVERSE LENGTH=792	LOC_Os04g44840.1	protein|glycosyl hydrolase family 3 protein, putative, expressed	IMGA|Medtr5g030860.1	Beta-D-xylosidase chr5 12766808-12771719 E EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process	GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0009044|xylan 1,4-beta-xylosidase activity	GO:0005576|extracellular region GO:0005773|vacuole GO:0005774|vacuolar membrane
pt2_01103	A	A1S	Potri.001G089000	Potri.001G089000(AS)	POPTR_0001s10860	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006499|N-terminal protein myristoylation	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01104	C	C1S	Potri.001G088900	Potri.001G088900(CS)	sp|Q9FLE8|Y5986_ARATH	Uncharacterized protein At5g39865 OS=Arabidopsis thaliana GN=At5g39865 PE=1 SV=1	AT1G64500.1	| Symbols: | Glutaredoxin family protein | chr1:23953270-23954376 FORWARD LENGTH=368	LOC_Os01g13480.1	protein|glutaredoxin, putative, expressed	IMGA|Medtr1g090400.1	Glutaredoxin domain-containing cysteine-rich protein chr1 24959357-24960466 H EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0009902|chloroplast relocation GO:0045454|cell redox homeostasis GO:0048653|anther development GO:0051017|actin filament bundle assembly	GO:0009055|electron carrier activity GO:0015035|protein disulfide oxidoreductase activity	GO:0005634|nucleus GO:0005884|actin filament
pt2_01105	A	A1S	Potri.001G088800	Potri.001G088800(AS)	POPTR_0001s10880	sp|P37707|B2_DAUCA	B2 protein OS=Daucus carota PE=2 SV=1	AT5G42050.1	| Symbols: | DCD (Development and Cell Death) domain protein | chr5:16815630-16816932 FORWARD LENGTH=349	LOC_Os01g36950.2	protein|N-rich protein, putative, expressed	IMGA|contig_74333_1.1	Gda-1 contig_74333 1591-4533 F PREDN 20111014	GO:0000165|MAPK cascade GO:0006499|N-terminal protein myristoylation GO:0006612|protein targeting to membrane GO:0009409|response to cold GO:0009605|response to external stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010363|regulation of plant-type hypersensitive response GO:0030968|endoplasmic reticulum unfolded protein response GO:0031348|negative regulation of defense response GO:0043069|negative regulation of programmed cell death GO:0050832|defense response to fungus	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_01106	A	A2S	Potri.001G088700	Potri.001G088700(AS) Potri.003G142000(DS)	POPTR_0001s10890	sp|P52410|KASC1_ARATH	3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Arabidopsis thaliana GN=KAS1 PE=1 SV=2	AT5G46290.1	| Symbols: KASI, KAS1 | 3-ketoacyl-acyl carrier protein synthase I | chr5:18774439-18776629 REVERSE LENGTH=473	LOC_Os06g09630.1	protein|3-oxoacyl-synthase, putative, expressed	NA	NA	GO:0000038|very long-chain fatty acid metabolic process GO:0006633|fatty acid biosynthetic process GO:0008152|metabolic process GO:0009058|biosynthetic process GO:0009409|response to cold GO:0009790|embryo development GO:0010020|chloroplast fission GO:0042335|cuticle development	GO:0003824|catalytic activity GO:0004312|fatty acid synthase activity GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0009507|chloroplast GO:0009536|plastid GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope GO:0016020|membrane
pt2_01107	A	A1S	Potri.001G088600	Potri.001G088600(AS)	POPTR_0001s10900	sp|Q9XED8|ARFI_ARATH	Auxin response factor 9 OS=Arabidopsis thaliana GN=ARF9 PE=2 SV=1	AT4G23980.1	| Symbols: ARF9 | auxin response factor 9 | chr4:12451592-12454737 FORWARD LENGTH=638	LOC_Os02g35140.1	protein|auxin response factor 7, putative, expressed	IMGA|Medtr5g076270.1	Auxin response factor chr5 31499972-31490689 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009725|response to hormone stimulus	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_01108	B	B1S	Potri.001G088600	Potri.001G088600(BS)	POPTR_0001s10900	sp|Q9XED8|ARFI_ARATH	Auxin response factor 9 OS=Arabidopsis thaliana GN=ARF9 PE=2 SV=1	AT4G23980.1	| Symbols: ARF9 | auxin response factor 9 | chr4:12451592-12454737 FORWARD LENGTH=638	LOC_Os02g35140.1	protein|auxin response factor 7, putative, expressed	IMGA|Medtr5g076270.1	Auxin response factor chr5 31499972-31490689 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009725|response to hormone stimulus	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_01109	B	B1S	Potri.001G088600	Potri.001G088600(BS)	POPTR_0001s10900	sp|Q9XED8|ARFI_ARATH	Auxin response factor 9 OS=Arabidopsis thaliana GN=ARF9 PE=2 SV=1	AT4G23980.1	| Symbols: ARF9 | auxin response factor 9 | chr4:12451592-12454737 FORWARD LENGTH=638	LOC_Os02g35140.1	protein|auxin response factor 7, putative, expressed	IMGA|Medtr5g076270.1	Auxin response factor chr5 31499972-31490689 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009725|response to hormone stimulus	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_01110	A	A1S	Potri.001G088500	Potri.001G088500(AS)	POPTR_0001s10910	sp|Q0WVN5|CSLG3_ARATH	Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2	AT4G23990.1	| Symbols: ATCSLG3, CSLG3 | cellulose synthase like G3 | chr4:12456491-12460498 FORWARD LENGTH=751	LOC_Os07g24190.2	protein|CESA3 - cellulose synthase, expressed	IMGA|contig_10763_1.1	Cellulose synthase contig_10763 678-4315 H PREDN 20111014	GO:0000271|polysaccharide biosynthetic process GO:0030244|cellulose biosynthetic process	GO:0016740|transferase activity GO:0016757|transferase activity, transferring glycosyl groups GO:0016759|cellulose synthase activity GO:0016760|cellulose synthase (UDP-forming) activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_01111	A	A1S	Potri.001G088400	Potri.001G088400(AS)	POPTR_0001s10920	sp|Q84TF5|RHA4A_ARATH	RING-H2 zinc finger protein RHA4a OS=Arabidopsis thaliana GN=RHA4A PE=2 SV=1	AT4G24015.1	| Symbols: | RING/U-box superfamily protein | chr4:12469887-12471197 REVERSE LENGTH=174	LOC_Os02g35144.1	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr5g026730.1	RING finger family protein chr5 10788362-10788966 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0008270|zinc ion binding	GO:0005575|cellular_component
pt2_01112	A	A1S	Potri.001G088300	Potri.001G088300(AS)	POPTR_0001s10930	sp|Q8VY91|RR6_ARATH	30S ribosomal protein S6 alpha, chloroplastic OS=Arabidopsis thaliana GN=RPS6 PE=1 SV=1	AT1G64510.1	| Symbols: | Translation elongation factor EF1B/ribosomal protein S6 family protein | chr1:23954993-23956205 REVERSE LENGTH=207	LOC_Os03g62630.1	protein|ribosomal protein S6, putative, expressed	NA	NA	GO:0006412|translation GO:0010027|thylakoid membrane organization	GO:0003735|structural constituent of ribosome GO:0019843|rRNA binding	GO:0005840|ribosome GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009579|thylakoid
pt2_01113	A	A1S	Potri.001G088200	Potri.001G088200(AS)	POPTR_0001s10940	sp|Q9SGW3|RP12A_ARATH	26S proteasome non-ATPase regulatory subunit RPN12A OS=Arabidopsis thaliana GN=RPN12A PE=1 SV=1	AT1G64520.1	| Symbols: RPN12a | regulatory particle non-ATPase 12A | chr1:23956459-23958120 FORWARD LENGTH=267	LOC_Os07g25420.1	protein|26S proteasome non-ATPase regulatory subunit 8, putative, expressed	IMGA|Medtr1g016750.1	26S proteasome non-ATPase regulatory subunit chr1 4926610-4930733 F EGN_Mt100125 20111014	GO:0006508|proteolysis GO:0006511|ubiquitin-dependent protein catabolic process GO:0006635|fatty acid beta-oxidation GO:0009407|toxin catabolic process GO:0009408|response to heat GO:0009647|skotomorphogenesis GO:0009733|response to auxin stimulus GO:0009735|response to cytokinin stimulus GO:0009908|flower development GO:0030163|protein catabolic process GO:0031540|regulation of anthocyanin biosynthetic process GO:0042023|DNA endoreduplication GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0043248|proteasome assembly GO:0048366|leaf development GO:0048528|post-embryonic root development GO:0048767|root hair elongation GO:0048825|cotyledon development GO:0051510|regulation of unidimensional cell growth GO:0051604|protein maturation GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	GO:0008233|peptidase activity	GO:0000502|proteasome complex GO:0005634|nucleus GO:0005829|cytosol GO:0005838|proteasome regulatory particle GO:0008541|proteasome regulatory particle, lid subcomplex GO:0009941|chloroplast envelope
pt2_01114	A	A1S	Potri.001G088100	Potri.001G088100(AS)	POPTR_0001s10950	sp|Q9M3A3|ABIL2_ARATH	Protein ABIL2 OS=Arabidopsis thaliana GN=ABIL2 PE=1 SV=1	AT3G49290.2	| Symbols: ABIL2 | ABL interactor-like protein 2 | chr3:18273407-18275221 FORWARD LENGTH=312	LOC_Os01g37110.1	protein|ABIL2, putative, expressed	IMGA|contig_65138_2.1	Protein ABIL1 contig_65138 4880-2197 E PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_01115	A	A1S	Potri.001G088000	Potri.001G088000(AS)	POPTR_0001s10960	sp|Q84TI6|CDKE1_ARATH	Cyclin-dependent kinase E-1 OS=Arabidopsis thaliana GN=CDKE-1 PE=1 SV=2	AT5G63610.1	| Symbols: HEN3, CDKE;1, ATCDK8 | cyclin-dependent kinase E;1 | chr5:25463645-25465057 REVERSE LENGTH=470	LOC_Os10g42950.1	protein|cyclin-dependent kinase E-1, putative, expressed	IMGA|Medtr5g008860.1	hypothetical protein chr5 1727811-1731359 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0010440|stomatal lineage progression GO:0042023|DNA endoreduplication GO:0045736|negative regulation of cyclin-dependent protein kinase activity	GO:0005515|protein binding GO:0016301|kinase activity	GO:0005634|nucleus
pt2_01116	A	A1S	Potri.001G087900	Potri.001G087900(AS)	POPTR_0001s10970	sp|Q84TH9|NLP7_ARATH	Protein NLP7 OS=Arabidopsis thaliana GN=NLP7 PE=1 SV=2	AT4G24020.1	| Symbols: NLP7 | NIN like protein 7 | chr4:12479904-12483822 FORWARD LENGTH=959	LOC_Os01g13540.1	protein|NIN, putative, expressed	IMGA|Medtr5g099060.1	Nodule inception protein chr5 42369070-42372458 E EGN_Mt100125 20111014	GO:0009414|response to water deprivation GO:0010167|response to nitrate GO:0042128|nitrate assimilation	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_01117	A	A1S	Potri.001G087800	Potri.001G087800(AS)	POPTR_0001s10980	sp|P0CI65|NPHP3_DANRE	Nephrocystin-3 OS=Danio rerio GN=nphp3 PE=3 SV=1	AT4G10840.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:6656614-6659033 FORWARD LENGTH=609	LOC_Os02g01960.1	protein|tetratricopeptide repeat domain containing protein, expressed	NA	NA	NA	NA	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_01118	A	A1S	Potri.001G087700	Potri.001G087700(AS)	POPTR_0001s10990	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01119	A	A1S	Potri.001G087600	Potri.001G087600(AS)	POPTR_0001s11000	sp|Q9LIR6|BAM1_ARATH	Beta-amylase 1, chloroplastic OS=Arabidopsis thaliana GN=BAM1 PE=1 SV=1	AT3G23920.1	| Symbols: BAM1, BMY7, TR-BAMY | beta-amylase 1 | chr3:8641722-8644199 FORWARD LENGTH=575	LOC_Os01g13550.1	protein|beta-amylase, putative, expressed	IMGA|Medtr5g013620.1	Beta-amylase chr5 4108565-4105840 E EGN_Mt100125 20111014	GO:0000272|polysaccharide catabolic process GO:0005975|carbohydrate metabolic process GO:0005983|starch catabolic process GO:0009414|response to water deprivation	GO:0003824|catalytic activity GO:0016161|beta-amylase activity GO:0043169|cation binding	GO:0005634|nucleus GO:0005829|cytosol GO:0009507|chloroplast
pt2_01120	A	A1S	Potri.001G087500	Potri.001G087500(AS)	POPTR_0001s11010	sp|Q03685|BIP5_TOBAC	Luminal-binding protein 5 OS=Nicotiana tabacum GN=BIP5 PE=2 SV=1	AT5G42020.1	| Symbols: BIP, BIP2 | Heat shock protein 70 (Hsp 70) family protein | chr5:16807697-16810480 REVERSE LENGTH=668	LOC_Os02g02410.1	protein|DnaK family protein, putative, expressed	IMGA|Medtr5g066800.1	Heat shock protein chr5 27240729-27238467 H EGN_Mt100125 20111014	GO:0006457|protein folding GO:0009408|response to heat GO:0010197|polar nucleus fusion GO:0030433|ER-associated protein catabolic process GO:0034976|response to endoplasmic reticulum stress GO:0046686|response to cadmium ion	GO:0005524|ATP binding	GO:0005618|cell wall GO:0005634|nucleus GO:0005730|nucleolus GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005783|endoplasmic reticulum GO:0005788|endoplasmic reticulum lumen GO:0005794|Golgi apparatus GO:0005829|cytosol GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0009507|chloroplast GO:0016020|membrane GO:0016592|mediator complex
pt2_01121	A	A1S	Potri.001G087400	Potri.001G087400(AS)	POPTR_0001s11020	sp|P38795|NADE_YEAST	Glutamine-dependent NAD(+) synthetase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=QNS1 PE=1 SV=1	AT1G55090.1	| Symbols: | carbon-nitrogen hydrolase family protein | chr1:20554857-20558188 FORWARD LENGTH=725	LOC_Os07g07260.1	protein|glutamine-dependent NAD, putative, expressed	NA	NA	GO:0006807|nitrogen compound metabolic process GO:0009435|NAD biosynthetic process GO:0046686|response to cadmium ion	GO:0003952|NAD+ synthase (glutamine-hydrolyzing) activity GO:0005524|ATP binding GO:0016810|hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	GO:0005829|cytosol
pt2_01122	A	A1S	Potri.001G087300	Potri.001G087300(AS)	POPTR_0001s11030	sp|Q8H0V6|AB3F_ARATH	ABC transporter F family member 3 OS=Arabidopsis thaliana GN=ABCF3 PE=2 SV=1	AT1G64550.1	| Symbols: ATGCN3, GCN3 | general control non-repressible 3 | chr1:23968850-23973369 FORWARD LENGTH=715	LOC_Os02g58020.1	protein|ABC transporter, ATP-binding protein, putative, expressed	NA	NA	GO:0006094|gluconeogenesis GO:0006096|glycolysis GO:0006406|mRNA export from nucleus GO:0006606|protein import into nucleus GO:0007010|cytoskeleton organization GO:0009651|response to salt stress GO:0010498|proteasomal protein catabolic process GO:0042742|defense response to bacterium GO:0046686|response to cadmium ion	GO:0000166|nucleotide binding GO:0005215|transporter activity GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_01123	C	C1S	Potri.001G087200	Potri.001G087200(CS)	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_01124	A	A1S	Potri.001G087100	Potri.001G087100(AS)	POPTR_0001s11050	sp|Q9SU50|TRE1_ARATH	Trehalase OS=Arabidopsis thaliana GN=TRE1 PE=2 SV=1	AT4G24040.1	| Symbols: ATTRE1, TRE1 | trehalase 1 | chr4:12488242-12491060 FORWARD LENGTH=626	LOC_Os10g37660.1	protein|trehalase precursor, putative, expressed	NA	NA	GO:0005991|trehalose metabolic process GO:0005993|trehalose catabolic process	GO:0003824|catalytic activity GO:0004555|alpha,alpha-trehalase activity GO:0015927|trehalase activity	GO:0005886|plasma membrane
pt2_01125	A	A2S	Potri.001G087000	Potri.001G087000(AS) Potri.006G191300(BS)	POPTR_0001s11060	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01126	A	A2S	Potri.001G086900	Potri.001G086900(AS) Potri.003G144100(DS)	POPTR_0001s11070	sp|Q6RVV4|TIC32_PEA	Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum GN=TIC32 PE=1 SV=1	AT4G24050.1	| Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr4:12497287-12499661 FORWARD LENGTH=332	LOC_Os06g03830.1	protein|retinol dehydrogenase, putative, expressed	IMGA|contig_12100_1.1	Retinol dehydrogenase contig_12100 683-1422 E PREDN 20111014	GO:0008152|metabolic process	GO:0000166|nucleotide binding GO:0016491|oxidoreductase activity	NA
pt2_01127	A	A1S	Potri.001G086800	Potri.001G086800(AS)	POPTR_0001s11080	sp|Q2TBP8|MET17_BOVIN	Methyltransferase-like protein 17, mitochondrial OS=Bos taurus GN=METTL17 PE=2 SV=1	AT1G64600.1	| Symbols: | methyltransferases;copper ion binding | chr1:23995996-23998625 FORWARD LENGTH=537	LOC_Os07g20150.1	protein|expressed protein	NA	NA	GO:0006412|translation	GO:0005507|copper ion binding GO:0008168|methyltransferase activity	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_01128	A	A1S	Potri.001G086700	Potri.001G086700(AS)	POPTR_0001s11100	sp|O22264|MYB12_ARATH	Transcription factor MYB12 OS=Arabidopsis thaliana GN=MYB12 PE=2 SV=1	AT5G49330.1	| Symbols: MYB111, ATMYB111, PFG3 | myb domain protein 111 | chr5:19999147-20001293 REVERSE LENGTH=342	LOC_Os05g35500.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr5g079670.1	Myb-like transcription factor chr5 33056957-33055245 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0051555|flavonol biosynthetic process	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_01129	A	A1S	Potri.001G086600	Potri.001G086600(AS)	POPTR_0001s11110	sp|Q9XSC3|WDR44_BOVIN	WD repeat-containing protein 44 OS=Bos taurus GN=WDR44 PE=1 SV=1	AT5G24320.1	| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr5:8284858-8287651 REVERSE LENGTH=694	LOC_Os03g02440.2	protein|WD repeat-containing protein 44, putative, expressed	NA	NA	GO:0007165|signal transduction GO:0010228|vegetative to reproductive phase transition of meristem GO:0016926|protein desumoylation GO:0050665|hydrogen peroxide biosynthetic process	GO:0004871|signal transducer activity	GO:0005737|cytoplasm GO:0005834|heterotrimeric G-protein complex
pt2_01130	A	A1S	Potri.001G086600	Potri.001G086600(AS)	POPTR_0001s11110	sp|Q9XSC3|WDR44_BOVIN	WD repeat-containing protein 44 OS=Bos taurus GN=WDR44 PE=1 SV=1	AT5G24320.1	| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr5:8284858-8287651 REVERSE LENGTH=694	LOC_Os03g02440.2	protein|WD repeat-containing protein 44, putative, expressed	NA	NA	GO:0007165|signal transduction GO:0010228|vegetative to reproductive phase transition of meristem GO:0016926|protein desumoylation GO:0050665|hydrogen peroxide biosynthetic process	GO:0004871|signal transducer activity	GO:0005737|cytoplasm GO:0005834|heterotrimeric G-protein complex
pt2_01131	A	A8S	Potri.001G086500	Potri.001G086500(AS) Potri.003G008100(BS) Potri.007G091500(BS) Potri.008G223100(BS) Potri.001G372600(BS) Potri.012G063600(BS) Potri.010G079600(DS) Potri.008G057200(DS)	POPTR_0001s11120	sp|P42698|DR111_ARATH	DNA-damage-repair/toleration protein DRT111, chloroplastic OS=Arabidopsis thaliana GN=DRT111 PE=2 SV=2	AT1G30480.1	| Symbols: DRT111 | D111/G-patch domain-containing protein | chr1:10790315-10792423 FORWARD LENGTH=387	LOC_Os01g34190.1	protein|G-patch domain containing protein, expressed	NA	NA	GO:0000724|double-strand break repair via homologous recombination GO:0006281|DNA repair GO:0006312|mitotic recombination GO:0006355|regulation of transcription, DNA-dependent GO:0009560|embryo sac egg cell differentiation GO:0010212|response to ionizing radiation GO:0043687|post-translational protein modification GO:0045893|positive regulation of transcription, DNA-dependent	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0009507|chloroplast
pt2_01132	A	A2S	Potri.001G086400	Potri.001G086400(AS) Potri.003G144500(DS)	POPTR_0001s11130	sp|Q8LAP8|DOF46_ARATH	Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana GN=DOF4.6 PE=2 SV=2	AT4G24060.1	| Symbols: | Dof-type zinc finger DNA-binding family protein | chr4:12503970-12505417 FORWARD LENGTH=342	LOC_Os04g47990.1	protein|dof zinc finger domain containing protein, putative, expressed	IMGA|Medtr5g031440.1	Dof zinc finger protein chr5 13054757-13055767 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01133	A	A2S	Potri.001G086300	Potri.001G086300(AS) Potri.003G144600(DS)	POPTR_0001s11140	sp|O42901|YBA9_SCHPO	Uncharacterized protein C119.09c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC119.09c PE=2 SV=3	AT5G42000.1	| Symbols: | ORMDL family protein | chr5:16799455-16800681 FORWARD LENGTH=154	LOC_Os07g26940.1	protein|ORM1, putative, expressed	IMGA|contig_9619_1.1	ORMDL family protein-like protein contig_9619 1209-2156 E PREDN 20111014	GO:0006457|protein folding	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0005783|endoplasmic reticulum GO:0016021|integral to membrane
pt2_01134	A	A1S	Potri.001G086200	Potri.001G086200(AS)	POPTR_0001s11150	sp|Q14FG6|RPOC1_POPAL	DNA-directed RNA polymerase subunit beta' OS=Populus alba GN=rpoC1 PE=3 SV=1	ATCG00180.1	| Symbols: RPOC1 | DNA-directed RNA polymerase family protein | chrC:20251-23084 REVERSE LENGTH=680	LOC_Os02g24614.1	protein|DNA-directed RNA polymerase subunit beta, putative, expressed	IMGA|AC151738_16.1	DNA-directed RNA polymerase AC151738.84 47513-46104 H EGN_Mt100125 20111014	GO:0006091|generation of precursor metabolites and energy GO:0006351|transcription, DNA-dependent GO:0006354|DNA-dependent transcription, elongation GO:0015979|photosynthesis	GO:0003677|DNA binding GO:0003899|DNA-directed RNA polymerase activity	GO:0009295|nucleoid GO:0009507|chloroplast
pt2_01135	A	A2S	Potri.001G086100	Potri.001G086100(AS) Potri.003G144700(DS)	POPTR_0001s11160	sp|Q8RX01|Y3567_ARATH	BTB/POZ domain-containing protein At3g05675 OS=Arabidopsis thaliana GN=At3g05675 PE=2 SV=1	AT3G05675.1	| Symbols: | BTB/POZ domain-containing protein | chr3:1658425-1659859 REVERSE LENGTH=441	LOC_Os06g03840.1	protein|H-BTB4 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed	NA	NA	NA	NA	GO:0005634|nucleus
pt2_01136	A	A1S	Potri.001G086000	Potri.001G086000(AS)	POPTR_0001s11170	sp|Q9XIN0|LHW_ARATH	Transcription factor LHW OS=Arabidopsis thaliana GN=LHW PE=1 SV=1	AT2G27230.2	| Symbols: LHW | transcription factor-related | chr2:11650895-11653840 FORWARD LENGTH=650	LOC_Os02g45170.1	protein|helix-loop-helix DNA-binding protein, putative, expressed	NA	NA	NA	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_01137	A	A2S	Potri.001G086000	Potri.001G086000(AS) Potri.003G144900(DS)	POPTR_0001s11170	sp|Q9XIN0|LHW_ARATH	Transcription factor LHW OS=Arabidopsis thaliana GN=LHW PE=1 SV=1	AT2G27230.2	| Symbols: LHW | transcription factor-related | chr2:11650895-11653840 FORWARD LENGTH=650	LOC_Os02g45170.1	protein|helix-loop-helix DNA-binding protein, putative, expressed	NA	NA	NA	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_01138	A	A1S	Potri.001G085900	Potri.001G085900(AS)	POPTR_0001s11180	sp|O23086|ALMTA_ARATH	Aluminum-activated malate transporter 10 OS=Arabidopsis thaliana GN=ALMT10 PE=2 SV=2	AT4G00910.1	| Symbols: | Aluminium activated malate transporter family protein | chr4:389370-391287 REVERSE LENGTH=497	LOC_Os02g45160.1	protein|aluminum-activated malate transporter, putative, expressed	IMGA|Medtr5g014310.1	hypothetical protein chr5 4526352-4523171 H EGN_Mt100125 20111014	GO:0010044|response to aluminum ion	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_01139	A	A1S	Potri.001G085800	Potri.001G085800(AS)	POPTR_0001s11190	NA	NA	AT5G63830.1	| Symbols: | HIT-type Zinc finger family protein | chr5:25543585-25544802 REVERSE LENGTH=405	LOC_Os10g37640.2	protein|HIT zinc finger domain containing protein, expressed	IMGA|Medtr5g025880.1	Kinase-like protein chr5 10317546-10325535 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_01140	A	A1S	Potri.001G085600	Potri.001G085600(AS)	POPTR_0001s11200	sp|Q6GQ69|FAF2B_XENLA	FAS-associated factor 2-B OS=Xenopus laevis GN=faf2-b PE=2 SV=1	AT4G10790.1	| Symbols: | UBX domain-containing protein | chr4:6640752-6643035 REVERSE LENGTH=480	LOC_Os10g37630.1	protein|UBX domain-containing protein, putative, expressed	IMGA|contig_48589_1.1	Fas-associated factor-like protein contig_48589 582-2703 E PREDN 20111014	GO:0006499|N-terminal protein myristoylation GO:0008150|biological_process	NA	GO:0005737|cytoplasm GO:0005886|plasma membrane
pt2_01141	A	A1S	Potri.001G085500	Potri.001G085500(AS)	POPTR_0001s11210	sp|Q944Q0|WNK8_ARATH	Serine/threonine-protein kinase WNK8 OS=Arabidopsis thaliana GN=WNK8 PE=1 SV=1	AT5G41990.1	| Symbols: WNK8, ATWNK8 | with no lysine (K) kinase 8 | chr5:16795085-16797562 REVERSE LENGTH=563	LOC_Os02g45130.1	protein|protein kinase, putative, expressed	IMGA|Medtr5g075220.1	With no lysine kinase chr5 30954366-30951020 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006865|amino acid transport GO:0006888|ER to Golgi vesicle-mediated transport GO:0009909|regulation of flower development GO:0009911|positive regulation of flower development GO:0010228|vegetative to reproductive phase transition of meristem GO:0016926|protein desumoylation GO:0043090|amino acid import GO:0046777|protein autophosphorylation GO:0048573|photoperiodism, flowering GO:0050665|hydrogen peroxide biosynthetic process	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_01142	A	A3S	Potri.001G085400	Potri.001G085400(AS) Potri.012G019100(DS) Potri.015G009200(DS)	POPTR_0001s11220	sp|Q9T096|YIPL6_ARATH	Protein yippee-like At4g27745 OS=Arabidopsis thaliana GN=At4g27745 PE=3 SV=2	AT4G27745.1	| Symbols: | Yippee family putative zinc-binding protein | chr4:13840530-13841279 FORWARD LENGTH=106	LOC_Os12g29960.1	protein|yippee zinc-binding protein, putative, expressed	IMGA|contig_48589_2.1	Protein yippee-like protein contig_48589 5769-4120 E PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01143	A	A1S	Potri.001G085200	Potri.001G085200(AS)	POPTR_0001s11230	sp|Q6EU10|MTA70_ORYSJ	Probable N6-adenosine-methyltransferase MT-A70-like OS=Oryza sativa subsp. japonica GN=Os02g0672600 PE=2 SV=1	AT4G10760.1	| Symbols: EMB1706, MTA | mRNAadenosine methylase | chr4:6619947-6623312 REVERSE LENGTH=685	LOC_Os02g45110.1	protein|MT-A70 domain containing protein, expressed	NA	NA	GO:0006139|nucleobase-containing compound metabolic process GO:0009793|embryo development ending in seed dormancy GO:0080009|mRNA methylation	GO:0005515|protein binding GO:0008168|methyltransferase activity GO:0008757|S-adenosylmethionine-dependent methyltransferase activity	GO:0005634|nucleus GO:0009507|chloroplast GO:0016607|nuclear speck
pt2_01144	A	A1S	Potri.001G085100	Potri.001G085100(AS)	POPTR_0001s11240	sp|Q9SK27|ENL1_ARATH	Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060 PE=1 SV=2	AT1G64640.1	| Symbols: ENODL8, AtENODL8 | early nodulin-like protein 8 | chr1:24022482-24023151 REVERSE LENGTH=191	LOC_Os03g02400.1	protein|plastocyanin-like domain containing protein, putative, expressed	IMGA|Medtr5g006040.1	Early nodulin-like protein chr5 502223-501280 F EGN_Mt100125 20111014	NA	GO:0005507|copper ion binding GO:0009055|electron carrier activity	GO:0005886|plasma membrane GO:0031225|anchored to membrane
pt2_01145	A	A1S	Potri.001G085000	Potri.001G085000(AS)	POPTR_0001s11250	sp|Q921Y4|MFSD5_MOUSE	Major facilitator superfamily domain-containing protein 5 OS=Mus musculus GN=Mfsd5 PE=2 SV=1	AT1G64650.1	| Symbols: | Major facilitator superfamily protein | chr1:24023805-24026336 REVERSE LENGTH=462	LOC_Os03g02380.1	protein|major facilitator superfamily domain-containing protein 5, putative, expressed	IMGA|Medtr5g016080.1	Major facilitator superfamily domain-containing protein chr5 5434867-5440129 H EGN_Mt100125 20111014	GO:0006084|acetyl-CoA metabolic process GO:0016126|sterol biosynthetic process GO:0016132|brassinosteroid biosynthetic process	NA	GO:0005768|endosome GO:0005774|vacuolar membrane GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0009507|chloroplast
pt2_01146	A	A1S	Potri.001G084900	Potri.001G084900(AS)	POPTR_0001s11260	sp|Q3YU43|HPCH_SHISS	4-hydroxy-2-oxo-heptane-1,7-dioate aldolase OS=Shigella sonnei (strain Ss046) GN=hpcH PE=3 SV=1	AT4G10750.1	| Symbols: | Phosphoenolpyruvate carboxylase family protein | chr4:6618724-6619800 FORWARD LENGTH=358	LOC_Os09g36030.1	protein|4-hydroxy-2-oxovalerate aldolase, putative, expressed	NA	NA	GO:0006094|gluconeogenesis GO:0006096|glycolysis GO:0006725|cellular aromatic compound metabolic process GO:0019253|reductive pentose-phosphate cycle GO:0019648|formaldehyde assimilation via xylulose monophosphate cycle GO:0019650|glucose catabolic process to butanediol GO:0019654|acetate fermentation	GO:0003824|catalytic activity GO:0016830|carbon-carbon lyase activity	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009536|plastid
pt2_01147	A	A2S	Potri.001G084800	Potri.001G084800(AS) Potri.003G145900(DA)	POPTR_0001s11270	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01148	A	A2S	Potri.001G084700	Potri.001G084700(AS) Potri.003G146000(DS)	POPTR_0001s11280	sp|Q551H4|FRAY2_DICDI	Serine/threonine-protein kinase fray2 OS=Dictyostelium discoideum GN=fray2 PE=3 SV=1	AT4G10730.1	| Symbols: | Protein kinase superfamily protein | chr4:6609793-6614786 REVERSE LENGTH=711	LOC_Os10g37480.1	protein|STE_PAK_Ste20_STLK.6 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	IMGA|Medtr5g045190.1	Serine/threonine protein kinase chr5 19408593-19396721 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_01149	A	A2S	Potri.001G084700	Potri.001G084700(AS) Potri.003G146000(DS)	POPTR_0001s11280	sp|Q551H4|FRAY2_DICDI	Serine/threonine-protein kinase fray2 OS=Dictyostelium discoideum GN=fray2 PE=3 SV=1	AT4G10730.1	| Symbols: | Protein kinase superfamily protein | chr4:6609793-6614786 REVERSE LENGTH=711	LOC_Os10g37480.1	protein|STE_PAK_Ste20_STLK.6 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	IMGA|Medtr5g045190.1	Serine/threonine protein kinase chr5 19408593-19396721 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_01150	A	A1S	Potri.001G084700	Potri.001G084700(AS)	POPTR_0001s11280	sp|Q551H4|FRAY2_DICDI	Serine/threonine-protein kinase fray2 OS=Dictyostelium discoideum GN=fray2 PE=3 SV=1	AT4G10730.1	| Symbols: | Protein kinase superfamily protein | chr4:6609793-6614786 REVERSE LENGTH=711	LOC_Os10g37480.1	protein|STE_PAK_Ste20_STLK.6 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed	IMGA|Medtr5g045190.1	Serine/threonine protein kinase chr5 19408593-19396721 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_01151	A	A1S	Potri.001G084600	Potri.001G084600(AS)	POPTR_0001s11290	NA	NA	AT5G41960.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:16789760-16790868 FORWARD LENGTH=217	LOC_Os04g49610.1	protein|expressed protein	IMGA|Medtr5g008220.1	hypothetical protein chr5 1471622-1469570 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_01152	A	A1S	Potri.001G084500	Potri.001G084500(AS)	POPTR_0001s11300	NA	NA	AT4G24090.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 144 Blast hits to 142 proteins in 73 species: Archae - 3; Bacteria - 62; Metazoa - 7; Fungi - 13; Plants - 44; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). | chr4:12512742-12514467 FORWARD LENGTH=308	LOC_Os09g35990.1	protein|expressed protein	NA	NA	GO:0008150|biological_process GO:0009965|leaf morphogenesis GO:0016556|mRNA modification GO:0030154|cell differentiation	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_01153	A	A1S	Potri.001G084400	Potri.001G084400(AS)	POPTR_0001s11310	sp|Q6R3L0|YSL1_ARATH	Metal-nicotianamine transporter YSL1 OS=Arabidopsis thaliana GN=YSL1 PE=2 SV=2	AT4G24120.1	| Symbols: YSL1, ATYSL1 | YELLOW STRIPE like 1 | chr4:12524581-12527023 FORWARD LENGTH=673	LOC_Os04g45860.1	protein|transposon protein, putative, unclassified, expressed	IMGA|Medtr1g007580.1	Metal-nicotianamine transporter YSL2 chr1 1011908-1008288 H EGN_Mt100125 20111014	GO:0003006|developmental process involved in reproduction GO:0006857|oligopeptide transport GO:0010039|response to iron ion GO:0048316|seed development GO:0055085|transmembrane transport	GO:0015198|oligopeptide transporter activity GO:0051980|iron-nicotianamine transmembrane transporter activity	GO:0005886|plasma membrane
pt2_01154	A	A2S	Potri.001G084300	Potri.001G084300(AS) Potri.003G146300(DS)	POPTR_0001s11320	sp|P09379|GYP7_YARLI	GTPase-activating protein GYP7 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=GYP7 PE=3 SV=2	AT5G41940.1	| Symbols: | Ypt/Rab-GAP domain of gyp1p superfamily protein | chr5:16782039-16785451 FORWARD LENGTH=549	LOC_Os09g35960.1	protein|TBC domain containing protein, expressed	IMGA|Medtr1g007590.3	GTPase activating-like protein chr1 1018744-1015229 E EGN_Mt100125 20111014	GO:0032313|regulation of Rab GTPase activity	GO:0005097|RAB GTPase activator activity	GO:0005622|intracellular GO:0005794|Golgi apparatus
pt2_01155	A	A2S	Potri.001G084200	Potri.001G084200(AS) Potri.003G146400(BS)	POPTR_0001s11330	NA	NA	AT4G24130.1	| Symbols: | Protein of unknown function, DUF538 | chr4:12527861-12528423 FORWARD LENGTH=157	LOC_Os01g11240.1	protein|DUF538 domain containing protein, putative, expressed	IMGA|contig_169528_1.1	Susceptibility homeodomain transcription factor contig_169528 967-509 H PREDN 20111014	GO:0008150|biological_process	NA	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_01156	C	C1S	Potri.001G084100	Potri.001G084100(CS)	sp|Q40863|EMB8_PICGL	Embryogenesis-associated protein EMB8 OS=Picea glauca GN=EMB8 PE=2 SV=1	AT3G50790.1	| Symbols: | esterase/lipase/thioesterase family protein | chr3:18880074-18881940 REVERSE LENGTH=408	LOC_Os02g43340.2	protein|hydrolase, alpha/beta fold family domain containing protein, expressed	NA	NA	GO:0009793|embryo development ending in seed dormancy	GO:0004091|carboxylesterase activity GO:0016787|hydrolase activity	NA
pt2_01157	A	A1S	Potri.001G084000	Potri.001G084000(AS)	POPTR_0001s11350	sp|P13254|MEGL_PSEPU	Methionine gamma-lyase OS=Pseudomonas putida GN=mdeA PE=1 SV=2	AT1G64660.1	| Symbols: ATMGL, MGL | methionine gamma-lyase | chr1:24028977-24030537 FORWARD LENGTH=441	LOC_Os10g37340.1	protein|cystathionine gamma-synthase, putative, expressed	NA	NA	GO:0006520|cellular amino acid metabolic process GO:0006730|one-carbon metabolic process GO:0009970|cellular response to sulfate starvation GO:0019458|methionine catabolic process via 2-oxobutanoate GO:0042631|cellular response to water deprivation GO:0051289|protein homotetramerization	GO:0003824|catalytic activity GO:0018826|methionine gamma-lyase activity	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_01158	A	A1S	Potri.001G083900	Potri.001G083900(AS)	POPTR_0001s11360	sp|O48927|C78A3_SOYBN	Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=2 SV=1	AT2G46660.1	| Symbols: CYP78A6 | cytochrome P450, family 78, subfamily A, polypeptide 6 | chr2:19153602-19155417 REVERSE LENGTH=530	LOC_Os08g43390.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g045250.1	Cytochrome P450 78A11 chr5 19442194-19440472 E EGN_Mt100125 20111014	GO:0048316|seed development	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0009507|chloroplast
pt2_01159	A	A1S	Potri.001G083800	Potri.001G083800(AS)	POPTR_0001s11370	sp|F4HPA7|MD10B_ARATH	Mediator of RNA polymerase II transcription subunit 10b OS=Arabidopsis thaliana GN=MED10B PE=1 SV=1	AT1G26665.1	| Symbols: | Mediator complex, subunit Med10 | chr1:9214510-9215426 FORWARD LENGTH=189	LOC_Os09g35920.2	protein|mediator of RNA polymerase II transcription subunit 10, putative, expressed	NA	NA	GO:0006357|regulation of transcription from RNA polymerase II promoter	GO:0001104|RNA polymerase II transcription cofactor activity	GO:0005634|nucleus GO:0016592|mediator complex
pt2_01160	A	A1S	Potri.001G083700	Potri.001G083700(AS)	POPTR_0001s11380	sp|P46897|ATHB7_ARATH	Homeobox-leucine zipper protein ATHB-7 OS=Arabidopsis thaliana GN=ATHB-7 PE=2 SV=2	AT2G46680.1	| Symbols: ATHB-7, ATHB7, HB-7 | homeobox 7 | chr2:19165777-19166773 REVERSE LENGTH=258	LOC_Os09g35910.1	protein|homeobox associated leucine zipper, putative, expressed	IMGA|Medtr5g038280.1	Homeobox-leucine zipper protein ATHB-16 chr5 16338163-16335797 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0042538|hyperosmotic salinity response GO:0045893|positive regulation of transcription, DNA-dependent	GO:0000976|transcription regulatory region sequence-specific DNA binding GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_01161	G	G1	NA	NA	POPTR_0001s11390	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01162	A	A1S	Potri.001G083500	Potri.001G083500(AS)	POPTR_0001s11400	sp|O23090|BH014_ARATH	Transcription factor bHLH14 OS=Arabidopsis thaliana GN=BHLH14 PE=2 SV=1	AT4G00870.1	| Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr4:362230-363639 REVERSE LENGTH=423	LOC_Os10g42430.1	protein|transcription factor MYC7E, putative, expressed	IMGA|Medtr5g030430.1	BHLH transcription factor chr5 12542132-12544882 E EGN_Mt100125 20111014	GO:0006568|tryptophan metabolic process GO:0006612|protein targeting to membrane GO:0009269|response to desiccation GO:0009611|response to wounding GO:0009620|response to fungus GO:0009694|jasmonic acid metabolic process GO:0009695|jasmonic acid biosynthetic process GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009753|response to jasmonic acid stimulus GO:0009759|indole glucosinolate biosynthetic process GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010200|response to chitin GO:0010363|regulation of plant-type hypersensitive response GO:0043069|negative regulation of programmed cell death GO:0043619|regulation of transcription from RNA polymerase II promoter in response to oxidative stress GO:0045893|positive regulation of transcription, DNA-dependent GO:0048364|root development GO:0051090|regulation of sequence-specific DNA binding transcription factor activity GO:2000068|regulation of defense response to insect	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_01163	A	A1S	Potri.001G083400	Potri.001G083400(AS)	POPTR_0001s11410	NA	NA	AT4G24140.1	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr4:12530032-12533664 REVERSE LENGTH=498	LOC_Os10g38860.1	protein|hydrolase, alpha/beta fold family domain containing protein, expressed	IMGA|contig_91404_1.1	Hydrolase alpha/beta fold family protein expressed contig_91404 816-234 E PREDN 20111014	NA	GO:0016787|hydrolase activity	GO:0005737|cytoplasm
pt2_01164	A	A1S	Potri.001G083300	Potri.001G083300(AS)	POPTR_0001s11420	NA	NA	AT1G64680.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03055.1); Has 146 Blast hits to 146 proteins in 26 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). | chr1:24036071-24037062 FORWARD LENGTH=250	LOC_Os08g02210.1	protein|expressed protein	IMGA|contig_85300_1.1	Homology to unknown gene contig_85300 66-2892 E PREDN 20111014	GO:0008150|biological_process GO:0016556|mRNA modification	GO:0003674|molecular_function	GO:0009534|chloroplast thylakoid GO:0009941|chloroplast envelope
pt2_01165	A	A2S	Potri.001G083200	Potri.001G083200(AS) Potri.003G147600(DS)	POPTR_0001s11430	sp|P05522|GUN1_PERAE	Endoglucanase 1 OS=Persea americana GN=CEL1 PE=2 SV=1	AT1G02800.1	| Symbols: ATCEL2, CEL2 | cellulase 2 | chr1:613386-616103 REVERSE LENGTH=501	LOC_Os08g02220.1	protein|endoglucanase, putative, expressed	IMGA|Medtr5g010000.1	Cellulase chr5 2335410-2338056 E EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0007389|pattern specification process GO:0009624|response to nematode GO:0009855|determination of bilateral symmetry GO:0009944|polarity specification of adaxial/abaxial axis GO:0010014|meristem initiation GO:0010051|xylem and phloem pattern formation GO:0010093|specification of floral organ identity GO:0048440|carpel development GO:0048507|meristem development	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0008810|cellulase activity	GO:0005576|extracellular region
pt2_01166	A	A2S	Potri.001G083100	Potri.001G083100(AS) Potri.003G147700(DS)	POPTR_0001s11440	sp|Q8BUV8|GP107_MOUSE	Protein GPR107 OS=Mus musculus GN=Gpr107 PE=2 SV=2	AT5G42090.1	| Symbols: | Lung seven transmembrane receptor family protein | chr5:16826830-16828149 FORWARD LENGTH=439	LOC_Os06g04130.1	protein|lung seven transmembrane domain containing protein, putative, expressed	NA	NA	NA	NA	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0009507|chloroplast GO:0016021|integral to membrane
pt2_01167	A	A1S	Potri.001G083000	Potri.001G083000(AS)	POPTR_0001s11450	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01168	A	A1S	Potri.001G082900	Potri.001G082900(AS)	POPTR_0001s11460	sp|C0LGH3|Y5614_ARATH	Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2	AT1G56140.1	| Symbols: | Leucine-rich repeat transmembrane protein kinase | chr1:21001708-21007725 REVERSE LENGTH=1033	LOC_Os08g10290.1	protein|SHR5-receptor-like kinase, putative, expressed	IMGA|Medtr5g091950.1	BED finger-nbs resistance protein chr5 39093432-39086414 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane GO:0016020|membrane
pt2_01169	A	A1S	Potri.001G082800	Potri.001G082800(AS)	POPTR_0001s11470	NA	NA	AT4G19550.1	| Symbols: | zinc ion binding;transcription regulators | chr4:10659414-10661170 REVERSE LENGTH=212	NA	NA	NA	NA	GO:0006352|DNA-dependent transcription, initiation GO:0006355|regulation of transcription, DNA-dependent	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_01170	A	A1S	Potri.001G082700	Potri.001G082700(AS)	POPTR_0001s11480	NA	NA	AT4G24150.1	| Symbols: AtGRF8, GRF8 | growth-regulating factor 8 | chr4:12535972-12539387 FORWARD LENGTH=493	LOC_Os02g47280.2	protein|growth-regulating factor, putative, expressed	IMGA|Medtr5g027030.1	hypothetical protein chr5 10949245-10952049 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009686|gibberellin biosynthetic process GO:0009740|gibberellic acid mediated signaling pathway GO:0016114|terpenoid biosynthetic process GO:0048366|leaf development	GO:0005524|ATP binding GO:0016818|hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	GO:0005634|nucleus GO:0009941|chloroplast envelope
pt2_01171	A	A1S	Potri.001G082600	Potri.001G082600(AS)	POPTR_0001s11490	NA	NA	AT1G64690.1	| Symbols: BLT | branchless trichome | chr1:24038069-24038890 FORWARD LENGTH=273	NA	NA	NA	NA	GO:0010090|trichome morphogenesis	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005886|plasma membrane
pt2_01172	A	A1S	Potri.001G082500	Potri.001G082500(AS)	POPTR_0001s11500	NA	NA	AT4G24110.1	| Symbols: | unknown protein; Has 76 Blast hits to 76 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:12520010-12520762 REVERSE LENGTH=250	NA	NA	NA	NA	GO:0080167|response to karrikin	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_01173	A	A1S	Potri.001G082400	Potri.001G082400(AS)	POPTR_0001s11510	sp|Q6R3L0|YSL1_ARATH	Metal-nicotianamine transporter YSL1 OS=Arabidopsis thaliana GN=YSL1 PE=2 SV=2	AT4G24120.1	| Symbols: YSL1, ATYSL1 | YELLOW STRIPE like 1 | chr4:12524581-12527023 FORWARD LENGTH=673	LOC_Os04g45860.1	protein|transposon protein, putative, unclassified, expressed	IMGA|Medtr1g007580.1	Metal-nicotianamine transporter YSL2 chr1 1011908-1008288 H EGN_Mt100125 20111014	GO:0003006|developmental process involved in reproduction GO:0006857|oligopeptide transport GO:0010039|response to iron ion GO:0048316|seed development GO:0055085|transmembrane transport	GO:0015198|oligopeptide transporter activity GO:0051980|iron-nicotianamine transmembrane transporter activity	GO:0005886|plasma membrane
pt2_01174	A	A2S	Potri.001G082300	Potri.001G082300(AS) Potri.003G148200(BA)	POPTR_0001s11520	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005576|extracellular region GO:0005886|plasma membrane
pt2_01175	G	G1	NA	NA	POPTR_0001s11530	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01176	A	A1S	Potri.001G082200	Potri.001G082200(AS)	POPTR_0001s11540	NA	NA	AT3G07200.2	| Symbols: | RING/U-box superfamily protein | chr3:2291343-2292223 FORWARD LENGTH=182	LOC_Os09g32690.1	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|contig_52784_1.1	RING finger protein contig_52784 30-4248 F PREDN 20111014	GO:0010200|response to chitin	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_01177	A	A1S	Potri.001G082100	Potri.001G082100(AS)	POPTR_0001s11550	sp|O43290|SNUT1_HUMAN	U4/U6.U5 tri-snRNP-associated protein 1 OS=Homo sapiens GN=SART1 PE=1 SV=1	AT5G16780.1	| Symbols: DOT2, MDF | SART-1 family | chr5:5517784-5521566 REVERSE LENGTH=820	LOC_Os02g30730.2	protein|SART-1 family protein, putative, expressed	NA	NA	GO:0006346|methylation-dependent chromatin silencing GO:0009640|photomorphogenesis GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009855|determination of bilateral symmetry GO:0009908|flower development GO:0009909|regulation of flower development GO:0009933|meristem structural organization GO:0010014|meristem initiation GO:0010073|meristem maintenance GO:0010087|phloem or xylem histogenesis GO:0010162|seed dormancy process GO:0010182|sugar mediated signaling pathway GO:0010228|vegetative to reproductive phase transition of meristem GO:0010305|leaf vascular tissue pattern formation GO:0010588|cotyledon vascular tissue pattern formation GO:0016246|RNA interference GO:0016567|protein ubiquitination GO:0019915|lipid storage GO:0048364|root development GO:0048366|leaf development GO:0048367|shoot development GO:0048528|post-embryonic root development GO:0050826|response to freezing	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005730|nucleolus
pt2_01178	A	A1S	Potri.001G082000	Potri.001G082000(AS)	POPTR_0001s11560	NA	NA	AT5G16950.1	| Symbols: | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:5572640-5572939 FORWARD LENGTH=99	LOC_Os01g15448.1	protein|expressed protein	IMGA|Medtr5g009530.1	Histone acetyltransferase type B subunit chr5 2065539-2079439 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_01179	C	C1S	Potri.001G082000	Potri.001G082000(CS)	NA	NA	AT5G16950.1	| Symbols: | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:5572640-5572939 FORWARD LENGTH=99	LOC_Os01g15448.1	protein|expressed protein	IMGA|Medtr5g009530.1	Histone acetyltransferase type B subunit chr5 2065539-2079439 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_01180	A	A1S	Potri.001G082000	Potri.001G082000(AS)	POPTR_0001s11560	NA	NA	AT5G16950.1	| Symbols: | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:5572640-5572939 FORWARD LENGTH=99	LOC_Os01g15448.1	protein|expressed protein	IMGA|Medtr5g009530.1	Histone acetyltransferase type B subunit chr5 2065539-2079439 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_01181	A	A1S	Potri.001G082000	Potri.001G082000(AS)	POPTR_0001s11560	NA	NA	AT5G16950.1	| Symbols: | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:5572640-5572939 FORWARD LENGTH=99	LOC_Os01g15448.1	protein|expressed protein	IMGA|Medtr5g009530.1	Histone acetyltransferase type B subunit chr5 2065539-2079439 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_01182	A	A1S	Potri.001G081900	Potri.001G081900(AS)	POPTR_0001s11570	sp|A4IG72|TGFA1_DANRE	Transforming growth factor-beta receptor-associated protein 1 homolog OS=Danio rerio GN=tgfbrap1 PE=2 SV=1	AT1G22860.1	| Symbols: | Vacuolar sorting protein 39 | chr1:8083400-8088867 FORWARD LENGTH=961	LOC_Os05g01360.1	protein|expressed protein	IMGA|contig_165584_1.1	Unknown protein contig_165584 152-1447 H PREDN 20111014	GO:0006886|intracellular protein transport GO:0016192|vesicle-mediated transport	GO:0005083|small GTPase regulator activity	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_01183	A	A1S	Potri.001G081800	Potri.001G081800(AS)	POPTR_0001s11580	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01184	A	A1S	Potri.001G081600	Potri.001G081600(AS)	POPTR_0001s11590	sp|Q9FKE6|CCT15_ARATH	Cyclin-T1-5 OS=Arabidopsis thaliana GN=CYCT1-5 PE=2 SV=2	AT5G45190.1	| Symbols: | Cyclin family protein | chr5:18277808-18280733 REVERSE LENGTH=579	LOC_Os12g30020.2	protein|cyclin-T1-4, putative, expressed	IMGA|Medtr5g055170.1	Cyclin-L1-1 chr5 22186882-22182089 F EGN_Mt100125 20111014	GO:0000079|regulation of cyclin-dependent protein kinase activity GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0006355|regulation of transcription, DNA-dependent GO:0006366|transcription from RNA polymerase II promoter GO:0006486|protein glycosylation GO:0008284|positive regulation of cell proliferation GO:0009615|response to virus GO:0009630|gravitropism GO:0009908|flower development GO:0010090|trichome morphogenesis GO:0048366|leaf development GO:0050792|regulation of viral reproduction GO:0051726|regulation of cell cycle	GO:0004693|cyclin-dependent protein kinase activity GO:0019901|protein kinase binding	GO:0005634|nucleus
pt2_01185	A	A1S	Potri.001G081500	Potri.001G081500(AS)	POPTR_0001s11600	sp|Q9SHE8|PSAF_ARATH	Photosystem I reaction center subunit III, chloroplastic OS=Arabidopsis thaliana GN=PSAF PE=1 SV=1	AT1G31330.1	| Symbols: PSAF | photosystem I subunit F | chr1:11215011-11215939 REVERSE LENGTH=221	LOC_Os03g56670.1	protein|photosystem I reaction center subunit III, chloroplast precursor, putative, expressed	IMGA|contig_83576_1.1	Photosystem I reaction center subunit III contig_83576 1562-44 F PREDN 20111014	GO:0015979|photosynthesis GO:0019344|cysteine biosynthetic process	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009522|photosystem I GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009538|photosystem I reaction center GO:0009579|thylakoid GO:0009941|chloroplast envelope GO:0010287|plastoglobule GO:0016020|membrane
pt2_01186	A	A1S	Potri.001G081400	Potri.001G081400(AS)	POPTR_0001s11610	sp|Q9SHE9|LBD4_ARATH	LOB domain-containing protein 4 OS=Arabidopsis thaliana GN=LBD4 PE=2 SV=1	AT1G31320.1	| Symbols: LBD4 | LOB domain-containing protein 4 | chr1:11213107-11214032 FORWARD LENGTH=172	LOC_Os05g27980.1	protein|DUF260 domain containing protein, putative, expressed	IMGA|Medtr5g083230.1	LOB domain-containing protein chr5 34907168-34908456 H EGN_Mt100125 20111014	GO:0008150|biological_process GO:0009855|determination of bilateral symmetry GO:0009944|polarity specification of adaxial/abaxial axis GO:0010014|meristem initiation GO:0010075|regulation of meristem growth	NA	GO:0005634|nucleus
pt2_01187	A	A1S	Potri.001G081300	Potri.001G081300(AS)	POPTR_0001s11620	NA	NA	AT1G80245.3	| Symbols: | Spc97 / Spc98 family of spindle pole body (SBP) component | chr1:30174547-30175217 FORWARD LENGTH=127	NA	NA	NA	NA	GO:0000226|microtubule cytoskeleton organization GO:0006626|protein targeting to mitochondrion	GO:0003674|molecular_function	NA
pt2_01188	A	A1S	Potri.001G081200	Potri.001G081200(AS)	POPTR_0001s11630	sp|Q9LNQ4|ALA4_ARATH	Putative phospholipid-transporting ATPase 4 OS=Arabidopsis thaliana GN=ALA4 PE=1 SV=2	AT1G17500.1	| Symbols: | ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein | chr1:6018757-6023201 FORWARD LENGTH=1216	LOC_Os06g36990.1	protein|phospholipid-transporting ATPase 4, putative, expressed	IMGA|Medtr5g037210.1	Phospholipid-translocating P-type ATPase flippase family protein chr5 15827138-15809797 E EGN_Mt100125 20111014	GO:0006812|cation transport GO:0008152|metabolic process GO:0015914|phospholipid transport	GO:0000166|nucleotide binding GO:0000287|magnesium ion binding GO:0003824|catalytic activity GO:0004012|phospholipid-translocating ATPase activity GO:0005524|ATP binding GO:0015662|ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism GO:0016820|hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances GO:0046872|metal ion binding	GO:0016020|membrane GO:0016021|integral to membrane
pt2_01189	A	A1S	Potri.001G081100	Potri.001G081100(AS)	POPTR_0001s11640	NA	NA	NA	NA	LOC_Os03g56620.1	protein|expressed protein	NA	NA	GO:0016051|carbohydrate biosynthetic process	GO:0016757|transferase activity, transferring glycosyl groups GO:0016758|transferase activity, transferring hexosyl groups GO:0047262|polygalacturonate 4-alpha-galacturonosyltransferase activity	GO:0005794|Golgi apparatus GO:0090406|pollen tube
pt2_01190	A	A1S	Potri.001G081000	Potri.001G081000(AS)	POPTR_0001s11650	sp|Q06106|MRD1_YEAST	Multiple RNA-binding domain-containing protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MRD1 PE=1 SV=1	AT4G19610.1	| Symbols: | nucleotide binding;nucleic acid binding;RNA binding | chr4:10677482-10681623 FORWARD LENGTH=816	LOC_Os04g52200.1	protein|RNA recognition motif containing protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding	GO:0005634|nucleus GO:0005730|nucleolus
pt2_01191	A	A1S	Potri.001G080900	Potri.001G080900(AS)	POPTR_0001s11660	sp|Q9SK55|NAC42_ARATH	NAC domain-containing protein 42 OS=Arabidopsis thaliana GN=NAC042 PE=2 SV=1	AT2G43000.1	| Symbols: anac042, NAC042 | NAC domain containing protein 42 | chr2:17880617-17882584 REVERSE LENGTH=275	LOC_Os03g56580.1	protein|no apical meristem protein, putative, expressed	IMGA|Medtr5g090970.1	NAC domain protein IPR003441 chr5 38593767-38597396 F EGN_Mt100125 20111014	GO:0005992|trehalose biosynthetic process GO:0006561|proline biosynthetic process GO:0007275|multicellular organismal development GO:0009627|systemic acquired resistance GO:0009718|anthocyanin-containing compound biosynthetic process GO:0009723|response to ethylene stimulus GO:0010120|camalexin biosynthetic process GO:0010150|leaf senescence GO:0034976|response to endoplasmic reticulum stress GO:0042538|hyperosmotic salinity response GO:1900056|negative regulation of leaf senescence	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01192	C	C1S	Potri.001G080800	Potri.001G080800(CS)	NA	NA	NA	NA	LOC_Os09g29700.1	protein|retrotransposon protein, putative, unclassified, expressed	NA	NA	NA	NA	NA
pt2_01193	A	A1S	Potri.001G080700	Potri.001G080700(AS)	POPTR_0001s11680	sp|Q41001|BCP_PEA	Blue copper protein OS=Pisum sativum PE=2 SV=1	AT5G07475.1	| Symbols: | Cupredoxin superfamily protein | chr5:2364827-2365536 REVERSE LENGTH=192	LOC_Os04g46120.1	protein|plastocyanin-like domain containing protein, putative, expressed	IMGA|Medtr1g090190.1	Blue copper protein chr1 24861169-24860250 H EGN_Mt100125 20111014	NA	GO:0005507|copper ion binding GO:0009055|electron carrier activity	GO:0005886|plasma membrane GO:0031225|anchored to membrane
pt2_01194	A	A1S	Potri.001G080600	Potri.001G080600(AS)	POPTR_0001s11690	sp|Q39224|SRG1_ARATH	Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1	AT5G07480.1	| Symbols: KUOX1 | KAR-UP oxidoreductase 1 | chr5:2367167-2369554 FORWARD LENGTH=340	LOC_Os04g57160.2	protein|flavonol synthase/flavanone 3-hydroxylase, putative, expressed	IMGA|Medtr5g065010.1	Gibberellin 3-beta-dioxygenase chr5 26345931-26349139 F EGN_Mt100125 20111014	GO:0009813|flavonoid biosynthetic process GO:0055114|oxidation-reduction process GO:0080167|response to karrikin	GO:0016491|oxidoreductase activity GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_01195	A	A1S	Potri.001G080500	Potri.001G080500(AS)	POPTR_0001s11700	NA	NA	AT5G61630.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G07490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:24773803-24774502 REVERSE LENGTH=147	NA	NA	IMGA|Medtr1g090200.1	hypothetical protein chr1 24863389-24862496 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_01196	C	C1S	Potri.001G080400	Potri.001G080400(CS)	sp|Q05737|YPTM2_MAIZE	GTP-binding protein YPTM2 OS=Zea mays GN=YPTM2 PE=2 SV=1	AT1G02130.1	| Symbols: ATRAB1B, ARA5, ARA-5, ATRABD2A, RABD2A, RA-5 | RAS 5 | chr1:400350-401788 REVERSE LENGTH=203	LOC_Os01g08450.1	protein|ras-related protein, putative, expressed	IMGA|Medtr1g068730.1	Ras-like protein chr1 17072901-17066690 F EGN_Mt100125 20111014	GO:0006888|ER to Golgi vesicle-mediated transport GO:0007264|small GTPase mediated signal transduction GO:0015031|protein transport GO:0046686|response to cadmium ion	GO:0005525|GTP binding	GO:0000139|Golgi membrane GO:0005773|vacuole GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0032588|trans-Golgi network membrane
pt2_01197	A	A1S	Potri.001G080400	Potri.001G080400(AS)	POPTR_0001s11720	sp|Q05737|YPTM2_MAIZE	GTP-binding protein YPTM2 OS=Zea mays GN=YPTM2 PE=2 SV=1	AT1G02130.1	| Symbols: ATRAB1B, ARA5, ARA-5, ATRABD2A, RABD2A, RA-5 | RAS 5 | chr1:400350-401788 REVERSE LENGTH=203	LOC_Os01g08450.1	protein|ras-related protein, putative, expressed	IMGA|Medtr1g068730.1	Ras-like protein chr1 17072901-17066690 F EGN_Mt100125 20111014	GO:0006888|ER to Golgi vesicle-mediated transport GO:0007264|small GTPase mediated signal transduction GO:0015031|protein transport GO:0046686|response to cadmium ion	GO:0005525|GTP binding	GO:0000139|Golgi membrane GO:0005773|vacuole GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0032588|trans-Golgi network membrane
pt2_01198	A	A1S	Potri.001G080300	Potri.001G080300(AS)	POPTR_0001s11730	sp|Q2V9B0|MY1R1_SOLTU	Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1	AT5G61620.1	| Symbols: | myb-like transcription factor family protein | chr5:24772383-24773507 FORWARD LENGTH=317	LOC_Os10g41200.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr5g037080.1	DIV1B protein chr5 15763383-15765765 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003676|nucleic acid binding GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_01199	A	A2S	Potri.001G080200	Potri.001G080200(AS) Potri.003G150500(BS)	POPTR_0001s11740	sp|Q8L6Y4|EMF2_ARATH	Polycomb group protein EMBRYONIC FLOWER 2 OS=Arabidopsis thaliana GN=EMF2 PE=1 SV=2	AT5G51230.1	| Symbols: EMF2, VEF2, CYR1, AtEMF2 | VEFS-Box of polycomb protein | chr5:20824153-20829344 FORWARD LENGTH=631	LOC_Os09g13630.1	protein|ZOS9-03 - C2H2 zinc finger protein, expressed	IMGA|Medtr5g013150.1	Polycomb group protein EMBRYONIC FLOWER chr5 3887150-3878756 E EGN_Mt100125 20111014	GO:0006349|regulation of gene expression by genetic imprinting GO:0009910|negative regulation of flower development GO:0010048|vernalization response GO:0016571|histone methylation	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_01200	R	R	NA	NA	POPTR_0001s11750	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01201	A	A1S	Potri.001G080000	Potri.001G080000(AS)	POPTR_0001s11760	sp|Q43804|OLEO1_PRUDU	Oleosin 1 OS=Prunus dulcis GN=OLE1 PE=2 SV=1	AT4G25140.1	| Symbols: OLEO1, OLE1 | oleosin 1 | chr4:12900498-12901259 FORWARD LENGTH=173	LOC_Os04g46200.1	protein|oleosin, putative, expressed	IMGA|Medtr1g090250.1	Oleosin chr1 24885928-24885225 F EGN_Mt100125 20111014	GO:0006406|mRNA export from nucleus GO:0006606|protein import into nucleus GO:0009640|photomorphogenesis GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009909|regulation of flower development GO:0009933|meristem structural organization GO:0010162|seed dormancy process GO:0010182|sugar mediated signaling pathway GO:0010228|vegetative to reproductive phase transition of meristem GO:0010344|seed oilbody biogenesis GO:0016567|protein ubiquitination GO:0019915|lipid storage GO:0050826|response to freezing	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0016020|membrane
pt2_01202	A	A1S	Potri.001G079900	Potri.001G079900(AS)	POPTR_0001s11770	sp|Q40479|ERF2_TOBAC	Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum GN=ERF2 PE=2 SV=1	AT4G17500.1	| Symbols: ATERF-1, ERF-1 | ethylene responsive element binding factor 1 | chr4:9759405-9760211 FORWARD LENGTH=268	LOC_Os02g43790.1	protein|ethylene-responsive transcription factor, putative, expressed	IMGA|AC233556_27.1	Ethylene-responsive transcription factor AC233556.3 105457-106057 H EGN_Mt100125 20111014	GO:0002679|respiratory burst involved in defense response GO:0006355|regulation of transcription, DNA-dependent GO:0009414|response to water deprivation GO:0009723|response to ethylene stimulus GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009873|ethylene mediated signaling pathway GO:0010200|response to chitin GO:0035556|intracellular signal transduction GO:0042538|hyperosmotic salinity response GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus GO:0005643|nuclear pore
pt2_01203	A	A1S	Potri.001G079800	Potri.001G079800(AS)	POPTR_0001s11780	sp|Q8VY90|EF105_ARATH	Ethylene-responsive transcription factor ERF105 OS=Arabidopsis thaliana GN=ERF105 PE=2 SV=1	AT5G51190.1	| Symbols: | Integrase-type DNA-binding superfamily protein | chr5:20800708-20801373 REVERSE LENGTH=221	LOC_Os04g46240.1	protein|AP2 domain containing protein, expressed	IMGA|AC233556_27.1	Ethylene-responsive transcription factor AC233556.3 105457-106057 H EGN_Mt100125 20111014	GO:0002679|respiratory burst involved in defense response GO:0006355|regulation of transcription, DNA-dependent GO:0009611|response to wounding GO:0009612|response to mechanical stimulus GO:0010200|response to chitin GO:0035556|intracellular signal transduction	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_01204	C	C1S	Potri.001G079700	Potri.001G079700(CS)	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0008270|zinc ion binding	GO:0005575|cellular_component
pt2_01205	A	A1S	Potri.001G079600	Potri.001G079600(AS)	POPTR_0001s11800	sp|Q9LY05|EF106_ARATH	Ethylene-responsive transcription factor ERF106 OS=Arabidopsis thaliana GN=ERF106 PE=2 SV=1	AT5G07580.1	| Symbols: | Integrase-type DNA-binding superfamily protein | chr5:2399525-2400349 FORWARD LENGTH=274	LOC_Os04g46240.1	protein|AP2 domain containing protein, expressed	IMGA|AC233556_27.1	Ethylene-responsive transcription factor AC233556.3 105457-106057 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009873|ethylene mediated signaling pathway	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_01206	C	C1S	Potri.001G079500	Potri.001G079500(CS)	sp|Q9FKG3|K6PF4_ARATH	6-phosphofructokinase 4, chloroplastic OS=Arabidopsis thaliana GN=PFK4 PE=1 SV=1	AT5G61580.2	| Symbols: PFK4 | phosphofructokinase 4 | chr5:24761150-24763827 FORWARD LENGTH=529	LOC_Os01g09570.1	protein|6-phosphofructokinase, putative, expressed	IMGA|AC233556_26.1	6-phosphofructokinase AC233556.3 96863-104424 H EGN_Mt100125 20111014	GO:0006096|glycolysis	GO:0003872|6-phosphofructokinase activity GO:0005524|ATP binding	GO:0005945|6-phosphofructokinase complex GO:0009507|chloroplast
pt2_01207	C	C1S	Potri.001G079500	Potri.001G079500(CS)	sp|Q9FKG3|K6PF4_ARATH	6-phosphofructokinase 4, chloroplastic OS=Arabidopsis thaliana GN=PFK4 PE=1 SV=1	AT5G61580.2	| Symbols: PFK4 | phosphofructokinase 4 | chr5:24761150-24763827 FORWARD LENGTH=529	LOC_Os01g09570.1	protein|6-phosphofructokinase, putative, expressed	IMGA|AC233556_26.1	6-phosphofructokinase AC233556.3 96863-104424 H EGN_Mt100125 20111014	GO:0006096|glycolysis	GO:0003872|6-phosphofructokinase activity GO:0005524|ATP binding	GO:0005945|6-phosphofructokinase complex GO:0009507|chloroplast
pt2_01208	G	G1	NA	NA	POPTR_0001s11810	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01209	A	A1S	Potri.001G079400	Potri.001G079400(AS)	POPTR_0001s11820	sp|Q08448|YO059_YEAST	Putative lipase YOR059C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOR059C PE=1 SV=1	AT5G51180.2	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr5:20797360-20799929 FORWARD LENGTH=357	LOC_Os08g04810.1	protein|serine esterase family protein, putative, expressed	NA	NA	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_01210	G	G1	NA	NA	POPTR_0001s11825	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01211	A	A1S	Potri.001G079300	Potri.001G079300(AS)	POPTR_0001s11830	sp|O22161|ADLO1_ARATH	Protein ARABIDILLO 1 OS=Arabidopsis thaliana GN=FBX5 PE=1 SV=1	AT2G44900.1	| Symbols: ARABIDILLO-1, ARABIDILLO1 | ARABIDILLO-1 | chr2:18511719-18515762 REVERSE LENGTH=930	LOC_Os10g41360.1	protein|ARABIDILLO-1, putative, expressed	IMGA|contig_49679_2.1	U-box domain-containing protein contig_49679 4807-2474 E PREDN 20111014	GO:0048527|lateral root development	GO:0004842|ubiquitin-protein ligase activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_01212	A	A1S	Potri.001G079100	Potri.001G079100(AS)	POPTR_0001s11850	sp|Q9P2S5|WRP73_HUMAN	WD repeat-containing protein WRAP73 OS=Homo sapiens GN=WRAP73 PE=2 SV=1	AT5G07590.1	| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr5:2401712-2403731 REVERSE LENGTH=458	LOC_Os10g41370.1	protein|WD repeat-containing protein 8, putative, expressed	IMGA|Medtr1g090310.1	WD-repeat protein chr1 24915696-24910493 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005737|cytoplasm GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_01213	A	A1S	Potri.001G079000	Potri.001G079000(AS)	POPTR_0001s11860	sp|Q8RWS6|FRO6_ARATH	Ferric reduction oxidase 6 OS=Arabidopsis thaliana GN=FRO6 PE=2 SV=1	AT5G49730.1	| Symbols: ATFRO6, FRO6 | ferric reduction oxidase 6 | chr5:20201355-20204455 REVERSE LENGTH=738	LOC_Os04g36720.1	protein|ferric-chelate reductase, putative, expressed	IMGA|Medtr1g100130.1	Ferric-chelate reductase chr1 29126613-29132846 E EGN_Mt100125 20111014	GO:0009416|response to light stimulus GO:0009767|photosynthetic electron transport chain GO:0055114|oxidation-reduction process	GO:0000293|ferric-chelate reductase activity GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016491|oxidoreductase activity GO:0050660|flavin adenine dinucleotide binding	GO:0005634|nucleus GO:0005886|plasma membrane GO:0009507|chloroplast GO:0016020|membrane GO:0016021|integral to membrane
pt2_01214	A	A1S	Potri.001G079000	Potri.001G079000(AS)	POPTR_0001s11860	sp|Q8RWS6|FRO6_ARATH	Ferric reduction oxidase 6 OS=Arabidopsis thaliana GN=FRO6 PE=2 SV=1	AT5G49730.1	| Symbols: ATFRO6, FRO6 | ferric reduction oxidase 6 | chr5:20201355-20204455 REVERSE LENGTH=738	LOC_Os04g36720.1	protein|ferric-chelate reductase, putative, expressed	IMGA|Medtr1g100130.1	Ferric-chelate reductase chr1 29126613-29132846 E EGN_Mt100125 20111014	GO:0009416|response to light stimulus GO:0009767|photosynthetic electron transport chain GO:0055114|oxidation-reduction process	GO:0000293|ferric-chelate reductase activity GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016491|oxidoreductase activity GO:0050660|flavin adenine dinucleotide binding	GO:0005634|nucleus GO:0005886|plasma membrane GO:0009507|chloroplast GO:0016020|membrane GO:0016021|integral to membrane
pt2_01215	A	A1S	Potri.001G079000	Potri.001G079000(AS)	POPTR_0001s11860	sp|Q8RWS6|FRO6_ARATH	Ferric reduction oxidase 6 OS=Arabidopsis thaliana GN=FRO6 PE=2 SV=1	AT5G49730.1	| Symbols: ATFRO6, FRO6 | ferric reduction oxidase 6 | chr5:20201355-20204455 REVERSE LENGTH=738	LOC_Os04g36720.1	protein|ferric-chelate reductase, putative, expressed	IMGA|Medtr1g100130.1	Ferric-chelate reductase chr1 29126613-29132846 E EGN_Mt100125 20111014	GO:0009416|response to light stimulus GO:0009767|photosynthetic electron transport chain GO:0055114|oxidation-reduction process	GO:0000293|ferric-chelate reductase activity GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016491|oxidoreductase activity GO:0050660|flavin adenine dinucleotide binding	GO:0005634|nucleus GO:0005886|plasma membrane GO:0009507|chloroplast GO:0016020|membrane GO:0016021|integral to membrane
pt2_01216	A	A1S	Potri.001G079000	Potri.001G079000(AS)	POPTR_0001s11860	sp|Q8RWS6|FRO6_ARATH	Ferric reduction oxidase 6 OS=Arabidopsis thaliana GN=FRO6 PE=2 SV=1	AT5G49730.1	| Symbols: ATFRO6, FRO6 | ferric reduction oxidase 6 | chr5:20201355-20204455 REVERSE LENGTH=738	LOC_Os04g36720.1	protein|ferric-chelate reductase, putative, expressed	IMGA|Medtr1g100130.1	Ferric-chelate reductase chr1 29126613-29132846 E EGN_Mt100125 20111014	GO:0009416|response to light stimulus GO:0009767|photosynthetic electron transport chain GO:0055114|oxidation-reduction process	GO:0000293|ferric-chelate reductase activity GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016491|oxidoreductase activity GO:0050660|flavin adenine dinucleotide binding	GO:0005634|nucleus GO:0005886|plasma membrane GO:0009507|chloroplast GO:0016020|membrane GO:0016021|integral to membrane
pt2_01217	A	A2S	Potri.001G078900	Potri.001G078900(AS) Potri.003G151700(DS)	POPTR_0001s11870	sp|Q38890|GUN25_ARATH	Endoglucanase 25 OS=Arabidopsis thaliana GN=KOR PE=1 SV=1	AT5G49720.1	| Symbols: ATGH9A1, TSD1, DEC, KOR, RSW2, IRX2, KOR1, GH9A1 | glycosyl hydrolase 9A1 | chr5:20197765-20200168 REVERSE LENGTH=621	LOC_Os03g21210.1	protein|endoglucanase, putative, expressed	IMGA|Medtr5g085730.1	Endoglucanase chr5 36028973-36032829 E EGN_Mt100125 20111014	GO:0000271|polysaccharide biosynthetic process GO:0000902|cell morphogenesis GO:0005975|carbohydrate metabolic process GO:0006096|glycolysis GO:0006833|water transport GO:0006972|hyperosmotic response GO:0007030|Golgi organization GO:0009266|response to temperature stimulus GO:0009651|response to salt stress GO:0009734|auxin mediated signaling pathway GO:0009735|response to cytokinin stimulus GO:0009750|response to fructose stimulus GO:0009825|multidimensional cell growth GO:0009826|unidimensional cell growth GO:0009932|cell tip growth GO:0010193|response to ozone GO:0010817|regulation of hormone levels GO:0016049|cell growth GO:0016051|carbohydrate biosynthetic process GO:0019344|cysteine biosynthetic process GO:0030243|cellulose metabolic process GO:0030244|cellulose biosynthetic process GO:0032880|regulation of protein localization GO:0042538|hyperosmotic salinity response GO:0042744|hydrogen peroxide catabolic process GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0043622|cortical microtubule organization GO:0046686|response to cadmium ion GO:0048193|Golgi vesicle transport GO:0048367|shoot development GO:0048765|root hair cell differentiation GO:0048767|root hair elongation GO:0071555|cell wall organization	GO:0003824|catalytic activity GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0008810|cellulase activity	GO:0005768|endosome GO:0005769|early endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0005886|plasma membrane GO:0009504|cell plate
pt2_01218	A	A1S	Potri.001G078800	Potri.001G078800(AS)	POPTR_0001s11880	sp|Q94KB2|MLO13_ARATH	MLO-like protein 13 OS=Arabidopsis thaliana GN=MLO13 PE=2 SV=1	AT4G24250.1	| Symbols: MLO13, ATMLO13 | Seven transmembrane MLO family protein | chr4:12575008-12577517 REVERSE LENGTH=478	LOC_Os01g66510.1	protein|MLO domain containing protein, putative, expressed	IMGA|Medtr5g024700.1	Mlo family protein chr5 9668004-9673094 H EGN_Mt100125 20111014	GO:0006952|defense response GO:0008219|cell death	GO:0005516|calmodulin binding	GO:0005886|plasma membrane GO:0016021|integral to membrane
pt2_01219	A	A1S	Potri.001G078700	Potri.001G078700(AS)	POPTR_0001s11890	NA	NA	AT2G02370.2	| Symbols: | SNARE associated Golgi protein family | chr2:621841-623084 FORWARD LENGTH=320	LOC_Os03g25750.1	protein|SNARE associated Golgi protein, putative, expressed	IMGA|Medtr5g011420.1	TVP38/TMEM64 family membrane protein slr0305 chr5 3031173-3029607 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005886|plasma membrane
pt2_01220	A	A1S	Potri.001G078600	Potri.001G078600(AS)	POPTR_0001s11900	sp|Q9Z0W3|NU160_MOUSE	Nuclear pore complex protein Nup160 OS=Mus musculus GN=Nup160 PE=1 SV=2	AT1G33410.2	| Symbols: SAR1 | SUPPRESSOR OF AUXIN RESISTANCE1 | chr1:12109769-12118828 REVERSE LENGTH=1504	LOC_Os02g04970.1	protein|expressed protein	NA	NA	GO:0006406|mRNA export from nucleus GO:0006606|protein import into nucleus GO:0009733|response to auxin stimulus GO:0009909|regulation of flower development GO:0010074|maintenance of meristem identity GO:0016570|histone modification GO:0032502|developmental process GO:0048449|floral organ formation	GO:0005515|protein binding	GO:0005634|nucleus GO:0005635|nuclear envelope GO:0031965|nuclear membrane
pt2_01221	C	C1S	Potri.001G078500	Potri.001G078500(CS)	sp|Q8GWR0|COX11_ARATH	Cytochrome c oxidase assembly protein COX11, mitochondrial OS=Arabidopsis thaliana GN=COX11 PE=2 SV=1	AT1G02410.1	| Symbols: | cytochrome c oxidase assembly protein CtaG / Cox11 family | chr1:491300-492762 FORWARD LENGTH=287	LOC_Os03g50940.1	protein|cytochrome c oxidase assembly protein COX11, mitochondrial precursor, putative, expressed	NA	NA	GO:0008150|biological_process GO:0019243|methylglyoxal catabolic process to D-lactate	GO:0005507|copper ion binding	GO:0009507|chloroplast
pt2_01222	A	A1S	Potri.001G078400	Potri.001G078400(AS)	POPTR_0001s11920	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01223	A	A1S	Potri.001G078300	Potri.001G078300(AS)	POPTR_0001s11930	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01224	C	C1S	Potri.001G078200	Potri.001G078200(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01225	A	A1S	Potri.001G078100	Potri.001G078100(AS)	POPTR_0001s11950	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01226	A	A1S	Potri.001G077900	Potri.001G077900(AS)	POPTR_0001s11960	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01227	A	A2S	Potri.001G077700	Potri.001G077700(AS) Potri.001G077800(AA)	POPTR_0001s11970	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01228	A	A1S	Potri.001G077800	Potri.001G077800(AS)	POPTR_0001s11980	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01229	A	A1S	Potri.001G077600	Potri.001G077600(AS)	POPTR_0001s11990	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01230	A	A1S	Potri.001G077600	Potri.001G077600(AS)	POPTR_0001s11990	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01231	A	A1S	Potri.001G077600	Potri.001G077600(AS)	POPTR_0001s11990	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01232	A	A1S	Potri.001G077500	Potri.001G077500(AS)	POPTR_0001s12000	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01233	A	A1S	Potri.001G077400	Potri.001G077400(AS)	POPTR_0001s12010	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01234	A	A1S	Potri.T154300	Potri.T154300(AS)	POPTR_0001s12020	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01235	A	A2S	Potri.T154400	Potri.T154400(AS) Potri.001G077200(DS)	POPTR_0001s12030	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01236	A	A2S	Potri.001G077100	Potri.001G077100(AS) Potri.T154500(BS)	POPTR_0001s12040	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01237	A	A1S	Potri.T154600	Potri.T154600(AS)	POPTR_0001s12070	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01238	B	B1S	Potri.001G076900	Potri.001G076900(BS)	POPTR_0001s12080	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01239	A	A1S	Potri.001G076800	Potri.001G076800(AS)	POPTR_0001s12090	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01240	C	C2S	Potri.T154600	Potri.T154600(CS) Potri.001G077000(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01241	A	A1S	Potri.001G076700	Potri.001G076700(AS)	POPTR_0001s12110	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01242	A	A1S	Potri.001G076600	Potri.001G076600(AS)	POPTR_0001s12120	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01243	A	A1S	Potri.001G076500	Potri.001G076500(AS)	POPTR_0001s12140	NA	NA	NA	NA	NA	NA	NA	NA	GO:0007093|mitotic cell cycle checkpoint GO:0009630|gravitropism	NA	GO:0005634|nucleus GO:0005635|nuclear envelope
pt2_01244	A	A1S	Potri.001G076400	Potri.001G076400(AS)	POPTR_0001s12150	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01245	A	A1S	Potri.001G076400	Potri.001G076400(AS)	POPTR_0001s12150	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01246	A	A1S	Potri.001G076400	Potri.001G076400(AS)	POPTR_0001s12150	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01247	A	A1S	Potri.001G076300	Potri.001G076300(AS)	POPTR_0001s12160	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01248	A	A1S	Potri.001G076200	Potri.001G076200(AS)	POPTR_0001s12170	sp|Q32L81|TAM41_BOVIN	Mitochondrial translocator assembly and maintenance protein 41 homolog OS=Bos taurus GN=TAMM41 PE=2 SV=1	AT3G47630.2	| Symbols: | CONTAINS InterPro DOMAIN/s: Mitochondrial matrix Mmp37 (InterPro:IPR015222); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr3:17563254-17565162 REVERSE LENGTH=332	LOC_Os11g34840.1	protein|MMP37-like protein, mitochondrial precursor, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_01249	A	A1S	Potri.001G076100	Potri.001G076100(AS)	POPTR_0001s12180	sp|O64759|CAAT5_ARATH	Cationic amino acid transporter 5 OS=Arabidopsis thaliana GN=CAT5 PE=1 SV=1	AT2G34960.1	| Symbols: CAT5 | cationic amino acid transporter 5 | chr2:14744175-14745884 REVERSE LENGTH=569	LOC_Os01g11160.1	protein|amino acid permease family protein, putative, expressed	NA	NA	GO:0003333|amino acid transmembrane transport GO:0043091|L-arginine import GO:0051938|L-glutamate import	GO:0005313|L-glutamate transmembrane transporter activity GO:0015171|amino acid transmembrane transporter activity GO:0015181|arginine transmembrane transporter activity GO:0015189|L-lysine transmembrane transporter activity GO:0015326|cationic amino acid transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_01250	A	A1S	Potri.001G075900	Potri.001G075900(AS)	POPTR_0001s12190	sp|O49436|PP327_ARATH	Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana GN=EMB1025 PE=2 SV=1	AT4G20090.1	| Symbols: EMB1025 | Pentatricopeptide repeat (PPR) superfamily protein | chr4:10868400-10870382 REVERSE LENGTH=660	LOC_Os06g30420.1	protein|PPR repeat domain containing protein, putative, expressed	IMGA|Medtr5g090170.1	Auxin response factor chr5 38240367-38247794 E EGN_Mt100125 20111014	GO:0009793|embryo development ending in seed dormancy	NA	GO:0005739|mitochondrion
pt2_01251	A	A1S	Potri.001G075800	Potri.001G075800(AS)	POPTR_0001s12200	sp|Q7Y211|PP285_ARATH	Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2 SV=2	AT3G57430.1	| Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:21255731-21258403 REVERSE LENGTH=890	LOC_Os04g02850.1	protein|pentatricopeptide, putative, expressed	IMGA|Medtr1g071240.1	Pentatricopeptide repeat-containing protein chr1 17511913-17505644 H EGN_Mt100125 20111014	GO:0031425|chloroplast RNA processing	NA	GO:0009507|chloroplast
pt2_01252	A	A1S	Potri.001G075700	Potri.001G075700(AS)	POPTR_0001s12210	NA	NA	AT4G20090.1	| Symbols: EMB1025 | Pentatricopeptide repeat (PPR) superfamily protein | chr4:10868400-10870382 REVERSE LENGTH=660	LOC_Os01g43010.2	protein|transposon protein, putative, unclassified, expressed	NA	NA	GO:0009793|embryo development ending in seed dormancy	NA	GO:0005739|mitochondrion
pt2_01253	A	A1S	Potri.001G075600	Potri.001G075600(AS)	POPTR_0001s12220	sp|Q9FYH7|VSR6_ARATH	Vacuolar-sorting receptor 6 OS=Arabidopsis thaliana GN=VSR6 PE=2 SV=3	AT1G30900.1	| Symbols: VSR6, VSR3;3, BP80-3;3 | VACUOLAR SORTING RECEPTOR 6 | chr1:10997275-11000543 FORWARD LENGTH=631	LOC_Os06g45380.1	protein|vacuolar-sorting receptor precursor, putative, expressed	IMGA|Medtr5g005100.1	Vacuolar-sorting receptor chr5 44556-48812 E EGN_Mt100125 20111014	GO:0006623|protein targeting to vacuole GO:0009627|systemic acquired resistance GO:0009697|salicylic acid biosynthetic process GO:0009744|response to sucrose stimulus GO:0009749|response to glucose stimulus GO:0009750|response to fructose stimulus GO:0034976|response to endoplasmic reticulum stress	GO:0005509|calcium ion binding	GO:0005794|Golgi apparatus GO:0005887|integral to plasma membrane GO:0017119|Golgi transport complex
pt2_01254	A	A1S	Potri.001G075500	Potri.001G075500(AS)	POPTR_0001s12230	sp|Q9SCY2|FKB13_ARATH	Peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic OS=Arabidopsis thaliana GN=FKBP13 PE=1 SV=2	AT5G45680.1	| Symbols: ATFKBP13, FKBP13 | FK506-binding protein 13 | chr5:18530894-18532128 FORWARD LENGTH=208	LOC_Os06g45340.1	protein|peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed	IMGA|Medtr5g008680.1	FK506-binding protein chr5 1630949-1635538 F EGN_Mt100125 20111014	GO:0006457|protein folding GO:0006636|unsaturated fatty acid biosynthetic process GO:0010103|stomatal complex morphogenesis GO:0015995|chlorophyll biosynthetic process GO:0016117|carotenoid biosynthetic process GO:0018208|peptidyl-proline modification GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway	GO:0003755|peptidyl-prolyl cis-trans isomerase activity GO:0005515|protein binding GO:0005528|FK506 binding	GO:0009507|chloroplast GO:0009543|chloroplast thylakoid lumen GO:0016020|membrane GO:0031977|thylakoid lumen
pt2_01255	B	B1S	Potri.001G075400	Potri.001G075400(BS)	POPTR_0001s12240	sp|Q8LPH6|MYB86_ARATH	Transcription factor MYB86 OS=Arabidopsis thaliana GN=MYB86 PE=2 SV=1	AT3G12720.1	| Symbols: ATY53, ATMYB67, MYB67 | myb domain protein 67 | chr3:4043407-4044522 REVERSE LENGTH=307	LOC_Os07g31470.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr5g029840.1	Myb-like transcription factor chr5 12304553-12305846 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_01256	C	C1S	Potri.001G075300	Potri.001G075300(CS)	sp|Q58DC2|DCAF4_BOVIN	DDB1- and CUL4-associated factor 4 OS=Bos taurus GN=DCAF4 PE=2 SV=1	AT5G17370.1	| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr5:5721801-5724719 REVERSE LENGTH=529	LOC_Os07g01730.1	protein|WD-40 repeat family protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005737|cytoplasm GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_01257	A	A1S	Potri.001G075300	Potri.001G075300(AS)	POPTR_0001s12260	sp|Q58DC2|DCAF4_BOVIN	DDB1- and CUL4-associated factor 4 OS=Bos taurus GN=DCAF4 PE=2 SV=1	AT5G17370.1	| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr5:5721801-5724719 REVERSE LENGTH=529	LOC_Os07g01730.1	protein|WD-40 repeat family protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005737|cytoplasm GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_01258	A	A1S	Potri.001G075200	Potri.001G075200(AS)	POPTR_0001s12270	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01259	A	A1S	Potri.001G075100	Potri.001G075100(AS)	POPTR_0001s12275	sp|Q9SY33|PER7_ARATH	Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 SV=1	AT1G30870.1	| Symbols: | Peroxidase superfamily protein | chr1:10991535-10992885 FORWARD LENGTH=349	LOC_Os07g31610.1	protein|peroxidase precursor, putative, expressed	IMGA|Medtr5g021060.1	Peroxidase chr5 7821272-7822903 F EGN_Mt100125 20111014	GO:0006979|response to oxidative stress GO:0010054|trichoblast differentiation GO:0055114|oxidation-reduction process	GO:0004601|peroxidase activity GO:0020037|heme binding	GO:0005576|extracellular region
pt2_01260	A	A1S	Potri.001G075000	Potri.001G075000(AS)	POPTR_0001s12290	sp|C0LGQ5|GSO1_ARATH	LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1	AT4G20140.1	| Symbols: GSO1 | Leucine-rich repeat transmembrane protein kinase | chr4:10884220-10888045 FORWARD LENGTH=1249	LOC_Os07g31500.1	protein|leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed	IMGA|contig_79827_1.1	Receptor-like kinase contig_79827 4333-168 H PREDN 20111014	GO:0006468|protein phosphorylation GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway GO:0008544|epidermis development GO:0009790|embryo development	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	NA
pt2_01261	A	A1S	Potri.001G074900	Potri.001G074900(AS)	POPTR_0001s12300	NA	NA	AT4G20150.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plasma membrane, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:10888529-10889500 REVERSE LENGTH=81	LOC_Os07g31490.1	protein|expressed protein	NA	NA	GO:0006096|glycolysis GO:0006511|ubiquitin-dependent protein catabolic process GO:0008150|biological_process GO:0009060|aerobic respiration GO:0009853|photorespiration GO:0046686|response to cadmium ion GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0005747|mitochondrial respiratory chain complex I GO:0005774|vacuolar membrane GO:0009507|chloroplast
pt2_01262	A	A1S	Potri.001G074800	Potri.001G074800(AS)	POPTR_0001s12310	NA	NA	AT1G30860.1	| Symbols: | RING/U-box superfamily protein | chr1:10986696-10989246 REVERSE LENGTH=730	NA	NA	IMGA|contig_51431_1.1	Unknown protein contig_51431 194-5641 H PREDN 20111014	GO:0048610|cellular process involved in reproduction GO:0048868|pollen tube development	NA	GO:0005634|nucleus GO:0009507|chloroplast
pt2_01263	A	A1S	Potri.001G074700	Potri.001G074700(AS)	POPTR_0001s12320	sp|Q7VG78|GUAA_HELHP	Probable GMP synthase [glutamine-hydrolyzing] OS=Helicobacter hepaticus (strain ATCC 51449 / 3B1) GN=guaA PE=3 SV=1	AT5G44680.1	| Symbols: | DNA glycosylase superfamily protein | chr5:18024461-18025893 REVERSE LENGTH=353	LOC_Os01g58550.1	protein|methyladenine glycosylase, putative, expressed	IMGA|contig_87360_1.1	DNA-3-methyladenine glycosylase I contig_87360 1893-326 F PREDN 20111014	GO:0006281|DNA repair GO:0006284|base-excision repair GO:0009637|response to blue light GO:0010155|regulation of proton transport GO:0046777|protein autophosphorylation	GO:0003824|catalytic activity GO:0008725|DNA-3-methyladenine glycosylase activity	GO:0005634|nucleus
pt2_01264	A	A1S	Potri.001G074600	Potri.001G074600(AS)	POPTR_0001s12330	NA	NA	AT5G44670.1	| Symbols: | Domain of unknown function (DUF23) | chr5:18019209-18021266 REVERSE LENGTH=519	LOC_Os06g22330.1	protein|expressed protein	IMGA|contig_8834_1.1	Unknown protein contig_8834 2335-1041 E PREDN 20111014	GO:0008150|biological_process	NA	GO:0005737|cytoplasm GO:0005773|vacuole
pt2_01265	A	A1S	Potri.001G074500	Potri.001G074500(AS)	POPTR_0001s12340	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01266	R	R	NA	NA	POPTR_0001s12350	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01267	D	D1S	Potri.001G074200	Potri.001G074200(DS)	POPTR_0001s12360	NA	NA	AT5G44650.1	| Symbols: CEST, AtCEST | Encodes a chloroplast protein that induces tolerance to multiple environmental stresses and reduces photooxidative damage. | chr5:18013396-18015292 FORWARD LENGTH=280	LOC_Os01g58470.1	protein|expressed protein	NA	NA	GO:0009414|response to water deprivation GO:0009658|chloroplast organization GO:0010286|heat acclimation GO:0042538|hyperosmotic salinity response GO:0048564|photosystem I assembly GO:0080183|response to photooxidative stress	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009579|thylakoid
pt2_01268	A	A1S	Potri.001G074100	Potri.001G074100(AS)	POPTR_0001s12370	sp|Q9SY29|PUP4_ARATH	Probable purine permease 4 OS=Arabidopsis thaliana GN=PUP4 PE=2 SV=1	AT1G30840.2	| Symbols: PUP4 | purine permease 4 | chr1:10974581-10975729 FORWARD LENGTH=382	LOC_Os01g48800.1	protein|purine permease, putative, expressed	IMGA|Medtr5g065080.1	Purine permease chr5 26371801-26373742 H EGN_Mt100125 20111014	GO:0006863|purine nucleobase transport GO:0015931|nucleobase-containing compound transport	GO:0005345|purine nucleobase transmembrane transporter activity	GO:0016020|membrane
pt2_01269	A	A1S	Potri.001G074000	Potri.001G074000(AS)	POPTR_0001s12380	sp|Q7Q0Q1|MCM6_ANOGA	DNA replication licensing factor Mcm6 OS=Anopheles gambiae GN=Mcm6 PE=3 SV=3	AT5G44635.1	| Symbols: MCM6 | minichromosome maintenance (MCM2/3/5) family protein | chr5:18006431-18010542 REVERSE LENGTH=831	LOC_Os05g14590.1	protein|MCM6 - Putative minichromosome maintenance MCM complex subunit 6, expressed	NA	NA	GO:0006260|DNA replication GO:0006268|DNA unwinding involved in replication GO:0006270|DNA replication initiation GO:0008283|cell proliferation	GO:0003677|DNA binding GO:0005515|protein binding GO:0005524|ATP binding GO:0008094|DNA-dependent ATPase activity	GO:0000790|nuclear chromatin GO:0005634|nucleus
pt2_01270	A	A2S	Potri.001G073900	Potri.001G073900(AS) Potri.003G157100(BS)	POPTR_0001s12390	sp|Q0JPA6|SRS1_ORYSJ	Salt stress root protein RS1 OS=Oryza sativa subsp. japonica GN=Os01g0233000 PE=2 SV=1	AT4G20260.5	| Symbols: PCAP1 | plasma-membrane associated cation-binding protein 1 | chr4:10941593-10943120 FORWARD LENGTH=167	LOC_Os02g18410.1	protein|salt stress root protein RS1, putative, expressed	NA	NA	GO:0006499|N-terminal protein myristoylation GO:0006816|calcium ion transport GO:0006970|response to osmotic stress GO:0007030|Golgi organization GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009651|response to salt stress GO:0010350|cellular response to magnesium starvation GO:0018008|N-terminal peptidyl-glycine N-myristoylation GO:0031115|negative regulation of microtubule polymerization GO:0031117|positive regulation of microtubule depolymerization GO:0035865|cellular response to potassium ion GO:0042742|defense response to bacterium GO:0043622|cortical microtubule organization GO:0046686|response to cadmium ion GO:0048767|root hair elongation GO:0051511|negative regulation of unidimensional cell growth GO:0051592|response to calcium ion GO:0071219|cellular response to molecule of bacterial origin GO:0071280|cellular response to copper ion GO:0071281|cellular response to iron ion GO:0071286|cellular response to magnesium ion GO:0071325|cellular response to mannitol stimulus GO:0071472|cellular response to salt stress GO:0072709|cellular response to sorbitol GO:0075733|intracellular transport of viral material	GO:0005507|copper ion binding GO:0005509|calcium ion binding GO:0005515|protein binding GO:0005516|calmodulin binding GO:0005546|phosphatidylinositol-4,5-bisphosphate binding GO:0005547|phosphatidylinositol-3,4,5-trisphosphate binding GO:0008017|microtubule binding GO:0043325|phosphatidylinositol-3,4-bisphosphate binding GO:0080025|phosphatidylinositol-3,5-bisphosphate binding	GO:0005773|vacuole GO:0005881|cytoplasmic microtubule GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0009507|chloroplast GO:0046658|anchored to plasma membrane
pt2_01271	A	A1S	Potri.001G073800	Potri.001G073800(AS)	POPTR_0001s12400	sp|Q84XV2|GTE1_ARATH	Transcription factor GTE1 OS=Arabidopsis thaliana GN=GTE1 PE=2 SV=1	AT2G34900.1	| Symbols: GTE01, IMB1, GTE1 | Transcription factor GTE6 | chr2:14723333-14725562 REVERSE LENGTH=386	LOC_Os06g04640.1	protein|bromodomain domain containing protein, expressed	IMGA|Medtr5g069490.1	Bromodomain-containing protein chr5 28476109-28480567 H EGN_Mt100125 20111014	GO:0000398|mRNA splicing, via spliceosome GO:0009560|embryo sac egg cell differentiation GO:0010030|positive regulation of seed germination GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003677|DNA binding	GO:0005634|nucleus
pt2_01272	A	A1S	Potri.001G073700	Potri.001G073700(AS)	POPTR_0001s12410	sp|Q9Y5N5|HEMK2_HUMAN	HemK methyltransferase family member 2 OS=Homo sapiens GN=N6AMT1 PE=1 SV=3	AT3G13440.1	| Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr3:4378338-4379347 FORWARD LENGTH=278	LOC_Os03g60920.1	protein|Methyltransferase small domain containing protein, expressed	NA	NA	GO:0015946|methanol oxidation GO:0019415|acetate biosynthetic process from carbon monoxide GO:0032259|methylation	GO:0003676|nucleic acid binding GO:0008168|methyltransferase activity	GO:0005737|cytoplasm
pt2_01273	A	A1S	Potri.001G073600	Potri.001G073600(AS)	POPTR_0001s12420	sp|O65440|BAME3_ARATH	Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 OS=Arabidopsis thaliana GN=BAM3 PE=2 SV=3	AT4G20270.1	| Symbols: BAM3 | Leucine-rich receptor-like protein kinase family protein | chr4:10949822-10952924 FORWARD LENGTH=992	LOC_Os03g56270.2	protein|receptor protein kinase CLAVATA1 precursor, putative, expressed	IMGA|Medtr5g090100.1	Receptor-like protein kinase chr5 38189654-38185879 E EGN_Mt100125 20111014	GO:0000271|polysaccharide biosynthetic process GO:0006468|protein phosphorylation GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway GO:0009825|multidimensional cell growth GO:0009855|determination of bilateral symmetry GO:0009932|cell tip growth GO:0010014|meristem initiation GO:0010073|meristem maintenance GO:0010075|regulation of meristem growth GO:0010817|regulation of hormone levels GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0048437|floral organ development GO:0048653|anther development GO:0048767|root hair elongation GO:0071555|cell wall organization	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_01274	A	A1S	Potri.001G073500	Potri.001G073500(AS)	POPTR_0001s12430	sp|Q54XM9|TAF11_DICDI	Transcription initiation factor TFIID subunit 11 OS=Dictyostelium discoideum GN=taf11 PE=3 SV=1	AT4G20280.1	| Symbols: TAF11 | TBP-associated factor 11 | chr4:10953792-10954664 FORWARD LENGTH=210	LOC_Os01g48810.1	protein|transcription initiation factor TFIID subunit 11, putative, expressed	IMGA|contig_102913_1.1	Transcription initiation factor TFIID subunit contig_102913 1347-219 E PREDN 20111014	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0006351|transcription, DNA-dependent GO:0006366|transcription from RNA polymerase II promoter GO:0006367|transcription initiation from RNA polymerase II promoter GO:0009086|methionine biosynthetic process	GO:0003677|DNA binding	GO:0005634|nucleus
pt2_01275	A	A1S	Potri.001G073400	Potri.001G073400(AS)	POPTR_0001s12440	NA	NA	AT4G20300.2	| Symbols: | Protein of unknown function (DUF1639) | chr4:10955813-10958865 FORWARD LENGTH=352	LOC_Os01g48830.2	protein|expressed protein	IMGA|Medtr5g055990.1	hypothetical protein chr5 22530878-22528382 I EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005739|mitochondrion
pt2_01276	A	A2S	Potri.001G073300	Potri.001G073300(AS) Potri.003G157700(DS)	POPTR_0001s12450	sp|Q8WTM6|ARPC2_CAEEL	Probable actin-related protein 2/3 complex subunit 2 OS=Caenorhabditis elegans GN=arx-4 PE=2 SV=1	AT1G30825.1	| Symbols: ARPC2A, DIS2 | Arp2/3 complex, 34 kD subunit p34-Arc | chr1:10961106-10962999 FORWARD LENGTH=318	LOC_Os01g46580.1	protein|actin-related protein 2/3 complex subunit 2, putative, expressed	IMGA|Medtr1g045070.1	Actin-related protein 2/3 complex subunit chr1 13364911-13362376 H EGN_Mt100125 20111014	GO:0007015|actin filament organization GO:0010090|trichome morphogenesis GO:0030833|regulation of actin filament polymerization	GO:0005198|structural molecule activity	GO:0005856|cytoskeleton GO:0005885|Arp2/3 protein complex
pt2_01277	A	A2S	Potri.001G073300	Potri.001G073300(AS) Potri.003G157700(DS)	POPTR_0001s12450	sp|Q8WTM6|ARPC2_CAEEL	Probable actin-related protein 2/3 complex subunit 2 OS=Caenorhabditis elegans GN=arx-4 PE=2 SV=1	AT1G30825.1	| Symbols: ARPC2A, DIS2 | Arp2/3 complex, 34 kD subunit p34-Arc | chr1:10961106-10962999 FORWARD LENGTH=318	LOC_Os01g46580.1	protein|actin-related protein 2/3 complex subunit 2, putative, expressed	IMGA|Medtr1g045070.1	Actin-related protein 2/3 complex subunit chr1 13364911-13362376 H EGN_Mt100125 20111014	GO:0007015|actin filament organization GO:0010090|trichome morphogenesis GO:0030833|regulation of actin filament polymerization	GO:0005198|structural molecule activity	GO:0005856|cytoskeleton GO:0005885|Arp2/3 protein complex
pt2_01278	A	A2S	Potri.001G073300	Potri.001G073300(AS) Potri.003G157700(BS)	POPTR_0001s12450	sp|Q8WTM6|ARPC2_CAEEL	Probable actin-related protein 2/3 complex subunit 2 OS=Caenorhabditis elegans GN=arx-4 PE=2 SV=1	AT1G30825.1	| Symbols: ARPC2A, DIS2 | Arp2/3 complex, 34 kD subunit p34-Arc | chr1:10961106-10962999 FORWARD LENGTH=318	LOC_Os01g46580.1	protein|actin-related protein 2/3 complex subunit 2, putative, expressed	IMGA|Medtr1g045070.1	Actin-related protein 2/3 complex subunit chr1 13364911-13362376 H EGN_Mt100125 20111014	GO:0007015|actin filament organization GO:0010090|trichome morphogenesis GO:0030833|regulation of actin filament polymerization	GO:0005198|structural molecule activity	GO:0005856|cytoskeleton GO:0005885|Arp2/3 protein complex
pt2_01279	A	A1S	Potri.001G073200	Potri.001G073200(AS)	POPTR_0001s12460	NA	NA	AT4G20310.1	| Symbols: | Peptidase M50 family protein | chr4:10961639-10963283 FORWARD LENGTH=393	LOC_Os01g46590.1	protein|expressed protein	NA	NA	GO:0006508|proteolysis	GO:0004222|metalloendopeptidase activity	GO:0005739|mitochondrion GO:0016020|membrane
pt2_01280	A	A2S	Potri.001G073100	Potri.001G073100(AS) Potri.003G157900(DS)	POPTR_0001s12470	sp|Q54V77|PYRG_DICDI	CTP synthase OS=Dictyostelium discoideum GN=ctps PE=3 SV=1	AT1G30820.1	| Symbols: | CTP synthase family protein | chr1:10945251-10948825 REVERSE LENGTH=600	LOC_Os01g43020.1	protein|CTP synthase, putative, expressed	NA	NA	GO:0006221|pyrimidine nucleotide biosynthetic process GO:0009218|pyrimidine ribonucleotide metabolic process	GO:0003883|CTP synthase activity	GO:0005737|cytoplasm
pt2_01281	A	A1S	Potri.001G073000	Potri.001G073000(AS)	POPTR_0001s12480	NA	NA	AT5G44590.1	| Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr5:17987591-17989227 FORWARD LENGTH=349	LOC_Os03g03470.3	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_01282	A	A1S	Potri.001G073000	Potri.001G073000(AS)	POPTR_0001s12480	NA	NA	AT5G44590.1	| Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr5:17987591-17989227 FORWARD LENGTH=349	LOC_Os03g03470.3	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_01283	A	A1S	Potri.001G072900	Potri.001G072900(AS)	POPTR_0001s12490	sp|Q8DHG3|SYW_THEEB	Tryptophan--tRNA ligase OS=Thermosynechococcus elongatus (strain BP-1) GN=trpS PE=3 SV=1	AT2G25840.3	| Symbols: OVA4 | Nucleotidylyl transferase superfamily protein | chr2:11021924-11025158 FORWARD LENGTH=396	LOC_Os01g54020.1	protein|tRNA synthetase, putative, expressed	NA	NA	GO:0006418|tRNA aminoacylation for protein translation GO:0006436|tryptophanyl-tRNA aminoacylation GO:0006499|N-terminal protein myristoylation GO:0009658|chloroplast organization GO:0009793|embryo development ending in seed dormancy GO:0010027|thylakoid membrane organization GO:0010228|vegetative to reproductive phase transition of meristem GO:0016226|iron-sulfur cluster assembly GO:0048481|ovule development	GO:0000166|nucleotide binding GO:0004812|aminoacyl-tRNA ligase activity GO:0004830|tryptophan-tRNA ligase activity GO:0005524|ATP binding	GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_01284	A	A1S	Potri.001G072800	Potri.001G072800(AS)	POPTR_0001s12500	sp|Q9STE8|TC753_ARATH	Protein TOC75-3, chloroplastic OS=Arabidopsis thaliana GN=TOC75-3 PE=1 SV=1	AT3G46740.1	| Symbols: TOC75-III, MAR1 | translocon at the outer envelope membrane of chloroplasts 75-III | chr3:17216104-17219296 REVERSE LENGTH=818	LOC_Os03g16440.1	protein|outer membrane protein, OMP85 family, putative, expressed	IMGA|Medtr5g013940.1	Protein TOC75 chr5 4347090-4344238 H EGN_Mt100125 20111014	GO:0009658|chloroplast organization GO:0045036|protein targeting to chloroplast GO:0045037|protein import into chloroplast stroma GO:0048481|ovule development GO:0048598|embryonic morphogenesis	GO:0015450|P-P-bond-hydrolysis-driven protein transmembrane transporter activity	GO:0005774|vacuolar membrane GO:0009507|chloroplast GO:0009536|plastid GO:0009941|chloroplast envelope GO:0010006|toc complex GO:0016020|membrane GO:0031359|integral to chloroplast outer membrane
pt2_01285	A	A1S	Potri.001G072700	Potri.001G072700(AS)	POPTR_0001s12510	sp|A8FFD1|DNAJ_BACP2	Chaperone protein DnaJ OS=Bacillus pumilus (strain SAFR-032) GN=dnaJ PE=3 SV=1	AT5G59610.1	| Symbols: | Chaperone DnaJ-domain superfamily protein | chr5:24013165-24014954 FORWARD LENGTH=268	LOC_Os03g60790.1	protein|heat shock protein DnaJ, putative, expressed	IMGA|Medtr5g035770.1	Chaperone protein dnaJ chr5 15132063-15127235 F EGN_Mt100125 20111014	GO:0006457|protein folding	GO:0031072|heat shock protein binding GO:0051082|unfolded protein binding	GO:0009507|chloroplast
pt2_01286	A	A1S	Potri.001G072600	Potri.001G072600(AS)	POPTR_0001s12520	NA	NA	AT5G11680.1	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WW-domain-binding protein (InterPro:IPR018826); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:3759463-3760634 FORWARD LENGTH=207	LOC_Os09g33800.1	protein|arabinogalactan protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005829|cytosol GO:0005886|plasma membrane
pt2_01287	A	A1S	Potri.001G072500	Potri.001G072500(AS)	POPTR_0001s12530	sp|Q9SSE8|GLYT1_ARATH	Probable glycosyltransferase At3g07620 OS=Arabidopsis thaliana GN=At3g07620 PE=3 SV=1	AT4G38040.1	| Symbols: | Exostosin family protein | chr4:17867501-17869131 FORWARD LENGTH=425	LOC_Os02g09430.1	protein|exostosin family domain containing protein, expressed	IMGA|Medtr5g031480.1	Exostosin-like protein chr5 13079105-13085686 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003824|catalytic activity	GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0016020|membrane
pt2_01288	A	A1S	Potri.001G072400	Potri.001G072400(AS)	POPTR_0001s12540	NA	NA	AT5G47860.1	| Symbols: | Protein of unknown function (DUF1350) | chr5:19381656-19384310 FORWARD LENGTH=431	LOC_Os04g33280.2	protein|expressed protein	NA	NA	NA	NA	GO:0009507|chloroplast
pt2_01289	A	A2S	Potri.001G072300	Potri.001G072300(AS) Potri.003G158500(DS)	POPTR_0001s12550	NA	NA	AT5G47870.1	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: cobalt ion binding (TAIR:AT1G71310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:19384555-19385808 REVERSE LENGTH=199	LOC_Os03g63450.2	protein|snRK1-interacting protein 1, putative, expressed	IMGA|contig_114259_1.1	SnRK1-interacting protein contig_114259 3010-483 F PREDN 20111014	GO:0000724|double-strand break repair via homologous recombination	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_01290	A	A1S	Potri.001G072200	Potri.001G072200(AS)	POPTR_0001s12560	sp|Q5AYT7|FES1_EMENI	Hsp70 nucleotide exchange factor fes1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=fes1 PE=3 SV=1	AT3G51980.1	| Symbols: | ARM repeat superfamily protein | chr3:19285811-19287502 REVERSE LENGTH=382	LOC_Os09g33780.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	NA	GO:0005783|endoplasmic reticulum GO:0009507|chloroplast
pt2_01291	A	A1S	Potri.001G072100	Potri.001G072100(AS)	POPTR_0001s12570	sp|P43333|RU2A_ARATH	U2 small nuclear ribonucleoprotein A' OS=Arabidopsis thaliana GN=At1g09760 PE=2 SV=2	AT1G09760.1	| Symbols: U2A' | U2 small nuclear ribonucleoprotein A | chr1:3159476-3161603 REVERSE LENGTH=249	LOC_Os02g13990.1	protein|U2 small nuclear ribonucleoprotein A, putative, expressed	IMGA|contig_7939_2.1	U2 small nuclear ribonucleoprotein A contig_7939 5244-3418 E PREDN 20111014	GO:0000398|mRNA splicing, via spliceosome GO:0001510|RNA methylation GO:0009409|response to cold	NA	GO:0005634|nucleus GO:0005654|nucleoplasm GO:0005730|nucleolus GO:0005737|cytoplasm GO:0005829|cytosol GO:0009507|chloroplast GO:0015030|Cajal body
pt2_01292	A	A1S	Potri.001G072000	Potri.001G072000(AS)	POPTR_0001s12580	sp|P35614|ERF1Z_ARATH	Eukaryotic peptide chain release factor subunit 1-3 OS=Arabidopsis thaliana GN=ERF1-3 PE=2 SV=1	AT3G26618.1	| Symbols: ERF1-3 | eukaryotic release factor 1-3 | chr3:9788854-9790161 FORWARD LENGTH=435	LOC_Os03g49580.1	protein|eukaryotic peptide chain release factor subunit 1-1, putative, expressed	NA	NA	GO:0006415|translational termination	GO:0003747|translation release factor activity GO:0016149|translation release factor activity, codon specific	GO:0005737|cytoplasm
pt2_01293	C	C1S	Potri.001G071900	Potri.001G071900(CS)	sp|Q9FIJ2|NDUA2_ARATH	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Arabidopsis thaliana GN=At5g47890 PE=2 SV=1	AT5G47890.1	| Symbols: | NADH-ubiquinone oxidoreductase B8 subunit, putative | chr5:19388806-19390409 FORWARD LENGTH=97	LOC_Os04g24520.1	protein|ribosomal protein L51, putative, expressed	NA	NA	GO:0008150|biological_process GO:0009853|photorespiration	GO:0016655|oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor	GO:0005739|mitochondrion GO:0005747|mitochondrial respiratory chain complex I GO:0009507|chloroplast
pt2_01294	A	A1S	Potri.001G071700	Potri.001G071700(AS)	POPTR_0001s12600	sp|Q9ZUM9|ASHR2_ARATH	Histone-lysine N-methyltransferase ASHR2 OS=Arabidopsis thaliana GN=ASHR2 PE=2 SV=3	AT2G19640.2	| Symbols: ASHR2 | ASH1-related protein 2 | chr2:8491401-8492597 FORWARD LENGTH=398	LOC_Os08g10470.2	protein|histone-lysine N-methyltransferase ASHR2, putative, expressed	IMGA|Medtr5g027020.1	Histone-lysine N-methyltransferase ASHR2 chr5 10945980-10947687 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_01295	A	A1S	Potri.001G071500	Potri.001G071500(AS)	POPTR_0001s12610	NA	NA	AT5G47900.1	| Symbols: | Protein of unknown function (DUF1624) | chr5:19392408-19394963 FORWARD LENGTH=440	LOC_Os02g32504.1	protein|heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed	IMGA|contig_71955_1.1	Heparan-alpha-glucosaminide N-acetyltransferase contig_71955 1516-147 H PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005739|mitochondrion
pt2_01296	B	B2S	Potri.001G071400	Potri.001G071400(BS) Potri.001G071200(DS)	POPTR_0001s12620	sp|Q9SD53|Y3720_ARATH	UPF0481 protein At3g47200 OS=Arabidopsis thaliana GN=At3g47200 PE=1 SV=1	AT3G50120.1	| Symbols: | Plant protein of unknown function (DUF247) | chr3:18585157-18587246 REVERSE LENGTH=531	LOC_Os12g29650.1	protein|plant protein of unknown function domain containing protein, expressed	IMGA|Medtr5g086340.1	hypothetical protein chr5 36305986-36307922 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005886|plasma membrane
pt2_01297	A	A1S	Potri.001G071100	Potri.001G071100(AS)	POPTR_0001s12630	sp|Q43291|RL211_ARATH	60S ribosomal protein L21-1 OS=Arabidopsis thaliana GN=RPL21A PE=2 SV=2	AT1G09690.1	| Symbols: | Translation protein SH3-like family protein | chr1:3136407-3137430 REVERSE LENGTH=164	LOC_Os03g04750.1	protein|60S ribosomal protein L21-2, putative, expressed	NA	NA	GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005730|nucleolus GO:0005737|cytoplasm GO:0005840|ribosome GO:0009507|chloroplast GO:0022625|cytosolic large ribosomal subunit GO:0022626|cytosolic ribosome
pt2_01298	A	A2S	Potri.001G071000	Potri.001G071000(AS) Potri.003G159700(DS)	POPTR_0001s12640	sp|Q8LNZ5|XTHB_PHAAN	Probable xyloglucan endotransglucosylase/hydrolase protein B OS=Phaseolus angularis GN=XTHB PE=2 SV=1	AT5G13870.1	| Symbols: EXGT-A4, XTH5 | xyloglucan endotransglucosylase/hydrolase 5 | chr5:4475089-4476217 REVERSE LENGTH=293	LOC_Os11g33270.1	protein|glycosyl hydrolases family 16, putative, expressed	IMGA|Medtr5g091730.1	Xyloglucan endotransglucosylase/hydrolase chr5 38992618-38991125 E EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0006073|cellular glucan metabolic process	GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds GO:0016762|xyloglucan:xyloglucosyl transferase activity GO:0016798|hydrolase activity, acting on glycosyl bonds	GO:0005576|extracellular region GO:0005618|cell wall GO:0048046|apoplast
pt2_01299	A	A1S	Potri.001G070900	Potri.001G070900(AS)	POPTR_0001s12650	sp|Q2HXL0|RBOHC_SOLTU	Respiratory burst oxidase homolog protein C OS=Solanum tuberosum GN=RBOHC PE=1 SV=2	AT5G47910.1	| Symbols: RBOHD, ATRBOHD | respiratory burst oxidase homologue D | chr5:19397585-19401768 FORWARD LENGTH=921	LOC_Os11g33120.1	protein|respiratory burst oxidase, putative, expressed	IMGA|contig_76663_1.1	Respiratory burst oxidase protein F contig_76663 746-1988 E PREDN 20111014	GO:0006952|defense response GO:0007231|osmosensory signaling pathway GO:0009408|response to heat GO:0009611|response to wounding GO:0033500|carbohydrate homeostasis GO:0042744|hydrogen peroxide catabolic process GO:0043069|negative regulation of programmed cell death GO:0050832|defense response to fungus GO:0072593|reactive oxygen species metabolic process	GO:0004601|peroxidase activity GO:0005506|iron ion binding GO:0005509|calcium ion binding GO:0009055|electron carrier activity GO:0016174|NAD(P)H oxidase activity GO:0016491|oxidoreductase activity GO:0050660|flavin adenine dinucleotide binding GO:0050664|oxidoreductase activity, acting on NADH or NADPH, oxygen as acceptor	GO:0005634|nucleus GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_01300	A	A1S	Potri.001G070800	Potri.001G070800(AS)	POPTR_0001s12660	sp|Q55909|Y305_SYNY3	TVP38/TMEM64 family membrane protein slr0305 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr0305 PE=3 SV=1	AT1G44960.1	| Symbols: | SNARE associated Golgi protein family | chr1:16999576-17001447 FORWARD LENGTH=261	LOC_Os11g33100.1	protein|SNARE associated Golgi protein, putative, expressed	NA	NA	GO:0008150|biological_process	NA	GO:0005886|plasma membrane
pt2_01301	A	A2S	Potri.001G070700	Potri.001G070700(AS) Potri.003G160000(DS)	POPTR_0001s12680	NA	NA	AT1G28190.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G12340.1); Has 166 Blast hits to 162 proteins in 36 species: Archae - 0; Bacteria - 2; Metazoa - 15; Fungi - 5; Plants - 124; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). | chr1:9847015-9847815 REVERSE LENGTH=266	LOC_Os11g33050.1	protein|expressed protein	IMGA|Medtr5g089820.1	hypothetical protein chr5 38026220-38025455 F EGN_Mt100125 20111014	GO:0006612|protein targeting to membrane GO:0008150|biological_process GO:0009723|response to ethylene stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010363|regulation of plant-type hypersensitive response GO:0035556|intracellular signal transduction	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_01302	A	A1S	Potri.001G070600	Potri.001G070600(AS)	POPTR_0001s12690	sp|Q39817|CALX_SOYBN	Calnexin homolog OS=Glycine max PE=2 SV=1	AT5G61790.1	| Symbols: CNX1, ATCNX1 | calnexin 1 | chr5:24827394-24829642 REVERSE LENGTH=530	LOC_Os04g32950.1	protein|calreticulin precursor protein, putative, expressed	NA	NA	GO:0006457|protein folding GO:0009408|response to heat GO:0009627|systemic acquired resistance GO:0009644|response to high light intensity GO:0034976|response to endoplasmic reticulum stress GO:0042542|response to hydrogen peroxide	GO:0005509|calcium ion binding GO:0051082|unfolded protein binding	GO:0005739|mitochondrion GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0005783|endoplasmic reticulum GO:0005886|plasma membrane GO:0009505|plant-type cell wall GO:0009506|plasmodesma GO:0009507|chloroplast GO:0016020|membrane GO:0043231|intracellular membrane-bounded organelle
pt2_01303	A	A1S	Potri.001G070500	Potri.001G070500(AS)	POPTR_0001s12700	sp|P55861|MCM2_XENLA	DNA replication licensing factor mcm2 OS=Xenopus laevis GN=mcm2 PE=1 SV=2	AT1G44900.1	| Symbols: MCM2, ATMCM2 | minichromosome maintenance (MCM2/3/5) family protein | chr1:16970291-16974457 FORWARD LENGTH=936	LOC_Os11g29380.1	protein|MCM2 - Putative minichromosome maintenance MCM complex subunit 2, expressed	NA	NA	GO:0006084|acetyl-CoA metabolic process GO:0006260|DNA replication GO:0006261|DNA-dependent DNA replication GO:0006268|DNA unwinding involved in replication GO:0006270|DNA replication initiation GO:0006275|regulation of DNA replication GO:0006306|DNA methylation GO:0008283|cell proliferation GO:0009165|nucleotide biosynthetic process GO:0009790|embryo development GO:0009909|regulation of flower development GO:0010082|regulation of root meristem growth GO:0034968|histone lysine methylation GO:0042127|regulation of cell proliferation GO:0048364|root development GO:0051567|histone H3-K9 methylation GO:0051726|regulation of cell cycle	GO:0003677|DNA binding GO:0005524|ATP binding GO:0008094|DNA-dependent ATPase activity	GO:0000790|nuclear chromatin GO:0005634|nucleus GO:0005829|cytosol
pt2_01304	A	A1S	Potri.001G070400	Potri.001G070400(AS)	POPTR_0001s12710	NA	NA	AT3G16510.1	| Symbols: | Calcium-dependent lipid-binding (CaLB domain) family protein | chr3:5617112-5618194 REVERSE LENGTH=360	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_01305	A	A1S	Potri.001G070300	Potri.001G070300(AS)	POPTR_0001s12730	sp|Q9FTZ2|EBP_ORYSJ	Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Oryza sativa subsp. japonica GN=Os01g0103600 PE=2 SV=1	AT1G20050.1	| Symbols: HYD1 | C-8,7 sterol isomerase | chr1:6949160-6950135 FORWARD LENGTH=223	LOC_Os01g01369.1	protein|3-beta-hydroxysteroid-Delta-isomerase, putative, expressed	NA	NA	GO:0006084|acetyl-CoA metabolic process GO:0016125|sterol metabolic process GO:0016126|sterol biosynthetic process GO:0016132|brassinosteroid biosynthetic process GO:0019932|second-messenger-mediated signaling GO:0060964|regulation of gene silencing by miRNA	GO:0000247|C-8 sterol isomerase activity GO:0047750|cholestenol delta-isomerase activity	GO:0005886|plasma membrane
pt2_01306	A	A1S	Potri.001G070200	Potri.001G070200(AS)	POPTR_0001s12740	NA	NA	NA	NA	LOC_Os11g34680.1	protein|RNA recognition motif containing protein, putative, expressed	NA	NA	NA	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding	NA
pt2_01307	A	A2S	Potri.T133500	Potri.T133500(AS) Potri.001G070100(BS)	POPTR_0001s12750	sp|Q0WQK2|ZDHC9_ARATH	Probable S-acyltransferase At3g26935 OS=Arabidopsis thaliana GN=At3g26935 PE=1 SV=1	AT3G26935.1	| Symbols: | DHHC-type zinc finger family protein | chr3:9933001-9935218 REVERSE LENGTH=443	LOC_Os08g42620.2	protein|zinc finger DHHC domain-containing protein, putative, expressed	IMGA|Medtr1g098390.1	Palmitoyltransferase SWF1 chr1 28233746-28237541 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0008270|zinc ion binding	GO:0005886|plasma membrane
pt2_01308	A	A2S	Potri.T133600	Potri.T133600(AS) Potri.001G070000(BS)	POPTR_0001s12760	NA	NA	AT1G60360.1	| Symbols: | RING/U-box superfamily protein | chr1:22242748-22243731 REVERSE LENGTH=327	LOC_Os05g40980.2	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr5g041310.1	RING finger protein chr5 17741815-17742509 E EGN_Mt100125 20111014	NA	GO:0008270|zinc ion binding	GO:0005737|cytoplasm
pt2_01309	A	A2S	Potri.001G069900	Potri.001G069900(AS) Potri.T133700(AS)	POPTR_0001s12770	sp|Q9ZWA6|MGP_ARATH	Zinc finger protein MAGPIE OS=Arabidopsis thaliana GN=MGP PE=1 SV=1	AT3G50700.1	| Symbols: AtIDD2, IDD2 | indeterminate(ID)-domain 2 | chr3:18840945-18842829 FORWARD LENGTH=452	LOC_Os02g31890.1	protein|ZOS2-08 - C2H2 zinc finger protein, expressed	IMGA|Medtr1g083100.1	Zinc finger protein-like protein chr1 21501009-21504901 E EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0006355|regulation of transcription, DNA-dependent GO:0006612|protein targeting to membrane GO:0009617|response to bacterium GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0009965|leaf morphogenesis GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0030154|cell differentiation GO:0031348|negative regulation of defense response GO:0035304|regulation of protein dephosphorylation GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003676|nucleic acid binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_01310	A	A2S	Potri.T133800	Potri.T133800(AS) Potri.001G069800(BS)	POPTR_0001s12780	sp|Q9M7K4|POT5_ARATH	Potassium transporter 5 OS=Arabidopsis thaliana GN=POT5 PE=1 SV=1	AT4G13420.1	| Symbols: HAK5, ATHAK5 | high affinity K+ transporter 5 | chr4:7797038-7802174 REVERSE LENGTH=785	LOC_Os01g70490.1	protein|potassium transporter, putative, expressed	IMGA|Medtr5g071860.1	Potassium transporter chr5 29568951-29563893 E EGN_Mt100125 20111014	GO:0006813|potassium ion transport GO:0071805|potassium ion transmembrane transport	GO:0009674|potassium:sodium symporter activity GO:0015079|potassium ion transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_01311	A	A1S	Potri.001G069600	Potri.001G069600(AS)	POPTR_0001s12790	sp|Q9M7K4|POT5_ARATH	Potassium transporter 5 OS=Arabidopsis thaliana GN=POT5 PE=1 SV=1	AT4G13420.1	| Symbols: HAK5, ATHAK5 | high affinity K+ transporter 5 | chr4:7797038-7802174 REVERSE LENGTH=785	LOC_Os01g70490.1	protein|potassium transporter, putative, expressed	IMGA|Medtr5g070670.1	Potassium transporter chr5 28933662-28942483 E EGN_Mt100125 20111014	GO:0006813|potassium ion transport GO:0071805|potassium ion transmembrane transport	GO:0009674|potassium:sodium symporter activity GO:0015079|potassium ion transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_01312	A	A1S	Potri.001G069500	Potri.001G069500(AS)	POPTR_0001s12800	sp|Q9SFX2|PUB43_ARATH	U-box domain-containing protein 43 OS=Arabidopsis thaliana GN=PUB43 PE=2 SV=1	AT1G76390.2	| Symbols: | ARM repeat superfamily protein | chr1:28655914-28658531 FORWARD LENGTH=811	LOC_Os12g17900.1	protein|armadillo/beta-catenin repeat family protein, putative, expressed	IMGA|contig_56658_1.1	U-box domain-containing protein contig_56658 130-4641 F PREDN 20111014	GO:0016567|protein ubiquitination	GO:0004842|ubiquitin-protein ligase activity	GO:0000151|ubiquitin ligase complex GO:0005737|cytoplasm GO:0005886|plasma membrane
pt2_01313	A	A1S	Potri.001G069400	Potri.001G069400(AS)	POPTR_0001s12810	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01314	A	A1S	Potri.001G069300	Potri.001G069300(AS)	POPTR_0001s12820	sp|Q9FZ90|ERF87_ARATH	Ethylene-responsive transcription factor ERF087 OS=Arabidopsis thaliana GN=ERF087 PE=2 SV=1	AT1G28160.1	| Symbols: | Integrase-type DNA-binding superfamily protein | chr1:9839387-9840124 FORWARD LENGTH=245	LOC_Os04g32790.1	protein|AP2 domain containing protein, expressed	IMGA|Medtr5g032820.1	AP2/ERF domain-containing transcription factor chr5 13732308-13733396 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009739|response to gibberellin stimulus GO:0010030|positive regulation of seed germination	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_01315	A	A1S	Potri.001G069200	Potri.001G069200(AS)	POPTR_0001s12830	sp|Q93ZY7|NUD12_ARATH	Nudix hydrolase 12, mitochondrial OS=Arabidopsis thaliana GN=NUDT12 PE=2 SV=1	AT1G12880.1	| Symbols: atnudt12, NUDT12 | nudix hydrolase homolog 12 | chr1:4390036-4391046 FORWARD LENGTH=203	LOC_Os11g32750.2	protein|hydrolase, NUDIX family, domain containing protein, expressed	IMGA|Medtr5g078020.1	Nudix hydrolase chr5 32317324-32319991 F EGN_Mt100125 20111014	NA	GO:0016787|hydrolase activity	GO:0005739|mitochondrion
pt2_01316	A	A3S	Potri.001G069100	Potri.001G069100(AS) Potri.006G192900(BS) Potri.003G161200(DS)	POPTR_0001s12840	sp|Q9M2F1|RS272_ARATH	40S ribosomal protein S27-2 OS=Arabidopsis thaliana GN=RPS27B PE=2 SV=2	AT3G61110.1	| Symbols: ARS27A, RS27A | ribosomal protein S27 | chr3:22611710-22612632 FORWARD LENGTH=86	LOC_Os04g27860.1	protein|40S ribosomal protein S27, putative, expressed	NA	NA	GO:0001510|RNA methylation GO:0006412|translation GO:0009664|plant-type cell wall organization GO:0042545|cell wall modification	GO:0003735|structural constituent of ribosome	GO:0005618|cell wall GO:0005622|intracellular GO:0005737|cytoplasm GO:0005840|ribosome GO:0009506|plasmodesma GO:0022626|cytosolic ribosome GO:0022627|cytosolic small ribosomal subunit
pt2_01317	A	A2S	Potri.001G069000	Potri.001G069000(AS) Potri.003G161300(DS)	POPTR_0001s12850	sp|Q9FZ87|GH317_ARATH	Indole-3-acetic acid-amido synthetase GH3.17 OS=Arabidopsis thaliana GN=GH3.17 PE=1 SV=1	AT1G28130.1	| Symbols: GH3.17 | Auxin-responsive GH3 family protein | chr1:9825431-9827883 FORWARD LENGTH=609	LOC_Os07g47490.1	protein|OsGH3.11 - Probable indole-3-acetic acid-amido synthetase, expressed	IMGA|Medtr5g016320.1	Indole-3-acetic acid-amido synthetase GH3.3 chr5 5576809-5574506 F EGN_Mt100125 20111014	GO:0009733|response to auxin stimulus GO:0010252|auxin homeostasis GO:0016132|brassinosteroid biosynthetic process	GO:0010279|indole-3-acetic acid amido synthetase activity	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_01318	A	A1S	Potri.001G068900	Potri.001G068900(AS)	POPTR_0001s12860	NA	NA	AT5G13390.1	| Symbols: NEF1 | no exine formation 1 | chr5:4292809-4296572 FORWARD LENGTH=1123	LOC_Os11g32470.1	protein|NEF1, putative, expressed	NA	NA	NA	NA	GO:0009507|chloroplast
pt2_01319	A	A1S	Potri.001G068800	Potri.001G068800(AS)	POPTR_0001s12870	sp|Q67YC9|Y4141_ARATH	Uncharacterized protein At4g14100 OS=Arabidopsis thaliana GN=At4g14100 PE=2 SV=1	AT3G23760.1	| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: transferases, transferring glycosyl groups (TAIR:AT4G14100.1); Has 108 Blast hits to 104 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). | chr3:8562965-8564640 REVERSE LENGTH=194	LOC_Os03g63380.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0016757|transferase activity, transferring glycosyl groups	GO:0005773|vacuole GO:0009507|chloroplast
pt2_01320	A	A1S	Potri.001G068700	Potri.001G068700(AS)	POPTR_0001s12880	sp|Q8LE94|RING3_ARATH	E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana GN=At3g02290 PE=2 SV=1	AT5G38895.1	| Symbols: | RING/U-box superfamily protein | chr5:15572084-15573315 FORWARD LENGTH=221	LOC_Os01g70160.1	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr5g046970.1	E3 ubiquitin-protein ligase chr5 20175519-20174021 I EGN_Mt100125 20111014	GO:0000303|response to superoxide GO:0006499|N-terminal protein myristoylation GO:0006914|autophagy GO:0009651|response to salt stress GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009743|response to carbohydrate stimulus GO:0009873|ethylene mediated signaling pathway GO:0010200|response to chitin GO:0010286|heat acclimation	GO:0008270|zinc ion binding	GO:0005737|cytoplasm
pt2_01321	A	A1S	Potri.001G068600	Potri.001G068600(AS)	POPTR_0001s12890	sp|Q9LYR6|PTR49_ARATH	Probable peptide/nitrate transporter At5g13400 OS=Arabidopsis thaliana GN=At5g13400 PE=2 SV=1	AT5G13400.1	| Symbols: | Major facilitator superfamily protein | chr5:4296854-4299079 REVERSE LENGTH=624	LOC_Os01g01360.1	protein|peptide transporter PTR2, putative, expressed	IMGA|Medtr5g055000.1	Peptide transporter PTR chr5 22113111-22119217 F EGN_Mt100125 20111014	GO:0006857|oligopeptide transport	GO:0005215|transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_01322	A	A1S	Potri.001G068500	Potri.001G068500(AS)	POPTR_0001s12900	NA	NA	AT5G64680.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:25854433-25855331 FORWARD LENGTH=203	LOC_Os01g15520.1	protein|expressed protein	NA	NA	GO:0000398|mRNA splicing, via spliceosome GO:0000741|karyogamy GO:0001510|RNA methylation GO:0006312|mitotic recombination GO:0006626|protein targeting to mitochondrion GO:0008150|biological_process GO:0009560|embryo sac egg cell differentiation GO:0009640|photomorphogenesis GO:0010388|cullin deneddylation GO:0051604|protein maturation	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005730|nucleolus
pt2_01323	A	A1S	Potri.001G068400	Potri.001G068400(AS)	POPTR_0001s12910	sp|Q9SAA9|CP511_ARATH	Sterol 14-demethylase OS=Arabidopsis thaliana GN=CYP51G1 PE=1 SV=1	AT1G11680.1	| Symbols: CYP51G1, EMB1738, CYP51A2, CYP51 | CYTOCHROME P450 51G1 | chr1:3938925-3940585 FORWARD LENGTH=488	LOC_Os11g32240.1	protein|cytochrome P450 51, putative, expressed	IMGA|contig_176089_1.1	Cytochrome P450-like protein contig_176089 389-1549 F PREDN 20111014	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0009086|methionine biosynthetic process GO:0009793|embryo development ending in seed dormancy GO:0016126|sterol biosynthetic process GO:0019745|pentacyclic triterpenoid biosynthetic process GO:0055114|oxidation-reduction process	GO:0004497|monooxygenase activity GO:0005506|iron ion binding GO:0008398|sterol 14-demethylase activity GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005576|extracellular region GO:0005783|endoplasmic reticulum GO:0005794|Golgi apparatus GO:0005886|plasma membrane
pt2_01324	A	A1S	Potri.001G068300	Potri.001G068300(AS)	POPTR_0001s12920	sp|Q9LYR5|FKB19_ARATH	Peptidyl-prolyl cis-trans isomerase FKBP19, chloroplastic OS=Arabidopsis thaliana GN=FKBP19 PE=1 SV=1	AT5G13410.1	| Symbols: | FKBP-like peptidyl-prolyl cis-trans isomerase family protein | chr5:4299830-4301706 REVERSE LENGTH=256	LOC_Os07g04160.1	protein|peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed	NA	NA	GO:0000413|protein peptidyl-prolyl isomerization GO:0006457|protein folding GO:0018208|peptidyl-proline modification	GO:0003755|peptidyl-prolyl cis-trans isomerase activity GO:0005528|FK506 binding	GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009543|chloroplast thylakoid lumen GO:0009579|thylakoid GO:0031977|thylakoid lumen
pt2_01325	A	A1S	Potri.001G068300	Potri.001G068300(AS)	POPTR_0001s12920	sp|Q9LYR5|FKB19_ARATH	Peptidyl-prolyl cis-trans isomerase FKBP19, chloroplastic OS=Arabidopsis thaliana GN=FKBP19 PE=1 SV=1	AT5G13410.1	| Symbols: | FKBP-like peptidyl-prolyl cis-trans isomerase family protein | chr5:4299830-4301706 REVERSE LENGTH=256	LOC_Os07g04160.1	protein|peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed	NA	NA	GO:0000413|protein peptidyl-prolyl isomerization GO:0006457|protein folding GO:0018208|peptidyl-proline modification	GO:0003755|peptidyl-prolyl cis-trans isomerase activity GO:0005528|FK506 binding	GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009543|chloroplast thylakoid lumen GO:0009579|thylakoid GO:0031977|thylakoid lumen
pt2_01326	A	A1S	Potri.001G068300	Potri.001G068300(AS)	POPTR_0001s12920	sp|Q9LYR5|FKB19_ARATH	Peptidyl-prolyl cis-trans isomerase FKBP19, chloroplastic OS=Arabidopsis thaliana GN=FKBP19 PE=1 SV=1	AT5G13410.1	| Symbols: | FKBP-like peptidyl-prolyl cis-trans isomerase family protein | chr5:4299830-4301706 REVERSE LENGTH=256	LOC_Os07g04160.1	protein|peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed	NA	NA	GO:0000413|protein peptidyl-prolyl isomerization GO:0006457|protein folding GO:0018208|peptidyl-proline modification	GO:0003755|peptidyl-prolyl cis-trans isomerase activity GO:0005528|FK506 binding	GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane GO:0009543|chloroplast thylakoid lumen GO:0009579|thylakoid GO:0031977|thylakoid lumen
pt2_01327	A	A1S	Potri.001G068200	Potri.001G068200(AS)	POPTR_0001s12930	sp|A0LTY8|TAL_ACIC1	Transaldolase OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=tal PE=3 SV=1	AT5G13420.1	| Symbols: | Aldolase-type TIM barrel family protein | chr5:4302080-4304212 REVERSE LENGTH=438	LOC_Os01g70170.1	protein|transaldolase, putative, expressed	IMGA|Medtr5g024890.1	Transaldolase chr5 9806520-9806177 H EGN_Mt100125 20111014	GO:0005975|carbohydrate metabolic process GO:0006096|glycolysis GO:0006098|pentose-phosphate shunt GO:0009060|aerobic respiration GO:0046686|response to cadmium ion	GO:0003824|catalytic activity GO:0004801|sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009536|plastid GO:0009570|chloroplast stroma
pt2_01328	A	A1S	Potri.001G068100	Potri.001G068100(AS)	POPTR_0001s12940	sp|Q9FZJ1|IRX10_ARATH	Probable beta-1,4-xylosyltransferase IRX10 OS=Arabidopsis thaliana GN=IRX10 PE=2 SV=1	AT1G27440.1	| Symbols: GUT2, IRX10, ATGUT1 | Exostosin family protein | chr1:9529265-9531213 REVERSE LENGTH=412	LOC_Os01g70200.1	protein|exostosin family domain containing protein, expressed	IMGA|Medtr5g031480.1	Exostosin-like protein chr5 13079105-13085686 F EGN_Mt100125 20111014	GO:0010413|glucuronoxylan metabolic process GO:0010417|glucuronoxylan biosynthetic process GO:0045492|xylan biosynthetic process	GO:0003824|catalytic activity GO:0080116|glucuronoxylan glucuronosyltransferase activity	GO:0005794|Golgi apparatus GO:0016020|membrane
pt2_01329	A	A1S	Potri.001G068000	Potri.001G068000(AS)	POPTR_0001s12950	sp|Q55CU8|RSC5_DICDI	Random slug protein 5 OS=Dictyostelium discoideum GN=rsc5 PE=2 SV=1	AT1G01630.1	| Symbols: | Sec14p-like phosphatidylinositol transfer family protein | chr1:229206-230675 FORWARD LENGTH=255	LOC_Os03g63370.1	protein|CRAL/TRIO domain containing protein, expressed	IMGA|Medtr5g062310.1	Clavesin chr5 25079243-25077091 F EGN_Mt100125 20111014	GO:0006810|transport GO:0019344|cysteine biosynthetic process	GO:0005215|transporter activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01330	A	A2S	Potri.001G068000	Potri.001G068000(AS) Potri.003G162100(DS)	POPTR_0001s12950	sp|Q55CU8|RSC5_DICDI	Random slug protein 5 OS=Dictyostelium discoideum GN=rsc5 PE=2 SV=1	AT1G01630.1	| Symbols: | Sec14p-like phosphatidylinositol transfer family protein | chr1:229206-230675 FORWARD LENGTH=255	LOC_Os03g63370.1	protein|CRAL/TRIO domain containing protein, expressed	IMGA|Medtr5g062310.1	Clavesin chr5 25079243-25077091 F EGN_Mt100125 20111014	GO:0006810|transport GO:0019344|cysteine biosynthetic process	GO:0005215|transporter activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01331	A	A1S	Potri.001G068000	Potri.001G068000(AS)	POPTR_0001s12950	sp|Q55CU8|RSC5_DICDI	Random slug protein 5 OS=Dictyostelium discoideum GN=rsc5 PE=2 SV=1	AT1G01630.1	| Symbols: | Sec14p-like phosphatidylinositol transfer family protein | chr1:229206-230675 FORWARD LENGTH=255	LOC_Os03g63370.1	protein|CRAL/TRIO domain containing protein, expressed	IMGA|Medtr5g062310.1	Clavesin chr5 25079243-25077091 F EGN_Mt100125 20111014	GO:0006810|transport GO:0019344|cysteine biosynthetic process	GO:0005215|transporter activity	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01332	A	A2S	Potri.001G067900	Potri.001G067900(AS) Potri.003G162200(DS)	POPTR_0001s12960	sp|P51132|UCRI2_TOBAC	Cytochrome b-c1 complex subunit Rieske-2, mitochondrial OS=Nicotiana tabacum PE=2 SV=1	AT5G13430.1	| Symbols: | Ubiquinol-cytochrome C reductase iron-sulfur subunit | chr5:4305414-4307399 REVERSE LENGTH=272	LOC_Os02g32120.1	protein|cytochrome b-c1 complex subunit Rieske, mitochondrial precursor, putative, expressed	NA	NA	GO:0055114|oxidation-reduction process	GO:0008121|ubiquinol-cytochrome-c reductase activity GO:0016491|oxidoreductase activity GO:0016679|oxidoreductase activity, acting on diphenols and related substances as donors GO:0046872|metal ion binding GO:0051537|2 iron, 2 sulfur cluster binding	GO:0005739|mitochondrion GO:0005750|mitochondrial respiratory chain complex III GO:0016020|membrane
pt2_01333	A	A1S	Potri.001G067800	Potri.001G067800(AS)	POPTR_0001s12970	sp|O23627|SYGM1_ARATH	Glycine--tRNA ligase 1, mitochondrial OS=Arabidopsis thaliana GN=GLYRS-1 PE=2 SV=1	AT1G29880.1	| Symbols: | glycyl-tRNA synthetase / glycine--tRNA ligase | chr1:10459662-10462781 REVERSE LENGTH=729	LOC_Os08g42560.1	protein|tRNA synthetase class II core domain containing protein, expressed	IMGA|contig_63847_1.1	Glycyl-tRNA synthetase contig_63847 4432-2385 E PREDN 20111014	GO:0006094|gluconeogenesis GO:0006418|tRNA aminoacylation for protein translation GO:0006426|glycyl-tRNA aminoacylation GO:0007010|cytoskeleton organization GO:0010498|proteasomal protein catabolic process GO:0046686|response to cadmium ion	GO:0000166|nucleotide binding GO:0004812|aminoacyl-tRNA ligase activity GO:0004820|glycine-tRNA ligase activity GO:0005524|ATP binding	GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network GO:0005829|cytosol
pt2_01334	A	A1S	Potri.001G067700	Potri.001G067700(AS)	POPTR_0001s12980	sp|Q8VYZ0|ORTH2_ARATH	E3 ubiquitin-protein ligase ORTHRUS 2 OS=Arabidopsis thaliana GN=ORTH2 PE=1 SV=1	AT1G57820.1	| Symbols: VIM1, ORTH2 | Zinc finger (C3HC4-type RING finger) family protein | chr1:21414342-21417902 REVERSE LENGTH=645	LOC_Os05g01230.1	protein|zinc finger, C3HC4 type domain containing protein, expressed	IMGA|Medtr5g098680.1	E3 ubiquitin-protein ligase UHRF1 chr5 42156395-42149836 E EGN_Mt100125 20111014	GO:0000280|nuclear division GO:0000724|double-strand break repair via homologous recombination GO:0006260|DNA replication GO:0006261|DNA-dependent DNA replication GO:0006270|DNA replication initiation GO:0006275|regulation of DNA replication GO:0006306|DNA methylation GO:0006325|chromatin organization GO:0006342|chromatin silencing GO:0006355|regulation of transcription, DNA-dependent GO:0007000|nucleolus organization GO:0008283|cell proliferation GO:0009555|pollen development GO:0010424|DNA methylation on cytosine within a CG sequence GO:0016444|somatic cell DNA recombination GO:0016567|protein ubiquitination GO:0016568|chromatin modification GO:0016572|histone phosphorylation GO:0031047|gene silencing by RNA GO:0031508|centromeric heterochromatin assembly GO:0032776|DNA methylation on cytosine GO:0051567|histone H3-K9 methylation GO:0051726|regulation of cell cycle GO:0090309|positive regulation of methylation-dependent chromatin silencing	GO:0003677|DNA binding GO:0003682|chromatin binding GO:0004842|ubiquitin-protein ligase activity GO:0008270|zinc ion binding GO:0008327|methyl-CpG binding GO:0010385|double-stranded methylated DNA binding GO:0010428|methyl-CpNpG binding GO:0010429|methyl-CpNpN binding GO:0042393|histone binding	GO:0005634|nucleus GO:0010369|chromocenter
pt2_01335	A	A1S	Potri.001G067600	Potri.001G067600(AS)	POPTR_0001s12990	sp|Q9LYU3|EF113_ARATH	Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana GN=ERF113 PE=2 SV=1	AT5G13330.1	| Symbols: Rap2.6L | related to AP2 6l | chr5:4272384-4274461 FORWARD LENGTH=212	LOC_Os04g32620.1	protein|ethylene-responsive transcription factor ERF114, putative, expressed	IMGA|Medtr1g087920.1	Ethylene responsive transcription factor 2b chr1 23755953-23757256 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009407|toxin catabolic process GO:0009414|response to water deprivation GO:0009651|response to salt stress GO:0009723|response to ethylene stimulus GO:0009737|response to abscisic acid stimulus GO:0009751|response to salicylic acid stimulus GO:0009753|response to jasmonic acid stimulus GO:0010260|organ senescence GO:0010583|response to cyclopentenone GO:0045893|positive regulation of transcription, DNA-dependent GO:0046482|para-aminobenzoic acid metabolic process GO:0071497|cellular response to freezing	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_01336	C	C1A	Potri.001G067500	Potri.001G067500(CA)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01337	B	B1S	Potri.001G067500	Potri.001G067500(BS)	POPTR_0001s13010	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01338	A	A1S	Potri.001G067400	Potri.001G067400(AS)	POPTR_0001s13020	sp|Q8LG98|OTUBL_ARATH	Ubiquitin thioesterase otubain-like OS=Arabidopsis thaliana GN=At1g28120 PE=2 SV=2	AT1G28120.1	| Symbols: | CONTAINS InterPro DOMAIN/s: Ovarian tumour, otubain (InterPro:IPR003323), Ubiquitin thioesterase Otubain (InterPro:IPR016615), Peptidase C65, otubain (InterPro:IPR019400); Has 413 Blast hits to 411 proteins in 139 species: Archae - 0; Bacteria - 0; Metazoa - 184; Fungi - 83; Plants - 88; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). | chr1:9813219-9815143 REVERSE LENGTH=306	LOC_Os08g42540.1	protein|ubiquitin thioesterase otubain-like, putative, expressed	NA	NA	GO:0008150|biological_process GO:0019538|protein metabolic process	GO:0003674|molecular_function GO:0008242|omega peptidase activity	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_01339	A	A1S	Potri.001G067300	Potri.001G067300(AS)	POPTR_0001s13030	sp|Q64M78|OML4_ORYSJ	Protein MEI2-like 4 OS=Oryza sativa subsp. japonica GN=ML4 PE=2 SV=1	AT5G61960.2	| Symbols: AML1, ML1 | MEI2-like protein 1 | chr5:24879001-24883483 REVERSE LENGTH=915	LOC_Os02g31290.2	protein|AML1, putative, expressed	IMGA|Medtr5g068540.1	Protein terminal ear1 chr5 28030406-28026385 H EGN_Mt100125 20111014	GO:0045836|positive regulation of meiosis GO:0045927|positive regulation of growth GO:0048507|meristem development	GO:0000166|nucleotide binding GO:0003676|nucleic acid binding GO:0003723|RNA binding GO:0005515|protein binding	GO:0005634|nucleus
pt2_01340	A	A1S	Potri.001G067200	Potri.001G067200(AS)	POPTR_0001s13040	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01341	A	A2S	Potri.001G067000	Potri.001G067000(AS) Potri.001G067100(AS)	POPTR_0001s13050	sp|Q9Y5Z4|HEBP2_HUMAN	Heme-binding protein 2 OS=Homo sapiens GN=HEBP2 PE=1 SV=1	AT1G17100.1	| Symbols: | SOUL heme-binding family protein | chr1:5844766-5845539 FORWARD LENGTH=232	LOC_Os01g11230.1	protein|SOUL heme-binding protein, putative, expressed	NA	NA	GO:0008150|biological_process GO:0019761|glucosinolate biosynthetic process	NA	GO:0005773|vacuole GO:0005774|vacuolar membrane GO:0009507|chloroplast
pt2_01342	A	A1S	Potri.001G066900	Potri.001G066900(AS)	POPTR_0001s13060	NA	NA	AT2G33550.1	| Symbols: | Homeodomain-like superfamily protein | chr2:14210180-14211487 REVERSE LENGTH=314	LOC_Os04g32590.1	protein|transcription factor, putative, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_01343	A	A1S	Potri.001G066800	Potri.001G066800(AS)	POPTR_0001s13070	sp|Q5W7F2|AGD3_ARATH	ADP-ribosylation factor GTPase-activating protein AGD3 OS=Arabidopsis thaliana GN=AGD3 PE=1 SV=1	AT5G13300.1	| Symbols: SFC, VAN3, AGD3 | ARF GTPase-activating protein | chr5:4255923-4262018 REVERSE LENGTH=827	LOC_Os09g33600.1	protein|ARF GTPase-activating domain-containing protein, putative, expressed	IMGA|Medtr5g022050.1	Ankyrin repeat domain-containing protein chr5 8396885-8392674 E EGN_Mt100125 20111014	GO:0003002|regionalization GO:0006897|endocytosis GO:0007155|cell adhesion GO:0009733|response to auxin stimulus GO:0009855|determination of bilateral symmetry GO:0009887|organ morphogenesis GO:0009888|tissue development GO:0009944|polarity specification of adaxial/abaxial axis GO:0009965|leaf morphogenesis GO:0010014|meristem initiation GO:0010051|xylem and phloem pattern formation GO:0010087|phloem or xylem histogenesis GO:0010089|xylem development GO:0010090|trichome morphogenesis GO:0010638|positive regulation of organelle organization GO:0016049|cell growth GO:0033043|regulation of organelle organization GO:0033044|regulation of chromosome organization GO:0045010|actin nucleation GO:0045595|regulation of cell differentiation GO:0048439|flower morphogenesis GO:0048449|floral organ formation GO:0048519|negative regulation of biological process GO:0048589|developmental growth GO:0048765|root hair cell differentiation GO:0071555|cell wall organization	GO:0005515|protein binding GO:0005543|phospholipid binding GO:0008060|ARF GTPase activator activity GO:0008270|zinc ion binding GO:0035091|phosphatidylinositol binding	GO:0005794|Golgi apparatus GO:0005829|cytosol GO:0005886|plasma membrane GO:0030140|trans-Golgi network transport vesicle
pt2_01344	A	A1S	Potri.001G066700	Potri.001G066700(AS)	POPTR_0001s13080	sp|Q9LYU7|CRN_ARATH	Inactive leucine-rich repeat receptor-like protein kinase CORYNE OS=Arabidopsis thaliana GN=CRN PE=1 SV=1	AT5G13290.2	| Symbols: SOL2, CRN | Protein kinase superfamily protein | chr5:4252924-4254215 REVERSE LENGTH=401	LOC_Os01g70260.1	protein|receptor-like protein kinase 2 precursor, putative, expressed	IMGA|Medtr5g026510.1	LRR receptor-like serine/threonine-protein kinase FEI chr5 10652878-10642878 E EGN_Mt100125 20111014	GO:0006406|mRNA export from nucleus GO:0006468|protein phosphorylation GO:0007155|cell adhesion GO:0009855|determination of bilateral symmetry GO:0009886|post-embryonic morphogenesis GO:0009909|regulation of flower development GO:0009944|polarity specification of adaxial/abaxial axis GO:0009965|leaf morphogenesis GO:0010014|meristem initiation GO:0010073|meristem maintenance GO:0010074|maintenance of meristem identity GO:0010075|regulation of meristem growth GO:0010082|regulation of root meristem growth GO:0010090|trichome morphogenesis GO:0016570|histone modification GO:0045010|actin nucleation GO:0048449|floral organ formation GO:0048481|ovule development GO:0048507|meristem development GO:0048765|root hair cell differentiation GO:0071555|cell wall organization	GO:0004672|protein kinase activity GO:0005515|protein binding GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0019900|kinase binding GO:0033612|receptor serine/threonine kinase binding	GO:0005886|plasma membrane
pt2_01345	A	A1S	Potri.001G066500	Potri.001G066500(AS)	POPTR_0001s13090	sp|Q40392|TMVRN_NICGU	TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1	AT5G36930.1	| Symbols: | Disease resistance protein (TIR-NBS-LRR class) family | chr5:14567771-14571907 REVERSE LENGTH=1188	LOC_Os01g15580.1	protein|disease resistance protein RGA2, putative, expressed	IMGA|contig_62367_1.1	TIR-NBS disease resistance-like protein contig_62367 389-4897 H PREDN 20111014	GO:0006952|defense response GO:0007165|signal transduction	GO:0043531|ADP binding	GO:0005622|intracellular GO:0005737|cytoplasm
pt2_01346	A	A1S	Potri.001G066400	Potri.001G066400(AS)	POPTR_0001s13100	sp|Q03200|LIRP1_ORYSJ	Light-regulated protein OS=Oryza sativa subsp. japonica GN=LIR1 PE=2 SV=1	AT3G26740.1	| Symbols: CCL | CCR-like | chr3:9827868-9828461 FORWARD LENGTH=141	LOC_Os01g01340.1	protein|light-induced protein 1-like, putative, expressed	NA	NA	GO:0008150|biological_process GO:0030003|cellular cation homeostasis GO:0070838|divalent metal ion transport	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_01347	A	A1S	Potri.001G066200	Potri.001G066200(AS)	POPTR_0001s13110	sp|Q94JM3|ARFB_ARATH	Auxin response factor 2 OS=Arabidopsis thaliana GN=ARF2 PE=1 SV=2	AT5G62000.4	| Symbols: ARF2 | auxin response factor 2 | chr5:24910859-24914873 FORWARD LENGTH=853	LOC_Os12g29520.4	protein|auxin response factor, putative, expressed	IMGA|Medtr5g076270.1	Auxin response factor chr5 31499972-31490689 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0008285|negative regulation of cell proliferation GO:0009725|response to hormone stimulus GO:0009737|response to abscisic acid stimulus GO:0009911|positive regulation of flower development GO:0010047|fruit dehiscence GO:0010150|leaf senescence GO:0010227|floral organ abscission GO:0042744|hydrogen peroxide catabolic process GO:0045892|negative regulation of transcription, DNA-dependent GO:0048481|ovule development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0043565|sequence-specific DNA binding GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_01348	A	A1S	Potri.001G066100	Potri.001G066100(AS)	POPTR_0001s13120	sp|Q9LYU9|PP378_ARATH	Pentatricopeptide repeat-containing protein At5g13270, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H90 PE=2 SV=1	AT5G13270.1	| Symbols: RARE1 | Pentatricopeptide repeat (PPR) superfamily protein | chr5:4246954-4249212 REVERSE LENGTH=752	LOC_Os02g01610.1	protein|pentatricopeptide, putative, expressed	IMGA|Medtr5g095690.1	Pentatricopeptide repeat-containing protein chr5 40792756-40789774 H EGN_Mt100125 20111014	GO:0009451|RNA modification GO:0016556|mRNA modification	NA	GO:0009507|chloroplast
pt2_01349	A	A1S	Potri.001G066000	Potri.001G066000(AS)	POPTR_0001s13130	NA	NA	AT1G28100.4	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 64 Blast hits to 64 proteins in 27 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 6; Plants - 42; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr1:9802120-9803981 FORWARD LENGTH=290	LOC_Os10g35644.1	protein|expressed protein	NA	NA	GO:0008150|biological_process GO:0015995|chlorophyll biosynthetic process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01350	A	A1S	Potri.001G065900	Potri.001G065900(AS)	POPTR_0001s13140	sp|Q93Y09|SCP45_ARATH	Serine carboxypeptidase-like 45 OS=Arabidopsis thaliana GN=SCPL45 PE=2 SV=1	AT1G28110.2	| Symbols: SCPL45 | serine carboxypeptidase-like 45 | chr1:9804153-9806832 REVERSE LENGTH=461	LOC_Os11g31980.1	protein|OsSCP63 - Putative Serine Carboxypeptidase homologue, expressed	IMGA|Medtr5g072570.1	Serine carboxypeptidase-like protein chr5 29906817-29903151 H EGN_Mt100125 20111014	GO:0006508|proteolysis	GO:0004185|serine-type carboxypeptidase activity	GO:0005576|extracellular region GO:0009505|plant-type cell wall GO:0009506|plasmodesma
pt2_01351	A	A1S	Potri.001G065800	Potri.001G065800(AS)	POPTR_0001s13160	NA	NA	AT3G48860.2	| Symbols: | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23700.1); Has 12429 Blast hits to 9751 proteins in 897 species: Archae - 180; Bacteria - 1190; Metazoa - 6552; Fungi - 1361; Plants - 886; Viruses - 50; Other Eukaryotes - 2210 (source: NCBI BLink). | chr3:18117619-18121853 FORWARD LENGTH=577	LOC_Os01g70320.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	NA	GO:0005737|cytoplasm
pt2_01352	A	A1S	Potri.001G065800	Potri.001G065800(AS)	POPTR_0001s13160	NA	NA	AT3G48860.2	| Symbols: | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23700.1); Has 12429 Blast hits to 9751 proteins in 897 species: Archae - 180; Bacteria - 1190; Metazoa - 6552; Fungi - 1361; Plants - 886; Viruses - 50; Other Eukaryotes - 2210 (source: NCBI BLink). | chr3:18117619-18121853 FORWARD LENGTH=577	LOC_Os01g70320.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	NA	GO:0005737|cytoplasm
pt2_01353	A	A1S	Potri.001G065800	Potri.001G065800(AS)	POPTR_0001s13160	NA	NA	AT3G48860.2	| Symbols: | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23700.1); Has 12429 Blast hits to 9751 proteins in 897 species: Archae - 180; Bacteria - 1190; Metazoa - 6552; Fungi - 1361; Plants - 886; Viruses - 50; Other Eukaryotes - 2210 (source: NCBI BLink). | chr3:18117619-18121853 FORWARD LENGTH=577	LOC_Os01g70320.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	NA	GO:0005737|cytoplasm
pt2_01354	A	A1S	Potri.001G065700	Potri.001G065700(AS)	POPTR_0001s13170	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01355	A	A1S	Potri.001G065600	Potri.001G065600(AS)	POPTR_0001s13180	sp|Q8LL04|CPL3_ARATH	RNA polymerase II C-terminal domain phosphatase-like 3 OS=Arabidopsis thaliana GN=CPL3 PE=1 SV=2	AT2G33540.1	| Symbols: CPL3, ATCPL3 | C-terminal domain phosphatase-like 3 | chr2:14204081-14208797 REVERSE LENGTH=1241	LOC_Os11g31890.1	protein|NLI interacting factor-like phosphatase, putative, expressed	NA	NA	GO:0000394|RNA splicing, via endonucleolytic cleavage and ligation GO:0006366|transcription from RNA polymerase II promoter GO:0009651|response to salt stress GO:0009788|negative regulation of abscisic acid mediated signaling pathway	GO:0004721|phosphoprotein phosphatase activity GO:0008022|protein C-terminus binding GO:0008420|CTD phosphatase activity	GO:0005622|intracellular GO:0005634|nucleus
pt2_01356	A	A1S	Potri.001G062900	Potri.001G062900(AS)	POPTR_0001s13190	sp|Q93W88|BH137_ARATH	Transcription factor bHLH137 OS=Arabidopsis thaliana GN=BHLH137 PE=2 SV=1	AT5G50915.2	| Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr5:20710764-20712252 REVERSE LENGTH=286	LOC_Os09g33580.1	protein|BEE 1, putative, expressed	IMGA|contig_61564_1.1	BHLH transcription factor contig_61564 6268-1844 E PREDN 20111014	GO:0009739|response to gibberellin stimulus	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_01357	A	A1S	Potri.001G062800	Potri.001G062800(AS)	POPTR_0001s13200	NA	NA	AT3G48800.1	| Symbols: | Sterile alpha motif (SAM) domain-containing protein | chr3:18095825-18096661 REVERSE LENGTH=278	LOC_Os03g63320.1	protein|SAM domain containing protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_01358	A	A1S	Potri.001G062700	Potri.001G062700(AS)	POPTR_0001s13210	sp|Q9M9Y4|DRIP1_ARATH	E3 ubiquitin protein ligase DRIP1 OS=Arabidopsis thaliana GN=DRIP1 PE=1 SV=2	AT5G13250.1	| Symbols: | RING finger protein | chr5:4234486-4241615 FORWARD LENGTH=387	LOC_Os04g32510.1	protein|expressed protein	IMGA|Medtr1g093150.1	hypothetical protein chr1 26155119-26152749 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_01359	C	C1S	Potri.001G062700	Potri.001G062700(CS)	sp|Q9M9Y4|DRIP1_ARATH	E3 ubiquitin protein ligase DRIP1 OS=Arabidopsis thaliana GN=DRIP1 PE=1 SV=2	AT5G13250.1	| Symbols: | RING finger protein | chr5:4234486-4241615 FORWARD LENGTH=387	LOC_Os04g32510.1	protein|expressed protein	IMGA|Medtr1g093150.1	hypothetical protein chr1 26155119-26152749 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_01360	C	C1S	Potri.001G062600	Potri.001G062600(CS)	sp|Q9LYV3|PP377_ARATH	Putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3 SV=1	AT5G13230.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:4222514-4224982 FORWARD LENGTH=822	LOC_Os03g32620.1	protein|pentatricopeptide, putative, expressed	IMGA|Medtr5g095690.1	Pentatricopeptide repeat-containing protein chr5 40792756-40789774 H EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005739|mitochondrion
pt2_01361	A	A1S	Potri.001G062500	Potri.001G062500(AS)	POPTR_0001s13240	sp|Q93ZM9|TIF9_ARATH	Protein TIFY 9 OS=Arabidopsis thaliana GN=TIFY9 PE=1 SV=1	AT5G13220.1	| Symbols: JAZ10, TIFY9, JAS1 | jasmonate-zim-domain protein 10 | chr5:4219001-4220502 FORWARD LENGTH=197	LOC_Os04g32480.1	protein|zinc-finger protein, putative, expressed	NA	NA	GO:0007165|signal transduction GO:0009414|response to water deprivation GO:0009611|response to wounding GO:0009620|response to fungus GO:0009695|jasmonic acid biosynthetic process GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009753|response to jasmonic acid stimulus GO:0009867|jasmonic acid mediated signaling pathway GO:0010112|regulation of systemic acquired resistance GO:0042538|hyperosmotic salinity response GO:2000022|regulation of jasmonic acid mediated signaling pathway	GO:0005515|protein binding GO:0042803|protein homodimerization activity	GO:0005634|nucleus
pt2_01362	B	B2S	Potri.003G004300	Potri.003G004300(BS) Potri.001G165500(BS)	POPTR_0001s13245	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01363	A	A2S	Potri.001G062400	Potri.001G062400(AS) Potri.001G165500(BA)	POPTR_0001s13250	sp|Q5ZA07|C3H41_ORYSJ	E3 ubiquitin-protein ligase makorin OS=Oryza sativa subsp. japonica GN=MKRN PE=2 SV=1	NA	NA	LOC_Os06g21390.4	protein|Zinc finger C-x8-C-x5-C-x3-H type domain containing protein, expressed	NA	NA	NA	GO:0003676|nucleic acid binding GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_01364	B	B4S	Potri.003G004400	Potri.003G004400(BS) Potri.008G203700(BS) Potri.T166900(BS) Potri.007G048500(BS)	POPTR_0001s13260	NA	NA	AT5G28780.1	| Symbols: | PIF1 helicase | chr5:10812907-10814173 REVERSE LENGTH=337	LOC_Os07g45750.1	protein|retrotransposon protein, putative, unclassified, expressed	IMGA|Medtr5g027410.1	ATP-dependent DNA helicase PIF1 chr5 11142764-11148044 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01365	D	D1S	Potri.001G062200	Potri.001G062200(DS)	POPTR_0001s13270	NA	NA	AT5G43400.1	| Symbols: | Uncharacterised conserved protein UCP015417, vWA | chr5:17426182-17428149 REVERSE LENGTH=655	LOC_Os09g32360.1	protein|gp176, putative, expressed	IMGA|Medtr5g045130.1	hypothetical protein chr5 19368847-19372643 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_01366	A	A2S	Potri.001G062100	Potri.001G062100(AS) Potri.003G165300(DS)	POPTR_0001s13280	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_01367	A	A1S	Potri.001G062100	Potri.001G062100(AS)	POPTR_0001s13280	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_01368	A	A2S	Potri.001G062000	Potri.001G062000(AS) Potri.003G165800(DS)	POPTR_0001s13290	NA	NA	AT2G33510.1	| Symbols: | CONTAINS InterPro DOMAIN/s: WW/Rsp5/WWP (InterPro:IPR001202); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28070.1); Has 3898 Blast hits to 1138 proteins in 179 species: Archae - 0; Bacteria - 40; Metazoa - 2353; Fungi - 242; Plants - 298; Viruses - 92; Other Eukaryotes - 873 (source: NCBI BLink). | chr2:14194195-14195473 FORWARD LENGTH=189	LOC_Os02g31140.1	protein|major ampullate spidroin 2-2, putative, expressed	NA	NA	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01369	A	A2S	Potri.001G061900	Potri.001G061900(AS) Potri.003G165900(DS)	POPTR_0001s13300	NA	NA	AT5G13190.1	| Symbols: | CONTAINS InterPro DOMAIN/s: LPS-induced tumor necrosis factor alpha factor (InterPro:IPR006629); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:4204987-4206205 REVERSE LENGTH=134	LOC_Os02g31100.1	protein|LITAF-domain-containing protein, putative, expressed	NA	NA	GO:0006612|protein targeting to membrane GO:0009646|response to absence of light GO:0009863|salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010363|regulation of plant-type hypersensitive response GO:0030968|endoplasmic reticulum unfolded protein response GO:0034051|negative regulation of plant-type hypersensitive response	GO:0005515|protein binding	GO:0005886|plasma membrane
pt2_01370	A	A1S	Potri.001G061800	Potri.001G061800(AS)	POPTR_0001s13310	sp|Q9C7E8|COL15_ARATH	Zinc finger protein CONSTANS-LIKE 15 OS=Arabidopsis thaliana GN=COL15 PE=2 SV=1	AT1G28050.1	| Symbols: | B-box type zinc finger protein with CCT domain | chr1:9775768-9777657 REVERSE LENGTH=433	LOC_Os08g42440.1	protein|CCT/B-box zinc finger protein, putative, expressed	IMGA|Medtr5g069480.1	Zinc finger protein CONSTANS-like protein chr5 28470900-28474190 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0007623|circadian rhythm	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_01371	A	A1S	Potri.001G061700	Potri.001G061700(AS)	POPTR_0001s13320	sp|Q94AG2|SERK1_ARATH	Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2	AT1G71830.1	| Symbols: SERK1, ATSERK1 | somatic embryogenesis receptor-like kinase 1 | chr1:27018575-27021842 FORWARD LENGTH=625	LOC_Os11g31530.1	protein|BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	IMGA|Medtr5g087840.1	Somatic embryogenesis receptor kinase chr5 37094332-37091040 F EGN_Mt100125 20111014	GO:0000226|microtubule cytoskeleton organization GO:0006468|protein phosphorylation GO:0007030|Golgi organization GO:0007062|sister chromatid cohesion GO:0009556|microsporogenesis GO:0009742|brassinosteroid mediated signaling pathway GO:0009793|embryo development ending in seed dormancy GO:0009880|embryonic pattern specification GO:0010072|primary shoot apical meristem specification GO:0010152|pollen maturation GO:0010227|floral organ abscission GO:0010228|vegetative to reproductive phase transition of meristem GO:0010431|seed maturation GO:0016310|phosphorylation GO:0042742|defense response to bacterium GO:0045595|regulation of cell differentiation GO:0046777|protein autophosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004675|transmembrane receptor protein serine/threonine kinase activity GO:0005515|protein binding GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0033612|receptor serine/threonine kinase binding GO:0042802|identical protein binding	GO:0005886|plasma membrane GO:0043234|protein complex
pt2_01372	A	A1S	Potri.001G061600	Potri.001G061600(AS)	POPTR_0001s13330	sp|Q94AG2|SERK1_ARATH	Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2	AT5G21090.1	| Symbols: | Leucine-rich repeat (LRR) family protein | chr5:7164758-7166904 FORWARD LENGTH=218	LOC_Os01g59440.1	protein|BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed	IMGA|Medtr5g087840.1	Somatic embryogenesis receptor kinase chr5 37094332-37091040 F EGN_Mt100125 20111014	GO:0006096|glycolysis GO:0006833|water transport GO:0006972|hyperosmotic response GO:0007030|Golgi organization GO:0007165|signal transduction GO:0009266|response to temperature stimulus GO:0009627|systemic acquired resistance GO:0009651|response to salt stress GO:0034976|response to endoplasmic reticulum stress GO:0042744|hydrogen peroxide catabolic process GO:0046686|response to cadmium ion	NA	GO:0005886|plasma membrane
pt2_01373	A	A1S	Potri.001G061500	Potri.001G061500(AS)	POPTR_0001s13340	sp|O22799|Y2349_ARATH	Uncharacterized protein At2g33490 OS=Arabidopsis thaliana GN=At2g33490 PE=1 SV=2	AT2G33490.1	| Symbols: | hydroxyproline-rich glycoprotein family protein | chr2:14183552-14187666 FORWARD LENGTH=623	LOC_Os09g33510.2	protein|hydroxyproline-rich glycoprotein family protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_01374	A	A2S	Potri.001G061400	Potri.001G061400(AS) Potri.003G166400(DS)	POPTR_0001s13350	sp|Q38799|ODPB_ARATH	Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Arabidopsis thaliana GN=PDH2 PE=1 SV=2	AT5G50850.1	| Symbols: MAB1 | Transketolase family protein | chr5:20689671-20692976 FORWARD LENGTH=363	LOC_Os08g42410.1	protein|transketolase, putative, expressed	NA	NA	GO:0006096|glycolysis GO:0008152|metabolic process GO:0009060|aerobic respiration GO:0009744|response to sucrose stimulus GO:0009749|response to glucose stimulus GO:0009750|response to fructose stimulus GO:0019722|calcium-mediated signaling GO:0042742|defense response to bacterium GO:0046686|response to cadmium ion	GO:0003824|catalytic activity GO:0004739|pyruvate dehydrogenase (acetyl-transferring) activity	GO:0005730|nucleolus GO:0005739|mitochondrion GO:0005774|vacuolar membrane GO:0048046|apoplast
pt2_01375	A	A1S	Potri.001G061300	Potri.001G061300(AS)	POPTR_0001s13360	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01376	G	G1	NA	NA	POPTR_0001s13370	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01377	A	A1S	Potri.001G061200	Potri.001G061200(AS)	POPTR_0001s13380	sp|O49255|NAC29_ARATH	NAC domain-containing protein 29 OS=Arabidopsis thaliana GN=NAC029 PE=2 SV=1	AT5G13180.1	| Symbols: ANAC083, VNI2, NAC083 | NAC domain containing protein 83 | chr5:4196643-4197577 FORWARD LENGTH=252	LOC_Os07g37920.1	protein|no apical meristem protein, putative, expressed	IMGA|Medtr5g041940.1	NAC domain protein chr5 18013715-18012368 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0006612|protein targeting to membrane GO:0007275|multicellular organismal development GO:0009651|response to salt stress GO:0009737|response to abscisic acid stimulus GO:0009741|response to brassinosteroid stimulus GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010089|xylem development GO:0010150|leaf senescence GO:0010363|regulation of plant-type hypersensitive response GO:0045892|negative regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding	GO:0005634|nucleus
pt2_01378	A	A1S	Potri.001G061100	Potri.001G061100(AS)	POPTR_0001s13390	sp|Q9C104|GDE1_SCHPO	Glycerophosphodiester phosphodiesterase gde1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gde1 PE=1 SV=1	AT3G02040.1	| Symbols: SRG3 | senescence-related gene 3 | chr3:348505-349909 REVERSE LENGTH=361	LOC_Os02g31030.1	protein|glycerophosphoryl diester phosphodiesterase family protein, putative, expressed	NA	NA	GO:0006071|glycerol metabolic process GO:0006629|lipid metabolic process GO:0030643|cellular phosphate ion homeostasis GO:0046686|response to cadmium ion	GO:0008081|phosphoric diester hydrolase activity GO:0008889|glycerophosphodiester phosphodiesterase activity	GO:0005737|cytoplasm GO:0009536|plastid
pt2_01379	A	A1S	Potri.001G061000	Potri.001G061000(AS)	POPTR_0001s13400	sp|O35459|ECH1_MOUSE	Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Mus musculus GN=Ech1 PE=2 SV=1	AT5G43280.1	| Symbols: ATDCI1, DCI1 | delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 | chr5:17367947-17369113 FORWARD LENGTH=278	LOC_Os01g70090.1	protein|enoyl-CoA hydratase/isomerase family protein, putative, expressed	NA	NA	GO:0006635|fatty acid beta-oxidation GO:0008152|metabolic process GO:0009062|fatty acid catabolic process GO:0009845|seed germination	GO:0003824|catalytic activity GO:0004300|enoyl-CoA hydratase activity GO:0051750|delta3,5-delta2,4-dienoyl-CoA isomerase activity	GO:0005739|mitochondrion GO:0005777|peroxisome
pt2_01380	A	A1S	Potri.001G060900	Potri.001G060900(AS)	POPTR_0001s13410	sp|Q9FY94|SWT15_ARATH	Bidirectional sugar transporter SWEET15 OS=Arabidopsis thaliana GN=SWEET15 PE=2 SV=1	AT5G13170.1	| Symbols: SAG29, SWEET15, AtSWEET15 | senescence-associated gene 29 | chr5:4181331-4183171 REVERSE LENGTH=292	LOC_Os11g31190.1	protein|nodulin MtN3 family protein, putative, expressed	IMGA|Medtr5g067530.1	Protein RUPTURED POLLEN GRAIN chr5 27562869-27565164 E EGN_Mt100125 20111014	GO:0010150|leaf senescence GO:0015770|sucrose transport GO:0071215|cellular response to abscisic acid stimulus GO:0071446|cellular response to salicylic acid stimulus GO:0071470|cellular response to osmotic stress	GO:0008515|sucrose transmembrane transporter activity GO:0051119|sugar transmembrane transporter activity	GO:0005886|plasma membrane GO:0005887|integral to plasma membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_01381	A	A1S	Potri.001G060800	Potri.001G060800(AS)	POPTR_0001s13420	sp|Q9FE20|PBS1_ARATH	Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1	AT5G13160.1	| Symbols: PBS1 | Protein kinase superfamily protein | chr5:4176854-4179682 FORWARD LENGTH=456	LOC_Os02g30900.1	protein|protein kinase domain containing protein, expressed	IMGA|Medtr5g092120.1	Serine/threonine protein kinase chr5 39187993-39185584 F EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0006952|defense response GO:0009816|defense response to bacterium, incompatible interaction GO:0042742|defense response to bacterium GO:0046777|protein autophosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005515|protein binding GO:0016301|kinase activity	GO:0005886|plasma membrane
pt2_01382	A	A1S	Potri.001G060700	Potri.001G060700(AS)	POPTR_0001s13430	sp|O54922|EXOC7_RAT	Exocyst complex component 7 OS=Rattus norvegicus GN=Exoc7 PE=2 SV=1	AT5G13150.1	| Symbols: ATEXO70C1, EXO70C1 | exocyst subunit exo70 family protein C1 | chr5:4172969-4174930 REVERSE LENGTH=653	LOC_Os11g06700.1	protein|exo70 exocyst complex subunit, putative, expressed	IMGA|Medtr5g073450.1	Exocyst complex component chr5 30274154-30276420 E EGN_Mt100125 20111014	GO:0006887|exocytosis GO:0006904|vesicle docking involved in exocytosis GO:0009827|plant-type cell wall modification GO:0009860|pollen tube growth	NA	GO:0000145|exocyst GO:0005634|nucleus GO:0090406|pollen tube
pt2_01383	A	A2S	Potri.001G060600	Potri.001G060600(AS) Potri.003G167000(DS)	POPTR_0001s13440	sp|Q7G8Y5|GRXC1_ORYSJ	Glutaredoxin-C1 OS=Oryza sativa subsp. japonica GN=GRXC1 PE=3 SV=1	AT5G14070.1	| Symbols: ROXY2 | Thioredoxin superfamily protein | chr5:4541915-4542337 FORWARD LENGTH=140	ChrUn.fgenesh.mRNA.94	protein|expressed protein	IMGA|Medtr5g077550.1	Glutaredoxin-C9 chr5 32105415-32105044 H EGN_Mt100125 20111014	GO:0045454|cell redox homeostasis GO:0045892|negative regulation of transcription, DNA-dependent GO:0048653|anther development	GO:0005515|protein binding GO:0009055|electron carrier activity GO:0015035|protein disulfide oxidoreductase activity	GO:0005575|cellular_component
pt2_01384	A	A2S	Potri.001G060500	Potri.001G060500(AS) Potri.003G167100(DS)	POPTR_0001s13450	NA	NA	AT5G13140.1	| Symbols: | Pollen Ole e 1 allergen and extensin family protein | chr5:4170688-4171744 REVERSE LENGTH=267	LOC_Os09g32988.1	protein|POEI18 - Pollen Ole e I allergen and extensin family protein precursor, expressed	NA	NA	GO:0000271|polysaccharide biosynthetic process GO:0007389|pattern specification process GO:0008150|biological_process GO:0008361|regulation of cell size GO:0009825|multidimensional cell growth GO:0009926|auxin polar transport GO:0009932|cell tip growth GO:0010015|root morphogenesis GO:0010817|regulation of hormone levels GO:0019344|cysteine biosynthetic process GO:0040007|growth GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0048767|root hair elongation GO:0071555|cell wall organization	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_01385	A	A1S	Potri.001G060400	Potri.001G060400(AS)	POPTR_0001s13460	NA	NA	AT5G50760.1	| Symbols: | SAUR-like auxin-responsive protein family | chr5:20644780-20645331 FORWARD LENGTH=183	LOC_Os01g70050.1	protein|OsSAUR3 - Auxin-responsive SAUR gene family member, expressed	NA	NA	GO:0009733|response to auxin stimulus GO:0010167|response to nitrate GO:0015706|nitrate transport	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_01386	A	A1S	Potri.001G060300	Potri.001G060300(AS)	POPTR_0001s13470	sp|A5UMN6|MTAD_METS3	5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=mtaD PE=3 SV=1	NA	NA	LOC_Os12g28270.1	protein|amidohydrolase, putative, expressed	NA	NA	NA	NA	NA
pt2_01387	A	A1S	Potri.001G060200	Potri.001G060200(AS)	POPTR_0001s13480	sp|Q9ASS6|CP20B_ARATH	Peptidyl-prolyl cis-trans isomerase CYP20-2, chloroplastic OS=Arabidopsis thaliana GN=CYP20-2 PE=1 SV=1	AT5G13120.2	| Symbols: CYP20-2 | cyclophilin 20-2 | chr5:4162714-4164720 REVERSE LENGTH=255	LOC_Os05g01270.1	protein|peptidyl-prolyl cis-trans isomerase, putative, expressed	IMGA|AC225458_18.1	Peptidyl-prolyl cis-trans isomerase AC225458.11 44405-42269 E EGN_Mt100125 20111014	GO:0006457|protein folding GO:0010275|NAD(P)H dehydrogenase complex assembly GO:0019344|cysteine biosynthetic process	GO:0003755|peptidyl-prolyl cis-trans isomerase activity GO:0005515|protein binding GO:0043424|protein histidine kinase binding	GO:0005739|mitochondrion GO:0009507|chloroplast GO:0009533|chloroplast stromal thylakoid GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009543|chloroplast thylakoid lumen GO:0009579|thylakoid GO:0031977|thylakoid lumen
pt2_01388	A	A1S	Potri.001G060100	Potri.001G060100(AS)	POPTR_0001s13490	NA	NA	AT1G69040.1	| Symbols: ACR4 | ACT domain repeat 4 | chr1:25958196-25960079 FORWARD LENGTH=451	LOC_Os08g42080.1	protein|ACR5, putative, expressed	IMGA|Medtr5g047260.1	ACR4 chr5 20288839-20285558 F EGN_Mt100125 20111014	GO:0006521|regulation of cellular amino acid metabolic process GO:0008152|metabolic process GO:0009735|response to cytokinin stimulus	GO:0016597|amino acid binding	GO:0005829|cytosol GO:0009507|chloroplast
pt2_01389	A	A1S	Potri.001G060000	Potri.001G060000(AS)	POPTR_0001s13500	sp|Q9LSD5|TCP20_ARATH	Transcription factor TCP20 OS=Arabidopsis thaliana GN=TCP20 PE=1 SV=1	AT3G27010.1	| Symbols: AT-TCP20, PCF1, TCP20, ATTCP20 | TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20 | chr3:9957810-9958754 REVERSE LENGTH=314	LOC_Os01g69980.1	protein|TCP family transcription factor, putative, expressed	IMGA|Medtr5g039600.1	TCP family transcription factor-like protein chr5 17003724-17002078 E EGN_Mt100125 20111014	GO:0008361|regulation of cell size GO:0009653|anatomical structure morphogenesis GO:1900056|negative regulation of leaf senescence	GO:0000987|core promoter proximal region sequence-specific DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_01390	A	A2S	Potri.001G059900	Potri.001G059900(AS) Potri.003G168000(DS)	POPTR_0001s13510	sp|Q43793|G6PDC_TOBAC	Glucose-6-phosphate 1-dehydrogenase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1	AT5G13110.1	| Symbols: G6PD2 | glucose-6-phosphate dehydrogenase 2 | chr5:4158952-4161640 FORWARD LENGTH=596	LOC_Os07g22350.1	protein|glucose-6-phosphate 1-dehydrogenase, chloroplast precursor, putative, expressed	NA	NA	GO:0006006|glucose metabolic process GO:0009051|pentose-phosphate shunt, oxidative branch GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0004345|glucose-6-phosphate dehydrogenase activity GO:0050661|NADP binding	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_01391	A	A2S	Potri.001G059800	Potri.001G059800(AS) Potri.003G168200(DS)	POPTR_0001s13520	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_01392	A	A1S	Potri.001G059700	Potri.001G059700(AS)	POPTR_0001s13530	NA	NA	AT5G13100.1	| Symbols: | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:4156789-4158235 FORWARD LENGTH=354	LOC_Os01g01295.1	protein|expressed protein	NA	NA	NA	NA	GO:0009507|chloroplast
pt2_01393	A	A3S	Potri.001G251800	Potri.001G251800(AS) Potri.001G059600(AS) Potri.018G056200(BA)	POPTR_0001s13540	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01394	A	A3S	Potri.001G251800	Potri.001G251800(AS) Potri.001G059600(AS) Potri.T009200(AS)	POPTR_0001s13540	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01395	A	A1S	Potri.001G059500	Potri.001G059500(AS)	POPTR_0001s13550	NA	NA	AT1G27990.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52420.1); Has 86 Blast hits to 86 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr1:9752799-9753919 REVERSE LENGTH=271	LOC_Os04g31710.1	protein|expressed protein	IMGA|Medtr1g100470.1	hypothetical protein chr1 29294666-29293622 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_01396	A	A2S	Potri.001G059500	Potri.001G059500(AS) Potri.003G168400(DS)	POPTR_0001s13550	NA	NA	AT1G27990.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52420.1); Has 86 Blast hits to 86 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr1:9752799-9753919 REVERSE LENGTH=271	LOC_Os04g31710.1	protein|expressed protein	IMGA|Medtr1g100470.1	hypothetical protein chr1 29294666-29293622 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_01397	A	A1S	Potri.001G059500	Potri.001G059500(AS)	POPTR_0001s13550	NA	NA	AT1G27990.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52420.1); Has 86 Blast hits to 86 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr1:9752799-9753919 REVERSE LENGTH=271	LOC_Os04g31710.1	protein|expressed protein	IMGA|Medtr1g100470.1	hypothetical protein chr1 29294666-29293622 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component
pt2_01398	A	A2S	Potri.001G059400	Potri.001G059400(AS) Potri.001G059300(AA)	POPTR_0001s13560	NA	NA	AT5G13090.1	| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:4153758-4154567 REVERSE LENGTH=269	LOC_Os02g30420.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_01399	A	A1S	Potri.001G059100	Potri.001G059100(AS)	POPTR_0001s13570	NA	NA	AT5G14090.1	| Symbols: | unknown protein; Has 56 Blast hits to 56 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 46; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). | chr5:4547230-4549214 FORWARD LENGTH=358	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01400	A	A1S	Potri.001G059000	Potri.001G059000(AS)	POPTR_0001s13580	sp|Q9C509|SGPL_ARATH	Sphingosine-1-phosphate lyase OS=Arabidopsis thaliana GN=At1g27980 PE=2 SV=1	AT1G27980.1	| Symbols: DPL1, ATDPL1 | dihydrosphingosine phosphate lyase | chr1:9748812-9752618 FORWARD LENGTH=544	LOC_Os01g01080.3	protein|decarboxylase, putative, expressed	NA	NA	GO:0006520|cellular amino acid metabolic process GO:0006635|fatty acid beta-oxidation GO:0006888|ER to Golgi vesicle-mediated transport GO:0009407|toxin catabolic process GO:0019752|carboxylic acid metabolic process GO:0030149|sphingolipid catabolic process GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	GO:0003824|catalytic activity GO:0016831|carboxy-lyase activity GO:0030170|pyridoxal phosphate binding	GO:0005783|endoplasmic reticulum GO:0016020|membrane
pt2_01401	A	A1S	Potri.001G058900	Potri.001G058900(AS)	POPTR_0001s13590	sp|Q9FF46|AB28G_ARATH	ABC transporter G family member 28 OS=Arabidopsis thaliana GN=ABCG28 PE=3 SV=1	AT5G60740.1	| Symbols: | ABC transporter family protein | chr5:24425824-24430269 REVERSE LENGTH=1109	LOC_Os11g22350.1	protein|white-brown complex homolog protein, putative, expressed	IMGA|Medtr1g094660.1	ABC transporter G family member chr1 26848968-26856489 E EGN_Mt100125 20111014	NA	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	NA
pt2_01402	C	C1S	Potri.001G058800	Potri.001G058800(CS)	sp|Q9FYA2|WRK75_ARATH	Probable WRKY transcription factor 75 OS=Arabidopsis thaliana GN=WRKY75 PE=2 SV=1	AT5G13080.1	| Symbols: WRKY75, ATWRKY75 | WRKY DNA-binding protein 75 | chr5:4149928-4151019 REVERSE LENGTH=145	LOC_Os11g29870.1	protein|WRKY72, expressed	IMGA|Medtr1g086790.1	WRKY transcription factor chr1 23203731-23201879 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009723|response to ethylene stimulus GO:0016036|cellular response to phosphate starvation GO:0019375|galactolipid biosynthetic process GO:0032107|regulation of response to nutrient levels GO:0042631|cellular response to water deprivation GO:0043620|regulation of DNA-dependent transcription in response to stress GO:0048527|lateral root development	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_01403	C	C1S	Potri.001G058800	Potri.001G058800(CS)	sp|Q9FYA2|WRK75_ARATH	Probable WRKY transcription factor 75 OS=Arabidopsis thaliana GN=WRKY75 PE=2 SV=1	AT5G13080.1	| Symbols: WRKY75, ATWRKY75 | WRKY DNA-binding protein 75 | chr5:4149928-4151019 REVERSE LENGTH=145	LOC_Os11g29870.1	protein|WRKY72, expressed	IMGA|Medtr1g086790.1	WRKY transcription factor chr1 23203731-23201879 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009723|response to ethylene stimulus GO:0016036|cellular response to phosphate starvation GO:0019375|galactolipid biosynthetic process GO:0032107|regulation of response to nutrient levels GO:0042631|cellular response to water deprivation GO:0043620|regulation of DNA-dependent transcription in response to stress GO:0048527|lateral root development	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_01404	A	A1S	Potri.001G058700	Potri.001G058700(AS)	POPTR_0001s13620	NA	NA	AT1G24267.1	| Symbols: | Protein of unknown function (DUF1664) | chr1:8604451-8607241 REVERSE LENGTH=343	LOC_Os01g01070.3	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_01405	A	A1S	Potri.001G058600	Potri.001G058600(AS)	POPTR_0001s13630	sp|Q6YZE8|SPL16_ORYSJ	Squamosa promoter-binding-like protein 16 OS=Oryza sativa subsp. japonica GN=SPL16 PE=2 SV=1	AT5G50570.2	| Symbols: SPL13A, SPL13 | Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein | chr5:20582555-20583791 REVERSE LENGTH=359	LOC_Os08g41940.1	protein|OsSPL16 - SBP-box gene family member, expressed	IMGA|Medtr5g046670.1	Squamosa promoter binding protein chr5 20048386-20043614 E EGN_Mt100125 20111014	GO:0048653|anther development	GO:0003677|DNA binding	GO:0005634|nucleus
pt2_01406	A	A1S	Potri.001G058500	Potri.001G058500(AS)	POPTR_0001s13640	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01407	A	A1S	Potri.001G058400	Potri.001G058400(AS)	POPTR_0001s13650	sp|Q03489|AGL9_PETHY	Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida GN=FBP2 PE=1 SV=2	AT1G24260.1	| Symbols: SEP3, AGL9 | K-box region and MADS-box transcription factor family protein | chr1:8593790-8595862 REVERSE LENGTH=250	LOC_Os09g32948.1	protein|OsMADS8 - MADS-box family gene with MIKCc type-box, expressed	IMGA|Medtr5g046790.1	MADS-box protein BM5A chr5 20099500-20092621 E EGN_Mt100125 20111014	GO:0001708|cell fate specification GO:0006355|regulation of transcription, DNA-dependent GO:0009908|flower development GO:0010093|specification of floral organ identity GO:0048440|carpel development GO:0048481|ovule development GO:0048507|meristem development GO:0048833|specification of floral organ number	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0005515|protein binding GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_01408	C	C1S	Potri.001G058200	Potri.001G058200(CS)	sp|Q0D4T4|MAD18_ORYSJ	MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica GN=MADS18 PE=1 SV=1	AT2G03710.3	| Symbols: SEP4, AGL3 | K-box region and MADS-box transcription factor family protein | chr2:1129622-1131242 FORWARD LENGTH=187	LOC_Os07g41370.1	protein|OsMADS18 - MADS-box family gene with MIKCc type-box, expressed	IMGA|Medtr5g046790.1	MADS-box protein BM5A chr5 20099500-20092621 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0010048|vernalization response GO:0010076|maintenance of floral meristem identity GO:0043481|anthocyanin accumulation in tissues in response to UV light GO:0048440|carpel development GO:0048441|petal development GO:0048442|sepal development GO:0048443|stamen development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0046983|protein dimerization activity	GO:0005634|nucleus
pt2_01409	A	A1S	Potri.001G058100	Potri.001G058100(AS)	POPTR_0001s13670	NA	NA	AT1G27290.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 44 Blast hits to 44 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:9481788-9482576 FORWARD LENGTH=142	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_01410	A	A1S	Potri.001G058100	Potri.001G058100(AS)	POPTR_0001s13670	NA	NA	AT1G27290.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 44 Blast hits to 44 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:9481788-9482576 FORWARD LENGTH=142	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_01411	A	A1S	Potri.001G058000	Potri.001G058000(AS)	POPTR_0001s13680	NA	NA	AT3G48660.1	| Symbols: | Protein of unknown function (DUF 3339) | chr3:18029659-18030133 FORWARD LENGTH=89	LOC_Os01g69890.1	protein|expressed protein	IMGA|contig_84074_1.1	Unknown protein contig_84074 595-1844 E PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_01412	A	A2S	Potri.001G057900	Potri.001G057900(AS) Potri.003G170500(DS)	POPTR_0001s13690	NA	NA	AT5G08391.1	| Symbols: | Protein of unknown function (DUF 3339) | chr5:2699357-2699566 FORWARD LENGTH=69	LOC_Os11g30360.1	protein|expressed protein	IMGA|contig_84074_1.1	Unknown protein contig_84074 595-1844 E PREDN 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_01413	A	A1S	Potri.001G057800	Potri.001G057800(AS)	POPTR_0001s13700	sp|Q9FYG2|CMTA4_ARATH	Calmodulin-binding transcription activator 4 OS=Arabidopsis thaliana GN=CMTA4 PE=1 SV=1	AT1G67310.1	| Symbols: | Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains | chr1:25198182-25203126 REVERSE LENGTH=1016	LOC_Os04g31900.1	protein|calmodulin-binding transcription activator 4, putative, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0005516|calmodulin binding	GO:0005634|nucleus GO:0005829|cytosol
pt2_01414	A	A1S	Potri.001G057700	Potri.001G057700(AS)	POPTR_0001s13710	NA	NA	AT1G27300.1	| Symbols: | unknown protein; Has 54 Blast hits to 54 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 6; Plants - 34; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). | chr1:9483324-9484194 FORWARD LENGTH=200	LOC_Os02g30610.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0005515|protein binding	GO:0005575|cellular_component GO:0005634|nucleus GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_01415	A	A1S	Potri.001G057600	Potri.001G057600(AS)	POPTR_0001s13720	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01416	A	A1S	Potri.001G057500	Potri.001G057500(AS)	POPTR_0001s13730	sp|Q9C7F5|NTF2_ARATH	Nuclear transport factor 2 OS=Arabidopsis thaliana GN=NTF2 PE=2 SV=1	AT1G27970.1	| Symbols: NTF2B | nuclear transport factor 2B | chr1:9746921-9747787 FORWARD LENGTH=126	LOC_Os08g42000.1	protein|nuclear transport factor, putative, expressed	NA	NA	GO:0006605|protein targeting GO:0006606|protein import into nucleus GO:0006612|protein targeting to membrane GO:0006810|transport GO:0006820|anion transport GO:0006862|nucleotide transport GO:0006869|lipid transport GO:0006888|ER to Golgi vesicle-mediated transport GO:0006891|intra-Golgi vesicle-mediated transport GO:0006913|nucleocytoplasmic transport GO:0006944|cellular membrane fusion GO:0010351|lithium ion transport GO:0010363|regulation of plant-type hypersensitive response GO:0015696|ammonium transport GO:0015802|basic amino acid transport GO:0016192|vesicle-mediated transport GO:0016558|protein import into peroxisome matrix GO:0043069|negative regulation of programmed cell death GO:0043090|amino acid import GO:0043269|regulation of ion transport	GO:0008536|Ran GTPase binding GO:0008565|protein transporter activity	GO:0005622|intracellular GO:0005634|nucleus GO:0005635|nuclear envelope GO:0005737|cytoplasm GO:0005829|cytosol GO:0005886|plasma membrane
pt2_01417	A	A1S	Potri.001G057400	Potri.001G057400(AS)	POPTR_0001s13740	sp|Q9C5U1|AHK3_ARATH	Histidine kinase 3 OS=Arabidopsis thaliana GN=AHK3 PE=1 SV=1	AT1G27320.1	| Symbols: AHK3, HK3 | histidine kinase 3 | chr1:9487780-9492027 FORWARD LENGTH=1036	LOC_Os01g69920.1	protein|histidine kinase, putative, expressed	IMGA|Medtr5g097410.1	Histidine kinase cytokinin receptor chr5 41625969-41632413 E EGN_Mt100125 20111014	GO:0000160|two-component signal transduction system (phosphorelay) GO:0000303|response to superoxide GO:0006355|regulation of transcription, DNA-dependent GO:0006635|fatty acid beta-oxidation GO:0006970|response to osmotic stress GO:0007165|signal transduction GO:0007623|circadian rhythm GO:0008219|cell death GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009651|response to salt stress GO:0009736|cytokinin mediated signaling pathway GO:0009755|hormone-mediated signaling pathway GO:0009863|salicylic acid mediated signaling pathway GO:0009873|ethylene mediated signaling pathway GO:0009909|regulation of flower development GO:0010029|regulation of seed germination GO:0010087|phloem or xylem histogenesis GO:0010150|leaf senescence GO:0010271|regulation of chlorophyll catabolic process GO:0016036|cellular response to phosphate starvation GO:0016310|phosphorylation GO:0016558|protein import into peroxisome matrix GO:0018106|peptidyl-histidine phosphorylation GO:0031537|regulation of anthocyanin metabolic process GO:0034757|negative regulation of iron ion transport GO:0042742|defense response to bacterium GO:0048509|regulation of meristem development GO:0048831|regulation of shoot development GO:0070417|cellular response to cold GO:0071215|cellular response to abscisic acid stimulus GO:0071329|cellular response to sucrose stimulus	GO:0000155|two-component sensor activity GO:0000156|two-component response regulator activity GO:0004673|protein histidine kinase activity GO:0004871|signal transducer activity GO:0005034|osmosensor activity GO:0005515|protein binding GO:0005524|ATP binding GO:0009884|cytokinin receptor activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0043424|protein histidine kinase binding	GO:0005886|plasma membrane
pt2_01418	A	A4S	Potri.001G057300	Potri.001G057300(AS) Potri.003G171200(DS) Potri.001G057200(DS) Potri.003G171100(DS)	POPTR_0001s13750	NA	NA	AT1G27330.1	| Symbols: | Ribosome associated membrane protein RAMP4 | chr1:9493064-9493898 FORWARD LENGTH=68	LOC_Os12g32950.1	protein|membrane protein, putative, expressed	NA	NA	GO:0006979|response to oxidative stress GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_01419	A	A1S	Potri.001G057200	Potri.001G057200(AS)	POPTR_0001s13760	sp|Q9QYI4|DJB12_MOUSE	DnaJ homolog subfamily B member 12 OS=Mus musculus GN=Dnajb12 PE=2 SV=2	AT5G53150.1	| Symbols: | DNAJ heat shock N-terminal domain-containing protein | chr5:21554935-21557202 FORWARD LENGTH=726	LOC_Os04g31940.1	protein|dnaJ domain containing protein, expressed	IMGA|Medtr5g097170.1	Curved DNA-binding protein chr5 41502165-41505408 E EGN_Mt100125 20111014	GO:0006457|protein folding	GO:0031072|heat shock protein binding GO:0051082|unfolded protein binding	GO:0005737|cytoplasm
pt2_01420	A	A1S	Potri.001G057100	Potri.001G057100(AS)	POPTR_0001s13770	sp|Q9FZK1|FBX6_ARATH	F-box only protein 6 OS=Arabidopsis thaliana GN=FBX6 PE=2 SV=1	AT1G27340.1	| Symbols: | Galactose oxidase/kelch repeat superfamily protein | chr1:9495741-9497857 FORWARD LENGTH=467	LOC_Os01g69940.1	protein|OsFBX32 - F-box domain containing protein, expressed	IMGA|Medtr1g018140.1	F-box/kelch-repeat protein chr1 5321626-5322774 E EGN_Mt100125 20111014	GO:0010305|leaf vascular tissue pattern formation GO:0010928|regulation of auxin mediated signaling pathway GO:0060776|simple leaf morphogenesis	GO:0003674|molecular_function	GO:0005634|nucleus
pt2_01421	A	A1S	Potri.001G056900	Potri.001G056900(AS)	POPTR_0001s13780	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01422	A	A1S	Potri.001G056800	Potri.001G056800(AS)	POPTR_0001s13790	sp|Q9FYF9|FB76_ARATH	F-box protein At1g67340 OS=Arabidopsis thaliana GN=At1g67340 PE=1 SV=1	AT1G67340.1	| Symbols: | HCP-like superfamily protein with MYND-type zinc finger | chr1:25230323-25231622 FORWARD LENGTH=379	LOC_Os01g69270.1	protein|OsFBO2 - F-box and other domain containing protein, expressed	NA	NA	GO:0008150|biological_process	GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_01423	A	A2S	Potri.001G056700	Potri.001G056700(AS) Potri.T147200(AS)	POPTR_0001s13800	sp|P10708|CB12_SOLLC	Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1	AT3G61470.1	| Symbols: LHCA2 | photosystem I light harvesting complex gene 2 | chr3:22745736-22747032 FORWARD LENGTH=257	LOC_Os07g38960.1	protein|chlorophyll A-B binding protein, putative, expressed	IMGA|Medtr5g098780.2	Chlorophyll a-b binding protein chr5 42222305-42216869 F EGN_Mt100125 20111014	GO:0009765|photosynthesis, light harvesting GO:0009768|photosynthesis, light harvesting in photosystem I GO:0015979|photosynthesis	GO:0016168|chlorophyll binding	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009579|thylakoid GO:0009782|photosystem I antenna complex GO:0016020|membrane GO:0030076|light-harvesting complex
pt2_01424	A	A2S	Potri.001G056700	Potri.001G056700(AS) Potri.T147200(AS)	POPTR_0001s13800	sp|P10708|CB12_SOLLC	Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1	AT3G61470.1	| Symbols: LHCA2 | photosystem I light harvesting complex gene 2 | chr3:22745736-22747032 FORWARD LENGTH=257	LOC_Os07g38960.1	protein|chlorophyll A-B binding protein, putative, expressed	IMGA|Medtr5g098780.2	Chlorophyll a-b binding protein chr5 42222305-42216869 F EGN_Mt100125 20111014	GO:0009765|photosynthesis, light harvesting GO:0009768|photosynthesis, light harvesting in photosystem I GO:0015979|photosynthesis	GO:0016168|chlorophyll binding	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009579|thylakoid GO:0009782|photosystem I antenna complex GO:0016020|membrane GO:0030076|light-harvesting complex
pt2_01425	A	A3S	Potri.001G056700	Potri.001G056700(AS) Potri.T147200(AS) Potri.003G171500(BS)	POPTR_0001s13800	sp|P10708|CB12_SOLLC	Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1	AT3G61470.1	| Symbols: LHCA2 | photosystem I light harvesting complex gene 2 | chr3:22745736-22747032 FORWARD LENGTH=257	LOC_Os07g38960.1	protein|chlorophyll A-B binding protein, putative, expressed	IMGA|Medtr5g098780.2	Chlorophyll a-b binding protein chr5 42222305-42216869 F EGN_Mt100125 20111014	GO:0009765|photosynthesis, light harvesting GO:0009768|photosynthesis, light harvesting in photosystem I GO:0015979|photosynthesis	GO:0016168|chlorophyll binding	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009579|thylakoid GO:0009782|photosystem I antenna complex GO:0016020|membrane GO:0030076|light-harvesting complex
pt2_01426	A	A3S	Potri.001G056600	Potri.001G056600(AS) Potri.T147300(AS) Potri.003G171800(DS)	POPTR_0001s13810	NA	NA	AT5G43260.1	| Symbols: | chaperone protein dnaJ-related | chr5:17357693-17357986 REVERSE LENGTH=97	LOC_Os02g30320.1	protein|drought-induced protein 1, putative, expressed	NA	NA	NA	NA	GO:0009507|chloroplast
pt2_01427	G	G2	NA	NA	POPTR_0001s13820	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01428	A	A1S	Potri.001G056500	Potri.001G056500(AS)	POPTR_0001s13830	NA	NA	AT1G27385.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF493 (InterPro:IPR007454); Has 76 Blast hits to 76 proteins in 23 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | chr1:9511129-9512820 REVERSE LENGTH=202	LOC_Os02g30410.2	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_01429	D	D1S	Potri.001G056400	Potri.001G056400(DS)	POPTR_0001s13840	NA	NA	NA	NA	LOC_Os11g29630.1	protein|expressed protein	NA	NA	NA	GO:0003824|catalytic activity GO:0030170|pyridoxal phosphate binding	GO:0005886|plasma membrane
pt2_01430	A	A2S	Potri.001G056300	Potri.001G056300(AS) Potri.003G172300(DS)	POPTR_0001s13850	NA	NA	AT1G67330.1	| Symbols: | Protein of unknown function (DUF579) | chr1:25214118-25214993 FORWARD LENGTH=291	LOC_Os11g29780.1	protein|plant-specific domain TIGR01627 family protein, expressed	IMGA|contig_23829_1.1	Expressed protein contig_23829 369-1129 H PREDN 20111014	GO:0008150|biological_process GO:0010167|response to nitrate GO:0015706|nitrate transport	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0005768|endosome GO:0005794|Golgi apparatus GO:0005802|trans-Golgi network
pt2_01431	A	A1S	Potri.001G056200	Potri.001G056200(AS)	POPTR_0001s13860	sp|Q9C7F7|UGPI5_ARATH	Uncharacterized GPI-anchored protein At1g27950 OS=Arabidopsis thaliana GN=At1g27950 PE=1 SV=1	AT1G27950.1	| Symbols: LTPG1 | glycosylphosphatidylinositol-anchored lipid protein transfer 1 | chr1:9740740-9741991 FORWARD LENGTH=193	LOC_Os08g42040.2	protein|LTPL80 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	IMGA|contig_66220_2.1	Non-specific lipid-transfer protein contig_66220 3218-2066 F PREDN 20111014	GO:0006869|lipid transport	GO:0003674|molecular_function	GO:0005886|plasma membrane GO:0031225|anchored to membrane GO:0046658|anchored to plasma membrane
pt2_01432	A	A1S	Potri.001G056200	Potri.001G056200(AS)	POPTR_0001s13860	sp|Q9C7F7|UGPI5_ARATH	Uncharacterized GPI-anchored protein At1g27950 OS=Arabidopsis thaliana GN=At1g27950 PE=1 SV=1	AT1G27950.1	| Symbols: LTPG1 | glycosylphosphatidylinositol-anchored lipid protein transfer 1 | chr1:9740740-9741991 FORWARD LENGTH=193	LOC_Os08g42040.2	protein|LTPL80 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	IMGA|contig_66220_2.1	Non-specific lipid-transfer protein contig_66220 3218-2066 F PREDN 20111014	GO:0006869|lipid transport	GO:0003674|molecular_function	GO:0005886|plasma membrane GO:0031225|anchored to membrane GO:0046658|anchored to plasma membrane
pt2_01433	A	A1S	Potri.001G056200	Potri.001G056200(AS)	POPTR_0001s13860	sp|Q9C7F7|UGPI5_ARATH	Uncharacterized GPI-anchored protein At1g27950 OS=Arabidopsis thaliana GN=At1g27950 PE=1 SV=1	AT1G27950.1	| Symbols: LTPG1 | glycosylphosphatidylinositol-anchored lipid protein transfer 1 | chr1:9740740-9741991 FORWARD LENGTH=193	LOC_Os08g42040.2	protein|LTPL80 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	IMGA|contig_66220_2.1	Non-specific lipid-transfer protein contig_66220 3218-2066 F PREDN 20111014	GO:0006869|lipid transport	GO:0003674|molecular_function	GO:0005886|plasma membrane GO:0031225|anchored to membrane GO:0046658|anchored to plasma membrane
pt2_01434	A	A1S	Potri.001G056100	Potri.001G056100(AS)	POPTR_0001s13870	sp|P59326|YTHD1_MOUSE	YTH domain family protein 1 OS=Mus musculus GN=Ythdf1 PE=2 SV=1	AT3G13060.2	| Symbols: ECT5 | evolutionarily conserved C-terminal region 5 | chr3:4180625-4183632 FORWARD LENGTH=634	LOC_Os08g44200.1	protein|ECT5, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005829|cytosol
pt2_01435	A	A2S	Potri.001G056000	Potri.001G056000(AS) Potri.003G172500(DS)	POPTR_0001s13880	sp|Q8GZ43|YZR3_ARATH	RanBP2-type zinc finger protein At1g67325 OS=Arabidopsis thaliana GN=At1g67325 PE=1 SV=1	AT1G67325.1	| Symbols: | Ran BP2/NZF zinc finger-like superfamily protein | chr1:25209825-25212412 REVERSE LENGTH=287	LOC_Os08g41010.5	protein|zinc finger family protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0009507|chloroplast
pt2_01436	A	A1S	Potri.001G055900	Potri.001G055900(AS)	POPTR_0001s13890	sp|A2YGR5|SPL12_ORYSI	Squamosa promoter-binding-like protein 12 OS=Oryza sativa subsp. indica GN=SPL12 PE=2 SV=1	AT5G43270.1	| Symbols: SPL2 | squamosa promoter binding protein-like 2 | chr5:17360527-17362143 REVERSE LENGTH=419	LOC_Os06g49010.5	protein|OsSPL12 - SBP-box gene family member, expressed	IMGA|Medtr5g046670.1	Squamosa promoter binding protein chr5 20048386-20043614 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0048510|regulation of timing of transition from vegetative to reproductive phase GO:0048653|anther development	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_01437	A	A1S	Potri.001G055700	Potri.001G055700(AS)	POPTR_0001s13900	sp|Q9LQ12|4CLL1_ARATH	4-coumarate--CoA ligase-like 1 OS=Arabidopsis thaliana GN=4CLL1 PE=2 SV=1	AT1G62940.1	| Symbols: ACOS5 | acyl-CoA synthetase 5 | chr1:23310554-23312747 FORWARD LENGTH=542	LOC_Os04g24530.1	protein|AMP-binding domain containing protein, expressed	IMGA|Medtr5g007640.1	4-coumarate CoA ligase chr5 1207155-1213155 E EGN_Mt100125 20111014	GO:0001676|long-chain fatty acid metabolic process GO:0010584|pollen exine formation GO:0046949|fatty-acyl-CoA biosynthetic process GO:0080110|sporopollenin biosynthetic process	GO:0003824|catalytic activity GO:0004467|long-chain fatty acid-CoA ligase activity GO:0016207|4-coumarate-CoA ligase activity GO:0031956|medium-chain fatty acid-CoA ligase activity	GO:0005737|cytoplasm
pt2_01438	A	A1S	Potri.001G055600	Potri.001G055600(AS)	POPTR_0001s13910	NA	NA	AT5G26594.1	| Symbols: ARR24, RR24 | response regulator 24 | chr5:9269282-9270254 FORWARD LENGTH=139	NA	NA	NA	NA	GO:0000160|two-component signal transduction system (phosphorelay) GO:0006355|regulation of transcription, DNA-dependent	GO:0000156|two-component response regulator activity	GO:0009507|chloroplast
pt2_01439	A	A1S	Potri.001G055500	Potri.001G055500(AS)	POPTR_0001s13920	sp|Q9M8Y4|ARR22_ARATH	Two-component response regulator ARR22 OS=Arabidopsis thaliana GN=ARR22 PE=2 SV=1	AT3G04280.3	| Symbols: ARR22, RR22 | response regulator 22 | chr3:1130138-1130689 REVERSE LENGTH=142	NA	NA	NA	NA	GO:0000160|two-component signal transduction system (phosphorelay) GO:0006355|regulation of transcription, DNA-dependent GO:0007623|circadian rhythm GO:0009736|cytokinin mediated signaling pathway GO:0010048|vernalization response	GO:0000156|two-component response regulator activity GO:0008969|phosphohistidine phosphatase activity	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_01440	A	A1S	Potri.001G055400	Potri.001G055400(AS)	POPTR_0001s13930	NA	NA	AT1G67350.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photorespiration; LOCATED IN: mitochondrial membrane, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:25235826-25236122 FORWARD LENGTH=98	LOC_Os03g48110.1	protein|expressed protein	IMGA|contig_61297_1.1	RW1-like protein contig_61297 68-1822 F PREDN 20111014	GO:0006511|ubiquitin-dependent protein catabolic process GO:0009853|photorespiration GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005747|mitochondrial respiratory chain complex I GO:0031966|mitochondrial membrane GO:0045271|respiratory chain complex I
pt2_01441	A	A1S	Potri.001G055300	Potri.001G055300(AS)	POPTR_0001s13940	sp|Q9FYF7|Y1736_ARATH	REF/SRPP-like protein At1g67360 OS=Arabidopsis thaliana GN=At1g67360 PE=2 SV=1	AT1G67360.1	| Symbols: | Rubber elongation factor protein (REF) | chr1:25237072-25237913 REVERSE LENGTH=240	LOC_Os07g47510.1	protein|stress-related protein, putative, expressed	NA	NA	GO:0008150|biological_process	NA	GO:0005737|cytoplasm GO:0005773|vacuole
pt2_01442	A	A1S	Potri.001G055200	Potri.001G055200(AS)	POPTR_0001s13950	sp|Q5M7C8|HORM1_XENLA	HORMA domain-containing protein 1 OS=Xenopus laevis GN=hormad1 PE=2 SV=1	AT1G67370.1	| Symbols: ASY1, ATASY1 | DNA-binding HORMA family protein | chr1:25239347-25243713 REVERSE LENGTH=596	LOC_Os09g32930.3	protein|retrotransposon protein, putative, SINE subclass, expressed	NA	NA	GO:0006302|double-strand break repair GO:0007062|sister chromatid cohesion GO:0007126|meiosis GO:0007129|synapsis GO:0007130|synaptonemal complex assembly GO:0007131|reciprocal meiotic recombination GO:0010212|response to ionizing radiation GO:0010332|response to gamma radiation GO:0032204|regulation of telomere maintenance GO:0032504|multicellular organism reproduction GO:0042138|meiotic DNA double-strand break formation GO:0043247|telomere maintenance in response to DNA damage GO:0045132|meiotic chromosome segregation GO:0051026|chiasma assembly	GO:0003677|DNA binding	GO:0000785|chromatin GO:0000794|condensed nuclear chromosome GO:0005634|nucleus GO:0005654|nucleoplasm
pt2_01443	A	A1S	Potri.001G055100	Potri.001G055100(AS)	POPTR_0001s13960	sp|Q9C7G0|MA658_ARATH	65-kDa microtubule-associated protein 8 OS=Arabidopsis thaliana GN=MAP65-8 PE=1 SV=2	AT1G27920.1	| Symbols: MAP65-8 | microtubule-associated protein 65-8 | chr1:9727106-9729848 FORWARD LENGTH=562	LOC_Os08g41890.1	protein|microtubule associated protein, putative, expressed	IMGA|Medtr5g093860.1	Microtubule-associated protein MAP65-1a chr5 39942422-39947104 E EGN_Mt100125 20111014	GO:0000226|microtubule cytoskeleton organization GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005819|spindle GO:0005874|microtubule GO:0009524|phragmoplast
pt2_01444	A	A1S	Potri.001G055000	Potri.001G055000(AS)	POPTR_0001s13970	NA	NA	AT5G43250.1	| Symbols: NF-YC13 | nuclear factor Y, subunit C13 | chr5:17356174-17356566 REVERSE LENGTH=130	LOC_Os01g08790.1	protein|histone-like transcription factor and archaeal histone, putative, expressed	NA	NA	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_01445	A	A2S	Potri.001G054900	Potri.001G054900(AS) Potri.003G173400(DS)	POPTR_0001s13980	sp|P92792|TOM20_SOLTU	Mitochondrial import receptor subunit TOM20 OS=Solanum tuberosum GN=TOM20 PE=1 SV=1	AT1G27390.1	| Symbols: TOM20-2 | translocase outer membrane 20-2 | chr1:9513469-9514912 REVERSE LENGTH=210	LOC_Os01g69250.1	protein|mitochondrial import receptor subunit TOM20, putative, expressed	NA	NA	GO:0006626|protein targeting to mitochondrion GO:0045040|protein import into mitochondrial outer membrane	GO:0015450|P-P-bond-hydrolysis-driven protein transmembrane transporter activity GO:0046872|metal ion binding	GO:0005739|mitochondrion GO:0005741|mitochondrial outer membrane GO:0005742|mitochondrial outer membrane translocase complex GO:0005743|mitochondrial inner membrane GO:0005744|mitochondrial inner membrane presequence translocase complex GO:0022626|cytosolic ribosome
pt2_01446	A	A1S	Potri.001G054800	Potri.001G054800(AS)	POPTR_0001s13990	sp|O65012|C78A4_PINRA	Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 PE=2 SV=1	AT1G74110.1	| Symbols: CYP78A10 | cytochrome P450, family 78, subfamily A, polypeptide 10 | chr1:27866667-27868368 REVERSE LENGTH=537	LOC_Os11g29720.1	protein|cytochrome P450, putative, expressed	IMGA|Medtr5g045250.1	Cytochrome P450 78A11 chr5 19442194-19440472 E EGN_Mt100125 20111014	GO:0055114|oxidation-reduction process	GO:0005506|iron ion binding GO:0009055|electron carrier activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0019825|oxygen binding GO:0020037|heme binding	GO:0005575|cellular_component GO:0009507|chloroplast
pt2_01447	A	A1S	Potri.001G054700	Potri.001G054700(AS)	POPTR_0001s14000	sp|Q54GB2|CTSL2_DICDI	CTD small phosphatase-like protein 2 OS=Dictyostelium discoideum GN=ctdspl2 PE=3 SV=1	AT5G11860.4	| Symbols: | SCP1-like small phosphatase 5 | chr5:3822024-3823395 REVERSE LENGTH=305	LOC_Os03g63300.1	protein|NLI interacting factor-like phosphatase, putative, expressed	IMGA|Medtr5g045920.1	CTD small phosphatase-like protein chr5 19725690-19724505 H EGN_Mt100125 20111014	GO:0006470|protein dephosphorylation GO:0006914|autophagy	GO:0008420|CTD phosphatase activity GO:0016791|phosphatase activity	GO:0000775|chromosome, centromeric region GO:0005634|nucleus GO:0005694|chromosome GO:0005737|cytoplasm
pt2_01448	A	A1S	Potri.001G054600	Potri.001G054600(AS)	POPTR_0001s14010	sp|Q9FJD5|LAC17_ARATH	Laccase-17 OS=Arabidopsis thaliana GN=LAC17 PE=2 SV=1	AT5G60020.1	| Symbols: LAC17, ATLAC17 | laccase 17 | chr5:24168072-24170223 FORWARD LENGTH=577	LOC_Os01g62480.1	protein|laccase precursor protein, putative, expressed	IMGA|Medtr5g020600.1	Laccase-11 chr5 7633298-7636466 E EGN_Mt100125 20111014	GO:0009698|phenylpropanoid metabolic process GO:0009809|lignin biosynthetic process GO:0010413|glucuronoxylan metabolic process GO:0045492|xylan biosynthetic process GO:0046274|lignin catabolic process GO:0055114|oxidation-reduction process	GO:0005507|copper ion binding GO:0016491|oxidoreductase activity GO:0052716|hydroquinone:oxygen oxidoreductase activity	GO:0005576|extracellular region GO:0048046|apoplast
pt2_01449	A	A2S	Potri.001G054500	Potri.001G054500(AS) Potri.003G173800(BS)	POPTR_0001s14030	sp|Q8RWA7|NDADA_ARATH	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-A OS=Arabidopsis thaliana GN=MEE4 PE=2 SV=1	AT1G04630.1	| Symbols: MEE4 | GRIM-19 protein | chr1:1289921-1290986 REVERSE LENGTH=143	LOC_Os03g09210.1	protein|NADH dehydrogenase 1 alpha subcomplex subunit 13, putative, expressed	NA	NA	GO:0009793|embryo development ending in seed dormancy GO:0009853|photorespiration	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0005747|mitochondrial respiratory chain complex I GO:0009507|chloroplast GO:0031966|mitochondrial membrane GO:0045271|respiratory chain complex I
pt2_01450	A	A1S	Potri.001G054400	Potri.001G054400(AS)	POPTR_0001s14040	sp|Q05046|CH62_CUCMA	Chaperonin CPN60-2, mitochondrial OS=Cucurbita maxima GN=CPN60-2 PE=1 SV=1	AT3G23990.1	| Symbols: HSP60, HSP60-3B | heat shock protein 60 | chr3:8669013-8672278 FORWARD LENGTH=577	LOC_Os10g32550.1	protein|T-complex protein, putative, expressed	IMGA|Medtr1g090130.1	Chaperonin CPN60-2 chr1 24825922-24820135 F EGN_Mt100125 20111014	GO:0006457|protein folding GO:0006626|protein targeting to mitochondrion GO:0007005|mitochondrion organization GO:0009408|response to heat GO:0009644|response to high light intensity GO:0034976|response to endoplasmic reticulum stress GO:0042026|protein refolding GO:0042542|response to hydrogen peroxide GO:0044267|cellular protein metabolic process GO:0046686|response to cadmium ion GO:0051131|chaperone-mediated protein complex assembly	GO:0005507|copper ion binding GO:0005524|ATP binding	GO:0005739|mitochondrion GO:0005759|mitochondrial matrix GO:0005774|vacuolar membrane GO:0005829|cytosol GO:0022626|cytosolic ribosome
pt2_01451	A	A1S	Potri.001G054300	Potri.001G054300(AS)	POPTR_0001s14050	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01452	R	R	NA	NA	POPTR_0001s14060	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01453	A	A1S	Potri.001G054100	Potri.001G054100(AS)	POPTR_0001s14070	NA	NA	AT4G13580.1	| Symbols: | Disease resistance-responsive (dirigent-like protein) family protein | chr4:7900427-7901161 FORWARD LENGTH=244	LOC_Os03g05030.1	protein|dirigent, putative, expressed	NA	NA	NA	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_01454	A	A1S	Potri.001G054000	Potri.001G054000(AS)	POPTR_0001s14080	NA	NA	AT3G24020.1	| Symbols: | Disease resistance-responsive (dirigent-like protein) family protein | chr3:8678827-8679558 FORWARD LENGTH=243	LOC_Os03g05030.1	protein|dirigent, putative, expressed	NA	NA	NA	GO:0003674|molecular_function	GO:0009507|chloroplast
pt2_01455	A	A1S	Potri.001G053900	Potri.001G053900(AS)	POPTR_0001s14090	sp|C4L8H9|THIM_TOLAT	Hydroxyethylthiazole kinase OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=thiM PE=3 SV=1	AT3G24030.1	| Symbols: | hydroxyethylthiazole kinase family protein | chr3:8679862-8680812 REVERSE LENGTH=276	NA	NA	NA	NA	GO:0009228|thiamine biosynthetic process	GO:0003824|catalytic activity GO:0004417|hydroxyethylthiazole kinase activity	GO:0005575|cellular_component
pt2_01456	A	A1S	Potri.001G053800	Potri.001G053800(AS)	POPTR_0001s14100	sp|Q9EPI1|XYLT1_RAT	Xylosyltransferase 1 (Fragment) OS=Rattus norvegicus GN=Xylt1 PE=2 SV=1	AT3G24040.1	| Symbols: | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein | chr3:8681118-8683211 REVERSE LENGTH=417	LOC_Os12g44240.1	protein|N-acetylglucosaminyltransferase, putative, expressed	IMGA|Medtr1g108280.1	Xylosyltransferase chr1 31817214-31813081 E EGN_Mt100125 20111014	GO:0006084|acetyl-CoA metabolic process GO:0016126|sterol biosynthetic process GO:0016132|brassinosteroid biosynthetic process	GO:0008375|acetylglucosaminyltransferase activity GO:0016757|transferase activity, transferring glycosyl groups	GO:0005794|Golgi apparatus GO:0016020|membrane
pt2_01457	A	A1S	Potri.001G053700	Potri.001G053700(AS)	POPTR_0001s14110	NA	NA	AT2G33180.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 57 Blast hits to 57 proteins in 22 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). | chr2:14066479-14067314 FORWARD LENGTH=166	LOC_Os09g30410.2	protein|expressed protein	NA	NA	GO:0006098|pentose-phosphate shunt GO:0008150|biological_process GO:0009073|aromatic amino acid family biosynthetic process GO:0016226|iron-sulfur cluster assembly GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_01458	A	A1S	Potri.001G053700	Potri.001G053700(AS)	POPTR_0001s14110	NA	NA	AT2G33180.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 57 Blast hits to 57 proteins in 22 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). | chr2:14066479-14067314 FORWARD LENGTH=166	LOC_Os09g30410.2	protein|expressed protein	NA	NA	GO:0006098|pentose-phosphate shunt GO:0008150|biological_process GO:0009073|aromatic amino acid family biosynthetic process GO:0016226|iron-sulfur cluster assembly GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_01459	A	A1S	Potri.001G053700	Potri.001G053700(AS)	POPTR_0001s14110	NA	NA	AT2G33180.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 57 Blast hits to 57 proteins in 22 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). | chr2:14066479-14067314 FORWARD LENGTH=166	LOC_Os09g30410.2	protein|expressed protein	NA	NA	GO:0006098|pentose-phosphate shunt GO:0008150|biological_process GO:0009073|aromatic amino acid family biosynthetic process GO:0016226|iron-sulfur cluster assembly GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_01460	A	A1S	Potri.001G053700	Potri.001G053700(AS)	POPTR_0001s14110	NA	NA	AT2G33180.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 57 Blast hits to 57 proteins in 22 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). | chr2:14066479-14067314 FORWARD LENGTH=166	LOC_Os09g30410.2	protein|expressed protein	NA	NA	GO:0006098|pentose-phosphate shunt GO:0008150|biological_process GO:0009073|aromatic amino acid family biosynthetic process GO:0016226|iron-sulfur cluster assembly GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003674|molecular_function	GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_01461	A	A2S	Potri.001G053600	Potri.001G053600(AS) Potri.003G174600(AS)	POPTR_0001s14120	sp|Q9T0H9|GDT12_ARATH	GDT1-like protein 2, chloroplastic OS=Arabidopsis thaliana GN=At4g13590 PE=1 SV=2	AT4G13590.1	| Symbols: | Uncharacterized protein family (UPF0016) | chr4:7901369-7903792 REVERSE LENGTH=359	LOC_Os11g34180.1	protein|uncharacterized protein family UPF0016 domain containing protein, expressed	IMGA|Medtr5g009810.1	Transmembrane protein chr5 2229240-2235151 H EGN_Mt100125 20111014	NA	NA	GO:0009507|chloroplast GO:0009706|chloroplast inner membrane GO:0009941|chloroplast envelope GO:0016020|membrane
pt2_01462	A	A1S	Potri.001G053500	Potri.001G053500(AS)	POPTR_0001s14130	sp|Q8LAU9|GATA1_ARATH	GATA transcription factor 1 OS=Arabidopsis thaliana GN=GATA1 PE=2 SV=2	AT3G24050.1	| Symbols: GATA1 | GATA transcription factor 1 | chr3:8686060-8687462 FORWARD LENGTH=274	LOC_Os04g45650.2	protein|expressed protein	IMGA|Medtr5g007600.1	GATA transcription factor chr5 1186271-1187716 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0007623|circadian rhythm	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding GO:0043565|sequence-specific DNA binding GO:0044212|transcription regulatory region DNA binding	GO:0005634|nucleus
pt2_01463	A	A1S	Potri.001G053400	Potri.001G053400(AS)	POPTR_0001s14140	sp|O49318|Y2317_ARATH	Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1	AT2G33170.1	| Symbols: | Leucine-rich repeat receptor-like protein kinase family protein | chr2:14056371-14059829 REVERSE LENGTH=1124	LOC_Os04g42700.1	protein|receptor-like protein kinase precursor, putative, expressed	IMGA|Medtr1g079520.1	Pentatricopeptide repeat-containing protein chr1 19861760-19847347 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0006486|protein glycosylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_01464	A	A1S	Potri.001G053300	Potri.001G053300(AS)	POPTR_0001s14150	NA	NA	AT3G24060.1	| Symbols: | Plant self-incompatibility protein S1 family | chr3:8689589-8690032 REVERSE LENGTH=147	NA	NA	IMGA|Medtr1g087960.1	Self-incompatibility protein chr1 23774336-23774791 H EGN_Mt100125 20111014	GO:0006863|purine nucleobase transport GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_01465	A	A1S	Potri.001G053200	Potri.001G053200(AS)	POPTR_0001s14160	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006863|purine nucleobase transport GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_01466	A	A1S	Potri.001G053100	Potri.001G053100(AS)	POPTR_0001s14170	NA	NA	AT3G24060.1	| Symbols: | Plant self-incompatibility protein S1 family | chr3:8689589-8690032 REVERSE LENGTH=147	NA	NA	NA	NA	GO:0006863|purine nucleobase transport GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005576|extracellular region
pt2_01467	A	A1S	Potri.001G053000	Potri.001G053000(AS)	POPTR_0001s14180	NA	NA	AT1G04650.1	| Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr1:1294893-1298903 REVERSE LENGTH=997	LOC_Os03g05040.1	protein|expressed protein	IMGA|Medtr1g090050.1	hypothetical protein chr1 24774301-24779924 H EGN_Mt100125 20111014	NA	NA	GO:0005575|cellular_component
pt2_01468	A	A1S	Potri.001G052900	Potri.001G052900(AS)	POPTR_0001s14190	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01469	C	C1S	Potri.001G052800	Potri.001G052800(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01470	A	A1S	Potri.001G052600	Potri.001G052600(AS)	POPTR_0001s14210	NA	NA	AT1G04670.1	| Symbols: | unknown protein; Has 40 Blast hits to 40 proteins in 14 species: Archae - 2; Bacteria - 5; Metazoa - 1; Fungi - 2; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:1301985-1302532 FORWARD LENGTH=126	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	NA
pt2_01471	A	A1S	Potri.001G052500	Potri.001G052500(AS)	POPTR_0001s14220	sp|Q9LHP4|RCH2_ARATH	Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1	AT3G24240.1	| Symbols: | Leucine-rich repeat receptor-like protein kinase family protein | chr3:8780551-8784150 FORWARD LENGTH=1141	LOC_Os04g04330.2	protein|receptor-like protein kinase 2 precursor, putative, expressed	IMGA|Medtr5g045910.1	Receptor-like protein kinase chr5 19714325-19723568 E EGN_Mt100125 20111014	GO:0000041|transition metal ion transport GO:0002237|response to molecule of bacterial origin GO:0006468|protein phosphorylation GO:0007165|signal transduction GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway GO:0010103|stomatal complex morphogenesis GO:0010359|regulation of anion channel activity GO:0048443|stamen development	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	NA
pt2_01472	B	B1S	Potri.001G052400	Potri.001G052400(BS)	POPTR_0001s14230	sp|F6HS55|ITPA_VITVI	Inosine triphosphate pyrophosphatase OS=Vitis vinifera GN=VIT_05s0051g00580 PE=2 SV=1	AT4G13720.1	| Symbols: | Inosine triphosphate pyrophosphatase family protein | chr4:7967166-7968894 REVERSE LENGTH=206	LOC_Os10g31940.1	protein|inosine triphosphate pyrophosphatase, putative, expressed	NA	NA	NA	GO:0016462|pyrophosphatase activity GO:0016787|hydrolase activity	GO:0005737|cytoplasm
pt2_01473	A	A1S	Potri.001G052300	Potri.001G052300(AS)	POPTR_0001s14240	sp|Q944R1|PLY15_ARATH	Probable pectate lyase 15 OS=Arabidopsis thaliana GN=At4g13710 PE=2 SV=1	AT4G13710.1	| Symbols: | Pectin lyase-like superfamily protein | chr4:7962550-7966012 FORWARD LENGTH=470	LOC_Os04g05050.1	protein|pectate lyase precursor, putative, expressed	IMGA|AC235753_8.1	Pectate lyase AC235753.2 24915-27580 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0016829|lyase activity GO:0030570|pectate lyase activity	GO:0005576|extracellular region
pt2_01474	C	C1S	Potri.001G052200	Potri.001G052200(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	GO:0003993|acid phosphatase activity GO:0004722|protein serine/threonine phosphatase activity GO:0016787|hydrolase activity GO:0046872|metal ion binding	GO:0005576|extracellular region
pt2_01475	A	A1S	Potri.001G052100	Potri.001G052100(AS)	POPTR_0001s14260	sp|O23016|KCAB_ARATH	Probable voltage-gated potassium channel subunit beta OS=Arabidopsis thaliana GN=KAB1 PE=1 SV=1	AT1G04690.1	| Symbols: KAB1, KV-BETA1 | potassium channel beta subunit 1 | chr1:1313662-1315420 FORWARD LENGTH=328	LOC_Os02g57240.1	protein|oxidoreductase, aldo/keto reductase family protein, putative, expressed	NA	NA	GO:0006813|potassium ion transport GO:0055085|transmembrane transport	GO:0005267|potassium channel activity	GO:0005737|cytoplasm GO:0005886|plasma membrane GO:0009506|plasmodesma GO:0016020|membrane
pt2_01476	A	A1S	Potri.001G052000	Potri.001G052000(AS)	POPTR_0001s14270	sp|Q55GU0|Y9955_DICDI	Probable serine/threonine-protein kinase DDB_G0267514 OS=Dictyostelium discoideum GN=DDB_G0267514 PE=3 SV=1	AT1G04700.1	| Symbols: | PB1 domain-containing protein tyrosine kinase | chr1:1316919-1320653 FORWARD LENGTH=1042	LOC_Os12g40279.1	protein|protein kinase domain containing protein, expressed	IMGA|Medtr5g023150.1	Dual specificity protein kinase pyk2 chr5 8944735-8953212 E EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004712|protein serine/threonine/tyrosine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005829|cytosol GO:0005886|plasma membrane
pt2_01477	A	A1S	Potri.001G051900	Potri.001G051900(AS)	POPTR_0001s14280	sp|Q56WD9|THIK2_ARATH	3-ketoacyl-CoA thiolase 2, peroxisomal OS=Arabidopsis thaliana GN=PED1 PE=1 SV=2	AT2G33150.1	| Symbols: PKT3, PED1, KAT2 | peroxisomal 3-ketoacyl-CoA thiolase 3 | chr2:14047814-14050983 REVERSE LENGTH=462	LOC_Os02g57260.1	protein|3-ketoacyl-CoA thiolase, peroxisomal precursor, putative, expressed	IMGA|Medtr5g098310.1	"Acetyl-CoA acetyltransferase, cytosolic" chr5 42013142-42007793 F EGN_Mt100125 20111014	GO:0006635|fatty acid beta-oxidation GO:0008152|metabolic process GO:0009407|toxin catabolic process GO:0009611|response to wounding GO:0009695|jasmonic acid biosynthetic process GO:0009789|positive regulation of abscisic acid mediated signaling pathway GO:0010111|glyoxysome organization GO:0019395|fatty acid oxidation GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	GO:0003824|catalytic activity GO:0003988|acetyl-CoA C-acyltransferase activity GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0005730|nucleolus GO:0005739|mitochondrion GO:0005774|vacuolar membrane GO:0005777|peroxisome GO:0009507|chloroplast GO:0016020|membrane
pt2_01478	A	A1S	Potri.001G051800	Potri.001G051800(AS)	POPTR_0001s14290	sp|Q56WD9|THIK2_ARATH	3-ketoacyl-CoA thiolase 2, peroxisomal OS=Arabidopsis thaliana GN=PED1 PE=1 SV=2	AT2G33150.1	| Symbols: PKT3, PED1, KAT2 | peroxisomal 3-ketoacyl-CoA thiolase 3 | chr2:14047814-14050983 REVERSE LENGTH=462	LOC_Os10g31950.1	protein|3-ketoacyl-CoA thiolase, peroxisomal precursor, putative, expressed	IMGA|Medtr5g098310.1	"Acetyl-CoA acetyltransferase, cytosolic" chr5 42013142-42007793 F EGN_Mt100125 20111014	GO:0006635|fatty acid beta-oxidation GO:0008152|metabolic process GO:0009407|toxin catabolic process GO:0009611|response to wounding GO:0009695|jasmonic acid biosynthetic process GO:0009789|positive regulation of abscisic acid mediated signaling pathway GO:0010111|glyoxysome organization GO:0019395|fatty acid oxidation GO:0043161|proteasomal ubiquitin-dependent protein catabolic process GO:0051788|response to misfolded protein GO:0080129|proteasome core complex assembly	GO:0003824|catalytic activity GO:0003988|acetyl-CoA C-acyltransferase activity GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0005730|nucleolus GO:0005739|mitochondrion GO:0005774|vacuolar membrane GO:0005777|peroxisome GO:0009507|chloroplast GO:0016020|membrane
pt2_01479	A	A1S	Potri.001G051700	Potri.001G051700(AS)	POPTR_0001s14300	sp|Q7UJ69|ILVD_RHOBA	Dihydroxy-acid dehydratase OS=Rhodopirellula baltica (strain SH1) GN=ilvD PE=3 SV=2	AT3G23940.1	| Symbols: | dehydratase family | chr3:8648780-8652323 FORWARD LENGTH=608	LOC_Os08g44530.1	protein|dihydroxy-acid dehydratase, putative, expressed	NA	NA	GO:0008152|metabolic process GO:0009082|branched-chain amino acid biosynthetic process GO:0009220|pyrimidine ribonucleotide biosynthetic process GO:0009555|pollen development	GO:0003824|catalytic activity GO:0004160|dihydroxy-acid dehydratase activity GO:0005507|copper ion binding	GO:0009507|chloroplast GO:0009536|plastid GO:0009570|chloroplast stroma
pt2_01480	A	A1S	Potri.001G051600	Potri.001G051600(AS)	POPTR_0001s14310	sp|P48386|CHS1_CAMSI	Chalcone synthase 1 OS=Camellia sinensis GN=CHS1 PE=2 SV=1	AT5G13930.1	| Symbols: CHS, TT4, ATCHS | Chalcone and stilbene synthase family protein | chr5:4488762-4490035 FORWARD LENGTH=395	LOC_Os11g32650.1	protein|chalcone synthase, putative, expressed	IMGA|Medtr5g007760.1	Chalcone synthase chr5 1267204-1268814 E EGN_Mt100125 20111014	GO:0006979|response to oxidative stress GO:0008152|metabolic process GO:0009058|biosynthetic process GO:0009411|response to UV GO:0009611|response to wounding GO:0009629|response to gravity GO:0009715|chalcone biosynthetic process GO:0009718|anthocyanin-containing compound biosynthetic process GO:0009733|response to auxin stimulus GO:0009744|response to sucrose stimulus GO:0009753|response to jasmonic acid stimulus GO:0009813|flavonoid biosynthetic process GO:0009926|auxin polar transport GO:0010224|response to UV-B GO:0031540|regulation of anthocyanin biosynthetic process	GO:0003824|catalytic activity GO:0005515|protein binding GO:0016210|naringenin-chalcone synthase activity GO:0016746|transferase activity, transferring acyl groups GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005783|endoplasmic reticulum GO:0009705|plant-type vacuole membrane
pt2_01481	A	A1S	Potri.001G051500	Potri.001G051500(AS)	POPTR_0001s14320	sp|P48386|CHS1_CAMSI	Chalcone synthase 1 OS=Camellia sinensis GN=CHS1 PE=2 SV=1	AT5G13930.1	| Symbols: CHS, TT4, ATCHS | Chalcone and stilbene synthase family protein | chr5:4488762-4490035 FORWARD LENGTH=395	LOC_Os11g32650.1	protein|chalcone synthase, putative, expressed	IMGA|Medtr5g007760.1	Chalcone synthase chr5 1267204-1268814 E EGN_Mt100125 20111014	GO:0006979|response to oxidative stress GO:0008152|metabolic process GO:0009058|biosynthetic process GO:0009411|response to UV GO:0009611|response to wounding GO:0009629|response to gravity GO:0009715|chalcone biosynthetic process GO:0009718|anthocyanin-containing compound biosynthetic process GO:0009733|response to auxin stimulus GO:0009744|response to sucrose stimulus GO:0009753|response to jasmonic acid stimulus GO:0009813|flavonoid biosynthetic process GO:0009926|auxin polar transport GO:0010224|response to UV-B GO:0031540|regulation of anthocyanin biosynthetic process	GO:0003824|catalytic activity GO:0005515|protein binding GO:0016210|naringenin-chalcone synthase activity GO:0016746|transferase activity, transferring acyl groups GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005783|endoplasmic reticulum GO:0009705|plant-type vacuole membrane
pt2_01482	A	A2S	Potri.001G051400	Potri.001G051400(AS) Potri.003G177000(DS)	POPTR_0001s14330	sp|Q86YJ7|AN13B_HUMAN	Ankyrin repeat domain-containing protein 13B OS=Homo sapiens GN=ANKRD13B PE=2 SV=4	AT1G04780.1	| Symbols: | Ankyrin repeat family protein | chr1:1340891-1342965 REVERSE LENGTH=664	LOC_Os07g25460.1	protein|ankyrin repeat domain containing protein, expressed	IMGA|Medtr1g080310.1	Ankyrin repeat domain-containing protein 13C-B chr1 20193483-20196757 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_01483	A	A2S	Potri.001G051400	Potri.001G051400(AS) Potri.003G177000(DS)	POPTR_0001s14340	sp|Q86YJ7|AN13B_HUMAN	Ankyrin repeat domain-containing protein 13B OS=Homo sapiens GN=ANKRD13B PE=2 SV=4	AT1G04780.1	| Symbols: | Ankyrin repeat family protein | chr1:1340891-1342965 REVERSE LENGTH=664	LOC_Os07g25460.1	protein|ankyrin repeat domain containing protein, expressed	IMGA|Medtr1g080310.1	Ankyrin repeat domain-containing protein 13C-B chr1 20193483-20196757 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005634|nucleus GO:0005886|plasma membrane
pt2_01484	A	A1S	Potri.001G051300	Potri.001G051300(AS)	POPTR_0001s14350	NA	NA	NA	NA	NA	NA	NA	NA	GO:0008150|biological_process GO:0009736|cytokinin mediated signaling pathway	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01485	A	A1S	Potri.001G051200	Potri.001G051200(AS)	POPTR_0001s14360	sp|Q8R1S0|COQ6_MOUSE	Ubiquinone biosynthesis monooxygenase COQ6 OS=Mus musculus GN=Coq6 PE=2 SV=2	AT3G24200.1	| Symbols: | FAD/NAD(P)-binding oxidoreductase family protein | chr3:8748095-8751575 REVERSE LENGTH=505	LOC_Os03g62260.1	protein|FAD binding domain containing protein, expressed	NA	NA	GO:0006744|ubiquinone biosynthetic process GO:0008152|metabolic process GO:0019243|methylglyoxal catabolic process to D-lactate GO:0055114|oxidation-reduction process	GO:0004497|monooxygenase activity GO:0016491|oxidoreductase activity GO:0016709|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen GO:0050660|flavin adenine dinucleotide binding	GO:0005739|mitochondrion
pt2_01486	A	A1S	Potri.001G051100	Potri.001G051100(AS)	POPTR_0001s14370	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01487	A	A1S	Potri.001G051000	Potri.001G051000(AS)	POPTR_0001s14380	sp|Q9M8Y4|ARR22_ARATH	Two-component response regulator ARR22 OS=Arabidopsis thaliana GN=ARR22 PE=2 SV=1	AT5G26594.1	| Symbols: ARR24, RR24 | response regulator 24 | chr5:9269282-9270254 FORWARD LENGTH=139	LOC_Os04g13480.1	protein|response regulator receiver domain containing protein, expressed	NA	NA	GO:0000160|two-component signal transduction system (phosphorelay) GO:0006355|regulation of transcription, DNA-dependent	GO:0000156|two-component response regulator activity	GO:0009507|chloroplast
pt2_01488	A	A1S	Potri.001G050900	Potri.001G050900(AS)	POPTR_0001s14390	sp|Q9M8Y4|ARR22_ARATH	Two-component response regulator ARR22 OS=Arabidopsis thaliana GN=ARR22 PE=2 SV=1	AT3G04280.3	| Symbols: ARR22, RR22 | response regulator 22 | chr3:1130138-1130689 REVERSE LENGTH=142	NA	NA	NA	NA	GO:0000160|two-component signal transduction system (phosphorelay) GO:0006355|regulation of transcription, DNA-dependent GO:0007623|circadian rhythm GO:0009736|cytokinin mediated signaling pathway GO:0010048|vernalization response	GO:0000156|two-component response regulator activity GO:0008969|phosphohistidine phosphatase activity	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_01489	A	A1S	Potri.001G050800	Potri.001G050800(AS)	POPTR_0001s14400	sp|Q9M8Y4|ARR22_ARATH	Two-component response regulator ARR22 OS=Arabidopsis thaliana GN=ARR22 PE=2 SV=1	AT5G26594.1	| Symbols: ARR24, RR24 | response regulator 24 | chr5:9269282-9270254 FORWARD LENGTH=139	LOC_Os03g53100.1	protein|response regulator receiver domain containing protein, expressed	NA	NA	GO:0000160|two-component signal transduction system (phosphorelay) GO:0006355|regulation of transcription, DNA-dependent	GO:0000156|two-component response regulator activity	GO:0009507|chloroplast
pt2_01490	A	A1S	Potri.001G050700	Potri.001G050700(AS)	POPTR_0001s14410	sp|Q55680|Y005_SYNY3	Uncharacterized protein sll0005 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0005 PE=3 SV=1	AT3G24190.1	| Symbols: | Protein kinase superfamily protein | chr3:8743319-8747703 FORWARD LENGTH=793	LOC_Os02g57160.1	protein| ELMO/CED-12 family protein, putative, expressed	IMGA|contig_75251_1.1	Possible protein kinase ABC1 family protein contig_75251 433-1707 E PREDN 20111014	GO:0006468|protein phosphorylation GO:0009744|response to sucrose stimulus GO:0009813|flavonoid biosynthetic process GO:0010224|response to UV-B	GO:0004672|protein kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_01491	A	A1S	Potri.001G050700	Potri.001G050700(AS)	POPTR_0001s14410	sp|Q55680|Y005_SYNY3	Uncharacterized protein sll0005 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0005 PE=3 SV=1	AT3G24190.1	| Symbols: | Protein kinase superfamily protein | chr3:8743319-8747703 FORWARD LENGTH=793	LOC_Os02g57160.1	protein| ELMO/CED-12 family protein, putative, expressed	IMGA|contig_75251_1.1	Possible protein kinase ABC1 family protein contig_75251 433-1707 E PREDN 20111014	GO:0006468|protein phosphorylation GO:0009744|response to sucrose stimulus GO:0009813|flavonoid biosynthetic process GO:0010224|response to UV-B	GO:0004672|protein kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_01492	A	A1S	Potri.001G050700	Potri.001G050700(AS)	POPTR_0001s14410	sp|Q55680|Y005_SYNY3	Uncharacterized protein sll0005 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0005 PE=3 SV=1	AT3G24190.1	| Symbols: | Protein kinase superfamily protein | chr3:8743319-8747703 FORWARD LENGTH=793	LOC_Os02g57160.1	protein| ELMO/CED-12 family protein, putative, expressed	IMGA|contig_75251_1.1	Possible protein kinase ABC1 family protein contig_75251 433-1707 E PREDN 20111014	GO:0006468|protein phosphorylation GO:0009744|response to sucrose stimulus GO:0009813|flavonoid biosynthetic process GO:0010224|response to UV-B	GO:0004672|protein kinase activity GO:0005524|ATP binding GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane GO:0009507|chloroplast
pt2_01493	A	A2S	Potri.001G050600	Potri.001G050600(AS) Potri.003G177600(DS)	POPTR_0001s14420	NA	NA	AT1G04770.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:1336564-1337767 REVERSE LENGTH=303	LOC_Os05g43040.1	protein|tetratricopeptide repeat domain containing protein, expressed	NA	NA	GO:0009658|chloroplast organization	NA	NA
pt2_01494	A	A1S	Potri.001G050400	Potri.001G050400(AS)	POPTR_0001s14430	sp|P47192|VA722_ARATH	Vesicle-associated membrane protein 722 OS=Arabidopsis thaliana GN=VAMP722 PE=2 SV=2	AT2G33120.1	| Symbols: SAR1, VAMP722, ATVAMP722 | synaptobrevin-related protein 1 | chr2:14043785-14045337 REVERSE LENGTH=221	LOC_Os07g09600.1	protein|vesicle-associated membrane protein, putative, expressed	IMGA|Medtr5g089370.1	Vesicle-associated membrane protein 7C chr5 37805654-37809372 F EGN_Mt100125 20111014	GO:0006810|transport GO:0016192|vesicle-mediated transport GO:0048451|petal formation GO:0048453|sepal formation	GO:0003674|molecular_function	GO:0005768|endosome GO:0005886|plasma membrane GO:0009507|chloroplast GO:0016020|membrane GO:0016021|integral to membrane
pt2_01495	A	A1S	Potri.001G050500	Potri.001G050500(AS)	POPTR_0001s14440	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01496	R	R	NA	NA	POPTR_0001s14450	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01497	A	A1S	Potri.001G050200	Potri.001G050200(AS)	POPTR_0001s14460	sp|O49323|CSLD1_ARATH	Cellulose synthase-like protein D1 OS=Arabidopsis thaliana GN=CSLD1 PE=2 SV=1	AT2G33100.1	| Symbols: ATCSLD1, CSLD1 | cellulose synthase-like D1 | chr2:14036494-14040044 REVERSE LENGTH=1036	LOC_Os06g22980.1	protein|CSLD5 - cellulose synthase-like family D, expressed	IMGA|Medtr5g029190.1	Cellulose synthase-like protein chr5 11949044-11944517 E EGN_Mt100125 20111014	GO:0000271|polysaccharide biosynthetic process GO:0009846|pollen germination GO:0030244|cellulose biosynthetic process	GO:0016757|transferase activity, transferring glycosyl groups GO:0016759|cellulose synthase activity GO:0016760|cellulose synthase (UDP-forming) activity	GO:0005794|Golgi apparatus GO:0016020|membrane
pt2_01498	A	A1S	Potri.001G050100	Potri.001G050100(AS)	POPTR_0001s14470	sp|Q9ZVQ6|P2B10_ARATH	F-box protein PP2-B10 OS=Arabidopsis thaliana GN=PP2B10 PE=1 SV=1	AT2G02360.1	| Symbols: AtPP2-B10, PP2-B10 | phloem protein 2-B10 | chr2:619699-620736 REVERSE LENGTH=272	LOC_Os12g03740.1	protein|OsFBX438 - F-box domain containing protein, expressed	IMGA|Medtr1g079370.1	F-box protein PP2-B1 chr1 19775736-19772948 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0030246|carbohydrate binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01499	A	A1S	Potri.001G050100	Potri.001G050100(AS)	POPTR_0001s14470	sp|Q9ZVQ6|P2B10_ARATH	F-box protein PP2-B10 OS=Arabidopsis thaliana GN=PP2B10 PE=1 SV=1	AT2G02360.1	| Symbols: AtPP2-B10, PP2-B10 | phloem protein 2-B10 | chr2:619699-620736 REVERSE LENGTH=272	LOC_Os12g03740.1	protein|OsFBX438 - F-box domain containing protein, expressed	IMGA|Medtr1g079370.1	F-box protein PP2-B1 chr1 19775736-19772948 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0030246|carbohydrate binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01500	A	A1S	Potri.001G050100	Potri.001G050100(AS)	POPTR_0001s14470	sp|Q9ZVQ6|P2B10_ARATH	F-box protein PP2-B10 OS=Arabidopsis thaliana GN=PP2B10 PE=1 SV=1	AT2G02360.1	| Symbols: AtPP2-B10, PP2-B10 | phloem protein 2-B10 | chr2:619699-620736 REVERSE LENGTH=272	LOC_Os12g03740.1	protein|OsFBX438 - F-box domain containing protein, expressed	IMGA|Medtr1g079370.1	F-box protein PP2-B1 chr1 19775736-19772948 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0030246|carbohydrate binding	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01501	A	A1S	Potri.001G050000	Potri.001G050000(AS)	POPTR_0001s14480	sp|Q43621|GSHRC_PEA	Glutathione reductase, cytosolic OS=Pisum sativum PE=2 SV=1	AT3G24170.3	| Symbols: ATGR1, GR1 | glutathione-disulfide reductase | chr3:8729762-8734115 REVERSE LENGTH=499	LOC_Os02g56850.2	protein|glutathione reductase, putative, expressed	IMGA|contig_12681_1.1	Glutathione reductase contig_12681 1554-468 H PREDN 20111014	GO:0006749|glutathione metabolic process GO:0009407|toxin catabolic process GO:0045454|cell redox homeostasis GO:0055114|oxidation-reduction process	GO:0004362|glutathione-disulfide reductase activity GO:0009055|electron carrier activity GO:0016491|oxidoreductase activity GO:0016668|oxidoreductase activity, acting on a sulfur group of donors, NAD or NADP as acceptor GO:0050660|flavin adenine dinucleotide binding GO:0050661|NADP binding	GO:0005737|cytoplasm GO:0005777|peroxisome
pt2_01502	A	A2S	Potri.001G049900	Potri.001G049900(AS) Potri.001G050000(AA)	POPTR_0001s14490	NA	NA	AT4G13670.1	| Symbols: PTAC5 | plastid transcriptionally active 5 | chr4:7948644-7950779 FORWARD LENGTH=387	LOC_Os04g43420.1	protein|PTAC5, putative, expressed	NA	NA	GO:0008152|metabolic process	GO:0031072|heat shock protein binding GO:0051082|unfolded protein binding	GO:0009295|nucleoid GO:0009507|chloroplast GO:0009508|plastid chromosome GO:0009534|chloroplast thylakoid GO:0009535|chloroplast thylakoid membrane GO:0009941|chloroplast envelope
pt2_01503	A	A1S	Potri.001G049800	Potri.001G049800(AS)	POPTR_0001s14500	NA	NA	AT3G24160.1	| Symbols: PMP | putative type 1 membrane protein | chr3:8726241-8729023 FORWARD LENGTH=364	LOC_Os08g45220.2	protein|expressed protein	NA	NA	GO:0000902|cell morphogenesis GO:0006623|protein targeting to vacuole GO:0006816|calcium ion transport GO:0007030|Golgi organization GO:0007033|vacuole organization GO:0008150|biological_process GO:0009651|response to salt stress GO:0016049|cell growth GO:0048193|Golgi vesicle transport	GO:0003674|molecular_function	GO:0005774|vacuolar membrane GO:0005783|endoplasmic reticulum GO:0005794|Golgi apparatus GO:0016020|membrane
pt2_01504	A	A1S	Potri.001G049700	Potri.001G049700(AS)	POPTR_0001s14510	NA	NA	NA	NA	NA	NA	NA	NA	GO:0010067|procambium histogenesis GO:0010087|phloem or xylem histogenesis GO:0010089|xylem development GO:0090506|axillary shoot meristem initiation	GO:0003674|molecular_function GO:0033612|receptor serine/threonine kinase binding	GO:0005739|mitochondrion GO:0048046|apoplast
pt2_01505	A	A1S	Potri.001G049600	Potri.001G049600(AS)	POPTR_0001s14520	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01506	B	B1S	Potri.017G044300	Potri.017G044300(BS)	POPTR_0001s14540	NA	NA	NA	NA	NA	NA	IMGA|contig_57373_1.1	Unknown protein contig_57373 97-3656 H PREDN 20111014	NA	NA	NA
pt2_01507	G	G1	NA	NA	POPTR_0001s14550	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01508	A	A1S	Potri.001G049400	Potri.001G049400(AS)	POPTR_0001s14560	sp|Q9FUY2|LEUNG_ARATH	Transcriptional corepressor LEUNIG OS=Arabidopsis thaliana GN=LUG PE=1 SV=2	AT2G32700.6	| Symbols: LUH | LEUNIG_homolog | chr2:13867235-13871844 FORWARD LENGTH=785	LOC_Os02g56880.1	protein|transcriptional corepressor LEUNIG, putative, expressed	IMGA|Medtr1g011610.1	Transcriptional corepressor LEUNIG chr1 2436342-2425793 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009790|embryo development GO:0009827|plant-type cell wall modification GO:0009908|flower development GO:0045892|negative regulation of transcription, DNA-dependent GO:0048358|mucilage pectin biosynthetic process	GO:0003713|transcription coactivator activity	GO:0005634|nucleus
pt2_01509	C	C1A	Potri.001G049400	Potri.001G049400(CA)	sp|Q9FUY2|LEUNG_ARATH	Transcriptional corepressor LEUNIG OS=Arabidopsis thaliana GN=LUG PE=1 SV=2	AT2G32700.6	| Symbols: LUH | LEUNIG_homolog | chr2:13867235-13871844 FORWARD LENGTH=785	LOC_Os02g56880.1	protein|transcriptional corepressor LEUNIG, putative, expressed	IMGA|Medtr1g011610.1	Transcriptional corepressor LEUNIG chr1 2436342-2425793 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009790|embryo development GO:0009827|plant-type cell wall modification GO:0009908|flower development GO:0045892|negative regulation of transcription, DNA-dependent GO:0048358|mucilage pectin biosynthetic process	GO:0003713|transcription coactivator activity	GO:0005634|nucleus
pt2_01510	A	A2S	Potri.001G049300	Potri.001G049300(AS) Potri.003G178700(DS)	POPTR_0001s14590	sp|Q8LBL5|PRT1_ARATH	E3 ubiquitin-protein ligase PRT1 OS=Arabidopsis thaliana GN=PRT1 PE=2 SV=2	AT3G24800.1	| Symbols: PRT1 | proteolysis 1 | chr3:9055653-9057795 FORWARD LENGTH=410	LOC_Os02g40810.1	protein|Zinc finger, ZZ type domain containing protein, expressed	NA	NA	GO:0006511|ubiquitin-dependent protein catabolic process	GO:0004842|ubiquitin-protein ligase activity GO:0008270|zinc ion binding	GO:0000151|ubiquitin ligase complex GO:0005737|cytoplasm
pt2_01511	A	A2S	Potri.001G049200	Potri.001G049200(AS) Potri.001G049100(AS)	POPTR_0001s14600	sp|A8CDT3|LUPS_BRUGY	Lupeol synthase OS=Bruguiera gymnorhiza GN=LUS PE=1 SV=1	AT1G78950.1	| Symbols: | Terpenoid cyclases family protein | chr1:29684558-29688673 REVERSE LENGTH=759	LOC_Os02g04710.1	protein|cycloartenol synthase, putative, expressed	IMGA|Medtr5g008810.1	Cycloartenol synthase chr5 1706879-1695440 E EGN_Mt100125 20111014	GO:0016126|sterol biosynthetic process GO:0019745|pentacyclic triterpenoid biosynthetic process	GO:0003824|catalytic activity GO:0016866|intramolecular transferase activity GO:0042300|beta-amyrin synthase activity GO:0090438|camelliol C synthase activity	GO:0005634|nucleus
pt2_01512	A	A1S	Potri.001G049200	Potri.001G049200(AS)	POPTR_0001s14610	sp|A8CDT3|LUPS_BRUGY	Lupeol synthase OS=Bruguiera gymnorhiza GN=LUS PE=1 SV=1	AT1G78950.1	| Symbols: | Terpenoid cyclases family protein | chr1:29684558-29688673 REVERSE LENGTH=759	LOC_Os02g04710.1	protein|cycloartenol synthase, putative, expressed	IMGA|Medtr5g008810.1	Cycloartenol synthase chr5 1706879-1695440 E EGN_Mt100125 20111014	GO:0016126|sterol biosynthetic process GO:0019745|pentacyclic triterpenoid biosynthetic process	GO:0003824|catalytic activity GO:0016866|intramolecular transferase activity GO:0042300|beta-amyrin synthase activity GO:0090438|camelliol C synthase activity	GO:0005634|nucleus
pt2_01513	A	A1S	Potri.001G049200	Potri.001G049200(AS)	POPTR_0001s14610	sp|A8CDT3|LUPS_BRUGY	Lupeol synthase OS=Bruguiera gymnorhiza GN=LUS PE=1 SV=1	AT1G78950.1	| Symbols: | Terpenoid cyclases family protein | chr1:29684558-29688673 REVERSE LENGTH=759	LOC_Os02g04710.1	protein|cycloartenol synthase, putative, expressed	IMGA|Medtr5g008810.1	Cycloartenol synthase chr5 1706879-1695440 E EGN_Mt100125 20111014	GO:0016126|sterol biosynthetic process GO:0019745|pentacyclic triterpenoid biosynthetic process	GO:0003824|catalytic activity GO:0016866|intramolecular transferase activity GO:0042300|beta-amyrin synthase activity GO:0090438|camelliol C synthase activity	GO:0005634|nucleus
pt2_01514	A	A2S	Potri.001G049200	Potri.001G049200(AS) Potri.001G049100(AS)	POPTR_0001s14610	sp|A8CDT3|LUPS_BRUGY	Lupeol synthase OS=Bruguiera gymnorhiza GN=LUS PE=1 SV=1	AT1G78950.1	| Symbols: | Terpenoid cyclases family protein | chr1:29684558-29688673 REVERSE LENGTH=759	LOC_Os02g04710.1	protein|cycloartenol synthase, putative, expressed	IMGA|Medtr5g008810.1	Cycloartenol synthase chr5 1706879-1695440 E EGN_Mt100125 20111014	GO:0016126|sterol biosynthetic process GO:0019745|pentacyclic triterpenoid biosynthetic process	GO:0003824|catalytic activity GO:0016866|intramolecular transferase activity GO:0042300|beta-amyrin synthase activity GO:0090438|camelliol C synthase activity	GO:0005634|nucleus
pt2_01515	A	A1S	Potri.001G049000	Potri.001G049000(AS)	POPTR_0001s14620	sp|Q76CU2|PDR1_TOBAC	Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum GN=PDR1 PE=2 SV=1	AT1G15520.1	| Symbols: PDR12, ATPDR12, ABCG40, ATABCG40 | pleiotropic drug resistance 12 | chr1:5331993-5338175 REVERSE LENGTH=1423	LOC_Os02g11760.1	protein|pleiotropic drug resistance protein, putative, expressed	IMGA|Medtr5g070320.1	Pleiotropic drug resistance ABC transporter family protein chr5 28781263-28793818 H EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0002831|regulation of response to biotic stimulus GO:0006612|protein targeting to membrane GO:0006855|drug transmembrane transport GO:0007165|signal transduction GO:0009414|response to water deprivation GO:0009595|detection of biotic stimulus GO:0009607|response to biotic stimulus GO:0009697|salicylic acid biosynthetic process GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009751|response to salicylic acid stimulus GO:0009753|response to jasmonic acid stimulus GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010193|response to ozone GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0015692|lead ion transport GO:0031348|negative regulation of defense response GO:0042538|hyperosmotic salinity response GO:0042742|defense response to bacterium GO:0043069|negative regulation of programmed cell death GO:0043900|regulation of multi-organism process GO:0046865|terpenoid transport GO:0050832|defense response to fungus GO:0080168|abscisic acid transport	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0005886|plasma membrane
pt2_01516	A	A1S	Potri.001G048900	Potri.001G048900(AS)	POPTR_0001s14630	sp|Q76CU2|PDR1_TOBAC	Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum GN=PDR1 PE=2 SV=1	AT1G15520.1	| Symbols: PDR12, ATPDR12, ABCG40, ATABCG40 | pleiotropic drug resistance 12 | chr1:5331993-5338175 REVERSE LENGTH=1423	LOC_Os02g11760.1	protein|pleiotropic drug resistance protein, putative, expressed	IMGA|Medtr5g070320.1	Pleiotropic drug resistance ABC transporter family protein chr5 28781263-28793818 H EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0002831|regulation of response to biotic stimulus GO:0006612|protein targeting to membrane GO:0006855|drug transmembrane transport GO:0007165|signal transduction GO:0009414|response to water deprivation GO:0009595|detection of biotic stimulus GO:0009607|response to biotic stimulus GO:0009697|salicylic acid biosynthetic process GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009751|response to salicylic acid stimulus GO:0009753|response to jasmonic acid stimulus GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010193|response to ozone GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0015692|lead ion transport GO:0031348|negative regulation of defense response GO:0042538|hyperosmotic salinity response GO:0042742|defense response to bacterium GO:0043069|negative regulation of programmed cell death GO:0043900|regulation of multi-organism process GO:0046865|terpenoid transport GO:0050832|defense response to fungus GO:0080168|abscisic acid transport	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0005886|plasma membrane
pt2_01517	R	R	NA	NA	POPTR_0001s14640	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01518	A	A2S	Potri.001G048800	Potri.001G048800(AS) Potri.001G048700(BS)	POPTR_0001s14650	sp|Q76CU2|PDR1_TOBAC	Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum GN=PDR1 PE=2 SV=1	AT1G15520.1	| Symbols: PDR12, ATPDR12, ABCG40, ATABCG40 | pleiotropic drug resistance 12 | chr1:5331993-5338175 REVERSE LENGTH=1423	LOC_Os02g11760.1	protein|pleiotropic drug resistance protein, putative, expressed	IMGA|Medtr5g070320.1	Pleiotropic drug resistance ABC transporter family protein chr5 28781263-28793818 H EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0002831|regulation of response to biotic stimulus GO:0006612|protein targeting to membrane GO:0006855|drug transmembrane transport GO:0007165|signal transduction GO:0009414|response to water deprivation GO:0009595|detection of biotic stimulus GO:0009607|response to biotic stimulus GO:0009697|salicylic acid biosynthetic process GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009751|response to salicylic acid stimulus GO:0009753|response to jasmonic acid stimulus GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010193|response to ozone GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0015692|lead ion transport GO:0031348|negative regulation of defense response GO:0042538|hyperosmotic salinity response GO:0042742|defense response to bacterium GO:0043069|negative regulation of programmed cell death GO:0043900|regulation of multi-organism process GO:0046865|terpenoid transport GO:0050832|defense response to fungus GO:0080168|abscisic acid transport	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0005886|plasma membrane
pt2_01519	C	C1S	Potri.004G177400	Potri.004G177400(CS)	sp|P80093|PDS_CAPAN	15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Capsicum annuum GN=PDS PE=1 SV=1	AT4G14210.1	| Symbols: PDS3, PDS, PDE226 | phytoene desaturase 3 | chr4:8190426-8194769 REVERSE LENGTH=566	LOC_Os04g47290.2	protein|amine oxidase, putative, expressed	NA	NA	GO:0010155|regulation of proton transport GO:0016117|carotenoid biosynthetic process GO:0016120|carotene biosynthetic process GO:0046777|protein autophosphorylation GO:0055114|oxidation-reduction process	GO:0016166|phytoene dehydrogenase activity GO:0016491|oxidoreductase activity GO:0016705|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid GO:0009536|plastid GO:0009941|chloroplast envelope
pt2_01520	A	A3S	Potri.001G048700	Potri.001G048700(AS) Potri.001G048800(DS) Potri.001G049000(DS)	POPTR_0001s14660	sp|Q76CU2|PDR1_TOBAC	Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum GN=PDR1 PE=2 SV=1	AT1G15520.1	| Symbols: PDR12, ATPDR12, ABCG40, ATABCG40 | pleiotropic drug resistance 12 | chr1:5331993-5338175 REVERSE LENGTH=1423	LOC_Os02g11760.1	protein|pleiotropic drug resistance protein, putative, expressed	IMGA|Medtr5g070320.1	Pleiotropic drug resistance ABC transporter family protein chr5 28781263-28793818 H EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0002831|regulation of response to biotic stimulus GO:0006612|protein targeting to membrane GO:0006855|drug transmembrane transport GO:0007165|signal transduction GO:0009414|response to water deprivation GO:0009595|detection of biotic stimulus GO:0009607|response to biotic stimulus GO:0009697|salicylic acid biosynthetic process GO:0009723|response to ethylene stimulus GO:0009733|response to auxin stimulus GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009751|response to salicylic acid stimulus GO:0009753|response to jasmonic acid stimulus GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010193|response to ozone GO:0010200|response to chitin GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0015692|lead ion transport GO:0031348|negative regulation of defense response GO:0042538|hyperosmotic salinity response GO:0042742|defense response to bacterium GO:0043069|negative regulation of programmed cell death GO:0043900|regulation of multi-organism process GO:0046865|terpenoid transport GO:0050832|defense response to fungus GO:0080168|abscisic acid transport	GO:0000166|nucleotide binding GO:0005524|ATP binding GO:0016887|ATPase activity GO:0017111|nucleoside-triphosphatase activity GO:0042626|ATPase activity, coupled to transmembrane movement of substances	GO:0005886|plasma membrane
pt2_01521	G	G1	NA	NA	POPTR_0001s14670	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01522	A	A2S	Potri.001G048500	Potri.001G048500(AS) Potri.003G179500(DS)	POPTR_0001s14680	sp|Q0V7T5|Y1864_ARATH	Probable receptor-like protein kinase At1g80640 OS=Arabidopsis thaliana GN=At1g80640 PE=2 SV=1	AT2G25220.1	| Symbols: | Protein kinase superfamily protein | chr2:10742918-10745540 REVERSE LENGTH=414	LOC_Os02g08530.1	protein|protein kinase family protein, putative, expressed	IMGA|Medtr5g092120.1	Serine/threonine protein kinase chr5 39187993-39185584 F EGN_Mt100125 20111014	GO:0006468|protein phosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005886|plasma membrane
pt2_01523	A	A1S	Potri.001G048400	Potri.001G048400(AS)	POPTR_0001s14690	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01524	A	A3S	Potri.001G048300	Potri.001G048300(AS) Potri.005G189200(DS) Potri.003G179800(DS)	POPTR_0001s14700	sp|Q42556|PMA9_ARATH	ATPase 9, plasma membrane-type OS=Arabidopsis thaliana GN=AHA9 PE=2 SV=2	AT1G80660.1	| Symbols: AHA9, HA9 | H(+)-ATPase 9 | chr1:30316227-30319948 REVERSE LENGTH=954	LOC_Os04g56160.1	protein|plasma membrane ATPase, putative, expressed	IMGA|contig_93597_1.1	H-ATPase contig_93597 548-3166 H PREDN 20111014	GO:0006200|ATP catabolic process GO:0006754|ATP biosynthetic process GO:0006812|cation transport GO:0008152|metabolic process GO:0015992|proton transport	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0005524|ATP binding GO:0008553|hydrogen-exporting ATPase activity, phosphorylative mechanism GO:0015662|ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism GO:0016887|ATPase activity GO:0046872|metal ion binding	GO:0005774|vacuolar membrane GO:0005886|plasma membrane GO:0016020|membrane GO:0016021|integral to membrane
pt2_01525	G	G7	NA	NA	POPTR_0001s14710	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01526	A	A2S	Potri.001G048200	Potri.001G048200(AS) Potri.003G179900(DS)	POPTR_0001s14720	sp|Q94AW5|ERF03_ARATH	Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana GN=ERF003 PE=2 SV=1	AT5G25190.1	| Symbols: | Integrase-type DNA-binding superfamily protein | chr5:8707007-8707655 REVERSE LENGTH=181	LOC_Os02g55380.1	protein|AP2 domain containing protein, expressed	IMGA|Medtr5g062700.1	Ethylene-responsive transcription factor RAP2-4 chr5 25273709-25276211 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009740|gibberellic acid mediated signaling pathway GO:0009873|ethylene mediated signaling pathway GO:0010162|seed dormancy process	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_01527	A	A1S	Potri.001G048100	Potri.001G048100(AS)	POPTR_0001s14730	sp|Q38942|RAE1L_ARATH	Rae1-like protein At1g80670 OS=Arabidopsis thaliana GN=At1g80670 PE=2 SV=2	AT1G80670.1	| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr1:30320809-30323543 REVERSE LENGTH=349	LOC_Os08g07960.1	protein|mitotic checkpoint protein, putative, expressed	IMGA|Medtr5g005120.1	Mitotic checkpoint protein BUB3 chr5 55763-58997 F EGN_Mt100125 20111014	NA	GO:0000166|nucleotide binding GO:0005515|protein binding	GO:0005635|nuclear envelope GO:0005737|cytoplasm GO:0005829|cytosol GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_01528	A	A1S	Potri.001G048100	Potri.001G048100(AS)	POPTR_0001s14730	sp|Q38942|RAE1L_ARATH	Rae1-like protein At1g80670 OS=Arabidopsis thaliana GN=At1g80670 PE=2 SV=2	AT1G80670.1	| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr1:30320809-30323543 REVERSE LENGTH=349	LOC_Os08g07960.1	protein|mitotic checkpoint protein, putative, expressed	IMGA|Medtr5g005120.1	Mitotic checkpoint protein BUB3 chr5 55763-58997 F EGN_Mt100125 20111014	NA	GO:0000166|nucleotide binding GO:0005515|protein binding	GO:0005635|nuclear envelope GO:0005737|cytoplasm GO:0005829|cytosol GO:0080008|CUL4-RING ubiquitin ligase complex
pt2_01529	A	A1S	Potri.001G047900	Potri.001G047900(AS)	POPTR_0001s14740	sp|Q92564|DCNL4_HUMAN	DCN1-like protein 4 OS=Homo sapiens GN=DCUN1D4 PE=1 SV=2	AT1G15860.2	| Symbols: | Domain of unknown function (DUF298) | chr1:5455055-5456741 FORWARD LENGTH=227	LOC_Os08g34070.2	protein|DCN1, putative, expressed	NA	NA	GO:0008150|biological_process	NA	GO:0005634|nucleus
pt2_01530	A	A1S	Potri.001G047900	Potri.001G047900(AS)	POPTR_0001s14740	sp|Q92564|DCNL4_HUMAN	DCN1-like protein 4 OS=Homo sapiens GN=DCUN1D4 PE=1 SV=2	AT1G15860.2	| Symbols: | Domain of unknown function (DUF298) | chr1:5455055-5456741 FORWARD LENGTH=227	LOC_Os08g34070.2	protein|DCN1, putative, expressed	NA	NA	GO:0008150|biological_process	NA	GO:0005634|nucleus
pt2_01531	A	A1S	Potri.001G047800	Potri.001G047800(AS)	POPTR_0001s14750	sp|Q93VG8|PPDEX_ARATH	DeSI-like protein At4g17486 OS=Arabidopsis thaliana GN=At4g17486 PE=2 SV=1	AT1G80690.1	| Symbols: | PPPDE putative thiol peptidase family protein | chr1:30329283-30330524 REVERSE LENGTH=227	LOC_Os03g10200.1	protein|ethylene-responsive element-binding protein, putative, expressed	IMGA|Medtr5g013040.1	hypothetical protein chr5 3837813-3834899 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005737|cytoplasm
pt2_01532	A	A2S	Potri.001G047700	Potri.001G047700(AS) Potri.003G180500(DS)	POPTR_0001s14760	NA	NA	AT1G80980.1	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80700.1); Has 477 Blast hits to 341 proteins in 85 species: Archae - 2; Bacteria - 44; Metazoa - 78; Fungi - 37; Plants - 42; Viruses - 0; Other Eukaryotes - 274 (source: NCBI BLink). | chr1:30422184-30423440 REVERSE LENGTH=214	LOC_Os08g17610.1	protein|expressed protein	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion
pt2_01533	A	A1S	Potri.001G047600	Potri.001G047600(AS)	POPTR_0001s14770	sp|Q8W487|YB95_ARATH	Uncharacterized protein At2g39795, mitochondrial OS=Arabidopsis thaliana GN=At2g39795 PE=1 SV=1	AT1G15870.1	| Symbols: | Mitochondrial glycoprotein family protein | chr1:5457153-5458245 FORWARD LENGTH=242	LOC_Os08g34130.1	protein|mitochondrial glycoprotein, putative, expressed	IMGA|Medtr5g080880.1	hypothetical protein chr5 33627725-33632668 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0005759|mitochondrial matrix
pt2_01534	A	A2S	Potri.001G047500	Potri.001G047500(AS) Potri.003G180600(DS)	POPTR_0001s14780	sp|Q39262|ZFP3_ARATH	Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1	AT5G10970.1	| Symbols: | C2H2 and C2HC zinc fingers superfamily protein | chr5:3469268-3470086 FORWARD LENGTH=272	LOC_Os03g13600.2	protein|ZOS3-07 - C2H2 zinc finger protein, expressed	IMGA|Medtr5g077370.1	Zinc finger protein chr5 32033659-32032815 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003676|nucleic acid binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding	GO:0005622|intracellular GO:0005634|nucleus
pt2_01535	A	A2S	Potri.001G047400	Potri.001G047400(AS) Potri.003G180700(BS)	POPTR_0001s14790	sp|Q9SAI5|RL71_ARATH	60S ribosomal protein L7-1 OS=Arabidopsis thaliana GN=RPL7A PE=2 SV=1	AT1G80750.1	| Symbols: | Ribosomal protein L30/L7 family protein | chr1:30349052-30350434 FORWARD LENGTH=247	LOC_Os08g42920.1	protein|60S ribosomal protein L7, putative, expressed	IMGA|contig_48786_1.1	60S ribosomal protein L7 contig_48786 1134-1768 F PREDN 20111014	GO:0001510|RNA methylation GO:0006412|translation	GO:0003735|structural constituent of ribosome	GO:0005730|nucleolus GO:0005737|cytoplasm GO:0005829|cytosol GO:0005840|ribosome GO:0015934|large ribosomal subunit GO:0022625|cytosolic large ribosomal subunit
pt2_01536	R	R	NA	NA	POPTR_0001s14800	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01537	A	A1S	Potri.001G047200	Potri.001G047200(AS)	POPTR_0001s14810	sp|Q9SGQ6|PP126_ARATH	Pentatricopeptide repeat-containing protein At1g76280 OS=Arabidopsis thaliana GN=At1g76280 PE=2 SV=2	AT1G76280.3	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:28617948-28622581 REVERSE LENGTH=801	LOC_Os09g29790.1	protein|PPR repeat domain containing protein, putative, expressed	IMGA|Medtr5g031740.1	Pentatricopeptide repeat-containing protein chr5 13189186-13191870 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_01538	A	A1S	Potri.001G047100	Potri.001G047100(AS)	POPTR_0001s14820	sp|Q9LMP7|GOS11_ARATH	Golgi SNAP receptor complex member 1-1 OS=Arabidopsis thaliana GN=GOS11 PE=2 SV=1	AT1G15880.1	| Symbols: GOS11, atgos11 | golgi snare 11 | chr1:5458718-5460089 REVERSE LENGTH=223	LOC_Os08g34140.1	protein|vesicle transport v-SNARE protein, putative, expressed	NA	NA	GO:0006869|lipid transport GO:0006888|ER to Golgi vesicle-mediated transport GO:0006891|intra-Golgi vesicle-mediated transport GO:0006944|cellular membrane fusion GO:0010351|lithium ion transport GO:0016558|protein import into peroxisome matrix GO:0048193|Golgi vesicle transport	GO:0000149|SNARE binding	GO:0005622|intracellular GO:0005794|Golgi apparatus GO:0016021|integral to membrane
pt2_01539	A	A1S	Potri.001G047000	Potri.001G047000(AS)	POPTR_0001s14830	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01540	A	A1S	Potri.001G046900	Potri.001G046900(AS)	POPTR_0001s14840	NA	NA	AT1G15900.1	| Symbols: | unknown protein; Has 19 Blast hits to 19 proteins in 10 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr1:5464356-5464697 FORWARD LENGTH=113	NA	NA	NA	NA	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_01541	B	B2S	Potri.001G046800	Potri.001G046800(BS) Potri.001G046900(BA)	POPTR_0001s14850	sp|Q9SAI4|NIP61_ARATH	Aquaporin NIP6-1 OS=Arabidopsis thaliana GN=NIP6-1 PE=1 SV=1	AT1G80760.1	| Symbols: NIP6;1, NIP6, NLM7 | NOD26-like intrinsic protein 6;1 | chr1:30350640-30352015 REVERSE LENGTH=305	LOC_Os10g36924.1	protein|aquaporin protein, putative, expressed	IMGA|Medtr1g097840.1	Aquaporin NIP3-1 chr1 27981067-27985566 E EGN_Mt100125 20111014	GO:0006810|transport GO:0010264|myo-inositol hexakisphosphate biosynthetic process GO:0046713|borate transport GO:0080029|cellular response to boron-containing substance levels	GO:0005215|transporter activity GO:0015168|glycerol transmembrane transporter activity GO:0015204|urea transmembrane transporter activity GO:0015250|water channel activity GO:0046715|borate transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_01542	A	A1S	Potri.001G046700	Potri.001G046700(AS)	POPTR_0001s14860	sp|Q9SKZ2|CAF1G_ARATH	Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana GN=CAF1-7 PE=2 SV=2	AT2G32070.1	| Symbols: | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr2:13640829-13641656 REVERSE LENGTH=275	LOC_Os02g55300.1	protein|CAF1 family ribonuclease containing protein, putative, expressed	IMGA|Medtr5g043120.1	CCR4-associated factor chr5 18534846-18533998 H EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0009451|RNA modification	GO:0003676|nucleic acid binding GO:0004540|ribonuclease activity	GO:0005634|nucleus
pt2_01543	A	A1S	Potri.001G046600	Potri.001G046600(AS)	POPTR_0001s14870	sp|Q9XHS0|RS12_HORVU	40S ribosomal protein S12 OS=Hordeum vulgare GN=RPS12 PE=2 SV=1	AT2G32060.2	| Symbols: | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | chr2:13639228-13640104 REVERSE LENGTH=144	LOC_Os07g05580.1	protein|ribosomal protein L7Ae, putative, expressed	IMGA|Medtr5g012890.1	40S ribosomal protein S12 chr5 3720346-3721879 F EGN_Mt100125 20111014	GO:0001510|RNA methylation GO:0006412|translation GO:0009853|photorespiration	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005634|nucleus GO:0005840|ribosome GO:0022626|cytosolic ribosome GO:0022627|cytosolic small ribosomal subunit
pt2_01544	A	A1S	Potri.001G046500	Potri.001G046500(AS)	POPTR_0001s14880	NA	NA	AT4G31880.2	| Symbols: | LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT1G15940.1). | chr4:15419435-15423939 REVERSE LENGTH=872	LOC_Os04g42320.1	protein|AT hook motif family protein, expressed	NA	NA	GO:0006312|mitotic recombination GO:0007062|sister chromatid cohesion GO:0009560|embryo sac egg cell differentiation GO:0009630|gravitropism GO:0031048|chromatin silencing by small RNA GO:0045132|meiotic chromosome segregation	NA	GO:0005634|nucleus GO:0005829|cytosol GO:0009507|chloroplast
pt2_01545	A	A5S	Potri.001G046400	Potri.001G046400(AS) Potri.001G046100(BS) Potri.003G181400(DS) Potri.001G045000(DS) Potri.001G045100(DS)	POPTR_0001s14890	sp|Q9S9N9|CCR1_ARATH	Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1	AT1G15950.1	| Symbols: CCR1, IRX4, ATCCR1 | cinnamoyl coa reductase 1 | chr1:5478855-5481915 FORWARD LENGTH=344	LOC_Os08g34280.1	protein|cinnamoyl-CoA reductase, putative, expressed	IMGA|Medtr5g072620.1	Dihydroflavonol 4-reductase-like protein chr5 29922618-29926018 E EGN_Mt100125 20111014	GO:0006623|protein targeting to vacuole GO:0009409|response to cold GO:0009809|lignin biosynthetic process GO:0010200|response to chitin GO:0044237|cellular metabolic process GO:0050832|defense response to fungus	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0016621|cinnamoyl-CoA reductase activity GO:0050662|coenzyme binding	GO:0005575|cellular_component GO:0005737|cytoplasm GO:0005829|cytosol
pt2_01546	C	C1S	Potri.001G046300	Potri.001G046300(CS)	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01547	A	A4S	Potri.001G046100	Potri.001G046100(AS) Potri.001G046400(BS) Potri.001G045000(DS) Potri.001G045100(DS)	POPTR_0001s14910	sp|Q9S9N9|CCR1_ARATH	Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1	AT1G15950.1	| Symbols: CCR1, IRX4, ATCCR1 | cinnamoyl coa reductase 1 | chr1:5478855-5481915 FORWARD LENGTH=344	LOC_Os08g34280.1	protein|cinnamoyl-CoA reductase, putative, expressed	IMGA|Medtr5g072620.1	Dihydroflavonol 4-reductase-like protein chr5 29922618-29926018 E EGN_Mt100125 20111014	GO:0006623|protein targeting to vacuole GO:0009409|response to cold GO:0009809|lignin biosynthetic process GO:0044237|cellular metabolic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0016621|cinnamoyl-CoA reductase activity GO:0050662|coenzyme binding	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_01548	A	A1S	Potri.001G046000	Potri.001G046000(AS)	POPTR_0001s14920	sp|Q9SD53|Y3720_ARATH	UPF0481 protein At3g47200 OS=Arabidopsis thaliana GN=At3g47200 PE=1 SV=1	AT3G50160.1	| Symbols: | Plant protein of unknown function (DUF247) | chr3:18598826-18600903 REVERSE LENGTH=503	LOC_Os01g21650.1	protein|plant protein of unknown function domain containing protein, expressed	IMGA|Medtr5g016570.1	hypothetical protein chr5 5698968-5697224 E EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005886|plasma membrane
pt2_01549	B	B1S	Potri.001G045500	Potri.001G045500(BS)	POPTR_0001s14930	sp|Q9S9N9|CCR1_ARATH	Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1	AT1G15950.1	| Symbols: CCR1, IRX4, ATCCR1 | cinnamoyl coa reductase 1 | chr1:5478855-5481915 FORWARD LENGTH=344	LOC_Os08g34280.1	protein|cinnamoyl-CoA reductase, putative, expressed	IMGA|Medtr5g072620.1	Dihydroflavonol 4-reductase-like protein chr5 29922618-29926018 E EGN_Mt100125 20111014	GO:0006623|protein targeting to vacuole GO:0009409|response to cold GO:0009809|lignin biosynthetic process GO:0044237|cellular metabolic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0016621|cinnamoyl-CoA reductase activity GO:0050662|coenzyme binding	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_01550	C	C4S	Potri.001G045800	Potri.001G045800(CS) Potri.001G045700(CS) Potri.001G045600(CS) Potri.001G045800(CS)	sp|Q9S9N9|CCR1_ARATH	Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1	AT1G15950.1	| Symbols: CCR1, IRX4, ATCCR1 | cinnamoyl coa reductase 1 | chr1:5478855-5481915 FORWARD LENGTH=344	LOC_Os09g25150.2	protein|cinnamoyl-CoA reductase, putative, expressed	IMGA|Medtr5g072620.1	Dihydroflavonol 4-reductase-like protein chr5 29922618-29926018 E EGN_Mt100125 20111014	GO:0006623|protein targeting to vacuole GO:0009409|response to cold GO:0009809|lignin biosynthetic process GO:0044237|cellular metabolic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0016621|cinnamoyl-CoA reductase activity GO:0050662|coenzyme binding	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_01551	C	C1S	Potri.001G045700	Potri.001G045700(CS)	sp|Q9S9N9|CCR1_ARATH	Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1	AT1G15950.1	| Symbols: CCR1, IRX4, ATCCR1 | cinnamoyl coa reductase 1 | chr1:5478855-5481915 FORWARD LENGTH=344	LOC_Os08g34280.1	protein|cinnamoyl-CoA reductase, putative, expressed	IMGA|Medtr5g072620.1	Dihydroflavonol 4-reductase-like protein chr5 29922618-29926018 E EGN_Mt100125 20111014	GO:0006623|protein targeting to vacuole GO:0009409|response to cold GO:0009809|lignin biosynthetic process GO:0044237|cellular metabolic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0016621|cinnamoyl-CoA reductase activity GO:0050662|coenzyme binding	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_01552	A	A1S	Potri.001G045500	Potri.001G045500(AS)	POPTR_0001s14970	sp|Q9S9N9|CCR1_ARATH	Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1	AT1G15950.1	| Symbols: CCR1, IRX4, ATCCR1 | cinnamoyl coa reductase 1 | chr1:5478855-5481915 FORWARD LENGTH=344	LOC_Os08g34280.1	protein|cinnamoyl-CoA reductase, putative, expressed	IMGA|Medtr5g072620.1	Dihydroflavonol 4-reductase-like protein chr5 29922618-29926018 E EGN_Mt100125 20111014	GO:0006623|protein targeting to vacuole GO:0009409|response to cold GO:0009809|lignin biosynthetic process GO:0044237|cellular metabolic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0016621|cinnamoyl-CoA reductase activity GO:0050662|coenzyme binding	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_01553	A	A1S	Potri.001G045400	Potri.001G045400(AS)	POPTR_0001s14980	sp|Q9SAH9|CCR2_ARATH	Cinnamoyl-CoA reductase 2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1	AT1G80820.1	| Symbols: CCR2, ATCCR2 | cinnamoyl coa reductase | chr1:30370646-30372460 FORWARD LENGTH=332	LOC_Os09g25150.3	protein|cinnamoyl-CoA reductase, putative, expressed	IMGA|Medtr5g072620.1	Dihydroflavonol 4-reductase-like protein chr5 29922618-29926018 E EGN_Mt100125 20111014	GO:0006623|protein targeting to vacuole GO:0009409|response to cold GO:0009809|lignin biosynthetic process GO:0044237|cellular metabolic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0016621|cinnamoyl-CoA reductase activity GO:0050662|coenzyme binding	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_01554	A	A1S	Potri.001G045300	Potri.001G045300(AS)	POPTR_0001s14990	sp|Q9S9N9|CCR1_ARATH	Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1	AT1G15950.1	| Symbols: CCR1, IRX4, ATCCR1 | cinnamoyl coa reductase 1 | chr1:5478855-5481915 FORWARD LENGTH=344	LOC_Os09g25150.2	protein|cinnamoyl-CoA reductase, putative, expressed	NA	NA	GO:0006623|protein targeting to vacuole GO:0009409|response to cold GO:0009809|lignin biosynthetic process GO:0044237|cellular metabolic process	GO:0000166|nucleotide binding GO:0003824|catalytic activity GO:0016621|cinnamoyl-CoA reductase activity GO:0050662|coenzyme binding	GO:0005737|cytoplasm GO:0005829|cytosol
pt2_01555	B	B1S	Potri.T134000	Potri.T134000(BS)	POPTR_0001s15000	sp|Q9M7K4|POT5_ARATH	Potassium transporter 5 OS=Arabidopsis thaliana GN=POT5 PE=1 SV=1	AT4G13420.1	| Symbols: HAK5, ATHAK5 | high affinity K+ transporter 5 | chr4:7797038-7802174 REVERSE LENGTH=785	LOC_Os01g70490.1	protein|potassium transporter, putative, expressed	IMGA|Medtr5g070670.1	Potassium transporter chr5 28933662-28942483 E EGN_Mt100125 20111014	GO:0006813|potassium ion transport GO:0071805|potassium ion transmembrane transport	GO:0009674|potassium:sodium symporter activity GO:0015079|potassium ion transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_01556	C	C2S	Potri.001G045200	Potri.001G045200(CS) Potri.T134000(CS)	sp|Q9M7K4|POT5_ARATH	Potassium transporter 5 OS=Arabidopsis thaliana GN=POT5 PE=1 SV=1	AT4G13420.1	| Symbols: HAK5, ATHAK5 | high affinity K+ transporter 5 | chr4:7797038-7802174 REVERSE LENGTH=785	LOC_Os01g70490.1	protein|potassium transporter, putative, expressed	IMGA|Medtr5g070670.1	Potassium transporter chr5 28933662-28942483 E EGN_Mt100125 20111014	GO:0006813|potassium ion transport GO:0071805|potassium ion transmembrane transport	GO:0009674|potassium:sodium symporter activity GO:0015079|potassium ion transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_01557	R	R	NA	NA	POPTR_0001s15020	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01558	R	R	NA	NA	POPTR_0001s15030	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01559	A	A1S	Potri.001G150400	Potri.001G150400(AS)	POPTR_0001s15040	sp|Q9LKI5|XPF_ARATH	DNA repair endonuclease UVH1 OS=Arabidopsis thaliana GN=UVH1 PE=1 SV=2	AT5G41150.1	| Symbols: UVH1, ATRAD1, RAD1 | Restriction endonuclease, type II-like superfamily protein | chr5:16473044-16476919 REVERSE LENGTH=956	LOC_Os03g01100.1	protein|endonuclease, putative, expressed	IMGA|Medtr5g013480.1	DNA repair endonuclease UVH1 chr5 4027631-4021517 E EGN_Mt100125 20111014	GO:0000710|meiotic mismatch repair GO:0000712|resolution of meiotic recombination intermediates GO:0000724|double-strand break repair via homologous recombination GO:0006259|DNA metabolic process GO:0006281|DNA repair GO:0006289|nucleotide-excision repair GO:0006296|nucleotide-excision repair, DNA incision, 5'-to lesion GO:0006979|response to oxidative stress GO:0009314|response to radiation	GO:0000014|single-stranded DNA specific endodeoxyribonuclease activity GO:0003677|DNA binding GO:0003697|single-stranded DNA binding GO:0004518|nuclease activity	GO:0000110|nucleotide-excision repair factor 1 complex GO:0005634|nucleus
pt2_01560	A	A1S	Potri.001G150400	Potri.001G150400(AS)	POPTR_0001s15040	sp|Q9LKI5|XPF_ARATH	DNA repair endonuclease UVH1 OS=Arabidopsis thaliana GN=UVH1 PE=1 SV=2	AT5G41150.1	| Symbols: UVH1, ATRAD1, RAD1 | Restriction endonuclease, type II-like superfamily protein | chr5:16473044-16476919 REVERSE LENGTH=956	LOC_Os03g01100.1	protein|endonuclease, putative, expressed	IMGA|Medtr5g013480.1	DNA repair endonuclease UVH1 chr5 4027631-4021517 E EGN_Mt100125 20111014	GO:0000710|meiotic mismatch repair GO:0000712|resolution of meiotic recombination intermediates GO:0000724|double-strand break repair via homologous recombination GO:0006259|DNA metabolic process GO:0006281|DNA repair GO:0006289|nucleotide-excision repair GO:0006296|nucleotide-excision repair, DNA incision, 5'-to lesion GO:0006979|response to oxidative stress GO:0009314|response to radiation	GO:0000014|single-stranded DNA specific endodeoxyribonuclease activity GO:0003677|DNA binding GO:0003697|single-stranded DNA binding GO:0004518|nuclease activity	GO:0000110|nucleotide-excision repair factor 1 complex GO:0005634|nucleus
pt2_01561	A	A1S	Potri.001G150500	Potri.001G150500(AS)	POPTR_0001s15050	sp|P37216|AROG_SOLLC	Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Solanum lycopersicum PE=2 SV=1	AT4G33510.1	| Symbols: DHS2 | 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase | chr4:16116496-16118549 FORWARD LENGTH=507	LOC_Os03g27230.1	protein|phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplast precursor, putative, expressed	IMGA|Medtr5g064500.1	2-dehydro-3-deoxyphosphoheptonate aldolase (3-deoxy-d-arabino-heptulosonate 7-phosphate synthase) chr5 26109513-26113523 F EGN_Mt100125 20111014	GO:0009073|aromatic amino acid family biosynthetic process GO:0009423|chorismate biosynthetic process	GO:0003849|3-deoxy-7-phosphoheptulonate synthase activity GO:0005515|protein binding	GO:0009507|chloroplast GO:0009534|chloroplast thylakoid
pt2_01562	A	A1S	Potri.001G150600	Potri.001G150600(AS)	POPTR_0001s15060	NA	NA	AT2G44730.1	| Symbols: | Alcohol dehydrogenase transcription factor Myb/SANT-like family protein | chr2:18437447-18438565 REVERSE LENGTH=372	LOC_Os10g41460.1	protein|transcription factor like protein, putative, expressed	IMGA|Medtr5g017500.1	hypothetical protein chr5 6140380-6141354 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_01563	A	A1S	Potri.001G150600	Potri.001G150600(AS)	POPTR_0001s15070	NA	NA	AT2G44730.1	| Symbols: | Alcohol dehydrogenase transcription factor Myb/SANT-like family protein | chr2:18437447-18438565 REVERSE LENGTH=372	LOC_Os10g41460.1	protein|transcription factor like protein, putative, expressed	IMGA|Medtr5g017500.1	hypothetical protein chr5 6140380-6141354 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_01564	A	A1S	Potri.001G150700	Potri.001G150700(AS)	POPTR_0001s15080	sp|Q9LZ20|CAAT6_ARATH	Cationic amino acid transporter 6, chloroplastic OS=Arabidopsis thaliana GN=CAT6 PE=2 SV=1	AT5G04770.1	| Symbols: ATCAT6, CAT6 | cationic amino acid transporter 6 | chr5:1379118-1382304 FORWARD LENGTH=583	LOC_Os04g45950.2	protein|amino acid permease family protein, putative, expressed	NA	NA	GO:0003333|amino acid transmembrane transport GO:0006810|transport GO:0009624|response to nematode	GO:0015171|amino acid transmembrane transporter activity GO:0015326|cationic amino acid transmembrane transporter activity	GO:0005886|plasma membrane GO:0016020|membrane
pt2_01565	A	A1S	Potri.001G150800	Potri.001G150800(AS)	POPTR_0001s15090	sp|P75713|YLBA_ECOLI	Uncharacterized protein ylbA OS=Escherichia coli (strain K12) GN=ylbA PE=1 SV=1	AT4G17050.1	| Symbols: UGLYAH | ureidoglycine aminohydrolase | chr4:9589662-9592413 FORWARD LENGTH=298	LOC_Os07g31270.1	protein|cupin 2, conserved barrel domain protein, putative, expressed	IMGA|contig_53805_1.1	Cupin 2 conserved barrel domain protein contig_53805 5741-5177 E PREDN 20111014	GO:0000023|maltose metabolic process GO:0000256|allantoin catabolic process GO:0006355|regulation of transcription, DNA-dependent GO:0019252|starch biosynthetic process GO:0043085|positive regulation of catalytic activity	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0071522|ureidoglycine aminohydrolase activity	NA
pt2_01566	C	C1S	Potri.001G150900	Potri.001G150900(CS)	sp|Q13395|TARB1_HUMAN	Probable methyltransferase TARBP1 OS=Homo sapiens GN=TARBP1 PE=1 SV=1	AT4G17610.1	| Symbols: | tRNA/rRNA methyltransferase (SpoU) family protein | chr4:9805652-9814910 REVERSE LENGTH=1850	LOC_Os03g01110.1	protein|RNA methyltransferase, TrmH family protein, putative, expressed	IMGA|contig_11143_1.1	RNA methyltransferase TrmH family protein expressed contig_11143 1443-668 H PREDN 20111014	GO:0006396|RNA processing	GO:0003723|RNA binding GO:0008173|RNA methyltransferase activity	NA
pt2_01567	A	A1S	Potri.001G150900	Potri.001G150900(AS)	POPTR_0001s15110	sp|Q13395|TARB1_HUMAN	Probable methyltransferase TARBP1 OS=Homo sapiens GN=TARBP1 PE=1 SV=1	AT4G17610.1	| Symbols: | tRNA/rRNA methyltransferase (SpoU) family protein | chr4:9805652-9814910 REVERSE LENGTH=1850	LOC_Os03g01110.1	protein|RNA methyltransferase, TrmH family protein, putative, expressed	IMGA|contig_11143_1.1	RNA methyltransferase TrmH family protein expressed contig_11143 1443-668 H PREDN 20111014	GO:0006396|RNA processing	GO:0003723|RNA binding GO:0008173|RNA methyltransferase activity	NA
pt2_01568	A	A1S	Potri.001G151100	Potri.001G151100(AS)	POPTR_0001s15120	sp|O65351|SUBL_ARATH	Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1	AT2G19170.1	| Symbols: SLP3 | subtilisin-like serine protease 3 | chr2:8314154-8317620 REVERSE LENGTH=815	LOC_Os04g45960.1	protein|OsSub42 - Putative Subtilisin homologue, expressed	IMGA|Medtr5g025010.1	Subtilisin-like protease chr5 9863093-9866617 E EGN_Mt100125 20111014	GO:0006508|proteolysis GO:0008152|metabolic process GO:0043086|negative regulation of catalytic activity	GO:0004252|serine-type endopeptidase activity GO:0008236|serine-type peptidase activity GO:0042802|identical protein binding	GO:0005576|extracellular region GO:0005618|cell wall GO:0016020|membrane GO:0048196|plant extracellular matrix
pt2_01569	A	A1S	Potri.001G151200	Potri.001G151200(AS)	POPTR_0001s15130	sp|Q38946|DHE2_ARATH	Glutamate dehydrogenase 2 OS=Arabidopsis thaliana GN=GDH2 PE=1 SV=1	AT5G07440.3	| Symbols: GDH2 | glutamate dehydrogenase 2 | chr5:2356153-2357546 FORWARD LENGTH=309	LOC_Os04g45970.2	protein|glutamate dehydrogenase protein, putative, expressed	IMGA|contig_52746_2.1	Glutamate dehydrogenase contig_52746 6706-3655 F PREDN 20111014	GO:0006520|cellular amino acid metabolic process GO:0006598|polyamine catabolic process GO:0006944|cellular membrane fusion GO:0009651|response to salt stress GO:0009698|phenylpropanoid metabolic process GO:0042398|cellular modified amino acid biosynthetic process GO:0046482|para-aminobenzoic acid metabolic process GO:0046686|response to cadmium ion GO:0048193|Golgi vesicle transport GO:0055114|oxidation-reduction process	GO:0000166|nucleotide binding GO:0004352|glutamate dehydrogenase (NAD+) activity GO:0004353|glutamate dehydrogenase [NAD(P)+] activity GO:0005507|copper ion binding GO:0005524|ATP binding GO:0008270|zinc ion binding GO:0016491|oxidoreductase activity GO:0016639|oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor GO:0050897|cobalt ion binding	GO:0005737|cytoplasm GO:0005739|mitochondrion GO:0005774|vacuolar membrane
pt2_01570	A	A2S	Potri.001G151300	Potri.001G151300(AS) Potri.001G151200(AA)	POPTR_0001s15140	NA	NA	AT4G17600.1	| Symbols: LIL3:1 | Chlorophyll A-B binding family protein | chr4:9803759-9804714 FORWARD LENGTH=262	LOC_Os02g03330.1	protein|expressed protein	NA	NA	GO:0006098|pentose-phosphate shunt GO:0006355|regulation of transcription, DNA-dependent GO:0006364|rRNA processing GO:0006417|regulation of translation GO:0009637|response to blue light GO:0009657|plastid organization GO:0009902|chloroplast relocation GO:0009965|leaf morphogenesis GO:0010027|thylakoid membrane organization GO:0010103|stomatal complex morphogenesis GO:0010114|response to red light GO:0010207|photosystem II assembly GO:0010218|response to far red light GO:0015979|photosynthesis GO:0015995|chlorophyll biosynthetic process GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0030154|cell differentiation GO:0034660|ncRNA metabolic process GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0009507|chloroplast GO:0009535|chloroplast thylakoid membrane
pt2_01571	G	G1	NA	NA	POPTR_0001s15145	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01572	A	A2S	Potri.001G151500	Potri.001G151500(AS) Potri.003G083200(DS)	POPTR_0001s15150	sp|O23547|EXLB1_ARATH	Expansin-like B1 OS=Arabidopsis thaliana GN=EXLB1 PE=2 SV=2	AT4G17030.1	| Symbols: ATEXLB1, EXPR, AT-EXPR, ATEXPR1, ATHEXP BETA 3.1, EXLB1 | expansin-like B1 | chr4:9581817-9583181 REVERSE LENGTH=250	LOC_Os07g31390.1	protein|beta-expansin precursor, putative, expressed	IMGA|Medtr5g013440.1	Expansin-like protein chr5 4008030-4006305 F EGN_Mt100125 20111014	GO:0009826|unidimensional cell growth GO:0009828|plant-type cell wall loosening GO:0019953|sexual reproduction	NA	GO:0005576|extracellular region
pt2_01573	A	A1S	Potri.001G151600	Potri.001G151600(AS)	POPTR_0001s15160	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01574	A	A2S	Potri.001G151700	Potri.001G151700(AS) Potri.003G082800(DS)	POPTR_0001s15170	sp|Q8W4H1|GAT26_ARATH	GATA transcription factor 26 OS=Arabidopsis thaliana GN=GATA26 PE=2 SV=1	AT4G17570.3	| Symbols: GATA26 | GATA transcription factor 26 | chr4:9784329-9786974 REVERSE LENGTH=514	LOC_Os04g46020.2	protein|GATA zinc finger domain containing protein, expressed	IMGA|Medtr5g013370.1	GATA transcription factor chr5 3973364-3977858 E EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion binding GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_01575	A	A1S	Potri.001G151800	Potri.001G151800(AS)	POPTR_0001s15180	sp|Q9LD45|BI1_ARATH	Bax inhibitor 1 OS=Arabidopsis thaliana GN=BI-1 PE=1 SV=1	AT5G47120.1	| Symbols: ATBI-1, BI-1, ATBI1, BI1 | BAX inhibitor 1 | chr5:19136071-19137585 FORWARD LENGTH=247	LOC_Os02g03280.2	protein|transmembrane BAX inhibitor motif-containing protein, putative, expressed	IMGA|Medtr5g013340.1	Bax inhibitor chr5 3955866-3958572 F EGN_Mt100125 20111014	GO:0000038|very long-chain fatty acid metabolic process GO:0000165|MAPK cascade GO:0006612|protein targeting to membrane GO:0006983|ER overload response GO:0006984|ER-nucleus signaling pathway GO:0009409|response to cold GO:0009414|response to water deprivation GO:0009605|response to external stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010363|regulation of plant-type hypersensitive response GO:0030968|endoplasmic reticulum unfolded protein response GO:0031348|negative regulation of defense response GO:0034976|response to endoplasmic reticulum stress GO:0043066|negative regulation of apoptotic process GO:0043069|negative regulation of programmed cell death GO:0050832|defense response to fungus GO:0071216|cellular response to biotic stimulus	GO:0005515|protein binding	GO:0005635|nuclear envelope GO:0005737|cytoplasm GO:0005783|endoplasmic reticulum GO:0005886|plasma membrane
pt2_01576	B	B1S	Potri.001G151900	Potri.001G151900(BS)	POPTR_0001s15190	sp|O00311|CDC7_HUMAN	Cell division cycle 7-related protein kinase OS=Homo sapiens GN=CDC7 PE=1 SV=1	AT4G16970.1	| Symbols: | Protein kinase superfamily protein | chr4:9551516-9555766 REVERSE LENGTH=889	LOC_Os10g41390.1	protein|protein kinase domain containing protein, expressed	IMGA|Medtr5g008860.1	hypothetical protein chr5 1727811-1731359 H EGN_Mt100125 20111014	GO:0006468|protein phosphorylation GO:0045727|positive regulation of translation GO:0046777|protein autophosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups	GO:0005575|cellular_component GO:0005634|nucleus
pt2_01577	B	B1S	Potri.001G152000	Potri.001G152000(BS)	POPTR_0001s15200	sp|Q9SHC8|VAP12_ARATH	Vesicle-associated protein 1-2 OS=Arabidopsis thaliana GN=PVA12 PE=1 SV=1	AT2G45140.1	| Symbols: PVA12 | plant VAP homolog 12 | chr2:18611029-18612971 FORWARD LENGTH=239	LOC_Os08g06020.1	protein|MSP domain containing protein, expressed	IMGA|Medtr5g012420.1	Vesicle-associated membrane protein chr5 3477683-3474442 F EGN_Mt100125 20111014	GO:0006499|N-terminal protein myristoylation GO:0006605|protein targeting GO:0006623|protein targeting to vacuole GO:0006886|intracellular protein transport GO:0007030|Golgi organization GO:0007033|vacuole organization GO:0010359|regulation of anion channel activity GO:0016192|vesicle-mediated transport GO:0030968|endoplasmic reticulum unfolded protein response GO:0046482|para-aminobenzoic acid metabolic process GO:0046777|protein autophosphorylation GO:0046907|intracellular transport	GO:0005198|structural molecule activity GO:0005515|protein binding	GO:0000326|protein storage vacuole GO:0005634|nucleus GO:0005783|endoplasmic reticulum GO:0005789|endoplasmic reticulum membrane GO:0005829|cytosol GO:0005886|plasma membrane GO:0016021|integral to membrane
pt2_01578	C	C1S	Potri.001G152100	Potri.001G152100(CS)	sp|Q9LVU1|VAP21_ARATH	Vesicle-associated protein 2-1 OS=Arabidopsis thaliana GN=PVA21 PE=2 SV=1	AT5G47180.2	| Symbols: | Plant VAMP (vesicle-associated membrane protein) family protein | chr5:19161384-19163265 REVERSE LENGTH=220	LOC_Os10g40140.1	protein|MSP domain containing protein, expressed	IMGA|Medtr5g013320.2	Vesicle-associated membrane protein chr5 3948619-3952341 E EGN_Mt100125 20111014	GO:0006612|protein targeting to membrane GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010363|regulation of plant-type hypersensitive response	GO:0005198|structural molecule activity	GO:0005783|endoplasmic reticulum GO:0005886|plasma membrane
pt2_01579	A	A1S	Potri.001G152100	Potri.001G152100(AS)	POPTR_0001s15220	sp|Q9LVU1|VAP21_ARATH	Vesicle-associated protein 2-1 OS=Arabidopsis thaliana GN=PVA21 PE=2 SV=1	AT5G47180.2	| Symbols: | Plant VAMP (vesicle-associated membrane protein) family protein | chr5:19161384-19163265 REVERSE LENGTH=220	LOC_Os10g40140.1	protein|MSP domain containing protein, expressed	IMGA|Medtr5g013320.2	Vesicle-associated membrane protein chr5 3948619-3952341 E EGN_Mt100125 20111014	GO:0006612|protein targeting to membrane GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010363|regulation of plant-type hypersensitive response	GO:0005198|structural molecule activity	GO:0005783|endoplasmic reticulum GO:0005886|plasma membrane
pt2_01580	A	A1S	Potri.001G152100	Potri.001G152100(AS)	POPTR_0001s15220	sp|Q9LVU1|VAP21_ARATH	Vesicle-associated protein 2-1 OS=Arabidopsis thaliana GN=PVA21 PE=2 SV=1	AT5G47180.2	| Symbols: | Plant VAMP (vesicle-associated membrane protein) family protein | chr5:19161384-19163265 REVERSE LENGTH=220	LOC_Os10g40140.1	protein|MSP domain containing protein, expressed	IMGA|Medtr5g013320.2	Vesicle-associated membrane protein chr5 3948619-3952341 E EGN_Mt100125 20111014	GO:0006612|protein targeting to membrane GO:0009963|positive regulation of flavonoid biosynthetic process GO:0010363|regulation of plant-type hypersensitive response	GO:0005198|structural molecule activity	GO:0005783|endoplasmic reticulum GO:0005886|plasma membrane
pt2_01581	A	A1S	Potri.001G152200	Potri.001G152200(AS)	POPTR_0001s15230	sp|Q8W463|RK191_ARATH	50S ribosomal protein L19-1, chloroplastic OS=Arabidopsis thaliana GN=At4g17560 PE=2 SV=1	AT4G17560.1	| Symbols: | Ribosomal protein L19 family protein | chr4:9780343-9781752 FORWARD LENGTH=225	LOC_Os02g43600.1	protein|50S ribosomal protein L19, chloroplast precursor, putative, expressed	IMGA|Medtr5g013300.1	50S ribosomal protein L19 chr5 3935474-3938632 F EGN_Mt100125 20111014	GO:0006412|translation GO:0010267|production of ta-siRNAs involved in RNA interference GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0051607|defense response to virus	GO:0003735|structural constituent of ribosome	GO:0005622|intracellular GO:0005840|ribosome GO:0009507|chloroplast GO:0009570|chloroplast stroma GO:0009941|chloroplast envelope GO:0016020|membrane
pt2_01582	A	A1S	Potri.001G152300	Potri.001G152300(AS)	POPTR_0001s15240	sp|O23596|GLPT4_ARATH	Putative glycerol-3-phosphate transporter 4 OS=Arabidopsis thaliana GN=At4g17550 PE=2 SV=2	AT4G17550.1	| Symbols: | Major facilitator superfamily protein | chr4:9777938-9779738 REVERSE LENGTH=544	LOC_Os04g46880.2	protein|transporter, major facilitator family, putative, expressed	NA	NA	GO:0008643|carbohydrate transport GO:0015706|nitrate transport GO:0055062|phosphate ion homeostasis GO:0055085|transmembrane transport	GO:0005351|sugar:hydrogen symporter activity	GO:0005774|vacuolar membrane GO:0009507|chloroplast GO:0016021|integral to membrane
pt2_01583	A	A1S	Potri.001G152500	Potri.001G152500(AS)	POPTR_0001s15250	NA	NA	AT5G02890.1	| Symbols: | HXXXD-type acyl-transferase family protein | chr5:670207-671454 REVERSE LENGTH=353	LOC_Os02g43670.1	protein|transferase family protein, putative, expressed	IMGA|Medtr5g013270.1	Omega-hydroxypalmitate O-feruloyl transferase chr5 3922313-3923681 H EGN_Mt100125 20111014	NA	GO:0016740|transferase activity GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups	GO:0005575|cellular_component
pt2_01584	A	A1S	Potri.001G152600	Potri.001G152600(AS)	POPTR_0001s15260	sp|Q40412|ABA2_NICPL	Zeaxanthin epoxidase, chloroplastic OS=Nicotiana plumbaginifolia GN=ABA2 PE=1 SV=1	AT2G35660.1	| Symbols: CTF2A | FAD/NAD(P)-binding oxidoreductase family protein | chr2:14988499-14990320 FORWARD LENGTH=439	LOC_Os07g30960.1	protein|monooxygenase, putative, expressed	IMGA|Medtr5g013250.1	Zeaxanthin epoxidase chr5 3915609-3913151 E EGN_Mt100125 20111014	GO:0008152|metabolic process	GO:0004497|monooxygenase activity GO:0016491|oxidoreductase activity	GO:0005739|mitochondrion GO:0009507|chloroplast
pt2_01585	A	A1S	Potri.001G152700	Potri.001G152700(AS)	POPTR_0001s15270	NA	NA	AT2G35658.2	| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G16840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr2:14990592-14990906 REVERSE LENGTH=104	NA	NA	IMGA|Medtr5g013240.1	hypothetical protein chr5 3912369-3912748 H EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005575|cellular_component GO:0005634|nucleus GO:0009507|chloroplast
pt2_01586	B	B1S	Potri.001G152800	Potri.001G152800(BS)	POPTR_0001s15280	sp|Q05737|YPTM2_MAIZE	GTP-binding protein YPTM2 OS=Zea mays GN=YPTM2 PE=2 SV=1	AT1G02130.1	| Symbols: ATRAB1B, ARA5, ARA-5, ATRABD2A, RABD2A, RA-5 | RAS 5 | chr1:400350-401788 REVERSE LENGTH=203	LOC_Os01g08450.1	protein|ras-related protein, putative, expressed	IMGA|Medtr1g068730.1	Ras-like protein chr1 17072901-17066690 F EGN_Mt100125 20111014	GO:0006888|ER to Golgi vesicle-mediated transport GO:0007264|small GTPase mediated signal transduction GO:0015031|protein transport GO:0046686|response to cadmium ion	GO:0005525|GTP binding	GO:0000139|Golgi membrane GO:0005773|vacuole GO:0005794|Golgi apparatus GO:0005886|plasma membrane GO:0032588|trans-Golgi network membrane
pt2_01587	A	A1S	Potri.001G152900	Potri.001G152900(AS)	POPTR_0001s15285	sp|Q9M4P3|PP316_ARATH	Pentatricopeptide repeat-containing protein At4g16835, mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3	AT4G16835.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:9472763-9474803 FORWARD LENGTH=656	LOC_Os08g05750.1	protein|pentatricopeptide, putative, expressed	IMGA|Medtr5g008600.1	Pentatricopeptide repeat-containing protein chr5 1604164-1608184 H EGN_Mt100125 20111014	GO:0008150|biological_process	NA	GO:0005575|cellular_component GO:0005739|mitochondrion
pt2_01588	A	A2S	Potri.001G153000	Potri.001G153000(AS) Potri.003G081600(DS)	POPTR_0001s15290	NA	NA	AT4G17520.1	| Symbols: | Hyaluronan / mRNA binding family | chr4:9771496-9773313 FORWARD LENGTH=360	LOC_Os01g52390.1	protein|plasminogen activator inhibitor 1 RNA-binding protein, putative, expressed	NA	NA	GO:0008150|biological_process	GO:0003723|RNA binding	GO:0005634|nucleus GO:0005777|peroxisome GO:0005829|cytosol
pt2_01589	A	A1S	Potri.001G153100	Potri.001G153100(AS)	POPTR_0001s15300	sp|O23522|PLA14_ARATH	Phospholipase A1-Ibeta2, chloroplastic OS=Arabidopsis thaliana GN=At4g16820 PE=1 SV=2	AT4G16820.1	| Symbols: PLA-I{beta]2 | alpha/beta-Hydrolases superfamily protein | chr4:9467563-9469116 FORWARD LENGTH=517	LOC_Os02g43700.1	protein|triacylglycerol lipase like protein, putative, expressed	IMGA|Medtr5g013230.1	Lipase chr5 3909366-3911161 F EGN_Mt100125 20111014	GO:0006629|lipid metabolic process GO:0009693|ethylene biosynthetic process	GO:0004806|triglyceride lipase activity GO:0008970|phosphatidylcholine 1-acylhydrolase activity GO:0047714|galactolipase activity	GO:0009507|chloroplast
pt2_01590	A	A1S	Potri.001G153200	Potri.001G153200(AS)	POPTR_0001s15310	NA	NA	AT1G05380.2	| Symbols: | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein | chr1:1577231-1582190 FORWARD LENGTH=1138	LOC_Os07g07690.2	protein|PHD-finger domain containing protein, expressed	IMGA|Medtr1g072130.1	hypothetical protein chr1 17983341-17973773 H EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0008270|zinc ion binding	GO:0005634|nucleus
pt2_01591	A	A1S	Potri.001G153300	Potri.001G153300(AS)	POPTR_0001s15320	sp|Q54HG7|AUHM_DICDI	Methylglutaconyl-CoA hydratase, mitochondrial OS=Dictyostelium discoideum GN=auh PE=3 SV=1	AT4G16800.1	| Symbols: | ATP-dependent caseinolytic (Clp) protease/crotonase family protein | chr4:9454931-9457000 REVERSE LENGTH=301	LOC_Os02g43720.1	protein|enoyl-CoA hydratase/isomerase family protein, putative, expressed	IMGA|contig_53750_1.1	Fatty acid oxidation complex subunit alpha contig_53750 5019-50 E PREDN 20111014	GO:0006631|fatty acid metabolic process GO:0008152|metabolic process	GO:0003824|catalytic activity GO:0004300|enoyl-CoA hydratase activity	GO:0005739|mitochondrion
pt2_01592	A	A2S	Potri.001G153400	Potri.001G153400(AS) Potri.003G080900(BS)	POPTR_0001s15330	sp|Q8YXQ7|CARA_NOSS1	Carbamoyl-phosphate synthase small chain OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=carA PE=3 SV=1	AT3G27740.1	| Symbols: CARA | carbamoyl phosphate synthetase A | chr3:10281470-10283792 REVERSE LENGTH=430	LOC_Os02g47850.2	protein|class I glutamine amidotransferase, putative, expressed	NA	NA	GO:0001510|RNA methylation GO:0006164|purine nucleotide biosynthetic process GO:0006543|glutamine catabolic process GO:0009220|pyrimidine ribonucleotide biosynthetic process GO:0016036|cellular response to phosphate starvation GO:0070409|carbamoyl phosphate biosynthetic process	GO:0004088|carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity	GO:0005951|carbamoyl-phosphate synthase complex GO:0009507|chloroplast GO:0009570|chloroplast stroma
pt2_01593	A	A1S	Potri.001G153500	Potri.001G153500(AS)	POPTR_0001s15340	NA	NA	NA	NA	NA	NA	NA	NA	GO:0006511|ubiquitin-dependent protein catabolic process	GO:0004221|ubiquitin thiolesterase activity	GO:0005622|intracellular GO:0005829|cytosol GO:0009507|chloroplast
pt2_01594	A	A1S	Potri.001G153600	Potri.001G153600(AS)	POPTR_0001s15350	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01595	A	A1S	Potri.001G153800	Potri.001G153800(AS)	POPTR_0001s15360	sp|Q39202|RLK1_ARATH	G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 OS=Arabidopsis thaliana GN=RLK1 PE=2 SV=2	AT5G60900.1	| Symbols: RLK1 | receptor-like protein kinase 1 | chr5:24498467-24501494 REVERSE LENGTH=748	LOC_Os04g39930.1	protein|receptor-like protein kinase, putative, expressed	IMGA|Medtr5g013130.1	Kinase-like protein chr5 3871934-3874336 H EGN_Mt100125 20111014	GO:0000165|MAPK cascade GO:0006355|regulation of transcription, DNA-dependent GO:0006468|protein phosphorylation GO:0006612|protein targeting to membrane GO:0009617|response to bacterium GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway GO:0009867|jasmonic acid mediated signaling pathway GO:0010310|regulation of hydrogen peroxide metabolic process GO:0010363|regulation of plant-type hypersensitive response GO:0031348|negative regulation of defense response GO:0035304|regulation of protein dephosphorylation	GO:0004672|protein kinase activity GO:0004674|protein serine/threonine kinase activity GO:0004713|protein tyrosine kinase activity GO:0005524|ATP binding GO:0016301|kinase activity GO:0016772|transferase activity, transferring phosphorus-containing groups GO:0030246|carbohydrate binding	GO:0005886|plasma membrane
pt2_01596	A	A2S	Potri.001G153900	Potri.001G153900(AS) Potri.003G081100(DS)	POPTR_0001s15370	sp|Q94JU3|CSN7_ARATH	COP9 signalosome complex subunit 7 OS=Arabidopsis thaliana GN=CSN7 PE=1 SV=1	AT1G02090.3	| Symbols: FUS5, CSN7, COP15, ATCSN7 | Proteasome component (PCI) domain protein | chr1:388223-389568 REVERSE LENGTH=237	LOC_Os07g30840.3	protein|proteasome subunit, putative, expressed	NA	NA	GO:0009640|photomorphogenesis GO:0010387|signalosome assembly GO:0010388|cullin deneddylation GO:0016567|protein ubiquitination GO:0016571|histone methylation GO:0016579|protein deubiquitination GO:0045893|positive regulation of transcription, DNA-dependent	GO:0004708|MAP kinase kinase activity GO:0005515|protein binding	GO:0005634|nucleus GO:0005737|cytoplasm GO:0005829|cytosol GO:0008180|signalosome
pt2_01597	A	A1S	Potri.001G154000	Potri.001G154000(AS)	POPTR_0001s15380	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
pt2_01598	A	A1S	Potri.001G154100	Potri.001G154100(AS)	POPTR_0001s15390	sp|O80337|EF100_ARATH	Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana GN=ERF1A PE=1 SV=2	AT4G17500.1	| Symbols: ATERF-1, ERF-1 | ethylene responsive element binding factor 1 | chr4:9759405-9760211 FORWARD LENGTH=268	LOC_Os02g43790.1	protein|ethylene-responsive transcription factor, putative, expressed	IMGA|AC233556_27.1	Ethylene-responsive transcription factor AC233556.3 105457-106057 H EGN_Mt100125 20111014	GO:0002679|respiratory burst involved in defense response GO:0006355|regulation of transcription, DNA-dependent GO:0009414|response to water deprivation GO:0009723|response to ethylene stimulus GO:0009737|response to abscisic acid stimulus GO:0009738|abscisic acid mediated signaling pathway GO:0009873|ethylene mediated signaling pathway GO:0010200|response to chitin GO:0035556|intracellular signal transduction GO:0042538|hyperosmotic salinity response GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus GO:0005643|nuclear pore
pt2_01599	A	A1S	Potri.001G154200	Potri.001G154200(AS)	POPTR_0001s15400	sp|Q8VZ91|EF103_ARATH	Ethylene-responsive transcription factor 6 OS=Arabidopsis thaliana GN=ERF6 PE=2 SV=2	AT4G17490.1	| Symbols: ATERF6, ERF-6-6, ERF6 | ethylene responsive element binding factor 6 | chr4:9752973-9753821 REVERSE LENGTH=282	LOC_Os02g43820.1	protein|AP2 domain containing protein, expressed	IMGA|AC233556_27.1	Ethylene-responsive transcription factor AC233556.3 105457-106057 H EGN_Mt100125 20111014	GO:0002679|respiratory burst involved in defense response GO:0006355|regulation of transcription, DNA-dependent GO:0009409|response to cold GO:0009873|ethylene mediated signaling pathway GO:0010200|response to chitin GO:0035556|intracellular signal transduction GO:0045893|positive regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity	GO:0005634|nucleus
pt2_01600	A	A1S	Potri.001G154300	Potri.001G154300(AS)	POPTR_0001s15410	sp|Q8L7W2|NUDT8_ARATH	Nudix hydrolase 8 OS=Arabidopsis thaliana GN=NUDT8 PE=2 SV=2	AT5G47240.1	| Symbols: atnudt8, NUDT8 | nudix hydrolase homolog 8 | chr5:19183806-19185467 FORWARD LENGTH=369	LOC_Os04g46280.1	protein|hydrolase, NUDIX family, domain containing protein, expressed	NA	NA	GO:0009611|response to wounding	GO:0016787|hydrolase activity	GO:0005829|cytosol
pt2_01601	A	A2S	Potri.001G154400	Potri.001G154400(AS) Potri.003G080300(DS)	POPTR_0001s15420	sp|Q93VG8|PPDEX_ARATH	DeSI-like protein At4g17486 OS=Arabidopsis thaliana GN=At4g17486 PE=2 SV=1	AT5G47310.1	| Symbols: | PPPDE putative thiol peptidase family protein | chr5:19201325-19202674 FORWARD LENGTH=245	LOC_Os03g01130.2	protein|ethylene-responsive element-binding protein, putative, expressed	IMGA|Medtr5g013040.1	hypothetical protein chr5 3837813-3834899 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005737|cytoplasm
pt2_01602	A	A1S	Potri.001G154400	Potri.001G154400(AS)	POPTR_0001s15420	sp|Q93VG8|PPDEX_ARATH	DeSI-like protein At4g17486 OS=Arabidopsis thaliana GN=At4g17486 PE=2 SV=1	AT5G47310.1	| Symbols: | PPPDE putative thiol peptidase family protein | chr5:19201325-19202674 FORWARD LENGTH=245	LOC_Os03g01130.2	protein|ethylene-responsive element-binding protein, putative, expressed	IMGA|Medtr5g013040.1	hypothetical protein chr5 3837813-3834899 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005737|cytoplasm
pt2_01603	A	A1S	Potri.001G154400	Potri.001G154400(AS)	POPTR_0001s15420	sp|Q93VG8|PPDEX_ARATH	DeSI-like protein At4g17486 OS=Arabidopsis thaliana GN=At4g17486 PE=2 SV=1	AT5G47310.1	| Symbols: | PPPDE putative thiol peptidase family protein | chr5:19201325-19202674 FORWARD LENGTH=245	LOC_Os03g01130.2	protein|ethylene-responsive element-binding protein, putative, expressed	IMGA|Medtr5g013040.1	hypothetical protein chr5 3837813-3834899 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005737|cytoplasm
pt2_01604	A	A1S	Potri.001G154400	Potri.001G154400(AS)	POPTR_0001s15420	sp|Q93VG8|PPDEX_ARATH	DeSI-like protein At4g17486 OS=Arabidopsis thaliana GN=At4g17486 PE=2 SV=1	AT5G47310.1	| Symbols: | PPPDE putative thiol peptidase family protein | chr5:19201325-19202674 FORWARD LENGTH=245	LOC_Os03g01130.2	protein|ethylene-responsive element-binding protein, putative, expressed	IMGA|Medtr5g013040.1	hypothetical protein chr5 3837813-3834899 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0003674|molecular_function	GO:0005737|cytoplasm
pt2_01605	A	A1S	Potri.001G154500	Potri.001G154500(AS)	POPTR_0001s15430	sp|Q9SKK8|ATL22_ARATH	RING-H2 finger protein ATL22 OS=Arabidopsis thaliana GN=ATL22 PE=2 SV=2	AT2G25410.1	| Symbols: | RING/U-box superfamily protein | chr2:10814470-10815917 FORWARD LENGTH=377	LOC_Os01g02560.1	protein|Ser/Thr receptor-like kinase, putative, expressed	IMGA|Medtr5g013030.1	RING-H2 finger protein ATL1E chr5 3833770-3832345 F EGN_Mt100125 20111014	GO:0008150|biological_process	GO:0008270|zinc ion binding	GO:0005576|extracellular region
pt2_01606	A	A1S	Potri.001G154600	Potri.001G154600(AS)	POPTR_0001s15440	sp|Q20390|PPT1_CAEEL	Palmitoyl-protein thioesterase 1 OS=Caenorhabditis elegans GN=ppt-1 PE=2 SV=2	AT3G60340.2	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr3:22304395-22306389 FORWARD LENGTH=338	LOC_Os03g01150.1	protein|palmitoyl-protein thioesterase 1 precursor, putative, expressed	IMGA|Medtr5g013020.1	Palmitoyl-protein thioesterase chr5 3819826-3814736 F EGN_Mt100125 20111014	GO:0006464|cellular protein modification process	GO:0008474|palmitoyl-(protein) hydrolase activity	GO:0005773|vacuole GO:0005829|cytosol
pt2_01607	A	A1S	Potri.001G154600	Potri.001G154600(AS)	POPTR_0001s15440	sp|Q20390|PPT1_CAEEL	Palmitoyl-protein thioesterase 1 OS=Caenorhabditis elegans GN=ppt-1 PE=2 SV=2	AT3G60340.2	| Symbols: | alpha/beta-Hydrolases superfamily protein | chr3:22304395-22306389 FORWARD LENGTH=338	LOC_Os03g01150.1	protein|palmitoyl-protein thioesterase 1 precursor, putative, expressed	IMGA|Medtr5g013020.1	Palmitoyl-protein thioesterase chr5 3819826-3814736 F EGN_Mt100125 20111014	GO:0006464|cellular protein modification process	GO:0008474|palmitoyl-(protein) hydrolase activity	GO:0005773|vacuole GO:0005829|cytosol
pt2_01608	A	A1S	Potri.001G154700	Potri.001G154700(AS)	POPTR_0001s15460	sp|Q9ZQP1|DSP8_ARATH	Putative dual specificity protein phosphatase DSP8 OS=Arabidopsis thaliana GN=DSP8 PE=2 SV=2	AT2G35680.1	| Symbols: | Phosphotyrosine protein phosphatases superfamily protein | chr2:14997004-14998590 REVERSE LENGTH=337	LOC_Os10g41240.1	protein|dual specificity protein phosphatase, putative, expressed	NA	NA	GO:0006470|protein dephosphorylation GO:0007243|intracellular protein kinase cascade GO:0016311|dephosphorylation GO:0043407|negative regulation of MAP kinase activity GO:0046855|inositol phosphate dephosphorylation	GO:0004439|phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity GO:0004725|protein tyrosine phosphatase activity GO:0008138|protein tyrosine/serine/threonine phosphatase activity GO:0016791|phosphatase activity	GO:0005737|cytoplasm
pt2_01609	A	A1S	Potri.001G154900	Potri.001G154900(AS)	POPTR_0001s15470	sp|Q9LVS3|PP422_ARATH	Pentatricopeptide repeat-containing protein At5g47360 OS=Arabidopsis thaliana GN=At5g47360 PE=2 SV=1	AT5G47360.1	| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:19214445-19215878 REVERSE LENGTH=477	LOC_Os03g12430.1	protein|PPR repeat containing protein, putative, expressed	IMGA|Medtr5g007250.1	Pentatricopeptide repeat-containing protein chr5 1020898-1025108 H EGN_Mt100125 20111014	NA	NA	GO:0005739|mitochondrion
pt2_01610	A	A1S	Potri.001G155000	Potri.001G155000(AS)	POPTR_0001s15480	NA	NA	AT4G16790.1	| Symbols: | hydroxyproline-rich glycoprotein family protein | chr4:9451747-9453168 REVERSE LENGTH=473	LOC_Os04g46330.1	protein|expressed protein	NA	NA	NA	NA	GO:0005634|nucleus
pt2_01611	A	A1S	Potri.001G155100	Potri.001G155100(AS)	POPTR_0001s15490	sp|Q05466|HAT4_ARATH	Homeobox-leucine zipper protein HAT4 OS=Arabidopsis thaliana GN=HAT4 PE=1 SV=1	AT4G16780.1	| Symbols: ATHB-2, HAT4, ATHB2, HB-2 | homeobox protein 2 | chr4:9449291-9450604 FORWARD LENGTH=284	LOC_Os04g46350.1	protein|homeobox associated leucine zipper, putative, expressed	IMGA|Medtr5g013010.1	Homeobox-leucine zipper protein HOX17 chr5 3801008-3802889 F EGN_Mt100125 20111014	GO:0006351|transcription, DNA-dependent GO:0006355|regulation of transcription, DNA-dependent GO:0009641|shade avoidance GO:0009733|response to auxin stimulus GO:0009734|auxin mediated signaling pathway GO:0009826|unidimensional cell growth GO:0045892|negative regulation of transcription, DNA-dependent	GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0043565|sequence-specific DNA binding	GO:0005634|nucleus
pt2_01612	A	A1S	Potri.001G155200	Potri.001G155200(AS)	POPTR_0001s15500	sp|Q84JU6|HOS1_ARATH	E3 ubiquitin-protein ligase HOS1 OS=Arabidopsis thaliana GN=HOS1 PE=1 SV=1	AT2G39810.1	| Symbols: HOS1 | ubiquitin-protein ligases | chr2:16612941-16617802 FORWARD LENGTH=927	LOC_Os03g52700.1	protein|expressed protein	IMGA|Medtr5g012940.1	E3 ubiquitin-protein ligase HOS1 chr5 3770397-3763119 H EGN_Mt100125 20111014	GO:0006306|DNA methylation GO:0006342|chromatin silencing GO:0006346|methylation-dependent chromatin silencing GO:0006355|regulation of transcription, DNA-dependent GO:0007267|cell-cell signaling GO:0009409|response to cold GO:0009616|virus induced gene silencing GO:0009640|photomorphogenesis GO:0009793|embryo development ending in seed dormancy GO:0009845|seed germination GO:0009909|regulation of flower development GO:0009933|meristem structural organization GO:0010162|seed dormancy process GO:0010182|sugar mediated signaling pathway GO:0010228|vegetative to reproductive phase transition of meristem GO:0010267|production of ta-siRNAs involved in RNA interference GO:0010388|cullin deneddylation GO:0016246|RNA interference GO:0016567|protein ubiquitination GO:0016571|histone methylation GO:0016579|protein deubiquitination GO:0019915|lipid storage GO:0035196|production of miRNAs involved in gene silencing by miRNA GO:0043687|post-translational protein modification GO:0045892|negative regulation of transcription, DNA-dependent GO:0045893|positive regulation of transcription, DNA-dependent GO:0050826|response to freezing	GO:0004842|ubiquitin-protein ligase activity	GO:0005634|nucleus GO:0005737|cytoplasm
pt2_01613	A	A2S	Potri.001G155300	Potri.001G155300(AS) Potri.003G079500(DS)	POPTR_0001s15510	sp|Q2V9B0|MY1R1_SOLTU	Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1	AT5G47390.1	| Symbols: | myb-like transcription factor family protein | chr5:19227001-19228546 FORWARD LENGTH=365	LOC_Os10g41200.1	protein|MYB family transcription factor, putative, expressed	IMGA|Medtr5g037080.1	DIV1B protein chr5 15763383-15765765 F EGN_Mt100125 20111014	GO:0006355|regulation of transcription, DNA-dependent GO:0009651|response to salt stress GO:0009723|response to ethylene stimulus GO:0009737|response to abscisic acid stimulus GO:0009739|response to gibberellin stimulus GO:0009751|response to salicylic acid stimulus GO:0009753|response to jasmonic acid stimulus GO:0046686|response to cadmium ion	GO:0003676|nucleic acid binding GO:0003677|DNA binding GO:0003700|sequence-specific DNA binding transcription factor activity GO:0008270|zinc ion bindin